HHsearch alignment for GI: 254780153 and conserved domain: PRK08637
>PRK08637 hypothetical protein; Provisional.
Probab=98.56 E-value=8.3e-05 Score=49.95 Aligned_cols=296 Identities=16% Similarity=0.141 Sum_probs=144.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688888765323876306740-
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT- 121 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~- 121 (391)
T Consensus 46 ~p~~~~~~~~~~~~~~~~~-~~~~~~~~v~T~Ggt~al~~~~~~~~~~gd~Vlip~P~W~ny~-~i~~~~~G~~v~~y~~ 123 (386)
T PRK08637 46 IEELRDLWQQKMLRDNPSL-SGKNMSLPIVTNALTHGLSLVADLFVNQGDTVLLPDHNWGNYK-LVFNTRNGANLQTYPI 123 (386)
T ss_pred CHHHHHHHHHHHHCCCCHH-HHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHH-HHHHHHCCCCEEEEEE
T ss_conf 2999999999983679211-1126466687574689999999998479998999179854179-9999837984167742
Q ss_pred -CCCCCCCCHHH----C---CCCCCEEEEEE--ECCCCEEECCEEE-----ECCC-----CCCEEEEEECC-HHHHCC--
Q ss_conf -57776578676----7---85565799742--0242022032035-----0256-----86148864011-011025--
Q gi|254780153|r 122 -APYGSLPDFSK----V---DFDRDVVFVWN--GTTSGVCVPDVGF-----IPES-----REGLVICDATS-AVFARH-- 178 (391)
Q Consensus 122 -~~~g~~~~~~~----~---~~~~~v~~~h~--ETstGv~~~~~~~-----~~~~-----~~~llivD~vS-s~g~~p-- 178 (391)
T Consensus 124 ~~~~~~-~~~~~~~~~l~~~~~~~~vvll~n~phNPTG~~~t~ee~~~i~~~~~~~~~~g~~i~~i~D~aY~~~~~~~~~ 202 (386)
T PRK08637 124 FDKDGH-FTTDALVEALQAAYNKDKVILILNFPNNPTGYTPTHKEVTTIVEAIKALADKGTKVIAVVDDAYYGLFYEDVY 202 (386)
T ss_pred ECCCCC-CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCC
T ss_conf 646789-7819999999845778838999878999888689999999999999987733888899996014566308843
Q ss_pred -------C-CC-CCC-EEEEECCHHCCCCCCCCE--EE---EECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCC
Q ss_conf -------4-55-685-799970012001766515--44---567788876541144577831232001123210334786
Q gi|254780153|r 179 -------I-DF-NKL-DVVTFSAQKVLGGEAGFG--II---ILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE 243 (391)
Q Consensus 179 -------~-d~-~~i-Dv~~a~sQK~l~~ppGl~--~v---~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (391)
T Consensus 203 ~~~~~~~~~~~~~~~~~i~~~s~SK~~~m-yG~RvG~l~~~~~~~~~~~~~~~---------------~~~~---~-~r~ 262 (386)
T PRK08637 203 KESLFTALANLHSNILAVKLDGATKEFFA-WGFRVGFITFGTSDQTTKEVLEA---------------KVKG---L-IRS 262 (386)
T ss_pred CCHHHHHHHCCCCCEEEEEECCCCCCCCC-CCCCEEEEEEECCCHHHHHHHHH---------------HHHH---H-HHC
T ss_conf 22499986215776489996131012557-00231578860598999999999---------------9999---9-860
Q ss_pred CCCCCCHHHHHHHHHHHHHHH---CC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 446664488999999998620---10--3189999999977999999987479716766882003653178982473101
Q gi|254780153|r 244 TINTPSLLCIEDYIDALLWLK---KM--GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391)
Q Consensus 244 ~~~TP~v~~i~al~~~l~~i~---~~--gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391)
T Consensus 263 ~~Snpp~~gq~~~~~~L~~~~~~~~e~~e~~~~m~~R~~~~~~~l~~~~~~-~~~~~~p~----~~G~F~~i~~~~~--- 334 (386)
T PRK08637 263 NISSGPHPSQSAVLHVLKNPDQFDKEIEQKIQILKERYEVTKEVVYDDQYD-DHWQAYPF----NSGYFMCLKLKDV--- 334 (386)
T ss_pred CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCC----CCEEEEEECCCCC---
T ss_conf 448856899999999975908899999999999999999999997420435-68632456----7615886479989---
Q ss_pred CCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 1373456788899999-8886282872665567675056861588899999999999999999999
Q gi|254780153|r 319 SLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
T Consensus 335 --~-------~e~l~~~Lle~~~V~~v-~~g---~~~iRIs~a-als~~nI~~~~~~I~~al~~Lk 386 (386)
T PRK08637 335 --D-------AEELRVHLLEKYGIGVI-ALN---ETDLRIAFS-CVEEEDIPHVFDSIAKAIDDLR 386 (386)
T ss_pred --C-------HHHHHHHHHHCCCEEEE-ECC---CCCEEEEEE-ECCHHHHHHHHHHHHHHHHHCC
T ss_conf --9-------99999999863958999-559---997799998-5889999999999999998539