Query         gi|254780153|ref|YP_003064566.1| phosphoserine aminotransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 391
No_of_seqs    151 out of 2406
Neff          8.0 
Searched_HMMs 39220
Date          Sun May 22 20:24:06 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780153.hhm -d /home/congqian_1/database/cdd/Cdd.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PRK03080 phosphoserine aminotr 100.0       0       0  659.3  36.4  379    1-385     1-380 (381)
  2 TIGR01364 serC_1 phosphoserine 100.0       0       0  581.0  28.2  347   14-377     2-386 (391)
  3 cd00611 PSAT_like Phosphoserin 100.0       0       0  548.1  31.3  334   14-376     1-351 (355)
  4 PRK05355 phosphoserine aminotr 100.0       0       0  535.6  32.0  340   11-381     2-357 (360)
  5 TIGR03301 PhnW-AepZ 2-aminoeth 100.0       0       0  533.6  33.3  343   14-379     1-355 (355)
  6 PRK12462 phosphoserine aminotr 100.0       0       0  534.1  31.7  343    9-381     1-361 (364)
  7 COG1932 SerC Phosphoserine ami 100.0       0       0  533.4  31.9  347    9-383     2-365 (365)
  8 COG0075 Serine-pyruvate aminot 100.0       0       0  522.4  31.6  353   13-388     6-370 (383)
  9 PRK13479 2-aminoethylphosphona 100.0       0       0  518.8  31.3  352   10-384     3-366 (368)
 10 cd06451 AGAT_like Alanine-glyo 100.0       0       0  496.8  31.8  344   14-380     1-356 (356)
 11 KOG2862 consensus              100.0       0       0  447.5  28.6  358    7-383    12-384 (385)
 12 KOG2790 consensus              100.0       0       0  447.7  23.6  342   12-381     7-367 (370)
 13 TIGR01365 serC_2 phosphoserine 100.0       0       0  408.7  25.3  372   10-381     1-378 (379)
 14 TIGR02326 transamin_PhnW 2-ami 100.0       0       0  398.6  25.2  344   14-380     5-364 (366)
 15 TIGR01366 serC_3 phosphoserine 100.0       0       0  367.2  25.6  355   10-381     1-361 (362)
 16 TIGR01979 sufS cysteine desulf 100.0 5.6E-37 1.4E-41  254.4  23.3  349   15-380    22-406 (409)
 17 pfam00266 Aminotran_5 Aminotra 100.0   1E-35 2.6E-40  246.4  27.3  337   17-371     5-371 (371)
 18 PRK09295 selenocysteine lyase; 100.0 4.9E-31 1.2E-35  216.6  30.3  346   15-381    26-404 (406)
 19 PRK10874 cysteine sulfinate de 100.0 8.9E-31 2.3E-35  215.0  29.3  355    7-383    14-400 (401)
 20 TIGR03392 FeS_syn_CsdA cystein 100.0 1.8E-30 4.7E-35  213.0  30.7  355    7-383    11-397 (398)
 21 COG0520 csdA Selenocysteine ly 100.0 8.1E-31 2.1E-35  215.2  28.3  348   14-378    24-402 (405)
 22 cd06453 SufS_like Cysteine des 100.0 6.4E-30 1.6E-34  209.5  27.7  338   18-375     6-373 (373)
 23 TIGR01977 am_tr_V_EF2568 cyste 100.0 5.7E-29 1.5E-33  203.5  23.3  335   25-377    13-383 (384)
 24 PRK02948 cysteine desulfurase; 100.0 4.9E-28 1.2E-32  197.5  27.3  330   21-391    10-380 (381)
 25 TIGR03402 FeS_nifS cysteine de 100.0 1.2E-27   3E-32  195.2  26.2  328   18-384     6-375 (379)
 26 TIGR03403 nifS_epsilon cystein 100.0 1.2E-26 2.9E-31  188.8  27.3  330   18-384     6-378 (382)
 27 COG1104 NifS Cysteine sulfinat  99.9 7.2E-22 1.8E-26  158.4  27.2  327   21-385    11-381 (386)
 28 TIGR03235 DNA_S_dndA cysteine   99.9 1.2E-22 3.1E-27  163.3  22.1  297   21-352     8-328 (354)
 29 KOG1549 consensus               99.8 1.1E-16 2.9E-21  125.4  22.6  339   12-381    45-418 (428)
 30 TIGR01976 am_tr_V_VC1184 cyste  99.8 7.2E-16 1.8E-20  120.3  23.3  332   14-375    23-410 (410)
 31 cd01494 AAT_I Aspartate aminot  99.7 4.7E-17 1.2E-21  127.8  12.8  154   50-207     2-170 (170)
 32 cd06454 KBL_like KBL_like; thi  99.6 8.5E-13 2.2E-17  100.7  23.6  303   24-378    17-348 (349)
 33 PRK05958 8-amino-7-oxononanoat  99.6 1.4E-11 3.5E-16   93.0  26.7  306   23-381    54-386 (387)
 34 PRK10534 L-threonine aldolase;  99.5   2E-11 5.1E-16   92.0  22.6  299   18-380    10-332 (333)
 35 cd06502 TA_like Low-specificit  99.5 2.6E-11 6.6E-16   91.3  22.7  306   18-377     8-337 (338)
 36 PRK13520 L-tyrosine decarboxyl  99.5 5.5E-11 1.4E-15   89.2  23.8  326   14-381    27-375 (375)
 37 PRK06225 aspartate aminotransf  99.5 1.2E-10 3.1E-15   87.1  25.0  328   10-384    21-374 (375)
 38 pfam00155 Aminotran_1_2 Aminot  99.5 3.4E-10 8.7E-15   84.2  26.8  304   24-375    16-351 (351)
 39 PRK06939 2-amino-3-ketobutyrat  99.5 2.5E-10 6.4E-15   85.0  25.3  316   14-382    45-394 (395)
 40 PRK07179 hypothetical protein;  99.5 1.5E-10 3.8E-15   86.4  24.0  309   24-386    70-404 (408)
 41 PRK04870 histidinol-phosphate   99.5 4.8E-10 1.2E-14   83.3  26.2  296   24-378    41-355 (356)
 42 cd06450 DOPA_deC_like DOPA dec  99.5 2.1E-10 5.3E-15   85.5  24.3  298   17-377     5-344 (345)
 43 cd06452 SepCysS Sep-tRNA:Cys-t  99.5 2.7E-11 6.8E-16   91.2  19.6  294   50-377    46-358 (361)
 44 PRK13393 5-aminolevulinate syn  99.5   4E-10   1E-14   83.8  25.5  315   15-383    49-398 (404)
 45 PRK00950 histidinol-phosphate   99.4 9.1E-10 2.3E-14   81.5  25.6  310   14-379    38-368 (369)
 46 TIGR00858 bioF 8-amino-7-oxono  99.4 6.5E-11 1.7E-15   88.7  19.2  303   21-376    37-378 (378)
 47 PRK09064 5-aminolevulinate syn  99.4 1.3E-09 3.2E-14   80.5  25.5  318   14-385    48-400 (406)
 48 PRK05937 8-amino-7-oxononanoat  99.4 1.8E-09 4.6E-14   79.6  26.2  311   13-383     6-352 (370)
 49 PRK07310 consensus              99.4 1.1E-09 2.9E-14   80.9  25.0  321   25-383    45-394 (395)
 50 PRK08249 cystathionine gamma-s  99.4   3E-10 7.7E-15   84.5  21.7  287   43-385    62-397 (398)
 51 PRK13392 5-aminolevulinate syn  99.4 3.2E-09 8.2E-14   78.0  26.9  315   14-383    49-399 (410)
 52 PRK09331 Sep-tRNA:Cys-tRNA syn  99.4 1.6E-10 4.2E-15   86.2  20.2  294   50-378    64-377 (386)
 53 PRK08776 cystathionine gamma-s  99.4 4.2E-10 1.1E-14   83.6  22.1  290   44-390    59-399 (405)
 54 PRK02731 histidinol-phosphate   99.4 1.8E-09 4.7E-14   79.5  25.2  297   26-381    48-366 (367)
 55 PRK09028 cystathionine beta-ly  99.4 4.2E-10 1.1E-14   83.6  21.7  287   43-385    59-391 (394)
 56 PRK07503 methionine gamma-lyas  99.4 4.2E-10 1.1E-14   83.6  21.3  290   43-386    63-401 (403)
 57 PRK09105 putative aminotransfe  99.4 3.4E-09 8.6E-14   77.9  25.8  294   25-380    62-372 (374)
 58 PRK06207 aspartate aminotransf  99.4 3.1E-09 7.8E-14   78.1  25.1  327   11-383    38-405 (406)
 59 PRK08045 cystathionine gamma-s  99.4 1.2E-09   3E-14   80.8  22.5  285   43-383    50-384 (386)
 60 PRK05387 histidinol-phosphate   99.4 3.5E-09 8.9E-14   77.7  24.7  302   25-380    40-352 (353)
 61 PRK05764 aspartate aminotransf  99.4 1.4E-09 3.6E-14   80.3  22.5  314   25-383    46-389 (389)
 62 PRK07505 hypothetical protein;  99.4   2E-09 5.2E-14   79.3  23.1  307   19-382    61-403 (405)
 63 PRK03566 consensus              99.4   4E-09   1E-13   77.4  24.5  295   25-381    47-364 (365)
 64 PRK05968 hypothetical protein;  99.4 3.6E-10 9.3E-15   84.0  19.1  284   43-383    61-388 (389)
 65 PRK08153 histidinol-phosphate   99.4 3.4E-09 8.5E-14   77.9  23.9  313   13-383    37-368 (370)
 66 PRK07049 methionine gamma-lyas  99.4 1.2E-09 3.1E-14   80.7  21.0  276   53-381    88-426 (427)
 67 PRK08114 cystathionine beta-ly  99.3 2.5E-09 6.4E-14   78.7  22.0  285   43-382    60-394 (395)
 68 PRK05957 aspartate aminotransf  99.3   2E-08   5E-13   73.0  26.4  329   10-381    26-385 (389)
 69 PRK01533 histidinol-phosphate   99.3   5E-09 1.3E-13   76.8  23.3  295   25-385    45-359 (366)
 70 PRK06507 consensus              99.3 1.6E-08 4.1E-13   73.5  25.9  331   14-381    34-398 (400)
 71 PRK05967 cystathionine beta-ly  99.3 3.1E-09 7.8E-14   78.1  21.9  285   43-382    62-389 (392)
 72 PRK06234 methionine gamma-lyas  99.3   4E-09   1E-13   77.4  22.4  286   43-382    62-397 (399)
 73 PRK08362 consensus              99.3 1.5E-08 3.9E-13   73.7  25.2  317   25-384    41-388 (389)
 74 PRK07678 aminotransferase; Val  99.3 9.9E-09 2.5E-13   74.9  24.2  332   24-383    65-451 (451)
 75 PRK00011 glyA serine hydroxyme  99.3 1.1E-08 2.9E-13   74.5  24.4  315   23-381    37-388 (415)
 76 PRK08064 cystathionine beta-ly  99.3   2E-09 5.2E-14   79.2  20.6  285   43-385    52-386 (390)
 77 PRK06107 aspartate aminotransf  99.3 1.2E-08 3.2E-13   74.3  24.6  324   25-383    48-402 (402)
 78 PRK07811 cystathionine gamma-s  99.3 5.4E-09 1.4E-13   76.5  22.2  284   43-381    56-385 (386)
 79 PRK06917 hypothetical protein;  99.3 2.5E-08 6.3E-13   72.4  25.5  335   24-385    49-441 (447)
 80 PRK08861 cystathionine gamma-s  99.3 3.8E-09 9.7E-14   77.5  21.1  286   43-384    51-386 (388)
 81 PRK03244 argD acetylornithine   99.3 7.8E-09   2E-13   75.6  22.6  308   24-383    61-396 (398)
 82 PRK07212 consensus              99.3 2.1E-08 5.4E-13   72.8  24.7  306   25-379    46-377 (378)
 83 PRK07504 O-succinylhomoserine   99.3 5.1E-09 1.3E-13   76.7  21.5  285   43-383    63-397 (397)
 84 PRK07543 consensus              99.3 8.5E-09 2.2E-13   75.3  22.6  318   25-382    46-399 (400)
 85 cd00610 OAT_like Acetyl ornith  99.3 7.6E-09 1.9E-13   75.6  22.1  319   24-379    54-413 (413)
 86 PRK07481 hypothetical protein;  99.3 3.4E-09 8.6E-14   77.9  20.3  334   24-385    60-448 (448)
 87 PRK07482 hypothetical protein;  99.3   3E-08 7.6E-13   71.8  25.1  337   24-387    68-460 (461)
 88 PRK08361 aspartate aminotransf  99.3 4.8E-08 1.2E-12   70.5  26.1  329   11-381    32-389 (390)
 89 PRK05965 hypothetical protein;  99.3 1.7E-08 4.3E-13   73.4  23.5  332   24-384    64-450 (459)
 90 PRK07036 hypothetical protein;  99.3 4.2E-08 1.1E-12   70.9  25.6  330   24-387    69-458 (466)
 91 PRK06056 consensus              99.3 3.2E-08 8.1E-13   71.7  24.8  333   14-383    37-402 (402)
 92 PRK07682 hypothetical protein;  99.3 4.6E-08 1.2E-12   70.7  25.4  313   25-383    35-378 (378)
 93 PRK08069 consensus              99.3 2.6E-08 6.7E-13   72.2  24.1  315   25-378    45-388 (390)
 94 PTZ00094 serine hydroxymethylt  99.3 1.3E-08 3.2E-13   74.2  22.2  322   27-384    46-408 (450)
 95 PRK05166 histidinol-phosphate   99.3 3.9E-08 9.8E-13   71.1  24.6  297   24-380    53-372 (374)
 96 PRK08247 cystathionine gamma-s  99.3 4.9E-09 1.2E-13   76.8  19.9  279   44-383    51-366 (366)
 97 PRK08593 4-aminobutyrate amino  99.3 4.5E-08 1.1E-12   70.7  24.6  322   24-384    63-435 (448)
 98 PRK06148 hypothetical protein;  99.2 2.5E-08 6.3E-13   72.4  23.0  320   24-382   642-1013(1015)
 99 pfam00464 SHMT Serine hydroxym  99.2 5.6E-09 1.4E-13   76.5  19.6  311   24-375    33-380 (380)
100 PRK06105 aminotransferase; Pro  99.2 3.9E-08   1E-12   71.1  23.9  334   24-387    66-455 (460)
101 PRK06460 hypothetical protein;  99.2 8.3E-09 2.1E-13   75.4  20.4  282   43-381    43-374 (375)
102 PRK07582 cystathionine gamma-l  99.2 1.9E-08 4.9E-13   73.1  22.3  281   43-382    51-369 (370)
103 COG0076 GadB Glutamate decarbo  99.2 8.8E-09 2.3E-13   75.2  20.4  278   16-315    67-382 (460)
104 PRK03321 putative aminotransfe  99.2 5.6E-08 1.4E-12   70.1  24.4  302   13-377    24-347 (352)
105 PRK05942 aspartate aminotransf  99.2 4.4E-08 1.1E-12   70.7  23.9  322   14-381    38-392 (394)
106 PRK06375 consensus              99.2 3.9E-08 9.9E-13   71.1  23.5  311   25-381    44-380 (381)
107 PRK07683 aminotransferase A; V  99.2 7.6E-08 1.9E-12   69.3  25.0  327   11-382    28-384 (387)
108 PRK03317 histidinol-phosphate   99.2 9.4E-08 2.4E-12   68.7  25.4  296   27-382    43-366 (369)
109 PRK07050 cystathionine beta-ly  99.2 1.4E-08 3.5E-13   74.0  21.2  284   43-381    63-391 (394)
110 PRK11522 putrescine--2-oxoglut  99.2 3.7E-08 9.4E-13   71.3  23.3  323   24-389   109-468 (468)
111 PRK06173 adenosylmethionine--8  99.2 1.3E-07 3.4E-12   67.7  26.1  312   24-382    62-426 (429)
112 PRK08068 transaminase; Reviewe  99.2 5.9E-08 1.5E-12   70.0  24.1  318   12-376    33-384 (389)
113 PRK07030 adenosylmethionine--8  99.2 1.1E-07 2.8E-12   68.2  25.5  335   24-390    65-456 (467)
114 PRK12381 bifunctional succinyl  99.2 4.2E-08 1.1E-12   70.9  23.3  317   24-391    57-406 (406)
115 PRK06938 diaminobutyrate--2-ox  99.2 5.2E-08 1.3E-12   70.3  23.8  325   24-383    81-462 (464)
116 PRK06108 aspartate aminotransf  99.2 6.9E-08 1.8E-12   69.5  24.3  324   11-379    24-380 (382)
117 PRK05794 consensus              99.2 6.4E-08 1.6E-12   69.7  23.8  319   25-381    45-395 (397)
118 TIGR03540 DapC_direct LL-diami  99.2 1.3E-07 3.4E-12   67.7  25.4  306   25-376    44-381 (383)
119 PRK06176 cystathionine gamma-s  99.2 1.9E-08 4.8E-13   73.1  20.8  281   43-381    48-378 (379)
120 PRK07550 hypothetical protein;  99.2 1.5E-07 3.7E-12   67.5  25.3  319   14-376    33-383 (387)
121 PRK02627 acetylornithine amino  99.2 2.6E-08 6.6E-13   72.2  21.5  308   24-382    57-397 (398)
122 cd00609 AAT_like Aspartate ami  99.2 1.6E-07   4E-12   67.3  25.4  287   46-376    38-349 (350)
123 PRK07908 hypothetical protein;  99.2 9.2E-08 2.4E-12   68.7  24.2  312    9-380    19-345 (346)
124 PRK08574 cystathionine gamma-s  99.2 4.8E-08 1.2E-12   70.5  22.7  284   43-381    51-383 (384)
125 PRK06575 consensus              99.2 8.4E-08 2.2E-12   69.0  24.0  321   25-381    46-398 (399)
126 PRK04152 consensus              99.2 1.9E-07 4.8E-12   66.8  25.5  303   15-379    35-364 (364)
127 PRK05964 adenosylmethionine--8  99.2 8.8E-08 2.2E-12   68.9  23.8  318   24-381    60-420 (421)
128 PRK08117 4-aminobutyrate amino  99.2 3.6E-08 9.2E-13   71.3  21.7  316   24-382    59-428 (429)
129 PRK13034 serine hydroxymethylt  99.2 1.1E-08 2.7E-13   74.7  19.0  312   28-381    47-395 (422)
130 PRK08360 4-aminobutyrate amino  99.2   1E-07 2.6E-12   68.5  24.0  322   24-384    59-429 (443)
131 PRK08134 O-acetylhomoserine am  99.2 7.3E-09 1.9E-13   75.7  17.8  305   44-385    63-431 (433)
132 PRK06348 aspartate aminotransf  99.2 3.7E-07 9.5E-12   64.9  26.5  322   10-376    28-380 (383)
133 PRK06916 adenosylmethionine--8  99.2   1E-07 2.6E-12   68.4  23.6  327   24-382    76-458 (462)
134 PRK09044 consensus              99.2 1.4E-07 3.5E-12   67.6  24.3  314   24-381    60-417 (418)
135 PRK06943 adenosylmethionine--8  99.2 1.4E-07 3.7E-12   67.5  24.4  320   24-383    71-447 (452)
136 PRK07812 O-acetylhomoserine am  99.2   5E-09 1.3E-13   76.8  16.9  304   43-384    67-434 (436)
137 PRK02610 histidinol-phosphate   99.2 1.7E-07 4.4E-12   67.0  24.5  297   25-381    40-368 (369)
138 PRK09148 aminotransferase; Val  99.2 1.5E-07 3.9E-12   67.4  24.2  332   14-389    34-399 (406)
139 PRK11658 UDP-4-amino-4-deoxy-L  99.2 1.7E-07 4.3E-12   67.1  24.3  321   28-379    20-377 (379)
140 COG0079 HisC Histidinol-phosph  99.2 2.2E-07 5.6E-12   66.4  24.9  299   25-381    37-354 (356)
141 PRK06702 O-acetylhomoserine am  99.2 2.4E-08 6.1E-13   72.5  20.0  307   43-384    59-427 (432)
142 PRK08443 consensus              99.2 4.8E-07 1.2E-11   64.2  26.6  312   25-381    44-386 (388)
143 PRK03158 histidinol-phosphate   99.2 1.2E-07 3.1E-12   67.9  23.5  305   15-378    33-358 (359)
144 PRK06082 4-aminobutyrate amino  99.2 2.2E-07 5.6E-12   66.4  24.8  325   24-386    90-457 (460)
145 PRK07367 consensus              99.2 1.3E-07 3.4E-12   67.7  23.6  310   25-380    43-383 (385)
146 pfam01212 Beta_elim_lyase Beta  99.2 1.8E-09 4.5E-14   79.7  13.9  238   18-295     8-273 (288)
147 PRK07810 O-succinylhomoserine   99.2 3.5E-08 8.8E-13   71.4  20.5  285   43-379    71-405 (406)
148 PRK06290 aspartate aminotransf  99.2   6E-07 1.5E-11   63.6  27.1  326   14-381    47-402 (411)
149 PRK06767 methionine gamma-lyas  99.2 4.6E-08 1.2E-12   70.7  21.0  283   43-381    59-385 (386)
150 PRK07046 aminotransferase; Val  99.2 9.2E-08 2.3E-12   68.7  22.4  326   24-383    92-451 (452)
151 PRK08912 hypothetical protein;  99.2 5.2E-07 1.3E-11   64.0  26.1  328   10-380    25-385 (387)
152 PRK07483 hypothetical protein;  99.2 2.5E-07 6.3E-12   66.0  24.4  332   24-385    48-441 (443)
153 pfam01053 Cys_Met_Meta_PP Cys/  99.2 3.5E-08   9E-13   71.4  20.1  280   43-379    50-380 (381)
154 PRK06541 hypothetical protein;  99.2 2.4E-07   6E-12   66.1  24.2  330   24-384    70-458 (460)
155 PRK04612 argD bifunctional N-s  99.2 6.1E-08 1.5E-12   69.9  21.1  313   24-384    58-406 (408)
156 COG3844 Kynureninase [Amino ac  99.2   7E-08 1.8E-12   69.5  21.4  321   36-382    63-403 (407)
157 PRK09276 aspartate aminotransf  99.1 1.1E-07 2.9E-12   68.1  22.4  316   14-376    34-383 (385)
158 PRK07986 adenosylmethionine--8  99.1 1.2E-07 3.1E-12   67.9  22.5  316   24-382    61-424 (428)
159 PRK00451 glycine dehydrogenase  99.1   3E-08 7.7E-13   71.8  19.4  312   43-379   107-448 (449)
160 PRK08466 consensus              99.1 3.2E-07 8.2E-12   65.3  24.6  319   24-383    64-430 (430)
161 PRK06149 hypothetical protein;  99.1 2.6E-07 6.7E-12   65.8  24.0  321   24-381   601-970 (972)
162 PRK07568 aspartate aminotransf  99.1 7.9E-07   2E-11   62.8  26.5  323   14-383    33-394 (396)
163 PRK08248 O-acetylhomoserine am  99.1 5.6E-09 1.4E-13   76.5  15.3  304   43-384    62-430 (431)
164 PRK06062 hypothetical protein;  99.1 1.4E-07 3.6E-12   67.6  22.4  327   24-384    54-431 (434)
165 PRK08133 O-succinylhomoserine   99.1 1.6E-07 4.1E-12   67.2  22.5  283   43-380    59-390 (391)
166 PTZ00125 ornithine aminotransf  99.1 9.2E-08 2.3E-12   68.7  21.2  311   24-382    67-414 (415)
167 PRK07777 aminotransferase; Val  99.1 3.8E-07 9.6E-12   64.8  24.2  324    9-376    22-381 (386)
168 PRK05994 O-acetylhomoserine am  99.1 3.8E-08 9.7E-13   71.2  19.0  301   43-381    61-426 (426)
169 cd00614 CGS_like CGS_like: Cys  99.1 1.5E-07 3.8E-12   67.4  22.0  279   44-379    39-368 (369)
170 PRK05093 argD bifunctional N-s  99.1 2.4E-07 6.1E-12   66.1  22.9  306   24-382    58-401 (403)
171 COG0156 BioF 7-keto-8-aminopel  99.1 4.5E-07 1.1E-11   64.4  24.3  307   19-378    51-387 (388)
172 PRK12403 putative aminotransfe  99.1 3.1E-07   8E-12   65.4  23.5  329   24-383    72-454 (460)
173 cd00378 SHMT Serine-glycine hy  99.1 7.8E-08   2E-12   69.2  20.3  313   23-381    31-385 (402)
174 PRK04635 histidinol-phosphate   99.1 3.2E-07 8.1E-12   65.3  23.4  277   41-379    48-345 (346)
175 PRK03967 histidinol-phosphate   99.1 4.1E-07   1E-11   64.6  24.0  288   25-381    33-334 (337)
176 COG2008 GLY1 Threonine aldolas  99.1 8.2E-08 2.1E-12   69.1  20.3  305   17-378     9-340 (342)
177 PRK07324 transaminase; Validat  99.1   3E-07 7.8E-12   65.4  23.1  284   52-383    66-372 (373)
178 PRK07671 cystathionine beta-ly  99.1 4.6E-08 1.2E-12   70.6  18.7  279   44-380    49-377 (377)
179 PRK08088 4-aminobutyrate amino  99.1 2.3E-07 5.8E-12   66.2  22.3  323   24-383    60-426 (426)
180 COG0399 WecE Predicted pyridox  99.1 3.2E-07 8.1E-12   65.3  23.0  316   27-380    20-372 (374)
181 PRK07309 aromatic amino acid a  99.1   1E-06 2.5E-11   62.2  25.4  328   10-381    29-388 (390)
182 PRK06918 4-aminobutyrate amino  99.1 8.6E-07 2.2E-11   62.6  24.9  320   24-390    73-450 (454)
183 TIGR03588 PseC UDP-4-keto-6-de  99.1 1.9E-07 4.8E-12   66.8  21.5  319   28-378    16-379 (380)
184 PRK05630 adenosylmethionine--8  99.1 4.6E-07 1.2E-11   64.3  23.4  314   24-380    60-421 (423)
185 PRK05613 O-acetylhomoserine am  99.1 1.4E-07 3.5E-12   67.6  20.7  302   43-381    67-436 (437)
186 PRK13360 omega amino acid--pyr  99.1 6.2E-07 1.6E-11   63.5  24.0  322   24-382    63-440 (441)
187 PRK07337 aminotransferase; Val  99.1 1.3E-06 3.3E-11   61.5  25.6  316   25-378    45-386 (388)
188 TIGR01821 5aminolev_synth 5-am  99.1 2.4E-08 6.1E-13   72.4  16.7  307   23-385    61-425 (427)
189 PRK07681 aspartate aminotransf  99.1 9.5E-07 2.4E-11   62.3  24.9  326   14-386    35-395 (399)
190 PRK07894 consensus              99.1 2.1E-07 5.3E-12   66.5  21.5  315   24-382    69-429 (430)
191 PRK04260 acetylornithine amino  99.1 2.5E-07 6.3E-12   66.0  21.8  303   24-379    46-375 (375)
192 PRK07392 threonine-phosphate d  99.1 7.4E-07 1.9E-11   63.0  24.1  307   14-381    25-357 (358)
193 PRK09792 PLP-dependent GABA am  99.1 7.3E-07 1.9E-11   63.0  24.1  319   24-381    58-421 (421)
194 PRK07495 4-aminobutyrate amino  99.1 6.3E-07 1.6E-11   63.4  23.7  323   24-384    56-422 (422)
195 PRK06220 consensus              99.1 1.2E-06   3E-11   61.7  25.1  326   14-383    34-382 (384)
196 PRK07480 putative aminotransfe  99.1   1E-06 2.6E-11   62.1  24.7  327   24-384    71-454 (459)
197 PRK06209 glutamate-1-semialdeh  99.1 4.9E-08 1.2E-12   70.5  17.8  326   24-389    66-413 (431)
198 PRK06084 O-acetylhomoserine am  99.1 1.9E-08 4.8E-13   73.1  15.6  302   43-382    56-423 (424)
199 PRK09264 diaminobutyrate--2-ox  99.1   5E-07 1.3E-11   64.0  22.8  322   24-391    57-426 (426)
200 PRK02936 argD acetylornithine   99.1   3E-07 7.7E-12   65.5  21.5  298   24-379    47-377 (377)
201 PRK07366 succinyldiaminopimela  99.1 1.2E-06   3E-11   61.7  24.5  319   14-376    33-385 (388)
202 TIGR03246 arg_catab_astC succi  99.1 2.9E-07 7.3E-12   65.6  21.3  309   24-382    53-396 (397)
203 PRK03262 consensus              99.1   1E-06 2.6E-11   62.1  24.1  279   41-376    52-351 (355)
204 PRK06358 threonine-phosphate d  99.0 7.7E-07   2E-11   62.9  23.0  294   25-379    34-353 (354)
205 PRK00854 rocD ornithine--oxo-a  99.0 2.1E-07 5.2E-12   66.5  20.0  306   24-380    62-403 (404)
206 PRK04781 histidinol-phosphate   99.0 1.4E-06 3.6E-11   61.2  24.2  282   41-380    52-360 (362)
207 PRK06777 4-aminobutyrate amino  99.0 8.2E-07 2.1E-11   62.7  23.0  320   24-380    58-420 (421)
208 PRK08636 aspartate aminotransf  99.0 1.3E-06 3.3E-11   61.4  23.9  327   14-384    36-403 (403)
209 COG0436 Aspartate/tyrosine/aro  99.0 3.7E-07 9.4E-12   64.9  21.1  328   12-380    29-390 (393)
210 pfam01041 DegT_DnrJ_EryC1 DegT  99.0 4.9E-07 1.2E-11   64.1  21.5  299   47-376    24-363 (363)
211 PRK01688 histidinol-phosphate   99.0 1.8E-06 4.6E-11   60.5  24.4  278   41-376    52-351 (355)
212 TIGR02006 IscS cysteine desulf  99.0 1.4E-07 3.7E-12   67.5  18.7  329   22-384    14-382 (404)
213 PRK05939 hypothetical protein;  99.0 9.1E-08 2.3E-12   68.8  17.6  298   43-380    44-394 (396)
214 PRK07323 consensus              99.0 1.1E-06 2.7E-11   62.0  22.9  313   24-382    76-443 (443)
215 PRK09221 beta alanine--pyruvat  99.0 1.4E-06 3.6E-11   61.2  23.3  212  137-382   217-444 (445)
216 PRK08363 alanine aminotransfer  99.0 2.8E-06 7.1E-11   59.3  24.8  328   14-380    33-393 (398)
217 TIGR02539 SepCysS Sep-tRNA:Cys  99.0 1.7E-08 4.2E-13   73.5  13.2  308   44-381    51-379 (381)
218 COG0112 GlyA Glycine/serine hy  99.0   3E-07 7.6E-12   65.5  19.6  313   28-383    42-392 (413)
219 PRK06434 cystathionine gamma-l  99.0 3.4E-07 8.6E-12   65.2  19.7  281   43-381    62-384 (384)
220 PRK02769 histidine decarboxyla  99.0 6.5E-07 1.7E-11   63.3  21.1  295   29-376    47-367 (380)
221 PRK06931 diaminobutyrate--2-ox  99.0 2.9E-06 7.3E-11   59.2  24.3  323   24-383    71-451 (454)
222 TIGR03372 putres_am_tran putre  99.0 3.5E-07 8.8E-12   65.1  19.6  313   24-379    93-442 (442)
223 PRK06836 aspartate aminotransf  99.0 2.5E-06 6.4E-11   59.6  23.8  326   13-383    36-394 (396)
224 TIGR03537 DapC succinyldiamino  99.0 3.3E-06 8.5E-11   58.8  26.1  303   25-376    15-348 (350)
225 COG0160 GabT 4-aminobutyrate a  99.0 2.2E-06 5.7E-11   59.9  23.5  320   24-382    74-446 (447)
226 cd00616 AHBA_syn 3-amino-5-hyd  99.0 5.2E-07 1.3E-11   64.0  20.2  309   28-376     5-352 (352)
227 PRK03715 argD bifunctional N-s  99.0 1.8E-06 4.6E-11   60.5  22.9  308   24-382    54-394 (395)
228 PRK00062 glutamate-1-semialdeh  99.0 8.5E-07 2.2E-11   62.6  21.0  323   24-383    70-428 (429)
229 COG4992 ArgD Ornithine/acetylo  99.0 5.6E-07 1.4E-11   63.7  19.8  312   24-384    60-401 (404)
230 PRK05639 4-aminobutyrate amino  99.0 3.5E-06 8.8E-11   58.7  23.8  320   24-384    71-446 (457)
231 PRK00615 glutamate-1-semialdeh  99.0 6.2E-07 1.6E-11   63.5  20.0  322   24-382    71-429 (433)
232 pfam00282 Pyridoxal_deC Pyrido  99.0 5.5E-07 1.4E-11   63.8  19.6  283   15-313    44-370 (370)
233 cd00613 GDC-P Glycine cleavage  99.0 2.2E-06 5.5E-11   60.0  22.5  327   25-375    35-398 (398)
234 PRK06058 4-aminobutyrate amino  99.0 6.4E-07 1.6E-11   63.4  19.8  291   52-382   103-446 (446)
235 PRK05769 4-aminobutyrate amino  99.0 1.8E-06 4.5E-11   60.6  22.0  313   24-382    73-441 (442)
236 PRK09082 putative aminotransfe  99.0 4.5E-06 1.1E-10   58.0  24.8  322   10-375    29-383 (386)
237 PRK07269 cystathionine gamma-s  99.0 8.1E-07 2.1E-11   62.7  20.1  276   43-379    52-362 (364)
238 PRK08742 adenosylmethionine--8  99.0 4.7E-06 1.2E-10   57.9  25.6  326   24-383    82-469 (472)
239 PRK11706 TDP-4-oxo-6-deoxy-D-g  98.9   3E-06 7.7E-11   59.1  22.8  317   27-379    16-374 (375)
240 PRK06959 putative threonine-ph  98.9 3.8E-06 9.8E-11   58.4  23.3  268   51-385    56-337 (339)
241 PRK08175 aminotransferase; Val  98.9 5.1E-06 1.3E-10   57.6  26.6  313   25-381    44-389 (395)
242 PRK12389 glutamate-1-semialdeh  98.9 3.1E-07 7.9E-12   65.4  17.5  321   24-382    71-428 (429)
243 COG0626 MetC Cystathionine bet  98.9 1.2E-06 3.1E-11   61.6  19.8  289   40-382    58-395 (396)
244 PRK06942 glutamate-1-semialdeh  98.9 6.7E-07 1.7E-11   63.3  18.4  319   24-382    68-425 (425)
245 PRK08960 hypothetical protein;  98.9   7E-06 1.8E-10   56.8  25.9  323   14-379    35-385 (387)
246 PRK13580 serine hydroxymethylt  98.9 8.1E-07 2.1E-11   62.7  18.3  313   27-383    66-449 (493)
247 PRK05664 threonine-phosphate d  98.9 4.3E-06 1.1E-10   58.1  21.9  260   52-382    53-328 (330)
248 PRK08056 threonine-phosphate d  98.9 2.2E-06 5.7E-11   59.9  20.5  296   25-380    35-354 (356)
249 PRK01278 argD bifunctional N-s  98.9 2.1E-06 5.4E-11   60.1  20.2  302   24-381    49-388 (389)
250 PRK06425 histidinol-phosphate   98.9 6.3E-06 1.6E-10   57.1  22.5  276   41-379    35-331 (332)
251 TIGR01141 hisC histidinol-phos  98.9 3.9E-06 9.8E-11   58.4  21.3  297   25-377    43-376 (377)
252 COG1103 Archaea-specific pyrid  98.9 8.2E-07 2.1E-11   62.7  17.8  296   50-379    63-378 (382)
253 PRK04073 rocD ornithine--oxo-a  98.9   6E-06 1.5E-10   57.2  22.2  300   24-379    58-395 (396)
254 PRK08555 consensus              98.8 5.6E-06 1.4E-10   57.4  21.3  313   24-381    70-442 (443)
255 pfam01276 OKR_DC_1 Orn/Lys/Arg  98.8   3E-06 7.7E-11   59.1  19.6  218   47-291    65-318 (417)
256 PRK08297 L-lysine aminotransfe  98.8 1.4E-05 3.5E-10   54.9  23.1  296   41-382    94-448 (449)
257 PRK07778 consensus              98.8 1.6E-05 4.2E-10   54.4  23.5  321   13-376    32-381 (386)
258 TIGR01825 gly_Cac_T_rel pyrido  98.8 6.6E-06 1.7E-10   56.9  20.1  310   24-383    49-390 (392)
259 PRK08354 putative aminotransfe  98.7 2.4E-05 6.1E-10   53.4  24.1  275   26-376    23-307 (312)
260 PRK09265 aminotransferase AlaT  98.7 2.5E-05 6.3E-10   53.3  24.8  324   25-383    51-403 (404)
261 TIGR01885 Orn_aminotrans ornit  98.7 1.3E-05 3.2E-10   55.1  20.1  307   24-376    60-423 (426)
262 cd00615 Orn_deC_like Ornithine  98.7 2.3E-06 5.9E-11   59.8  15.5  213   47-288    58-293 (294)
263 TIGR01822 2am3keto_CoA 2-amino  98.7 2.3E-06 5.9E-11   59.9  15.1  305   19-382    52-392 (395)
264 TIGR03539 DapC_actino succinyl  98.7 3.7E-05 9.3E-10   52.2  25.0  299   14-370    24-351 (357)
265 TIGR01326 OAH_OAS_sulfhy O-ace  98.7 2.4E-07   6E-12   66.1   9.1  219   58-295    64-325 (434)
266 KOG1404 consensus               98.6 4.3E-05 1.1E-09   51.8  20.2  327   24-385    68-441 (442)
267 COG2873 MET17 O-acetylhomoseri  98.6 1.9E-05 4.8E-10   54.0  17.6  285   70-381    80-425 (426)
268 PRK12414 putative aminotransfe  98.6 6.4E-05 1.6E-09   50.7  24.0  319   10-373    28-379 (384)
269 TIGR03538 DapC_gpp succinyldia  98.6   7E-05 1.8E-09   50.4  25.8  315   14-376    32-391 (394)
270 TIGR03251 LAT_fam L-lysine 6-t  98.6 7.5E-05 1.9E-09   50.2  20.1  292   41-378    78-431 (431)
271 KOG0257 consensus               98.6 5.2E-05 1.3E-09   51.2  19.1  331   16-390    36-410 (420)
272 PRK08637 hypothetical protein;  98.6 8.3E-05 2.1E-09   49.9  22.8  296   43-383    46-386 (386)
273 COG0161 BioA Adenosylmethionin  98.5 0.00011 2.7E-09   49.2  22.0  324   24-385    62-447 (449)
274 PRK09147 aminotransferase; Pro  98.5 0.00012   3E-09   49.0  24.1  316   14-378    32-394 (397)
275 KOG0053 consensus               98.5 1.2E-05   3E-10   55.4  13.6  205   51-294    80-298 (409)
276 KOG1402 consensus               98.5 0.00015 3.9E-09   48.3  19.1  308   24-379    77-425 (427)
277 KOG1360 consensus               98.4 8.5E-05 2.2E-09   49.9  17.3  307   24-386   187-529 (570)
278 KOG1359 consensus               98.4 2.6E-05 6.7E-10   53.1  14.5  316   14-382    70-413 (417)
279 TIGR03542 DAPAT_plant LL-diami  98.4 6.6E-05 1.7E-09   50.6  16.6  326   14-378    36-401 (402)
280 TIGR02407 ectoine_ectB diamino  98.4 1.9E-05 4.9E-10   54.0  13.8  282   44-380    81-412 (413)
281 COG1167 ARO8 Transcriptional r  98.4 0.00022 5.5E-09   47.3  25.9  327   11-382    89-456 (459)
282 KOG2467 consensus               98.4 7.5E-05 1.9E-09   50.2  15.8  323   42-384    79-429 (477)
283 COG0001 HemL Glutamate-1-semia  98.4 0.00027 6.8E-09   46.7  18.4  297   55-384   100-431 (432)
284 TIGR01437 selA_rel pyridoxal p  98.4 3.2E-05 8.1E-10   52.6  13.6  327   19-380    22-388 (391)
285 PRK09440 avtA valine--pyruvate  98.3  0.0003 7.7E-09   46.4  26.0  335    5-382    24-412 (416)
286 PRK06855 aminotransferase; Val  98.3 0.00034 8.7E-09   46.1  21.8  253   24-299    49-334 (433)
287 COG1982 LdcC Arginine/lysine/o  98.3 0.00024 6.1E-09   47.0  16.9  289   49-376    71-403 (557)
288 KOG1401 consensus               98.3 0.00037 9.6E-09   45.8  20.7  325   17-382    69-431 (433)
289 pfam02347 GDC-P Glycine cleava  98.3 0.00045 1.1E-08   45.3  20.5  301   46-374   108-428 (429)
290 TIGR01329 cysta_beta_ly_E cyst  98.2 9.5E-05 2.4E-09   49.6  14.1  216   41-296    44-286 (415)
291 PRK04013 argD acetylornithine/  98.2  0.0003 7.6E-09   46.4  16.4  287   24-382    42-361 (364)
292 KOG1357 consensus               98.2 0.00019 4.7E-09   47.7  15.3  316   17-382   152-503 (519)
293 PRK09257 aromatic amino acid a  98.2 0.00052 1.3E-08   44.9  18.6  313   10-379    25-396 (397)
294 PRK07590 L,L-diaminopimelate a  98.2 0.00054 1.4E-08   44.8  20.8  329   12-376    35-406 (409)
295 KOG1368 consensus               98.2  0.0004   1E-08   45.6  16.7  308   22-383    32-370 (384)
296 TIGR00707 argD acetylornithine  98.2 0.00056 1.4E-08   44.7  20.2  310   24-379    47-401 (402)
297 pfam00202 Aminotran_3 Aminotra  98.2 0.00014 3.7E-09   48.4  14.0  235   24-290    34-316 (338)
298 PRK07865 N-succinyldiaminopime  98.2 0.00067 1.7E-08   44.2  26.3  306   13-375    29-362 (364)
299 KOG3846 consensus               98.1 0.00079   2E-08   43.7  16.6  329   40-382   101-462 (465)
300 pfam03841 SelA L-seryl-tRNA se  98.1  0.0007 1.8E-08   44.1  15.4  187   19-217    14-236 (367)
301 COG1921 SelA Selenocysteine sy  98.1 0.00055 1.4E-08   44.7  14.8  214   20-266    36-272 (395)
302 TIGR01328 met_gam_lyase methio  98.1 3.1E-05 7.9E-10   52.7   8.4  209   43-294    57-282 (392)
303 COG0403 GcvP Glycine cleavage   98.0  0.0013 3.3E-08   42.4  20.2  307   46-378   118-447 (450)
304 PRK05839 hypothetical protein;  98.0  0.0014 3.7E-08   42.1  26.3  307   14-376    27-369 (376)
305 COG1448 TyrB Aspartate/tyrosin  97.9 0.00076   2E-08   43.8  13.8  260   70-378    97-395 (396)
306 COG1168 MalY Bifunctional PLP-  97.8  0.0027 6.9E-08   40.3  17.9  308   24-376    40-385 (388)
307 PRK13578 ornithine decarboxyla  97.8  0.0035 8.8E-08   39.7  21.7  302   49-376   175-560 (720)
308 TIGR01814 kynureninase kynuren  97.6  0.0031   8E-08   39.9  12.8  316   43-379    81-443 (444)
309 PRK04311 selenocysteine syntha  97.5   0.008   2E-07   37.3  18.0  158   51-217   132-318 (465)
310 TIGR01265 tyr_nico_aTase tyros  97.5  0.0099 2.5E-07   36.8  16.3  281   56-376   102-417 (424)
311 PRK04366 glycine dehydrogenase  97.4    0.01 2.6E-07   36.6  19.8  313   45-384   112-454 (490)
312 TIGR01325 O_suc_HS_sulf O-succ  97.4  0.0015 3.7E-08   42.1   8.6  230   45-317    54-311 (386)
313 PRK13355 bifunctional HTH-doma  97.3   0.015 3.8E-07   35.6  22.0  279   68-380   210-513 (518)
314 PRK12566 glycine dehydrogenase  97.0   0.028 7.1E-07   33.9  21.4  292   51-375   127-438 (954)
315 PRK05367 glycine dehydrogenase  96.9   0.037 9.5E-07   33.1  19.6  293   51-376   128-441 (955)
316 KOG0256 consensus               96.9   0.039 9.9E-07   33.0  20.1  303   40-380   120-460 (471)
317 TIGR00713 hemL glutamate-1-sem  96.7   0.047 1.2E-06   32.4  12.9  212  137-381   199-433 (434)
318 TIGR00474 selA L-seryl-tRNA se  96.6   0.057 1.5E-06   31.9  13.3  300   37-376   104-447 (448)
319 TIGR00709 dat 2,4-diaminobutyr  95.8    0.15 3.8E-06   29.3  12.8  325   28-385    60-442 (445)
320 KOG0629 consensus               95.8    0.15 3.9E-06   29.2  15.5  338   26-379   120-507 (510)
321 KOG1358 consensus               95.4    0.21 5.4E-06   28.3  17.0  288   49-378   140-462 (467)
322 KOG0259 consensus               94.8    0.32 8.1E-06   27.2  20.8  275   70-376   129-428 (447)
323 pfam05889 SLA_LP_auto_ag Solub  94.7    0.33 8.4E-06   27.1  14.5  166   43-210    51-240 (389)
324 TIGR01324 cysta_beta_ly_B cyst  94.6    0.37 9.4E-06   26.8  13.6  296   39-380    49-387 (389)
325 KOG2040 consensus               94.0    0.49 1.2E-05   26.0  12.3  283   56-375   171-477 (1001)
326 TIGR02080 O_succ_thio_ly O-suc  92.9    0.73 1.9E-05   24.9  10.3  286   39-381    45-382 (383)
327 pfam06838 Alum_res Aluminium r  92.5    0.81 2.1E-05   24.6  12.6  260   27-316    29-322 (405)
328 TIGR03576 pyridox_MJ0158 pyrid  92.1    0.92 2.3E-05   24.3  20.7  258   43-359    52-324 (346)
329 KOG1383 consensus               90.6     1.3 3.3E-05   23.4  18.8  303   44-385   116-450 (491)
330 KOG1411 consensus               90.1     1.4 3.6E-05   23.1  11.3  260   71-381   126-425 (427)
331 TIGR03531 selenium_SpcS O-phos  90.0     1.4 3.7E-05   23.0  19.3  165   43-209   100-289 (444)
332 pfam04864 Alliinase_C Allinase  89.1     1.7 4.3E-05   22.6  22.8  292   49-376    47-360 (363)
333 TIGR01788 Glu-decarb-GAD gluta  83.1     3.4 8.7E-05   20.6  18.5  316   44-380    84-490 (493)
334 KOG0634 consensus               71.3     7.5 0.00019   18.5  19.7  165   44-213   100-315 (472)
335 COG1003 GcvP Glycine cleavage   70.6     7.7  0.0002   18.4  20.5  314   46-385   107-451 (496)
336 cd01013 isochorismatase Isocho  69.1     7.6 0.00019   18.4   3.9  122   51-177    53-183 (203)
337 TIGR00461 gcvP glycine dehydro  68.4     8.6 0.00022   18.1  10.0  271   74-376   137-444 (965)
338 TIGR02237 recomb_radB DNA repa  67.9     6.1 0.00015   19.0   3.2   94   73-180    21-121 (223)
339 KOG0628 consensus               67.9     8.8 0.00023   18.0  17.4  317   43-384   108-474 (511)
340 KOG1412 consensus               62.8      11 0.00028   17.4  14.0  325   10-385    29-409 (410)
341 PRK13942 protein-L-isoaspartat  62.6      11 0.00028   17.4   7.7   69   54-123    65-135 (214)
342 COG1611 Predicted Rossmann fol  60.5      12 0.00031   17.1   4.5   52   40-95     23-74  (205)
343 pfam09659 Cas_Csm6 CRISPR-asso  51.5      17 0.00043   16.2   4.7   49   40-91     17-67  (382)
344 TIGR01264 tyr_amTase_E tyrosin  49.7      18 0.00046   16.0   5.4  322   12-370    41-406 (415)
345 TIGR01140 CobD L-threonine-O-3  49.4      18 0.00047   16.0  18.5  306   13-377     7-348 (349)
346 PRK07206 hypothetical protein;  43.5      23 0.00057   15.4   3.0   16  162-177   199-214 (415)
347 cd01394 radB RadB. The archaea  42.2      24  0.0006   15.3   3.1   20  161-180   102-121 (218)
348 PRK13972 glutathione S-transfe  41.2      18 0.00046   16.0   1.9   22  269-290   126-147 (215)
349 cd00617 Tnase_like Tryptophana  39.7      26 0.00066   15.1  12.8  300   41-383    50-410 (431)
350 cd03148 GATase1_EcHsp31_like T  39.3      26 0.00067   15.0   2.6   34   97-132    20-56  (232)
351 pfam01135 PCMT Protein-L-isoas  38.1      27  0.0007   14.9   7.7   70   53-123    61-132 (205)
352 cd00764 Eukaryotic_PFK Phospho  38.0      27  0.0007   14.9   4.5   77   40-116   360-444 (762)
353 COG3977 Alanine-alpha-ketoisov  37.9      27  0.0007   14.9  19.2  332    7-382    26-416 (417)
354 COG4100 Cystathionine beta-lya  37.9      27  0.0007   14.9   5.3  182   28-215    40-257 (416)
355 pfam04048 Sec8_exocyst Sec8 ex  37.8      28  0.0007   14.9   4.3   34   29-62     28-61  (142)
356 PRK13534 7-cyano-7-deazaguanin  37.5      28 0.00071   14.9   2.4   95    3-120    22-120 (630)
357 pfam10100 DUF2338 Uncharacteri  36.7      29 0.00073   14.8   5.2  111   15-126     6-149 (429)
358 TIGR00462 genX lysyl-tRNA synt  34.2      31  0.0008   14.5   3.2   23   43-65    126-148 (330)
359 TIGR00763 lon ATP-dependent pr  33.5      14 0.00036   16.8   0.4   86   25-113   504-612 (941)
360 pfam01209 Ubie_methyltran ubiE  33.5      32 0.00082   14.4   6.1   55   54-111    36-90  (233)
361 TIGR00700 GABAtrnsam 4-aminobu  33.4      32 0.00082   14.4  11.1  206  138-379   200-425 (427)
362 TIGR00954 3a01203 Peroxysomal   33.4      17 0.00043   16.2   0.8   27  182-208   555-586 (788)
363 smart00828 PKS_MT Methyltransf  33.0      33 0.00084   14.4   2.5   37  160-197    95-131 (224)
364 pfam00996 GDI GDP dissociation  32.9      33 0.00084   14.4   2.6   41   64-107     2-45  (439)
365 TIGR02478 6PF1K_euk 6-phosphof  31.9      34 0.00087   14.3   2.5  160   41-214   369-559 (777)
366 PRK08085 gluconate 5-dehydroge  31.3      35 0.00089   14.2   2.1   38   58-97      2-39  (254)
367 PRK08317 hypothetical protein;  31.3      35 0.00089   14.2   6.4   47   50-97      4-50  (241)
368 TIGR01393 lepA GTP-binding pro  29.6      20 0.00052   15.7   0.7   39   50-89    140-182 (598)
369 KOG1201 consensus               29.6      37 0.00095   14.0   5.0  162   47-212    15-194 (300)
370 PRK08277 D-mannonate oxidoredu  28.3      39   0.001   13.9   4.6   63   57-122     2-66  (278)
371 TIGR00928 purB adenylosuccinat  28.0      33 0.00084   14.4   1.5   46   35-84    156-209 (469)
372 TIGR02442 Cob-chelat-sub cobal  27.8      25 0.00064   15.1   0.9   43  164-206   511-571 (688)
373 pfam06070 Herpes_UL32 Herpesvi  27.7      40   0.001   13.8  11.8   20   41-60    255-274 (777)
374 TIGR02081 metW methionine bios  27.7      25 0.00063   15.2   0.8   92   56-153     3-99  (205)
375 PRK10294 6-phosphofructokinase  27.6      41   0.001   13.8   6.4   48   73-121    36-84  (309)
376 PRK06935 2-deoxy-D-gluconate 3  27.4      41   0.001   13.8   5.2   37   59-97      9-45  (258)
377 pfam01488 Shikimate_DH Shikima  27.0      42  0.0011   13.7   7.6  110   56-181     2-113 (134)
378 TIGR00438 rrmJ ribosomal RNA l  26.5      42  0.0011   13.7   2.4   94   85-188    27-130 (192)
379 cd03062 TRX_Fd_Sucrase TRX-lik  25.4      44  0.0011   13.6   3.2   33  344-376    46-83  (97)
380 pfam04127 DFP DNA / pantothena  24.4      46  0.0012   13.4   3.7   76   97-178    26-101 (197)
381 PRK08213 gluconate 5-dehydroge  24.2      47  0.0012   13.4   4.2   40   56-97      3-42  (259)
382 cd00411 Asparaginase Asparagin  24.2      47  0.0012   13.4   5.0   55   40-100    58-113 (323)
383 pfam06745 KaiC KaiC. This fami  24.0      47  0.0012   13.4   2.1   58   56-113     7-71  (231)
384 PRK07097 gluconate 5-dehydroge  23.9      47  0.0012   13.4   2.8   39   57-97      2-40  (265)
385 PRK06171 sorbitol-6-phosphate   23.7      48  0.0012   13.4   2.0   38   58-97      2-39  (266)
386 PRK13533 7-cyano-7-deazaguanin  23.2      49  0.0012   13.3   2.8   66    3-80     23-92  (486)
387 TIGR01931 cysJ sulfite reducta  22.9      35 0.00088   14.3   0.8  155  168-376   447-618 (628)
388 TIGR01133 murG undecaprenyldip  22.4      50  0.0013   13.2   1.6   24   68-91      6-32  (368)
389 PRK08367 porA pyruvate ferredo  22.2      51  0.0013   13.2   6.3   27  354-380   350-377 (395)
390 PRK09275 aspartate aminotransf  22.1      47  0.0012   13.4   1.4  317   58-388   154-528 (531)
391 KOG4044 consensus               21.9      44  0.0011   13.6   1.2   51  130-180    97-147 (201)
392 TIGR02347 chap_CCT_zeta T-comp  21.6      53  0.0013   13.1   2.8   63  280-345   357-421 (548)
393 TIGR00611 recf DNA replication  21.5      32 0.00083   14.4   0.5   74  279-361   230-305 (399)
394 PRK13397 3-deoxy-7-phosphohept  21.5      53  0.0013   13.1   9.0  164    1-179     1-200 (250)
395 KOG4181 consensus               21.3      33 0.00084   14.4   0.5   30  359-388   395-424 (491)
396 KOG1405 consensus               20.7      55  0.0014   13.0  10.4  202  138-380   271-482 (484)
397 cd01015 CSHase N-carbamoylsarc  20.7      27  0.0007   14.9  -0.1   78   97-175    71-153 (179)
398 PRK13943 protein-L-isoaspartat  20.6      55  0.0014   13.0   7.8   70   53-123    63-134 (317)
399 TIGR02153 gatD_arch glutamyl-t  20.5      55  0.0014   12.9   4.2  115   45-179   127-249 (413)
400 PRK06416 dihydrolipoamide dehy  20.3      56  0.0014   12.9   3.3   32   92-124   173-205 (462)
401 TIGR02774 rexB_recomb ATP-depe  20.1      56  0.0014   12.9   2.0   37  162-198   185-229 (1116)

