HHsearch alignment for GI: 254780153 and conserved domain: TIGR03576
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=92.06 E-value=0.92 Score=24.26 Aligned_cols=258 Identities=17% Similarity=0.152 Sum_probs=135.4
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH-HHHHHHHHHHCCCCCEEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736-88888765323876306740
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF-GLGWMSDIRQLSLQDVREFT 121 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~-~~r~~~~~~~~~~~~~~~~~ 121 (391)
T Consensus 52 paif~e---k~~~~g~~HlgG~-~e~~v~~NRT-SsailAtIlaL~~~~~~Vvh~vPe~paHPSI~rsc~lag------- 119 (346)
T TIGR03576 52 PAIFEE---KVQELGREHLGGP-EEKILVFNRT-SSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAG------- 119 (346)
T ss_pred CHHHHH---HHHHHHHHHCCCC-CCEEEEECCC-HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECC-------
T ss_conf 087699---9999999873998-3257774562-699999999835788705897878789997302005148-------
Q ss_pred CCCCCCCCHHHCCCCC--CEEEEEEECCCCEEECCEE---E--ECCCCCCEEEEEECCHHHH-----CCCC-CCCCEEEE
Q ss_conf 5777657867678556--5799742024202203203---5--0256861488640110110-----2545-56857999
Q gi|254780153|r 122 APYGSLPDFSKVDFDR--DVVFVWNGTTSGVCVPDVG---F--IPESREGLVICDATSAVFA-----RHID-FNKLDVVT 188 (391)
Q Consensus 122 ~~~g~~~~~~~~~~~~--~v~~~h~ETstGv~~~~~~---~--~~~~~~~llivD~vSs~g~-----~p~d-~~~iDv~~ 188 (391)
T Consensus 120 aey~E~d~~~el~~~d~~slvviTgstmd~~vi~~d~~k~vI~~Ak~~~a~V~vDDAsGARvR~L~gq~~al~lGADLvV 199 (346)
T TIGR03576 120 AEYFESDELSELKKIDGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVV 199 (346)
T ss_pred CCEEECCCHHHHCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCEEE
T ss_conf 71475066776276788718999378777300457889999999874698499854888751665199986555642688
Q ss_pred ECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 70012001766515445677888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r 189 FSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG 268 (391)
Q Consensus 189 a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG 268 (391)
T Consensus 200 TS~DKlM~GP-R~GlLaG~~eLV~ki~~~--------------~~~~------GlEaq-~P--i~aAmv~aLe~f~~~-~ 254 (346)
T TIGR03576 200 TSTDKLMDGP-RGGLLAGRKELVDKIKSV--------------GEQF------GLEAQ-AP--LLAAVVRALEEFELS-R 254 (346)
T ss_pred EEHHHCCCCC-CCCEECCCHHHHHHHHHH--------------HHHC------CCCCC-CC--HHHHHHHHHHCCCHH-H
T ss_conf 4002126677-541122888999999999--------------8752------77778-41--599999999707999-9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE-CCCC
Q ss_conf 899999999779999999874797167668820036531789824731011373456788899999888628287-2665
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAY-DIGS 347 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~ 347 (391)
T Consensus 255 l~~a~~r~~~----~~l~~~--~~l~------~e~TptGf~i--k~~~--------~e~~~~~~~~LL~~ygIiTIta~G 312 (346)
T TIGR03576 255 IRDAFKRKEE----VYLRLF--DKLN------VERTPTGFVI--KGVE--------EEKLIEIGLDLLRNYGIITITAVG 312 (346)
T ss_pred HHHHHHHHHH----HHHHHH--HCCC------CCCCCCEEEE--ECCC--------HHHHHHHHHHHHHHCCEEEEECCC
T ss_conf 9999999999----887653--0357------4327853798--5656--------888899999999976948983477
Q ss_pred CCCCCCEEEEEC
Q ss_conf 567675056861
Q gi|254780153|r 348 YRDAPLGLRVWV 359 (391)
Q Consensus 348 ~r~~~~~~RIg~ 359 (391)
T Consensus 313 mpgasktlR~d~ 324 (346)
T TIGR03576 313 MPGASKTLRFDL 324 (346)
T ss_pred CCCCCCEEEEEE
T ss_conf 888763268762