HHsearch alignment for GI: 254780153 and conserved domain: TIGR01328

>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=98.06  E-value=3.1e-05  Score=52.69  Aligned_cols=209  Identities=23%  Similarity=0.273  Sum_probs=134.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
T Consensus        57 gNPTv~~LE------~riA~LE-g~EAavAt~SGMgAi~A~l~~~lkAgDh~i~d~~lYGCTfall~~~ltkfgi~v~f~  129 (392)
T TIGR01328        57 GNPTVDLLE------RRIAELE-GAEAAVATASGMGAIAATLLSLLKAGDHVISDETLYGCTFALLEDALTKFGIDVKFV  129 (392)
T ss_pred             CCCHHHHHH------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEE
T ss_conf             771377888------8987542-046778875128999999999985287577438742014899873267737527983


Q ss_pred             ECCCCCCCCHHHC--CCCCCEEEEEEECCCCEEECCEEE--------ECCCCC-CEEEEEECCH--HHHCCCCCCCCEEE
Q ss_conf             0577765786767--855657997420242022032035--------025686-1488640110--11025455685799
Q gi|254780153|r  121 TAPYGSLPDFSKV--DFDRDVVFVWNGTTSGVCVPDVGF--------IPESRE-GLVICDATSA--VFARHIDFNKLDVV  187 (391)
Q Consensus       121 ~~~~g~~~~~~~~--~~~~~v~~~h~ETstGv~~~~~~~--------~~~~~~-~llivD~vSs--~g~~p~d~~~iDv~  187 (391)
T Consensus       130 ~~~-----~pee~~a~i~dnT~ivYfETP---aNPtm~liD~e~v~r~A~~~gG~kVivDNTfatP~lt~P~al-G~D~V  200 (392)
T TIGR01328       130 DMA-----SPEEVKAAIKDNTKIVYFETP---ANPTMKLIDLELVVRVAHEKGGVKVIVDNTFATPYLTRPVAL-GVDVV  200 (392)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECC---CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCHHHC-CCCEE
T ss_conf             178-----779999844899779998659---987525775999999997529828998566277001380361-87768


Q ss_pred             EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             97001200176651--5445677888765411445778312320011232103347864466644889999999986201
Q gi|254780153|r  188 TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKK  265 (391)
Q Consensus       188 ~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~  265 (391)
T Consensus       201 VHSATKYigGHgDvVaG~~~G~~e~~q~iR~~g~K-------D~-----------tG~------ViSPfdAwL~lRGLk-  255 (392)
T TIGR01328       201 VHSATKYIGGHGDVVAGVLIGDAELLQRIRLVGVK-------DM-----------TGA------VISPFDAWLVLRGLK-  255 (392)
T ss_pred             EECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCC-------CC-----------CCC------EECHHHHHHHHHHHH-
T ss_conf             94241213761221122110775667440111100-------05-----------665------005578999974366-


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             03189999999977999999987479716
Q gi|254780153|r  266 MGGLSACVERCNANAAVLFQFIQENDWIE  294 (391)
Q Consensus       266 ~gGl~~~~~r~~~~a~~l~~~i~~~~~~~  294 (391)
T Consensus       256 --TL~~RM~rhsenA~kvAe~Lk~HPaVe  282 (392)
T TIGR01328       256 --TLAVRMKRHSENAEKVAEYLKEHPAVE  282 (392)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             --777888773053899999852388602