No 1  
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00  E-value=0  Score=659.27  Aligned_cols=379  Identities=56%  Similarity=0.973  Sum_probs=355.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
Q ss_conf             98765564689988868887768968999986321036532898899999999999999968899857999748734899
Q gi|254780153|r    1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAV   80 (391)
Q Consensus         1 ~~~~~~~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~   80 (391)
                      |+..-+|.++|.+|+||+|||.++|+|.+.++..++||+||||++|.+++++++++||+||++|+||+|+|+|||||+||
T Consensus         1 ~~~~~~~~~~P~~~~F~~GPs~~~p~~~l~~l~~sile~SHRs~~f~~i~~~a~~~lr~Ll~iPddY~Vlfl~GGaT~qf   80 (381)
T PRK03080          1 MTLTIPPALRPADPRFSSGPCKKRPGWSLDALADALLGRSHRQAPGKAKLGEAIDGTRELLSLPADYEVGIVPGSDTGAV   80 (381)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf             98778965679999968888388810216661531112762773899999999999999958999847999678467999


Q ss_pred             HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCC-CCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEEC
Q ss_conf             9875320578970799707368888876532387-630674057776578676785565799742024202203203502
Q gi|254780153|r   81 EMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSL-QDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIP  159 (391)
Q Consensus        81 ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~  159 (391)
                      +++++||++++...++++|.||++|++++.+... .++.+...++|..+++..++...++++|||||++|++.|....++
T Consensus        81 ~~i~~nLl~~~~~~~~~~G~fs~kwa~~a~~~~~~~~~~v~~a~~g~iP~~~~~~~~~d~~~t~NeTi~Gv~~p~~~~~~  160 (381)
T PRK03080         81 EMALWSLLGARRVDHLAWESFGAKWATDVVKQLKLEDPRVLKADYGELPDLSAVDFDVDVVFTWNGTTSGVRVPNADWIG  160 (381)
T ss_pred             HHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCCCEEEEECCCEEEEECCCCCCCC
T ss_conf             99987455777772787431446999999974366761587057777888123376564798735640108746767788


Q ss_pred             CCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf             56861488640110110254556857999700120017665154456778887654114457783123200112321033
Q gi|254780153|r  160 ESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL  239 (391)
Q Consensus       160 ~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (391)
                      ...+.++|+||+|+++++|+|++++|++|+|+|||||+|+|++++++||+|++|.+...+.+++|.+|+|..+.++.++.
T Consensus       161 ~~~~~llv~D~SS~i~s~~iD~sk~dviyagaQKnlG~~aGl~vvI~sp~al~r~~~~~~~r~iP~~l~~~~~~~a~e~~  240 (381)
T PRK03080        161 ADREGLTICDATSAAFALPLDWAKLDVYTFSWQKVLGGEGGHGMLILSPRAVERLESYAPAWPLPKIFRLTKGGKLIENI  240 (381)
T ss_pred             CCCCCCEEEECHHHHCCCCCCHHHCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             88886278743244436767855742799870002578774279997699998886138877884464245578887646


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf             47864466644889999999986201031899999999779999999874797167668820036531789824731011
Q gi|254780153|r  240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS  319 (391)
Q Consensus       240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~  319 (391)
                      .++||+||||++.||.+..+|+|++++||++++.+|++++++.||+|+|+++++.+++.+++.||++|+||++.|+.   
T Consensus       241 ~~~s~~NTPp~f~iy~~~~~l~Wl~~~GGl~~~~~rn~~ka~lLY~~id~s~~~~~~v~d~~~RS~~nv~f~~~d~~---  317 (381)
T PRK03080        241 FKGQTINTPSMLTVEDYLDQLDWAKSIGGLDALIARTAANSSVLYDWAEKTPWATPLAADPATRSNTSVCLDFVDPA---  317 (381)
T ss_pred             HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCH---
T ss_conf             53464899618999999999999997288999999999999999999970887433668844523764899945805---


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             373456788899999888628287266556767505686158889999999999999999999998
Q gi|254780153|r  320 LDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       320 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                         ..+..+.+.+...+++|+++++++|||+...|||||+|++++.+||++|+.||||+|.++|..
T Consensus       318 ---~~~~~~~~~~~~~l~~e~g~~di~ghR~~~~GlR~s~y~av~~~dv~aL~~~ld~~~~~~~~~  380 (381)
T PRK03080        318 ---DAQAAFDKALVAKLLRENGAVDIGPYRDAPNGLRIWCGATVEPSDVEALTPWLDWAFERLKAA  380 (381)
T ss_pred             ---HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             ---547999999999999829874565535689855888327789999999999999999998600


No 2  
>TIGR01364 serC_1 phosphoserine aminotransferase; InterPro: IPR003248  Phosphoserine aminotransferases (2.6.1.52 from EC) catalyse the conversion of O-phospho-L-serine and oxoglutarate to 3-phosphonooxypyruvate and L-glutamate in the major phosphorylated serine biosynthesis pathway. In bacteria it is also equired for the biosynthesis of pyridoxine. The enzyme requires pyridoxal phosphate as a cofactor, and is part of the aminotransferase class-V family.; GO: 0006564 L-serine biosynthetic process.
Probab=100.00  E-value=0  Score=581.01  Aligned_cols=347  Identities=22%  Similarity=0.310  Sum_probs=301.2

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf             88688877689689999863210----------36532898899999999999999968899857999748734899987
Q gi|254780153|r   14 PFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA   83 (391)
Q Consensus        14 ~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~   83 (391)
                      -||+|||+.+ |+.||+.++.++          ||+||||++|.+|+.++.++||+|+++||+|+|+|||||||+||.++
T Consensus         2 ~NF~AGPA~L-P~~VL~~aq~Ellnf~~~G~SVmEiSHRsk~F~~v~~~Ae~dlR~LL~iPd~Y~vLFLQGGAt~QFa~~   80 (391)
T TIGR01364         2 YNFSAGPAAL-PEEVLEQAQKELLNFNGLGMSVMEISHRSKEFEAVASEAESDLRELLNIPDNYEVLFLQGGATTQFAAV   80 (391)
T ss_pred             CCCCCCCCCC-CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
T ss_conf             4478872227-888999999998657517976699853868999999999999998824799826898738724689999


Q ss_pred             HHHCCC--CCC------EEEEEECCHHHHHHHHHHHCCC---CCEEEE-----ECCCCCCCCHHHCCCC---CCEEEEE-
Q ss_conf             532057--897------0799707368888876532387---630674-----0577765786767855---6579974-
Q gi|254780153|r   84 LWSLLG--YRG------VDVLAWESFGLGWMSDIRQLSL---QDVREF-----TAPYGSLPDFSKVDFD---RDVVFVW-  143 (391)
Q Consensus        84 ~~nl~~--~~~------~~~~~~g~~~~r~~~~~~~~~~---~~~~~~-----~~~~g~~~~~~~~~~~---~~v~~~h-  143 (391)
                      |+||+.  +++      +.++++|.||.++++++.+++.   .++.+.     +..++.+|+.+.|+..   ++.+|+| 
T Consensus        81 PlNL~~~~~~~~GK~~~A~Y~~TG~WS~kA~~EA~~~~~~~G~~v~~~~~~~~~~~y~~iP~~~~w~~~~~G~~~~Yvh~  160 (391)
T TIGR01364        81 PLNLLAAKEGKNGKILVADYIVTGAWSKKALKEAKKLGNPLGVEVNVVASGEEEGNYTKIPDQSEWEISEDGEDAAYVHY  160 (391)
T ss_pred             HHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             99889753699985788500221758899999988604304656776142000578642777021232778787466572


Q ss_pred             --EECCCCEEEC-CEEEECC-CCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC--
Q ss_conf             --2024202203-2035025-686148864011011025455685799970012001766515445677888765411--
Q gi|254780153|r  144 --NGTTSGVCVP-DVGFIPE-SREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY--  217 (391)
Q Consensus       144 --~ETstGv~~~-~~~~~~~-~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~--  217 (391)
                        |||..||+.+ ..+.... ..+++||+|++|+|.++|+|+.++|++|||+|||+ ||+|+++|+++++.|+|....  
T Consensus       161 c~NETi~Gvef~P~~P~~~~~~Pn~~LVaDmSS~ilSR~~Dvs~fglIYAGAQKN~-GpaG~TvVIvR~DLLgr~~~~~L  239 (391)
T TIGR01364       161 CANETIHGVEFRPELPEVKNKDPNAPLVADMSSNILSRPIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASDAEL  239 (391)
T ss_pred             CCCCCCCCEEECCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCEEEEEHHHCC-CCCEEEEEEECCHHHCCCCCCCH
T ss_conf             57871102166476886788897526885154323157678511355750032120-53226899981144156762302


Q ss_pred             --CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             --445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r  218 --VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN  295 (391)
Q Consensus       218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~  295 (391)
                        -.-...|+.|+|..+.+      ++|++||||||.||.+.++++|++++||++++.+++++||++||+.||++++|+.
T Consensus       240 H~L~vP~~P~~~~Y~~~~~------~~SmYNTPPtF~iY~~~LVf~Wlk~~GGv~~~e~~N~~KA~LLY~~ID~S~gFY~  313 (391)
T TIGR01364       240 HKLGVPITPSMLNYKIHAE------NDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDAIDNSNGFYR  313 (391)
T ss_pred             HHCCCCCCCCCCCHHHHHH------CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             0166659784132189886------3887334025899987889999986062899999989999999999864898011


Q ss_pred             CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             66882003653178982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r  296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      ...+|+.||.|||||++++..   .+.+.+..|+++.     ++.+.++|+|||++| |||+|.||+++.|.|++|++.+
T Consensus       314 ~~v~k~~RS~MNV~F~~~~~~---G~~eLe~~Fl~eA-----~~~gl~~LKGHRsVG-G~RASiYNA~ple~Vq~Lv~FM  384 (391)
T TIGR01364       314 NPVDKRARSLMNVVFTLPNEK---GDEELEKEFLKEA-----EERGLVGLKGHRSVG-GMRASIYNALPLEGVQALVDFM  384 (391)
T ss_pred             CCCCHHHCCCCCEEEECCCCC---CCHHHHHHHHHHH-----HHCCCHHCCCCCEEC-CEEEEHHCCCCHHHHHHHHHHH
T ss_conf             643754267464221378877---8555548999999-----970500127630331-2521011176889999999999


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r  376 RW  377 (391)
Q Consensus       376 e~  377 (391)
                      ++
T Consensus       385 ~~  386 (391)
T TIGR01364       385 KE  386 (391)
T ss_pred             HH
T ss_conf             99


No 3  
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT).  PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00  E-value=0  Score=548.09  Aligned_cols=334  Identities=24%  Similarity=0.348  Sum_probs=291.0

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf             8868887768968999986321----------036532898899999999999999968899857999748734899987
Q gi|254780153|r   14 PFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA   83 (391)
Q Consensus        14 ~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~   83 (391)
                      .||++||+.+|++ |++.++++          +||+||||++|.+++++++++||+||++|++|+|+|+|||||+||+++
T Consensus         1 ~NF~aGPa~lp~~-Vl~~~~~e~~~~~~~G~sile~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y~Vlfl~GGat~qf~~i   79 (355)
T cd00611           1 INFSAGPAALPEE-VLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAV   79 (355)
T ss_pred             CCCCCCCCCCCHH-HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
T ss_conf             9678887658999-999999997542688601551266887899999999999999848999808999578449999999


Q ss_pred             HHHCCCCCC-EEEEEECCHHHHHHHHHHHCCCCCEEEE---ECCCCCCCCHHHCCCCCC---EEEEEEECCCCEEECCEE
Q ss_conf             532057897-0799707368888876532387630674---057776578676785565---799742024202203203
Q gi|254780153|r   84 LWSLLGYRG-VDVLAWESFGLGWMSDIRQLSLQDVREF---TAPYGSLPDFSKVDFDRD---VVFVWNGTTSGVCVPDVG  156 (391)
Q Consensus        84 ~~nl~~~~~-~~~~~~g~~~~r~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~---v~~~h~ETstGv~~~~~~  156 (391)
                      ++||+.++. ..++++|.|++++++++++.+.......   ..+++..++.+.|+...+   +++|+|||++|++.+.. 
T Consensus        80 p~Nll~~~~~a~y~~tG~ws~ka~~eA~~~~~~~~i~~~~~~~~~~~iP~~~~~~~~~~~~yvh~t~NETi~Gv~~~~~-  158 (355)
T cd00611          80 PLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDEV-  158 (355)
T ss_pred             HHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEECCCC-
T ss_conf             9851478870589973726899999998746774103665667877689934327888777799932577534344656-


Q ss_pred             EECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             50256861488640110110254556857999700120017665154456778887654114457783123200112321
Q gi|254780153|r  157 FIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       157 ~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                        +...+.++|+||+|+++++|+|++++|++|+|+|||| ||+|+++|+++++++++..     ...|.+++|..+.+  
T Consensus       159 --p~~~~~~lV~D~SS~~~s~~iD~~~~d~iYagaQKnl-GpaG~tvvIir~~ll~~~~-----~~~P~~l~y~~~~~--  228 (355)
T cd00611         159 --PDTGGVPLVADMSSNILSRPIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKDLLGKAR-----KITPSMLNYKTHAD--  228 (355)
T ss_pred             --CCCCCCCEEEEECCHHCCCCCCHHHCCEEEEECCCCC-CCCCEEEEEECHHHHHHCC-----CCCCCHHHHHHHHH--
T ss_conf             --6778962787502054086767789218998710015-6665089998499971024-----46973200999985--


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                          ++|++|||||+.||.+.++++|++++||++++.+|++++++.||+|+|++..++.++.+++.||++|++|++.++.
T Consensus       229 ----~~s~~NTPp~f~iy~~~lv~~Wl~~~GGl~~~~~~n~~kA~~LY~~iD~s~~~y~~~v~~~~RS~mnv~f~~~~~~  304 (355)
T cd00611         229 ----NNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEE  304 (355)
T ss_pred             ----HCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCCEEEEEECCHH
T ss_conf             ----2555579627999999999999887689999999999999999999985888011789823358775899858878


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             011373456788899999888628287266556767505686158889999999999999
Q gi|254780153|r  317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      .       +..|++.    . +++++++++|||++| |+|||+|+++++++|++|+++++
T Consensus       305 l-------~~~Fl~~----a-~~~Gl~~lkGhRsvG-g~RaS~ynA~~~e~V~aL~~fm~  351 (355)
T cd00611         305 L-------EKEFLKE----A-EAAGMIGLKGHRSVG-GIRASIYNALSLEGVQALADFMK  351 (355)
T ss_pred             H-------HHHHHHH----H-HHCCCCCCCCCCCCC-CEEEEEECCCCHHHHHHHHHHHH
T ss_conf             8-------9999999----9-987882556875223-52788508989999999999999


No 4  
>PRK05355 phosphoserine aminotransferase; Provisional
Probab=100.00  E-value=0  Score=535.64  Aligned_cols=340  Identities=22%  Similarity=0.330  Sum_probs=292.9

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
Q ss_conf             9988868887768968999986321----------036532898899999999999999968899857999748734899
Q gi|254780153|r   11 PKRPFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAV   80 (391)
Q Consensus        11 p~~~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~   80 (391)
                      .+--||+|||+.+|++ |++.++++          +||+||||++|.+++++++++||+||++|++|+|+|+|||||+||
T Consensus         2 ~r~~NF~aGPa~LP~~-Vl~~~~~e~~~~~g~G~silEiSHRs~~f~~i~~~a~~~lr~Ll~iPd~YeVlflqGGat~qF   80 (360)
T PRK05355          2 MRVYNFSAGPAMLPEE-VLEQAQQELLDWNGSGMSVMEISHRSKEFIAVAEEAEADLRELLNIPDNYKVLFLQGGASLQF   80 (360)
T ss_pred             CCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf             9851178885438999-999999998602588860575455888899999999999999848999818999578458999


Q ss_pred             HHHHHHCCCCCC-EEEEEECCHHHHHHHHHHHCCCCCEEEEECC--CCCCCCHHHCCCCCC---EEEEEEECCCCEEECC
Q ss_conf             987532057897-0799707368888876532387630674057--776578676785565---7997420242022032
Q gi|254780153|r   81 EMALWSLLGYRG-VDVLAWESFGLGWMSDIRQLSLQDVREFTAP--YGSLPDFSKVDFDRD---VVFVWNGTTSGVCVPD  154 (391)
Q Consensus        81 ea~~~nl~~~~~-~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~---v~~~h~ETstGv~~~~  154 (391)
                      +++++||+.+++ ..++++|.|++++++++.+++...+.....+  +..+++.++|+..++   +++|+|||++|++.+.
T Consensus        81 ~~ip~Nll~~~~~a~y~~tG~Ws~KA~~EA~~~~~~~v~~~~~~~~~~~iP~~~~~~~~~~~~Y~h~t~NETi~Gv~~~~  160 (360)
T PRK05355         81 AMVPLNLLGKGGKADYVVTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTPNETIDGTEIHE  160 (360)
T ss_pred             HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCEEECC
T ss_conf             99987467889802389538889999997376168732013466777558986652779775679971477501046101


Q ss_pred             EEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             03502568614886401101102545568579997001200176651544567788876541144577831232001123
Q gi|254780153|r  155 VGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       155 ~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      .   +...+.++|+||+|+++++|+|++++|++|+|+|||| ||+|+++|+++++++++.     ....|.+++|..+.+
T Consensus       161 ~---P~~~~~pLV~DmSS~~lsrpiD~~~~d~iYagaQKNl-GpaGvtvvIvr~~ll~~~-----~~~iP~~l~y~~~~~  231 (360)
T PRK05355        161 L---PDTGDVPLVADMSSDILSRPIDVSKFGLIYAGAQKNI-GPAGLTIVIVREDLLGRA-----LPNIPSMLDYKTHAD  231 (360)
T ss_pred             C---CCCCCCCEEEECCCCCCCCCCCHHHCCEEEEECCCCC-CCCCCEEEEEEHHHHHCC-----CCCCCCHHHHHHHHH
T ss_conf             3---6668984799734543477677789157998743357-876518999759996223-----668960530999986


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                            +++++|||||+.||.+.++|+|++++||++++.+|++++++.||+++|+++++.+.+ ++++||++|++|++.+
T Consensus       232 ------~~Sl~NTPp~f~iy~~~lvl~Wl~~~GGl~~~~~~n~~KA~lLY~~iD~s~fy~~~v-~~~~RS~mNV~F~~~~  304 (360)
T PRK05355        232 ------NDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAIEKRNQEKAALLYDAIDSSDFYRNPV-APENRSRMNVPFTLAD  304 (360)
T ss_pred             ------HCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CHHHCCCCEEEEECCC
T ss_conf             ------367666884289999999999998617699999999998999999986078635889-8565686544787187


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             3101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      +.+       +..|++.     ++++++++++|||++| |+|+|+|+++++++|++|++.++ -|++
T Consensus       305 ~~l-------~~~Fl~~-----a~~~Gl~~LkGhRsvG-G~RaSlYNa~~~e~V~~L~~fm~-~F~~  357 (360)
T PRK05355        305 EEL-------DKKFLAE-----AEAAGLVGLKGHRSVG-GMRASIYNAMPLEGVQALVDFMK-EFEK  357 (360)
T ss_pred             HHH-------HHHHHHH-----HHHCCCCCCCCCCCCC-CEEEEECCCCCHHHHHHHHHHHH-HHHH
T ss_conf             778-------9999999-----9987986666876538-52788017999999999999999-9999


No 5  
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00  E-value=0  Score=533.64  Aligned_cols=343  Identities=19%  Similarity=0.151  Sum_probs=290.2

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf             88688877689689999863210365328988999999999999999688998579997487348999875320578970
Q gi|254780153|r   14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV   93 (391)
Q Consensus        14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~   93 (391)
                      ..|+|||++++|+ |+++|..++   ||||++|.+++++++++||++|++|++|++++++||||++||+++.|+++++++
T Consensus         1 lL~~PGP~~v~~~-V~~am~~~~---~HRs~~F~~i~~~~~~~L~~l~~~~~~~~v~~l~gsGt~a~Ea~~~nl~~~g~~   76 (355)
T TIGR03301         1 ILLTPGPLSTSAT-VRDAMLVDW---CHWDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGK   76 (355)
T ss_pred             CCCCCCCCCCCHH-HHHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCE
T ss_conf             9765899999999-999718777---889889999999999989999589998479999165599999999852367987


Q ss_pred             E-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--ECCCCC
Q ss_conf             7-99707368888876532387630674057776578676785-------5657997420242022032035--025686
Q gi|254780153|r   94 D-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IPESRE  163 (391)
Q Consensus        94 ~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~~~~~  163 (391)
                      + ++++|.||+||++++.+++ .+++.+..+||+.+++++++.       .+.+++||||||||+.+|+.++  ++++++
T Consensus        77 vlv~~~G~fg~r~~~~a~~~g-~~~~~~~~~~g~~~~~~~v~~~l~~~~~~~~v~~~h~ETstGv~~~~~~i~~~~~~~~  155 (355)
T TIGR03301        77 LLVLINGAYGERLAKICEYLG-IPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHG  155 (355)
T ss_pred             EEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCC
T ss_conf             999954889999999999829-9669973688778998999999725778548999501267874175376656650479


Q ss_pred             CEEEEEECCHHHHCCCCC--CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCC
Q ss_conf             148864011011025455--685799970012001766515445677888765411445778312320011232103347
Q gi|254780153|r  164 GLVICDATSAVFARHIDF--NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFC  241 (391)
Q Consensus       164 ~llivD~vSs~g~~p~d~--~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (391)
                      +++|||++||+|++|+|+  |++|+++++|||||++|||++++++|++++++....    ....|+++....++  ....
T Consensus       156 ~llvVDavSs~g~~p~d~~~~gvD~~~~~sQK~l~~ppGl~~v~~~~~~~~~~~~~----~~~~y~dl~~~~~~--~~~~  229 (355)
T TIGR03301       156 AVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGN----ARSLYLDLYDQWAY--MEKT  229 (355)
T ss_pred             CEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHCCCC----CCCCCCCHHHHHHH--HHCC
T ss_conf             64999745643568642011565899953655567888757888669999751379----87666358999988--6347


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf             86446664488999999998620103189999999977999999987479716766882003653178982473101137
Q gi|254780153|r  242 GETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLD  321 (391)
Q Consensus       242 ~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~  321 (391)
                      ++++|||||++||+++++|+||+++||++++++||+++++.+|+++++++ +.+++ ++++||+++++++++++...  +
T Consensus       230 g~~~~Tppv~~i~al~~al~~i~~eGGl~~~~~r~~~~a~~l~~~l~~lg-l~~~~-~~~~~s~~vt~~~~p~~~~~--d  305 (355)
T TIGR03301       230 GKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLL-PERWQSPIIVSFLYPDDPDF--D  305 (355)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCCEEEEECCCCCCC--C
T ss_conf             98787885499999999999999723799999999999999999999869-94358-91564986699988998885--7


Q ss_pred             HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             3456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  322 INSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       322 ~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                             .+.+.+.+.++|+.+ .+||+..+++|||||||+++++||++|+++||.++
T Consensus       306 -------~~~~~~~l~~~g~~i-~~G~~~~~~~fRig~mG~~~~~dv~~ll~~le~~L  355 (355)
T TIGR03301       306 -------FDDFYQELKERGFVI-YPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL  355 (355)
T ss_pred             -------HHHHHHHHHHCCEEE-ECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             -------999999999779078-57876779989898189999999999999999769


No 6  
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=100.00  E-value=0  Score=534.11  Aligned_cols=343  Identities=22%  Similarity=0.318  Sum_probs=294.8

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf             6899888688877689689999863210----------365328988999999999999999688998579997487348
Q gi|254780153|r    9 RKPKRPFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG   78 (391)
Q Consensus         9 ~~p~~~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~   78 (391)
                      |+++..||++||+.+ |..|++.+++.+          ||+||||++|.+++++++++||+||++|++|+|+|+|||||+
T Consensus         1 m~~~~~NF~aGPa~L-P~~Vl~~~~~e~~~~~~~G~simE~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y~VlflqGGAt~   79 (364)
T PRK12462          1 MHRNQLNFSGGPGAL-PDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAQADLRDLLGIPDEYGVVFLQGGSSL   79 (364)
T ss_pred             CCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHH
T ss_conf             996762158886448-9999999999986056897027850668888999999999999998589998279995681789


Q ss_pred             HHHHHHHHCCCCCCE--EEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCCC---CCEEEEEEECCCCEE
Q ss_conf             999875320578970--799707368888876532387630674--0577765786767855---657997420242022
Q gi|254780153|r   79 AVEMALWSLLGYRGV--DVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDFD---RDVVFVWNGTTSGVC  151 (391)
Q Consensus        79 ~~ea~~~nl~~~~~~--~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~---~~v~~~h~ETstGv~  151 (391)
                      ||+++++||+.++..  .++++|.|+.++++++.+.+...+...  ...++..|+.++|+..   ..+++|+|||++|++
T Consensus        80 qf~~ip~Nll~~~~~~a~y~~tG~WS~kA~~EA~k~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~y~h~t~NeTi~Gvq  159 (364)
T PRK12462         80 QFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAALDWDARAPFRHYVSNETVEGLQ  159 (364)
T ss_pred             HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCEE
T ss_conf             99999863756788523499627868999999997589148623566888646774322778884469862577423324


Q ss_pred             ECCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             03203502568614886401101102545568579997001200176651544567788876541144577831232001
Q gi|254780153|r  152 VPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       152 ~~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      .+..   +...+.++|+||+|+++++|+|++++|++|+|+|||| ||+|+++++++++++++...     ..|.+++|..
T Consensus       160 ~~~~---~~~~~~plV~DmSS~~lsrpiD~s~~~viYagaQKN~-G~aG~tvvIir~dll~~~~~-----~iP~~ldy~~  230 (364)
T PRK12462        160 FPDA---ADLPDSPLIADMSSDFMSRPFDVRAYGMVYAHAQKNL-GPAGVTVAIIRRALLERVPD-----TLPPMLDFRT  230 (364)
T ss_pred             ECCC---CCCCCCEEEEECCHHHHCCCCCHHHEEEEEEECCCCC-CCCCEEEEEECHHHHCCCCC-----CCCCCCCHHH
T ss_conf             1567---8999973887346065167656779038998621125-66661899987999616220-----3864021888


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             12321033478644666448899999999862010-31899999999779999999874797167668820036531789
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM-GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM  310 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~-gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~  310 (391)
                      +.+      ++|++|||||+.||.+.++++|++++ ||++++.+|++++++.||+++|++..++..+.+++.||++|++|
T Consensus       231 ~~~------~~S~yNTPp~f~Iy~~~lvl~Wl~~~~GGl~~~~~~n~~Ka~~LY~~iD~s~~fy~~~v~~~~RS~mNv~F  304 (364)
T PRK12462        231 HVE------HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAF  304 (364)
T ss_pred             HHH------HCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEE
T ss_conf             986------08878894269999999999999862135589999999999999999971878766889846588588468


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             82473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      +++++.+       +..+++.     ++++++++++|||++| |||||+|++++.++|++|++.++ -|++
T Consensus       305 ~~~~~~l-------~~~Fl~~-----a~~~Gl~~lkGhRsvG-G~RaSlYNa~~~e~V~~L~~fM~-~F~~  361 (364)
T PRK12462        305 RFRQPRL-------DTLFKEQ-----STEAGFCGLSGHRSIG-GIRASLYNAVSEQAVSRLCAFLK-DFAI  361 (364)
T ss_pred             ECCCHHH-------HHHHHHH-----HHHCCCCCCCCCCCCC-CCEEECCCCCCHHHHHHHHHHHH-HHHH
T ss_conf             1497667-------8999999-----9987986651887114-52677117999999999999999-9998


No 7  
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=100.00  E-value=0  Score=533.40  Aligned_cols=347  Identities=34%  Similarity=0.516  Sum_probs=303.4

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf             689988868887768968999986321----------0365328988999999999999999688998579997487348
Q gi|254780153|r    9 RKPKRPFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG   78 (391)
Q Consensus         9 ~~p~~~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~   78 (391)
                      .+|+.+|||+||+.+||+ ||+.++..          ++|+||||++|.++++++++++|+||++|+||+|+|+|||+|+
T Consensus         2 ~~~~~~nFsaGPa~lp~~-vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~   80 (365)
T COG1932           2 SMPRVYNFSAGPAALPPE-VLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATG   80 (365)
T ss_pred             CCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
T ss_conf             987788878885248989-9999999886341678630122133388899999999989999579987469997485378


Q ss_pred             HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCC----CCEEEEECCCCCCCCHHHCCCCC-C--EEEEEEECCCCEE
Q ss_conf             999875320578970799707368888876532387----63067405777657867678556-5--7997420242022
Q gi|254780153|r   79 AVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSL----QDVREFTAPYGSLPDFSKVDFDR-D--VVFVWNGTTSGVC  151 (391)
Q Consensus        79 ~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~-~--v~~~h~ETstGv~  151 (391)
                      ||+|+++||++++...+++.|.|+....+++.+++.    .++...+.++|.+++++.|+..+ +  |++|||||++||.
T Consensus        81 qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~ayv~~~~NeTi~Gv~  160 (365)
T COG1932          81 QFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWDFSDNDAYVHFCWNETISGVE  160 (365)
T ss_pred             HHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEE
T ss_conf             99988886421357505766214576899999864565312320002676679982214667775579993488612157


Q ss_pred             ECCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             03203502568614886401101102545568579997001200176651544567788876541144577831232001
Q gi|254780153|r  152 VPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       152 ~~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      .+..+.+..+  .++|+|++|+++++|+|+.++|++|+|+|||| ||.|++++|+||++++|.+..+    .|..|+|..
T Consensus       161 v~~~p~~~~~--~~~v~D~SS~ilsr~iDvsk~dviyagaQKnl-GpaGltvvIvr~~~l~r~~~~~----~P~if~y~~  233 (365)
T COG1932         161 VPELPDIGSD--GLLVADASSAILSRPIDVSKYDVIYAGAQKNL-GPAGLTVVIVRPDLLERAESYT----LPSIFDYLT  233 (365)
T ss_pred             CCCCCCCCCC--CEEEEECCCHHHCCCCCHHHCCEEEEEHHHCC-CCCCEEEEEECHHHHHCCCCCC----CCHHHHCHH
T ss_conf             1688988877--60899656277557777567135887621125-7655399998689970113568----961764312


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             12321033478644666448899999999862010318999999997799999998747971676688200365317898
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK  311 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~  311 (391)
                      +      ..++||+|||||+.+|.+..+++|++++||++++.+|++++++.||+++|+++++.+.+.+ +.||+||+||.
T Consensus       234 ~------~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~-~~RS~mnV~f~  306 (365)
T COG1932         234 H------ADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK-ANRSRMNVTFT  306 (365)
T ss_pred             H------HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH-HHCCCEEEEEE
T ss_conf             1------1048842784899999999999999974999999998899899999998727753344552-12153268987


Q ss_pred             ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             247310113734567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r  312 IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       312 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      +.++.           ..+.+++...++|.+. ++|||..| |+|||+|++++.+||++|+++++|+++..|
T Consensus       307 ~~~~~-----------ld~~fv~eae~~gl~~-lkGhr~vg-GmRasiynA~~~e~veaL~~fm~~f~~~~~  365 (365)
T COG1932         307 LVDAE-----------LDKGFVAEAEAAGLIY-LKGHRSVG-GLRASIYNAVPLEDVEALTDFMDWFEETYK  365 (365)
T ss_pred             CCCHH-----------HHHHHHHHHHHCCCCE-ECCCCCCC-CEEEEEECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             27377-----------7799999999737741-02664778-616654357788999999999999998609


No 8  
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00  E-value=0  Score=522.39  Aligned_cols=353  Identities=23%  Similarity=0.214  Sum_probs=302.6

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             88868887768968999986321036532898899999999999999968899857999748734899987532057897
Q gi|254780153|r   13 RPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG   92 (391)
Q Consensus        13 ~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~   92 (391)
                      +..|+|||++++|+ |+++|..++++  |||++|..++++++++|+++|++. ++.+++++||||++|||++.|++++|+
T Consensus         6 ~~Ll~PGP~~v~~~-V~~am~~~~~~--h~s~~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgd   81 (383)
T COG0075           6 RLLLTPGPVPVPPR-VLLAMARPMVG--HRSPDFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGD   81 (383)
T ss_pred             CEEEECCCCCCCHH-HHHHHCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf             52433799888999-99974577777--779889999999999999996688-874799768837999999986058998


Q ss_pred             EE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--ECCCC
Q ss_conf             07-99707368888876532387630674057776578676785-------5657997420242022032035--02568
Q gi|254780153|r   93 VD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IPESR  162 (391)
Q Consensus        93 ~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~~~~  162 (391)
                      ++ +++||.||+||++++.+++ .+++.++.+||+.+++++++.       .+.|++||||||||+.+|+.++  +++.+
T Consensus        82 kVLv~~nG~FG~R~~~ia~~~g-~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~  160 (383)
T COG0075          82 KVLVVVNGKFGERFAEIAERYG-AEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH  160 (383)
T ss_pred             EEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHC
T ss_conf             6999827807779999999829-966998478888799999999985289950899981157520137699999999972


Q ss_pred             CCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC
Q ss_conf             614886401101102545--568579997001200176651544567788876541144577831232001123210334
Q gi|254780153|r  163 EGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF  240 (391)
Q Consensus       163 ~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (391)
                      ++++|||+|||+|+.|++  .|++|++++||||||++|||++++.+|++|+++.+..+.+   ..|||+..+.+++... 
T Consensus       161 g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~~~~~~~~~~---~~ylDL~~~~~~~~~~-  236 (383)
T COG0075         161 GALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP---SFYLDLKKWLKYMEKK-  236 (383)
T ss_pred             CCEEEEEECCCCCCCCCCHHHCCCCEEEECCCHHCCCCCCCCEEEECHHHHHHHHCCCCC---CEEECHHHHHHHHHHC-
T ss_conf             988999823457881254444284589976720115898614367779999998558887---6022199999988536-


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf             78644666448899999999862010318999999997799999998747971676688200365317898247310113
Q gi|254780153|r  241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL  320 (391)
Q Consensus       241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~  320 (391)
                       ++||+||||+.+|+|+++|+.|++| |++++++||+++++.+++++++++ +..++ +++++|++++++++|++...  
T Consensus       237 -~~~p~Tppv~~i~aL~~al~~i~~E-Gle~r~~RH~~~~~a~r~~~~alG-l~~~~-~~~~~s~tvta~~~P~g~~~--  310 (383)
T COG0075         237 -GSTPYTPPVNLIYALREALDLILEE-GLEARIARHRRLAEALRAGLEALG-LELFA-DPERRSPTVTAIKVPEGVDD--  310 (383)
T ss_pred             -CCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CCCCCCCCEEEEECCCCCCC--
T ss_conf             -8988898778999999999999986-579999999999999999999769-84236-86557885489978988772--


Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             73456788899999888628287266556767505686158889999999999999999999998775
Q gi|254780153|r  321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLR  388 (391)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~  388 (391)
                          ..    .....+.+.|+.+.-+....+||.|||||||.+++.|+..++.+||.++.+....+..
T Consensus       311 ----~~----~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~~~  370 (383)
T COG0075         311 ----KK----VRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKVEA  370 (383)
T ss_pred             ----HH----HHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             ----99----9999998479996456545576189983575678899999999999999974975436


No 9  
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00  E-value=0  Score=518.79  Aligned_cols=352  Identities=19%  Similarity=0.138  Sum_probs=297.7

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             89988868887768968999986321036532898899999999999999968899857999748734899987532057
Q gi|254780153|r   10 KPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG   89 (391)
Q Consensus        10 ~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~   89 (391)
                      ++....|+|||++++|+ |+++|.+++   .||+++|.+++++++++|+++|+++++|.+++++||||++|||++.|+++
T Consensus         3 ~~~~lL~~PGPt~v~~~-V~~Am~~~~---~~~~~eF~~l~~~~~~~L~~l~~~~~~~~~v~~~gSGT~amEaai~nl~~   78 (368)
T PRK13479          3 ENDPLLLTPGPLTTSRT-TREAMLRDW---GSWDDDFNAITASVRADLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP   78 (368)
T ss_pred             CCCEEEECCCCCCCCHH-HHHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf             89805745899999999-999747577---89877899999999999999957888707999716867999999961547


Q ss_pred             CCCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--EC
Q ss_conf             89707-99707368888876532387630674057776578676785-------5657997420242022032035--02
Q gi|254780153|r   90 YRGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IP  159 (391)
Q Consensus        90 ~~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~  159 (391)
                      +|+++ ++++|.||+||++.+++++ .+++.++.+||+.+++++++.       .+.|++||||||||+.+|+.++  ++
T Consensus        79 ~gdkvLv~~~G~FG~R~~~ia~~~g-~~v~~l~~~~g~~~~~~~ve~~L~~~~~~~~v~~vH~ETSTGvln~l~~i~~~~  157 (368)
T PRK13479         79 RDGKVLVPDNGAYGARIAKIAEYLG-IAHVVLDTGEDEPPDAAAVEAALAADPRITHVALVHCETTTGILNPLDEIAAVV  157 (368)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH
T ss_conf             9997999817927999999999819-975998789999889999999997499967899985067720316799999999


Q ss_pred             CCCCCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf             568614886401101102545--568579997001200176651544567788876541144577831232001123210
Q gi|254780153|r  160 ESREGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME  237 (391)
Q Consensus       160 ~~~~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (391)
                      +++++++|||+|||+|+.|++  .|++|++++||||||++|||++++++|++++++.+.. .+   ..||++....+  .
T Consensus       158 ~~~~~lliVDaVSs~G~~~~~~d~wgiD~~~tgSQK~l~~pPGLs~v~~s~~a~~~~~~~-~~---~~yldl~~~~~--~  231 (368)
T PRK13479        158 KRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSALEACKGN-SR---SLALDLYDQWA--Y  231 (368)
T ss_pred             HHCCCEEEEECCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCC-CC---CCCCCHHHHHH--H
T ss_conf             854986999702001572110244535699953765145799710122089999987425-88---76636899999--9


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf             33478644666448899999999862010318999999997799999998747971676688200365317898247310
Q gi|254780153|r  238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI  317 (391)
Q Consensus       238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~  317 (391)
                      ....++|++||||+++|+|+++|++|++|||++++++||++.++.+++++++++ +++++ +++++|++++++..|+...
T Consensus       232 ~~~~~~~~~Tp~v~li~aL~eaL~~i~~EGgl~~r~~r~~~~~~~~~~~~~~lG-l~~~~-~~~~~s~tvtav~~P~~~~  309 (368)
T PRK13479        232 MEKTGQWRFTPPTHVVAAFYQALLQLEEEGGVPARGARYARNCRTLVAGMRALG-FEPLL-DDEIQSPIIVTFHAPADPA  309 (368)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCCEEEEECCCCCC
T ss_conf             864499886882899999999999999831889999999999999999999738-76578-9456598679997678856


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1137345678889999988862828726655676750568615888999999999999999999999
Q gi|254780153|r  318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      .         ..+.+...+.++|..+..|+ ...++.|||||||.++++||.+++.+||.+++++.+
T Consensus       310 ~---------d~~~~~~~l~~~g~~i~~G~-~~~~~~fRIGhMG~~~~~di~~~l~ale~~L~~~Gi  366 (368)
T PRK13479        310 Y---------DFKEFYERLKEQGFVIYPGK-LTQVDTFRIGCIGAVDAADIRRLVAAIAEALYWMGV  366 (368)
T ss_pred             H---------HHHHHHHHHHHCCCEEECCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             3---------59999999997793896885-577897988779999999999999999999998599


No 10 
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00  E-value=0  Score=496.83  Aligned_cols=344  Identities=22%  Similarity=0.211  Sum_probs=292.7

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf             88688877689689999863210365328988999999999999999688998579997487348999875320578970
Q gi|254780153|r   14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV   93 (391)
Q Consensus        14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~   93 (391)
                      ..|+|||++++|+ |+++|..+++  +||+++|.+++++++++|+++|+++ +|.+++++||||++||+++.|+++++++
T Consensus         1 lL~tPGP~~~~~~-V~~Am~~~~~--~hR~~~F~~~~~~~~~~L~~~~~~~-~~~~v~~~gsgt~a~ea~~~n~~~~~~k   76 (356)
T cd06451           1 LLLIPGPSNVPPR-VLKAMNRPML--GHRSPEFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLLEPGDK   76 (356)
T ss_pred             CCCCCCCCCCCHH-HHHHHCCCCC--CCCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCHHHHHHHHHHHCCCCCCC
T ss_conf             9775899988899-9998579998--8678899999999999999995899-9848999577089999999852688881


Q ss_pred             E-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC------CCCEEEEEEECCCCEEECCEEE--ECCCCCC
Q ss_conf             7-99707368888876532387630674057776578676785------5657997420242022032035--0256861
Q gi|254780153|r   94 D-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF------DRDVVFVWNGTTSGVCVPDVGF--IPESREG  164 (391)
Q Consensus        94 ~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~v~~~h~ETstGv~~~~~~~--~~~~~~~  164 (391)
                      + ++++|.||.||++++++++ .+++.++.+||+.+++++++.      .+.|++||||||||+.+|+.++  +++++++
T Consensus        77 vlv~~~G~fg~r~~~~a~~~g-~~~~~i~~~~~~~~~~~~v~~~l~~~~~~~v~~~h~etstG~~~~l~~i~~~~~~~~~  155 (356)
T cd06451          77 VLVGVNGVFGDRWADMAERYG-ADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDA  155 (356)
T ss_pred             EEEEEEEECCCCHHHHHHHCC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCE
T ss_conf             478853040541676441159-7239986899997898999988633896589996653651014775889998741572


Q ss_pred             EEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC
Q ss_conf             488640110110254556--857999700120017665154456778887654114457783123200112321033478
Q gi|254780153|r  165 LVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG  242 (391)
Q Consensus       165 llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (391)
                      +++||++||+|+.|+|++  ++|++++|+||||++|||++++++|++++++.+....  ..+.|+++..+.++  ...++
T Consensus       156 ~~~vDavss~g~~~id~~~~giD~~~~ssqK~l~~ppGl~~~~vs~~a~~~~~~~~~--~~~~y~dl~~~~~~--~~~~~  231 (356)
T cd06451         156 LLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTK--PKGFYFDLLLLLKY--WGEGY  231 (356)
T ss_pred             EEEEECCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCC--CCCCCCCHHHHHHH--HHCCC
T ss_conf             799725311055650256666059997688644589966899988999999860389--98777798999987--61489


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
Q ss_conf             64466644889999999986201031899999999779999999874797167668820036531789824731011373
Q gi|254780153|r  243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI  322 (391)
Q Consensus       243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~  322 (391)
                      ++++|||++.+++++++|+|++++ |++++++||+++++.+++++++. ++++++ +++.+|++++++++++...     
T Consensus       232 ~~~~Tp~~~~i~al~~AL~~i~~~-G~~~~~~r~~~l~~~l~~~l~~l-Gl~~~~-~~~~~S~~vt~~~~p~g~~-----  303 (356)
T cd06451         232 SYPHTPPVNLLYALREALDLILEE-GLENRWARHRRLAKALREGLEAL-GLKLLA-KPELRSPTVTAVLVPEGVD-----  303 (356)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHC-CCCCCC-CHHHCCCEEEEEECCCCCC-----
T ss_conf             878898806889999999999860-65899999999999999999975-996568-9365498279997999999-----


Q ss_pred             HHHHHHHHHHHHHH-HHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             45678889999988-86282872665567675056861588899999999999999999
Q gi|254780153|r  323 NSQKSFCKSMLSFL-EKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       323 ~~~~~~~~~~~~~l-~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                            .+.+.+.+ .+.|+.+..+.+..+++.|||||||+++.+||++++++||.+++
T Consensus       304 ------~~~~~~~l~~~~~i~i~~g~g~~~~~~fRIg~mG~~~~~di~~~l~al~~~Lk  356 (356)
T cd06451         304 ------GDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK  356 (356)
T ss_pred             ------HHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             ------99999999997899997886656895898618989999999999999999859


No 11 
>KOG2862 consensus
Probab=100.00  E-value=0  Score=447.53  Aligned_cols=358  Identities=18%  Similarity=0.170  Sum_probs=298.0

Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             64689988868887768968999986321036532898899999999999999968899857999748734899987532
Q gi|254780153|r    7 PTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus         7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n   86 (391)
                      |.-+|.+..|+|||+++ |+.|+++|..+++|  |+||+|.+||+++++++|++|++-+++. +.++|+||++||+++.|
T Consensus        12 ~m~~p~~~L~gPGPsnl-~~~V~~A~~~~~lg--h~sPe~~qIm~~v~egikyVFkT~n~~t-f~isgsGh~g~E~al~N   87 (385)
T KOG2862          12 PMYVPVRTLLGPGPSNL-SGRVQEAMSRPSLG--HMSPEFVQIMDEVLEGIKYVFKTANAQT-FVISGSGHSGWEAALVN   87 (385)
T ss_pred             CCCCCCCEEECCCCCCC-CHHHHHHHCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEEECCCCCHHHHHHHH
T ss_conf             44578301555787678-77899850677656--6787899999999987899840478962-89836984168998875


Q ss_pred             CCCCCCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC------CCCEEEEEEECCCCEEECCEE---
Q ss_conf             05789707-99707368888876532387630674057776578676785------565799742024202203203---
Q gi|254780153|r   87 LLGYRGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF------DRDVVFVWNGTTSGVCVPDVG---  156 (391)
Q Consensus        87 l~~~~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~v~~~h~ETstGv~~~~~~---  156 (391)
                      +++|||.+ ++.+|.||+||+. ++++.+.+|++++.++|+...++++..      .+.+++||+||||||.+|+.+   
T Consensus        88 ~lePgd~vLv~~~G~wg~ra~D-~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g  166 (385)
T KOG2862          88 LLEPGDNVLVVSTGTWGQRAAD-CARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISG  166 (385)
T ss_pred             HCCCCCEEEEEEECHHHHHHHH-HHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH
T ss_conf             2578974999972337778899-998608655587158556754999999987158745999834764111155788887


Q ss_pred             EECCCCCCEEEEEECCHHHHCCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             50256861488640110110254--5568579997001200176651544567788876541144577831232001123
Q gi|254780153|r  157 FIPESREGLVICDATSAVFARHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       157 ~~~~~~~~llivD~vSs~g~~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      .+|++++++++||+++|+|+.|+  |.|++|+.|++|||+|++|||++++++|++|+++....+. ++...||++..+.+
T Consensus       167 ~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~-~~~~~yFd~~~~~~  245 (385)
T KOG2862         167 ELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKT-KPVSFYFDILRLGN  245 (385)
T ss_pred             HHHHCCCEEEEEECHHHCCCCCCEEHHHCCCEEEECCHHHCCCCCCCCEEECCHHHHHHHHHCCC-CCEEEEEEHHHHCC
T ss_conf             87406781899720221478641121106507884243430799985603238889999861457-75489986776103


Q ss_pred             HHC-CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             210-3347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r  235 VME-GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV  313 (391)
Q Consensus       235 ~~~-~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~  313 (391)
                      ++- +.....+++|||+.++|.|+++|..|.+| |++++++||+++++.++..+++++ +.+|+.+++.|+++++++.++
T Consensus       246 ~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~ee-GL~~~~~rH~e~s~~l~~~l~~~G-Lq~fv~~e~~rlptvttv~vp  323 (385)
T KOG2862         246 FWGCDGEPRAYHHTPPVQLLYSLRAALALIAEE-GLENSWRRHREMSKWLKLSLEALG-LQLFVVDEELRLPTVTTVKVP  323 (385)
T ss_pred             HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-CCCEECCHHHCCCCCEEEECC
T ss_conf             205588635111688489999999999999998-789999999999999999999848-610213764526750256547


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             73101137345678889999988862-8287266556767505686158-8899999999999999999999
Q gi|254780153|r  314 DSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLGLRVWVGV-TVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       314 d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~~RIg~~g-~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      .....           ++++.+.-.. ++.++.+....+||.||||++| .-+.+.|+..++.|.-+.+..|
T Consensus       324 ~gvDw-----------~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~  384 (385)
T KOG2862         324 YGVDW-----------KDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK  384 (385)
T ss_pred             CCCCH-----------HHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             77887-----------99999998716778614667775628999875115772899999999999986416


