HHsearch alignment for GI: 254780153 and conserved domain: PRK08960
>PRK08960 hypothetical protein; Provisional.
Probab=98.90 E-value=7e-06 Score=56.77 Aligned_cols=323 Identities=14% Similarity=0.072 Sum_probs=165.7
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCC
Q ss_conf 8868887768-968999986321036-532898--8999999999999999688998-5799974873489998753205
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLL 88 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~ 88 (391)
T Consensus 35 i~l~~G~pdf~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~d~I-~vt~G~~~al~~~~~~l~ 113 (387)
T PRK08960 35 IHLEIGEPDFTTAAPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGLDVDPERI-LVTPGGSGALLLASSLLV 113 (387)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHE-EECCCHHHHHHHHHHHHC
T ss_conf 7889948999889999999999985389988998772999999999999985899984328-980866999999999956
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----E
Q ss_conf 7897079970736888887653238763067-4057776578676785-----565799742024202203203-----5
Q gi|254780153|r 89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----F 157 (391)
Q Consensus 89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~ 157 (391)
T Consensus 114 ~pGD~Vlv~~P~Yp~~~-~~~~~~~~~~~~vp~~~~~~~~~~~~~le~~~~~~~~~iil~nP~NPTG~v~s~~~l~~l~~ 192 (387)
T PRK08960 114 DPGKHWLLADPGYPCNR-HFLRLVEGAAQLVPVGPDTRYQLTPALVERHWDSDSVGALVASPANPTGTLLSRDELAALSQ 192 (387)
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 99987998178765528-99998537449997575447788999999727878729997689898863146899999999
Q ss_pred ECCCCCCEEEEEECCHHHHCC------CCCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 025686148864011011025------4556857999700120017665--15445677888765411445778312320
Q gi|254780153|r 158 IPESREGLVICDATSAVFARH------IDFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 158 ~~~~~~~llivD~vSs~g~~p------~d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
T Consensus 193 ~a~~~~~~vI~DEiY~~l~~~~~~~s~~~~~~~~i~i~S~SK~~~~-~G~RiG~~v~p~~~i~~~~~~~~---------- 261 (387)
T PRK08960 193 ALKARGGHLVVDEIYHGLTYGVDAASVLEVDDSAFVLNSFSKYFGM-TGWRLGWLVAPPAAVPELEKLAQ---------- 261 (387)
T ss_pred HHHHCCCEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC-CCCEEEEEEECHHHHHHHHHHHH----------
T ss_conf 8762397799844614412589865311367877999506432557-76305899988999999999998----------
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
T Consensus 262 -------------~~~~~~~~~~Q~aa~~al~~-~~~~~~~~~~~~~~~rrd~l~~~l~~~~~~~~~--~P~--G~~y~w 323 (387)
T PRK08960 262 -------------NLYISASSMAQHAALACFEP-ETIAILEARRAEFQRRRDFLLPALRELGFGIAV--EPQ--GAFYLY 323 (387)
T ss_pred -------------HCCCCCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCC--EEEEEE
T ss_conf -------------54377987999999999621-559999999999999999999999975996045--898--666997
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC--CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9824731011373456788899999-8886282872665--567675-05686158889999999999999999
Q gi|254780153|r 310 MKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS--YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~--~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
T Consensus 324 ~~~~~~~---~d-------~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~~Rls~~~--~~~~l~eal~RL~~~L 385 (387)
T PRK08960 324 ADISAFG---GD-------AFAFCRHFLETEHVAFTPGLDFGRHQAGHHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred EECCCCC---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHH
T ss_conf 8888889---99-------9999999998699999747220899999989999769--9999999999999996