HHsearch alignment for GI: 254780153 and conserved domain: PRK07366
>PRK07366 succinyldiaminopimelate transaminase; Validated.
Probab=99.06 E-value=1.2e-06 Score=61.66 Aligned_cols=319 Identities=12% Similarity=0.072 Sum_probs=167.6
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHCCC-CCCC-C--HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHH
Q ss_conf 886888776-8968999986321036-5328-9--88999999999999999688998--57999748734899987532
Q gi|254780153|r 14 PFFSSGPCA-KRPGWSLGILEGALLG-RSHR-C--VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 14 ~~F~pGP~~-~~p~~v~~~~~~~~l~-~sHR-s--~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~n 86 (391)
T Consensus 33 i~l~iG~pdf~~P~~i~~a~~~a~~~~~~~gY~~~~G~~~lR~aIa~~~~~~~g~~~~pe~~V-~~t~G~~~al~~~~~a 111 (388)
T PRK07366 33 IDLSLGSSDLPAPAHALEAIAQSLQDPSTHGYLLFHGTLPFREAAAAWYEQRFGLAVDPETEV-LPLIGSQEGTAHLPLA 111 (388)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHH
T ss_conf 987086899998899999999998097676789875789999999999999978988988739-9847889999999999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE---
Q ss_conf 0578970799707368888876532387630674--05777657867678-----5565799742024202203203---
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~--- 156 (391)
T Consensus 112 l~~pGD~Vli~~P~Y~~y-~~~~~~~G-~~~~~vpl~~~~~~~~d~~~l~~~i~~~tk~iil~~P~NPTG~v~s~~~l~~ 189 (388)
T PRK07366 112 LLNPGDFALLLDPGYPSH-AGGVYLAG-GQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQE 189 (388)
T ss_pred HCCCCCEEEEECCCCCCH-HHHHHHCC-CEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEHHHHHH
T ss_conf 669999899825877651-89999859-8579975466679847999998740422829998589898466803888888
Q ss_pred --EECCCCCCEEEEEECCH---HHH-CC------CCCC-CCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCC
Q ss_conf --50256861488640110---110-25------4556-8579997001200176651--54456778887654114457
Q gi|254780153|r 157 --FIPESREGLVICDATSA---VFA-RH------IDFN-KLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSW 221 (391)
Q Consensus 157 --~~~~~~~~llivD~vSs---~g~-~p------~d~~-~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~ 221 (391)
T Consensus 190 i~~~a~~~~i~lisDEiY~~l~~~~~~~~p~~~~~~~~~~~~i~~~S~SK~f~~-~G~RiG~~i~~~~li~~~~~~~~~- 267 (388)
T PRK07366 190 AVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNM-GGFRIGFAIGNAQLIAALRQIKAV- 267 (388)
T ss_pred HHHHHHHCCEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCC-CCCEEEEEECCHHHHHHHHHHHHH-
T ss_conf 999874055078622021445866876661354257220617997335325788-765189996799999999999875-
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
T Consensus 268 ----------------------~~~~~~~~~~~~a~~al~~--~~~~~~~~~~~~~~rr~~~~~~L~~~g-~~~~--~P~ 320 (388)
T PRK07366 268 ----------------------VDFNQYRGILNGAIAALTG--PQACVQQTVQIFRQRRDAFINALHRIG-WPVP--LPE 320 (388)
T ss_pred ----------------------CCCCCHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEE--CCC
T ss_conf ----------------------4765439999999999968--889999999999999999999999779-8750--798
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 0365317898247310113734567888999998886282872665-5676750-5686158889999999999999
Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
T Consensus 321 --g~~y~w~~l~~~~~--~~---~~ef---~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~~a~--~~~~l~eal~Rl~ 385 (388)
T PRK07366 321 --ATMYVWAKLPEPWQ--GN---SVEF---CTQLVAQTGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIA 385 (388)
T ss_pred --EEEEEEEECCCCCC--CC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEECC--CHHHHHHHHHHHH
T ss_conf --57799787898788--99---8999---99999839999976646588999869999629--9999999999999