No 12 
>KOG2790 consensus
Probab=100.00  E-value=0  Score=447.69  Aligned_cols=342  Identities=21%  Similarity=0.308  Sum_probs=293.5

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
Q ss_conf             9888688877689689999863210----------365328988999999999999999688998579997487348999
Q gi|254780153|r   12 KRPFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVE   81 (391)
Q Consensus        12 ~~~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~e   81 (391)
                      +-.||+|||+.+ |+.|+..++..+          +|+||||++|..|++++.+++|+|+++|++|+|+|||||||+||.
T Consensus         7 ~vvnFaaGPAkl-p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFa   85 (370)
T KOG2790           7 RVVNFAAGPAKL-PESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFA   85 (370)
T ss_pred             CEECCCCCCCCC-CHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf             303057883007-8899999998752667764127774145255788888889999999659975069999578746310


Q ss_pred             HHHHHCCC--CC-CEEEEEECCHHHHHHHHHHHCCCCCEEE-EE--CCCCCCCCHHHCCCC---CCEEEEEEECCCCEEE
Q ss_conf             87532057--89-7079970736888887653238763067-40--577765786767855---6579974202420220
Q gi|254780153|r   82 MALWSLLG--YR-GVDVLAWESFGLGWMSDIRQLSLQDVRE-FT--APYGSLPDFSKVDFD---RDVVFVWNGTTSGVCV  152 (391)
Q Consensus        82 a~~~nl~~--~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~-~~--~~~g~~~~~~~~~~~---~~v~~~h~ETstGv~~  152 (391)
                      |+++||.+  .| .+.++++|.|+.+.++++++++...... ..  -.+|.+|+.+.|+..   ..|.+|-|||..||..
T Consensus        86 Av~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~da~yvyyCaNETVHGVEf  165 (370)
T KOG2790          86 AVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPDASYVYYCANETVHGVEF  165 (370)
T ss_pred             HHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCEEECEEC
T ss_conf             10022210456884564886630076799987519800671365333467689835425388974799914851421113


Q ss_pred             CCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHH
Q ss_conf             32035025686148864011011025455685799970012001766515445677888765411445778312320011
Q gi|254780153|r  153 PDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKG  232 (391)
Q Consensus       153 ~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~  232 (391)
                      +..+ ....+++.+|+|++|.|.++|+|+.+++++|+|+|||+ ||+|+++++++++.+.+....     .|..++|..+
T Consensus       166 ~~~P-~~~~~~~vlVaDmSSnflSrpvDvsk~gvi~aGAQKN~-G~aG~Tvvivr~dllg~~~~~-----tP~v~dyk~~  238 (370)
T KOG2790         166 DFIP-VNDPKGAVLVADMSSNFLSRPVDVSKFGVIFAGAQKNV-GPAGVTVVIVRKDLLGNALDI-----TPSVLDYKIM  238 (370)
T ss_pred             CCCC-CCCCCCCEEEEECCCCHHCCCCCCHHCCEEEECCCCCC-CCCCCEEEEEEHHHHCCCCCC-----CCCCCCCHHH
T ss_conf             7888-77889965887633203138754012015886021255-655518999835642565558-----9620222310


Q ss_pred             HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             23210334786446664488999999998620103189999999977999999987479716766882003653178982
Q gi|254780153|r  233 GRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI  312 (391)
Q Consensus       233 ~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~  312 (391)
                            ..+++.+||||++.||+++.+++||++.||++++.+..+++++.+|+.||++.+|+..+.++..||.+|++|++
T Consensus       239 ------~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri  312 (370)
T KOG2790         239 ------DKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRI  312 (370)
T ss_pred             ------CCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCEEE
T ss_conf             ------26641015998503643366899999736699999887887789999886149868755673442101450684


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r  313 VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       313 ~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .+..+       +..|+++.    .++ ..+.++|||++| |||.|.|++++.++++.|++.++ .|++
T Consensus       313 ~~d~L-------e~eFLkeA----~~~-~mv~LKGhRSVG-GiRASlYNAisv~~~q~L~~~m~-~F~k  367 (370)
T KOG2790         313 EKDEL-------EAEFLKEA----AKE-HMVQLKGHRSVG-GIRASLYNAISVEEVQKLAAFMK-EFQK  367 (370)
T ss_pred             CCHHH-------HHHHHHHH----HHH-HCCCCCCCCCCC-CCHHHHHCCCCHHHHHHHHHHHH-HHHH
T ss_conf             63477-------89999999----984-032224654335-34356541322999999999999-9998


No 13 
>TIGR01365 serC_2 phosphoserine aminotransferase; InterPro: IPR006271   These sequences represent a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.; GO: 0009058 biosynthetic process.
Probab=100.00  E-value=0  Score=408.71  Aligned_cols=372  Identities=63%  Similarity=1.101  Sum_probs=358.2

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             89988868887768968999986321036532898899999999999999968899857999748734899987532057
Q gi|254780153|r   10 KPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG   89 (391)
Q Consensus        10 ~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~   89 (391)
                      .|.+|+|++||+..+|++..+.+....+|+|||+.--++-++++.+..|+++++|+||.+=++++|-||++|++++++++
T Consensus         1 ~P~~P~fssGPCak~PG~~~e~l~~~~lGrshr~~~Gk~~l~~ai~~tr~~l~~P~d~~~Giv~~sdtGa~em~lWs~lG   80 (379)
T TIGR01365         1 RPANPEFSSGPCAKRPGYSVEELKNAALGRSHRSKLGKEKLKEAIEKTREVLEVPADYLIGIVPASDTGAVEMALWSLLG   80 (379)
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf             98988866787667889777875200145046767659999999998789860874214666506662068988998745


Q ss_pred             CCCEEEEEECCHHHHHHHHHH-HCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEE
Q ss_conf             897079970736888887653-2387630674057776578676785565799742024202203203502568614886
Q gi|254780153|r   90 YRGVDVLAWESFGLGWMSDIR-QLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVIC  168 (391)
Q Consensus        90 ~~~~~~~~~g~~~~r~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~lliv  168 (391)
                      ...+.++++..|+..|..++. +....++..++.++|+.|++..++...++.|++|.|++||..|....++.++..+.++
T Consensus        81 ~r~v~~~~~esf~~~W~td~~kqlkl~dv~~l~a~yG~lPd~~k~d~~~d~vf~WnGttsGv~vPn~d~i~~~r~G~t~C  160 (379)
T TIGR01365        81 ARGVDLLAWESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDFKKDVVFTWNGTTSGVRVPNGDFIPADREGLTIC  160 (379)
T ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCEEEE
T ss_conf             78504788712345247777776300124432023467886201353447788874732530146643330126700420


Q ss_pred             EECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH-----HHHHHCCCCCCC
Q ss_conf             401101102545568579997001200176651544567788876541144577831232001-----123210334786
Q gi|254780153|r  169 DATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK-----GGRVMEGLFCGE  243 (391)
Q Consensus       169 D~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  243 (391)
                      |++|++.+..+|+.++|++.++.||.|||..-.+++++||+|..|++.-++.++.|..|.+..     -.+.....++|+
T Consensus       161 datsa~fa~~~~~~kldv~tfsWqk~lGGeGahG~lilsPrav~rlesy~PaWPlPk~frlt~~~~~~G~k~~~~if~G~  240 (379)
T TIGR01365       161 DATSAAFAQDLDYEKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKANKDGGGKLSKKIFEGE  240 (379)
T ss_pred             HHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCC
T ss_conf             35678887516732012455311222068875315785646787754168877723666654200123303555542465


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH
Q ss_conf             44666448899999999862010318999999997799999998747971676688200365317898247310113734
Q gi|254780153|r  244 TINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDIN  323 (391)
Q Consensus       244 ~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~  323 (391)
                      |.|||+....-....+|+|....||++.+.+|...+.+.+.+++++.....++...++.||.+.+|+.+.||.+...+.+
T Consensus       241 tintPsml~~ed~l~~l~Wa~s~GGl~~l~~r~~~n~~vl~~~v~k~~W~~~la~~~~~rs~tsvCl~~~dp~~~~~~~~  320 (379)
T TIGR01365       241 TINTPSMLCVEDYLDALKWAESIGGLKALVARADDNLAVLEAFVAKSSWVDFLAETPEIRSNTSVCLKVVDPDVAALDED  320 (379)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECHHHHHCCHH
T ss_conf             32541356577799888777630307899986666899999986334788987503001022216888616144520012


Q ss_pred             HHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             5678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r  324 SQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       324 ~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .+..+.+.++..|.+|++++++|.||+++.|+|||++.+++.+|++.|+++|||+|+.
T Consensus       321 ~~a~f~k~l~~~l~ke~~a~diG~yrdaP~GlriWCGatve~~dl~~l~~W~~Wa~~~  378 (379)
T TIGR01365       321 AQADFAKELVSLLEKEGVAYDIGSYRDAPAGLRIWCGATVEKSDLEALLPWLDWAFAL  378 (379)
T ss_pred             HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHC
T ss_conf             3679999999886321300002554447886547512421367899999999887614


No 14 
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase; InterPro: IPR012703   Phosphonates are a class of organophosphorus compounds, characterised by a stable C-P bond, which are found in a variety of biologically produced molecules including antiobiotics, lipids, proteins and polysaccharides . The functions of these molecules include phosphorus storage, cell communication, host recognition and chemical warfare. 2-Aminoethylphosphonate (AEP), the most common naturally occurring phosphonate, is an important precursor used in the biosynthesis of phosphonolipids, phosphonoproteins, and phosphonoglycans.   This entry represents 2-aminoethylphosphonate-pyruvate transaminase (AEPT)(2.6.1.37 from EC) which catalyses the interconversion of AEP and phosphonoacetaldehyde (P-Ald), coupled with the interconversion of pryuvate and L-alanine. In some bacterial species this is the first step in an AEP degradation pathway which allows them to utilise this compound as a source of carbon, nitrogen and phosphorus. Phosphonoacetaldeyhde hydrolase, often encoded by an adjacent gene, then converts P-Ald to acetaldehyde and phosphate.Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lyase complex as found in Escherichia coli.   The crystal structure of AEPT from Salmonella typhimurium has been studied to 2.2 A resolution . The protein is a homodimer where each subunit is composed of two domains, large and small. The large domain forms an alpha-beta complex characteristic of the aspartate transaminase family, while the small domain is comosed of highly twisted beta strands. The active site contains a pyridoxal 5'-phosphate cofactor and is found at the domain interface, being composed of residues from both subunits..
Probab=100.00  E-value=0  Score=398.65  Aligned_cols=344  Identities=19%  Similarity=0.153  Sum_probs=289.6

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCC-C
Q ss_conf             88688877689689999863210365328988999-999999999999688998-57999748734899987532057-8
Q gi|254780153|r   14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLG-Y   90 (391)
Q Consensus        14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~-~   90 (391)
                      ...+|||=.- -..|.++|....=   -=+.+|.+ +.+.++.+|-++....++ |+.++||||||.+.||++-+++. +
T Consensus         5 lLLTPGPLtT-s~~vk~aMl~D~C---tWD~dYn~~~~~~ir~~L~~la~~~~~~YT~VllQGSGtf~VEA~iGs~~pr~   80 (366)
T TIGR02326         5 LLLTPGPLTT-SKTVKEAMLVDWC---TWDSDYNEDVVESIRQKLLKLATAEEEKYTTVLLQGSGTFAVEAVIGSAVPRK   80 (366)
T ss_pred             CCCCCCCCCH-HHHHHHHHHCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCC
T ss_conf             5357887630-0688886621045---87155313679999999999860689854678612751255566541124788


Q ss_pred             CCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-------CCCCEEEEEEECCCCEEECCEEE--ECC
Q ss_conf             9707-9970736888887653238763067405777657867678-------55657997420242022032035--025
Q gi|254780153|r   91 RGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-------FDRDVVFVWNGTTSGVCVPDVGF--IPE  160 (391)
Q Consensus        91 ~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~v~~~h~ETstGv~~~~~~~--~~~  160 (391)
                      ++++ ++.||.||.|.++++.-+.. .....+..+...++..+++       ...+++++|+||+||++||+.++  +.+
T Consensus        81 ~~klLv~~NGAYG~R~~~ia~~l~i-~~~~~~~~E~~~~~~~~ve~~L~~dp~ItH~A~vHcETtTGiLNPi~~~~~~~~  159 (366)
T TIGR02326        81 DGKLLVVINGAYGKRIAQIAEYLQI-PHHVVETEENEPTNVVEVEAILAADPAITHVALVHCETTTGILNPIEAVAKVAK  159 (366)
T ss_pred             CCEEEEEECCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf             9738997178534789999998478-616751587777788999999851897127889836752662112899999998


Q ss_pred             CCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf             68614886401101102545568--5799970012001766515445677888765411445778312320011232103
Q gi|254780153|r  161 SREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG  238 (391)
Q Consensus       161 ~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (391)
                      .+|..+||||+||||+.|+|..+  +|.+++|++||+.|.||++||+.+...|+++..      ..++|.++.+.++..+
T Consensus       160 ~hGk~~ivDAMSSfGgi~idi~~l~~D~LIssanKCi~GVPGfgFviA~~~~L~~~~g------~arSLsLDLydQw~~M  233 (366)
T TIGR02326       160 RHGKVTIVDAMSSFGGIPIDIAELDIDYLISSANKCIQGVPGFGFVIAKQAELEKCAG------NARSLSLDLYDQWECM  233 (366)
T ss_pred             HCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC------CCCHHHHHHHHHHHHH
T ss_conf             5597799853411376001164325676352347813376843667768999986204------3210235489999996


Q ss_pred             C-CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf             3-478644666448899999999862010318999999997799999998747971676688200365317898247310
Q gi|254780153|r  239 L-FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI  317 (391)
Q Consensus       239 ~-~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~  317 (391)
                      . ..|+|+||+|||.+.|+.+||.++++|||+.+|++|++.+.+.|.+.+.+++ |..++ +++.+||.+++|..|....
T Consensus       234 ~~~~GkWRFTsPTHvV~Af~qAL~el~~EGGv~aR~~RY~~nq~~L~~~m~~LG-F~~ll-~~~~~sPIItsF~~P~~~~  311 (366)
T TIGR02326       234 EKQHGKWRFTSPTHVVHAFAQALLELEKEGGVEARYQRYQSNQKLLVAGMRALG-FEPLL-DDELQSPIITSFYSPEDPD  311 (366)
T ss_pred             HCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCEEEEEECCCCCC
T ss_conf             448996221772689999999999998458974578999999999999998615-51147-5434588689850778897


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r  318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      ..         .+++..++.+.|-++..|.= +.-..||||++|.|+.+||.+|+.+|+.+.+
T Consensus       312 y~---------F~~fY~~lk~~GFviYPGKv-s~~~~FRiG~IG~V~~~di~~l~~~I~~~~~  364 (366)
T TIGR02326       312 YR---------FADFYQRLKEQGFVIYPGKV-SQVDTFRIGNIGDVDAADIERLVTAIGKALY  364 (366)
T ss_pred             CH---------HHHHHHHHHHCCCEECCCCC-CCCCCEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             13---------89999999767817627610-4566211167676388999999999998750


No 15 
>TIGR01366 serC_3 phosphoserine aminotransferase, putative; InterPro: IPR006272   These sequences represent a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria. ; GO: 0009058 biosynthetic process.
Probab=100.00  E-value=0  Score=367.20  Aligned_cols=355  Identities=23%  Similarity=0.330  Sum_probs=316.8

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHH---HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             899888688877689689999863---21036532898899999999999999968899857999748734899987532
Q gi|254780153|r   10 KPKRPFFSSGPCAKRPGWSLGILE---GALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        10 ~p~~~~F~pGP~~~~p~~v~~~~~---~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n   86 (391)
                      +|.+..|++||++++++. ++++.   ..++|+|||.+..+.++..++++|+++|.+|+.|+|++-.||+|.-|+++...
T Consensus         1 ~P~dGrfG~GPskvr~e~-~~~~~~~~~~~~Gtshrq~~vkn~vG~~r~G~~~lf~lP~Gye~il~~GG~tafWd~a~~G   79 (362)
T TIGR01366         1 KPADGRFGAGPSKVRLEQ-LQALVATAASLLGTSHRQAPVKNLVGKVREGLAELFSLPDGYEVILGNGGATAFWDAATFG   79 (362)
T ss_pred             CCCCCCCCCCCCCCCHHH-HHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf             989886458732001888-9988721111000210201467777678887899840888607876178731456666653


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCC-CCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCE
Q ss_conf             0578970799707368888876532387-630674057776578676785565799742024202203203502568614
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSL-QDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGL  165 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~l  165 (391)
                      |++++..++ ..|.|+.++++....... .+..++..+.|..+.....+..+.+++.|||||||+..++.+.-..+.+.|
T Consensus        80 li~~~s~hl-~~Gefs~kfa~a~~~~P~~~eP~~~~~~~G~~P~~~~~~~~dv~~~~hnetstG~~~~~~r~~G~~~~~l  158 (362)
T TIGR01366        80 LIEKKSLHL-SFGEFSSKFAKAAKLAPWLDEPEIVTADPGDAPEPQAEEGVDVIAWAHNETSTGVAVPVRRPEGSDEGAL  158 (362)
T ss_pred             HHHHCCCCC-CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEE
T ss_conf             343111211-0003567887765407642487477327888853000045315675124544532677640357888407


Q ss_pred             EEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC-CCCCCHHHCCHHHHHHCCCCCCCC
Q ss_conf             8864011011025455685799970012001766515445677888765411445-778312320011232103347864
Q gi|254780153|r  166 VICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS-WPLPKIFRMVKGGRVMEGLFCGET  244 (391)
Q Consensus       166 livD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  244 (391)
                      +++|++|..|++|+|..+-|+.|++.|||+..-.|+.+.++||.|++|.+.+... ++.|.++++..   +..+..++||
T Consensus       159 v~~datsGaGGlPvdi~~~d~yyf~Pqk~fasdGGlW~~~~sPaa~~r~e~~~a~~r~~P~fl~l~~---a~~ns~knqt  235 (362)
T TIGR01366       159 VVIDATSGAGGLPVDIKETDVYYFAPQKSFASDGGLWLAVMSPAALERIEKIAASGRFVPEFLSLPT---AVDNSLKNQT  235 (362)
T ss_pred             EEEECCCCCCCCCEEECCCCEEEECCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHH---HHHHHHHCCC
T ss_conf             9997467888752000026135523542212355302315255889988876522563402433577---8765441123


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf             46664488999999998620103189999999977999999987479716766882003653178982473101137345
Q gi|254780153|r  245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINS  324 (391)
Q Consensus       245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~  324 (391)
                      +|||++..+..|.++++|+..+||++...+|....+..+|.|.+......+|+.++..||..+-++.+.|...       
T Consensus       236 yntPa~atl~ll~~q~~W~~~~GGld~~~~rt~~ss~~ly~Wa~~~~~~~P~v~d~~~rs~v~Gtidf~d~~d-------  308 (362)
T TIGR01366       236 YNTPAVATLLLLDEQVDWLNGNGGLDFAVARTKDSSSRLYSWAEEREYATPFVADPAKRSQVVGTIDFSDDID-------  308 (362)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCC-------
T ss_conf             3517999999999888886338871054565578899998776410246861005333303676640244400-------


Q ss_pred             HHHHHHHHHHHHHHCCEEECCCCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             67888999998886282872665567675-0568615888999999999999999999
Q gi|254780153|r  325 QKSFCKSMLSFLEKEEIAYDIGSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       325 ~~~~~~~~~~~l~~~g~~~~~~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                           +..+....+.|+++++.+||+.|+ ++||++++++++.||++|.+++||+..+
T Consensus       309 -----a~~~ak~lranGi~dtePyrklGrnqlr~~mfPa~~~~dv~~lt~~~d~~~~~  361 (362)
T TIGR01366       309 -----AAVVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPADVEALTECVDFVVEK  361 (362)
T ss_pred             -----HHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf             -----78999998745721365012414100124430565867899999888888616


No 16 
>TIGR01979 sufS cysteine desulfurases, SufS subfamily; InterPro: IPR010970   Cysteine desulphurases are pyridoxal-phosphate enzymes which catalyse the removal of sulphur from L-cysteine to form L-alanine and elemental sulphur. These enzymes have been shown to play an important role in the biosynthesis of iron-sulphur clusters, thionucleosides in tRNA, thiamine, biotin, lipoate and molydopterin    This entry represents a subfamily of NifS-related cysteine desulphurases that are often involved in iron-sulphur cluster formation, which is needed for nitrogen fixation and other vital functions . Many of these enzymes, in addition to cysteine desulphurase activity, also show selenocysteine lyase activity where L-selenocysteine is converted to L-alanine and selenide . Some of these enzymes are much more specific for selenocysteine than cysteine and are thus believed to function in selenium metabolism rather than sulphur metabolism.   Structural studies of the E. coli  and Synechocystis  enzymes indicate that they are homodimers which show a similar fold to other members of the alpha family of pyridoxal-phosphate enzymes .; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=100.00  E-value=5.6e-37  Score=254.35  Aligned_cols=349  Identities=17%  Similarity=0.182  Sum_probs=278.8

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCCC---CC-----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             86888776896899998632103653---28-----98899999999999999968899857999748734899987532
Q gi|254780153|r   15 FFSSGPCAKRPGWSLGILEGALLGRS---HR-----CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        15 ~F~pGP~~~~p~~v~~~~~~~~l~~s---HR-----s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n   86 (391)
                      ++=.+-|.+.|..|++++..-.=..+   ||     |.+..+.|+++|+.++++.|++.+.|++| +.|+|.+...++.+
T Consensus        22 YLDsAAT~QKP~~Vida~~~yY~~~nANVHRG~H~Ls~~AT~~YE~~R~kva~FiNA~~~~EIvF-T~gtTe~iNLvA~s  100 (409)
T TIGR01979        22 YLDSAATSQKPQAVIDAVEEYYRKSNANVHRGIHTLSVRATEAYEEAREKVAKFINAASAEEIVF-TRGTTESINLVAYS  100 (409)
T ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE-ECCCCHHHHHHHHH
T ss_conf             73485100284779999999987516700168999999999999999999998508899854787-07602788999998


Q ss_pred             C----CCC----CCEEEEEE-CCHHH--HHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCE
Q ss_conf             0----578----97079970-73688--8887653238763067405777657867678-----5565799742024202
Q gi|254780153|r   87 L----LGY----RGVDVLAW-ESFGL--GWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGV  150 (391)
Q Consensus        87 l----~~~----~~~~~~~~-g~~~~--r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv  150 (391)
                      +    +++    ||.+++.- ..-++  =| ++++++.++....+.....-..++++++     ..+.|+++|....||+
T Consensus       101 ~g~~~l~~av~pGDeIv~s~mEHHaNiVPW-Q~l~~r~GA~lk~~~l~~~G~ld~~~l~~~~~~~TKlVa~~HvSNVlGt  179 (409)
T TIGR01979       101 WGRSRLKAAVDPGDEIVISEMEHHANIVPW-QLLAERTGATLKFIPLDDDGTLDLDDLEELLTEKTKLVAITHVSNVLGT  179 (409)
T ss_pred             HCCCCCHHHCCCCCEEEECCHHHHCCHHHH-HHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHCCCEEEEEEEEECCCCC
T ss_conf             311013425389887984011100121479-9999760987899744887605188899883269829999742022030


Q ss_pred             EECCEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             2032035--02568614886401101102545568--5799970012001766515445677888765411445778312
Q gi|254780153|r  151 CVPDVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       151 ~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
                      .+|+.++  ++|.+|++++||+.+++.-+|+|+.+  ||..++|++| |.||.|+|+++.+++.||.+......+..-..
T Consensus       180 vnP~~ei~~~AH~~GA~vlvDGAQ~~pH~pvDv~~ldcDFyvFSGHK-myGPtGiGVLYGK~~lLe~MPPf~gGG~MI~~  258 (409)
T TIGR01979       180 VNPVEEIIKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHK-MYGPTGIGVLYGKEELLEEMPPFLGGGEMIEE  258 (409)
T ss_pred             CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECCH-HHCCCCCEEEHHHHHHHHHCCCCCCCCCEEEE
T ss_conf             14878999998657976998625575898988565578744561004-52576630112788988647784669861578


Q ss_pred             HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT  306 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~  306 (391)
                      -.+..-..|.+-..|.+ -.||||..+.+|..|+||+++. |++++.++-.++...+.+.|.+.++++.+=+.++..--.
T Consensus       259 V~~~~g~ty~~~P~KFE-AGTPniagviGLgaAidYl~~i-G~~~I~~~E~~L~~yal~~L~~ipg~~iyGP~~~~~R~g  336 (409)
T TIGR01979       259 VSLEEGTTYNEAPHKFE-AGTPNIAGVIGLGAAIDYLEKI-GLEKIEAHEKELTAYALERLGEIPGLRIYGPRDAEDRGG  336 (409)
T ss_pred             EEECCCCEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf             88057711367875456-8883589999999999998523-878999999999999999960189858746877432643


Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC--------CEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             1789824731011373456788899999888628287266556767--------50568615888999999999999999
Q gi|254780153|r  307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP--------LGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~--------~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      ++.|.+++-.            .+|+...|.++|++++.|.|...|        -++|+|.+=++|.||||+|+++|+-+
T Consensus       337 ~isFn~~g~H------------pHDVg~~LD~~GiAvR~GHHCAqPlm~~~~v~atcRASf~~YNT~ediD~Lv~aL~~v  404 (409)
T TIGR01979       337 IISFNVEGVH------------PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYLYNTEEDIDALVEALKKV  404 (409)
T ss_pred             EEEECCCCCC------------CCHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf             3330258887------------0022301226775686170532489865599636788741038989999999999999


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r  379 FY  380 (391)
Q Consensus       379 ~~  380 (391)
                      -+
T Consensus       405 ~~  406 (409)
T TIGR01979       405 RK  406 (409)
T ss_pred             HH
T ss_conf             98


No 17 
>pfam00266 Aminotran_5 Aminotransferase class-V. This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.
Probab=100.00  E-value=1e-35  Score=246.38  Aligned_cols=337  Identities=19%  Similarity=0.183  Sum_probs=248.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHCCC--------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf             8887768968999986321036--------5328988999999999999999688998579997487348999875320-
Q gi|254780153|r   17 SSGPCAKRPGWSLGILEGALLG--------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-   87 (391)
Q Consensus        17 ~pGP~~~~p~~v~~~~~~~~l~--------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-   87 (391)
                      .++.|+++|. |+++|...+.+        .|+++.+..++++++++.+.++++++++++|+|. +|+|.++..++.++ 
T Consensus         5 ~aattp~~~~-V~~~~~~~~~~~~~np~s~~~~~~~~~~~~~e~aR~~ia~~lga~~~~~i~ft-~~~Te~~n~~~~~~~   82 (371)
T pfam00266         5 SAATTQKPQA-VLDALQEYYTDYNGNVHRGVHHLGKEATQAYEEAREKVAEFINAPSDEEIIFT-SGTTEAINLVAISLG   82 (371)
T ss_pred             CCCCCCCCHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC-CCHHHHHHHHHHHHH
T ss_conf             8123689999-99999999986488856521499999999999999999997193998979984-887899887652345


Q ss_pred             --CCCCCEEEEEE-CCHHHHH-HHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE-
Q ss_conf             --57897079970-7368888-8765323876306740577765786767-----855657997420242022032035-
Q gi|254780153|r   88 --LGYRGVDVLAW-ESFGLGW-MSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF-  157 (391)
Q Consensus        88 --~~~~~~~~~~~-g~~~~r~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~-  157 (391)
                        +++|+.+++.. .+.+... +...++..+..+..+........+++++     +..+.|+++|..+.||+.+|+.++ 
T Consensus        83 ~~~~~gd~ii~s~~eh~s~~~~~~~l~~~~g~~v~~i~~~~~g~i~~~~l~~~i~~~t~lv~~~~v~n~tG~~~pi~~i~  162 (371)
T pfam00266        83 RRLKPGDEILVTEMEHHANLVPWQELAKRTGATVRVIPVDPNGLLDLDALEKLLTPRTKLVAITHVSNVTGTVNPVEEIG  162 (371)
T ss_pred             HCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEECHHHHHH
T ss_conf             31499899999547755236599998762495699935698986989999985689964999967667788240555699


Q ss_pred             -ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             -0256861488640110110254556--8579997001200176651544567788876541144577831232001123
Q gi|254780153|r  158 -IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       158 -~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                       +++.++++++||+++++|..|+|+.  ++|++++|++| |+||+|+|+++++++++++.......+......+......
T Consensus       163 ~~~~~~g~~~~vDa~q~~g~~~id~~~~g~D~~~~s~hK-~~GP~G~G~L~v~~~~~~~l~p~~~g~~~~~~~~~~~~~~  241 (371)
T pfam00266       163 KLAHEYGALVVVDAAQAVGHRPIDVQALGVDFLAFSGHK-LYGPTGIGVLYGRRDLLEKLPPWKGGGGMIDLVSLLQETT  241 (371)
T ss_pred             HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             998636917998751236752203232436569986555-6899843999981577845787567998435654222355


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                      +..... .--..||++..++++.++++++.+. |++++.+|..+.++.+++.+.+.++...+. ++..+.+.+++|.++.
T Consensus       242 ~~~~~~-~~e~GT~n~~~~~~l~~al~~~~~~-g~~~i~~~~~~L~~~l~~~L~~~~~~~i~~-~~~~~~~~ivsf~~~~  318 (371)
T pfam00266       242 FADAPS-KFEAGTPNIAGIIGLGAALDYLAEI-GLEAIEKHERELAAYLYERLLAIPGIRLVP-AVAERRPSIISFNFPG  318 (371)
T ss_pred             CCCCHH-HHCCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCCEEEEEECC
T ss_conf             456144-4047899878899999999999981-989999999999999999985599989949-8624668889999599


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHH
Q ss_conf             310113734567888999998886282872665567--------675056861588899999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLL  371 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L  371 (391)
                      -.            ...+...|.++|+.+..|.+..        .+..+|||...+.+.+|||+|
T Consensus       319 ~~------------~~~~~~~L~~~gI~vs~G~~Cs~~~l~~~~~~g~iRiS~~~ynT~eeId~L  371 (371)
T pfam00266       319 VH------------PHDVATLLDERGIAVRSGHHCAQPLMERLGVHGTLRASLYFYNTEEEVDRL  371 (371)
T ss_pred             CC------------HHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHCC
T ss_conf             09------------999999973488199764000324448767998899976887999998259


No 18 
>PRK09295 selenocysteine lyase; Validated
Probab=100.00  E-value=4.9e-31  Score=216.62  Aligned_cols=346  Identities=14%  Similarity=0.151  Sum_probs=242.5

Q ss_pred             CCC-CCCCCCCHHHHHHHHHHHCCC---CCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             868-887768968999986321036---53289-----889999999999999996889985799974873489998753
Q gi|254780153|r   15 FFS-SGPCAKRPGWSLGILEGALLG---RSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW   85 (391)
Q Consensus        15 ~F~-pGP~~~~p~~v~~~~~~~~l~---~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~   85 (391)
                      +|- ++=|++ |..|+++|..-+.+   ..||+     .+..+.++++++.+.+++++++..+|+| +.|+|.++..++.
T Consensus        26 YlDnaAtt~~-p~~Vi~a~~~~~~~~~~n~~~~~~~~~~~a~~~~e~aR~~iA~~lga~~~~eIvF-ts~~Tea~N~~~~  103 (406)
T PRK09295         26 YLDSAASAQK-PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQASLFINARSAEELVF-VRGTTEGINLVAN  103 (406)
T ss_pred             EECCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCHHHHHHHHH
T ss_conf             9528853789-9999999999998656988864138999999999999999999749999896999-3781699888886


Q ss_pred             HC----CCCCCEEEEEECCHHH---HHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEEC
Q ss_conf             20----5789707997073688---888765323876306740577765786767-----85565799742024202203
Q gi|254780153|r   86 SL----LGYRGVDVLAWESFGL---GWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVP  153 (391)
Q Consensus        86 nl----~~~~~~~~~~~g~~~~---r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~  153 (391)
                      .+    +++|+.+++..-.+-.   -|. ..++..+.++..+..+..-..+++++     +..+.|+++|....||+.+|
T Consensus       104 ~~~~~~~~~gd~vi~s~~EH~s~~~pw~-~l~~~~G~~v~~vp~~~~g~id~~~l~~~i~~~T~LVsv~~vsn~~G~i~p  182 (406)
T PRK09295        104 SWGNSNVRAGDNIIISEMEHHANIVPWQ-MLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENP  182 (406)
T ss_pred             HHHHHHCCCCCEEEEECCCCHHHHHHHH-HHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
T ss_conf             6688605898989994664287888999-999964962489803899848599999875379639999713678887178


Q ss_pred             CEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             2035--02568614886401101102545568--5799970012001766515445677888765411445778312320
Q gi|254780153|r  154 DVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       154 ~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
                      +.++  +++.++++++||+++++|..|+|+.+  +|++.+|++| |.||.|+|+++++++.++........+......++
T Consensus       183 v~~I~~~~~~~g~~~~vDaaQ~~g~~~idv~~l~~D~~~~S~HK-l~GP~G~G~Lyv~~~~~~~l~P~~~GG~~~~~~~~  261 (406)
T PRK09295        183 LAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSL  261 (406)
T ss_pred             HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCEEEEEHHH-CCCCCCEEEEEECHHHHHHCCCCCCCCCCEEEECC
T ss_conf             99999988755854896423466810554666315479986142-26998149999833456317863168863110034


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf             01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC  309 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~  309 (391)
                      .....+.....+. -..||++..+.++..+++++.+. |++.+.++.++..+.+++.+.+.+....+-  +..|+ .+++
T Consensus       262 ~~~~~~~~~p~rf-e~GT~n~~~i~gl~aAl~~~~~~-g~~~i~~~~~~L~~~l~~~L~~~~~v~~~g--p~~r~-~ivs  336 (406)
T PRK09295        262 TEGTTWAKAPWRF-EAGTPNTGGIIGLGAALDYVSAL-GLNNIAEYEQNLMHYALSQLEQVPDLTLYG--PQNRL-GVIA  336 (406)
T ss_pred             CCCCCCCCCCHHC-CCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCEEEEC--CCCCC-EEEE
T ss_conf             5675535652220-58887688999999999999971-889999999999999999973699989958--87755-0799


Q ss_pred             EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             98247310113734567888999998886282872665567--------6750568615888999999999999999999
Q gi|254780153|r  310 MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       310 ~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      |.+....            ..++...|.+.|+.+..|.|..        .+..+|||.+.+.+.+||++|+++|+...+-
T Consensus       337 f~~~~~~------------~~~v~~~L~~~gI~vr~G~~Ca~~~~~~~~~~~~iRvS~~~ynT~eeId~lv~aL~~I~k~  404 (406)
T PRK09295        337 FNLGKHH------------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHRL  404 (406)
T ss_pred             EECCCCC------------HHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             9738989------------9999999854998997634333044576289967999788999999999999999999997


No 19 
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00  E-value=8.9e-31  Score=214.96  Aligned_cols=355  Identities=15%  Similarity=0.167  Sum_probs=248.0

Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf             646899888688877689689999863210---3653289-----88999999999999999688998579997487348
Q gi|254780153|r    7 PTRKPKRPFFSSGPCAKRPGWSLGILEGAL---LGRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG   78 (391)
Q Consensus         7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~---l~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~   78 (391)
                      |.+.-...+|--.-+...|..|+++|..-+   -+..||+     .+..+.++++++.+.+++++++..+++| +.|+|.
T Consensus        14 P~l~~~~iYlD~Aatt~~p~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~e~aR~~iA~llga~~~~eI~f-ts~~Te   92 (401)
T PRK10874         14 PALQDAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDAKNIVW-TRGTTE   92 (401)
T ss_pred             CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHH
T ss_conf             3779994897487526899999999999998644898864108999999999999999999829699897999-796589


Q ss_pred             HHHHHHHHC----CCCCCEEEEEECCHHH---HHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEEC
Q ss_conf             999875320----5789707997073688---888765323876306740577765786767-----8556579974202
Q gi|254780153|r   79 AVEMALWSL----LGYRGVDVLAWESFGL---GWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGT  146 (391)
Q Consensus        79 ~~ea~~~nl----~~~~~~~~~~~g~~~~---r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ET  146 (391)
                      ++..++..+    +++|+.+++....+-.   -|...+++.+ ..+..+.....-.++++.+     +..+.|+++|...
T Consensus        93 ~~n~~~~~~~~~~~~~gd~vv~s~~Eh~s~~~pw~~~~~~~g-~~v~~~p~~~~g~~d~~~l~~~i~~~T~lVai~~vsn  171 (401)
T PRK10874         93 SINMVAQCYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTG-AKVVKLPLGADRLPDVDLLPELITPRSRILALGQMSN  171 (401)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCC
T ss_conf             999999999997358998388704413541589999998539-6369941588887599999998558965999979667


Q ss_pred             CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf             42022032035--0256861488640110110254556--8579997001200176651544567788876541144577
Q gi|254780153|r  147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~  222 (391)
                      .||+.+|+.++  +++.+++++++|+++++|..|+|+.  ++|++.+|++| |+||.|+|+++++++.+++.......+.
T Consensus       172 ~~G~~~pv~~I~~~~~~~g~~~~vDa~Q~~g~~~idv~~l~vD~l~~S~HK-l~GP~G~G~Lyv~~~~~~~l~P~~~Gg~  250 (401)
T PRK10874        172 VTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHK-LYGPTGIGVLYGKSELLEAMSPWLGGGK  250 (401)
T ss_pred             CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECHH-CCCCCCEEEEEECCCHHHHCCCEECCCC
T ss_conf             886557699999999764977997530137742546678439889987033-1699814999985303642786535875


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                      ......+..+. . ......--..||++..++++..+++++.+. |++++.++.+..++.+.+.+.+.+++..+-. +  
T Consensus       251 ~~~~~~~~~~~-~-~~~~~r~e~GT~n~~~i~~l~aal~~l~~~-~~~~~~~~~~~L~~~~~~~L~~~~g~~~~~~-~--  324 (401)
T PRK10874        251 MLTEVSFDGFT-P-QSAPWRLEAGTPNVAGVIGLSAALEWLADI-DIEQAESWSRSLATLAEDALAKRPGFRSFRC-Q--  324 (401)
T ss_pred             CCCCCCCCCCC-C-CCCCHHCCCCCCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C--
T ss_conf             40023467654-2-555000257783288999999999999963-9999999999999999999852899653479-9--


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             3653178982473101137345678889999988862828726655676--------75056861588899999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDW  374 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~a  374 (391)
                       ...++.|.+++-.            ..++...|.+.|+.+..|.|...        ...+|||.+.+.+.+||++|+++
T Consensus       325 -~~~i~sf~~~gi~------------~~~l~~~L~~~gi~v~~g~~ca~~~l~alg~~g~iRvS~~~ynT~~dId~li~a  391 (401)
T PRK10874        325 -DSSLLAFDFAGVH------------HSDMVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNA  391 (401)
T ss_pred             -CCCEEEEEECCCC------------HHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             -9988999879959------------999999997789789618534289999859999799965888899999999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780153|r  375 LRWVFYFQK  383 (391)
Q Consensus       375 Le~~~~~~k  383 (391)
                      |+.+.+.++
T Consensus       392 l~~~v~~lr  400 (401)
T PRK10874        392 VDRALELLV  400 (401)
T ss_pred             HHHHHHHHC
T ss_conf             999999830


No 20 
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00  E-value=1.8e-30  Score=212.97  Aligned_cols=355  Identities=15%  Similarity=0.171  Sum_probs=247.0

Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf             6468998886888776896899998632103---653289-----88999999999999999688998579997487348
Q gi|254780153|r    7 PTRKPKRPFFSSGPCAKRPGWSLGILEGALL---GRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG   78 (391)
Q Consensus         7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~   78 (391)
                      |.+.....+|--.-+...|..|+++|..-+-   +..||+     ....++++++++.+.++++.++..+|+| ++|+|.
T Consensus        11 P~l~~~~iYlDnAatt~~p~~V~~a~~~~~~~~~~n~~~s~~~~~~~~~~~~e~aR~~iA~~lga~~~~~Iif-ts~~Te   89 (398)
T TIGR03392        11 PALQDGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVW-TRGTTE   89 (398)
T ss_pred             CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHH
T ss_conf             4889990886786326898999999999998634888751439999999999999999999709599897999-587799


Q ss_pred             HHHHHHHHC----CCCCCEEEEEECCHH---HHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEEC
Q ss_conf             999875320----578970799707368---8888765323876306740577765786767-----8556579974202
Q gi|254780153|r   79 AVEMALWSL----LGYRGVDVLAWESFG---LGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGT  146 (391)
Q Consensus        79 ~~ea~~~nl----~~~~~~~~~~~g~~~---~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ET  146 (391)
                      ++..++..+    +++|+.+++....+-   .-|...+.+.+ ..+..+.......++++.+     +..+.|++.|...
T Consensus        90 ~~n~~~~~~~~~~~~~gd~ii~s~~EH~s~~~pw~~~~~~~g-~~v~~~~~~~~~~~d~~~l~~~i~~~T~lVsi~~vsn  168 (398)
T TIGR03392        90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTG-AKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSN  168 (398)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCC
T ss_conf             999898776887239989899824400342389998876448-5279961478898799999985257870899825556


Q ss_pred             CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf             42022032035--0256861488640110110254556--8579997001200176651544567788876541144577
Q gi|254780153|r  147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~  222 (391)
                      .||+.+|+.++  +++.+++++++|+++++|..|+|+.  ++|++.+|++| |+||.|+|+++++++.+++.......+.
T Consensus       169 ~~G~i~pi~~I~~~~~~~g~~~~vDa~Q~~g~~~idv~~~~~D~~~~S~hK-l~GP~G~G~Ly~~~~~~~~l~p~~~Gg~  247 (398)
T TIGR03392       169 VTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHK-LYGPTGIGVLYGKTELLEAMPPWQGGGK  247 (398)
T ss_pred             CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCEEEEEECCHHHHHCCCCCCCCC
T ss_conf             788858799999999865974786334115620334102678779986553-5699841899984114743797357997


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                      .....++..+. . +.....--..||++..++++..+++++.+. |++.+.++.....+.+.+.+.+.++...+-. +  
T Consensus       248 ~~~~~~~~~~~-~-~~~~~r~e~GT~n~~~i~gl~~al~~l~~~-~~~~~~~~~~~L~~~~~~~l~~l~g~~~~~~-~--  321 (398)
T TIGR03392       248 MLSHVSFDGFI-P-QAVPHRFEAGTPNIAGVIGLSAALEWLTDI-DIAAAEAWSVSLADLAEERLAQLPGFRSFRC-P--  321 (398)
T ss_pred             CCCCCCCCCCC-C-CCCCHHCCCCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C--
T ss_conf             34433477764-4-555021146885487899999999999964-9999999999999999999863899644579-9--


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             3653178982473101137345678889999988862828726655676--------75056861588899999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDW  374 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~a  374 (391)
                       ...++.|.+++-.            ..++...|.+.|+.+..|.|...        ...+|||.+.+.+.+||++|+++
T Consensus       322 -~~~~~~f~~~~~~------------~~~l~~~L~~~gi~v~~G~~ca~~~l~a~g~~g~iRvS~~~ynT~edId~li~a  388 (398)
T TIGR03392       322 -GSSLLAFDFAGVH------------HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDA  388 (398)
T ss_pred             -CCCEEEEEECCCC------------HHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             -9967999879939------------999999997789799668665489999868998799967888899999999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780153|r  375 LRWVFYFQK  383 (391)
Q Consensus       375 Le~~~~~~k  383 (391)
                      |+.+.+.++
T Consensus       389 L~~~l~~l~  397 (398)
T TIGR03392       389 VGAALELLN  397 (398)
T ss_pred             HHHHHHHHC
T ss_conf             999999843


No 21 
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=8.1e-31  Score=215.21  Aligned_cols=348  Identities=17%  Similarity=0.193  Sum_probs=256.1

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             886888776896899998632103---653289-----889999999999999996889985799974873489998753
Q gi|254780153|r   14 PFFSSGPCAKRPGWSLGILEGALL---GRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW   85 (391)
Q Consensus        14 ~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~   85 (391)
                      .+|-..-+...|..|++++.....   ..-||+     ....+.++++++.++++++.+...+|+| +.+.|.+...+..
T Consensus        24 vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvf-t~~tT~aln~va~  102 (405)
T COG0520          24 VYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVF-TRGTTEALNLVAR  102 (405)
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE-ECCHHHHHHHHHH
T ss_conf             763676566678899999999999740245755441279999999999999999819998772999-5983799999999


Q ss_pred             HC---CCCCCEEEEEECCHH---HHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECC
Q ss_conf             20---578970799707368---8888765323876306740577765786767-----855657997420242022032
Q gi|254780153|r   86 SL---LGYRGVDVLAWESFG---LGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPD  154 (391)
Q Consensus        86 nl---~~~~~~~~~~~g~~~---~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~  154 (391)
                      .+   +.+|+.+++..-.+-   .-| ...++..+..+..+.....-..+.+.+     +..+.|+++|....||+.+|+
T Consensus       103 ~l~~~~~~gdeIv~s~~EH~sn~~pw-~~~~~~~Ga~v~~i~~~~~g~~~~d~~~~~i~~~Tklvais~vSn~tG~~~pv  181 (405)
T COG0520         103 GLGRSLKPGDEIVVSDLEHHSNIVPW-QELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPV  181 (405)
T ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHH-HHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCH
T ss_conf             70241068998998046552008999-99998759689998418999728899986469994499996641675540409


Q ss_pred             EEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf             035--0256861488640110110254556--857999700120017665154456778887654114457783123200
Q gi|254780153|r  155 VGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV  230 (391)
Q Consensus       155 ~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~  230 (391)
                      .++  +++.++++++||++++++.+|+|+.  ++|++++|++|.|+||.|+|+++++++.++++......+....+.+..
T Consensus       182 ~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~  261 (405)
T COG0520         182 KEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRD  261 (405)
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCEEECCCC
T ss_conf             99999999849989997713347566885561898999767432579985299998665584378977788724401445


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             11232103347864466644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r  231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM  310 (391)
Q Consensus       231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~  310 (391)
                      ....+.....+ ---.||++..++++..+++++++. |++++.++.++..+.+++.+...++...+...++.| ..+++|
T Consensus       262 ~~~~~~~~p~r-fe~gTpn~~~~i~l~aAl~~~~~i-g~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r-~~~vsF  338 (405)
T COG0520         262 EGVTLAELPLR-FEAGTPNIAGAIGLAAALDYLLEI-GMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADR-GGIVSF  338 (405)
T ss_pred             CCCEECCCHHH-CCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-CCEEEE
T ss_conf             55301564153-155784378898699999999985-799999999999999999985489849964663467-746999


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             82473101137345678889999988862828726655676--------750568615888999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      .++..            ...++...|.++|+.+..+.|...        ..++|+|.+-+.+.+||++|+++|+.+
T Consensus       339 ~v~~~------------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~  402 (405)
T COG0520         339 NVKGI------------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA  402 (405)
T ss_pred             EECCC------------CHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             97895------------98999999986786998256443267875377775799974259999999999999987


No 22 
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00  E-value=6.4e-30  Score=209.54  Aligned_cols=338  Identities=14%  Similarity=0.132  Sum_probs=234.9

Q ss_pred             CCCCCCCHHHHHHHHHHHCC---CCCCC-----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-
Q ss_conf             88776896899998632103---65328-----9889999999999999996889985799974873489998753205-
Q gi|254780153|r   18 SGPCAKRPGWSLGILEGALL---GRSHR-----CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-   88 (391)
Q Consensus        18 pGP~~~~p~~v~~~~~~~~l---~~sHR-----s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-   88 (391)
                      ++=|+++|. |+++|...+.   +..||     +.+..++++++++.+.++++.++..+|+| +.|+|.++..++.++. 
T Consensus         6 aatt~~~~~-V~~~~~~~~~~~~~np~~~~~~~~~~a~~~le~aR~~ia~~lg~~~~~eI~f-ts~aTea~n~~~~~l~~   83 (373)
T cd06453           6 AATSQKPQP-VIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIF-TRNTTEAINLVAYGLGR   83 (373)
T ss_pred             CCCCCCCHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCCHHHHHHHHHHHHHH
T ss_conf             764689999-9999999999758998730509999999999999999999749699897999-18867998788653020


Q ss_pred             --CCCCEEEEEECCHHH-H-HHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE--
Q ss_conf             --789707997073688-8-88765323876306740577765786767-----855657997420242022032035--
Q gi|254780153|r   89 --GYRGVDVLAWESFGL-G-WMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF--  157 (391)
Q Consensus        89 --~~~~~~~~~~g~~~~-r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~--  157 (391)
                        ++|+.+++....+-. . -+...++..+..+..+..+..-..+++++     +..+.|++.|....||+.+|+.++  
T Consensus        84 ~~~~gd~Vi~s~~EH~s~~~p~~~la~~~G~~v~~ip~~~~G~i~~~~l~~~i~~~T~lV~~~~v~n~tG~~~pi~~I~~  163 (373)
T cd06453          84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGE  163 (373)
T ss_pred             CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHH
T ss_conf             26999989976011124278999998705958985078978858899999754589569999785667760887999999


Q ss_pred             ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             0256861488640110110254556--85799970012001766515445677888765411445778312320011232
Q gi|254780153|r  158 IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       158 ~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      +++.++++++||+++++|..|+|+.  ++|++.++++| |+||.|+|+++++++.+++.......+..........+ .+
T Consensus       164 ~~~~~g~~~~vDa~Qa~g~~~idv~~~~~D~~~~s~hK-~~GP~G~G~Lyv~~~~~~~l~p~~~gg~~~~~~~~~~~-~~  241 (373)
T cd06453         164 IAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHK-MLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET-TY  241 (373)
T ss_pred             HHHHCCCEEEEECCCCCCCCCCCHHHHHCCEEEEECHH-CCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCC-CC
T ss_conf             99874976998762124554651777627738976101-15888349999860145247833168875333234322-22


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS  315 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~  315 (391)
                      .....+. -..||++..++++.++++++.+. |++++.+|..+..+.+++.+.+.++.... .++..|+. +++|.++.-
T Consensus       242 ~~~~~rf-e~GT~n~~~i~~l~~al~~~~~~-g~~~i~~~~~~L~~~l~~~L~~l~~v~i~-~~~~~r~~-ivsf~~~~~  317 (373)
T cd06453         242 ADLPHKF-EAGTPNIAGAIGLGAAIDYLEKI-GMEAIAAHEHELTAYALERLSEIPGVRVY-GDAEDRAG-VVSFNLEGI  317 (373)
T ss_pred             CCCCCCC-CCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCCEEC-CCCCCCCC-EEEEEECCC
T ss_conf             5552202-55675588999999999999984-89999999999999999999638997624-88455688-899996995


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             10113734567888999998886282872665567--------6750568615888999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      .            ...+...|.++|+.+..|.+..        .+..+|||...+.+++|||+|+++|
T Consensus       318 ~------------~~~v~~~L~~~gI~vs~G~~Ca~~~~~~~g~~g~iRvS~~~ynt~~dId~li~al  373 (373)
T cd06453         318 H------------PHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             C------------HHHHHHHHHHCCEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf             9------------9999999967992997863324488997289987999688889999999999559


No 23 
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969   This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.97  E-value=5.7e-29  Score=203.48  Aligned_cols=335  Identities=15%  Similarity=0.166  Sum_probs=252.3

Q ss_pred             HHHHHHHHHHHC------CCCC-CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-CCC--CCCE
Q ss_conf             689999863210------3653-289-8899999999999999968899857999748734899987532-057--8970
Q gi|254780153|r   25 PGWSLGILEGAL------LGRS-HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-LLG--YRGV   93 (391)
Q Consensus        25 p~~v~~~~~~~~------l~~s-HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-l~~--~~~~   93 (391)
                      |+.|.++|..-+      .||+ ||. -+....+.|+|+.|++||++|+..+|+| +-++|.+...++.- .++  +|+.
T Consensus        13 P~ev~~a~~~~~~~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~F-t~nAT~aLN~~L~Gl~lknr~g~h   91 (384)
T TIGR01977        13 PDEVYEAMADFLKNYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVF-TNNATTALNIALKGLILKNREGDH   91 (384)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEE-ECCHHHHHHHHHHCCCCCCCCCCC
T ss_conf             3899999999987348756888750345414228899999999848897462784-060779999998433000559996


