HHsearch alignment for GI: 254780153 and conserved domain: TIGR03372
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.00 E-value=3.5e-07 Score=65.08 Aligned_cols=313 Identities=15% Similarity=0.128 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---C-CCCC-EEEEE
Q ss_conf 96899998632103653289889-99999999999999688998579997487348999875320---5-7897-07997
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---L-GYRG-VDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~-~~~~-~~~~~ 97 (391)
T Consensus 93 hp~-I~~Ai~~Ql~~~~~~s~~~~~~~~~~lae~L~~~~--P~~~~~vff~nSGSEAvE~AiKlAr~y~~~~Gk~~ii~~ 169 (442)
T TIGR03372 93 NPN-VIAAVENQLAKQPLHSQELLDPLRALLAKTLAALT--PGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAA 169 (442)
T ss_pred CHH-HHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 899-99999999723683014445689999999999747--888787986388679999999999997326898189999
Q ss_pred ECCHHHHHHHHHHHCCCCCEE---------EEECCCCCCCCH----HHCC-CCCCEEEEEEECCCC---EEECC------
Q ss_conf 073688888765323876306---------740577765786----7678-556579974202420---22032------
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDF----SKVD-FDRDVVFVWNGTTSG---VCVPD------ 154 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~----~~~~-~~~~v~~~h~ETstG---v~~~~------ 154 (391)
T Consensus 170 ~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~iAaviiEPiqg~gG~~~p~~~yl~~ 249 (442)
T TIGR03372 170 SGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPA 249 (442)
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 16778747570302478433578878999825557899999999999887559978999984677777874499999999
Q ss_pred EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 035025686148864011011025---4--5568579997001200176-651544567788876541144577831232
Q gi|254780153|r 155 VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 155 ~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
T Consensus 250 lr~lc~~~gvllI~DEVqtGfGRTG~~fa~e~~gV~PDIvt~gKgLggG~~Pi~av~~~~~i~~~~~~---~-~------ 319 (442)
T TIGR03372 250 VRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD---N-P------ 319 (442)
T ss_pred HHHHHHHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECHHHHHHHHC---C-C------
T ss_conf 99999984970323621227984778337654899997686545415887762689750999877624---8-9------
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCE
Q ss_conf 0011232103347864466644889999999986201031899999999779999999874797167-668820036531
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETTRSNTS 307 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~rS~~~ 307 (391)
T Consensus 320 ----------~~h~sTf-~Gnpla~aaalavL~~i~~~~----l~~~~~~~G~~l~~~L~~L~~~~p~~V~d--VRG~GL 382 (442)
T TIGR03372 320 ----------FLHTTTF-GGNPLACAAALATINELLEKN----LPAQAAIKGDFLLDGFQQLAAEYPDLIIE--ARGKGL 382 (442)
T ss_pred ----------CCCCCCC-CCCHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE--EEECCE
T ss_conf ----------7547888-989999999999999998656----99999999999999999998768781668--564538
Q ss_pred EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
T Consensus 383 m~giE~~~~~-----------~~~~~~~~~~~~gvl~~~~~~--~~~~iri~PPL~it~eeid~~i~~l~~aL 442 (442)
T TIGR03372 383 LMAIEFRDNE-----------IGYAFAKELFQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEEEEECCCH-----------HHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9999978816-----------799999999978979985589--98989998895089999999999999869