HHsearch alignment for GI: 254780153 and conserved domain: PRK13578

>PRK13578 ornithine decarboxylase; Provisional.
Probab=97.78  E-value=0.0035  Score=39.66  Aligned_cols=302  Identities=11%  Similarity=0.012  Sum_probs=143.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHCCCCCEEEEE---CCC
Q ss_conf             999999999999688998579997487348999875320578970799-7073688888765323876306740---577
Q gi|254780153|r   49 RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL-AWESFGLGWMSDIRQLSLQDVREFT---APY  124 (391)
Q Consensus        49 i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~-~~g~~~~r~~~~~~~~~~~~~~~~~---~~~  124 (391)
T Consensus       175 ~~~eAq~~AA~~FGAD~---TyFvvNGTS~~nk~v~~a~~~pGD~VLvdRN~HKSv~~G--ALIlsGA~PVYl~p~rN~~  249 (720)
T PRK13578        175 AAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG--ALIQAGATPVYLETARNPF  249 (720)
T ss_pred             CHHHHHHHHHHHHCCCE---EEEEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH--HHHHCCCEEEEECCCCCCC
T ss_conf             44799999999849982---699957710889999997458999999656435777778--8986697679966646756


Q ss_pred             CCC--CCH-----H----HC--------CC--CCCEEEEEEECCCCEEECCEEEE---CCCCCCEEEEEECCHHHH---C
Q ss_conf             765--786-----7----67--------85--56579974202420220320350---256861488640110110---2
Q gi|254780153|r  125 GSL--PDF-----S----KV--------DF--DRDVVFVWNGTTSGVCVPDVGFI---PESREGLVICDATSAVFA---R  177 (391)
Q Consensus       125 g~~--~~~-----~----~~--------~~--~~~v~~~h~ETstGv~~~~~~~~---~~~~~~llivD~vSs~g~---~  177 (391)
T Consensus       250 GiiggI~~~~f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~TYdGi~yn~~~I~~~i~~~~~-~ilfDEAw-~~~~~F~  327 (720)
T PRK13578        250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAIIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAW-VGYEQFI  327 (720)
T ss_pred             CEECCCCHHHCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHCC-EEEEECCH-HHHHHCC
T ss_conf             511674857527577898887436333123488618999468753542349999999864078-38985110-2144328


Q ss_pred             CC-----------CCCCCE-EEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCC
Q ss_conf             54-----------556857-999700120017665154456778887654114457783123200112321033478644
Q gi|254780153|r  178 HI-----------DFNKLD-VVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETI  245 (391)
Q Consensus       178 p~-----------d~~~iD-v~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (391)
T Consensus       328 P~~~d~~p~~l~~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI------~g~---~r~v~~~rfn~a~mm---h~--  393 (720)
T PRK13578        328 PMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHI------KGQ---ARYCPHKRFNNAFML---HA--  393 (720)
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCC------CCC---CCCCCHHHHHHHHHH---HC--
T ss_conf             5311246433345877765046630655544322221012245434------666---566788999999987---70--


Q ss_pred             CCCCHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCC------------------------
Q ss_conf             666448899-99999986201031899999999779999999874-7971676688------------------------
Q gi|254780153|r  246 NTPSLLCIE-DYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE-NDWIENLAVD------------------------  299 (391)
Q Consensus       246 ~TP~v~~i~-al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~-~~~~~~~~~~------------------------  299 (391)
T Consensus       394 STSPsY~L~ASLDv~A~m~~g~~G~-~L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w~~  472 (720)
T PRK13578        394 STSPFYPLFAALDVNAKMHEGESGR-RLWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSF  472 (720)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCC
T ss_conf             7880899999879999997312145-899999999999999998654442255752126860354888886125010246


Q ss_pred             ---C------------CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf             ---2------------0036531789824731011373456788899999888628287266556767505686158889
Q gi|254780153|r  300 ---E------------TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVE  364 (391)
Q Consensus       300 ---~------------~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~  364 (391)
T Consensus       473 ~Pg~~WHGf~g~~~~~~~lDP~Klti~tPGi~~~~g~~~~~GIpA~il~~yLre~gIvvEktdl~~IL--fL~T~G--~t  548 (720)
T PRK13578        473 EPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGVPATILANYLRENGIVPEKCDLNSIL--FLLTPA--ED  548 (720)
T ss_pred             CCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEE--EEECCC--CC
T ss_conf             88742246555576634226737998536745566542136875899999998769079854775079--997267--88


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  365 KEDLLLLCDWLR  376 (391)
Q Consensus       365 ~~dv~~L~~aLe  376 (391)
T Consensus       549 ~~k~~~Lv~aL~  560 (720)
T PRK13578        549 MAKLQQLVAMLA  560 (720)
T ss_pred             HHHHHHHHHHHH
T ss_conf             899999999999