HHsearch alignment for GI: 254780153 and conserved domain: TIGR01977
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.97 E-value=5.7e-29 Score=203.48 Aligned_cols=335 Identities=15% Similarity=0.166 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHC------CCCC-CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-CCC--CCCE
Q ss_conf 689999863210------3653-289-8899999999999999968899857999748734899987532-057--8970
Q gi|254780153|r 25 PGWSLGILEGAL------LGRS-HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-LLG--YRGV 93 (391)
Q Consensus 25 p~~v~~~~~~~~------l~~s-HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-l~~--~~~~ 93 (391)
T Consensus 13 P~ev~~a~~~~~~~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~F-t~nAT~aLN~~L~Gl~lknr~g~h 91 (384)
T TIGR01977 13 PDEVYEAMADFLKNYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVF-TNNATTALNIALKGLILKNREGDH 91 (384)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEE-ECCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 3899999999987348756888750345414228899999999848897462784-060779999998433000559996
Q ss_pred EEEEE-CCHHH-HHHHHHHHCC-CCCEEEEECCCCCCCCHHHC----CC--CCCEEEEEEECCCCEEECCEEE---ECCC
Q ss_conf 79970-73688-8887653238-76306740577765786767----85--5657997420242022032035---0256
Q gi|254780153|r 94 DVLAW-ESFGL-GWMSDIRQLS-LQDVREFTAPYGSLPDFSKV----DF--DRDVVFVWNGTTSGVCVPDVGF---IPES 161 (391)
Q Consensus 94 ~~~~~-g~~~~-r~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~~--~~~v~~~h~ETstGv~~~~~~~---~~~~ 161 (391)
T Consensus 92 Vi~t~mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~kTk~iv~~HaSNV~G~ilpiEEIgR~lA~e 171 (384)
T TIGR01977 92 VITTPMEHNSVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKNKTKLIVVSHASNVTGTILPIEEIGRELAKE 171 (384)
T ss_pred EEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHHHH
T ss_conf 78647602366438999973599758998627888521679999853378830043220030103112578999999986
Q ss_pred CCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf 8614886401101102545568--57999700120017665154456778887654114457783123200112321033
Q gi|254780153|r 162 REGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239 (391)
Q Consensus 162 ~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (391)
T Consensus 172 ~g~~~~~DAaQtAGv~~Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~e~~~~~l~pl~~GGTGs~S~~~~~P-~~~Pdr 250 (384)
T TIGR01977 172 NGIFFILDAAQTAGVIPIDMEELAIDMLAFTGHKGLLGPQGTGGLIIKEGIKEILKPLKSGGTGSHSALIDQP-SELPDR 250 (384)
T ss_pred CCCEEEEECCCCCCCCHHCCCHHHCCEEEECCCHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCC-CCCCCH
T ss_conf 7973998320003754101032206767637752200113631578873705674532068875453444577-604320
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 47864466644889999999986201031899999999779999999874797167668820036531789824731011
Q gi|254780153|r 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS 319 (391)
Q Consensus 240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~ 319 (391)
T Consensus 251 fE~G---TLN~pGI~gL~agik~~~~~-gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~~~~~vvSf~~~g~---- 322 (384)
T TIGR01977 251 FESG---TLNTPGIAGLNAGIKFIEKI-GIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPAKRVGVVSFTVEGI---- 322 (384)
T ss_pred HCCC---CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCEEEEEECCC----
T ss_conf 1144---00379999998887887564-477899999999999987401678067627703433267589983488----
Q ss_pred CCHHHHHHHHHHHHHHHHHCC-EEECCCCC------CCCCC----EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 373456788899999888628-28726655------67675----056861588899999999999999
Q gi|254780153|r 320 LDINSQKSFCKSMLSFLEKEE-IAYDIGSY------RDAPL----GLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~------r~~~~----~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
T Consensus 323 --------d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R~S~gyFnt~ee~~~l~~al~~ 383 (384)
T TIGR01977 323 --------DSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLVEALSE 383 (384)
T ss_pred --------CHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf --------8778999998618918976766641230353116765388727877888999999999850