Q ss_pred             EEEEE-CCHHH-HHHHHHHHCC-CCCEEEEECCCCCCCCHHHC----CC--CCCEEEEEEECCCCEEECCEEE---ECCC
Q ss_conf             79970-73688-8887653238-76306740577765786767----85--5657997420242022032035---0256
Q gi|254780153|r   94 DVLAW-ESFGL-GWMSDIRQLS-LQDVREFTAPYGSLPDFSKV----DF--DRDVVFVWNGTTSGVCVPDVGF---IPES  161 (391)
Q Consensus        94 ~~~~~-g~~~~-r~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~~--~~~v~~~h~ETstGv~~~~~~~---~~~~  161 (391)
                      +++.. .+-+- |=...+++.. +..+.......--..+++++    +.  .+.+.+.|....||+.+|++++   +++.
T Consensus        92 Vi~t~mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~kTk~iv~~HaSNV~G~ilpiEEIgR~lA~e  171 (384)
T TIGR01977        92 VITTPMEHNSVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKNKTKLIVVSHASNVTGTILPIEEIGRELAKE  171 (384)
T ss_pred             EEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHHHH
T ss_conf             78647602366438999973599758998627888521679999853378830043220030103112578999999986


Q ss_pred             CCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf             8614886401101102545568--57999700120017665154456778887654114457783123200112321033
Q gi|254780153|r  162 REGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL  239 (391)
Q Consensus       162 ~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (391)
                      ++.++|+||++++|..|+|+++  +|++.+..+|+|.||.|.|-.+++++.-+-+..+...+--..+.++... ..+.++
T Consensus       172 ~g~~~~~DAaQtAGv~~Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~e~~~~~l~pl~~GGTGs~S~~~~~P-~~~Pdr  250 (384)
T TIGR01977       172 NGIFFILDAAQTAGVIPIDMEELAIDMLAFTGHKGLLGPQGTGGLIIKEGIKEILKPLKSGGTGSHSALIDQP-SELPDR  250 (384)
T ss_pred             CCCEEEEECCCCCCCCHHCCCHHHCCEEEECCCHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCC-CCCCCH
T ss_conf             7973998320003754101032206767637752200113631578873705674532068875453444577-604320


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf             47864466644889999999986201031899999999779999999874797167668820036531789824731011
Q gi|254780153|r  240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS  319 (391)
Q Consensus       240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~  319 (391)
                      +.-.   |-|+.+|.+|+++++|+++. |+.++.++-..+.+.+-+.|.+.....-+=+.+...-..++.|.+..=    
T Consensus       251 fE~G---TLN~pGI~gL~agik~~~~~-gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~~~~~vvSf~~~g~----  322 (384)
T TIGR01977       251 FESG---TLNTPGIAGLNAGIKFIEKI-GIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPAKRVGVVSFTVEGI----  322 (384)
T ss_pred             HCCC---CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCEEEEEECCC----
T ss_conf             1144---00379999998887887564-477899999999999987401678067627703433267589983488----


Q ss_pred             CCHHHHHHHHHHHHHHHHHCC-EEECCCCC------CCCCC----EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             373456788899999888628-28726655------67675----056861588899999999999999
Q gi|254780153|r  320 LDINSQKSFCKSMLSFLEKEE-IAYDIGSY------RDAPL----GLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       320 ~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~------r~~~~----~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                              ....+...|.++. ++++.|-|      +.+|.    .+|+|.+...++|||+.|++||++
T Consensus       323 --------d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R~S~gyFnt~ee~~~l~~al~~  383 (384)
T TIGR01977       323 --------DSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLVEALSE  383 (384)
T ss_pred             --------CHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf             --------8778999998618918976766641230353116765388727877888999999999850


No 24 
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97  E-value=4.9e-28  Score=197.55  Aligned_cols=330  Identities=14%  Similarity=0.083  Sum_probs=228.7

Q ss_pred             CCCCHHHHHHHHHHHCCCC--C----CC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC----CC
Q ss_conf             7689689999863210365--3----28-988999999999999999688998579997487348999875320----57
Q gi|254780153|r   21 CAKRPGWSLGILEGALLGR--S----HR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL----LG   89 (391)
Q Consensus        21 ~~~~p~~v~~~~~~~~l~~--s----HR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl----~~   89 (391)
                      |+++|+ |+++|...+.+.  +    |+ +....++++++++.+.++++.+.+ +|+| ++|+|.+.-.++..+    ..
T Consensus        10 tp~~~~-v~~a~~~~~~~~~~N~~s~h~~~~~a~~~~e~aR~~ia~~lga~~~-~IvF-Tsg~Tes~nlai~~~~~~~~~   86 (381)
T PRK02948         10 TPMSEE-ALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGKEQ-GVYF-TSGGTESNYLAIQSLLNALPQ   86 (381)
T ss_pred             CCCCHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CEEE-ECCHHHHHHHHHHHHHHHHCC
T ss_conf             999999-9999999998706898514179999999999999999998099978-0899-288769999999999997057


Q ss_pred             CCCEEEEEECCH-H-HHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE--ECC
Q ss_conf             897079970736-8-88887653238763067405777657867678-----55657997420242022032035--025
Q gi|254780153|r   90 YRGVDVLAWESF-G-LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF--IPE  160 (391)
Q Consensus        90 ~~~~~~~~~g~~-~-~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~--~~~  160 (391)
                      +++.+++..-.. + ..|...+++.+ ..+..+..+..-..++++++     ....|+++|....||+.+|+.++  +++
T Consensus        87 ~g~~ii~s~~EH~sv~~~~~~l~~~G-~~v~~i~~d~~G~id~~~l~~~l~~~t~LV~v~~asN~tG~i~pi~~I~~~a~  165 (381)
T PRK02948         87 NKKHIITTPMEHASIHSYFQSLESQG-YTVTEIPVDKSGLIRLVDLERAITEDTVLASIQHANSEIGTIQPIAEIGALLK  165 (381)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECEEECCCCCCCHHHHHHHHH
T ss_conf             99989974642200789999999729-98999677888876999999756899469999750206864775889999998


Q ss_pred             CCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf             6861488640110110254556--85799970012001766515445677888765411445778312320011232103
Q gi|254780153|r  161 SREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG  238 (391)
Q Consensus       161 ~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (391)
                      .++++++||++++++..|+|+.  ++|.+.+|++| |+||.|+|+++++++..     ..     |.+   .     ...
T Consensus       166 ~~g~~~~vDa~Q~~g~~~idv~~l~~D~~~fS~HK-~~GP~GiG~L~~~~~~~-----~~-----~~~---~-----g~~  226 (381)
T PRK02948        166 KYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHK-IYGPKGVGAVYINPQVR-----WK-----PVF---P-----GTS  226 (381)
T ss_pred             HHCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEHHC-CCCCCCEEEEEECCCCC-----CC-----CCC---C-----CCC
T ss_conf             70987984656614651665344677625620000-45887259999878986-----55-----566---8-----988


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf             34786446664488999999998620103189999999977999999987479716766882003653178982473101
Q gi|254780153|r  239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA  318 (391)
Q Consensus       239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~  318 (391)
                      +..+--+.||++..|.++..+++++.+  +++...++.++..+.+++.+...+.-......+..|.+.++.|.+++-.  
T Consensus       227 ~e~~~~~GT~nv~gi~~l~~A~~~~~~--~~~~~~~~~~~L~~~l~~~l~~~~~~~~~~~~~~~~~p~i~~~~~~~~~--  302 (381)
T PRK02948        227 HEKGFRPGTVNVPGIAAFLTAAENILK--NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGFE--  302 (381)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCC--
T ss_conf             789766786759999999999999986--4999999999999999999854799746568863456867887338868--


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC-------------------CEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             1373456788899999888628287266556767-------------------505686158889999999999999999
Q gi|254780153|r  319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP-------------------LGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~-------------------~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                                -..+...|.+.|+.+..|.+...+                   ..+|||.+-+.+.+|||+|+++|+...
T Consensus       303 ----------~~~~~~~l~~~gI~v~~GsaCa~~~~~~s~~l~a~g~~~~~a~~~vRvS~g~ynT~eeId~~i~al~~i~  372 (381)
T PRK02948        303 ----------GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIG  372 (381)
T ss_pred             ----------HHHHHHHCCCCCCEEECCHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             ----------8999985421681897804527898870089997599878809259997479999999999999999999


Q ss_pred             HHHHHHHHHHCC
Q ss_conf             999998775119
Q gi|254780153|r  380 YFQKISFLRAIS  391 (391)
Q Consensus       380 ~~~k~~~~~~~~  391 (391)
                      ++    |.|++|
T Consensus       373 ~~----f~r~~~  380 (381)
T PRK02948        373 NQ----FYRGVK  380 (381)
T ss_pred             HH----HHHHCC
T ss_conf             99----820216


No 25 
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97  E-value=1.2e-27  Score=195.16  Aligned_cols=328  Identities=17%  Similarity=0.133  Sum_probs=228.4

Q ss_pred             CCCCCCCHHHHHHHHHHHCCC-------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--
Q ss_conf             887768968999986321036-------53289889999999999999996889985799974873489998753205--
Q gi|254780153|r   18 SGPCAKRPGWSLGILEGALLG-------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--   88 (391)
Q Consensus        18 pGP~~~~p~~v~~~~~~~~l~-------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--   88 (391)
                      ++=|+++|+ |++++..-+..       .++.+.+..++++++++.+.++++++.+ +|+| ++|+|.++..++..+.  
T Consensus         6 AAtt~~~~~-V~~a~~~~~~~~~~np~~~h~~~~~a~~~~e~aR~~iA~~lga~~~-eIvF-t~~~T~a~n~~i~~~~~~   82 (379)
T TIGR03402         6 NATTRVDPE-VLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIF-TSGGTESDNTAIKSALAA   82 (379)
T ss_pred             CCCCCCCHH-HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEE-ECCHHHHHHHHHHHHHHH
T ss_conf             665889999-9999999999658997765899999999999999999998299967-3999-288799999999999986


Q ss_pred             -CCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEEEC-CCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE--
Q ss_conf             -789707997073688--8887653238763067405-77765786767-----855657997420242022032035--
Q gi|254780153|r   89 -GYRGVDVLAWESFGL--GWMSDIRQLSLQDVREFTA-PYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF--  157 (391)
Q Consensus        89 -~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~--  157 (391)
                       .+++.+++..-.+..  +.+..+++. +..+..+.. +.|. .+++++     +..+.|+++|....||+.+|+.++  
T Consensus        83 ~~~~d~Ii~s~~eH~a~~~~~~~l~~~-g~~v~~~~~~~~g~-id~~~l~~~l~~~T~lvs~~~~sn~tG~i~pv~~I~~  160 (379)
T TIGR03402        83 QPEKRHIITTAVEHPAVLSLCQHLEKQ-GYKVTYLPVDEEGR-LDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGE  160 (379)
T ss_pred             CCCCCEEEEECCHHHHHHHHHHHHHHC-CCEEEEEECCCCCC-CCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
T ss_conf             799999998013104566799999965-98899970378982-6426678872678628996125788870178999999


Q ss_pred             ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             0256861488640110110254556--85799970012001766515445677888765411445778312320011232
Q gi|254780153|r  158 IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       158 ~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      +++.+++++++|+++++|..|+|+.  ++|++.+|++| |+||.|+|++++++..  +   ..+.     ..-  .    
T Consensus       161 ~~~~~g~~~~vDa~Q~~g~~pidv~~~~~D~~~~S~hK-~~GP~G~G~Ly~r~~~--~---~~P~-----~~G--g----  223 (379)
T TIGR03402       161 IAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGT--R---FRPL-----LRG--G----  223 (379)
T ss_pred             HHHHCCCEEEEECCCCCCCCCCCHHHHCCCCEECCHHH-CCCCCCEEEEEECCCC--C---CCCC-----CCC--C----
T ss_conf             99763988994531124664640344157721202111-3688725999982676--6---6876-----788--8----


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             1033478644666448899999999862010318999999997799999998-747971676688200365317898247
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI-QENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i-~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                        ....+.-..||++..+.++..++++..+  +++....|.++..+.+.+.+ ...+.... ..++..|.+.++.|.++.
T Consensus       224 --~~e~~~~~GT~n~~~i~gl~~a~~~~~~--~~~~~~~~~~~l~~~l~~~ll~~~~~~~i-~g~~~~r~p~~~~~~~~~  298 (379)
T TIGR03402       224 --HQERGRRAGTENVPGIVGLGKAAELATE--HLEEENTRVRALRDRLEAGLLARIPDARL-NGDPTKRLPNTVNISFEY  298 (379)
T ss_pred             --CCCCCCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCCHHHCCCCCEEECCCC
T ss_conf             --8777767897129999999999999997--59999999999999999999850898275-478666488730323699


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC-------------------CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             3101137345678889999988862828726655676-------------------750568615888999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA-------------------PLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~-------------------~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      -.            ...+...|.++|+.+..|.+...                   ...+|||...+.+.+||++|+++|
T Consensus       299 ~~------------~~~i~~~L~~~gI~v~~G~~Ca~~~~~ps~vL~a~g~~~~~~~g~iRvS~~~ynT~edId~li~aL  366 (379)
T TIGR03402       299 IE------------GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVL  366 (379)
T ss_pred             CC------------HHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             89------------999999845189299750321599986249999759983333956999738999999999999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780153|r  376 RWVFYFQKI  384 (391)
Q Consensus       376 e~~~~~~k~  384 (391)
                      +.+.++.|+
T Consensus       367 ~~iv~~lr~  375 (379)
T TIGR03402       367 PPIIARLRA  375 (379)
T ss_pred             HHHHHHHHH
T ss_conf             999999985


No 26 
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation.
Probab=99.96  E-value=1.2e-26  Score=188.83  Aligned_cols=330  Identities=16%  Similarity=0.108  Sum_probs=234.8

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCC------CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--
Q ss_conf             8877689689999863210365------328-9889999999999999996889985799974873489998753205--
Q gi|254780153|r   18 SGPCAKRPGWSLGILEGALLGR------SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--   88 (391)
Q Consensus        18 pGP~~~~p~~v~~~~~~~~l~~------sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--   88 (391)
                      +.=|+++|+ |+++|..-+-+.      .|+ +.+..+.++++++.+.++++.++..+|+| ++|+|.+...++..+.  
T Consensus         6 aAtt~~~~~-Vi~~~~~~~~~~~~Np~s~h~~~~~a~~~~e~aR~~ia~~l~a~~~~eIvF-Tsg~Tea~N~~~~gl~~~   83 (382)
T TIGR03403         6 NATTMLDPK-VKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIII-TSCATESNNWVLKGVYFD   83 (382)
T ss_pred             CCCCCCCHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHH
T ss_conf             356899999-999999999866899632539999999999999999999759699786999-387589999999999999


Q ss_pred             ---CCC-CEEEEEECC-HH-HHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE
Q ss_conf             ---789-707997073-68-88887653238763067405777657867678-----55657997420242022032035
Q gi|254780153|r   89 ---GYR-GVDVLAWES-FG-LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF  157 (391)
Q Consensus        89 ---~~~-~~~~~~~g~-~~-~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~  157 (391)
                         .++ +.+++..-. -+ ..+...+.+.+ ..+..+..+..-..++++++     ....|+++|....||+.+|+.++
T Consensus        84 ~~~~~~~~~ii~s~~EH~sv~~~~~~l~~~G-~~v~~~~~d~~G~~d~~~l~~~l~~~T~LVai~~anN~tG~i~pv~~I  162 (382)
T TIGR03403        84 EILKGGKNHIITTEVEHPAVRATCAFLESLG-VEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEI  162 (382)
T ss_pred             HHHCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH
T ss_conf             8636899999995565153899999999659-789997759998588999997601466067763147677777879999


Q ss_pred             --ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             --0256861488640110110254556--857999700120017665154456778887654114457783123200112
Q gi|254780153|r  158 --IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       158 --~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                        +++++++++++|+++++|..|+|+.  ++|.+.+|++| |+||.|+|++++++..     ...+.     +.-.    
T Consensus       163 ~~~~~~~g~~~~vDa~Q~~g~~pidv~~l~~D~l~~S~HK-~~GP~GiG~L~ir~~~-----~l~P~-----~~Gg----  227 (382)
T TIGR03403       163 GEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHK-FHGPKGVGGLYIRKGV-----ELTPL-----FHGG----  227 (382)
T ss_pred             HHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEHHH-CCCCCCEEEEEECCCC-----CCCCC-----CCCC----
T ss_conf             9999872987996713413564643232346524531010-3688834999986777-----65876-----5898----


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             32103347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r  234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV  313 (391)
Q Consensus       234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~  313 (391)
                          ....+--..||++..+.++.++++...+  .++...++.++..+.+++.+...+....+ ..++.|.+.++.+.++
T Consensus       228 ----~~~~~~r~GT~n~~~i~~l~~A~~~~~~--~~~~~~~~~~~L~~~l~~~L~~i~~~~i~-g~~~~r~p~~~~~~~~  300 (382)
T TIGR03403       228 ----EHMGGRRSGTLNVPYIVAMGEAMRLANE--YLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIK  300 (382)
T ss_pred             ----CCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCHHHCCCCEEEEECC
T ss_conf             ----7747612798678899999999999999--89999999999999999999817794671-6833258857986279


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC-------------------CCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             73101137345678889999988862828726655676-------------------75056861588899999999999
Q gi|254780153|r  314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA-------------------PLGLRVWVGVTVEKEDLLLLCDW  374 (391)
Q Consensus       314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~-------------------~~~~RIg~~g~i~~~dv~~L~~a  374 (391)
                      .-.            ...+...|.+.|+.+..|.+...                   ...+|+|.+-+.+.+||+.++++
T Consensus       301 ~i~------------~~~~~~~L~~~gI~v~~GsaCas~~~~~s~vl~a~g~~~~~~~~~vR~S~~~ynT~eeId~~i~~  368 (382)
T TIGR03403       301 GVE------------GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEV  368 (382)
T ss_pred             CCC------------HHHHHHHHCCCCEEEECHHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             989------------89999984709979975577289988758999971998544595799975899999999999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780153|r  375 LRWVFYFQKI  384 (391)
Q Consensus       375 Le~~~~~~k~  384 (391)
                      |+.+.++.|.
T Consensus       369 l~~~v~~lr~  378 (382)
T TIGR03403       369 FKKAVQRLRA  378 (382)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999987


No 27 
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.92  E-value=7.2e-22  Score=158.37  Aligned_cols=327  Identities=19%  Similarity=0.142  Sum_probs=235.1

Q ss_pred             CCCCHHHHHHHHHHHCCCC------CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC--CC--
Q ss_conf             7689689999863210365------328-988999999999999999688998579997487348999875320--57--
Q gi|254780153|r   21 CAKRPGWSLGILEGALLGR------SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL--LG--   89 (391)
Q Consensus        21 ~~~~p~~v~~~~~~~~l~~------sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl--~~--   89 (391)
                      |++.|+ |+++|...+-..      .|+ +.+..++++++++.+.+++++.. ++++| ++|||.+...++...  ..  
T Consensus        11 Tp~~~~-v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiF-TSG~TEsnNlaI~g~~~a~~~   87 (386)
T COG1104          11 TPVDPE-VLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP-EEIIF-TSGATESNNLAIKGAALAYRN   87 (386)
T ss_pred             CCCCHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEE-ECCCCHHHHHHHHHHHHHHHC
T ss_conf             889899-999999998753189611557579999999999999999839997-80899-569847777999864876423


Q ss_pred             -CCCEEEEEE--CCHHHH-HHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----CCEEEEEEECCCCEEECCEEE--E
Q ss_conf             -897079970--736888-88765323876306740577765786767855-----657997420242022032035--0
Q gi|254780153|r   90 -YRGVDVLAW--ESFGLG-WMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----RDVVFVWNGTTSGVCVPDVGF--I  158 (391)
Q Consensus        90 -~~~~~~~~~--g~~~~r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~v~~~h~ETstGv~~~~~~~--~  158 (391)
                       ++..+++++  ..-+-. -.+.. +..+.+|+.+.....-.+++++++..     ..|.+-|...-+|+..|+.++  +
T Consensus        88 ~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~v~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i  166 (386)
T COG1104          88 AQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEI  166 (386)
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHH-HHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEEECCCCEEECCCHHHHHHH
T ss_conf             568985887554349999999999-8669757996888897287999998638884599998502682011209999999


Q ss_pred             CCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             2568614886401101102545568--57999700120017665154456778887654114457783123200112321
Q gi|254780153|r  159 PESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       159 ~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      |++++++|-+|+++++|-.|+|.+.  +|.+-+|++| |+||-|+|++++++..  +....           +     ..
T Consensus       167 ~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~--~~~p~-----------i-----~G  227 (386)
T COG1104         167 CKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGV--RLEPL-----------I-----HG  227 (386)
T ss_pred             HHHCCCEEEEEHHHHCCCEECCCCCCCCCEEEEEHHH-CCCCCCEEEEEECCCC--CCCCE-----------E-----EC
T ss_conf             9975981797613325760046021576568731121-3699842799987998--73744-----------6-----04


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             033478644666448899999999862010318999999997799999998747-9716766882003653178982473
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDS  315 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~  315 (391)
                      -.++++--..|.++..|.++.++++...++  ++....|.....+.+.+.+... +..... .++..|.+-++.+.++.-
T Consensus       228 GgQE~g~RsGTenv~~Ivg~~~A~~~a~~~--~~~~~~~~~~lr~~l~~~l~~~~p~~~~~-g~~~~rlP~~~~~~f~gv  304 (386)
T COG1104         228 GGQERGLRSGTENVPGIVGFGKAAEIAVEE--LEEENARLRKLRDRLEDGLLEIIPDVYLN-GDDEPRLPNILNFSFPGV  304 (386)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CCCCCCCCCEEEEEECCC
T ss_conf             767899788875579999999999999987--78889999999999999998509968986-885457898689996897


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC-------------------CEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             1011373456788899999888628287266556767-------------------505686158889999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP-------------------LGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~-------------------~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      ..            .-+.-.|..+|+.+..|.=++.+                   ..+|+|.+-..+++||+++++++.
T Consensus       305 ~g------------E~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~  372 (386)
T COG1104         305 EG------------ESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALK  372 (386)
T ss_pred             CH------------HHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf             57------------899986104086873364345899871499998099968837248997379998999999999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999998
Q gi|254780153|r  377 WVFYFQKIS  385 (391)
Q Consensus       377 ~~~~~~k~~  385 (391)
                      .++++.+..
T Consensus       373 ~~i~~lr~~  381 (386)
T COG1104         373 EIIKRLREL  381 (386)
T ss_pred             HHHHHHHHH
T ss_conf             999998630


No 28 
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.92  E-value=1.2e-22  Score=163.29  Aligned_cols=297  Identities=15%  Similarity=0.126  Sum_probs=206.6

Q ss_pred             CCCCHHHHHHHHHHHCCC---C----CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC----
Q ss_conf             768968999986321036---5----328-9889999999999999996889985799974873489998753205----
Q gi|254780153|r   21 CAKRPGWSLGILEGALLG---R----SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL----   88 (391)
Q Consensus        21 ~~~~p~~v~~~~~~~~l~---~----sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~----   88 (391)
                      |+++|+ |+++|...+.+   .    +|+ +.+..++++++++.+.++++...+ +++| ++|+|.++..++..+.    
T Consensus         8 tp~~~~-v~~~~~~~~~~~~~Np~s~~h~~g~~a~~~le~aR~~ia~~lga~~~-eiiF-Tsg~Tes~nl~i~g~~~~~~   84 (354)
T TIGR03235         8 TPVDPE-VAEVMLPFLLEEFGNPGSRTHEHGHNAKKAVERARKQVAEALGAQTK-EVIF-TSGATESNNIAILGLARAHE   84 (354)
T ss_pred             CCCCHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEE-ECCHHHHHHHHHHHHHHHHH
T ss_conf             989999-99999999986687973031289999999999999999998099967-7899-68837999999999998502


Q ss_pred             CCCCEEEEEECCH-HH-HHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE--EC
Q ss_conf             7897079970736-88-8887653238763067405777657867678-----55657997420242022032035--02
Q gi|254780153|r   89 GYRGVDVLAWESF-GL-GWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF--IP  159 (391)
Q Consensus        89 ~~~~~~~~~~g~~-~~-r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~--~~  159 (391)
                      .+++.+++..-.. +. ...+.+++. +..+..+..+..-..+++++.     ....|++.|....||+.+|+.++  ++
T Consensus        85 ~~g~~ii~s~~EH~svl~~~~~l~~~-G~~v~~~~vd~~G~id~~~l~~~l~~~t~lvsi~~~nnetG~i~pi~~i~~~~  163 (354)
T TIGR03235        85 NKGKHIITTAIEHPAILEPARALERN-GFTVTYLEVDESGRVSVEELADAIRDDTLLVSIMHVNNETGSLQPIREIAELC  163 (354)
T ss_pred             CCCCEEEECHHHHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf             69999998100304479999999964-96899955578982877999987268977999988756667638899998865


Q ss_pred             CCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf             56861488640110110254556--8579997001200176651544567788876541144577831232001123210
Q gi|254780153|r  160 ESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME  237 (391)
Q Consensus       160 ~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (391)
                      +.+++++++|+++++|..|+|+.  ++|.+.++++| |+||.|+|+++++++.+.+.. ..     |.++        .-
T Consensus       164 ~~~g~~~~vDa~Q~~g~~~id~~~~~~D~~s~S~HK-~~GP~GiG~L~vr~~~~~~~~-l~-----Pl~~--------GG  228 (354)
T TIGR03235       164 EAREVFFHSDAAQVVGKITVDLERDHIDLISLSGHK-AYGPKGIGALYIRKRGKPKAP-LA-----PIMF--------GG  228 (354)
T ss_pred             HCCCCEEEEECHHCCCCCCCCHHHHCCCEEEEECCC-CCCCCCEEEEEEECCCCCCCC-CC-----CEEC--------CC
T ss_conf             225641562500115875557788499737631000-348871499998046676666-46-----4036--------89


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             3347864466644889999999986201031899999999779999999874-797167668820036531789824731
Q gi|254780153|r  238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE-NDWIENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~-~~~~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                      .++++--..|+++..|.++.++++...+  +.+...++.++..+.+.+.+.. .+.... ..++..|++.++.|.+++-.
T Consensus       229 gqe~g~r~GT~nv~~i~g~~~A~~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~~v~i-~g~~~~r~p~i~s~~~~gi~  305 (354)
T TIGR03235       229 GQERGLRPGTLPVPLIVGMGEAAEIARR--NAQAWGVRLRAMCNLLRDALQTSLPGVKL-NGDPAETLPNILSFSFEGVN  305 (354)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCCCCCCCCCEEEEEECCCC
T ss_conf             8868746899659999999999999998--28999999999999999999745996596-58822475888999979969


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC
Q ss_conf             011373456788899999888628287266556767
Q gi|254780153|r  317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP  352 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~  352 (391)
                      .            ..+...| ++++.+..|.+...+
T Consensus       306 ~------------~~l~~~L-~~~iavstGSACssg  328 (354)
T TIGR03235       306 P------------EALIRNL-KADAAVSTGSACTSS  328 (354)
T ss_pred             H------------HHHHHHH-CCCCEEEHHHHCCCC
T ss_conf             9------------9999986-399899822420699


No 29 
>KOG1549 consensus
Probab=99.80  E-value=1.1e-16  Score=125.36  Aligned_cols=339  Identities=17%  Similarity=0.136  Sum_probs=201.6

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-H--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             98886888776896899998632103---653289-8--89999999999999996889985799974873489998753
Q gi|254780153|r   12 KRPFFSSGPCAKRPGWSLGILEGALL---GRSHRC-V--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW   85 (391)
Q Consensus        12 ~~~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~   85 (391)
                      -+.|.++=+ +++|. |+++|..-++   +..|+- +  +-...++++++.+.++++.... +|+| +.+||.+...++.
T Consensus        45 vyld~~at~-p~~~~-Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~-dIiF-ts~ATEs~Nlvl~  120 (428)
T KOG1549          45 VYLDNQATG-PMDPR-VLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPS-DIVF-TSGATESNNLVLK  120 (428)
T ss_pred             EEEECCCCC-CCCHH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEE-ECCCHHHHHHHHH
T ss_conf             797067678-99989-999999999985259985542023358999999999998489977-3799-4796078889998


Q ss_pred             HCCC-CC---C-EEEEEECCHH-HH-HHHHHHHCCCCCEEEEECCCCCCCCHHHCC----C-CCCEEEEEEECCCCEEEC
Q ss_conf             2057-89---7-0799707368-88-887653238763067405777657867678----5-565799742024202203
Q gi|254780153|r   86 SLLG-YR---G-VDVLAWESFG-LG-WMSDIRQLSLQDVREFTAPYGSLPDFSKVD----F-DRDVVFVWNGTTSGVCVP  153 (391)
Q Consensus        86 nl~~-~~---~-~~~~~~g~~~-~r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~-~~~v~~~h~ETstGv~~~  153 (391)
                      .+.. .+   + .++.....+. .. +.......+ .+++.+..+....++.+.+.    . ...+.+-|...-.|+.+|
T Consensus       121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g-~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P  199 (428)
T KOG1549         121 GVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEG-LEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP  199 (428)
T ss_pred             HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC-EEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCC
T ss_conf             72202456666369995045760048999998668-27999156865521189999753877439999700367421056


Q ss_pred             CEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             2035--02568614886401101102545568--5799970012001766515445677888765411445778312320
Q gi|254780153|r  154 DVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       154 ~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
                      +.++  +|..+++.+.+|+..++|..|+|+.+  +|.+.++++|.+ +|||+++++++++    ......   .|.   +
T Consensus       200 v~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~~----~~~~~~---~p~---~  268 (428)
T KOG1549         200 VKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIY-GPPGIGALYVRRK----RPRLRV---EPP---L  268 (428)
T ss_pred             HHHHHHHHCCCCCEEEEEHHHHCCCCCCCHHHCCCHHEEEECCCCC-CCCCCEEEEECCC----CCCCCC---CCC---C
T ss_conf             9999998574780798454543497441188858212464325302-7996069997468----876544---576---4


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHH-HHCCCC-CCCCCCCCCCCCC
Q ss_conf             011232103347864466644889999999986201031-8999999997799999998-747971-6766882003653
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG-LSACVERCNANAAVLFQFI-QENDWI-ENLAVDETTRSNT  306 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG-l~~~~~r~~~~a~~l~~~i-~~~~~~-~~~~~~~~~rS~~  306 (391)
                           ..-.+.++-...|+++..+.++..+++...++.+ .+++..|   ....+...+ .+.... ........+-+.+
T Consensus       269 -----~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~  340 (428)
T KOG1549         269 -----SGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLV  340 (428)
T ss_pred             -----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH---HHHHHHHHHHHHCCHHHCCCCCCCCCCCCE
T ss_conf             -----677430122057757413543688999987502125899999---999999887640735440478600046523


Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHH-HH---------HHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             178982473101137345678889-99---------99888628287266556767505686158889999999999999
Q gi|254780153|r  307 SICMKIVDSDIASLDINSQKSFCK-SM---------LSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       307 ~v~~~~~d~~~~~~~~~~~~~~~~-~~---------~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      ++-|....+.....+..  ..... +.         .-.+...|.-.+.     +-.++|||.+-+.+.+|++.|.+++.
T Consensus       341 ~~~~~~~~g~~~~~~~~--~~~l~s~~a~~~~~~epsy~l~~~G~~~~~-----~~~~iRis~G~y~t~~di~~~~~~i~  413 (428)
T KOG1549         341 SLSFPYVEGESLLMDLK--DVALSSGSACTSASLEPSYVLRAIGVDEDL-----AHSSIRISIGRYTTEEDIDYLVDAIK  413 (428)
T ss_pred             EEECCCCCCCCHHHHHH--HHHHCCCCHHHCCCCCCCHHHHHCCCCHHH-----HCCEEEEEEEEECCHHHHHHHHHHHH
T ss_conf             66025655720021010--444023305443888862116543742322-----11206986322076899999999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780153|r  377 WVFYF  381 (391)
Q Consensus       377 ~~~~~  381 (391)
                      ..-..
T Consensus       414 ~~v~~  418 (428)
T KOG1549         414 KLVSL  418 (428)
T ss_pred             HHHHH
T ss_conf             99873


No 30 
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340   This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=99.78  E-value=7.2e-16  Score=120.25  Aligned_cols=332  Identities=17%  Similarity=0.131  Sum_probs=229.0

Q ss_pred             CCC-CCCCCCCCHHHHHHHHHHHCC-------CCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC--HHHHHH
Q ss_conf             886-888776896899998632103-------653289-889999999999999996889985799974873--489998
Q gi|254780153|r   14 PFF-SSGPCAKRPGWSLGILEGALL-------GRSHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASD--TGAVEM   82 (391)
Q Consensus        14 ~~F-~pGP~~~~p~~v~~~~~~~~l-------~~sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~Gsg--T~~~ea   82 (391)
                      .+| +||=+.+ |..|++++...+.       +.+|++ ....++++++++.+..|+|+....+|+|...-.  +..|..
T Consensus        23 ~~~DnpAG~q~-Pq~V~dAv~~~L~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~G~~~T~L~~~ls~  101 (410)
T TIGR01976        23 VFFDNPAGTQI-PQSVLDAVSAALTRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVFGANATSLAYLLSR  101 (410)
T ss_pred             EEEECCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHH
T ss_conf             89757888877-73479999999874130137677663068999999999999997267988856767866899999999


Q ss_pred             HHHHCCCCCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCC-CCHHHC-----CCCCCEEEEEEECCCCEEEC
Q ss_conf             7532057897079970---73688888765323876306740577765-786767-----85565799742024202203
Q gi|254780153|r   83 ALWSLLGYRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSL-PDFSKV-----DFDRDVVFVWNGTTSGVCVP  153 (391)
Q Consensus        83 ~~~nl~~~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~-----~~~~~v~~~h~ETstGv~~~  153 (391)
                      ++....++||.+++..   ..-=.-|.+.+.+.+ ..|.....+.-+. .+.+++     +....|+++.-..++|...+
T Consensus       102 a~~~~~~~GDEvivt~LDHeaNispW~~~a~~~G-a~Vkw~~~d~~~~~L~~~~L~~Lls~rTRLVAvt~ASn~~Gs~~d  180 (410)
T TIGR01976       102 ALSRRWGPGDEVIVTRLDHEANISPWLQAAEDAG-AKVKWARVDEADGELHPDDLASLLSPRTRLVAVTAASNLLGSIVD  180 (410)
T ss_pred             HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
T ss_conf             9851268985589716766001368999998389-789996336231544869982366882255562344023255115


Q ss_pred             CEEE--ECCCCCCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             2035--02568614886401101102545--5685799970012001766515445677888765411445778312320
Q gi|254780153|r  154 DVGF--IPESREGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       154 ~~~~--~~~~~~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
                      +..+  +.|..|+.++||||......=+|  .|++|+++.|+-|.| ||+ +|+++++++.++.+..-+....      .
T Consensus       181 l~A~~~~vh~aGA~v~VDaVhyaPH~L~Dvqa~gaD~l~cSaYK~f-GPH-~G~l~~R~~~~~~l~~~k~~~~------~  252 (410)
T TIGR01976       181 LAALTELVHAAGALVYVDAVHYAPHGLIDVQALGADFLVCSAYKFF-GPH-LGILWGRPELLKSLPPYKLEFS------E  252 (410)
T ss_pred             HHHHHHHHHHCCCEEEECHHHHCCCCCCCHHHHCCCEEEECCEECC-CCC-EEEEEECHHHHCCCCCCCCCCC------C
T ss_conf             8899999987598798811100456664134227887998563116-885-0178711466404687633677------8


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----C-------------HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             01123210334786446664488999999998620103----1-------------899999999779999999874797
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG----G-------------LSACVERCNANAAVLFQFIQENDW  292 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g----G-------------l~~~~~r~~~~a~~l~~~i~~~~~  292 (391)
                          +-...+.+   ..||.--++.++..+++++.+-|    +             .+...+.-+..++.+-+.|...++
T Consensus       253 ----d~~P~r~E---~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~~~Ll~~L~~~P~  325 (410)
T TIGR01976       253 ----DTGPERFE---LGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLAERLLAGLSDLPG  325 (410)
T ss_pred             ----CCCCCEEE---ECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             ----88885145---14556026789999999999823210689886558999999999999999999999999874895


Q ss_pred             CCCCCC---C-CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-C-----CCC-----CCEEEE
Q ss_conf             167668---8-200365317898247310113734567888999998886282872665-5-----676-----750568
Q gi|254780153|r  293 IENLAV---D-ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-Y-----RDA-----PLGLRV  357 (391)
Q Consensus       293 ~~~~~~---~-~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~-----r~~-----~~~~RI  357 (391)
                      ...+-.   + .+.|-+ +++|.+.+-.            ...+++.|.++|+.+--|+ |     |..     +..+||
T Consensus       326 ~t~yG~~d~~R~~~RvP-Tv~F~v~~~~------------P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~~GvvR~  392 (410)
T TIGR01976       326 VTVYGVQDEKRLAERVP-TVAFTVAGLS------------PQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEADGGVVRV  392 (410)
T ss_pred             EEEECHHHHHHHHHCCC-EEEEEECCCC------------HHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCEEEE
T ss_conf             69973557864642597-5889727878------------7999999853686331264116899986589898873898


Q ss_pred             ECCCCCCHHHHHHHHHHH
Q ss_conf             615888999999999999
Q gi|254780153|r  358 WVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       358 g~~g~i~~~dv~~L~~aL  375 (391)
                      |+.++.+.|||+.|+++|
T Consensus       393 gLaHY~t~eevd~l~~aL  410 (410)
T TIGR01976       393 GLAHYNTAEEVDRLLEAL  410 (410)
T ss_pred             EECCCCCHHHHHHHHHCC
T ss_conf             525779889999998509


No 31 
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of  the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.74  E-value=4.7e-17  Score=127.77  Aligned_cols=154  Identities=27%  Similarity=0.260  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCC--
Q ss_conf             999999999996889985799974873489998753205789707997073688888765323876306740577765--
Q gi|254780153|r   50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSL--  127 (391)
Q Consensus        50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~--  127 (391)
                      ++++++.++++++++.+ .++| ++|||.++++++.+++++|+.+++....|+......+ ...+..+..+..+....  
T Consensus         2 ~~e~e~~la~~~~~~~~-~~i~-~~sgt~A~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~-~~~g~~~~~~~~~~~~~~~   78 (170)
T cd01494           2 LEELEEKLARLLQPGND-KAVF-VPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAA-ELAGAKPVPVPVDDAGYGG   78 (170)
T ss_pred             HHHHHHHHHHHHCCCCC-EEEE-ECHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH-HHCCCEEEEECCCCCCCCC
T ss_conf             89999999998489989-8999-5669999999999972799999982684375689999-8659877872347787554


Q ss_pred             CCHHHC------CCCCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCC-----CCCCCCEEEEECCHHC
Q ss_conf             786767------855657997420242022032035--025686148864011011025-----4556857999700120
Q gi|254780153|r  128 PDFSKV------DFDRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARH-----IDFNKLDVVTFSAQKV  194 (391)
Q Consensus       128 ~~~~~~------~~~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p-----~d~~~iDv~~a~sQK~  194 (391)
                      .+....      +..+.++++|.++++|+..|..++  +|+++++++++|+++++|+.+     .+.+++|++.+++||+
T Consensus        79 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~l~~I~~la~~~gi~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~hK~  158 (170)
T cd01494          79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN  158 (170)
T ss_pred             CCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf             68999999855999636887740147873201999973562079699994684321606666677778985999898666


Q ss_pred             CCCCCCCEEEEEC
Q ss_conf             0176651544567
Q gi|254780153|r  195 LGGEAGFGIIILS  207 (391)
Q Consensus       195 l~~ppGl~~v~~s  207 (391)
                      |+ |||.|+++++
T Consensus       159 lg-~~g~g~l~~~  170 (170)
T cd01494         159 LG-GEGGGVVIVK  170 (170)
T ss_pred             CC-CCCEEEEEEC
T ss_conf             78-9857999989


No 32 
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.64  E-value=8.5e-13  Score=100.73  Aligned_cols=303  Identities=17%  Similarity=0.099  Sum_probs=188.3

Q ss_pred             CHHHHHHHHHHHCC--CCC---CCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             96899998632103--653---2898-89999999999999996889985799974873489998753205789707997
Q gi|254780153|r   24 RPGWSLGILEGALL--GRS---HRCV-LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l--~~s---HRs~-~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      +|+ +.++..+.+-  |.+   .|.- --.+++.++.+.|.++++.++   ++++ .||+.+.-+++..+.++++.++..
T Consensus        17 ~p~-~~~a~~~a~~~~G~g~~~sr~~~G~~~~~~~lE~~la~~~g~e~---al~~-~sG~~an~~~i~~l~~~~d~i~~D   91 (349)
T cd06454          17 HPE-VIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA---ALVF-SSGYAANDGVLSTLAGKGDLIISD   91 (349)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE---EEEE-CCHHHHHHHHHHHCCCCCCEEEEC
T ss_conf             999-99999999997399888767364787999999999999869981---9995-570787788886205789779741


Q ss_pred             ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-C----CCCCEEEEEEE---CCCCEEECCEEE--ECCCCCCEEE
Q ss_conf             073688888765323876306740577765786767-8----55657997420---242022032035--0256861488
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-D----FDRDVVFVWNG---TTSGVCVPDVGF--IPESREGLVI  167 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~----~~~~v~~~h~E---TstGv~~~~~~~--~~~~~~~lli  167 (391)
                      ......  ..+..+..+..+..  .+.....++++. +    ..... ++-.|   +..|-..|..++  +++++++.++
T Consensus        92 ~~~H~s--i~~G~~~s~a~~~~--f~Hnd~~~L~~~l~~~~~~~~~~-~iv~egv~Sm~Gd~apL~~l~~l~~~~~~~li  166 (349)
T cd06454          92 SLNHAS--IIDGIRLSGAKKRI--FKHNDMEDLEKLLREARRPYGKK-LIVTEGVYSMDGDIAPLPELVDLAKKYGAILF  166 (349)
T ss_pred             CCCCHH--HHHHHHCCCCCEEE--ECCCCHHHHHHHHHHHHCCCCCE-EEEECCCCCCCCCCCCHHHHHHHHHHHCCEEE
T ss_conf             534372--88636524464799--78999999999998532258976-99965767888776798999999998297899


Q ss_pred             EEECCHHHHC--------C--CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf             6401101102--------5--45568579997001200176651544567788876541144577831232001123210
Q gi|254780153|r  168 CDATSAVFAR--------H--IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME  237 (391)
Q Consensus       168 vD~vSs~g~~--------p--~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (391)
                      ||-.-++|..        .  ....++|++.++-.|+||+..|  ++..+++..+.......+    .            
T Consensus       167 vDeAH~~Gv~G~~G~G~~~~~~~~~~~di~~~tlsKa~G~~Gg--~v~g~~~~i~~l~~~~~~----~------------  228 (349)
T cd06454         167 VDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVGG--YIAGSKELIDYLRSYARG----F------------  228 (349)
T ss_pred             EECHHHCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCC--EEECCHHHHHHHHHHCCC----C------------
T ss_conf             7232331741588876788658988667998536543467771--242535689999861988----5------------


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf             33478644666448899999999862010318999999997799999998747971676688200365317898247310
Q gi|254780153|r  238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI  317 (391)
Q Consensus       238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~  317 (391)
                         -.++  ++|...+.+...+|+.+.+   -..+.++-+++.+.+++.+.+.+ +.. .  .. .+..++.+...++  
T Consensus       229 ---i~s~--~l~p~~~aa~~~al~~l~~---~~~~~~~L~~~~~~~~~~l~~~g-~~i-~--~~-~~~~i~~~~~~~~--  293 (349)
T cd06454         229 ---IFST--SLPPAVAAAALAALEVLQG---GPERRERLQENVRYLRRGLKELG-FPV-G--GS-PSHIIPPLIGDDP--  293 (349)
T ss_pred             ---CCCC--CCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHCC-CCC-C--CC-CCCCEEEEECCCH--
T ss_conf             ---7777--7689999999999999863---95889999999999999999769-975-7--99-9972799986999--


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             1137345678889999988862828726655676750---568615888999999999999999
Q gi|254780153|r  318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                               .....+...|.++|+.+..-.|..++++   +||......+++||+.|+++|+.+
T Consensus       294 ---------~~a~~~~~~L~~~Gi~v~~~~~Ptvp~~~~~lRi~~sa~ht~edId~li~~l~ev  348 (349)
T cd06454         294 ---------AKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             ---------HHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             ---------9999999999887962863798978999835999868779999999999999974


No 33 
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.60  E-value=1.4e-11  Score=93.02  Aligned_cols=306  Identities=14%  Similarity=0.046  Sum_probs=193.7

Q ss_pred             CCHHHHHHHHHHHC--CCCCCCCHH----HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE
Q ss_conf             89689999863210--365328988----999999999999999688998579997487348999875320578970799
Q gi|254780153|r   23 KRPGWSLGILEGAL--LGRSHRCVL----GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL   96 (391)
Q Consensus        23 ~~p~~v~~~~~~~~--l~~sHRs~~----f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~   96 (391)
                      .+|+ +.++....+  .|.+.-++.    ...++.++.+.|.++++.++   ++++ .||..+.-+++..|.++++.++.
T Consensus        54 ~hp~-v~~a~~~a~~~yG~g~~~SRl~~G~~~~h~~LE~~lA~~~g~e~---allf-~SGy~An~~~i~al~~~~d~ii~  128 (387)
T PRK05958         54 NHPE-LIAAAQQAARRYGVGSGGSRLVTGNSPAHEALEAELAEWFGAER---ALLF-SSGYAANLAVLTALVGKGDLIVS  128 (387)
T ss_pred             CCHH-HHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCC---EEEE-CCCHHHHHHHHHHCCCCCCEEEE
T ss_conf             9999-99999999998389886563230686999999999999868996---7964-55238666566532789978997


Q ss_pred             EE-CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCC-CCEEEEEEECC---CCEEECCEE--EECCCCCCEEEE
Q ss_conf             70-73688888765323876306740577765786767-855-65799742024---202203203--502568614886
Q gi|254780153|r   97 AW-ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFD-RDVVFVWNGTT---SGVCVPDVG--FIPESREGLVIC  168 (391)
Q Consensus        97 ~~-g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~v~~~h~ETs---tGv~~~~~~--~~~~~~~~lliv  168 (391)
                      .- .+++-   .+..+..+..+.  ........+++.. +.. ..-.++-.|+.   .|-..|..+  .+++.+++.++|
T Consensus       129 D~~~HaSi---~dG~~ls~a~~~--~f~HnD~~~Le~~L~~~~~~~~~iv~egvySMdGd~apL~~i~~L~~~y~~~L~v  203 (387)
T PRK05958        129 DKLNHASL---IDGARLSRAEVR--RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLV  203 (387)
T ss_pred             ECCCCHHH---HHHHHHCCCCEE--EECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEE
T ss_conf             10046989---998872799289--9689999999999973889875999746657788766899999999970847884


Q ss_pred             EECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf             401101102---------545-5685799970012001766515445677888765411445778312320011232103
Q gi|254780153|r  169 DATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG  238 (391)
Q Consensus       169 D~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (391)
                      |-.=++|..         .++ ..++|++.++-.|+||+..|  +|+.|++.++...... +.+                
T Consensus       204 DeAH~~Gv~G~~G~G~~e~~~~~~~vdi~~gTlsKA~gs~GG--~i~g~~~~i~~l~~~a-~~~----------------  264 (387)
T PRK05958        204 DEAHGTGVLGPQGRGLAEAAGLAGEIVILVGTLGKALGSSGA--AVLGSETLIDYLINRA-RPF----------------  264 (387)
T ss_pred             CCHHHCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCE--EEEECHHHHHHHHHHC-CCC----------------
T ss_conf             262222633799984899847888868997605444567743--9950789999998739-020----------------


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf             34786446664488999999998620103189999999977999999987479716766882003653178982473101
Q gi|254780153|r  239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA  318 (391)
Q Consensus       239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~  318 (391)
                        -.++  .+|-..+.+...+|+.+.++   +.+.++-+++.+.+++.+...++ ..    ....|+ ++++.+.++.  
T Consensus       265 --ifSt--alpP~~~aa~~~al~~i~~~---~~~~~~L~~n~~~~~~~l~~~g~-~~----~~s~sp-Iipi~ig~~~--  329 (387)
T PRK05958        265 --IFTT--ALPPAQAAAARAALRILREE---PERRERLAALIARLRAGLRALGL-GL----PDSESA-IQPLIVGDNE--  329 (387)
T ss_pred             --CCCC--CCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC----CCCCCC-EEEEEECCHH--
T ss_conf             --3158--88779999999999998609---59999999999999864575399-85----899998-7999969999--


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             137345678889999988862828726655676750---568615888999999999999999999
Q gi|254780153|r  319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                               ....+.+.|.++|+.+..-.|+.++++   +||......+++||+.|+++|+++..+
T Consensus       330 ---------~~~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~i~a~ht~~dId~l~~~l~e~~~~  386 (387)
T PRK05958        330 ---------RALALAAALQAQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEALAA  386 (387)
T ss_pred             ---------HHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             ---------999999999977952831789988999844999978779999999999999999950


No 34 
>PRK10534 L-threonine aldolase; Provisional
Probab=99.53  E-value=2e-11  Score=91.98  Aligned_cols=299  Identities=16%  Similarity=0.149  Sum_probs=178.1

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             88776896899998632103653289889999999999999996889985799974873489998753205789707997
Q gi|254780153|r   18 SGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        18 pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      .+||   |+ ++++|..+-.|  +-..-=....++..+.+.++|+.+.   .+|++ |||.+.-.+++.+..+++.+++.
T Consensus        10 t~p~---~~-m~~Am~~A~~G--ddvYgeDptv~~Le~~~A~l~G~ea---alFvp-sGTmaN~iAl~~~~~~g~~vi~~   79 (333)
T PRK10534         10 TRPS---RA-MLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSGKEA---ALFLP-TGTQANLVALLSHCERGEEYIVG   79 (333)
T ss_pred             CCCC---HH-HHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCE---EEEEC-CCCHHHHHHHHHHCCCCCEEEEC
T ss_conf             9999---99-99999737557--7545769899999999999858971---89957-87578999999847899869875


Q ss_pred             ECCHHH-HHHHHHHHCCCCCEEEEEC-CCCCCCCHHHCC----C------CCCEEEEEEECCCCEEECCEEE-----ECC
Q ss_conf             073688-8887653238763067405-777657867678----5------5657997420242022032035-----025
Q gi|254780153|r   98 WESFGL-GWMSDIRQLSLQDVREFTA-PYGSLPDFSKVD----F------DRDVVFVWNGTTSGVCVPDVGF-----IPE  160 (391)
Q Consensus        98 ~g~~~~-r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~----~------~~~v~~~h~ETstGv~~~~~~~-----~~~  160 (391)
                      ....-. .-..-.+..++.....+.. ..|.. +++++.    .      ...+....| |..|..+|..++     .|+
T Consensus        80 ~~sHI~~~E~Gg~a~l~g~~~~~i~~~~~g~~-~~~~v~~~i~~~~~h~~~~~lv~len-T~~G~v~p~~el~~i~~~a~  157 (333)
T PRK10534         80 QAAHNYLYEAGGAAVLGSIQPQPIDAAADGTL-PLDKVAAKIKPDDIHFARTRLLSLEN-THNGKVLPREYLKEAWEFTR  157 (333)
T ss_pred             CCCCCHHCCCCCHHHHCCCCEEEECCCCCCCC-CHHHHHHHCCCCCCCCCCEEEEEEEE-CCCCEECCHHHHHHHHHHHH
T ss_conf             77761011466489876952155147889824-89999986187887667624665540-35885368999999999999


