HHsearch alignment for GI: 254780153 and conserved domain: TIGR03576

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=92.06  E-value=0.92  Score=24.26  Aligned_cols=258  Identities=17%  Similarity=0.152  Sum_probs=135.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH-HHHHHHHHHHCCCCCEEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736-88888765323876306740
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF-GLGWMSDIRQLSLQDVREFT  121 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~-~~r~~~~~~~~~~~~~~~~~  121 (391)
T Consensus        52 paif~e---k~~~~g~~HlgG~-~e~~v~~NRT-SsailAtIlaL~~~~~~Vvh~vPe~paHPSI~rsc~lag-------  119 (346)
T TIGR03576        52 PAIFEE---KVQELGREHLGGP-EEKILVFNRT-SSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAG-------  119 (346)
T ss_pred             CHHHHH---HHHHHHHHHCCCC-CCEEEEECCC-HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECC-------
T ss_conf             087699---9999999873998-3257774562-699999999835788705897878789997302005148-------


Q ss_pred             CCCCCCCCHHHCCCCC--CEEEEEEECCCCEEECCEE---E--ECCCCCCEEEEEECCHHHH-----CCCC-CCCCEEEE
Q ss_conf             5777657867678556--5799742024202203203---5--0256861488640110110-----2545-56857999
Q gi|254780153|r  122 APYGSLPDFSKVDFDR--DVVFVWNGTTSGVCVPDVG---F--IPESREGLVICDATSAVFA-----RHID-FNKLDVVT  188 (391)
Q Consensus       122 ~~~g~~~~~~~~~~~~--~v~~~h~ETstGv~~~~~~---~--~~~~~~~llivD~vSs~g~-----~p~d-~~~iDv~~  188 (391)
T Consensus       120 aey~E~d~~~el~~~d~~slvviTgstmd~~vi~~d~~k~vI~~Ak~~~a~V~vDDAsGARvR~L~gq~~al~lGADLvV  199 (346)
T TIGR03576       120 AEYFESDELSELKKIDGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVV  199 (346)
T ss_pred             CCEEECCCHHHHCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCEEE
T ss_conf             71475066776276788718999378777300457889999999874698499854888751665199986555642688


Q ss_pred             ECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             70012001766515445677888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r  189 FSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG  268 (391)
Q Consensus       189 a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG  268 (391)
T Consensus       200 TS~DKlM~GP-R~GlLaG~~eLV~ki~~~--------------~~~~------GlEaq-~P--i~aAmv~aLe~f~~~-~  254 (346)
T TIGR03576       200 TSTDKLMDGP-RGGLLAGRKELVDKIKSV--------------GEQF------GLEAQ-AP--LLAAVVRALEEFELS-R  254 (346)
T ss_pred             EEHHHCCCCC-CCCEECCCHHHHHHHHHH--------------HHHC------CCCCC-CC--HHHHHHHHHHCCCHH-H
T ss_conf             4002126677-541122888999999999--------------8752------77778-41--599999999707999-9


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE-CCCC
Q ss_conf             899999999779999999874797167668820036531789824731011373456788899999888628287-2665
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAY-DIGS  347 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~  347 (391)
T Consensus       255 l~~a~~r~~~----~~l~~~--~~l~------~e~TptGf~i--k~~~--------~e~~~~~~~~LL~~ygIiTIta~G  312 (346)
T TIGR03576       255 IRDAFKRKEE----VYLRLF--DKLN------VERTPTGFVI--KGVE--------EEKLIEIGLDLLRNYGIITITAVG  312 (346)
T ss_pred             HHHHHHHHHH----HHHHHH--HCCC------CCCCCCEEEE--ECCC--------HHHHHHHHHHHHHHCCEEEEECCC
T ss_conf             9999999999----887653--0357------4327853798--5656--------888899999999976948983477


Q ss_pred             CCCCCCEEEEEC
Q ss_conf             567675056861
Q gi|254780153|r  348 YRDAPLGLRVWV  359 (391)
Q Consensus       348 ~r~~~~~~RIg~  359 (391)
T Consensus       313 mpgasktlR~d~  324 (346)
T TIGR03576       313 MPGASKTLRFDL  324 (346)
T ss_pred             CCCCCCEEEEEE
T ss_conf             888763268762