HHsearch alignment for GI: 254780153 and conserved domain: PRK05965
>PRK05965 hypothetical protein; Provisional.
Probab=99.28 E-value=1.7e-08 Score=73.39 Aligned_cols=332 Identities=11% Similarity=0.021 Sum_probs=172.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH---HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CCC-CC-C
Q ss_conf 96899998632103653289889---9999999999999968899857999748734899987532------057-89-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG---KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LLG-YR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f---~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~~-~~-~ 92 (391)
T Consensus 64 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~~la~~L~~~~--p~~l~~v~f~~SGSEAvE~AlKlar~y~~a~g~~~r~ 140 (459)
T PRK05965 64 QES-IVEAAAKQMRKLPYATGYFHFGSEPAIRLAAELAERA--PGSLNHVYFTLGGSDAVDSAVRFITHYWNATGRPSKK 140 (459)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 799-9999999997567735665668669999999999857--8886879984867999999999999999972799875
Q ss_pred EEEEEECCHHHHHHHHH--------HH-CCC--CCEEEEEC------CCCCCCC------HHHC----C--CCCCEEEEE
Q ss_conf 07997073688888765--------32-387--63067405------7776578------6767----8--556579974
Q gi|254780153|r 93 VDVLAWESFGLGWMSDI--------RQ-LSL--QDVREFTA------PYGSLPD------FSKV----D--FDRDVVFVW 143 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~--------~~-~~~--~~~~~~~~------~~g~~~~------~~~~----~--~~~~v~~~h 143 (391)
T Consensus 141 ~ii~~~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~vAAvi 220 (459)
T PRK05965 141 QFIALERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNPVGDDPQAIIAASVAALEAKVAELGADNVAAFF 220 (459)
T ss_pred EEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 79997178589974310257774322356899998623578865568788977889999999999999861887579999
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf 202420---22032------035025686148864011011025---4--5568579997001200176-6515445677
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP 208 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~ 208 (391)
T Consensus 221 ~EPi~g~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgL~gG~~Plsav~~~~ 300 (459)
T PRK05965 221 CEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSD 300 (459)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECH
T ss_conf 54644668853287688799999987569179983054177624474100366618888887343457867516897648
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
T Consensus 301 ~i~~~~~~~~~~~---------------~~~~hg~T~~gnpla~-Aaa~a~L~~l~~~-~---l~~~~~~~g~~l~~~L~ 360 (459)
T PRK05965 301 HVYQGIADGAGAA---------------APVGHGYTYSAHPVSA-AVGLEVLRLYHEG-G---LLANGQAAAPRFAAGLD 360 (459)
T ss_pred HHHHHHHCCCCCC---------------CCCCCCCCCCCCHHHH-HHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHH
T ss_conf 9998761156656---------------5445677899898999-9999999999863-4---99999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf 47971676688200365317898247310113734567888999998886282872665567675056861588899999
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL 368 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv 368 (391)
T Consensus 361 ~L~~-~p~i~dVRG~GLm~gielv~d~~~-~~~~~~~~~~~~~i~~~~~~~Glli~~~g----~~vl~l~PPL~It~~ei 434 (459)
T PRK05965 361 ALRA-HPLVGDVRGRGLLGALELVADKAS-KTPFDAALEPADRIFDRAYANGLVFRAFG----DGVLGFAPALCCTEGEF 434 (459)
T ss_pred HHHC-CCCEEEEEECCEEEEEEEECCCCC-CCCCCHHHHHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHHH
T ss_conf 8764-997686782562799997126544-66775547999999999996992998079----99899978820899999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999
Q gi|254780153|r 369 LLLCDWLRWVFYFQKI 384 (391)
Q Consensus 369 ~~L~~aLe~~~~~~k~ 384 (391)
T Consensus 435 d~~~~~l~~al~evl~ 450 (459)
T PRK05965 435 DLIFERTRKTLDDVLA 450 (459)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999985