Q ss_pred             CCCCEEEEEEC------CHHHHCCCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             68614886401------1011025455-6857999700120017665154456778887654114457783123200112
Q gi|254780153|r  161 SREGLVICDAT------SAVFARHIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       161 ~~~~llivD~v------Ss~g~~p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                      .++..+-.|+-      .+.|.-|-++ +.+|.++.+--|+||+|-| ++++.+++.+++........            
T Consensus       158 ~~gl~vHlDGARl~NA~~a~g~~~~e~~~~~Dsvs~clsKgLGap~G-svl~g~~~~i~~a~~~RK~~------------  224 (333)
T PRK10534        158 ERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVG-SLLVGNRDYIKRAIRWRKMT------------  224 (333)
T ss_pred             HCCCEEEECHHHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCCCC-EEEECCHHHHHHHHHHHHHH------------
T ss_conf             75983762327776446542999999997589889874067887332-14646899999999999985------------


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             32103347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r  234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV  313 (391)
Q Consensus       234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~  313 (391)
                             -|.+..   . .+.+ ...+. .+++ .++...+.|+ +++.+.+.+...+ ....  .+    -+|+.|...
T Consensus       225 -------GGgmrQ---~-g~lA-Aa~l~-aL~~-~~~rl~~dH~-nA~~La~~L~~~g-~~~~--~~----eTN~vf~~~  282 (333)
T PRK10534        225 -------GGGMRQ---A-GILA-AAGLY-ALKH-NVARLQEDHD-NAAWLAQQLREAG-ADVM--RQ----DTNMLFVRV  282 (333)
T ss_pred             -------CCHHHH---H-HHHH-HHHHH-HHHC-CHHHHHHHHH-HHHHHHHHHHHCC-CCCC--CC----CCCEEEEEC
T ss_conf             -------465558---9-9999-99999-9963-9998999999-8999999999769-8748--99----764799977


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             7310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r  314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      ++.           ....+...+.+.|+.+..      ++.+|+=+--.++++||+++++++...++
T Consensus       283 ~~~-----------~~~~l~~~~~~~gv~~~~------~~~vR~Vth~~it~~dv~~~i~~~r~~l~  332 (333)
T PRK10534        283 GEE-----------NAAALGEYMRERNVLINA------SPIVRLVTHLDVSREQLAEVVAHWRAFLA  332 (333)
T ss_pred             CHH-----------HHHHHHHHHHHCCEEECC------CCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf             877-----------799999999987967579------98189998089999999999999999971


No 35 
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I).  TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.53  E-value=2.6e-11  Score=91.29  Aligned_cols=306  Identities=16%  Similarity=0.068  Sum_probs=184.6

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             88776896899998632103653289889999999999999996889985799974873489998753205789707997
Q gi|254780153|r   18 SGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        18 pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      .||   +|+ ++++|..+-.|  |-..-.....+++.+.++++|+-.   .++|++ |||.+.-.++..++.+++.+++.
T Consensus         8 t~p---~p~-m~~A~~~A~~g--d~~yg~D~~~~~le~~~a~l~g~e---aa~f~~-sGT~aN~~al~~~~~~~~~vi~~   77 (338)
T cd06502           8 TGP---TPE-MLEAMAAANVG--DDVYGEDPTTAKLEARAAELFGKE---AALFVP-SGTAANQLALAAHTQPGGSVICH   77 (338)
T ss_pred             CCC---CHH-HHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHCCC---EEEEEC-CCCHHHHHHHHHHCCCCCEEEEE
T ss_conf             889---999-99999806367--866678989999999999984898---299807-84189999999856999758850


Q ss_pred             E-CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----------CCEEEEEEECCCCEEECCEEE-----ECC
Q ss_conf             0-73688888765323876306740577765786767855-----------657997420242022032035-----025
Q gi|254780153|r   98 W-ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----------RDVVFVWNGTTSGVCVPDVGF-----IPE  160 (391)
Q Consensus        98 ~-g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~v~~~h~ETstGv~~~~~~~-----~~~  160 (391)
                      . .+....-..-.....+..+..+..+.|. .++++++..           ..+..+-|-|.-|...|..++     +|+
T Consensus        78 ~~aHi~~~E~g~~~~~~G~~~~~~~~~~g~-l~~~~i~~~i~~~~~~h~~~~~lv~ient~e~G~v~~~~el~~i~~~a~  156 (338)
T cd06502          78 ETAHIYTDEAGAPEFLSGVKLLPVPGENGK-LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAK  156 (338)
T ss_pred             CCCCEEEECCCCHHHHCCCEEEEEECCCCC-CCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHH
T ss_conf             467145653773998749625643389997-3899999963156886466520799873128963127999999999999


Q ss_pred             CCCCEEEEEEC------CHHHHCCCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             68614886401------1011025455-6857999700120017665154456778887654114457783123200112
Q gi|254780153|r  161 SREGLVICDAT------SAVFARHIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       161 ~~~~llivD~v------Ss~g~~p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                      +++..+-+|+-      -+.+.-+.++ ..+|.++.+.-|+++. |+=++++.+++.+++.......             
T Consensus       157 ~~gl~lH~DGARl~nA~~a~g~~~~~~~~~~Dsvs~~~sKglga-p~gavl~g~~~~i~~a~~~rK~-------------  222 (338)
T cd06502         157 ENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGA-PVGAVVVGNRDFIARARRRRKQ-------------  222 (338)
T ss_pred             HCCCEEEECCCCEECEEECCCCCHHHHHHHCCEEEEECCCCCCC-CCCEEEECCHHHHHHHHHHHHH-------------
T ss_conf             74972665365300445415999899864187899966566777-4324787788999999999986-------------


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             32103347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r  234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV  313 (391)
Q Consensus       234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~  313 (391)
                             .|+..  --...+.  ...+..++ ...+-.+.++..++++.+.+.+++.++...     ...  +|+.+..+
T Consensus       223 -------~Gg~m--rq~g~lA--Aa~~~~L~-~~~~~~~l~~dh~~A~~La~~l~~~~~~~~-----~~e--tniv~~~~  283 (338)
T cd06502         223 -------AGGGM--RQSGFLA--AAGLAALE-NDLWLRRLRHDHEMARRLAEALEELGGLES-----EVQ--TNIVLLDP  283 (338)
T ss_pred             -------HCCCH--HHHHHHH--HHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCC--CCEEEEEC
T ss_conf             -------47536--4599999--99999985-483789999999999999999986799766-----665--77589832


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             7310113734567888999998886282872665567675056861588899999999999999
Q gi|254780153|r  314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                      ...... +..     .......+.++|+.+..-+    +..+|+=+.-.++.+||+.+++.|+.
T Consensus       284 ~~~n~~-~~~-----~~~~~~~~~~~g~~~~~~~----~~~vR~Vt~~~~t~~dvd~~i~~ik~  337 (338)
T cd06502         284 VEANAV-FVE-----LSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             CCCCHH-HHH-----HHHHHHHHHHCCEEEEECC----CCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             754188-987-----4699999996896999469----99289998899999999999999962


No 36 
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.52  E-value=5.5e-11  Score=89.21  Aligned_cols=326  Identities=15%  Similarity=0.088  Sum_probs=198.5

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-
Q ss_conf             88688877689689999863210365----3289889999999999999996889985799974873489998753205-
Q gi|254780153|r   14 PFFSSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-   88 (391)
Q Consensus        14 ~~F~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-   88 (391)
                      -+|+...+.-+|. ..+++. .++..    .--.|...++-+++.+-+.++|+.|+..-  .++.|||.+.-.++...- 
T Consensus        27 ~~~~~~~~~~~~~-a~~a~~-~~~~~N~~~~~~~P~~~~mE~~vv~~~a~l~g~p~~~G--~~tsGGTes~l~Al~aaR~  102 (375)
T PRK13520         27 RILSSMCTKPHPI-AREAHE-MFLETNLGDPGLFPGTAKLEREVVRMLGELLHLPDAYG--YITSGGTEANIQAVRAARN  102 (375)
T ss_pred             HEEEEEECCCHHH-HHHHHH-HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE--EEECHHHHHHHHHHHHHHH
T ss_conf             7347764783499-999999-99961789853387799999999999999809998808--9956189999999999976


Q ss_pred             --CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC----CC-EEEEEEECCCCEEECCEEE--EC
Q ss_conf             --789707997073688888765323876306740577765786767855----65-7997420242022032035--02
Q gi|254780153|r   89 --GYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD----RD-VVFVWNGTTSGVCVPDVGF--IP  159 (391)
Q Consensus        89 --~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~-v~~~h~ETstGv~~~~~~~--~~  159 (391)
                        ..+.-.+++. .=.+-....++++-+.++..+........++++++..    .. +..+-..|.+|..=|+.++  +|
T Consensus       103 ~~~~~~p~iv~~-~~aH~s~~Kaa~~~gi~~~~vp~d~~~~~d~~~l~~~i~~~ti~vvatagtt~~G~iDpi~~i~~i~  181 (375)
T PRK13520        103 LADAEKPNIVVP-ESAHFSFDKAADMLGLELRRAPLDEDYRVDVKSVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIA  181 (375)
T ss_pred             HCCCCCCEEEEE-CCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCHHHHHHHH
T ss_conf             268999879996-7316999999997495569940388886989999998864957999925887882235999999999


Q ss_pred             CCCCCEEEEEECCHHHHCC-------CCC--CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf             5686148864011011025-------455--6857999700120017665154456778887654114457783123200
Q gi|254780153|r  160 ESREGLVICDATSAVFARH-------IDF--NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV  230 (391)
Q Consensus       160 ~~~~~llivD~vSs~g~~p-------~d~--~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~  230 (391)
                      .+++..+=||+...-...|       +|+  .++|-+....+|-+..|.|.|++.++++.+-+...  ...   .|+.  
T Consensus       182 ~~~~i~lHVDaa~GGf~~pf~~~~~~~df~l~~vdSIs~d~HK~g~~p~g~g~vl~r~~~~~~~~~--~~~---~Yl~--  254 (375)
T PRK13520        182 LENDIFLHVDAAFGGFVIPFLDDPYDFDFSLPGVSSITIDPHKMGLAPIPAGGILFRDPEFLDALD--VDT---PYLT--  254 (375)
T ss_pred             HHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHC--CCC---HHHC--
T ss_conf             975974998625520221125766400047788026424611136515771599987889998724--677---1435--


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             11232103347864466644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r  231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM  310 (391)
Q Consensus       231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~  310 (391)
                             .........|-|-+.+..+-.+|..+=. .|...+.+++.+.++.+.+.|++.+ ++... +|.   ..+++|
T Consensus       255 -------~~~~~tl~gSR~g~~~~~~Wa~l~~~G~-~Gy~~~~~~~~~~a~~la~~l~~~g-~e~~~-~P~---~~iV~F  321 (375)
T PRK13520        255 -------SKKQATLTGTRSGAGVAATYAVMKYLGR-EGYRKVVERCMENTRYLVEELEKLG-FEPVI-EPV---LNIVAF  321 (375)
T ss_pred             -------CCCCEEEECCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC-CEEEC-CCC---CEEEEE
T ss_conf             -------8987356058877559999999999739-9999999999999999999998679-98970-898---139999


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             82473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      +.++.              ..+...+.+.|..+..  ++ .+.++||-+++.++.+-++.+++-|+++.++
T Consensus       322 r~~~~--------------~~l~d~l~~~GW~v~~--~~-~P~~lhivv~~~~~~~~id~fl~DL~e~~~~  375 (375)
T PRK13520        322 DDPNP--------------HEVRKKLRERGWRVSV--TR-CPEALRIVVMPHVTREHIEAFLEDLDEVKKR  375 (375)
T ss_pred             ECCCH--------------HHHHHHHHHCCCEECC--CC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf             57999--------------9999999976987457--88-9984899995999989999999999999529


No 37 
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.51  E-value=1.2e-10  Score=87.06  Aligned_cols=328  Identities=14%  Similarity=0.146  Sum_probs=187.8

Q ss_pred             CCCCCCCCCCCCCC-CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             89988868887768-96899998632103653-28988999999999999999688998579997487348999875320
Q gi|254780153|r   10 KPKRPFFSSGPCAK-RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL   87 (391)
Q Consensus        10 ~p~~~~F~pGP~~~-~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl   87 (391)
                      +|+-++++.|=... +|..|++++.+.+-.-. ||-++-. -+.+.++.+.+.++.+.+.+|++ +.|++.++..++..+
T Consensus        21 ~~diI~L~~~e~~~~~p~~v~~a~~~~~~~~~~~~Y~~~~-g~~~Lr~aia~~~~~~~~~ei~v-t~G~~~~l~~~~~a~   98 (375)
T PRK06225         21 KPELIWLGQNTNHLHPHPEVRDAMIRAAKEGEYNKYAPPE-GFEELRELILADLGLDDDFDALV-TAGATESLYLVIRAF   98 (375)
T ss_pred             CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHHHHCCCCCCEEEE-CCCHHHHHHHHHHHH
T ss_conf             9990689999899885799999999996489878879963-58999999999868899974998-278899999999997


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE---ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE--
Q ss_conf             578970799707368888876532387630674---05777657867678-----55657997420242022032035--
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF---TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF--  157 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~--  157 (391)
                      +++||.+++..=.|..  ...+.+..+..+..+   ....+...+++.+.     ..+.+.++.=..-||...+..+.  
T Consensus        99 ~~pGD~vl~~~P~y~~--y~~~~~~~g~~~~~vpl~~~~~~~~~d~d~l~~~i~~~tk~i~l~nPnNPTG~v~s~~~l~~  176 (375)
T PRK06225         99 LSPGTNTVTSDPGYKI--IDNFANRFGAEVIEVPIYSEECDYKLTPEALKENVDEETKLIVLIDPLNPLGSSYTREEIKE  176 (375)
T ss_pred             CCCCCEEEECCCCCHH--HHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHH
T ss_conf             7998989984898335--99999984990574576685468878999999628888828998299899888788999999


Q ss_pred             ---ECCCCCCEEEEEEC-CHHHHC-CC--CCC-CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf             ---02568614886401-101102-54--556-857999700120017665--154456778887654114457783123
Q gi|254780153|r  158 ---IPESREGLVICDAT-SAVFAR-HI--DFN-KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIF  227 (391)
Q Consensus       158 ---~~~~~~~llivD~v-Ss~g~~-p~--d~~-~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~  227 (391)
                         +|..++.++|.|-+ +.+... +.  ... +-.+++.|.-|.++ .||  +|.++.+++.+++......        
T Consensus       177 l~~~a~~~~i~ii~DE~Y~~f~~~~~~~~~~~~~~~iv~~S~SK~~~-~~G~RiG~~i~~~~~i~~l~~~~~--------  247 (375)
T PRK06225        177 FAEIARDNDAYLVHDCTYRDFAREHTLAAEYAPEGTVTIYSFSKIFG-LAGLRIGAVVAAPDLLEQVAKYVV--------  247 (375)
T ss_pred             HHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHCCCCEEEECCCCHHCC-CHHHHHHHHCCCHHHHHHHHHHHC--------
T ss_conf             99999862770000221332067887234537787599823605135-734405141079999999998743--------


Q ss_pred             HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf             20011232103347864466644889999999986201031899999999779999999874797167668820036531
Q gi|254780153|r  228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTS  307 (391)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~  307 (391)
                                     + ...+++..-++...+|+.-  ..-++.+.+...++.+.+.+.++...+...-+ .|   +.++
T Consensus       248 ---------------~-~~~~~~~~q~aa~aal~~~--~~~~~~~~~~~~~~r~~~~~~l~~l~g~~~~~-~p---~~g~  305 (375)
T PRK06225        248 ---------------S-DLGANVIAQEAAIAGLKVK--SEWIERIRREDFRNQALIKEAVDEIEGVFLPV-YP---SHAN  305 (375)
T ss_pred             ---------------C-CCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE-EC---CCCE
T ss_conf             ---------------8-7887899999999998489--99999999999999999999985373885167-07---9745


Q ss_pred             EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC--CCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             78-982473101137345678889999988862828726655--676750-56861588899999999999999999999
Q gi|254780153|r  308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY--RDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      .. +.+.+...          ....+...|.++|+++..|.+  ...|.+ +||+..  .+.++++..++.|+.+.+++|
T Consensus       306 f~~~~~~~~g~----------~~~~~~~~l~e~gV~v~pG~~~~~~~g~~~iRis~~--~~~e~l~~a~~rl~~~l~~lr  373 (375)
T PRK06225        306 MLVIDTSEAGI----------RPEDLVEYLLERKIFVRQGTYTSKRFGDRFIRVSFS--IPREWVERFCEEFPDVVATLR  373 (375)
T ss_pred             EEEEECCCCCC----------CHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHHH
T ss_conf             99998668898----------999999999978909968986788789992999970--489999999999999999864


Q ss_pred             H
Q ss_conf             9
Q gi|254780153|r  384 I  384 (391)
Q Consensus       384 ~  384 (391)
                      -
T Consensus       374 ~  374 (375)
T PRK06225        374 K  374 (375)
T ss_pred             C
T ss_conf             5


No 38 
>pfam00155 Aminotran_1_2 Aminotransferase class I and II.
Probab=99.50  E-value=3.4e-10  Score=84.18  Aligned_cols=304  Identities=16%  Similarity=0.120  Sum_probs=166.4

Q ss_pred             CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHH----CCCCCC-EEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             96899998632103653-289889999999999999996----889985-799974873489998753205789707997
Q gi|254780153|r   24 RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVL----EVPENY-RIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~----~~p~~y-~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      +|. |++++.++.-+-+ |. ..-.+-..+.++.+.+++    +.+-+. ..+++++|++.++..++.-++++|+.+++.
T Consensus        16 ~p~-v~~A~~~a~~~~~~~~-Y~~~~G~~~LR~aia~~~~~~~~~~~~~e~~I~~t~G~~~~l~~~~~~l~~~gd~Vli~   93 (351)
T pfam00155        16 LPA-VAKAEKDALAGGTRNL-YGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGAGANIEALIFLLANPGDAILVP   93 (351)
T ss_pred             CHH-HHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             899-9999999974999980-79818789999999998601029999947489981139999999999966994999988


Q ss_pred             ECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCE
Q ss_conf             073688888765323876306740--57776578676785-----565799742024202203203-----502568614
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGL  165 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~l  165 (391)
                      .=.|..-  ....+..+..+..+.  ...+...++++++.     .+.+.++.-..-||...+..+     .++..++.+
T Consensus        94 ~P~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPTG~~~~~~~l~~l~~~a~~~~~~  171 (351)
T pfam00155        94 APTYASY--IRIARLAGGEVVRYPLYDSNDFHLDFDALEAALKEKPKVVLHESPHNPTGTVAPLEELEKLLDLAKEHNIL  171 (351)
T ss_pred             CCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf             9986889--99999839977898456434779899999975415986999889919877776889999998653028889


Q ss_pred             EEEEECCHHHHC---C-CC-----CCC-CEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             886401101102---5-45-----568-579997001200176651--54456778887654114457783123200112
Q gi|254780153|r  166 VICDATSAVFAR---H-ID-----FNK-LDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       166 livD~vSs~g~~---p-~d-----~~~-iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                      +|+|-+=+.+..   + ..     ... -.+++.|.-|.++ -||+  |.++.+++.+++........            
T Consensus       172 ii~DE~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~i~~~~~~i~~l~~~~~~~------------  238 (351)
T pfam00155       172 LLVDEAYAGFVFGSPDAVATRALLAEGPNLLVVGSFSKAFG-LAGWRVGYILGNAAVISQLRKLARPF------------  238 (351)
T ss_pred             EEEECCCCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHCC-CCCCCEEEEEECHHHHHHHHHHHCCC------------
T ss_conf             99826633315279888613331145786799913615237-93515599998999999999971668------------


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             3210334786446664488999999998620-103189999999977999999987479716766882003653178982
Q gi|254780153|r  234 RVMEGLFCGETINTPSLLCIEDYIDALLWLK-KMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI  312 (391)
Q Consensus       234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~-~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~  312 (391)
                                ...+|   .-.+...++.... ...-++.+.++.+++.+.+++.+.+.+ +.....    .+...+.+.+
T Consensus       239 ----------~~s~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~p----~g~~~~~~~~  300 (351)
T pfam00155       239 ----------YSSTH---LQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAG-LSVLPS----QAGFFLLTGL  300 (351)
T ss_pred             ----------CCCHH---HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCC----CCEEEEEEEC
T ss_conf             ----------74789---99999999958455689999999999999999999998789-857279----9449999978


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHH-HCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             4731011373456788899999888-62828726655676750568615888999999999999
Q gi|254780153|r  313 VDSDIASLDINSQKSFCKSMLSFLE-KEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       313 ~d~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      +..            ....+...|. +.|+++..|..-..+..+||+. .+.++|+++.++++|
T Consensus       301 ~~~------------~~~~~~~~Ll~~~gV~v~pG~~fg~~~~iRis~-a~~s~e~i~~~~~rl  351 (351)
T pfam00155       301 DPE------------TAKELAQVLLEEVGVYVTPGSSPGVPGWLRITV-AGGTEEELEELLEAI  351 (351)
T ss_pred             CCC------------CHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEE-CCCCHHHHHHHHHHC
T ss_conf             732------------299999999975989997788889999089981-789999999999419


No 39 
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.49  E-value=2.5e-10  Score=85.04  Aligned_cols=316  Identities=16%  Similarity=0.071  Sum_probs=196.8

Q ss_pred             CCCCC----CCCCCCHHHHHHHHHHHCC--CC-CCCCH---HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf             88688----8776896899998632103--65-32898---899999999999999968899857999748734899987
Q gi|254780153|r   14 PFFSS----GPCAKRPGWSLGILEGALL--GR-SHRCV---LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA   83 (391)
Q Consensus        14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~-sHRs~---~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~   83 (391)
                      .||++    |=+. +|. +.+++.+.+-  |. +.-|.   =...++.+..+.|.++++.++   ++++ .||..+.-++
T Consensus        45 lnf~SndYLGL~~-~p~-v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~lA~~~g~e~---allf-~SGy~aN~~~  118 (395)
T PRK06939         45 INFCANNYLGLAN-HPE-LIAAAKAALDSHGFGMASVRFICGTQDLHKELEQKLAKFLGTED---AILY-SSCFDANGGL  118 (395)
T ss_pred             EEEECCCCCCCCC-CHH-HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH
T ss_conf             9977676557889-989-99999999997299987768574783999999999999869994---9997-5527767889


Q ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC-CCEEEEEEECCCCEE---ECCE
Q ss_conf             53205789707997073688888765323876306740577765786767----855-657997420242022---0320
Q gi|254780153|r   84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD-RDVVFVWNGTTSGVC---VPDV  155 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~v~~~h~ETstGv~---~~~~  155 (391)
                      +..|+++++.++..--.  .....+..+.......  ..+.....+++..    ... ..-.++-.|..-.+.   -|+.
T Consensus       119 i~aL~~~~d~i~~D~l~--HaSiidG~~ls~a~~~--~f~HnD~~~Le~~L~~~~~~~~~~~~ivtegVfSMdGDiapL~  194 (395)
T PRK06939        119 FETLLGKEDAIISDALN--HASIIDGVRLCKAKRY--RYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIANLP  194 (395)
T ss_pred             HHHHCCCCCEEEEECCC--CHHHHHHHHHCCCCEE--EECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH
T ss_conf             99964799889984563--5889999986589479--9668999999999996002158628999966777787601599


Q ss_pred             EE--ECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf             35--02568614886401101102---------545-5685799970012001766515445677888765411445778
Q gi|254780153|r  156 GF--IPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL  223 (391)
Q Consensus       156 ~~--~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~  223 (391)
                      ++  +++.+++.++||=.=++|..         .+. ..++|++..+-.|+|+|- +=++|+.++..++-.....     
T Consensus       195 ~l~~L~~~y~a~L~vDeAH~~GvlG~~G~G~~e~~gl~~~vdi~~gTlsKA~~G~-~Ggfv~g~~~~i~~l~~~~-----  268 (395)
T PRK06939        195 EICDLADKYDALVMVDDSHAVGFLGENGRGTVEHCGVMDRVDIITGTLGKALGGA-SGGYTAGKKEVIDWLRQRS-----  268 (395)
T ss_pred             HHHHHHHHHCEEEEEECCCCEEEECCCCCCHHHHCCCCCCCEEEECCCHHHHHCC-CCCEEECCHHHHHHHHHHC-----
T ss_conf             9999999727379861430000345899867998099988689977327666247-6514516678899999847-----


Q ss_pred             CCHHHCCHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             312320011232103347864466-6448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  224 PKIFRMVKGGRVMEGLFCGETINT-PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~T-P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                                       +...+.| +|-..+.+..++|+.+++.   +.+.++-+++.+.+++.+.+.++ ...    ..
T Consensus       269 -----------------r~~ifStalpp~~~aa~~~al~~~~~~---~~~r~~L~~n~~~~r~~l~~~g~-~~~----~s  323 (395)
T PRK06939        269 -----------------RPYLFSNSLAPAIVAASIKVLELLEES---DELRDRLWENARYFREGMTAAGF-TLG----PG  323 (395)
T ss_pred             -----------------HHHHCCCCCCHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHCCC-CCC----CC
T ss_conf             -----------------122115799879999999999998749---59999999999999999996799-868----99


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             3653178982473101137345678889999988862828726655676750---5686158889999999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      .++ ++++.+.++.           ....+...|.++|+.+..-.|+.++++   +||......+.+||+.|+++|+.+-
T Consensus       324 ~sp-I~pi~iG~~~-----------~a~~~~~~L~~~Gi~v~~ir~PtVp~g~~rlRi~lta~ht~~did~lv~~l~~v~  391 (395)
T PRK06939        324 EHP-IIPVMLGDAK-----------LAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG  391 (395)
T ss_pred             CCC-EEEEEECCHH-----------HHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             999-7999969999-----------9999999999779748207899889898569988787799999999999999999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780153|r  380 YFQ  382 (391)
Q Consensus       380 ~~~  382 (391)
                      ++.
T Consensus       392 ~~l  394 (395)
T PRK06939        392 KEL  394 (395)
T ss_pred             HHC
T ss_conf             963


No 40 
>PRK07179 hypothetical protein; Provisional
Probab=99.49  E-value=1.5e-10  Score=86.43  Aligned_cols=309  Identities=15%  Similarity=0.102  Sum_probs=194.0

Q ss_pred             CHHHHHHHHHHHCC--CC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             96899998632103--65----3289889999999999999996889985799974873489998753205789707997
Q gi|254780153|r   24 RPGWSLGILEGALL--GR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l--~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      +|+ |.++..+++-  |.    |..-.-..++..+..+.|.++++.++   ++++ +||-.+.-+++..|.++++.++..
T Consensus        70 hp~-v~~a~~~ai~~~G~g~~~Srl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~i~aL~~~~d~I~~D  144 (408)
T PRK07179         70 HPD-IIKAQIAALQEYGDGLVMSAVFLHDDSPKPQFEKKLAAFTGFES---GLLC-QSGWAANVGLLQTIADPNTPVYID  144 (408)
T ss_pred             CHH-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             999-99999999998499987468031675899999999999868992---9998-753899999999967999889998


Q ss_pred             ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCC-CCEEEEEEECC---CCEEECCEEE--ECCCCCCEEEEEE
Q ss_conf             073688888765323876306740577765786767-855-65799742024---2022032035--0256861488640
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFD-RDVVFVWNGTT---SGVCVPDVGF--IPESREGLVICDA  170 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~v~~~h~ETs---tGv~~~~~~~--~~~~~~~llivD~  170 (391)
                        .+..--.-+..+..+..+.  ........+++.. +.. ..+.+|  |..   .|-.-|+.++  +++.+++.++||=
T Consensus       145 --~~~HaSi~dG~rls~a~~~--~f~HND~~~Le~~L~~~~~~iIv~--egVfSMdGDiapL~~l~~la~~y~a~L~VDE  218 (408)
T PRK07179        145 --FFAHMSLWEGVRAAGAQAH--PFRHNDVDHLRRQIERHGPGIIVV--DSVYSTTGTIAPLVDIVDIAEEFGCVLVVDE  218 (408)
T ss_pred             --CCCCHHHHHHHHHCCCCEE--EECCCCHHHHHHHHHHCCCCEEEE--EECCCCCCCCCCHHHHHHHHHHHCEEEEEEC
T ss_conf             --8778889876761488579--947999999999998469977999--7423578876689999999987267988614


Q ss_pred             CCHHHHC---------CCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC
Q ss_conf             1101102---------5455-68579997001200176651544567788876541144577831232001123210334
Q gi|254780153|r  171 TSAVFAR---------HIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF  240 (391)
Q Consensus       171 vSs~g~~---------p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (391)
                      .=++|..         .+.. .++|++..+-.|+||+-.|  +|+.|++..+-......  +  ..              
T Consensus       219 AH~~Gv~G~~G~G~~~~~gl~~~vdi~~gTlsKA~G~~GG--fi~gs~~~id~L~~~ar--~--~I--------------  278 (408)
T PRK07179        219 SHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRAG--IITCPAELAEYFPFVSY--P--AI--------------  278 (408)
T ss_pred             CCEEEEECCCCCCHHHHCCCCCCCEEEEEEHHHHHHHCCC--CEECCHHHHHHHHHHCC--C--CC--------------
T ss_conf             3505236799987799849987872899371786763766--34237999999997187--7--45--------------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf             78644666448899999999862010318999999997799999998747971676688200365317898247310113
Q gi|254780153|r  241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL  320 (391)
Q Consensus       241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~  320 (391)
                       .++  ++|-..+.+...+|+.+.++   +.+.++-+++.+.+++.+...++ ..    ....|+ ++++.+.++.    
T Consensus       279 -fSt--al~P~~~aa~~aal~ii~~~---~~~r~~L~~n~~~~r~~L~~~G~-~i----~~s~sp-Ivpi~~G~~~----  342 (408)
T PRK07179        279 -FSS--TLLPHEIAGLEATLEVIESA---DERRARLHANARFLREGLSELGY-NI----RSSESQ-IIALETGSER----  342 (408)
T ss_pred             -CCC--CCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC----CCCCCC-EEEEECCCHH----
T ss_conf             -566--67899999999999998629---99999999999999999983799-97----899999-7999859999----


Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7345678889999988862828726655676750---56861588899999999999999999999987
Q gi|254780153|r  321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF  386 (391)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~  386 (391)
                             ....+...|.++|+.+..-.|+.++++   +||+.....+.+||+.|+++|+.+..+....+
T Consensus       343 -------~a~~~~~~L~~~Gi~v~~i~~PtVP~g~~rlRislsA~ht~~dId~ll~~l~~~~~e~~l~~  404 (408)
T PRK07179        343 -------NTEVLRDALEERNVFGAVFCAPATPKNRALIRLSLNADLTKSDLDRVLEVCREARDEVDLWF  404 (408)
T ss_pred             -------HHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             -------99999999997896284167998999981699874877999999999999999999809875


No 41 
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.48  E-value=4.8e-10  Score=83.26  Aligned_cols=296  Identities=16%  Similarity=0.127  Sum_probs=180.6

Q ss_pred             CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHH
Q ss_conf             96899998632103653-28988999999999999999688998579997487348999875320578970799707368
Q gi|254780153|r   24 RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFG  102 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~  102 (391)
                      +|. +.+++...+-..+ ||=|+-.  ..+.++.|.+.+++|++..|++. .|+...++.++..++++|+.+++..-.|+
T Consensus        41 ~~~-v~~ai~~~~~~~~lnrYPd~~--~~~Lr~~lA~~~gv~~~~~Ii~G-nGSdElI~~i~~~~~~pgd~vl~~~Ptf~  116 (356)
T PRK04870         41 PAE-LQAELGERLAEVALNRYPDPR--AAALKAALRAAMGVPAGADVLLG-NGSDELIQLIALACAKPGAKVLAPVPGFV  116 (356)
T ss_pred             CHH-HHHHHHHHHHCCCCCCCCCCC--HHHHHHHHHHHHCCCCCCEEEEC-CCHHHHHHHHHHHHHCCCCEEEECCCCHH
T ss_conf             999-999999975122437798998--99999999998687987769981-67999999999998189898997677766


Q ss_pred             HHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCC--CCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH-
Q ss_conf             888876532387630674057776578676----785--5657997420242022032035--0256861488640110-
Q gi|254780153|r  103 LGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDF--DRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA-  173 (391)
Q Consensus       103 ~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~--~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs-  173 (391)
                      ..  ..+++..+..+..+........+++.    +..  .+.+.+|.=..-||...+..++  ++...+.++|+|-.=. 
T Consensus       117 ~Y--~~~a~~~g~~~~~vpl~~d~~~d~~~~~~~i~~~~~klv~i~nPNNPTG~~~~~~~l~~l~~~~~~lvVvDEAY~e  194 (356)
T PRK04870        117 MY--RMSAKFAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVYLAYPNNPTGNLFDDADVEAIIAAAPGLVVIDEAYQP  194 (356)
T ss_pred             HH--HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHH
T ss_conf             89--9999982987999846876562128899874146873899768999766336878899998506986552254075


Q ss_pred             HHHCC-CC-CCCC-EEE-EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCC
Q ss_conf             11025-45-5685-799-97001200176651--5445677888765411445778312320011232103347864466
Q gi|254780153|r  174 VFARH-ID-FNKL-DVV-TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINT  247 (391)
Q Consensus       174 ~g~~p-~d-~~~i-Dv~-~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T  247 (391)
                      |.... ++ ..+. .++ .-+.-| + |-||+  |.++.+++.++++.+...+                         +.
T Consensus       195 F~~~s~~~~~~~~~nlivlRTfSK-~-glaGlRvGy~ia~~~~i~~l~k~~~p-------------------------~~  247 (356)
T PRK04870        195 FAGRSWLPRAAEFPNVLVMRTVSK-L-GLAGLRLGYLAGHPAWIAELDKVRPP-------------------------YN  247 (356)
T ss_pred             HCCCCCCHHHHCCCCEEEEECCCC-C-CCCCCCEEEEEECHHHHHHHHHHCCC-------------------------CC
T ss_conf             567862101203796899860541-0-13656627775099999999773489-------------------------87


Q ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHH
Q ss_conf             6448899999999862010318999999997799999998747971676688200365317898-247310113734567
Q gi|254780153|r  248 PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQK  326 (391)
Q Consensus       248 P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~  326 (391)
                      -+.....+...+|+   ..+-++...++..+-.+.+++.+.+..++..+.      |.+|..+. +++            
T Consensus       248 vn~~a~~aa~~aL~---d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p------S~aNFil~~~~~------------  306 (356)
T PRK04870        248 VNVLTQATALFALE---HVDVLDAQAAELRAERTRLAAALAALPGVTVFP------SAANFILVRVPD------------  306 (356)
T ss_pred             CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC------CCCEEEEEECCC------------
T ss_conf             33999999999974---958899999999999999999998369978889------988089998899------------


Q ss_pred             HHHHHHHHHHHHCCEEECC-CCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             8889999988862828726-655-676750568615888999999999999999
Q gi|254780153|r  327 SFCKSMLSFLEKEEIAYDI-GSY-RDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       327 ~~~~~~~~~l~~~g~~~~~-~~~-r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                        .+.+...|.++|+++.- .++ ...+..+||+.+   ++++.++|+++|+.+
T Consensus       307 --a~~l~~~L~~~gIlVR~~~~~~~~~~~~lRIsig---t~een~~ll~aLk~~  355 (356)
T PRK04870        307 --AAAVFDGLKTRRVLVKNVSGMHPLLANCLRVTVG---SPEENAQFLAALKLA  355 (356)
T ss_pred             --HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHH
T ss_conf             --9999999996990999889888889998999839---999999999999985


No 42 
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.48  E-value=2.1e-10  Score=85.53  Aligned_cols=298  Identities=13%  Similarity=0.066  Sum_probs=183.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC----
Q ss_conf             88877689689999863210365----3289889999999999999996889985799974873489998753205----
Q gi|254780153|r   17 SSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL----   88 (391)
Q Consensus        17 ~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~----   88 (391)
                      -|+++. +|. ++..+-...++.    .--+|-..++=+++.+-+.++++.|+..-.=.+++|||.+.-.+++---    
T Consensus         5 ~~~~~~-~~~-~l~d~l~~~~n~~~~~~~~sP~~t~lE~~vi~wl~~l~g~p~~~~~G~~tsGgs~anl~al~~AR~~~~   82 (345)
T cd06450           5 FVTTMD-PPA-LLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRAR   82 (345)
T ss_pred             CCCCCC-HHH-HHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf             758998-999-999999962176787643485899999999999999838997788769827568999999999999998


Q ss_pred             --------CCCCE-EEEE--ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----------CCEEEEEEEC
Q ss_conf             --------78970-7997--073688888765323876306740577765786767855-----------6579974202
Q gi|254780153|r   89 --------GYRGV-DVLA--WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----------RDVVFVWNGT  146 (391)
Q Consensus        89 --------~~~~~-~~~~--~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~v~~~h~ET  146 (391)
                              ..... .+++  ..+++-.   .++.+.+..+..+..+.....+.+.++..           -.+..+-..|
T Consensus        83 ~~~~~~~~~~~~~~~v~~s~~aH~Sv~---KAa~ilg~~~~~vp~d~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT  159 (345)
T cd06450          83 KRLKAGGGRGIDKLVIVCSDQAHVSVE---KAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTT  159 (345)
T ss_pred             HHHHHCCCCCCCCEEEEECCCCCHHHH---HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             888741677888769998897528999---99997489769975399980889999999999986699738999557876


Q ss_pred             CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCC--------CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHH
Q ss_conf             42022032035--02568614886401101102545--------568579997001200176651544567788876541
Q gi|254780153|r  147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHID--------FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEK  216 (391)
Q Consensus       147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d--------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~  216 (391)
                      .||..=|+.++  +|++++.-+=||+.-.-...+.+        .+..|-+....+|.++.|.+.+++.++  +      
T Consensus       160 ~~GaiD~l~~i~~i~~~~~iwlHVDaA~GG~~~~~~~~~~~~~gie~aDSit~d~HK~l~~p~~~~~~l~r--a------  231 (345)
T cd06450         160 DTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR--A------  231 (345)
T ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEECHHCCHHHCCCCCCHHHCCCCCCCEEEECCHHCCCCCCCCEEEEHH--H------
T ss_conf             76256789999999998499477510001201106220076579999888998812224878882688618--8------


Q ss_pred             CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r  217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL  296 (391)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~  296 (391)
                                                       . -+|   ..|+.+= ..|+..+.+++-++++.+++.+++.+.++.+
T Consensus       232 ---------------------------------l-klw---~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~el~  273 (345)
T cd06450         232 ---------------------------------L-KLW---ATLRRFG-RDGYGEHIDRIVDLAKYLAELIRADPGFELL  273 (345)
T ss_pred             ---------------------------------H-HHH---HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             ---------------------------------8-999---9999998-9999999999999999999999629898996


Q ss_pred             CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC-EEEEECCCCC-CHHHHHHHHHH
Q ss_conf             688200365317898247310113734567888999998886282872665567675-0568615888-99999999999
Q gi|254780153|r  297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPL-GLRVWVGVTV-EKEDLLLLCDW  374 (391)
Q Consensus       297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~-~~RIg~~g~i-~~~dv~~L~~a  374 (391)
                      .. +   ...+|||+..++...  +     .....+...+.+.|..+ +.+.+.-|+ .+|+.+.+.. +.+||+.|++.
T Consensus       274 ~~-p---~l~iV~Fr~~~~~~~--d-----~~~~~l~~~l~~~g~~~-vs~t~~~g~~~lR~~i~n~~tt~~di~~l~~~  341 (345)
T cd06450         274 GE-P---NLSLVCFRLKPSVKL--D-----ELNYDLSDRLNERGGWH-VPATTLGGPNVLRFVVTNPLTTRDDADALLED  341 (345)
T ss_pred             CC-C---CEEEEEEEECCCHHC--C-----HHHHHHHHHHHHCCCEE-EEEEEECCEEEEEEEECCCCCCHHHHHHHHHH
T ss_conf             69-9---658999997682011--4-----89999999998139999-86159999789999979999999999999999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780153|r  375 LRW  377 (391)
Q Consensus       375 Le~  377 (391)
                      |+.
T Consensus       342 i~~  344 (345)
T cd06450         342 IER  344 (345)
T ss_pred             HHH
T ss_conf             974


No 43 
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold.  In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.48  E-value=2.7e-11  Score=91.21  Aligned_cols=294  Identities=10%  Similarity=0.005  Sum_probs=176.2

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEECC-C-CC
Q ss_conf             999999999996889985799974873489998753205789707997-07368888876532387630674057-7-76
Q gi|254780153|r   50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTAP-Y-GS  126 (391)
Q Consensus        50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~~-~-g~  126 (391)
                      +++..+.+.++++. |  .++|++ |||.++.++++.++++||.+++. +.+++.-   .+....+..+..+... + ..
T Consensus        46 i~efe~~aAeflG~-d--~A~~V~-Ggt~Gnqa~i~t~c~~GD~VIv~~naH~S~~---~a~~laG~~~~~v~~~~~~~~  118 (361)
T cd06452          46 IKDFHHDLAEFLGM-D--EARVTP-GAREGKFAVMHSLCEKGDWVVVDGLAHYTSY---VAAERAGLNVREVPNTGHPEY  118 (361)
T ss_pred             HHHHHHHHHHHCCC-C--EEEEEC-CCCHHHHHHHHHHHCCCCEEEECCCCHHHHH---HHHHHCCCEEEEECCCCCCCC
T ss_conf             89999999987199-6--699946-8520899999998479988985575128899---888863846999567768566


Q ss_pred             CCCHHHC----C-------CCCC-EEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEEC
Q ss_conf             5786767----8-------5565-7997420242022032035--0256861488640110110254556--85799970
Q gi|254780153|r  127 LPDFSKV----D-------FDRD-VVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFS  190 (391)
Q Consensus       127 ~~~~~~~----~-------~~~~-v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~  190 (391)
                      ..+++..    +       ..+. +.++|..-.-|...+..++  ++|.++.++++|+.=+.+-+|.+..  +.|.+..|
T Consensus       119 ~i~pe~~~~~Iee~~~e~g~~p~Lilit~~dy~yG~~~dl~~I~~iah~y~iPvlvD~A~~~g~lpv~a~~~gaD~v~~s  198 (361)
T cd06452         119 HITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGS  198 (361)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHCCCCEEEEE
T ss_conf             51889999999999986189964999966787736631379999999985996897154224757987545079689986


Q ss_pred             CHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             01200176651544567788876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r  191 AQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS  270 (391)
Q Consensus       191 sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~  270 (391)
                      .+|.|+.+...|++..+++..++......... -+...           .-|.   |..-..+|+|-..++-.+++  ++
T Consensus       199 ~hK~~~a~~p~gvL~~~~~~~~~v~R~~~~~~-~K~~~-----------~Lg~---t~~~~~~~~lmAS~~~~~~~--v~  261 (361)
T cd06452         199 GHKSMAASAPIGVLATTEEWADIVFRTSQMFK-IKEVE-----------LLGC---TLRGAPLVTLMASFPHVKER--VK  261 (361)
T ss_pred             CCCCCCCCCCEEEEEECCHHHHHHHHHCCCCH-HHHHH-----------HHCC---CCCCCHHHHHHCCCHHHHHH--HH
T ss_conf             56555345743788505067888874110110-45778-----------7467---86551799998072999999--98


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf             99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r  271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD  350 (391)
Q Consensus       271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~  350 (391)
                       ++..--++++.+.+.+.+.++++.+-.+|.  ....+.|..  +.+......+.... ..+...|.++|+....-+   
T Consensus       262 -~~~eev~~ar~~~~el~kI~G~~~~ge~p~--~~dl~~~dt--~~~~~~~~~~~~~G-~~L~~~L~~rgI~~~~~g---  332 (361)
T cd06452         262 -RWDEEVEKARWFVAELEKIEGIKQLGEKPK--NHDLMFFET--PSFDEIAKKHKRRG-YFLYSELKKRGIHGIKPG---  332 (361)
T ss_pred             -HHHHHHHHHHHHHHHHHCCCCHHHCCCCCC--CCCCEEECC--CCCEEEEECCCCCC-CHHHHHHHHCCCEEECCC---
T ss_conf             -777899999999999842845312155777--677456147--86324410478650-069999987697687168---


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             675056861588899999999999999
Q gi|254780153|r  351 APLGLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       351 ~~~~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                      .-+.+.+++|| ++.|+++.|++|+.+
T Consensus       333 ~t~~~~~~tyG-~t~e~i~~l~~a~ke  358 (361)
T cd06452         333 LTRYFKLSTYG-LTWEQVEYVVDAFKE  358 (361)
T ss_pred             CCCEEEEEEEC-CCHHHHHHHHHHHHH
T ss_conf             53379999951-688899999999999


No 44 
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.48  E-value=4e-10  Score=83.76  Aligned_cols=315  Identities=17%  Similarity=0.097  Sum_probs=193.4

Q ss_pred             CCCC----CCCCCCHHHHHHHHHHHCC--CCCCCC----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf             8688----8776896899998632103--653289----88999999999999999688998579997487348999875
Q gi|254780153|r   15 FFSS----GPCAKRPGWSLGILEGALL--GRSHRC----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMAL   84 (391)
Q Consensus        15 ~F~p----GP~~~~p~~v~~~~~~~~l--~~sHRs----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~   84 (391)
                      ||++    |=+. +|+ |.+++.+.+-  |.+--+    .=...++.+..+.|.++++.++   ++++ .||..++-+++
T Consensus        49 ~f~SNdYLGL~~-~p~-v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~i  122 (404)
T PRK13393         49 VWCSNDYLGMGQ-HPA-VLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA---ALLF-TSGYVSNWAAL  122 (404)
T ss_pred             EEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHHH
T ss_conf             877434457678-999-99999999998689987660201887999999999999869991---9998-74488899999


Q ss_pred             HHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCCCCCEEEEEEECCCCEE---ECCE
Q ss_conf             320578--970799707368888876532387630674057776578676----7855657997420242022---0320
Q gi|254780153|r   85 WSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDFDRDVVFVWNGTTSGVC---VPDV  155 (391)
Q Consensus        85 ~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~v~~~h~ETstGv~---~~~~  155 (391)
                      ..|.++  ++.++..  .......-+..+..+..+..  .......+++.    .+.... .++-.|..-.+.   -|..
T Consensus       123 ~aL~~~~~~d~i~~D--~l~HaSi~dG~rls~a~~~~--f~HnD~~~Le~~L~~~~~~~~-~lIv~egVfSMdGDiapL~  197 (404)
T PRK13393        123 STLASRLPGCVILSD--ELNHASMIEGIRHSRAETRI--FRHNDPADLERKLSDLDPHAP-KLVAFESVYSMDGDIAPIA  197 (404)
T ss_pred             HHHHCCCCCCEEEEE--CCCCHHHHHHHHHCCCCEEE--EECCCHHHHHHHHHHCCCCCC-CEEEEEEECCCCCCCCCHH
T ss_conf             998578999789998--75459899988854798799--827999999999985622488-0899965535578856899


Q ss_pred             EE--ECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf             35--02568614886401101102---------545-5685799970012001766515445677888765411445778
Q gi|254780153|r  156 GF--IPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL  223 (391)
Q Consensus       156 ~~--~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~  223 (391)
                      ++  +++.+++.++||=.=++|..         .+. .+++|++..+-.|+||+-.|  +|+.|+...+-......+   
T Consensus       198 el~~L~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~gl~~~vdi~~gTfsKA~Gs~Gg--~v~gs~~~id~L~~~ar~---  272 (404)
T PRK13393        198 EICDVADKHGAMTYLDEVHAVGLYGPRGGGIAERDGLADRLTIIEGTLAKAFGVVGG--YITGSAALCDFIRSFASG---  272 (404)
T ss_pred             HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCC--EEECCHHHHHHHHHHCHH---
T ss_conf             999999740949998443200103689987888738988762899717764335775--031476889999984728---


Q ss_pred             CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             31232001123210334786446664488999999998620103189999999977999999987479716766882003
Q gi|254780153|r  224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR  303 (391)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r  303 (391)
                       ..               .+|.  +|-..+.+...+++.++++   +.+.+|.+++...+++.+...++ ...    ...
T Consensus       273 -~I---------------fSta--lpP~~~aa~~~al~~l~~~---~~~r~~L~~n~~~~r~~L~~~G~-~~~----~s~  326 (404)
T PRK13393        273 -FI---------------FTTS--LPPAVAAGALASIRHLKAS---SAERERHQDRVARLRARLDQAGV-PHM----DNP  326 (404)
T ss_pred             -HH---------------HCCC--CCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CCC----CCC
T ss_conf             -65---------------2779--8899999999999998619---69999999999999999996699-978----999


Q ss_pred             CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             653178982473101137345678889999988862-828726655676750---5686158889999999999999999
Q gi|254780153|r  304 SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       304 S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      |+ ++++.+.++.           ....+...|.++ |+.+..-.|+.++++   +||.+....+.+||+.|+++|+.+.
T Consensus       327 s~-Iipi~ig~~~-----------~a~~~~~~Ll~~~Gi~v~~i~~PtVP~g~~rLRi~lsA~ht~~did~l~~~L~~v~  394 (404)
T PRK13393        327 SH-IVPVMVGDAV-----------LCKQISDLLLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIW  394 (404)
T ss_pred             CC-EEEEEECCHH-----------HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             88-7999969999-----------99999999986189899988898589997359987688799999999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  380 YFQK  383 (391)
Q Consensus       380 ~~~k  383 (391)
                      ++..
T Consensus       395 ~~lg  398 (404)
T PRK13393        395 ARLG  398 (404)
T ss_pred             HHCC
T ss_conf             9839


No 45 
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.45  E-value=9.1e-10  Score=81.49  Aligned_cols=310  Identities=15%  Similarity=0.113  Sum_probs=184.7

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             8868887768-968999986321036532898899999999999999968899857999748734899987532057897
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG   92 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~   92 (391)
                      ..|+.|=.+. +|..+.+++...+- ..||=|+..  ..+.++.+.+.++++.+ .+++...|++.++..++.-++++|+
T Consensus        38 i~ls~nenp~gp~p~v~~a~~~~~~-~~~~YPd~~--~~~Lr~aiA~~~gv~~e-~ii~~gnGs~e~i~~l~~~~~~~Gd  113 (369)
T PRK00950         38 IKLGSNENPLGPSPKAVEALIDEAP-NIHQYPEPD--APELREAISKYTGVPVE-NIIVGGDGADEIIDVLMRILIDEGD  113 (369)
T ss_pred             EEECCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCC--HHHHHHHHHHHHCCCCC-CEEEECCCHHHHHHHHHHHHHCCCC
T ss_conf             8812989986788999999998753-258799988--89999999998681975-8799756499999999999957999


Q ss_pred             EEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE--ECCCCC
Q ss_conf             07997073688888765323876306740--577765786767-----855657997420242022032035--025686
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF--IPESRE  163 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~--~~~~~~  163 (391)
                      .+++.+=+|+..  ....+..+..+....  ...+...+++++     +..+.+.++.=..-||...+..++  ++...+
T Consensus       114 ~vl~~~P~y~~Y--~~~a~~~G~~~~~v~~~~~~~f~~d~~~l~~~i~~~tklv~l~nPnNPTG~~~~~~el~~l~~~~~  191 (369)
T PRK00950        114 EVIIPIPTFTYY--EISARACGAKPVYAKFDREEDFKLDVESVLNAITDKTKIIFLCTPNNPTGNLIPEEDIRKIVESTD  191 (369)
T ss_pred             EEEECCCCCHHH--HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHCCC
T ss_conf             999898873036--999998398202236771249988999999736767608998089998783247999878987188


