HHsearch alignment for GI: 254780153 and conserved domain: TIGR01976

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=99.78  E-value=7.2e-16  Score=120.25  Aligned_cols=332  Identities=17%  Similarity=0.131  Sum_probs=229.0

Q ss_pred             CCC-CCCCCCCCHHHHHHHHHHHCC-------CCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC--HHHHHH
Q ss_conf             886-888776896899998632103-------653289-889999999999999996889985799974873--489998
Q gi|254780153|r   14 PFF-SSGPCAKRPGWSLGILEGALL-------GRSHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASD--TGAVEM   82 (391)
Q Consensus        14 ~~F-~pGP~~~~p~~v~~~~~~~~l-------~~sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~Gsg--T~~~ea   82 (391)
T Consensus        23 ~~~DnpAG~q~-Pq~V~dAv~~~L~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~G~~~T~L~~~ls~  101 (410)
T TIGR01976        23 VFFDNPAGTQI-PQSVLDAVSAALTRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVFGANATSLAYLLSR  101 (410)
T ss_pred             EEEECCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHH
T ss_conf             89757888877-73479999999874130137677663068999999999999997267988856767866899999999


Q ss_pred             HHHHCCCCCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCC-CCHHHC-----CCCCCEEEEEEECCCCEEEC
Q ss_conf             7532057897079970---73688888765323876306740577765-786767-----85565799742024202203
Q gi|254780153|r   83 ALWSLLGYRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSL-PDFSKV-----DFDRDVVFVWNGTTSGVCVP  153 (391)
Q Consensus        83 ~~~nl~~~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~-----~~~~~v~~~h~ETstGv~~~  153 (391)
T Consensus       102 a~~~~~~~GDEvivt~LDHeaNispW~~~a~~~G-a~Vkw~~~d~~~~~L~~~~L~~Lls~rTRLVAvt~ASn~~Gs~~d  180 (410)
T TIGR01976       102 ALSRRWGPGDEVIVTRLDHEANISPWLQAAEDAG-AKVKWARVDEADGELHPDDLASLLSPRTRLVAVTAASNLLGSIVD  180 (410)
T ss_pred             HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
T ss_conf             9851268985589716766001368999998389-789996336231544869982366882255562344023255115


Q ss_pred             CEEE--ECCCCCCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             2035--02568614886401101102545--5685799970012001766515445677888765411445778312320
Q gi|254780153|r  154 DVGF--IPESREGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       154 ~~~~--~~~~~~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
T Consensus       181 l~A~~~~vh~aGA~v~VDaVhyaPH~L~Dvqa~gaD~l~cSaYK~f-GPH-~G~l~~R~~~~~~l~~~k~~~~------~  252 (410)
T TIGR01976       181 LAALTELVHAAGALVYVDAVHYAPHGLIDVQALGADFLVCSAYKFF-GPH-LGILWGRPELLKSLPPYKLEFS------E  252 (410)
T ss_pred             HHHHHHHHHHCCCEEEECHHHHCCCCCCCHHHHCCCEEEECCEECC-CCC-EEEEEECHHHHCCCCCCCCCCC------C
T ss_conf             8899999987598798811100456664134227887998563116-885-0178711466404687633677------8


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----C-------------HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             01123210334786446664488999999998620103----1-------------899999999779999999874797
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG----G-------------LSACVERCNANAAVLFQFIQENDW  292 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g----G-------------l~~~~~r~~~~a~~l~~~i~~~~~  292 (391)
T Consensus       253 ----d~~P~r~E---~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~~~Ll~~L~~~P~  325 (410)
T TIGR01976       253 ----DTGPERFE---LGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLAERLLAGLSDLPG  325 (410)
T ss_pred             ----CCCCCEEE---ECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             ----88885145---14556026789999999999823210689886558999999999999999999999999874895


Q ss_pred             CCCCCC---C-CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-C-----CCC-----CCEEEE
Q ss_conf             167668---8-200365317898247310113734567888999998886282872665-5-----676-----750568
Q gi|254780153|r  293 IENLAV---D-ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-Y-----RDA-----PLGLRV  357 (391)
Q Consensus       293 ~~~~~~---~-~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~-----r~~-----~~~~RI  357 (391)
T Consensus       326 ~t~yG~~d~~R~~~RvP-Tv~F~v~~~~------------P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~~GvvR~  392 (410)
T TIGR01976       326 VTVYGVQDEKRLAERVP-TVAFTVAGLS------------PQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEADGGVVRV  392 (410)
T ss_pred             EEEECHHHHHHHHHCCC-EEEEEECCCC------------HHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCEEEE
T ss_conf             69973557864642597-5889727878------------7999999853686331264116899986589898873898


Q ss_pred             ECCCCCCHHHHHHHHHHH
Q ss_conf             615888999999999999
Q gi|254780153|r  358 WVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       358 g~~g~i~~~dv~~L~~aL  375 (391)
T Consensus       393 gLaHY~t~eevd~l~~aL  410 (410)
T TIGR01976       393 GLAHYNTAEEVDRLLEAL  410 (410)
T ss_pred             EECCCCCHHHHHHHHHCC
T ss_conf             525779889999998509