HHsearch alignment for GI: 254780153 and conserved domain: PRK13355

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional.
Probab=97.30  E-value=0.015  Score=35.62  Aligned_cols=279  Identities=15%  Similarity=0.127  Sum_probs=141.5

Q ss_pred             EEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEE
Q ss_conf             79997487348999875320578970799707368888876532387630674-057776578676785-----565799
Q gi|254780153|r   68 RIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVF  141 (391)
Q Consensus        68 ~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~  141 (391)
T Consensus       210 di~~-gnGvSE~i~~am~Alln~GDeVLiP~P~YPl-yta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT~kTKAIVI  287 (518)
T PRK13355        210 DIYT-GNGVSELINLSMSALLDDGDEVLVPSPDYPL-WTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKITSKTKAIVI  287 (518)
T ss_pred             HEEE-CCCHHHHHHHHHHHHCCCCCEEEECCCCCCC-HHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf             3565-4776799999999836899989825999977-8999886098788987452217788999998535715579999


Q ss_pred             EEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHHHC----CCCC-----CCCEEEEECCHHCCCCCCCCEEE--E
Q ss_conf             742024202203203-----502568614886401101102----5455-----68579997001200176651544--5
Q gi|254780153|r  142 VWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVFAR----HIDF-----NKLDVVTFSAQKVLGGEAGFGII--I  205 (391)
Q Consensus       142 ~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g~~----p~d~-----~~iDv~~a~sQK~l~~ppGl~~v--~  205 (391)
T Consensus       288 nNPNNPTGAVyS~E~LeeIaeiArehdLiIISDEIY~~LvYDg~~h~Siasla~d~~~It~NG~SKsya-MtGWRiGwmv  366 (518)
T PRK13355        288 INPNNPTGALYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM-IAGFRAGWMM  366 (518)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCEE-CCEEEEEEEE
T ss_conf             689898887889999999999999859699962302210068986304767088645999887766633-2201136654


Q ss_pred             ECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             677-8887654114457783123200112321033478644666448899999999862010318999999997799999
Q gi|254780153|r  206 LSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLF  284 (391)
Q Consensus       206 ~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~  284 (391)
T Consensus       367 ~sG~~~~a~-----------~~Ie~---l~~L-----as~~lcsnvpaQ~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~  427 (518)
T PRK13355        367 LSGNKRHAK-----------DYIEG---LNML-----ANMRMCSNVPAQSVVQTALGGHQSVKDYTVPGGRLYDQRELVY  427 (518)
T ss_pred             ECCCHHHHH-----------HHHHH---HHHH-----HHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             248589999-----------99999---9998-----6045663689999999986287648999999999999999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCCEEEEECCCC
Q ss_conf             998747971676688200365317898247310113734567888999998886282872665--567675056861588
Q gi|254780153|r  285 QFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPLGLRVWVGVT  362 (391)
Q Consensus       285 ~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~~~RIg~~g~  362 (391)
T Consensus       428 e~Ln~IpGvscvkP~GAF-----YlFPkID~~~--~~i~dDeeFa---l~LL~Ee~VlVVPGsaFG~~~pghfRIsyap-  496 (518)
T PRK13355        428 DMLNAIPGISAVKPKAAF-----YIFPKIDVKI--FNIHSDEQFA---LDLLHEKHILISHGGAFNWDKPDHFRVVYLP-  496 (518)
T ss_pred             HHHHCCCCCEECCCCEEE-----EEEEECCCCC--CCCCCHHHHH---HHHHHHCCEEEECCCCCCCCCCCEEEEEECC-
T ss_conf             998359997658998158-----9955415344--8998999999---9999858999958754489998979999279-


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q ss_conf             899999999999999999
Q gi|254780153|r  363 VEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       363 i~~~dv~~L~~aLe~~~~  380 (391)
T Consensus       497 -s~e~L~EA~~RI~~FL~  513 (518)
T PRK13355        497 -RLGMLEETMDELDDFFS  513 (518)
T ss_pred             -CHHHHHHHHHHHHHHHH
T ss_conf             -99999999999999999