Q ss_pred             CEEEEEECCH-HHHCCC-----CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             1488640110-110254-----5568579997001200176651--5445677888765411445778312320011232
Q gi|254780153|r  164 GLVICDATSA-VFARHI-----DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       164 ~llivD~vSs-~g~~p~-----d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      .++|+|=+=. |...+.     +.+++ ++.-+.-|.++ -||+  |.++.+++.++.......                
T Consensus       192 ~~vv~DEaY~ef~~~~~~~l~~~~~n~-iv~~SfSK~~~-laGlRlGy~i~~~~li~~l~~~~~----------------  253 (369)
T PRK00950        192 ALVFVDEAYIEFAEYDLTELALEYDNV-LVLRTFSKVFG-LAGMRIGYGIMPKWIIEYMMRIKP----------------  253 (369)
T ss_pred             EEEEECCCHHHHCCCCHHHHHHHCCCE-EEEEECCHHHH-CCCCEEEEEECCHHHHHHHHHHCC----------------
T ss_conf             799942426752579715678745865-89841215540-577504676469999999998568----------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECC
Q ss_conf             103347864466644889999999986201031899999999779999999874797167668820036531789-8247
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVD  314 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d  314 (391)
                               +++-+.....+...+|+   .+.-++...+..++..+.+.+.+.+.+++....      |.++..+ .+++
T Consensus       254 ---------~~~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~l~~~~v~p------s~anFil~~~~~  315 (369)
T PRK00950        254 ---------PFSLTRLSQAAAIAALR---DKEFIEKSIELGIESREYLYEGLKKFKPLKVYP------SEANYVLVDVKP  315 (369)
T ss_pred             ---------CCCHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC------CCCEEEEEECCC
T ss_conf             ---------75706999999999950---958899999999999999999998579977878------986189998999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             310113734567888999998886282872665-5676750-5686158889999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      . .          ....+...|.++|+++.-+. ++..+++ +||+.+   ++++.++|+++|+..+
T Consensus       316 ~-~----------~~~~~~~~Ll~~gI~Vr~g~~f~~~~~~~iRisig---t~~en~~ll~al~~il  368 (369)
T PRK00950        316 G-M----------TAKEFTEELLKKGVIVRDCTSFEGLGDYYIRVSIG---TLEENERFLEILKEIV  368 (369)
T ss_pred             C-C----------CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHH
T ss_conf             9-9----------99999999996995999687777789898999808---9999999999999985


No 46 
>TIGR00858 bioF 8-amino-7-oxononanoate synthase; InterPro: IPR004723   8-amino-7-oxononanoate synthase (2.3.1.47 from EC) is involved in biotin biosynthesis.   Synonym(s): AONS, 8-amino-7-ketopelargonate synthase, 7-keto-8-amino-pelargonic acid synthetase, 7-KAP synthetase; GO: 0008710 8-amino-7-oxononanoate synthase activity, 0009102 biotin biosynthetic process.
Probab=99.44  E-value=6.5e-11  Score=88.74  Aligned_cols=303  Identities=14%  Similarity=0.047  Sum_probs=200.4

Q ss_pred             CCCCHHHHHHH-HHHHCC--C----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC----
Q ss_conf             76896899998-632103--6----532898899999999999999968899857999748734899987532057----
Q gi|254780153|r   21 CAKRPGWSLGI-LEGALL--G----RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG----   89 (391)
Q Consensus        21 ~~~~p~~v~~~-~~~~~l--~----~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~----   89 (391)
                      ++ +|+ |.++ ..+..-  |    =||--.=...++++..+.|.++.+++.  -++|  |||..|+-+++..|++    
T Consensus        37 a~-hp~-l~~af~~~~~~~~G~Gs~aSrLv~G~~~~H~~LE~~lA~~kg~Ea--ALlF--sSGY~AN~Gvi~aL~~~~~l  110 (378)
T TIGR00858        37 AS-HPE-LIQAFAQQAAEQYGAGSTASRLVTGNSPLHEELEEELAEFKGTEA--ALLF--SSGYLANVGVISALVGKRVL  110 (378)
T ss_pred             CC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--EEEE--HHHHHHHHHHHHHHHHCCCC
T ss_conf             37-988-999999999986687736743403785689999999998628820--3420--02789999999987515765


Q ss_pred             -CCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECC---EE--EEC
Q ss_conf             -89707997073688888765323876306740577765786767----855657997420242022032---03--502
Q gi|254780153|r   90 -YRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPD---VG--FIP  159 (391)
Q Consensus        90 -~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~---~~--~~~  159 (391)
                       ++|.+  ..-.+..--..+.++.-++.+.+  .+.+....++..    .....-.++=.|++=-|--+.   .+  .+|
T Consensus       111 ~~~Dli--lsD~LNHASl~dG~rLS~A~~~~--y~H~D~~~L~~lL~~~~g~~~~~livTDGVFSMDGD~APL~~L~~la  186 (378)
T TIGR00858       111 EKGDLI--LSDALNHASLIDGCRLSGARVLR--YRHNDVEHLERLLEKNRGKERRKLIVTDGVFSMDGDIAPLPQLVALA  186 (378)
T ss_pred             CCCCEE--EEHHHHHHHHHHHHHCCCCCEEE--CCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCHHHHHHHH
T ss_conf             678604--42025477789864159862787--06899899999997401513776889700131688848978999999


Q ss_pred             CCCCCEEEEE--------ECCHHHHC-CCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             5686148864--------01101102-545--568579997001200176651544567788876541144577831232
Q gi|254780153|r  160 ESREGLVICD--------ATSAVFAR-HID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR  228 (391)
Q Consensus       160 ~~~~~llivD--------~vSs~g~~-p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~  228 (391)
                      +.+++.|+||        +-+..|.. .+.  ...+|+.+..--|+||+-.|  +|+.|+.+.+=+.+..          
T Consensus       187 ~~~~A~L~VDDAHgtGVlG~~G~G~~~~fgl~~~~~~i~~GTlSKAlGs~Ga--~V~g~~~l~~yL~n~A----------  254 (378)
T TIGR00858       187 ERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPAPVDIQVGTLSKALGSYGA--YVAGSEALIDYLINRA----------  254 (378)
T ss_pred             HHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHHHCHH--HHHHHHHHHHHHHHCC----------
T ss_conf             8709889998654536628875414976598888726998613166540525--6354589999998415----------


Q ss_pred             CCHHHHHHCCCCCCCCCC---CCCHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             001123210334786446---664488999999998620-1031899999999779999999874797167668820036
Q gi|254780153|r  229 MVKGGRVMEGLFCGETIN---TPSLLCIEDYIDALLWLK-KMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS  304 (391)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~---TP~v~~i~al~~~l~~i~-~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS  304 (391)
                                   ..++|   .||- .+-+..++|+.|. ++   .++.++=.++.+.+++.+++.+-+.+ .. ....|
T Consensus       255 -------------R~~If~TaLPPa-~~aA~~aAl~~i~~~~---~~rr~~L~~~~~~~~~~l~~~~~~~f-~~-~~~~T  315 (378)
T TIGR00858       255 -------------RTFIFSTALPPA-VVAAALAALELIQEEE---PWRREKLLALIARLRKGLEALGKLVF-QL-MPSET  315 (378)
T ss_pred             -------------CCCEECCCCCHH-HHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHCCCCCC-EE-CCCCC
T ss_conf             -------------764232366588-9999999999722248---64789999999999999875476631-01-67898


Q ss_pred             CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             53178982473101137345678889999988862828726655676750---5686158889999999999999
Q gi|254780153|r  305 NTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      + ++++.+.|+..+        .   .+.+.|.++|+.+..=.++++|+|   +||+..-+.+++||+.|+++|+
T Consensus       316 P-I~P~~~G~~~~a--------l---~~a~~L~~~G~~v~AIRPPTVP~G~sRLR~Tl~A~Ht~~di~~L~~~l~  378 (378)
T TIGR00858       316 P-IVPVIIGDEESA--------L---ALAEELQEQGIFVGAIRPPTVPKGTSRLRLTLSAAHTEGDIDRLLEALK  378 (378)
T ss_pred             C-CEEEEECCCHHH--------H---HHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCC
T ss_conf             6-258870892899--------9---9999998779479102588887796104557740489889999999739


No 47 
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.43  E-value=1.3e-09  Score=80.55  Aligned_cols=318  Identities=16%  Similarity=0.086  Sum_probs=193.8

Q ss_pred             CCCCC----CCCCCCHHHHHHHHHHHCC--CCCCC-C---HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf             88688----8776896899998632103--65328-9---8899999999999999968899857999748734899987
Q gi|254780153|r   14 PFFSS----GPCAKRPGWSLGILEGALL--GRSHR-C---VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA   83 (391)
Q Consensus        14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~sHR-s---~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~   83 (391)
                      .||++    |=+. +|+ |.+++.+.+-  |.+-- |   .=...++.+..+.|.++++.++   ++++ .||-.+.-++
T Consensus        48 ~~FsSNdYLGLs~-~p~-v~~a~~~a~~~~G~gs~gSrl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~  121 (406)
T PRK09064         48 TVWCSNDYLGMGQ-HPK-VIEAMHEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA---ALVF-TSGYVSNDAT  121 (406)
T ss_pred             EEEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH
T ss_conf             9846544357779-999-99999999998489987777040587999999999999858885---8997-7417888999


Q ss_pred             HHHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEE---CC
Q ss_conf             5320578--9707997073688888765323876306740577765786767----8556579974202420220---32
Q gi|254780153|r   84 LWSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCV---PD  154 (391)
Q Consensus        84 ~~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~---~~  154 (391)
                      +..|.+.  ++.++..  ....--.-+..+..+..+..  .......+++..    +..... ++-.|..-.+..   |+
T Consensus       122 i~aL~~~~p~~~i~~D--~l~HASiidG~rls~a~~~~--f~HND~~~Le~~L~~~~~~~~~-iIvtEgVfSMdGDiapL  196 (406)
T PRK09064        122 LSTLAKLIPGCVIFSD--ELNHASMIEGIRRSGAEKHI--FRHNDVAHLEELLAAADPDRPK-LIAFESVYSMDGDIAPI  196 (406)
T ss_pred             HHHHHCCCCCCEEEEE--CCCCHHHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHCCCCCCE-EEEEEECCCCCCCCCCH
T ss_conf             9998567999689981--42332489998755995899--4799989999999837778970-99997000167876579


Q ss_pred             EE--EECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf             03--502568614886401101102---------545-568579997001200176651544567788876541144577
Q gi|254780153|r  155 VG--FIPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       155 ~~--~~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~  222 (391)
                      .+  .+++++++.++||=.=++|..         .+. .+++|++..+-.|+||+-.|  +|+.|+..++-...... . 
T Consensus       197 ~~l~~l~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~g~~~~vdi~~gTfsKA~Gs~Gg--fv~gs~~~id~L~~~ar-~-  272 (406)
T PRK09064        197 AEICDLADKYNAMTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMGG--YIAGSASLIDAVRSYAP-G-  272 (406)
T ss_pred             HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCE--EECCCHHHHHHHHHHCC-C-
T ss_conf             9999999860959999622102203688877398729866670799216652357750--43178899999987185-3-


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                        .               -.+|.  +|-..+.+...+++.+.++   +.+.++-+++.+.+++.+...++ .. .   ..
T Consensus       273 --~---------------IfSta--lpp~~~aa~~~al~~l~~~---~~~r~~L~~n~~~~r~~l~~~G~-~~-~---~s  325 (406)
T PRK09064        273 --F---------------IFTTS--LPPAIAAAALASIRHLKES---NEERERHQERAAKLKASLDAAGI-PV-M---PN  325 (406)
T ss_pred             --C---------------CCCCC--CCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC-C---CC
T ss_conf             --0---------------02678--9999999999999998709---07789999999999986774499-74-7---99


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             3653178982473101137345678889999988862-828726655676750---568615888999999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      .|+ ++++.+.++.           ....+...|.++ |+.+..-.|+.++++   +||++....+.+||+.|+++|+.+
T Consensus       326 ~sp-Iipi~ig~~~-----------~~~~~~~~Ll~~~Gi~v~~I~~PtVP~g~~rLRi~l~a~ht~edid~l~~~L~ev  393 (406)
T PRK09064        326 PSH-IVPVIVGDPE-----------KCKKASDRLLEEHGIYVQPINYPTVPRGTERLRITPTPLHTDEMIDHLVEALVEV  393 (406)
T ss_pred             CCC-EEEEEECCHH-----------HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             998-7999959999-----------9999999999868987810889988999846998868669999999999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999998
Q gi|254780153|r  379 FYFQKIS  385 (391)
Q Consensus       379 ~~~~k~~  385 (391)
                      .++...+
T Consensus       394 ~~~~g~~  400 (406)
T PRK09064        394 WARLGLP  400 (406)
T ss_pred             HHHCCCC
T ss_conf             9980998


No 48 
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.43  E-value=1.8e-09  Score=79.59  Aligned_cols=311  Identities=13%  Similarity=0.039  Sum_probs=182.8

Q ss_pred             CCCCCC----CCCCCCHHHHHHHHHHHCC-----------CC-CCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             888688----8776896899998632103-----------65-3289-88999999999999999688998579997487
Q gi|254780153|r   13 RPFFSS----GPCAKRPGWSLGILEGALL-----------GR-SHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPAS   75 (391)
Q Consensus        13 ~~~F~p----GP~~~~p~~v~~~~~~~~l-----------~~-sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~Gs   75 (391)
                      -.||++    |=+. +|+ +.+++...+-           |. +-|- .=...++.++.+.|.++++.++   ++++ +|
T Consensus         6 ~lnFsSNDYLGLs~-~p~-v~~a~~~a~~~y~~~~~~~g~Gs~gSrl~~G~~~~h~~LE~~lA~f~g~e~---allf-~s   79 (370)
T PRK05937          6 SIDFVTNDFLGFSR-STT-LVHEVEKRYRLYCEQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---AFIV-PS   79 (370)
T ss_pred             EEECCCCCCCCCCC-CHH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CC
T ss_conf             78240320038789-989-999999999987312578987686878262786999999999999869993---9998-76


Q ss_pred             CHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----C-CCCCEEEEEEECCCCE
Q ss_conf             3489998753205789707997073688888765323876306740577765786767----8-5565799742024202
Q gi|254780153|r   76 DTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----D-FDRDVVFVWNGTTSGV  150 (391)
Q Consensus        76 gT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~v~~~h~ETstGv  150 (391)
                      |..+.-+++..|+++++.++..-....  -..+..+..+..+..  .......+++..    . ....-.++-.|..-.+
T Consensus        80 Gy~AN~~~i~al~~~~d~i~~D~l~Ha--Si~dG~rls~a~~~~--f~Hnd~~~Le~~L~~~~~~~~~~~~iv~egVfSM  155 (370)
T PRK05937         80 GYMANLGLCAHLSSVTDYVLWDEQVHI--SVVYSLSVISGKHQS--FRHNDLDHLESLLESCRAVSFGRIFIFVCSVYSF  155 (370)
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCHH--HHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf             688999999960899998999630619--999999864998699--6899989999999853311788559999405667


Q ss_pred             ---EECCEEE--ECCCCCCEEEEEECCHHHHC---------CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHH
Q ss_conf             ---2032035--02568614886401101102---------545568579997001200176651544567788876541
Q gi|254780153|r  151 ---CVPDVGF--IPESREGLVICDATSAVFAR---------HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEK  216 (391)
Q Consensus       151 ---~~~~~~~--~~~~~~~llivD~vSs~g~~---------p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~  216 (391)
                         .-|..++  +++++++.++||=.=++|.+         .+..++++.+...--|+||+-.  ++++.+++..+-...
T Consensus       156 dGdiapL~~l~~l~~~y~a~l~vDeAH~~Gv~G~~GrG~~e~~g~~~~~~i~~TlsKAlGs~G--gfv~~s~~~i~~l~~  233 (370)
T PRK05937        156 KGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--AALLSSSEVKQDLML  233 (370)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCCCCCCCHHHHCCCCCCCEEEEEHHHHHHHCC--EEEECCHHHHHHHHH
T ss_conf             787558999999999819789973300004337999757887399887789813256621065--389828899999998


Q ss_pred             CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r  217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL  296 (391)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~  296 (391)
                      .  .++  ..               .+|  .+|-..+.+...+++.+.+++  +...++..++.+.+++.+..       
T Consensus       234 ~--ar~--~I---------------fSt--alpP~~~aa~~~al~~l~~e~--~~~r~~l~~~~~~~~~~~~~-------  283 (370)
T PRK05937        234 N--SPP--LR---------------YST--GLPPHALISIQVAYDFLSQEG--ELARKQLFRLKEYFAQKFSS-------  283 (370)
T ss_pred             H--CCC--CC---------------CCC--CCCHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHCCC-------
T ss_conf             3--964--00---------------367--558999999999999998595--99999999999999985066-------


Q ss_pred             CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             68820036531789824731011373456788899999888628287266556767505686158889999999999999
Q gi|254780153|r  297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                          ...+. ++++.+++.            ....+...|.++|+.+..-.|+.+++ +||......+.+||+.|+++|.
T Consensus       284 ----~~~~~-i~pI~~~~~------------~~~~~~~~L~~~Gi~v~~Ir~PtVPr-LRi~l~A~HT~edId~Lv~~L~  345 (370)
T PRK05937        284 ----AAPGC-VQPIFLPDI------------SEQELYSKLVETGIRVGVVCFPTKPF-LRVNLHAFNTEDEVDILVSVLH  345 (370)
T ss_pred             ----CCCCC-EEEEEECCH------------HHHHHHHHHHHCCEEEEEECCCCCCE-EEEECCCCCCHHHHHHHHHHHH
T ss_conf             ----78997-488980838------------99999999997897798689899883-7886186669999999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780153|r  377 WVFYFQK  383 (391)
Q Consensus       377 ~~~~~~k  383 (391)
                      .++++..
T Consensus       346 ~~~~~~~  352 (370)
T PRK05937        346 SYLEKCQ  352 (370)
T ss_pred             HHHHHHH
T ss_conf             9999986


No 49 
>PRK07310 consensus
Probab=99.43  E-value=1.1e-09  Score=80.86  Aligned_cols=321  Identities=10%  Similarity=0.032  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             6899998632103----653289889999999999999996889985799974873489998753205789707997073
Q gi|254780153|r   25 PGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES  100 (391)
Q Consensus        25 p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~  100 (391)
                      |..+++++...+-    +.+-.+.-..++-+.+.+.+++-++..=+-+=++++.|++.++..++..++.+||.+++-.=.
T Consensus        45 p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lR~Aia~~~~~~~g~~v~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~  124 (395)
T PRK07310         45 PKNIQDAAIESIENGRASFYTVASGLPELKAAIATYFENFYGYHLSPNQIVVGTGAKFILYAFFMAVLNPGDEVIIPTPY  124 (395)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf             99999999999828988878997473999999999989987899883209987788999999999974999989983787


Q ss_pred             HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEE
Q ss_conf             68888876532387630674-05777657867678-----55657997420242022032035-----025686148864
Q gi|254780153|r  101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICD  169 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD  169 (391)
                      |..- ...+...++..+.+. ..+.+...++++++     ..+.+.+++=..-||...+..+.     +|..++.++|.|
T Consensus       125 Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a~~~~i~visD  203 (395)
T PRK07310        125 WVSY-SDQVKMAEGVPVFVQAKEENHFKVTVEQLEAARTSKTKVVLLNSPSNPTGMIYSAEELRAIGEWAVEHDILILAD  203 (395)
T ss_pred             CCCH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEC
T ss_conf             7546-999997599899975674457450499999746589749998999798562663541467765565268799943


Q ss_pred             ECCH---HHHC---CC-----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             0110---1102---54-----556857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r  170 ATSA---VFAR---HI-----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       170 ~vSs---~g~~---p~-----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      -+=+   +.+.   |+     +..+--+++.|.-|.++ -||  +|.++..++.+++.....                  
T Consensus       204 EiY~~l~~~g~~~~p~~~~~~~~~~~~i~~~s~SK~f~-~~G~RiG~~v~~~~~i~~~~~~~------------------  264 (395)
T PRK07310        204 DIYGRLVYNGNQFTPISSLSEAIRKQTIVINGVSKTYA-MTGWRVGFAVGEPEIISAMSKIA------------------  264 (395)
T ss_pred             CCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCC-CCCCEEEEEECCHHHHHHHHHHH------------------
T ss_conf             65210014898888888841243257358840123567-76654899977999999999998------------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                           .++...++...-++...++..-.  .-++.+.+.++++.+.+++.+...+++....++-.+.    +-..++.. 
T Consensus       265 -----~~~~~~~~~~~q~aa~~al~~~~--~~~~~~~~~~~~r~~~~~~~l~~~~g~~~~~P~g~~~----~w~~~~~~-  332 (395)
T PRK07310        265 -----GQTTSNLTAVSQYAAIEAFTGSQ--SSVEEMRLAFEERLNIIYPLLAQVPGFEVVKPQGAFY----LFPNVKKA-  332 (395)
T ss_pred             -----HHHCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEE----EEEECCCH-
T ss_conf             -----65047813899999999996888--9999999999999999999873089968726986689----81666511-


Q ss_pred             CCCCCHHHHHHHHHHHHHH-HHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             0113734567888999998-886282872665567675056861588899999999999999999999
Q gi|254780153|r  317 IASLDINSQKSFCKSMLSF-LEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      ........    ..++... +.+.|+++--|..=..+..+|++..  .+++.++.-++-|+.+++.-|
T Consensus       333 ~~~~g~~d----~~~~~~~ll~~~gV~v~PG~~FG~~~~vRl~~a--~~~~~l~eal~RL~~~l~s~~  394 (395)
T PRK07310        333 MEMKGYTD----VTDFTTAILEEVGVALVTGAGFGAPENVRLSYA--TDLETLKEAVRRLHVFMESNE  394 (395)
T ss_pred             HCCCCCCC----HHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf             12478898----999999999849999988976699998899980--999999999999999998777


No 50 
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.42  E-value=3e-10  Score=84.53  Aligned_cols=287  Identities=16%  Similarity=0.182  Sum_probs=170.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..|-+..    -.+..+||-.|+.+++++++++|+.+++....||.-  +........+..++..
T Consensus        62 ~nPT~~~lE~~l---a~LEg~~----~a~~~~SGmaAis~~l~~ll~~Gd~vv~~~~~YggT~~l~~~~l~~~Gi~v~fv  134 (398)
T PRK08249         62 TNPTVQALEAKV---KELEGAE----AATSFSTGMAAISNTLYTFLSPGDRVVSIKDTYGGTNKIFEEFLPRMGVDVTLC  134 (398)
T ss_pred             CCHHHHHHHHHH---HHHHCCC----EEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf             886599999999---9982997----089964789999999999718999899818984379999997601598699987


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCE-----EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--56579974202420220320-----3502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDV-----GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~-----~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.++++.  .+...+++.||.+--.+.+.     ..+++++++++|||-+  +-+...|++. ++|+++-|.
T Consensus       135 d~~-----d~~~~~~ai~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~  208 (398)
T PRK08249        135 ETG-----DHEQIEREIAKGCDLLYLETPTNPTLKITDIRRLSAAAHEVGALVVVDNTFATPINQNPLAL-GADLVVHSA  208 (398)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCC-CCCEEEECC
T ss_conf             999-----86999985588861899844899974666479999999874996998477420312782115-798799726


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-++|-+-+  ++++.+++.++++..            +.   +     ..|.   +++-+.-|.+...|      ..+
T Consensus       209 TKyi~GHsDvlgGvv~~~~~~~~~l~~------------~~---~-----~~G~---~lsP~~a~L~~RGL------~TL  259 (398)
T PRK08249        209 TKFLGGHADALGGVVCGPEALMAQVYH------------YR---E-----INGA---TLDPFAAYLILRGM------KTL  259 (398)
T ss_pred             CCEECCCCCEEEEEECCCHHHHHHHHH------------HH---H-----HCCC---CCCCHHHHHHHCCC------CCH
T ss_conf             620036876351056088999999999------------99---7-----0488---78917789986468------979


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      .-|.+||.+++..+-+|+++++.....     ...|.+        .....+.|.+.+..      +.    .+.+...|
T Consensus       260 ~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~g~~------~~----~~~f~~~l  329 (398)
T PRK08249        260 ALRVRQQQENAMALAEYLQTEPLVEAVNYPGLPTHPNHAIAKAQMRGFGGMLSFALKGGM------DT----VRRLLPRL  329 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCH------HH----HHHHHHHC
T ss_conf             999999988999999999839980779899999996889999867999971179981899------99----99999718


Q ss_pred             HHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             862828726655676----------------------75-05686158889999999999999999999998
Q gi|254780153|r  337 EKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       337 ~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      .--..+..+|+.++.                      .. -+|++++    .||++.|++-|+.||...|.+
T Consensus       330 ~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~~DLi~DL~qAL~~ir~~  397 (398)
T PRK08249        330 QYAHRAANLGAVETIVGPARTTSHVENTPEERAALGIPEGLVRISVG----IEDTEDLIADLAQAFASVREE  397 (398)
T ss_pred             CCCEECCCCCCCCCEEECHHHCCCCCCCHHHHHHCCCCCCEEEEEEE----CCCHHHHHHHHHHHHHHHHHH
T ss_conf             80500556387661202813247634999999976989394999960----099999999999999998855


No 51 
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.42  E-value=3.2e-09  Score=77.99  Aligned_cols=315  Identities=18%  Similarity=0.144  Sum_probs=191.0

Q ss_pred             CCCCC----CCCCCCHHHHHHHHHHHCC--CCC---CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf             88688----8776896899998632103--653---289-8899999999999999968899857999748734899987
Q gi|254780153|r   14 PFFSS----GPCAKRPGWSLGILEGALL--GRS---HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA   83 (391)
Q Consensus        14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~s---HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~   83 (391)
                      .||++    |=+. +|+ |.+++.+.+-  |.+   -|- .=..+++.+..+.|.++++.++   ++++ .||-.++-++
T Consensus        49 l~f~SNdYLGLs~-~p~-v~~a~~~a~~~yG~gs~gSrl~~G~~~~h~~LE~~LA~f~g~e~---allf-~SGy~AN~g~  122 (410)
T PRK13392         49 TIWCSNDYLGMGQ-HPD-VIGAMVDALDRYGAGAGGTRNISGTSHEHVLLERELADLHGKQS---ALLF-TSGYVSNDAA  122 (410)
T ss_pred             EEEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH
T ss_conf             8977566657789-999-99999999998099987758562787999999999999869992---9997-6647888999


Q ss_pred             HHHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECC---CCEEECC
Q ss_conf             5320578--9707997073688888765323876306740577765786767----85565799742024---2022032
Q gi|254780153|r   84 LWSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTT---SGVCVPD  154 (391)
Q Consensus        84 ~~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETs---tGv~~~~  154 (391)
                      +..|.+.  ++.++.  ......-.-+..+..+..+..  .......+++..    +.... .++-.|..   .|-.-|.
T Consensus       123 i~aL~~~~~~d~i~~--D~l~HaSiidG~rlS~a~~~~--f~HnD~~~Le~~L~~~~~~~~-~~IvtEgVfSMdGd~apL  197 (410)
T PRK13392        123 LSTLARLLPNCLILS--DALNHASMIEGIRRSGAEKQV--WAHNDLADLERQLASVDPDRP-KLICFESCYSMDGDFAPM  197 (410)
T ss_pred             HHHHHCCCCCCEEEE--CCCCCHHHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCCCCH
T ss_conf             999827799979998--731228899878755895899--718998999999975666785-599972531247886899


Q ss_pred             EE--EECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf             03--502568614886401101102---------545-568579997001200176651544567788876541144577
Q gi|254780153|r  155 VG--FIPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       155 ~~--~~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~  222 (391)
                      .+  .+++++++.++||=.=++|..         .+. ..++|++..+-.|+||+-.|  +|+.|++.++-.....    
T Consensus       198 ~~l~~L~~~y~a~L~VDeAH~~GvlG~~GrG~~e~~g~~~~vdi~~gTlsKA~Gs~Gg--fv~gs~~~id~l~~~a----  271 (410)
T PRK13392        198 AAICDLAEKYNAFTYVDEVHAVGLYGPRGGGIAERDGLMDRIDMFQGTLSKAFGCLGG--YIAASADLVDFVRSFA----  271 (410)
T ss_pred             HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCE--EEECCHHHHHHHHHHC----
T ss_conf             9999999984959996131002413589987799728987667998506541236760--3423737789998738----


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             8312320011232103347864466-644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINT-PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~T-P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                        +...+.| .|-..+.+...+|+.+.++   +...++..++...+++.+...++ ...   + 
T Consensus       272 ------------------r~~IfStalpP~~~aa~~~al~~l~~~---~~~r~~L~~~~~~lr~~l~~~g~-~~~---~-  325 (410)
T PRK13392        272 ------------------PGFIFTTALPPPVVAGARAALRHLKTS---QWERDAHQDRTASLKAKLNANGI-PVL---P-  325 (410)
T ss_pred             ------------------CCCCCCCCCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CCC---C-
T ss_conf             ------------------754366678999999999999998719---58899999999999999986799-848---9-


Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             03653178982473101137345678889999988-862828726655676750---56861588899999999999999
Q gi|254780153|r  302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                      ..|+ ++++.+.++..           ...+...| .+.|+.+..-.|+.++++   +||+.....+++||+.|+++|..
T Consensus       326 s~s~-Iipi~ig~~~~-----------a~~~~~~ll~e~Gi~v~~i~~PtVP~g~~rLRi~lsA~Ht~~dId~l~~~L~~  393 (410)
T PRK13392        326 SPSH-IVPVMVGDPEK-----------CKAISDLLMAEHGIYIQPINYPTVPRGTERLRITPSPLHTDEDIDALVAALVA  393 (410)
T ss_pred             CCCC-EEEEEECCHHH-----------HHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             9998-79999799999-----------99999999875998998678883799974498775866899999999999999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780153|r  378 VFYFQK  383 (391)
Q Consensus       378 ~~~~~k  383 (391)
                      +..+..
T Consensus       394 v~~e~g  399 (410)
T PRK13392        394 IWRELA  399 (410)
T ss_pred             HHHHCC
T ss_conf             999809


No 52 
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.42  E-value=1.6e-10  Score=86.21  Aligned_cols=294  Identities=11%  Similarity=0.044  Sum_probs=180.2

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEEC----CC
Q ss_conf             999999999996889985799974873489998753205789707997-0736888887653238763067405----77
Q gi|254780153|r   50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTA----PY  124 (391)
Q Consensus        50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~----~~  124 (391)
                      +.+-.+.+.++++.-    .+++..|+|.++-|+++.+.++||.+++. +.+++.--+.+.+   +..+..+..    .+
T Consensus        64 i~~f~~~la~flg~D----~~rlvnGar~g~qAv~~a~c~~GD~VIl~rnaHyS~~~A~ela---G~~~~~v~~~~~~~~  136 (386)
T PRK09331         64 IADFHEDLAKFLGMD----EARVTPGAREGKFAVMHALCKKGDYVVLDGLAHYTSYVAAERA---GLNVREVPKTGYPDY  136 (386)
T ss_pred             HHHHHHHHHHHHCCC----EEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHC---CCEEEEECCCCCCCC
T ss_conf             899999999984996----3785288427899999986369997984484059999999975---985899368777234


Q ss_pred             CCCCC--HHHC-------CCCCCE-EEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEEC
Q ss_conf             76578--6767-------855657-997420242022032035--0256861488640110110254556--85799970
Q gi|254780153|r  125 GSLPD--FSKV-------DFDRDV-VFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFS  190 (391)
Q Consensus       125 g~~~~--~~~~-------~~~~~v-~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~  190 (391)
                      +..+.  .+.+       ...+.+ .++|.+=+-|...+...+  +||.++.++++|+.=+.+-+|++..  +.|+++.|
T Consensus       137 ~I~~~~~~~~Iee~~~e~gk~~aL~llt~pdy~yGn~~d~~~i~~iah~~~ip~lvdeA~~~~~~P~~a~~~GaD~~v~S  216 (386)
T PRK09331        137 RITPEAYAEKIEEVEDETGKPPALALLTHVDGNYGNLHDAKKIAKVAHQYGIPLLLNGAYTVGRMPVDGKELGADFIVGS  216 (386)
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCEEEEE
T ss_conf             50800579999999986189855999968886644546389999999874981898144335778974666399889863


Q ss_pred             CHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             01200176651544567788876541144577831232001123210334786446-66448899999999862010318
Q gi|254780153|r  191 AQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETIN-TPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       191 sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      .+|-++.+.-.|++.++.+..++.-...+.. .-+..           ..-+.|-- -|...++.-+..+-+++      
T Consensus       217 ~HK~~~s~t~sgvL~~~~e~~d~v~R~s~~~-~~Kev-----------~mLgcTs~g~psy~LMASfd~vrerv------  278 (386)
T PRK09331        217 GHKSMAASAPSGVLATTEEYADKVFRTSKKF-GVKEV-----------ELLGCTLRGAPLVTLMASFPHVKERV------  278 (386)
T ss_pred             CCCCCCCCCCCEEEECCCCHHHHHHHCCCCC-HHHHH-----------HHHCCCCCCCHHHHHHHCCHHHHHHH------
T ss_conf             4544423463124430453015565226430-57899-----------88536334640899980659999999------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCC
Q ss_conf             99999999779999999874797167668820036531789824731011373456788899999888628287266556
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYR  349 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r  349 (391)
                       +.|...-++++.+++.+.+..+++.+-..|.  ....+.|  ..+.++.....+.... -.+...|.+.|+..-..+  
T Consensus       279 -~~~d~ev~~ar~~~~El~kIeG~~~lge~P~--~hdl~~f--dtt~~~~ia~~~~~~G-y~l~~~Lk~r~I~ge~sg--  350 (386)
T PRK09331        279 -KNWDEEVEKARWFVDELEKIEGFKQLGEKPR--NHDLMRF--ETPSFDEIAKKHKRRG-FFLYEELKKRGIHGIKPG--  350 (386)
T ss_pred             -HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC--CCCCEEE--CCCCEEEEHHHCCCCC-EEHHHHHHHCCCEEEECC--
T ss_conf             -8778999999999999860876554065778--7774353--3764122232048660-567999976796499557--


Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             76750568615888999999999999999
Q gi|254780153|r  350 DAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       350 ~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                       .-+.|-++.+|. +.|+++.|++|+..-
T Consensus       351 -~t~~lkl~s~G~-t~E~v~~li~A~keI  377 (386)
T PRK09331        351 -LTKEFKLSTYGL-TWEQVEYVADSFKEI  377 (386)
T ss_pred             -CCEEEEEEECCC-CHHHHHHHHHHHHHH
T ss_conf             -101787886178-789999999999999


No 53 
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.42  E-value=4.2e-10  Score=83.58  Aligned_cols=290  Identities=15%  Similarity=0.119  Sum_probs=173.8

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEEE
Q ss_conf             8899999999999999968899857999748734899987532057897079970736888--88765323876306740
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREFT  121 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~~  121 (391)
                      .+-.+.+++   .|..|=+...   + +..+||-+|..+++++++++||.+++...-||.-  .+....+.++..+...+
T Consensus        59 NPT~~~lE~---~lA~LEgg~~---a-~~~sSGmaAi~~~l~~ll~~GDhiv~~~~~YGgT~~l~~~~~~~~gi~~~~vd  131 (405)
T PRK08776         59 NPTRDLLGE---ALAELEGGAG---G-VITSTGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITAD  131 (405)
T ss_pred             CHHHHHHHH---HHHHHHCCCC---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEC
T ss_conf             878999999---9999829996---8-99467999999999997389998998688611799999998754888999968


Q ss_pred             CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCE---E--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf             57776578676785--56579974202420220320---3--502568614886401--101102545568579997001
Q gi|254780153|r  122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDV---G--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ  192 (391)
Q Consensus       122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~---~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ  192 (391)
                      ..     +++.++.  .+..-+++.||.+--...+.   .  .+++.+++++|||-+  |-+...|++. ++|+++-|.-
T Consensus       132 ~~-----d~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivihS~T  205 (405)
T PRK08776        132 LT-----DPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEF-GADLVLHSTT  205 (405)
T ss_pred             CC-----CHHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEECC
T ss_conf             99-----98999974377765999988999988602759999999873997999799764002682652-7978999726


Q ss_pred             HCCCCCCCC--EEEEECHHHHH-HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             200176651--54456778887-654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  193 KVLGGEAGF--GIIILSPASVE-RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       193 K~l~~ppGl--~~v~~s~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      |-|+|-..+  |.|+.++..+. +..            .+..        ..|.   +++-+.-|.+...|      ..+
T Consensus       206 Kyl~GHsDvl~G~vv~~~~~~~~~l~------------~~~~--------~~G~---~~sP~da~L~lRGL------kTL  256 (405)
T PRK08776        206 KYINGHSDVVGGAVVARDAALHQQLV------------WWAN--------ALGL---TGSPFDAFLTLRGL------RTL  256 (405)
T ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHH------------HHHH--------HCCC---CCCCHHHHHHHCCC------CCH
T ss_conf             04327865305622268889999999------------9998--------6088---88833578886457------889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--------------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999779999999874797167668820--------------0365317898247310113734567888999998
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDET--------------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~--------------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      .-|.+||.+++..+-+|+++++..... ..|.              ...-..++|.+.+..          ...+.+...
T Consensus       257 ~lRm~r~~~nA~~lA~~L~~hp~V~~V-~YPgL~shp~h~la~r~~~G~Ggm~Sf~l~~~~----------~~~~~f~d~  325 (405)
T PRK08776        257 DARLRVHQENADAIAALLDGHAAVNQV-YFPGLASHPGHALAARQQKGFGAMLSFELEGGE----------AAVRAFVDG  325 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCCCHHHHHHCCCCCCCEEEEEECCHH----------HHHHHHHHH
T ss_conf             999999999999999999709896868-898888981678998648998652688845739----------999999980


Q ss_pred             HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             8862828726655676----------------------75-0568615888999999999999999999999877511
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLRAI  390 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~~~  390 (391)
                      |.--..+..+|+.++.                      .. -+|+++|    .||++.|++-|+.||++.++..+-++
T Consensus       326 l~lf~~a~SlGg~eSLi~~P~~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~~DLi~DL~qAL~~a~a~~~~~~  399 (405)
T PRK08776        326 LRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVG----IESAEDLLIDLRAGLARAEAVLTAAA  399 (405)
T ss_pred             CCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----CCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             883625215376541302775446645899999866989396999950----09999999999999999998875430


No 54 
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.41  E-value=1.8e-09  Score=79.55  Aligned_cols=297  Identities=19%  Similarity=0.157  Sum_probs=178.7

Q ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH
Q ss_conf             89999863210365328988999999999999999688998579997487348999875320578970799707368888
Q gi|254780153|r   26 GWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW  105 (391)
Q Consensus        26 ~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~  105 (391)
                      ..|++++...+-. -||=|+-..  .+.++.+.+.++++.+ .|++ +.|++.++..++..++.+|+.+++..=+|+.. 
T Consensus        48 ~~v~~ai~~~~~~-~~~YPd~~~--~~Lr~aiA~~~~v~~~-~Ilv-~nGs~e~i~l~~~a~~~pgd~Vl~~~P~f~~Y-  121 (367)
T PRK02731         48 PKAIEAIRAAADE-LHRYPDGSG--FELKAALAEKFGVDPE-QIIL-GNGSDEILELLARAYLGPGDEVIYSEHAFAVY-  121 (367)
T ss_pred             HHHHHHHHHHHHH-HCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCCHHHH-
T ss_conf             9999999987755-115959878--9999999999785811-1998-57899999999999847998644479862689-


Q ss_pred             HHHHHHCCCCCEEEEECCCCCCCCHHHC----C-CCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-HH
Q ss_conf             8765323876306740577765786767----8-55657997420242022032035---025-6861488640110-11
Q gi|254780153|r  106 MSDIRQLSLQDVREFTAPYGSLPDFSKV----D-FDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA-VF  175 (391)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs-~g  175 (391)
                       ..+++..+..+..+... +...+++.+    . ..+.+.++.=..-||...+..+.   +.. ..+.++|+|-+=. |.
T Consensus       122 -~~~a~~~G~~~~~vp~~-~~~~d~~~l~~~i~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vviDEaY~ef~  199 (367)
T PRK02731        122 -PIAAQAVGAKPVEVPAK-DYGHDLDAMLAAVTPRTKLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYV  199 (367)
T ss_pred             -HHHHHHCCCEEEEECCC-CCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHC
T ss_conf             -99999829889995476-7765968999855878868998289999886575699999998545576388411267642


Q ss_pred             HCC-----CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCC
Q ss_conf             025-----45-56857--9997001200176651--54456778887654114457783123200112321033478644
Q gi|254780153|r  176 ARH-----ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETI  245 (391)
Q Consensus       176 ~~p-----~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (391)
                      ..+     ++ ..+.+  ++.-+.-|.++. ||+  |.++.+++.++.+.+.+.                         +
T Consensus       200 ~~~~~~~~~~l~~~~~n~iv~rSfSK~~gl-aGlRlGy~ia~~~~i~~l~~~~~-------------------------p  253 (367)
T PRK02731        200 ARKDYEDGIELVKEFPNVVVTRTFSKAYGL-AGLRVGYGIAPPEIIDALNRVRQ-------------------------P  253 (367)
T ss_pred             CCCCCCCHHHHHHHCCCEEEEEECCHHHCC-CCCCEEEEECCHHHHHHHHHHHC-------------------------C
T ss_conf             576665589997623764799746666516-88705888669999999999847-------------------------6


Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHH
Q ss_conf             6664488999999998620103189999999977999999987479716766882003653178-982473101137345
Q gi|254780153|r  246 NTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINS  324 (391)
Q Consensus       246 ~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~  324 (391)
                      ++-++....+...+|+   ++.-++...+..++..+.+++.++..+ +..+.      |.++.. ++++++.        
T Consensus       254 ~~v~~~aq~aa~aaL~---d~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p------s~~nFil~~~~~~~--------  315 (367)
T PRK02731        254 FNVNSLALAAAVAALD---DDAFVEKSRELNAKGMARLEEFLAELG-LEYIP------SYGNFILVDFDDGK--------  315 (367)
T ss_pred             CCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC------CCCEEEEEECCCCC--------
T ss_conf             6588999999999966---999999999999999999999999784-98878------98618999889999--------


Q ss_pred             HHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             67888999998886282872665-5676750568615888999999999999999999
Q gi|254780153|r  325 QKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       325 ~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                         ....+...|.++|+++.-+. +. ....+||+.+   ++++.++|+++|+..+.+
T Consensus       316 ---~a~~~~~~L~~~gI~vr~~~~fg-l~~~~Risig---t~een~~li~al~~~l~e  366 (367)
T PRK02731        316 ---DAAAIYEALLKRGVIVRPLAGYG-LPNALRITIG---TPEENRRFLAALKEFLAQ  366 (367)
T ss_pred             ---CHHHHHHHHHHCCEEEEECCCCC-CCCEEEEEEC---CHHHHHHHHHHHHHHHHH
T ss_conf             ---99999999996893898588889-9896999928---999999999999999850


No 55 
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.41  E-value=4.2e-10  Score=83.63  Aligned_cols=287  Identities=14%  Similarity=0.099  Sum_probs=173.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..|=+..   .+ +..+||-+|+.+++++++++|+.+++...-||.-  .++......+.+++..
T Consensus        59 ~NPT~~~lE~~l---a~LEgg~---~a-~~~~SGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~v  131 (394)
T PRK09028         59 GTPTHFAFQAAI---AELEGGA---GT-ALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILAGFGIETTYY  131 (394)
T ss_pred             CCHHHHHHHHHH---HHHHCCC---CE-EEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf             887799999999---9981998---77-9845999999999999847998787069986277999998886567479995


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.+.++.  .+...+++.||.+--.+.+..     .+++++++++|||-+  +-+...|++. ++|+++-|.
T Consensus       132 d~~-----~~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~  205 (394)
T PRK09028        132 DPM-----IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEM-GVDISIQAA  205 (394)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHCCCCHHC-CCCEEEEEC
T ss_conf             799-----98999853687726999955899875236899999999983987996376431220682120-798899827


Q ss_pred             HHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             120017665--154456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-|+|-+-  .|.++.+++.+++.....               .     ..|.   +++-+..|.+...|      ..+
T Consensus       206 TKyi~GHsDv~~G~v~~~~~~~~~l~~~~---------------~-----~~G~---~~sP~~a~L~lRGL------~TL  256 (394)
T PRK09028        206 TKYIVGHSDVMLGTATANEKHWDQLREQS---------------Y-----LMGQ---CTSPDDVYLAARGL------RTL  256 (394)
T ss_pred             CCEECCCCCCCCEEEECCHHHHHHHHHHH---------------H-----HHCC---CCCHHHHHHHHHCC------CCH
T ss_conf             70104887740316746889999999999---------------8-----7167---78878999998367------859


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676688200--------------365317898247310113734567888999998
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      .-|.+||.+++..+-+|+++++..... ..|..              -....+.|.+++...     +    ..+.+...
T Consensus       257 ~lRm~r~~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~h~la~r~~~g~gg~~sf~l~~g~~-----~----~~~~f~~~  326 (394)
T PRK09028        257 GVRLAQHEKNALKVANWLATRPEVDHL-RHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDP-----K----AVTALVEG  326 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH-----H----HHHHHHHH
T ss_conf             999999999999999998609998789-8889988944899998677998699999816999-----9----99999984


Q ss_pred             HHHCCEEECCCCCCCC------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676------------------75-05686158889999999999999999999998
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      |.--..+..+|+.++.                  .. -+|++++    .||++.|++-|+.||++..+-
T Consensus       327 L~lf~~a~SlGg~eSLi~~p~~~~~~~~~~~~~~~~~lvRlSVG----lEd~eDLi~DL~qAL~k~~a~  391 (394)
T PRK09028        327 MQHFKMGFSWGGFESLILGPFGINKLRTATNWDFSKPLIRLHIG----LEDVDDLIADLEAGFERYNAV  391 (394)
T ss_pred             CCCCEEEECCCCCCCEEECCCCCCCHHHHHCCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHHHHH
T ss_conf             88275711689875407888876742232035899997999941----099899999999999985556


No 56 
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.40  E-value=4.2e-10  Score=83.58  Aligned_cols=290  Identities=17%  Similarity=0.178  Sum_probs=175.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+-+...   + +..+||.+|+.+++++++++|+.+++...-||.  ++.+......+..++.+
T Consensus        63 ~nPT~~~lE~~l---a~LEg~~~---a-~~~sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgt~~l~~~~l~~~Gi~~~~v  135 (403)
T PRK07503         63 SNPTLALLEQRM---ASLEGGEA---G-LALASGMGAITATLWTLLRPGDEVIVGRTLYGCTFAFLHHGLGEFGVKVRHV  135 (403)
T ss_pred             CCHHHHHHHHHH---HHHHCCCE---E-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf             885699999999---99849964---8-8862789999999999659999899768875328999984463177599986


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC---EE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--5657997420242022032---03--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD---VG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~---~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +.     .+++.++.  .+...+++.||.+--...+   ..  .+++.++++++||-+  +-+...|++. ++|+++-|.
T Consensus       136 d~-----~d~~~~~~ai~~~Tkli~~Etp~NP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~  209 (403)
T PRK07503        136 DL-----TDAKALKAAISEKTRMIYFETPANPNMQLVDIAAVVEAARGHDALVVVDNTYCTPYLQRPLEL-GADLVVHSA  209 (403)
T ss_pred             CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHC-CCCEEEEEC
T ss_conf             89-----898999975186732999952799986630579999999865885998367545140161331-898899954


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-++|-+.+  |.|+.+++.+.+....          .+..        ..|.   +++-+..|.+...|      ..+
T Consensus       210 TKYi~GHsD~l~G~v~~~~~~~~~~r~~----------~~~~--------~~G~---~lsP~da~L~lRGL------~TL  262 (403)
T PRK07503        210 TKYLSGHGDITAGLVVGGKALVDRIRLE----------GLKD--------MTGA---VLSPHDASLLMRGL------KTL  262 (403)
T ss_pred             CEEECCCCCEEEEEEECCHHHHHHHHHH----------HHHH--------CCCC---CCCHHHHHHHHCCC------CCH
T ss_conf             5031378760557997261788999999----------9987--------4288---68868889986467------759


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      .-|.+||.+++..+-+|+++++.....     ...|.+        .....+.|.++...      +.    .+.+...|
T Consensus       263 ~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~q~~g~gg~~sf~l~g~~------~~----~~~f~~~L  332 (403)
T PRK07503        263 ALRMDRHCANAQQVAEFLARQPAVELVHYPGLPSFAQHALAQRQMRLPGGMIAFELKGGI------EA----GRRFMNAL  332 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------HH----HHHHHHHC
T ss_conf             999999999999999999748995589898888980189999867899836899966989------99----99999808


Q ss_pred             HHCCEEECCCCCCCCC----------------------C-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8628287266556767----------------------5-056861588899999999999999999999987
Q gi|254780153|r  337 EKEEIAYDIGSYRDAP----------------------L-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF  386 (391)
Q Consensus       337 ~~~g~~~~~~~~r~~~----------------------~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~  386 (391)
                      .--..++.+|+..+.-                      . -+|++++    .||++.|++-|+.||...|+..
T Consensus       333 ~lf~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~~DLi~DL~qAL~a~k~~~  401 (403)
T PRK07503        333 QLFARAVSLGDAESLAQHPASMTHSTYTPEERAHHGISEGLVRLSVG----LEDVEDLLADIAQALDACKVPA  401 (403)
T ss_pred             CCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHHHHHC
T ss_conf             94655316677540324763346655999999866989396999860----1899999999999999730201


No 57 
>PRK09105 putative aminotransferase; Provisional
Probab=99.40  E-value=3.4e-09  Score=77.85  Aligned_cols=294  Identities=14%  Similarity=0.144  Sum_probs=177.3

Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf             68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r   25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG  104 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r  104 (391)
                      |. +++++...+- ..||=|+  .-..+.++.|.+.++++.+ .|++. .|++..++.++.-++++|+.+++..-.|+..
T Consensus        62 p~-v~~Ai~~~~~-~~~rYPd--~~~~~Lr~~lA~~~gv~~~-~I~~g-nGSdE~i~~l~~af~~~g~~vv~~~Ptf~~Y  135 (374)
T PRK09105         62 AA-ARAAAARSAA-LSGRYLF--EMQDELRTLFAAQLGLPVD-HLHAY-AGSSEPLNYAVLAFTSPEAGLVTADPTYEAG  135 (374)
T ss_pred             HH-HHHHHHHHHH-HCCCCCC--CCHHHHHHHHHHHHCCCHH-HEEEE-CCHHHHHHHHHHHHHCCCCEEEECCCCHHHH
T ss_conf             99-9999997652-4577989--8689999999999785902-49993-6999999999999807998689588877999


Q ss_pred             HHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEE--EC--CCCCCEEEEEECC-HHH
Q ss_conf             88765323876306740577765786767----855657997420242022032035--02--5686148864011-011
Q gi|254780153|r  105 WMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGF--IP--ESREGLVICDATS-AVF  175 (391)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~--~~--~~~~~llivD~vS-s~g  175 (391)
                        ...++..+..+..+........+++.+    +..+.+.+|.=..-||...+..++  ++  ...+.++|+|-.= .|.
T Consensus       136 --~~~a~~~g~~v~~vpl~~d~~~dl~~l~~~~~~tklv~l~nPNNPTG~~~~~~el~~~~~~~~~~~lvvvDEAY~ef~  213 (374)
T PRK09105        136 --WRAADAQGAKVIKVPLRADGAHDVRAMLAADPNAGLIYICNPNNPTGSVTPRADIEWLLAHKPAGSVVLVDEAYIHFS  213 (374)
T ss_pred             --HHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHC
T ss_conf             --999998297799986165558586889735789878997889999876579999999997189881899862676625


