HHsearch alignment for GI: 254780153 and conserved domain: TIGR01885
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=98.74 E-value=1.3e-05 Score=55.15 Aligned_cols=307 Identities=18% Similarity=0.166 Sum_probs=190.2
Q ss_pred CHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH-----HCC----CC
Q ss_conf 9689999863210----3653289889999999999999996889985799974873489998753-----205----78
Q gi|254780153|r 24 RPGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW-----SLL----GY 90 (391)
Q Consensus 24 ~p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~-----nl~----~~ 90 (391)
T Consensus 60 hP~-i~~Al~~Q~~KlTL---~Sraf~nd~lg~~~~~~t~LfgGk~~-~vL~mN-TGaEAvEtA~KLAR~WgY~~K~ip~ 133 (426)
T TIGR01885 60 HPK-IVNALKNQADKLTL---TSRAFHNDVLGEFAKYLTKLFGGKYE-KVLPMN-TGAEAVETALKLARKWGYEVKGIPR 133 (426)
T ss_pred CHH-HHHHHHHHHHHCCC---HHHHHHCCHHHHHHHHHHHHCCCCCC-EEECCC-CCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 716-89999999851371---02766060357899999975499510-560456-8734799999999974413578557
Q ss_pred CC-EEEEEECCHHHHHHHHHHHCCCC----------CE------EEEECCCCCCCCHHHC-CC--C--CCEEEEEEECCC
Q ss_conf 97-07997073688888765323876----------30------6740577765786767-85--5--657997420242
Q gi|254780153|r 91 RG-VDVLAWESFGLGWMSDIRQLSLQ----------DV------REFTAPYGSLPDFSKV-DF--D--RDVVFVWNGTTS 148 (391)
Q Consensus 91 ~~-~~~~~~g~~~~r~~~~~~~~~~~----------~~------~~~~~~~g~~~~~~~~-~~--~--~~v~~~h~ETst 148 (391)
T Consensus 134 ~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYgd~EAl~~aL~~P~~~GDnVAA~i~EPIQ 213 (426)
T TIGR01885 134 NKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYGDLEALRKALQDPKKTGDNVAAFILEPIQ 213 (426)
T ss_pred CCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC
T ss_conf 62389985388733035443202672120067879677433578521155888789999972757788868999950403
Q ss_pred C---EEECCEE------EECCCCCCEEEEEECCHHHHCC-----CCCCC--C--EEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf 0---2203203------5025686148864011011025-----45568--5--79997001200176651544567788
Q gi|254780153|r 149 G---VCVPDVG------FIPESREGLVICDATSAVFARH-----IDFNK--L--DVVTFSAQKVLGGEAGFGIIILSPAS 210 (391)
Q Consensus 149 G---v~~~~~~------~~~~~~~~llivD~vSs~g~~p-----~d~~~--i--Dv~~a~sQK~l~~ppGl~~v~~s~~a 210 (391)
T Consensus 214 GEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~PDi~lL--GKALsG--Gv~PiSa~--- 286 (426)
T TIGR01885 214 GEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGRTGKLLACDHENAEVKPDIVLL--GKALSG--GVYPISAV--- 286 (426)
T ss_pred CCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCEEE--EHHHCC--CCCCEEEE---
T ss_conf 54436848963578999986551872898200038402545331010588204503351--123458--94622436---
Q ss_pred HHHHHHCCCCCCCCCHHHCCHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8765411445778312320011232103-347864466644889999999986201031899999999779999999874
Q gi|254780153|r 211 VERLEKYVPSWPLPKIFRMVKGGRVMEG-LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE 289 (391)
Q Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~ 289 (391)
T Consensus 287 -------la~~d---im~vl~-----PGPF~HGSTfGGNPLA-cavaiAaLeVL~~e----kL~~~A~~lG~~f~~~L~~ 346 (426)
T TIGR01885 287 -------LADDD---IMSVLK-----PGPFEHGSTFGGNPLA-CAVAIAALEVLEEE----KLAERADQLGDMFLDELKQ 346 (426)
T ss_pred -------EECCC---EEECCC-----CCCCCCCCCCCCCHHH-HHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHH
T ss_conf -------66464---012117-----6486567768875789-99999999987404----5068898832899999998
Q ss_pred CCCCCC-CCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHH
Q ss_conf 797167-66882003653178-98247310113734567888999998886282872665-5676750568615888999
Q gi|254780153|r 290 NDWIEN-LAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKE 366 (391)
Q Consensus 290 ~~~~~~-~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~ 366 (391)
T Consensus 347 l~~~S~dvv--~EVRGkGLL~AIe~~~~ka~~~-------~~w~~C-l~~k~~GLlak~~nh---d~~IR~aPPL~i~~E 413 (426)
T TIGR01885 347 LARESPDVV--KEVRGKGLLIAIEFKENKADEI-------GAWDVC-LRLKENGLLAKPTNH---DKIIRLAPPLVITKE 413 (426)
T ss_pred HHHHCCCCE--EHHCCCCCEEEEEEECCCCCCC-------CHHHHH-HHHHCCCCEECCCCC---CCEEEECCCCCCCHH
T ss_conf 875076400--0115672168888506533326-------466887-885207421013358---706871788526389
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780153|r 367 DLLLLCDWLR 376 (391)
Q Consensus 367 dv~~L~~aLe 376 (391)
T Consensus 414 ~L~~~ie~i~ 423 (426)
T TIGR01885 414 QLDEVIEIIR 423 (426)
T ss_pred HHHHHHHHHH
T ss_conf 9999999986