HHsearch alignment for GI: 254780153 and conserved domain: TIGR00707
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636 This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=98.21 E-value=0.00056 Score=44.68 Aligned_cols=310 Identities=16% Similarity=0.126 Sum_probs=192.6
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCC----CCCEEEEECCCCHHHHHHHHHH---CC---C-CC
Q ss_conf 9689999863210365328988999-9999999999996889----9857999748734899987532---05---7-89
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVP----ENYRIAIVPASDTGAVEMALWS---LL---G-YR 91 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p----~~y~v~~l~GsgT~~~ea~~~n---l~---~-~~ 91 (391)
T Consensus 47 hP~-l~Ea~~~Q~~kL~H~SNlY~~~~~~~LA~kLv~~~~~dgGqhd~~rvFFCN-SGaEAnEAAlKlARk~~~~~g~~k 124 (402)
T TIGR00707 47 HPK-LVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGADGGQHDASRVFFCN-SGAEANEAALKLARKYTGDKGKEK 124 (402)
T ss_pred CHH-HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC-CHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 889-999999866240660776558089999999999970468830232667514-747899999999898640227886
Q ss_pred CEEEEEECCHHHHHHHHHHHCCCCCEEEEE---------CCCCC-CCCHHH-CCCC--CC-EEEEEEECCCC--EEECC-
Q ss_conf 707997073688888765323876306740---------57776-578676-7855--65-79974202420--22032-
Q gi|254780153|r 92 GVDVLAWESFGLGWMSDIRQLSLQDVREFT---------APYGS-LPDFSK-VDFD--RD-VVFVWNGTTSG--VCVPD- 154 (391)
Q Consensus 92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~---------~~~g~-~~~~~~-~~~~--~~-v~~~h~ETstG--v~~~~- 154 (391)
T Consensus 125 ~~ivaf~naFHGRT~g~LsaTgqpKy~~~F~PLvpgf~y~~yNDe~~~l~~~i~~~~eg~rtAAvivEpiQGEgGV~pa~ 204 (402)
T TIGR00707 125 KKIVAFENAFHGRTMGALSATGQPKYQKPFEPLVPGFKYVPYNDEIEALKEAIDDEKEGDRTAAVIVEPIQGEGGVVPAD 204 (402)
T ss_pred CEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC
T ss_conf 53888870776300454300477645685788423812444889789999985025778718899985321786533487
Q ss_pred ------EEEECCCCCCEEEEEECCHHHHCCCC-----CCC--CEEEEECCHHCCCC-CCCCEEEEECHHHHHHHHHCCCC
Q ss_conf ------03502568614886401101102545-----568--57999700120017-66515445677888765411445
Q gi|254780153|r 155 ------VGFIPESREGLVICDATSAVFARHID-----FNK--LDVVTFSAQKVLGG-EAGFGIIILSPASVERLEKYVPS 220 (391)
Q Consensus 155 ------~~~~~~~~~~llivD~vSs~g~~p~d-----~~~--iDv~~a~sQK~l~~-ppGl~~v~~s~~al~~~~~~~~~ 220 (391)
T Consensus 205 ~~fL~a~r~lc~~~~~LLI~DEVQtG~GRTG~~fA~~Hygse~~PDi~T~AKgLGgG~P-iGA~~~~e~~a~~---~--- 277 (402)
T TIGR00707 205 KEFLKALRELCEDKDALLIFDEVQTGLGRTGKLFAYEHYGSEVEPDIITLAKGLGGGVP-IGAVLAKEEVAEA---L--- 277 (402)
T ss_pred HHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCH-HHHHEEHHHHHHH---C---
T ss_conf 78999999998648918999447528774332233120688455238754055527820-2232023678731---5---
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCC
Q ss_conf 778312320011232103347864466644889999999986201031899999999779999999874797167-6688
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVD 299 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~ 299 (391)
T Consensus 278 ----------------~~G~HGsTFGGNPL-Ac~Aa~~vl~~i~~~~~l~~v~~~----G~~f~~~L~~~~~~~~~l~-- 334 (402)
T TIGR00707 278 ----------------TPGDHGSTFGGNPL-ACAAALAVLEVIEKERLLEKVKEK----GDYFKERLEELIKKYIDLI-- 334 (402)
T ss_pred ----------------CCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHHCCCCCCCE--
T ss_conf ----------------89898666787389-999987766655051047899998----8999999998617766740--
Q ss_pred CCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 2003653178-982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r 300 ETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 300 ~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
T Consensus 335 k~VRG~GLmlG~e~~~~~----------~~a~~~~~~a~~~GlLv~~Ag----~~v~Rf~PPL~i~~e~i~~~~~~l~~~ 400 (402)
T TIGR00707 335 KEVRGKGLMLGIELEAPS----------VAAKDIVKEAREKGLLVNTAG----PKVLRFVPPLIITEEEIDEAVDALEEA 400 (402)
T ss_pred EEEECCEEEEEEEECCCC----------CCHHHHHHHHHHCCCEEECCC----CCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 153231234655642786----------558999999984892688178----870661578644588999999999998
Q ss_pred H
Q ss_conf 9
Q gi|254780153|r 379 F 379 (391)
Q Consensus 379 ~ 379 (391)
T Consensus 401 ~ 401 (402)
T TIGR00707 401 I 401 (402)
T ss_pred H
T ss_conf 2