HHsearch alignment for GI: 254780153 and conserved domain: TIGR01885

>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=98.74  E-value=1.3e-05  Score=55.15  Aligned_cols=307  Identities=18%  Similarity=0.166  Sum_probs=190.2

Q ss_pred             CHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH-----HCC----CC
Q ss_conf             9689999863210----3653289889999999999999996889985799974873489998753-----205----78
Q gi|254780153|r   24 RPGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW-----SLL----GY   90 (391)
Q Consensus        24 ~p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~-----nl~----~~   90 (391)
T Consensus        60 hP~-i~~Al~~Q~~KlTL---~Sraf~nd~lg~~~~~~t~LfgGk~~-~vL~mN-TGaEAvEtA~KLAR~WgY~~K~ip~  133 (426)
T TIGR01885        60 HPK-IVNALKNQADKLTL---TSRAFHNDVLGEFAKYLTKLFGGKYE-KVLPMN-TGAEAVETALKLARKWGYEVKGIPR  133 (426)
T ss_pred             CHH-HHHHHHHHHHHCCC---HHHHHHCCHHHHHHHHHHHHCCCCCC-EEECCC-CCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             716-89999999851371---02766060357899999975499510-560456-8734799999999974413578557


Q ss_pred             CC-EEEEEECCHHHHHHHHHHHCCCC----------CE------EEEECCCCCCCCHHHC-CC--C--CCEEEEEEECCC
Q ss_conf             97-07997073688888765323876----------30------6740577765786767-85--5--657997420242
Q gi|254780153|r   91 RG-VDVLAWESFGLGWMSDIRQLSLQ----------DV------REFTAPYGSLPDFSKV-DF--D--RDVVFVWNGTTS  148 (391)
Q Consensus        91 ~~-~~~~~~g~~~~r~~~~~~~~~~~----------~~------~~~~~~~g~~~~~~~~-~~--~--~~v~~~h~ETst  148 (391)
T Consensus       134 ~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYgd~EAl~~aL~~P~~~GDnVAA~i~EPIQ  213 (426)
T TIGR01885       134 NKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYGDLEALRKALQDPKKTGDNVAAFILEPIQ  213 (426)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC
T ss_conf             62389985388733035443202672120067879677433578521155888789999972757788868999950403


Q ss_pred             C---EEECCEE------EECCCCCCEEEEEECCHHHHCC-----CCCCC--C--EEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf             0---2203203------5025686148864011011025-----45568--5--79997001200176651544567788
Q gi|254780153|r  149 G---VCVPDVG------FIPESREGLVICDATSAVFARH-----IDFNK--L--DVVTFSAQKVLGGEAGFGIIILSPAS  210 (391)
Q Consensus       149 G---v~~~~~~------~~~~~~~~llivD~vSs~g~~p-----~d~~~--i--Dv~~a~sQK~l~~ppGl~~v~~s~~a  210 (391)
T Consensus       214 GEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~PDi~lL--GKALsG--Gv~PiSa~---  286 (426)
T TIGR01885       214 GEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGRTGKLLACDHENAEVKPDIVLL--GKALSG--GVYPISAV---  286 (426)
T ss_pred             CCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCEEE--EHHHCC--CCCCEEEE---
T ss_conf             54436848963578999986551872898200038402545331010588204503351--123458--94622436---


Q ss_pred             HHHHHHCCCCCCCCCHHHCCHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8765411445778312320011232103-347864466644889999999986201031899999999779999999874
Q gi|254780153|r  211 VERLEKYVPSWPLPKIFRMVKGGRVMEG-LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE  289 (391)
Q Consensus       211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~  289 (391)
T Consensus       287 -------la~~d---im~vl~-----PGPF~HGSTfGGNPLA-cavaiAaLeVL~~e----kL~~~A~~lG~~f~~~L~~  346 (426)
T TIGR01885       287 -------LADDD---IMSVLK-----PGPFEHGSTFGGNPLA-CAVAIAALEVLEEE----KLAERADQLGDMFLDELKQ  346 (426)
T ss_pred             -------EECCC---EEECCC-----CCCCCCCCCCCCCHHH-HHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHH
T ss_conf             -------66464---012117-----6486567768875789-99999999987404----5068898832899999998


Q ss_pred             CCCCCC-CCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHH
Q ss_conf             797167-66882003653178-98247310113734567888999998886282872665-5676750568615888999
Q gi|254780153|r  290 NDWIEN-LAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKE  366 (391)
Q Consensus       290 ~~~~~~-~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~  366 (391)
T Consensus       347 l~~~S~dvv--~EVRGkGLL~AIe~~~~ka~~~-------~~w~~C-l~~k~~GLlak~~nh---d~~IR~aPPL~i~~E  413 (426)
T TIGR01885       347 LARESPDVV--KEVRGKGLLIAIEFKENKADEI-------GAWDVC-LRLKENGLLAKPTNH---DKIIRLAPPLVITKE  413 (426)
T ss_pred             HHHHCCCCE--EHHCCCCCEEEEEEECCCCCCC-------CHHHHH-HHHHCCCCEECCCCC---CCEEEECCCCCCCHH
T ss_conf             875076400--0115672168888506533326-------466887-885207421013358---706871788526389


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780153|r  367 DLLLLCDWLR  376 (391)
Q Consensus       367 dv~~L~~aLe  376 (391)
T Consensus       414 ~L~~~ie~i~  423 (426)
T TIGR01885       414 QLDEVIEIIR  423 (426)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999986