Q ss_pred             HCC--CCC-CCC-EEEEE-CCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf             025--455-685-79997-001200176651--54456778887654114457783123200112321033478644666
Q gi|254780153|r  176 ARH--IDF-NKL-DVVTF-SAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP  248 (391)
Q Consensus       176 ~~p--~d~-~~i-Dv~~a-~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP  248 (391)
                      ..+  ++. .+. ++++. +.-|.+| -+|+  |.++.+++.++++...                          ..|..
T Consensus       214 ~~~s~~~l~~~~~NvivlRTfSKayg-LAGlRvGY~ia~~~li~~l~~~--------------------------~~~~~  266 (374)
T PRK09105        214 DAPSVVDLVAQRKDVVVLRTFSKLYG-MAGMRLGLAAARPDLLAKLARF--------------------------GGNPL  266 (374)
T ss_pred             CCCCCHHHHHCCCCEEEEEHHHHHHC-CCCCCCCHHHCCHHHHHHHHHC--------------------------CCCCC
T ss_conf             78643256742898899822237626-6510022310899999999735--------------------------88988


Q ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCCCCCCCCHHHHHH
Q ss_conf             44889999999986201031899999999779999999874797167668820036531789-82473101137345678
Q gi|254780153|r  249 SLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDSDIASLDINSQKS  327 (391)
Q Consensus       249 ~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~~~~~~~~~~~~~  327 (391)
                      ++....+...+|+   .+.-++...+...+..+.+.+++...+ +..+      -|.+|..+ .+..+            
T Consensus       267 ~~~a~aaa~aaL~---d~~~~~~~~~~~~~~R~~l~~~L~~~g-~~~~------pS~aNFil~~~~~~------------  324 (374)
T PRK09105        267 PVPAAAAGLASLR---DPKLVPQRRAQNAAVREDTIAWLRKQG-YACT------PSQANCFMVDVKRP------------  324 (374)
T ss_pred             CHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEEECCCC------------
T ss_conf             7999999999962---999999999999999999999999783-9589------98785799955999------------


Q ss_pred             HHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             88999998886282872665567675056861588899999999999999999
Q gi|254780153|r  328 FCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       328 ~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                       .+.+...|.++|++++- .+...+..+||+.+   ++++.++++++|+.+++
T Consensus       325 -a~~~~~~L~~~gIlV~r-~~~~~~~~lRISiG---t~een~~fl~AL~evL~  372 (374)
T PRK09105        325 -AEVFADAMAKQGVFIGR-SWPIWPNWVRVTVG---TEEEMAAFRSAFAKVMR  372 (374)
T ss_pred             -HHHHHHHHHHCCEEEEC-CCCCCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf             -99999999969979937-99988997999469---99999999999999866


No 58 
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.39  E-value=3.1e-09  Score=78.12  Aligned_cols=327  Identities=13%  Similarity=0.121  Sum_probs=177.3

Q ss_pred             CCCC-CCCCCCCCC---CHHHHHHHHHHHCC-CCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHH
Q ss_conf             9988-868887768---96899998632103-65328---988999999999999999688998-579997487348999
Q gi|254780153|r   11 PKRP-FFSSGPCAK---RPGWSLGILEGALL-GRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVE   81 (391)
Q Consensus        11 p~~~-~F~pGP~~~---~p~~v~~~~~~~~l-~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~e   81 (391)
                      |.+| +||-|=.-.   .|..+ ++++...+ +-+|+   +.=..++=+.+-+.+++.++++-| -+-++++.|+..++.
T Consensus        38 ~~~~id~~~G~pD~~~PtP~~i-~~~~~~~~~~g~~~Yt~~~G~~eLReAia~~~~~~~g~~~d~~d~Iivt~G~~~al~  116 (406)
T PRK06207         38 PGRPVDFSHGDVDAHEPTPGSL-ELFSQGVERGGVQAYTEYRGDLEIRELVAARLAEFTGAPVDARDGLIITPGTQGALF  116 (406)
T ss_pred             CCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH
T ss_conf             9997237889999999986999-999999973899889998672999999999999986899998786998587799999


Q ss_pred             HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE------CCCCCCCCHHHCCC-----CCCEEEEEEECCCCE
Q ss_conf             8753205789707997073688888765323876306740------57776578676785-----565799742024202
Q gi|254780153|r   82 MALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT------APYGSLPDFSKVDF-----DRDVVFVWNGTTSGV  150 (391)
Q Consensus        82 a~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv  150 (391)
                      .++.-++.+||.+++..=+|... ...+...++ .+..+.      .+.+...++++++.     .+.+.++.=..-||.
T Consensus       117 ~a~~al~~pGDeViv~~P~y~~y-~~~i~~~g~-~~vpv~l~~~~~~~~~~~~d~d~le~~i~~~tk~iil~nP~NPTG~  194 (406)
T PRK06207        117 LAVASTVTRGDKVAIVQPDYFAN-RKLVEFFEG-EIVPVQLDYVSVDETRAGLDLDQLEAAFKAGVRVFLFSNPNNPAGV  194 (406)
T ss_pred             HHHHHHCCCCCEEEEECCCCCCH-HHHHHHCCC-EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCH
T ss_conf             99999758998799978987457-999998298-7999856776776344689999999745448769998899798572


Q ss_pred             EECCEE-----EECCCCCCEEEEEECCHHH---H--------CCCCCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHH
Q ss_conf             203203-----5025686148864011011---0--------254556857999700120017665--154456778887
Q gi|254780153|r  151 CVPDVG-----FIPESREGLVICDATSAVF---A--------RHIDFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVE  212 (391)
Q Consensus       151 ~~~~~~-----~~~~~~~~llivD~vSs~g---~--------~p~d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~  212 (391)
                      ..+..+     .+|..++..+|.|-+=+-.   +        .+.+.+++ +.+.|.-|.++ .||  +|.++.++..++
T Consensus       195 v~s~e~l~~l~~la~~~~i~visDEiY~~l~ydg~~~~~~~~~~~~~~~~-I~~~s~SK~~~-m~G~RlG~~~~~~~li~  272 (406)
T PRK06207        195 VYSPEEIAQIAALARRYGATVIADQLYSRLRYAGASYTHLRALAVDPENV-ITIMGPSKTES-LSGYRLGVAFGSPAIIA  272 (406)
T ss_pred             HCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCE-EEEEECHHHHH-CCCCCEEEEECCHHHHH
T ss_conf             13399999999987557959999646645455898877876635776767-99751324431-22562488978999999


Q ss_pred             HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             65411445778312320011232103347864466644889999999986201031899999999779999999874797
Q gi|254780153|r  213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW  292 (391)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~  292 (391)
                      +....+..                      ....++ ...-.++..+++.-  ++-++.+.++++++...+.+.+...++
T Consensus       273 ~~~~~~~~----------------------~~~~~~-~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~R~~l~~~l~~~~g  327 (406)
T PRK06207        273 RMEKLQAI----------------------VSLRAA-GYCQAVLRTWFDEP--PGWMEDRIAQHQAIRDDLIRVLRGIDG  327 (406)
T ss_pred             HHHHHHHH----------------------HCCCCH-HHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999988----------------------436842-99999999999677--999999999999999999999850899


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC--CCCCCCEEEEECCCCCCHHHHH
Q ss_conf             16766882003653178982473101137345678889999988-86282872665--5676750568615888999999
Q gi|254780153|r  293 IENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS--YRDAPLGLRVWVGVTVEKEDLL  369 (391)
Q Consensus       293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~--~r~~~~~~RIg~~g~i~~~dv~  369 (391)
                      .....++-.+    -+-..+++-.   .+       ..++...| .+.|+++--|.  +...+..+|++.-  .+.+++.
T Consensus       328 ~~~~~P~gg~----yl~~~l~~~~---~~-------~~~f~~~Ll~e~gVav~PG~~FG~~~~~~vRlsfa--~~~e~l~  391 (406)
T PRK06207        328 VFARAPEAGS----YLFPRLPKLA---VG-------LADFVKILRLQAGVVVTPGTEFSPHTADSIRLNFS--QDHAAAV  391 (406)
T ss_pred             CEECCCCCEE----EEEEECCCCC---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHH
T ss_conf             5745899148----9968888889---99-------99999999985899998865658999897999973--9899999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999999
Q gi|254780153|r  370 LLCDWLRWVFYFQK  383 (391)
Q Consensus       370 ~L~~aLe~~~~~~k  383 (391)
                      .-++-|..++++.|
T Consensus       392 eal~RL~~~l~~yr  405 (406)
T PRK06207        392 AAVERIAALIERYR  405 (406)
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             99999999999855


No 59 
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.38  E-value=1.2e-09  Score=80.78  Aligned_cols=285  Identities=15%  Similarity=0.145  Sum_probs=168.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++.   |..+-+...   + ++.+||-+|+.+++++++++|+.+++...-||.  +.++......+.++...
T Consensus        50 gnPT~~~lE~~---la~LEg~~~---a-~~~~SGMaAis~~l~~~l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gi~v~~~  122 (386)
T PRK08045         50 GNPTRDVVQRA---LAELEGGAG---A-VLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV  122 (386)
T ss_pred             CCHHHHHHHHH---HHHHHCCCC---E-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf             88669999999---999809983---7-9856789999999997079999899837863489999998720795799996


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.+.++.  .....+++.||.+--...+..     .+++++++++|||-+  |-++..|++. ++|+++-|.
T Consensus       123 d~~-----d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~g~~~vvDNT~atP~~~~Pl~~-GaDivvhS~  196 (386)
T PRK08045        123 DQG-----DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLAL-GADLVLHSC  196 (386)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCHHCCCCCCC-CCCEEEEEC
T ss_conf             999-----98999975377855999977999876105769999999976998998275232311273003-887899966


Q ss_pred             HHCCCCCCCC--EEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             1200176651--5445677-888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG  268 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG  268 (391)
                      -|-++|-..+  |.|+.++ +...+...            +.   .     ..|   .+++-+..|.+...|      ..
T Consensus       197 TKyi~GhsD~l~G~vv~~~~~~~~~~~~------------~~---~-----~~G---~~~~p~~a~l~~rGL------~T  247 (386)
T PRK08045        197 TKYLNGHSDVVAGVVIAKDPEVVTELAW------------WA---N-----NIG---VTGGAFDSYLLLRGL------RT  247 (386)
T ss_pred             CEEECCCCCCEEEEEEECCHHHHHHHHH------------HH---H-----HHC---CCCCHHHHHHHHHCC------CC
T ss_conf             6130588772348998177889999999------------99---9-----858---778988999998368------87


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCC--------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             8999999997799999998747971676-----68820--------0365317898247310113734567888999998
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQENDWIENL-----AVDET--------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~--------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      +.-|.+||.+++..+-+++++++.....     ...|.        ......+.|.+....          ...+.+...
T Consensus       248 L~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~~q~~g~Ggm~sf~l~g~~----------~~~~~f~~~  317 (386)
T PRK08045        248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDE----------QTLRRFLGG  317 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCH----------HHHHHHHHH
T ss_conf             7889999999999999998639985379899998995779999708999735799965979----------999999970


Q ss_pred             HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676----------------------75-056861588899999999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      |.--..++.+|+.++.                      .. -+|++++    .||++.|++-|+.||+...
T Consensus       318 l~lf~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~eDLi~DL~qAL~aa~  384 (386)
T PRK08045        318 LSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG----IEDGEDLIADLENGFRAAN  384 (386)
T ss_pred             CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHHC
T ss_conf             883556026688640003764235656899999866989596999960----0999999999999999850


No 60 
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.38  E-value=3.5e-09  Score=77.75  Aligned_cols=302  Identities=15%  Similarity=0.110  Sum_probs=178.2

Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf             68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r   25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG  104 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r  104 (391)
                      |. +++++...+-+.-||=|+-..  .+.++.|.+.++++.+ +|++ +.|++.++..++..++++|+.+++..=.|+..
T Consensus        40 p~-v~~a~~~~~~~~~~~YPd~~~--~~Lr~~iA~~~gv~~~-~I~v-g~Gs~e~i~~~~~~~~~~gd~Vl~p~Pty~~Y  114 (353)
T PRK05387         40 PK-VLEAIRAALGDDLRLYPDPDA--TALRQAIAAYYGVSPE-QVFV-GNGSDEVLAHAFLAFFKHDRPLLFPDITYSFY  114 (353)
T ss_pred             HH-HHHHHHHHHHHHHCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH
T ss_conf             99-999999967525247999978--9999999999786858-8998-57899999999999618998664078770369


Q ss_pred             HHHHHHHCCCCCEEEEECCCCCCCCHHHCC-CCCCEEEEEEECCCCEEECCEE---EECCCCCCEEEEEECC-HHHHCC-
Q ss_conf             887653238763067405777657867678-5565799742024202203203---5025686148864011-011025-
Q gi|254780153|r  105 WMSDIRQLSLQDVREFTAPYGSLPDFSKVD-FDRDVVFVWNGTTSGVCVPDVG---FIPESREGLVICDATS-AVFARH-  178 (391)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~v~~~h~ETstGv~~~~~~---~~~~~~~~llivD~vS-s~g~~p-  178 (391)
                        ...++..+..+..+........+++++. ..+.+.+++=..-||...+..+   ++...++.++|+|-.= .|+... 
T Consensus       115 --~~~a~~~g~~~~~vp~~~~~~~~~~~~~~~~~~v~l~nPnNPTG~~~~~~~l~~ll~~~~~~~vvvDEAY~ef~~~s~  192 (353)
T PRK05387        115 --PVYAGLYGIPYEEVPLDDDFSIDVEDYLRPNGGIIFPNPNAPTGIALPLADIERILAANPDSVVVIDEAYVDFGGESA  192 (353)
T ss_pred             --HHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHCCCCCH
T ss_conf             --999998095489950564345799997263676998489998788689999999997489988996053564187540


Q ss_pred             CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf             45-56857--9997001200176651--5445677888765411445778312320011232103347864466644889
Q gi|254780153|r  179 ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCI  253 (391)
Q Consensus       179 ~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i  253 (391)
                      ++ ..+.+  ++.-+--|.+| -||+  |+++.+++.++.+.+.+...                      .+++-+....
T Consensus       193 ~~l~~~~~nlivlrTfSK~~g-laGlRlGy~ia~~~li~~l~~~~~~~----------------------~~~~v~~~a~  249 (353)
T PRK05387        193 IPLIDRYPNLLVVQTLSKSRS-LAGLRVGFAIGHPELIEALERVKNSF----------------------NSYPLDRLAQ  249 (353)
T ss_pred             HHHHHCCCCEEEEEECCHHHC-CCCCCCEEEECCHHHHHHHHHHHHHC----------------------CCCCCCHHHH
T ss_conf             245650787787630416308-77662342106999999999998541----------------------6777669999


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf             99999998620103189999999977999999987479716766882003653178982473101137345678889999
Q gi|254780153|r  254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSML  333 (391)
Q Consensus       254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~  333 (391)
                      .+...+|+   .+.=++...++..+..+.+.+.+.+.+ +..+      -|.+|..+. ..+..          ..+.+.
T Consensus       250 ~aa~aal~---d~~~~~~~~~~~~~~R~~l~~~L~~lg-~~v~------ps~anFvl~-~~~~~----------~a~~~~  308 (353)
T PRK05387        250 AGAIAAIE---DEAYFEETCAKVIATRERLVEELEALG-FEVL------PSAANFVFA-RHPQH----------DAAALA  308 (353)
T ss_pred             HHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEE-ECCCC----------CHHHHH
T ss_conf             99999963---859999999999999999999999689-8789------898858999-89999----------999999


Q ss_pred             HHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             98886282872665567675056861588899999999999999999
Q gi|254780153|r  334 SFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       334 ~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      ..|.++|+.+.-........-+||+.+   ++++.++|+++|+.+++
T Consensus       309 ~~L~~~gI~VR~~~~~~l~~~iRisvg---t~een~~l~~al~~il~  352 (353)
T PRK05387        309 AALRERGIIVRHFNKPRIDQFLRITIG---TDEECEALVDALKEILA  352 (353)
T ss_pred             HHHHCCCEEEEECCCCCCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf             999809939997998999998999729---99999999999999974


No 61 
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.37  E-value=1.4e-09  Score=80.29  Aligned_cols=314  Identities=11%  Similarity=0.025  Sum_probs=170.9

Q ss_pred             HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             689999863210----3653289889999999999999996889985799974873489998753205789707997073
Q gi|254780153|r   25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES  100 (391)
Q Consensus        25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~  100 (391)
                      |..+++++.+.+    .++++ +.=..++-+.+.+.+++-++.+=+-+=++++.|++.++..++..++++||.+++.+=.
T Consensus        46 p~~i~~a~~~~~~~~~~~Y~~-~~G~~~LR~aia~~~~~~~g~~v~~d~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~  124 (389)
T PRK05764         46 PEHIKEAAIAALDEGKTKYTP-AAGIPELREAIAEKLKRDNGLDYEPDQIIVTTGAKQALYNAFMALLNPGDEVIIPAPY  124 (389)
T ss_pred             CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf             899999999998479999989-9887999999999999986899857978988887999999999958999989985786


Q ss_pred             HHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEE
Q ss_conf             688888765323876306740--57776578676785-----5657997420242022032035-----02568614886
Q gi|254780153|r  101 FGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVIC  168 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~lliv  168 (391)
                      |..- ...+...+ ..+..+.  .+.+..+++++++.     .+.+.++.=..-||...+..+.     +|..++.++|.
T Consensus       125 Y~~y-~~~~~~~g-~~~v~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~~a~~~~i~ii~  202 (389)
T PRK05764        125 WVSY-PEMVKLAG-GKPVFVPTGEENGFKLTPEQLEAAITPKTKALILNSPSNPTGAVYSKEELEAIADVAVEHDIWVLS  202 (389)
T ss_pred             CHHH-HHHHHHCC-CEEEEECCCHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             2458-99999649-865550436220876899999986384664999889989988675779999999998863532751


Q ss_pred             EECCH---HHHCC-C-------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             40110---11025-4-------556857999700120017665--15445677888765411445778312320011232
Q gi|254780153|r  169 DATSA---VFARH-I-------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       169 D~vSs---~g~~p-~-------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      |-+=+   +.+.+ .       ++.+--+.+.|.-|.++ -||  +|.++..++.+++....+.                
T Consensus       203 DEiY~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-lpGlRiG~~i~~~~li~~~~~~~~----------------  265 (389)
T PRK05764        203 DEIYEKLVYDGFEFTSIASLSPELFDRTITVNGFSKAYA-MTGWRLGYAAGPKELIKAMSKLQS----------------  265 (389)
T ss_pred             ECCCCCCCCCCCCCCCHHHHCCHHHCCCEEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH----------------
T ss_conf             013435556898888877849012114314314430247-866036999829999999999985----------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS  315 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~  315 (391)
                             .+...+++..-++...+|+.-.  .-++...+.++++.+.+.+.++..+++....  |+  +..-+-+.++..
T Consensus       266 -------~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~--P~--G~~~~~~~~~~~  332 (389)
T PRK05764        266 -------QSTSNPTSIAQYAAIAALTGPQ--DAVEEMRKAFEERRDLMVDGLNEIPGLECPK--PE--GAFYVFPNVSKG  332 (389)
T ss_pred             -------HCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECC--CC--CCEEEEEECCCC
T ss_conf             -------4147898699999999985978--7899999999999999999998489988647--88--107995888888


Q ss_pred             CCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             10113734567888999998-886282872665567675056861588899999999999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSF-LEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      ..      .    ...+... +.+.|+++--|..=..+.-||++..  .++++++.-++-|+.++++.|
T Consensus       333 ~~------~----~~~~~~~ll~~~gV~~~PG~~Fg~~g~~Rl~fa--~~~e~l~ea~~RL~~~l~~lk  389 (389)
T PRK05764        333 IT------D----SEDFAEALLEEAGVAVVPGIAFGAPGYVRLSYA--TSLEDIEEALERIERFLKSLK  389 (389)
T ss_pred             CC------C----HHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHCC
T ss_conf             99------9----999999999819999980732489984999983--889999999999999999758


No 62 
>PRK07505 hypothetical protein; Provisional
Probab=99.37  E-value=2e-09  Score=79.27  Aligned_cols=307  Identities=15%  Similarity=0.129  Sum_probs=170.4

Q ss_pred             CCCCCCHHHHHHHHHHHCC------CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC----
Q ss_conf             8776896899998632103------653289889999999999999996889985799974873489998753205----
Q gi|254780153|r   19 GPCAKRPGWSLGILEGALL------GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL----   88 (391)
Q Consensus        19 GP~~~~p~~v~~~~~~~~l------~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~----   88 (391)
                      |=+. +|+ |++++..++-      +-|.|..-..+++.+..+.|.++++. +   +++. .||..+.-+++-.|.    
T Consensus        61 GL~~-hp~-v~~aa~~a~~~yG~g~~~s~~~~g~~~~h~~LE~~LA~~~g~-e---al~f-~sg~~An~g~i~~Lasg~~  133 (405)
T PRK07505         61 GLDN-HPA-IIDGAVDALRRTGVLDLSSSRTRVQSQILKDLEESLSELFGA-S---VLTF-TSCSAAHLGILPLLASGHL  133 (405)
T ss_pred             CCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-C---EEEE-CCHHHHHHHHHHHHHHCCC
T ss_conf             8889-999-999999999986889876486414839999999999987398-7---7987-3268999999999972222


Q ss_pred             --CCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCCCCEEEEEEECCC--CEEECCEEE--ECC
Q ss_conf             --789707997-073688888765323876306740577765786767-855657997420242--022032035--025
Q gi|254780153|r   89 --GYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFDRDVVFVWNGTTS--GVCVPDVGF--IPE  160 (391)
Q Consensus        89 --~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~v~~~h~ETst--Gv~~~~~~~--~~~  160 (391)
                        ++++..+.. ...++-...+-+ +...  ..+...+......+++. +..+.+.++ .|+.-  |-.-|..++  +++
T Consensus       134 ~~~~~~~ii~D~~~HaSl~~~~g~-~~s~--a~~~~f~HnD~~~Le~~~~~~~~~~iV-~EgVfSMGdiApL~~l~~L~~  209 (405)
T PRK07505        134 TGGKPPHMVFDKYAHASLAILKGI-CADE--TEVETIDHNDLDALEDICKTNKRVAYV-ADGVYSMGGIAPVKELVDLQD  209 (405)
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHH-HCCC--CCEEEECCCCHHHHHHHHHHCCCCEEE-EEEEECCCCHHHHHHHHHHHH
T ss_conf             489987899987643784556677-5489--968986799999999987456994899-984255898345999999987


Q ss_pred             CCCCEEEEEECCHHHHC----------CC--CCCCCEEEEECCHHCCCCCCCCEEEE-ECHHHHHHHHHCCCCCCCCCHH
Q ss_conf             68614886401101102----------54--55685799970012001766515445-6778887654114457783123
Q gi|254780153|r  161 SREGLVICDATSAVFAR----------HI--DFNKLDVVTFSAQKVLGGEAGFGIII-LSPASVERLEKYVPSWPLPKIF  227 (391)
Q Consensus       161 ~~~~llivD~vSs~g~~----------p~--d~~~iDv~~a~sQK~l~~ppGl~~v~-~s~~al~~~~~~~~~~~~~~~~  227 (391)
                      ++++.++||=.=++|..          .+  ..+++|++.++-.|+||+..|  +|. -++...+-....  .       
T Consensus       210 ~y~a~L~vDEAH~~Gv~G~~GrG~~~~~~~~~~~~~~i~~gTlsKA~Gs~GG--~V~~g~~~~~~~l~~~--a-------  278 (405)
T PRK07505        210 KYGLFVYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIATSLGKAFGASGG--VIMLGYAEQIRLILRY--A-------  278 (405)
T ss_pred             HCCEEEEEECCCEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHCCCCE--EEEECCHHHHHHHHHH--C-------
T ss_conf             5676999965210012059997231687578888417998003210015615--9997859999999971--8-------


Q ss_pred             HCCHHHHHHCCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             20011232103347864466--6448899999999862010318999999997799999998747971676688200365
Q gi|254780153|r  228 RMVKGGRVMEGLFCGETINT--PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSN  305 (391)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~T--P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~  305 (391)
                                    ..+.||  +|...+.+...+++.+..+ -...+.++-+++.+.+...+..    ..    ....++
T Consensus       279 --------------r~~ifStal~p~~~aa~~as~~i~~~~-e~~~~~~~L~~ni~~~~~~l~~----~~----~~s~~p  335 (405)
T PRK07505        279 --------------GPYAFSQPLNVAALGAISASAEIHLSS-ELDQLQQKLHNNIALFDSLIPT----EQ----SGSFLP  335 (405)
T ss_pred             --------------CCHHCCCCCCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHCCC----CC----CCCCCC
T ss_conf             --------------411136644799999999999998575-4799999999999999974587----77----899998


Q ss_pred             CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             3178982473101137345678889999988862828726655676750---5686158889999999999999999999
Q gi|254780153|r  306 TSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       306 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                       ++++.+.++.           ....+...|.++|+.+..-.|+.++++   +||+.....+.+||+.|+++|+.++++.
T Consensus       336 -I~~v~ig~~~-----------~a~~~~~~L~e~Gi~v~~i~~PtVp~g~~rlRi~l~A~hT~edId~l~~~L~~v~~e~  403 (405)
T PRK07505        336 -IRLIYIGDED-----------TAIKYAKQLKDAGFYTSPVFFPVVAKGNAGLRIMFRADHTNEEIKRLCSLLKEILADY  403 (405)
T ss_pred             -EEEEEECCHH-----------HHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             -7999949999-----------9999999999789018756388389798249987488899999999999999999985


No 63 
>PRK03566 consensus
Probab=99.37  E-value=4e-09  Score=77.40  Aligned_cols=295  Identities=18%  Similarity=0.162  Sum_probs=174.8

Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf             68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r   25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG  104 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r  104 (391)
                      |..+++++...+-. .||=|+-..  .+.++.|.+.++++.+ +|++ +.|++.++..++..++++|+.+++..-+|+..
T Consensus        47 ~~~v~~a~~~~~~~-~~~YPd~~~--~~Lr~aiA~~~gv~~~-~I~v-~~Gs~e~i~l~~~a~~~pGd~Vl~~~P~y~~Y  121 (365)
T PRK03566         47 SPKALEAIRAALSE-LHRYPDGNG--FELKAALAEKLGVPPE-QITL-GNGSNDLLELLARAFLGPGDEIIYSQYAFAVY  121 (365)
T ss_pred             CHHHHHHHHHHHHH-CCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHCCCCCEEEECCCCHHHH
T ss_conf             99999999998886-166959668--9999999999784866-7998-77899999999998558998767668866899


Q ss_pred             HHHHHHHCCCCCEEEEE-CCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-
Q ss_conf             88765323876306740-577765786767-----855657997420242022032035---025-6861488640110-
Q gi|254780153|r  105 WMSDIRQLSLQDVREFT-APYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA-  173 (391)
Q Consensus       105 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs-  173 (391)
                        ....+..+..+..+. .++  ..+++++     +..+.+.++.=..-||...+..+.   +.. ..+.++|+|-+=. 
T Consensus       122 --~~~~~~~g~~~~~vp~~~~--~~dl~~l~~~i~~~~klv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vV~DEaY~e  197 (365)
T PRK03566        122 --PLATQAVGARAVEVPAKDY--GHDLEAMLAAITPKTRLVFIANPNNPTGTFLSAAELEAFLAKVPPDVLVVLDEAYTE  197 (365)
T ss_pred             --HHHHHHCCCEEEEECCCCC--CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHH
T ss_conf             --9999981974899617676--769588998638888689977999988773570658999975456744985245777


Q ss_pred             HHHCC-----CC-CCCCE--EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCC
Q ss_conf             11025-----45-56857--999700120017665--1544567788876541144577831232001123210334786
Q gi|254780153|r  174 VFARH-----ID-FNKLD--VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE  243 (391)
Q Consensus       174 ~g~~p-----~d-~~~iD--v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (391)
                      |...+     ++ ..+.+  ++.-+.-|.++. ||  +|.++.+++..++....+.                        
T Consensus       198 f~~~~~~~~~~~~~~~~~n~iv~rSfSK~~gl-aGlRiGy~ia~~~li~~l~~~~~------------------------  252 (365)
T PRK03566        198 YAAPEERPDSLAWLKKYPNLVVSRTFSKAYGL-AGLRVGYAVSNPEIADLLNRVRQ------------------------  252 (365)
T ss_pred             HCCCCCCCCHHHHHHHCCCEEEEEECCHHCCC-CCHHHEEEECCHHHHHHHHHHCC------------------------
T ss_conf             50477777788876413772598545452057-57301410169999999999618------------------------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCH
Q ss_conf             446664488999999998620103189999999977999999987479716766882003653178-9824731011373
Q gi|254780153|r  244 TINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDI  322 (391)
Q Consensus       244 ~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~  322 (391)
                       +++.++....+...+|+   .+.=++...+..++..+.+.+.+++.+ +..+.      |.++-. ++++.+       
T Consensus       253 -p~~vn~~aq~aa~aaL~---~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p------s~~nF~l~~~~~~-------  314 (365)
T PRK03566        253 -PFNVNSLALAAAVAALD---DDDFLAKSRELNRAGMQQLEAGFDALG-LEYIP------SKGNFVTVDVGRD-------  314 (365)
T ss_pred             -CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC------CCCEEEEEECCCC-------
T ss_conf             -88977999999999958---999999999999989999999999787-98878------9980899978999-------


Q ss_pred             HHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             4567888999998886282872665-5676750568615888999999999999999999
Q gi|254780153|r  323 NSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       323 ~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                            ...+...|.++|+++.-+. +. .+.-+||+.+   ++++.++|+++|+..+++
T Consensus       315 ------~~~l~~~L~~~gV~Vrp~~~fg-l~~~lRis~g---~~een~~l~~aL~~il~e  364 (365)
T PRK03566        315 ------AAAIYQALLRQGVIVRPVAGYG-MPNHLRVSIG---LPEENARFLAALKKVLAE  364 (365)
T ss_pred             ------HHHHHHHHHHCCEEEEECCCCC-CCCEEEEEEC---CHHHHHHHHHHHHHHHCC
T ss_conf             ------9999999997791898689899-9897999958---999999999999998766


No 64 
>PRK05968 hypothetical protein; Provisional
Probab=99.37  E-value=3.6e-10  Score=84.01  Aligned_cols=284  Identities=14%  Similarity=0.107  Sum_probs=171.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+=+...   + +..+||-+|+.+++++++++|+.+++...-||.  +++.......+.+++.+
T Consensus        61 ~NPT~~~lE~~l---a~LEgg~~---a-~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~v~~v  133 (389)
T PRK05968         61 DNPTVRAFEEML---AKLEGAED---A-RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAYRLFGTLLKRMGVEVDYV  133 (389)
T ss_pred             CCHHHHHHHHHH---HHHHCCCE---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf             886699999999---99829963---8-8854889999999999608999898588766758999998886078469996


Q ss_pred             ECCCCCCCCHHHCCCC-CCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf             0577765786767855-657997420242022032---0--3502568614886401--101102545568579997001
Q gi|254780153|r  121 TAPYGSLPDFSKVDFD-RDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ  192 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~~-~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ  192 (391)
                      +..     +.+.++.. +..-+++.||.+--.+.+   .  ..+++++++++|||-+  |-+...|++. ++|+++-|.-
T Consensus       134 d~~-----d~~~~~~~i~~Tklv~~EtpsNP~l~v~DI~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~T  207 (389)
T PRK05968        134 DGR-----DEEAVAKALPGAKLLYLESPTSWVFELQDIAALAALAKRHGVVTVIDNSWASPVFQRPITL-GVDLVIHSAS  207 (389)
T ss_pred             CCC-----CHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHHH-CCCEEEEECC
T ss_conf             899-----9999996276872899978999887273899999999983995999778611642584240-7987997045


Q ss_pred             HCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             200176651--544567788876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r  193 KVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS  270 (391)
Q Consensus       193 K~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~  270 (391)
                      |-++|-+-+  |+|+.+++.+.+.....              .     ...|.   +++-+..|.+...|      ..+.
T Consensus       208 Kyi~GHsDvl~G~v~~~~~~~~~~~~~~--------------~-----~~lG~---~lsP~~a~l~lRGL------~TL~  259 (389)
T PRK05968        208 KYLGGHSDTVAGVVAGSKEHIARINAEA--------------Y-----PYLGG---KLSPFEAWLLLRGL------RTLP  259 (389)
T ss_pred             CCCCCCCCCEEEEEECCHHHHHHHHHHH--------------H-----HHCCC---CCCHHHHHHHHCCC------CCHH
T ss_conf             3446898844269945699999999999--------------9-----86277---78858889998479------8699


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---------CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE
Q ss_conf             999999977999999987479716766882003---------65317898247310113734567888999998886282
Q gi|254780153|r  271 ACVERCNANAAVLFQFIQENDWIENLAVDETTR---------SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEI  341 (391)
Q Consensus       271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r---------S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~  341 (391)
                      -|.+||.+++..+-+|+++++..... ..|.-.         ....++|.+.+..           ..+.+...|.--..
T Consensus       260 lRm~rh~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~~~l~g~gg~~sf~l~~~~-----------~~~~f~~~L~lf~~  327 (389)
T PRK05968        260 LRMKAHEASALLIARRLKAHPVVETV-CHPALANHPPAGLSGTSGLFSFIFREGV-----------DVRRFADALKLFRL  327 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCHHHHCCCCCEEEEEEECCHH-----------HHHHHHHHCCCCEE
T ss_conf             99999999999999999619998663-3888522313421786437999957779-----------99999984880756


Q ss_pred             EECCCCCCCC--------------------C--C-EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8726655676--------------------7--5-056861588899999999999999999999
Q gi|254780153|r  342 AYDIGSYRDA--------------------P--L-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       342 ~~~~~~~r~~--------------------~--~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      +..+|+.++.                    |  . -+|++++    .||++.|++-|+.||++.+
T Consensus       328 a~SlGg~eSLi~~~~~~~~~~~~~~~~~~~Gi~~~liRlSVG----lEd~eDLi~Dl~qAL~~a~  388 (389)
T PRK05968        328 GVSWGGHESLVVPAEVVLQQKAQPNSAARFGISPRSVRLHVG----LEGTEALWADLEQALAAAS  388 (389)
T ss_pred             ECCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHHC
T ss_conf             316686430218706641677998899865969496999931----0999999999999999843


No 65 
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.36  E-value=3.4e-09  Score=77.87  Aligned_cols=313  Identities=15%  Similarity=0.093  Sum_probs=182.6

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             88868887768968999986321036532898899999999999999968899857999748734899987532057897
Q gi|254780153|r   13 RPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG   92 (391)
Q Consensus        13 ~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~   92 (391)
                      +.+++=-|-...|. +++++....-. .||=|+-  -..+.++.|.+.++++.+ .|++ ..|+...+..++..++++|+
T Consensus        37 kL~sNENP~gpsp~-v~~Ai~~~~~~-~~rYPd~--~~~~Lr~~lA~~~gv~~e-~I~~-gnGSdeli~~~~~a~~~~g~  110 (370)
T PRK08153         37 RIGANESGFGPSPS-VIAAMREAAAE-VWKYGDP--ENHDLRHALAAHHGVAPE-NIMV-GEGIDGLLGLIVRLYVEPGD  110 (370)
T ss_pred             EECCCCCCCCCCHH-HHHHHHHHHHH-CCCCCCC--CHHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCC
T ss_conf             86899999898999-99999976864-5679997--789999999998687866-7998-08889999999999855999


Q ss_pred             EEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----C-C-CCCCEEEEEEECCCCEEECCEEE--EC-C-CC
Q ss_conf             0799707368888876532387630674057776578676----7-8-55657997420242022032035--02-5-68
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----V-D-FDRDVVFVWNGTTSGVCVPDVGF--IP-E-SR  162 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~-~-~~~~v~~~h~ETstGv~~~~~~~--~~-~-~~  162 (391)
                      .++.....|..-.. .+...+...+.+.......  +++.    . + ..+.+.+|.=..-||...+..++  +. . ..
T Consensus       111 ~vv~~~p~y~~y~~-~~~~~g~~~~~vp~~~~~~--d~~~~l~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~l~~~~~~  187 (370)
T PRK08153        111 AVVTSLGAYPTFNY-HVAGFGGRLVTVPYRDDHE--DLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPE  187 (370)
T ss_pred             CCCCCCCCCCHHHH-HHHHHCCEEEEEECCCCCC--CHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf             23437887516999-9998196699994456544--86999986037897389976895985776786889999984777


Q ss_pred             CCEEEEEECCH-HHHC----CCCCCCCEEE-EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             61488640110-1102----5455685799-97001200176651--544567788876541144577831232001123
Q gi|254780153|r  163 EGLVICDATSA-VFAR----HIDFNKLDVV-TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       163 ~~llivD~vSs-~g~~----p~d~~~iDv~-~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      ++++|+|-.=. |...    ++....=.++ .-+--|.+| -+|+  |..+.+++.++...+...               
T Consensus       188 ~~lvVvDEAY~ef~~~~~~~~l~~~~~NliVlRTfSK~yg-LAGlRlGY~ia~~~li~~l~k~r~---------------  251 (370)
T PRK08153        188 TTLLVLDEAYCETAPASAAPPIDPDDPNVIRMRTFSKAYG-LAGARVGYAIGTPGTIKAFDKVRN---------------  251 (370)
T ss_pred             CCEEEEEHHHHHHCCCCCHHHHHHCCCCEEEEEECCHHCC-CCCCCCCCCCCCHHHHHHHHHHCC---------------
T ss_conf             7389621535643564217788743998899982622037-888743201389999999998648---------------


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-EC
Q ss_conf             21033478644666448899999999862010318999999997799999998747971676688200365317898-24
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IV  313 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~  313 (391)
                                ++.-+.....+...+|+   .+.=++...++..+-.+.+.+.++..+ +..+      -|.+|..+. +.
T Consensus       252 ----------p~~vn~~aq~aa~aaL~---d~~~~~~~~~~i~~~R~~l~~~l~~~g-~~~~------pS~aNFil~~~~  311 (370)
T PRK08153        252 ----------HFGMNRIAQAAALAALK---DQAYLAEVVAKIAAARDRIAAIARANG-LTPL------PSATNFVAIDCG  311 (370)
T ss_pred             ----------CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEEECC
T ss_conf             ----------98877999999999977---999999999999999999999998685-8479------997877999848


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             7310113734567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r  314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      .          +......+...|.++|+++.-.+.......+||+++   ++++.++|+++|+.+++++|
T Consensus       312 ~----------~~~~a~~l~~~L~~~GIlVR~~~~~~l~~~lRIsiG---t~een~~~l~aL~eiLk~~~  368 (370)
T PRK08153        312 R----------DGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSVG---PEEELDLFAEALPEALKAAR  368 (370)
T ss_pred             C----------CHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHHHHHHH
T ss_conf             9----------746999999999978919944998889998999739---99999999999999999863


No 66 
>PRK07049 methionine gamma-lyase; Validated
Probab=99.35  E-value=1.2e-09  Score=80.68  Aligned_cols=276  Identities=17%  Similarity=0.189  Sum_probs=159.3

Q ss_pred             HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HH-HHHHHCCCCCEEEEECCCCCCCC
Q ss_conf             9999999968899857999748734899987532057897079970736888--88-76532387630674057776578
Q gi|254780153|r   53 AIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WM-SDIRQLSLQDVREFTAPYGSLPD  129 (391)
Q Consensus        53 ~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~-~~~~~~~~~~~~~~~~~~g~~~~  129 (391)
                      ..+.|..|=+..    -.+..+||.+|..+++++++++|+.+++...-||.-  .+ ..+.+.+ ..++.....    .+
T Consensus        88 lE~~iA~LEg~~----~a~~~sSGmaAi~~~ll~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~G-I~~~~~~d~----~d  158 (427)
T PRK07049         88 VEDRLAVYEGAE----AAALFSSGMSAIATTLLAFVRPGDVIVHSQPLYGGTETLLAKTFRNFG-VGAVGFADG----VS  158 (427)
T ss_pred             HHHHHHHHCCCC----CEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECC----CC
T ss_conf             999999980998----489934699999999998518999999899982789999999999759-889997089----99


Q ss_pred             HHHCC-------CCCCEEEEEEECCCCEEE---CCEEE--EC------CCCCCEEEEEEC--CHHHHCCCCCCCCEEEEE
Q ss_conf             67678-------556579974202420220---32035--02------568614886401--101102545568579997
Q gi|254780153|r  130 FSKVD-------FDRDVVFVWNGTTSGVCV---PDVGF--IP------ESREGLVICDAT--SAVFARHIDFNKLDVVTF  189 (391)
Q Consensus       130 ~~~~~-------~~~~v~~~h~ETstGv~~---~~~~~--~~------~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a  189 (391)
                      .+.++       ......+++.||.+--..   ++..+  ++      +.+++++|||-+  +-+...|++. ++|+++-
T Consensus       159 ~~~~~~~i~~~~~~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~g~~~~~~i~~vvDNT~atP~~~~Pl~~-GaDivvh  237 (427)
T PRK07049        159 EAAIEAAAEAAAAKGRVSLIYIETPANPTNALVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEH-GADLSVY  237 (427)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHCCCCCEEEEECCCCCCCCCCCHHH-CCCEEEE
T ss_conf             999999998621478706999978999877265889999999984420147876999788623213681542-8988999


Q ss_pred             CCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             001200176651--544567788876541144577831232001123210334786446664488999999998620103
Q gi|254780153|r  190 SAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG  267 (391)
Q Consensus       190 ~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g  267 (391)
                      |.-|-|+|-+-+  |.|+.+++.++++....               .     ..|.   +++-+..|.+...|      .
T Consensus       238 S~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~---------------~-----~~G~---~~sP~~a~L~lrGL------~  288 (427)
T PRK07049        238 SLTKYVGGHSDLVAGAVLGRKALVRQVRALR---------------G-----AIGT---QLDPHSCWMLGRSL------E  288 (427)
T ss_pred             ECCCEECCCCCCCCCEEECCHHHHHHHHHHH---------------H-----HHCC---CCCCHHHHHHHCCC------C
T ss_conf             6361424887751351646799999999987---------------5-----3147---78906778886368------8


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCC--C----CCCCC---------CCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             18999999997799999998747971676--6----88200---------365317898247310113734567888999
Q gi|254780153|r  268 GLSACVERCNANAAVLFQFIQENDWIENL--A----VDETT---------RSNTSICMKIVDSDIASLDINSQKSFCKSM  332 (391)
Q Consensus       268 Gl~~~~~r~~~~a~~l~~~i~~~~~~~~~--~----~~~~~---------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~  332 (391)
                      .|.-|.+||.+++..+-+|+++++.....  +    .+..+         -...++.|.+....      +.    ...+
T Consensus       289 TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~Ypgl~~~~~~~~~l~~~~~~G~Gg~~sf~l~g~~------~~----~~~f  358 (427)
T PRK07049        289 TLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVFKRQCTGAGSTFSFDIKGGQ------AA----AFRF  358 (427)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCH------HH----HHHH
T ss_conf             6999999999999999999984898327977897888768999999727898438999972889------99----9999


Q ss_pred             HHHHHHCCEEECCCCCCCCC----------------------C-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99888628287266556767----------------------5-0568615888999999999999999999
Q gi|254780153|r  333 LSFLEKEEIAYDIGSYRDAP----------------------L-GLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       333 ~~~l~~~g~~~~~~~~r~~~----------------------~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      ...|.--..++.+|+.++.-                      . -+|++++    .||++.|++-|+.||+.
T Consensus       359 ~~~l~lf~~a~SlGg~eSLi~hPa~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~eDLi~DL~qAL~a  426 (427)
T PRK07049        359 LNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESLIRLSIG----IEHPDDLIADLAQALDA  426 (427)
T ss_pred             HHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHC
T ss_conf             982880636426687650313753115646999999965979296999923----39999999999999832


No 67 
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.34  E-value=2.5e-09  Score=78.65  Aligned_cols=285  Identities=13%  Similarity=0.098  Sum_probs=167.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++.   |..+-+..    -.++.+||-+|..+++++++++|+.+++...-||.-  .+.......+.++...
T Consensus        60 ~NPT~~~lE~~---la~LEg~~----~a~~fsSGmaAis~~ll~ll~~Gd~il~~~~~YggT~~l~~~~l~~~Gi~v~~~  132 (395)
T PRK08114         60 GTLTHFSLQEA---MCELEGGA----GCALYPCGAAAVANSILAFVEQGDHVLMTGTAYEPSQDFCSKILSKLGVTTTWF  132 (395)
T ss_pred             CCHHHHHHHHH---HHHHHCCC----CEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf             88769999999---99970997----379826889999999999708999899768885689999999998759569985


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCC--CEEEEEEC--CHHHHCCCCCCCCEEEEE
Q ss_conf             057776578676785--565799742024202203203-----5025686--14886401--101102545568579997
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESRE--GLVICDAT--SAVFARHIDFNKLDVVTF  189 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~--~llivD~v--Ss~g~~p~d~~~iDv~~a  189 (391)
                      +.     .+.++++.  .+..-+++.||.+--...+..     .+++.++  ++++||-+  +-+...|+++ ++|+++-
T Consensus       133 d~-----~d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~~~~~~~vvDNTfatP~~~~Pl~~-GaDivih  206 (395)
T PRK08114        133 DP-----LIGADIAKLIQPNTKVVFLESPGSITMEVHDIPAIVAAVRSVAPDAVIMIDNTWAAGVLFKALDF-GIDISIQ  206 (395)
T ss_pred             CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC-CCEEEEE
T ss_conf             79-----99999997468775499994489866522679999999986056868997188788765544466-6749999


Q ss_pred             CCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             00120017665--1544567788876541144577831232001123210334786446664488999999998620103
Q gi|254780153|r  190 SAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG  267 (391)
Q Consensus       190 ~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g  267 (391)
                      |.-|-|+|-.-  .|.++.+++.+++.....               .     ..|.   +++-+..|.+...|      .
T Consensus       207 S~TKyl~GHsDv~~G~v~~~~~~~~~l~~~~---------------~-----~~G~---~~~p~~a~Ll~RGL------~  257 (395)
T PRK08114        207 AGTKYLIGHSDAMIGTAVANARCWEQLRENS---------------Y-----LMGQ---MVDADTAYMTSRGL------R  257 (395)
T ss_pred             ECCCEECCCCCCEEEEEECCHHHHHHHHHHH---------------H-----HHCC---CCCHHHHHHHHCCC------C
T ss_conf             6665005778852478852788999999999---------------9-----7378---79979999997567------6


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf             18999999997799999998747971676688200--------------3653178982473101137345678889999
Q gi|254780153|r  268 GLSACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSML  333 (391)
Q Consensus       268 Gl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~  333 (391)
                      .+.-|.+||.+++..+-+|+++++..... ..|..              .....+.|.+.+...    .+.    ...+.
T Consensus       258 TL~lRm~~~~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~h~la~~~~~g~gg~~sf~l~~~~~----~~~----~~~fl  328 (395)
T PRK08114        258 TLGVRLKQHQESSLKVAEWLAEHPEVARV-NHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLT----DEE----LANYL  328 (395)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCC----HHH----HHHHH
T ss_conf             38899999999999999999639997589-8999989843899997578987799999857779----999----99999


Q ss_pred             HHHHHCCEEECCCCCCCC--------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             988862828726655676--------------------75-05686158889999999999999999999
Q gi|254780153|r  334 SFLEKEEIAYDIGSYRDA--------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       334 ~~l~~~g~~~~~~~~r~~--------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      ..|.--..+..+|+.++.                    .. -+|+++|    .||++.|++-||.||++.
T Consensus       329 ~~l~lf~~a~SlGg~eSLi~~~~~~~~~~~~~~~~~~i~~~liRlSvG----lEd~eDLi~DL~qAL~~i  394 (395)
T PRK08114        329 DNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIG----LEDVDDLIADLAAGFARI  394 (395)
T ss_pred             HCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHH
T ss_conf             808926582051763402217985444436803443999797999942----399899999999999833


No 68 
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.33  E-value=2e-08  Score=72.98  Aligned_cols=329  Identities=14%  Similarity=0.044  Sum_probs=177.0

Q ss_pred             CCCCCCCCCC-CCCCCHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHH
Q ss_conf             8998886888-7768968999986321036-5328---988999999999999999688998-57999748734899987
Q gi|254780153|r   10 KPKRPFFSSG-PCAKRPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMA   83 (391)
Q Consensus        10 ~p~~~~F~pG-P~~~~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~   83 (391)
                      .|.-++|+-| |.--+|..+++++.+.+-+ -.|+   +.=..++-+.+-+.+++-.+.+-+ -..++++.|++.++..+
T Consensus        26 ~~~iI~l~~G~pd~~~p~~v~~a~~~al~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~vt~Ga~~al~~~  105 (389)
T PRK05957         26 NPGTISLGQGVVSYPPPPEAIEALNNFLANPENHLYQSVQGIPPLLEAITQKLQADNGIEINNENAIVVTAGSNMAFMNA  105 (389)
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
T ss_conf             99938899989999988999999999982867886899757499999999999999689989898899887889999999


Q ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--
Q ss_conf             5320578970799707368888876532387630674057776578676785-----565799742024202203203--
Q gi|254780153|r   84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--  156 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--  156 (391)
                      +.-++.+||.+++..=.|..- ...+...+ ..+..+..+.+...+++.++.     .+.+.++.-..-||...+..+  
T Consensus       106 ~~al~~pGD~Vlv~~P~Y~~~-~~~~~~~g-~~~v~vp~d~~~~~~~~~l~~~i~~~~k~iil~~P~NPTG~v~s~~~l~  183 (389)
T PRK05957        106 ILAITDPGDEIILNTPYYFNH-EMAITMAG-CQPVLVPTDENYQLRPEAIEAAITPKTRAIVTISPNNPTGVVYPEALLR  183 (389)
T ss_pred             HHHHCCCCCEEEECCCCCCCH-HHHHHHCC-CCEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHH
T ss_conf             999759999899778877668-99999749-9358865799889799999984510262786189989989887677899


Q ss_pred             ---EECCCCCCEEEEEECCHHH---HCC-C------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCC
Q ss_conf             ---5025686148864011011---025-4------556857999700120017665--154456778887654114457
Q gi|254780153|r  157 ---FIPESREGLVICDATSAVF---ARH-I------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSW  221 (391)
Q Consensus       157 ---~~~~~~~~llivD~vSs~g---~~p-~------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~  221 (391)
                         .+|..++.++|.|-+=+-.   +.+ +      +..+.-+.+.|.-|.++ .||  +|.++..++.+++....+   
T Consensus       184 ~l~~la~~~~~~ii~DE~Y~~l~~~~~~~~s~~~~~~~~~~vI~i~S~SK~~~-~~G~RvG~~v~~~~l~~~~~~~~---  259 (389)
T PRK05957        184 AVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYG-FASWRIGYMVIPIHLLEAIKKIQ---  259 (389)
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEECHHHHHHHHHHH---
T ss_conf             99987606781899898432134588666776544563454301344431244-65643488983899999999998---


Q ss_pred             CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                          ..+...+++..-++...+|+.-  +.-++...++.+++.+.+.+.+...+....+.. ++
T Consensus       260 --------------------~~~~~~~~~~~Q~aa~~al~~~--~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~-p~  316 (389)
T PRK05957        260 --------------------DTILICPPVVSQYAALGALQVG--KSYCQQHLPEIAQVRQILLKSLAQLQDWCFLHP-AN  316 (389)
T ss_pred             --------------------HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC-CC
T ss_conf             --------------------5456785399999999999779--999999999999999999999985689726607-98


Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             03653178982473101137345678889999988-86282872665-567675-0568615888999999999999999
Q gi|254780153|r  302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                        +..-+-..++. .   .+       ...+...+ .+.|+++--|. +...+. -+|++. ++.+++.++.-++-|..+
T Consensus       317 --G~f~~~~~~~~-~---~~-------~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~Rlsf-~~~~~e~l~eg~~RL~~a  382 (389)
T PRK05957        317 --GAFYCFLKVNT-D---LN-------DFELVKQLIRDYRVAVIPGSTFGMKNGCYLRIAY-GALQKATAKEGIERLVQG  382 (389)
T ss_pred             --EEEEEEEECCC-C---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEE-CCCCHHHHHHHHHHHHHH
T ss_conf             --57999897898-9---69-------9999999999799999787310889999899985-429999999999999999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780153|r  379 FYF  381 (391)
Q Consensus       379 ~~~  381 (391)
                      +++
T Consensus       383 lk~  385 (389)
T PRK05957        383 LKT  385 (389)
T ss_pred             HHH
T ss_conf             999


