HHsearch alignment for GI: 254780153 and conserved domain: PRK08960

>PRK08960 hypothetical protein; Provisional.
Probab=98.90  E-value=7e-06  Score=56.77  Aligned_cols=323  Identities=14%  Similarity=0.072  Sum_probs=165.7

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCC
Q ss_conf             8868887768-968999986321036-532898--8999999999999999688998-5799974873489998753205
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLL   88 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~   88 (391)
T Consensus        35 i~l~~G~pdf~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~d~I-~vt~G~~~al~~~~~~l~  113 (387)
T PRK08960         35 IHLEIGEPDFTTAAPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGLDVDPERI-LVTPGGSGALLLASSLLV  113 (387)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHE-EECCCHHHHHHHHHHHHC
T ss_conf             7889948999889999999999985389988998772999999999999985899984328-980866999999999956


Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----E
Q ss_conf             7897079970736888887653238763067-4057776578676785-----565799742024202203203-----5
Q gi|254780153|r   89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----F  157 (391)
Q Consensus        89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~  157 (391)
T Consensus       114 ~pGD~Vlv~~P~Yp~~~-~~~~~~~~~~~~vp~~~~~~~~~~~~~le~~~~~~~~~iil~nP~NPTG~v~s~~~l~~l~~  192 (387)
T PRK08960        114 DPGKHWLLADPGYPCNR-HFLRLVEGAAQLVPVGPDTRYQLTPALVERHWDSDSVGALVASPANPTGTLLSRDELAALSQ  192 (387)
T ss_pred             CCCCEEEEECCCCCCHH-HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf             99987998178765528-99998537449997575447788999999727878729997689898863146899999999


Q ss_pred             ECCCCCCEEEEEECCHHHHCC------CCCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             025686148864011011025------4556857999700120017665--15445677888765411445778312320
Q gi|254780153|r  158 IPESREGLVICDATSAVFARH------IDFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       158 ~~~~~~~llivD~vSs~g~~p------~d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
T Consensus       193 ~a~~~~~~vI~DEiY~~l~~~~~~~s~~~~~~~~i~i~S~SK~~~~-~G~RiG~~v~p~~~i~~~~~~~~----------  261 (387)
T PRK08960        193 ALKARGGHLVVDEIYHGLTYGVDAASVLEVDDSAFVLNSFSKYFGM-TGWRLGWLVAPPAAVPELEKLAQ----------  261 (387)
T ss_pred             HHHHCCCEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC-CCCEEEEEEECHHHHHHHHHHHH----------
T ss_conf             8762397799844614412589865311367877999506432557-76305899988999999999998----------


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf             01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC  309 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~  309 (391)
T Consensus       262 -------------~~~~~~~~~~Q~aa~~al~~-~~~~~~~~~~~~~~~rrd~l~~~l~~~~~~~~~--~P~--G~~y~w  323 (387)
T PRK08960        262 -------------NLYISASSMAQHAALACFEP-ETIAILEARRAEFQRRRDFLLPALRELGFGIAV--EPQ--GAFYLY  323 (387)
T ss_pred             -------------HCCCCCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCC--EEEEEE
T ss_conf             -------------54377987999999999621-559999999999999999999999975996045--898--666997


Q ss_pred             EEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC--CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9824731011373456788899999-8886282872665--567675-05686158889999999999999999
Q gi|254780153|r  310 MKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS--YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       310 ~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~--~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
T Consensus       324 ~~~~~~~---~d-------~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~~Rls~~~--~~~~l~eal~RL~~~L  385 (387)
T PRK08960        324 ADISAFG---GD-------AFAFCRHFLETEHVAFTPGLDFGRHQAGHHVRFAYTQ--SLPRLQEAVERIARGL  385 (387)
T ss_pred             EECCCCC---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHH
T ss_conf             8888889---99-------9999999998699999747220899999989999769--9999999999999996