No 69 
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.33  E-value=5e-09  Score=76.75  Aligned_cols=295  Identities=18%  Similarity=0.124  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf             68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r   25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG  104 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r  104 (391)
                      |. +++++...... .||=|+  .-..+.++.|.+.++++.+ .|+ +..|++..+..++..++.+|+.+++..-.|+..
T Consensus        45 ~~-v~~al~~~~~~-~~~YPd--~~~~~Lr~~iA~~~gv~~e-~I~-vgnGs~E~i~~~~~a~~~~gd~vl~~~Ptf~~Y  118 (366)
T PRK01533         45 PR-VLDELQKSWLD-HALYPD--GGATTLRQTIANKLHVKME-QVL-CGSGLDEVIQIISRAVLKAGDNIVTAGATFPQY  118 (366)
T ss_pred             HH-HHHHHHHHHHH-CCCCCC--CCHHHHHHHHHHHHCCCHH-HEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHH
T ss_conf             99-99999987874-557969--7789999999998682821-299-817899999999999947998236589886457


Q ss_pred             HHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC-CCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEEC-CHH
Q ss_conf             88765323876306740577765786767----855-657997420242022032035---025-68614886401-101
Q gi|254780153|r  105 WMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD-RDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDAT-SAV  174 (391)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~v-Ss~  174 (391)
                        ...++..+..+..+....+ ..+++++    +.. +.+.++.=..-||...+..++   +.. ..+.++|+|=. -.|
T Consensus       119 --~~~a~~~g~~~~~v~l~~~-~~d~~~i~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~ll~~~~~~~~vviDEAY~ef  195 (366)
T PRK01533        119 --RHHAIIEGCEVKEVALNNG-VYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEY  195 (366)
T ss_pred             --HHHHHHCCCEEEEEECCCC-CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHH
T ss_conf             --9999980864899836778-6699999975065987899779999976746706589998627877378612878976


Q ss_pred             HHC-C----CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCC
Q ss_conf             102-5----45-56857--9997001200176651--5445677888765411445778312320011232103347864
Q gi|254780153|r  175 FAR-H----ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGET  244 (391)
Q Consensus       175 g~~-p----~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (391)
                      ... +    ++ ..+.+  ++.-+--|.+| -||+  |.++.+++.+++......                         
T Consensus       196 ~~~~~~~~~~~l~~~~~NliVlrTfSK~~g-laGlRiGy~ia~~~ii~~l~~~~~-------------------------  249 (366)
T PRK01533        196 VTAKDFPETLPLLEKHKNILVLRTFSKAYG-LASFRVGYAVGHEELIEKLNVVRL-------------------------  249 (366)
T ss_pred             HCCCCCCHHHHHHHCCCCEEEEECCCHHCC-CCCHHHHHHHCCHHHHHHHHHHCC-------------------------
T ss_conf             425787105778761898489972743236-830345366289999999998558-------------------------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf             46664488999999998620103189999999977999999987479716766882003653178982473101137345
Q gi|254780153|r  245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINS  324 (391)
Q Consensus       245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~  324 (391)
                      |++-+.....+...+|.   ++.-++...+...+..+.+...++.. ++..+      -|.+|..+. +-+.        
T Consensus       250 p~~vn~la~~aa~aaL~---d~~~~~~~~~~~~e~~~~~~~~l~~~-g~~v~------pS~aNFilv-~~~~--------  310 (366)
T PRK01533        250 PFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY------QSQTNFIFL-PVEN--------  310 (366)
T ss_pred             CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC------CCCCCEEEE-ECCC--------
T ss_conf             98843999999999967---99999999999999999999999878-68589------997877998-6699--------


Q ss_pred             HHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6788899999888628287266556767505686158889999999999999999999998
Q gi|254780153|r  325 QKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       325 ~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                          ...+...|.++|+++     |..+..+||+.+   ++++.++|+++|+..|.+.|-.
T Consensus       311 ----~~~l~~~L~~~GIlV-----R~~~~~iRIsvg---t~eeN~~ll~aLke~~e~~~~~  359 (366)
T PRK01533        311 ----GGEIYEACAHAGFII-----RPFPNGVRITVG---TREQNEGVISVLQQHFENKKRK  359 (366)
T ss_pred             ----HHHHHHHHHHCCEEE-----EECCCCEEEECC---CHHHHHHHHHHHHHHHHHCCCC
T ss_conf             ----999999999689899-----899598788279---9999999999999999855632


No 70 
>PRK06507 consensus
Probab=99.33  E-value=1.6e-08  Score=73.54  Aligned_cols=331  Identities=10%  Similarity=0.001  Sum_probs=176.5

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHCCCCCCC-CH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             8868887768-9689999863210365328-98--899999999999999968899857999748734899987532057
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGALLGRSHR-CV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG   89 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~l~~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~   89 (391)
                      .+|+-|=-.. +|..+++++.+.+..-.++ ++  =..++-+.+-+.+++-++.+-+.+=++++.|++.++..++..++.
T Consensus        34 i~L~iG~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~I~vt~G~~~al~~~~~~l~~  113 (400)
T PRK06507         34 VSLSSGEPDFPTPAHAIEAAHAAALAGDTKYPPMDGTPALKAAIQRKFKRENNLDYDPSEIVVSNGGKQVIFNAMMATCN  113 (400)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCC
T ss_conf             77789388998889999999999745899879987849999999999999848999824389817829999999999669


Q ss_pred             CCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----
Q ss_conf             8970799707368888876532387630674--057776578676785-----5657997420242022032035-----
Q gi|254780153|r   90 YRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----  157 (391)
Q Consensus        90 ~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----  157 (391)
                      +||.+++..=.|..- ...+...+. .+..+  ....|..+++++++.     .+.+.++.=..-||...+..+.     
T Consensus       114 pGD~Vli~~P~y~~y-~~~~~~~g~-~~v~v~l~~~~g~~~d~~~le~~~~~~tk~iil~~P~NPTG~v~s~~~l~~i~~  191 (400)
T PRK06507        114 PGDEVVIPAPSWVSY-ADIVKLAGG-VPVAVPCREETGFKLRPEDLEAAITPRTKWLFLNFPNNPTGAACTRAEMAAIAE  191 (400)
T ss_pred             CCCEEEECCCCCCHH-HHHHHHCCC-EEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf             999899905877405-799998199-159975670117641699999746756649997499293128864779999998


Q ss_pred             ECCCC-CCEEEEEECCHH---HHCC-C-------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCC
Q ss_conf             02568-614886401101---1025-4-------556857999700120017665--15445677888765411445778
Q gi|254780153|r  158 IPESR-EGLVICDATSAV---FARH-I-------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPL  223 (391)
Q Consensus       158 ~~~~~-~~llivD~vSs~---g~~p-~-------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~  223 (391)
                      ++.++ +.++|.|-+=+-   .+.+ .       ++.+--+.+.|.-|.++ .||  +|.++..++.+++....+     
T Consensus       192 ~a~~~~~v~visDEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~~~-~~G~RiG~~~~~~~~i~~~~~~~-----  265 (400)
T PRK06507        192 VMLRHPHVWIMTDDIYEHLVYDGFEFCTIAEVEPRLYDRVLTMNGVSKAYA-MTGWRLGFCGGPKELIKAMSNVN-----  265 (400)
T ss_pred             HHHHCCCCEECCCCCHHHHEECCCCCCCHHHHCCCCCCCEEEEECCCCCCC-CCCCCEEEEECCHHHHHHHHHHH-----
T ss_conf             665316821405664244120897788788858564553589833544446-76510487748799999999998-----


Q ss_pred             CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             31232001123210334786446664488999999998620103189999999977999999987479716766882003
Q gi|254780153|r  224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR  303 (391)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r  303 (391)
                                        .+....++...-++...+|+.-.  .-++.+.+.++++.+.+.+.+...+++....++-.+ 
T Consensus       266 ------------------~~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rrd~l~~~L~~~~g~~~~~P~G~f-  324 (400)
T PRK06507        266 ------------------GQATGGIATLAQAAAAAALDGPQ--DLLKERAAIYRERRDFVVEKLAEIPGLTCHKPEGAF-  324 (400)
T ss_pred             ------------------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE-
T ss_conf             ------------------65247654399999999984977--777899999999999999999847899567898147-


Q ss_pred             CCCEEEEEECCCCCCC----CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             6531789824731011----373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  304 SNTSICMKIVDSDIAS----LDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       304 S~~~v~~~~~d~~~~~----~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                         -+-..+++-....    .....+..+   ...++.+.|+++--|..=..+.-+||+..  .+.++++.-++-|+.++
T Consensus       325 ---y~~~~~~~~~~~~~~~~~~~~~d~~f---~~~Ll~e~gV~v~PG~~FG~~~~vRis~a--~~~~~l~eal~Rl~~f~  396 (400)
T PRK06507        325 ---YIYPNIAGLIGKTSKGGRRLETDEDF---VMALLEEQHVATVQGAAYGMSPYFRLSYA--TDMESLGEGCARIAQFC  396 (400)
T ss_pred             ---EEEEECCCCCCCCCCCCCCCCCHHHH---HHHHHHHCCEEEECCCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHH
T ss_conf             ---99775401023345345667888999---99999858999977874489983999964--99999999999999999


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r  380 YF  381 (391)
Q Consensus       380 ~~  381 (391)
                      ++
T Consensus       397 ~~  398 (400)
T PRK06507        397 ED  398 (400)
T ss_pred             HH
T ss_conf             96


No 71 
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.33  E-value=3.1e-09  Score=78.11  Aligned_cols=285  Identities=14%  Similarity=0.141  Sum_probs=166.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..|-+...   + +..+||-+|+.+++++++++|+.++....-||.-  +.+......+.+++.+
T Consensus        62 ~NPT~~~lE~~l---a~LEgg~~---a-~~~sSGmaAi~~~ll~~l~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~v  134 (392)
T PRK05967         62 GTPTTDALCKAI---DALEGSAG---T-ILVPSGLAAVTVPLLGFLSAGDHALIVDSVYYPTRHFADTMLKRLGVEVEYY  134 (392)
T ss_pred             CCHHHHHHHHHH---HHHCCCCC---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEE
T ss_conf             887799999999---99809987---7-9945779999999999738998899448984458999999876368699998


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--5657997420242022032---0--3502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.+.++.  .....+++.||.+--.+.+   .  ..+++++++++|||-+  +-+...|++. +.|+++-|.
T Consensus       135 d~~-----~~~~~~~~i~~~Tklv~~Etp~NP~l~v~Di~~ia~~A~~~g~~~vVDNTfatP~~~~Pl~~-GADiVvhS~  208 (392)
T PRK05967        135 DPE-----IGAGIEKLMRPNTKVVFTESPGSNTFEIQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDF-GVDISIHAA  208 (392)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCEECCCCC-CCCEEEEEC
T ss_conf             899-----99999974487865999855899864553549999999876987996177545342145655-686899966


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-|+|-..+  |.|+.+++.+++.....                    ...|.   +++-+.-|.+...|      ..+
T Consensus       209 TKyl~GHsDvl~G~v~~~~~~~~~l~~~~--------------------~~~G~---~l~P~~a~l~lrGl------~TL  259 (392)
T PRK05967        209 TKYPSGHSDILLGTVSANEKCWPQLLEAH--------------------GTLGL---CAGPDDTYQILRGL------RTM  259 (392)
T ss_pred             CCCCCCCCCCCCCEECCCHHHHHHHHHHH--------------------HHHCC---CCCHHHHHHHHHCC------CHH
T ss_conf             64666887520432337778889999998--------------------75046---67978889987177------609


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      .-|.+||.+++..+-+|+++++.....     ...|.+        -....++|.+.....     .    ....+...|
T Consensus       260 ~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~g~~-----~----~~~~f~~~l  330 (392)
T PRK05967        260 GIRLEHHRKSALEIARWLEGRPMVARVLHPALPSHPGHEIWKRDFSGASGIFSFVLAAGGH-----A----QAHAFLDAL  330 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH-----H----HHHHHHHHC
T ss_conf             9999999998999999997199976897999889944999998566897389999926839-----9----999999828


Q ss_pred             HHCCEEECCCCCCCC----------------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             862828726655676----------------7-505686158889999999999999999999
Q gi|254780153|r  337 EKEEIAYDIGSYRDA----------------P-LGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       337 ~~~g~~~~~~~~r~~----------------~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      .--..+..+|+.++.                . .-+|+|++=    ||++.|++=|+.||..+
T Consensus       331 ~l~~~a~SlGg~eSL~~h~~~~~~~~~~~~~~~~liRlSVGl----Ed~~DLi~DL~qAL~aa  389 (392)
T PRK05967        331 EIFGLGYSWGGYESLALHVKLGDRTVAKNPYAGPVIRLQIGL----EDVPDLKADLERGFAAA  389 (392)
T ss_pred             CCCEEECCCCCCHHEEECCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHH
T ss_conf             716573155770020268889989997479998989999440----99999999999999973


No 72 
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.32  E-value=4e-09  Score=77.40  Aligned_cols=286  Identities=17%  Similarity=0.174  Sum_probs=167.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..|-+..   .+ +..+||-+|+.+++++++++||.+++....||.  +.........+..++.+
T Consensus        62 ~nPT~~~lE~~l---a~LEgg~---~a-~~~sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgT~~l~~~~l~~~Gi~~~~v  134 (399)
T PRK06234         62 GNPTSTEVENKL---ALLEGGE---AA-VVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFV  134 (399)
T ss_pred             CCHHHHHHHHHH---HHHHCCC---EE-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             886799999999---9983997---59-9845889999999999718999899758872048999998865168578862


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CEE--EECCCC-CCEEEEEECC--HHHHCCCCCCCCEEEEEC
Q ss_conf             057776578676785--565799742024202203---203--502568-6148864011--011025455685799970
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DVG--FIPESR-EGLVICDATS--AVFARHIDFNKLDVVTFS  190 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~~--~~~~~~-~~llivD~vS--s~g~~p~d~~~iDv~~a~  190 (391)
                      +.     .+++.++.  .+...+++.||.+--...   +..  .+++++ ++++|||-+=  -+...|++. ++|+++-|
T Consensus       135 d~-----~d~~~~~~ai~~~Tklv~~Etp~NP~l~v~Di~~ia~iA~~~~g~~~vvDNT~atP~~~~Pl~~-GaDivihS  208 (399)
T PRK06234        135 DT-----SNLEEVRNALKANTKVVYLETPANPNLKVTDIKAISNIAHENKECLVFVDNTFCTPYIQRPLQL-GADVVVHS  208 (399)
T ss_pred             CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC-CCCEEEEE
T ss_conf             68-----8969999647888449999789998866148589999876557976872589776144674004-89789982


Q ss_pred             CHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             01200176651--5445677888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r  191 AQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG  268 (391)
Q Consensus       191 sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG  268 (391)
                      .-|-|+|-.-+  |+|+.+++.+.+....          .+..        ..|.   +++-+..|.+...|      ..
T Consensus       209 ~TKyi~GHsD~l~G~v~~~~~~~~~~r~~----------~~~~--------~~G~---~l~p~~a~l~lrGL------~T  261 (399)
T PRK06234        209 ATKYLNGHGDVIAGFVVGKEEFINQVKLF----------GVKD--------MTGS---VIGPFEAFLIIRGM------KT  261 (399)
T ss_pred             CCCEECCCCCCEEEEEECCHHHHHHHHHH----------HHHH--------HCCC---CCCHHHHHHHHCCC------CC
T ss_conf             56310588771546996559999999999----------9887--------0188---68878889986246------74


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCC----C-CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             899999999779999999874797167----6-688200--------365317898247310113734567888999998
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQENDWIEN----L-AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~~~~~~----~-~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      +.-|.+||.+++..+-+|+++++....    - ...|.+        .....+.|.+....      +.    ...+...
T Consensus       262 L~lR~~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~lak~~~~g~gg~~sf~l~~~~------~~----~~~f~~~  331 (399)
T PRK06234        262 LQIRMEKHCKNAMEVAEFLEKHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV------EE----GKVLMNN  331 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------HH----HHHHHHH
T ss_conf             9999999999999999999848984779898988994689999767899963688856979------99----9999981


Q ss_pred             HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676----------------------75-05686158889999999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      |.-...+..+|+.++.                      .. -+|++++=    ||++.|++-|+.||.+.
T Consensus       332 l~lf~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~gi~~~liRlSVGl----Ed~eDLi~DL~qAL~~i  397 (399)
T PRK06234        332 VKLATLAVSLGDAETLIQHPASMTHSPYTAEERAEAGISDGLVRLSVGL----EDVEDIIADLKQALDLI  397 (399)
T ss_pred             CCCCEECCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHHH
T ss_conf             8846430467766330058521257679999999669891969999400----99999999999999986


No 73 
>PRK08362 consensus
Probab=99.32  E-value=1.5e-08  Score=73.72  Aligned_cols=317  Identities=15%  Similarity=0.132  Sum_probs=176.6

Q ss_pred             HHHHHHHHHHHCC-CCCCCCH--HHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             6899998632103-6532898--8999999999999999688998--579997487348999875320578970799707
Q gi|254780153|r   25 PGWSLGILEGALL-GRSHRCV--LGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE   99 (391)
Q Consensus        25 p~~v~~~~~~~~l-~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g   99 (391)
                      |..+.+++...+= +..|-++  -..++-+.+.+.+++-++.+-+  .+|++ +.|++.++..++..++.+||.+++-+=
T Consensus        41 p~~i~~a~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~p~~~i~i-t~G~~~al~~~~~~l~~pGD~Vlv~~P  119 (389)
T PRK08362         41 PQHIKEYAKEALDKGLTHYGPNIGLPELREAIAEKLKKQNGIEADPKKEIMV-LVGANQAFLMGLATFLKDGEEVLIPSP  119 (389)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE-CCCHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             8999999999985587688998570999999999998840999997643998-188699999999997589998998158


Q ss_pred             CHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEE
Q ss_conf             368888876532387630674-057776578676785-----5657997420242022032035-----02568614886
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVIC  168 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~lliv  168 (391)
                      .|..- ...+...+...+.+. ..+.+..+++++++.     .+.+.++.-..-||...+..+.     +|.+++.++|.
T Consensus       120 ~Y~~y-~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~i~~~~k~iil~~P~NPtG~v~s~~~l~~i~~~a~~~~~~ii~  198 (389)
T PRK08362        120 MFVSY-APAVILAGGKPVEVPTYEENEFRLNVDDLKKYVTEKTRALIINSPNNPTGSVLTKKDLEEIADFAVEHDLMVIS  198 (389)
T ss_pred             CCCCH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf             65426-89999749989998545777887699999974544682999848989847463199999999998754957981


Q ss_pred             EECCHHH---H-CCCC---CCC---CEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             4011011---0-2545---568---579997001200176651--54456778887654114457783123200112321
Q gi|254780153|r  169 DATSAVF---A-RHID---FNK---LDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       169 D~vSs~g---~-~p~d---~~~---iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      |-+=+-.   + .+..   .++   --+.+.|.-|.++ -||+  |.++..+..+++....+               .  
T Consensus       199 DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-l~G~RiG~~i~~~~~i~~~~~~~---------------~--  260 (389)
T PRK08362        199 DEVYEHFIYDGVKHYSIASLDGMFERTITVNGFSKTFA-MTGWRLGFVAAPSWVIEKMVKFQ---------------M--  260 (389)
T ss_pred             CCCHHHHCCCCCCCCCHHHCCCCCCCEEEECCCHHHCC-CCCCCEEEEECCHHHHHHHHHHH---------------H--
T ss_conf             46456410189777686660454452023033101016-87653699980899999999999---------------8--


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                            .+..+|+++.-++...+|..-.....++.+.+.++++.+.+++.+...+ +....  |.  +..-+-+.+++..
T Consensus       261 ------~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~--P~--g~~~~w~~~~~~~  329 (389)
T PRK08362        261 ------YNATCPVTFIQYAAAKALRDERSWKAVEEMRKEYDRRRNLVWKRLNEMG-LPTVK--PK--GAFYIFPRIRDTG  329 (389)
T ss_pred             ------HCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEC--CC--EEEEEEEECCCCC
T ss_conf             ------6047886599999999985970479999987889999999999888759-95557--88--2589947888889


Q ss_pred             CCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             0113734567888999998-886282872665-5676750-568615888999999999999999999999
Q gi|254780153|r  317 IASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      ..          ...+... +.+.|+++--|. +...+.+ +|++..  .+++.++.-++.|+.++++.|.
T Consensus       330 ~~----------~~~~~~~ll~e~gV~~~PG~~Fg~~~~~~~Rl~~a--~~~e~l~ea~~RL~~~l~e~k~  388 (389)
T PRK08362        330 LT----------SKEFSELMLKEAKVAVVPGSAFGKAGEGYIRISYA--TAYEKLEEAMDRMEKVLKEKKL  388 (389)
T ss_pred             CC----------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHCCC
T ss_conf             89----------99999999982999998673338899897999971--9999999999999999985569


No 74 
>PRK07678 aminotransferase; Validated
Probab=99.32  E-value=9.9e-09  Score=74.89  Aligned_cols=332  Identities=12%  Similarity=0.028  Sum_probs=172.7

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCCC-EE
Q ss_conf             968999986321036532898899-99999999999996889985799974873489998753205-------7897-07
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYRG-VD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~~-~~   94 (391)
                      +|+ |.+++..++-...|-+..+. ...-+.-+.|.+++  |.++.| |+..||+.|+|+++.=..       .++. ..
T Consensus        65 ~p~-i~~Ai~~q~~~l~~~~~~~~~~~~~~lae~L~~~~--p~~~~v-ff~~SGsEAvE~AiKlAr~y~~~~g~~~r~~i  140 (451)
T PRK07678         65 RKE-LAEAAYEQLQTLSYFPLSQSHEPAIKLAEKLNEWL--GGEYVI-FFSNSGSEANETAFKIARQYHAQKGEPHRYKF  140 (451)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCEE-EECCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             699-99999999975888677534689999999999757--976189-95397389999999999999986099974243


Q ss_pred             EEEECCHHHHHHHHHHHCCC-----------CCEEEEE------CCCCCCCCH------HHC------CCCCCEEEEEEE
Q ss_conf             99707368888876532387-----------6306740------577765786------767------855657997420
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLSL-----------QDVREFT------APYGSLPDF------SKV------DFDRDVVFVWNG  145 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~------~~~g~~~~~------~~~------~~~~~v~~~h~E  145 (391)
                      +...++|=++-..-...-+.           ..+....      .+.+...+.      +.+      +....++.+-.|
T Consensus       141 i~~~~~yHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAaii~E  220 (451)
T PRK07678        141 ISRYRGYHGNTMGALAATGQAQRKYKYEPLAPGFLHVAPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAFIME  220 (451)
T ss_pred             CCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             46267403897234511574310578888888815738984235776665226679999999999875078867999997


Q ss_pred             CC---CCEEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHH
Q ss_conf             24---2022032------0350256861488640110-110--254--5568579997001200176-651544567788
Q gi|254780153|r  146 TT---SGVCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPAS  210 (391)
Q Consensus       146 Ts---tGv~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~a  210 (391)
                      ..   -|+..|.      .+.+|+++++++|+|=|.+ ||-  .-+  +..++.-.+....|+|++= .=++.++.+++.
T Consensus       221 Pi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~gG~~Plsav~~~~ei  300 (451)
T PRK07678        221 PIITGGGILMPPQDYMKAVHEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEI  300 (451)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCEEEEECHHH
T ss_conf             53777882318879867787741245955773224027874566500110595277200133445777761677762989


Q ss_pred             HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             87654114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r  211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN  290 (391)
Q Consensus       211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~  290 (391)
                      .+....   ......             ...++|+.-=|+ ...+..++|+.++++ ++   .++.+++.+.+.+.+...
T Consensus       301 ~~~~~~---~~~~~~-------------~~h~~T~~gnpl-a~aaa~a~L~~l~~~-~l---~~~~~~~g~~l~~~L~~~  359 (451)
T PRK07678        301 YEAFKG---KGEYEF-------------FRHINTFGGNPA-ACALALKNLEIMENE-NL---IERSAQLGSLLLEQLKEE  359 (451)
T ss_pred             HHHHCC---CCCCCC-------------CCCCCCCCCCHH-HHHHHHHHHHHHHCC-CH---HHHHHHHHHHHHHHHHHH
T ss_conf             976357---887666-------------434788987989-999999999998415-09---999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--CCCEEEEECCCCCCHHHH
Q ss_conf             971676688200365317898247310113734567888999998886282872665567--675056861588899999
Q gi|254780153|r  291 DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--APLGLRVWVGVTVEKEDL  368 (391)
Q Consensus       291 ~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--~~~~~RIg~~g~i~~~dv  368 (391)
                      -.-.+.+.+-..+..+...=.+.|+....-   .+......+...+.++|.+++..|...  .+..+|+.--=.++.+++
T Consensus       360 ~~~~p~i~dVRG~GLm~gielv~d~~~~~p---~~~~~~~~i~~~~~~~Glli~~~g~~~~~~~n~lr~~PPL~it~~ei  436 (451)
T PRK07678        360 LGEHPLVGDIRGKGLLVGIELVNDKETKEP---ADNDKVASVVNACKEKGLIIGKNGMTVAGYNNVLTLAPPLCISSEEL  436 (451)
T ss_pred             HHCCCCEEEEEECCEEEEEEEECCCCCCCC---CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCHHHH
T ss_conf             745998888761656899998536655787---99999999999999779888147873257899899978824889999


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999999
Q gi|254780153|r  369 LLLCDWLRWVFYFQK  383 (391)
Q Consensus       369 ~~L~~aLe~~~~~~k  383 (391)
                      +.+++.|+.++.++|
T Consensus       437 d~~~~~l~~al~~v~  451 (451)
T PRK07678        437 AFVVGTLKTAMERIK  451 (451)
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             999999999999639


No 75 
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.32  E-value=1.1e-08  Score=74.53  Aligned_cols=315  Identities=15%  Similarity=0.158  Sum_probs=188.6

Q ss_pred             CCHHHHHHHHHHHCCCC---------CCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             89689999863210365---------328988999-99999999999968899857999748734899987532057897
Q gi|254780153|r   23 KRPGWSLGILEGALLGR---------SHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG   92 (391)
Q Consensus        23 ~~p~~v~~~~~~~~l~~---------sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~   92 (391)
                      +.|. |+++++..+-++         .+-+.++.+ +=.-+.++.+++|+..  | +=+-+-||+.++-++...|++|||
T Consensus        37 ~S~~-v~~a~gS~l~nkYaEG~pg~RyY~G~~~iD~iE~la~~ra~~lF~a~--~-anVqp~SGs~AN~av~~all~PGD  112 (415)
T PRK00011         37 VSPA-VMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKKLFGAE--Y-ANVQPHSGSQANAAVYFALLKPGD  112 (415)
T ss_pred             CCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC--C-CCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             7999-99986472227577889984245665269999999999999983898--6-056778639999999999627898


Q ss_pred             EEEEEE---CC-HHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECC
Q ss_conf             079970---73-688888765323876306740-57776578676785-----565799742024202203--2035025
Q gi|254780153|r   93 VDVLAW---ES-FGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPE  160 (391)
Q Consensus        93 ~~~~~~---g~-~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~  160 (391)
                      .++...   |+ -+.....-+.... .+...+. .+.....|.+++..     .+.+.++-- ++.--..|  ....+++
T Consensus       113 ~im~l~l~~GGHltHg~~~~~~~~~-~~~~~y~~d~~~~~IDyd~~~~~a~~~kPklIi~G~-S~y~r~~d~~~~reIad  190 (415)
T PRK00011        113 TILGMDLAHGGHLTHGSPVNFSGKL-YNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGA-SAYSRPIDFKKFREIAD  190 (415)
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCE-EEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECC-CCCCCCCCHHHHHHHHH
T ss_conf             5876686667876578675544652-478986786434816799999999860998899646-13533128899999999


Q ss_pred             CCCCEEEEEECCHHHH-----CCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             6861488640110110-----25455685799970012001766515445677888765411445778312320011232
Q gi|254780153|r  161 SREGLVICDATSAVFA-----RHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       161 ~~~~llivD~vSs~g~-----~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      +.++++++|+.--.|=     .|=+....|++.++.+|-|-||-| +++..+++..+++...                  
T Consensus       191 ~vgA~l~~D~aHi~GLIA~g~~~~Pl~~ADvvt~tTHKTlrGPrG-GiIl~~~e~~~kId~a------------------  251 (415)
T PRK00011        191 EVGAYLMVDMAHIAGLVAAGVHPNPVPHADVVTTTTHKTLRGPRG-GLILTNEELAKKINSA------------------  251 (415)
T ss_pred             HHCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCHHHHHHHCC------------------
T ss_conf             709889945355666664333799667756885453346789886-0797340666665412------------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS  315 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~  315 (391)
                         .+ ..+-..|-.+.|.++..++.+..+. +.....++..++++.+-+.+...+ +....  -..-+.. +.+.+.+.
T Consensus       252 ---VF-Pg~qggph~h~iAa~Aval~Ea~~~-~f~~Ya~qVv~NAk~La~~L~~~G-~~vv~--ggTdnHl-vlvdl~~~  322 (415)
T PRK00011        252 ---VF-PGIQGGPLMHVIAAKAVAFKEALEP-EFKEYAQQVVKNAKALAEALQERG-FKVVS--GGTDNHL-VLVDLRKK  322 (415)
T ss_pred             ---CC-CCCCCCCHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEEE--CCCCCCE-EEEECCCC
T ss_conf             ---07-5314680477899999999998474-189999999999999999997689-77971--7987744-77645645


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--C--CC--CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHH
Q ss_conf             10113734567888999998886282872665--5--67--67505686158----88999999999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--Y--RD--APLGLRVWVGV----TVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~--r~--~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .+.          -+.....|.+.|+.+.-+.  +  ++  .+.|+|||+--    ...++|+..+.+.|..++..
T Consensus       323 g~~----------G~~a~~~Le~~gI~vNkn~iP~d~~~~~~~SGiRiGt~a~TtrG~~e~em~~ia~~I~~~l~~  388 (415)
T PRK00011        323 GLT----------GKDAEAALEEANITVNKNAIPFDPRSPFVTSGIRIGTPAITTRGFKEAEMEEIAELIADVLDN  388 (415)
T ss_pred             CCC----------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf             688----------999999999859087558798999998888601436788974899889999999999999837


No 76 
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.32  E-value=2e-09  Score=79.25  Aligned_cols=285  Identities=16%  Similarity=0.174  Sum_probs=163.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+=+...    .++.+||-+|..++++ ++.+|+.+++....||.  ++..+.....+..+...
T Consensus        52 ~nPT~~~Le~~l---a~LE~~~~----a~~~~SGmaAi~~~l~-~l~~Gd~vv~~~~~Yg~T~~l~~~~l~~~Gi~~~f~  123 (390)
T PRK08064         52 GNPTREALEDII---AELEGGTK----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFV  123 (390)
T ss_pred             CCHHHHHHHHHH---HHHHCCCC----EEEHHHHHHHHHHHHH-HHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             886699999999---99829976----5502339999999999-867999999848885679999986765098799997


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     ++++++.  .+..-+++.||.+--...+..     .++++++++++||-+  |-+...|+++ ++|+++-|.
T Consensus       124 d~~-----d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~atP~~~~Pl~~-GaDivihS~  197 (390)
T PRK08064        124 DMT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAHGCLTFVDNTFLTPLLQKPLDL-GADVVLHSA  197 (390)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf             885-----73779974788845999978999887412719999999883996997377335043685774-886999963


Q ss_pred             HHCCCCCCCC--EEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             1200176651--5445677-888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG  268 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG  268 (391)
                      -|-++|-..+  |.++.+. +..++.....                    ...|.   +++-+..|.+...|      ..
T Consensus       198 TKyi~Ghsd~l~G~vv~~~~~~~~~~~~~~--------------------~~~G~---~l~p~~a~l~lrgl------~T  248 (390)
T PRK08064        198 TKFLAGHSDVLAGLAVVKDEELAQKLYFLQ--------------------NSFGA---VLGVQDCWLVLRGL------KT  248 (390)
T ss_pred             CCCCCCCCCCCCEEEEECCHHHHHHHHHHH--------------------HHCCC---CCCCHHHHHHHHCC------CC
T ss_conf             631158876404168617889999999999--------------------85077---67905678987256------86


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCC--------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             8999999997799999998747971676-----68820--------0365317898247310113734567888999998
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQENDWIENL-----AVDET--------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~--------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      +.-|.+||.+++..+-+|+++++.....     ...+.        .....+++|.+.+.+           ..+.+...
T Consensus       249 L~lRm~~~~~nA~~iA~~L~~hp~V~~V~yPgL~s~p~h~l~~~~~~g~Gg~~sf~l~~~~-----------~~~~f~~~  317 (390)
T PRK08064        249 LHVRLEHSAATANKIAQYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEE-----------AVRQFVSK  317 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCHH-----------HHHHHHHH
T ss_conf             8899999999999999999719990679898999991499999628997149999989999-----------99999983


Q ss_pred             HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676----------------------75-05686158889999999999999999999998
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      |.--..++.+|+..+.                      .. -+|+++|    .||++.|++-|+.||.+.|..
T Consensus       318 l~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~~~~~Gi~~~liRlSvG----lE~~~DLi~DL~qAL~~i~~~  386 (390)
T PRK08064        318 VKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVG----LENVDDLIADFEQALSYVEEP  386 (390)
T ss_pred             CCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHHHHH
T ss_conf             882622116377444104762246634899999975989394999960----089999999999999973314


No 77 
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.32  E-value=1.2e-08  Score=74.27  Aligned_cols=324  Identities=11%  Similarity=0.012  Sum_probs=171.8

Q ss_pred             HHHHHHHHHHHCCCCCCC-CH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf             689999863210365328-98--899999999999999968899857999748734899987532057897079970736
Q gi|254780153|r   25 PGWSLGILEGALLGRSHR-CV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF  101 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~  101 (391)
                      |..+++++...+-.-.|+ ++  -..++-+.+.+.+++-++.+-+-+=++++.|++.++..++..++++||.+++.+=.|
T Consensus        48 p~~i~~a~~~al~~~~~~Y~~~~G~~eLReAia~~~~~~~g~~v~p~~I~vt~G~~~al~~~~~al~~pGD~Vlv~~P~Y  127 (402)
T PRK06107         48 PDHIKAAAVAAIERGETKYTLVNGTPALRKAIIAKMERRNGLHYADNEICVGGGAKQAIFLALMATLEEGDEVIIPAPYW  127 (402)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             89999999999855999996998889999999999999868999820499868889999999999579999899816866


Q ss_pred             HHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCC-CCEEEEE
Q ss_conf             888887653238763067-4057776578676785-----5657997420242022032035-----02568-6148864
Q gi|254780153|r  102 GLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESR-EGLVICD  169 (391)
Q Consensus       102 ~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~-~~llivD  169 (391)
                      ..-. ..+...++..+.+ .....+..++++.++.     .+.+.++.=..-||...+..+.     ++..+ +.++|.|
T Consensus       128 ~~y~-~~~~~~g~~~~~~p~~~~~~~~~d~d~le~~~~~~tk~iil~~P~NPTG~v~s~~~l~~i~~i~~~~~~i~iisD  206 (402)
T PRK06107        128 VSYP-DMVLANDGTPVIVPCPEEDGFKLTAEALEAAITPRTRWLILNAPSNPTGAAYSRDELRALADVLLRHPHVLVLTD  206 (402)
T ss_pred             CCHH-HHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             5379-999983995673687823487589999997456476699988998989966534899999887752489328622


Q ss_pred             ECCH---HHHCCCC--------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             0110---1102545--------56857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r  170 ATSA---VFARHID--------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       170 ~vSs---~g~~p~d--------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      -+=+   +...+..        +.+--+++.|.-|.++ -||  +|.++..++.+++....+                  
T Consensus       207 EiY~~l~~~~~~~~~~~~~~p~~~~~~i~i~s~SK~~~-~~G~RiG~~v~~~~li~~l~~~~------------------  267 (402)
T PRK06107        207 DIYDHIRFDDEPVTHLLTAAPELRDRVLLTNGVSKTYA-MTGWRIGYAAGPADLIAAINKLQ------------------  267 (402)
T ss_pred             HHHHHHEECCCCCCCHHHHCHHHHCCCEEECCCCCCCC-CCCCEEEEEEECHHHHHHHHHHH------------------
T ss_conf             20255221898888689858244225447424534567-76622689985899999999996------------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE--CC
Q ss_conf             0334786446664488999999998620103189999999977999999987479716766882003653178982--47
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI--VD  314 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~--~d  314 (391)
                           .++...++...-++...+|+.-  +.=++.+.+.++++.+.+.+.+.+.+++....++-.+.-.....-.+  ..
T Consensus       268 -----~~~~~~~~~~~Q~aa~~aL~~~--~~~~~~~~~~y~~rrd~~~~~l~~~~g~~~~~P~g~~y~~~d~~~~~~~~~  340 (402)
T PRK06107        268 -----SQSSSCPSSISQAAAAAALNGD--QSFVAESVKVYKQRRDYALERLNAIPGLSCLVPDGAFYLYVNCAGLIGKTT  340 (402)
T ss_pred             -----HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCC
T ss_conf             -----2434689899999999999688--478999999999999999998875799676279812798130510034458


Q ss_pred             CCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             31011373456788899999-8886282872665567675056861588899999999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      |....  .+.    ..++.. ++.+.|+++--|-.=....-||++..  .+.+.++.-++-|+-+.+..|
T Consensus       341 p~~~~--~~~----~~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~fa--~~~e~L~ea~~Rl~~al~~lr  402 (402)
T PRK06107        341 PEGKV--LET----DTDVVLYLLDSVGVAVVQGTAYGLSPYFRMSIA--TSLETLEAGCDRIERAVAALR  402 (402)
T ss_pred             CCCCC--CCC----HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf             66566--568----899999999858999977853389982999971--999999999999999999649


No 78 
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.31  E-value=5.4e-09  Score=76.54  Aligned_cols=284  Identities=14%  Similarity=0.147  Sum_probs=167.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++.   |..+-+...   . +..+||-+|+.+++++++++|+.+++...-||.  +.........+..+..+
T Consensus        56 ~nPT~~~le~~---la~LEg~~~---a-~~~sSGmaAi~~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~~~~v  128 (386)
T PRK07811         56 GNPTRTALEEQ---LAALEGGKY---G-RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV  128 (386)
T ss_pred             CCHHHHHHHHH---HHHHHCCCC---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEE
T ss_conf             88679999999---999849987---8-9833399999999999838999899378765219999999987358049977


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--565799742024202203---203--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +++.++.  .+...+++.||.+--...   +..  .+++++++++|||-+  +-+...|++ .++|+++-|.
T Consensus       129 d~~-----d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~Pl~-~GaDiVvhS~  202 (386)
T PRK07811        129 DLS-----DLDAVRAAITPRTKLIWVETPTNPLLSITDIAAIAELAHDAGAKVVVDNTFASPYLQQPLA-LGADVVLHST  202 (386)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEECHHH-HCCCEEEEEC
T ss_conf             887-----8788986558883499997799987640585899999985578188316733520425234-0798799734


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-++|-..+  |.++.+++.+...  .          .+.  .     ...|.   +++-+..|.+...|+      .+
T Consensus       203 TKyl~GHsDvl~G~vv~~~~~~~~~--~----------~~~--~-----~~~G~---~~sP~~a~l~lrGL~------TL  254 (386)
T PRK07811        203 TKYIGGHSDVVGGALVTNDEELDEE--F----------AFL--Q-----NGAGA---VPGPFDAYLTMRGLK------TL  254 (386)
T ss_pred             CCEECCCCCCEEEEEEECCHHHHHH--H----------HHH--H-----HHCCC---CCCHHHHHHHHHHHH------HH
T ss_conf             4400578772424786082899999--9----------999--9-----74278---788578889986573------69


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      .-|.+||.+++..+-+|+++++.....     ...|.+        ....+++|.+++..      +.    .+.+...|
T Consensus       255 ~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~Gg~~sf~l~g~~------~~----~~~f~~~L  324 (386)
T PRK07811        255 AVRMDRHSENAEAVAEFLDGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLRGGE------EA----ARDFCART  324 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------HH----HHHHHHHC
T ss_conf             999999999999999999729983779899999993789999867999863489962869------99----99999708


Q ss_pred             HHCCEEECCCCCCCC-------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             862828726655676-------------------75-0568615888999999999999999999
Q gi|254780153|r  337 EKEEIAYDIGSYRDA-------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       337 ~~~g~~~~~~~~r~~-------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .--..+..+|+.++.                   +. -+|++++    .||++.|++-|+.||.+
T Consensus       325 ~lf~~a~SlGg~eSLi~~pa~~th~~~~~~~~~i~~~liRlSVG----lEd~~DLi~Dl~qAL~~  385 (386)
T PRK07811        325 KVFTLAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVG----IEDVADLLADLEQALGK  385 (386)
T ss_pred             CCCEEEECCCCCCHHEECCCCCCCCCCCHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHC
T ss_conf             91626578775523004875466311597763999496999760----08999999999999824


No 79 
>PRK06917 hypothetical protein; Provisional
Probab=99.30  E-value=2.5e-08  Score=72.37  Aligned_cols=335  Identities=13%  Similarity=0.070  Sum_probs=174.6

Q ss_pred             CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCC-CE
Q ss_conf             9689999863210--365328988999999999999999688998579997487348999875320------5-789-70
Q gi|254780153|r   24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYR-GV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~-~~   93 (391)
                      +|+ |.+++.+++  +...|++.-..+...+.-+.|.+++.  .+..-+++..|||.++|+++.=.      - .++ ..
T Consensus        49 ~p~-i~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p--~~~~~~~f~~SGsEAvE~AiKlA~~y~~~r~~t~r~~  125 (447)
T PRK06917         49 VKE-IADVIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANETAMKIAIQHWQERGIQGKHK  125 (447)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             799-9999999985388736664245899999999998578--8878799628789999999999999999838999848


Q ss_pred             EEEEECCHHHHHHHHHHHCC---------C--CCEEEEECCC------CCCCC------HHHCC------CCCCEEEEEE
Q ss_conf             79970736888887653238---------7--6306740577------76578------67678------5565799742
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLS---------L--QDVREFTAPY------GSLPD------FSKVD------FDRDVVFVWN  144 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~---------~--~~~~~~~~~~------g~~~~------~~~~~------~~~~v~~~h~  144 (391)
                      ++...++|=++...-..--+         .  .+......|+      ....+      .++++      ....++.+-.
T Consensus       126 Iis~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~  205 (447)
T PRK06917        126 ILSRWMSYHGITMGALSMSGHPLRRQRFVSILEDYPTISAPYCYRCPVQKVYPTCQLACATELERSIERIGAEHIAAFIA  205 (447)
T ss_pred             EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             99950551466660366238821147878878897744898655777776540358999999999999738877469997


Q ss_pred             ECCCC----EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf             02420----22032------0350256861488640110-110--254--5568579997001200176-6515445677
Q gi|254780153|r  145 GTTSG----VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP  208 (391)
Q Consensus       145 ETstG----v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~  208 (391)
                      |...|    +..|.      ...+|+++++++|+|=|.+ ||-  .-+  +.+++.=.+...-|+|++= .=++.++.++
T Consensus       206 EPi~g~~Gg~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDii~~gK~l~gG~~Pl~av~~~~  285 (447)
T PRK06917        206 EPIIGAAGGAVVPPKGYYKVIKDICSHYDILFIADEVMTGLGRTGAWFAMEHWGVEPDIMTLGKGLGAGYTPMAATVVSD  285 (447)
T ss_pred             CCCEECCCCCEECCHHHHHHHHHHHHHCCCEEEEEECEECCCCCCCCCHHHHCCCCCCEEEECHHHCCCCCCEEEEEECH
T ss_conf             13030579716468789999999965269528974110078756874315335989778977401118987738998818


Q ss_pred             HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r  209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ  288 (391)
Q Consensus       209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~  288 (391)
                      +..+.....  ..                ....++|+.--|+ ...+..++|+.+++++    ..+|.+++.+.+.+.+.
T Consensus       286 ~i~~~~~~g--~~----------------~~~~g~Tf~gnpl-a~aaa~a~L~~l~~~~----l~~~~~~~G~~l~~~L~  342 (447)
T PRK06917        286 RVMEPILRG--SR----------------SVMSGHTLSANPL-SAATALAVIEYMEKHN----LPEKTAEKGEYLIKGLQ  342 (447)
T ss_pred             HHHHHHCCC--CC----------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHH
T ss_conf             988654058--87----------------6201778989999-9999999999998645----99999999999999999


Q ss_pred             HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC--C-CCCCCCEEEEECCCCCCH
Q ss_conf             4797167668820036531789824731011373456788899999888628287266--5-567675056861588899
Q gi|254780153|r  289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIG--S-YRDAPLGLRVWVGVTVEK  365 (391)
Q Consensus       289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~-~r~~~~~~RIg~~g~i~~  365 (391)
                      .+..-.+++.+-.-+..+...-.+.|..... ...........+.....++|.++...  + ....+..+|+.--=.++.
T Consensus       343 ~l~~~~~~i~dVRG~GLm~giel~~d~~~~~-~~~~~~~~a~~i~~~~~~~Gll~~~~~~~~~g~~~~~lrl~PPL~it~  421 (447)
T PRK06917        343 EVQQQSTIIGDVRGKGLLIGVEFVADQKTKK-PFPQPFSKASELISVAAKNGLLLYPAVSGQAGKEGSALLIAPPMTTTY  421 (447)
T ss_pred             HHHHCCCCEEEEEECCEEEEEEEECCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCCH
T ss_conf             9986399778765156169999842665567-787248999999999997898898744567789999899979922789


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999998
Q gi|254780153|r  366 EDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       366 ~dv~~L~~aLe~~~~~~k~~  385 (391)
                      ++|+.+++.|+.++.++-.+
T Consensus       422 ~eid~~i~~l~~al~ev~~~  441 (447)
T PRK06917        422 SELDELLSIFAKSVEEMMQK  441 (447)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999983


No 80 
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.30  E-value=3.8e-09  Score=77.53  Aligned_cols=286  Identities=17%  Similarity=0.157  Sum_probs=167.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++.   |..+-+..   .++ +.+||-+|+.+++++++++|+.+++....||.  +++....+..+.++...
T Consensus        51 ~nPT~~~le~~---la~LEg~~---~a~-~~~SGmaAis~~~l~ll~~Gd~iv~~~~~Yg~T~~l~~~~l~~~gi~~~~~  123 (388)
T PRK08861         51 GNPNRGLLEQA---LSELESGK---GAV-VTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVLFV  123 (388)
T ss_pred             CCHHHHHHHHH---HHHHHCCC---CEE-EECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf             88659999999---99984998---379-963789999999998368999899868985506899998986288699998


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC--EE---EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--5657997420242022032--03---502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD--VG---FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~--~~---~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.+.++.  .+...+++.||.+--...+  .+   .++++++++++||-+  +-+...|++ .++|+++-|.
T Consensus       124 d~~-----d~~~~~~~i~~~Tkli~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atP~~~~Pl~-~GaDivvhS~  197 (388)
T PRK08861        124 DQS-----DAAALDAALAKKPKLILLETPSNPLVRVVDIAEVCQKAKQVGALVAVDNTFLTPVLQKPLE-LGADFVIHST  197 (388)
T ss_pred             CCC-----CCHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCHHHHCCCHH-CCCCEEEEEC
T ss_conf             999-----8278997348785399984489998366565999999987399599978851253037210-3887899962


Q ss_pred             HHCCCCCCCC--EEEEECHHHH-HHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             1200176651--5445677888-765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASV-ERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG  268 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG  268 (391)
                      -|-++|-..+  |.|+.+.+.+ ++...            +   .     ...|.   +++-+..|.+...|      ..
T Consensus       198 TKyi~GHsDvlgG~vv~~~~~~~~~l~~------------~---~-----~~~G~---~~sP~~a~l~~RGL------~T  248 (388)
T PRK08861        198 TKYINGHSDVIGGVLITKTKEHAEELAW------------W---G-----NCIGA---TGTPFDSYMTLRGI------RT  248 (388)
T ss_pred             CCCCCCCCCCCCEEEEECCHHHHHHHHH------------H---H-----HHCCC---CCCHHHHHHHHCCC------CC
T ss_conf             4012588875021895074888899999------------9---9-----85177---78867778885478------97


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCC--------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             8999999997799999998747971676-----68820--------0365317898247310113734567888999998
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQENDWIENL-----AVDET--------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~--------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      +.-|.+|+.+++..+-+|+++++.....     ...|.        ......+.|.+.+..      +    ....+...
T Consensus       249 L~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~lak~~~~g~ggm~sf~l~~~~------~----~~~~f~~~  318 (388)
T PRK08861        249 LGARMRVHEESAQEILKYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSF------E----QLKVFVKA  318 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------H----HHHHHHHH
T ss_conf             8899999998699999999849992789898999992699998645698626999977989------9----99999983


Q ss_pred             HHHCCEEECCCCCCCCC-----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88628287266556767-----------------------50568615888999999999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDAP-----------------------LGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~~-----------------------~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      |.--..++.+|++++.-                       .-+|+++|    .||++.|++=|+.|+++.+.
T Consensus       319 l~lf~~a~SlGg~eSLi~~p~s~sh~~~~~~~~~~~gi~~~liRlsVG----lEd~eDLi~Dl~qAL~~a~~  386 (388)
T PRK08861        319 LKLFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG----LEDAQDLIADLKQAFAKAAE  386 (388)
T ss_pred             CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHHHH
T ss_conf             880533116687750213775455411899999866989496999942----19999999999999999875


No 81 
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.30  E-value=7.8e-09  Score=75.55  Aligned_cols=308  Identities=17%  Similarity=0.129  Sum_probs=176.0

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC-EEEEEECCH
Q ss_conf             96899998632103653289889-9999999999999968899857999748734899987532057897-079970736
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG-VDVLAWESF  101 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~-~~~~~~g~~  101 (391)
                      +|+ |.+++..++-...|-+..| .+...+.-+.|.+++..++..+|+| ..||+.++|+++.=--..+. .++...++|
T Consensus        61 ~p~-i~~ai~~q~~~l~~~~~~~~~~~~~~lae~L~~~~~~~~~~kvff-~~SGsEA~E~AlKlAr~tgr~~Iis~~~sY  138 (398)
T PRK03244         61 HPA-VVEAVTRQLATLGHVSNLFATEPQIALAERLVALLGAPEGARVFF-CNSGAEANEAAFKLARLTGRTKIVAAEGGF  138 (398)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             899-999999999754777565358699999999998608996567997-186778999999999982998799983877


Q ss_pred             HHHHHHHHHHCCCC---------CEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECCE------EEECCCCC
Q ss_conf             88888765323876---------3067405777657867678556579974202420---220320------35025686
Q gi|254780153|r  102 GLGWMSDIRQLSLQ---------DVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPDV------GFIPESRE  163 (391)
Q Consensus       102 ~~r~~~~~~~~~~~---------~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~~------~~~~~~~~  163 (391)
                      =++......--+..         ...+...|++....++.. ....++.+-.|...|   +..|..      ..+|+.++
T Consensus       139 HG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~-~~~~iAAii~EPiqg~gG~~~~~~~fl~~l~~lc~~~g  217 (398)
T PRK03244        139 HGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAA-VDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHG  217 (398)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH-HCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             68876542336885312346788787277157866899997-38985899985876889985688889999999985734


Q ss_pred             CEEEEEECCHHHHCCCCC-----CCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             148864011011025455-----685--7999700120017665154456778887654114457783123200112321
Q gi|254780153|r  164 GLVICDATSAVFARHIDF-----NKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       164 ~llivD~vSs~g~~p~d~-----~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      .++|+|=|.+=.++-=.+     .++  |++..|  |+|++===++.++.+++..+..   .                  
T Consensus       218 illI~DEV~tGfGRtG~~fa~e~~~v~PDIv~~g--K~lggG~P~sa~~~~~~~~~~~---~------------------  274 (398)
T PRK03244        218 ALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLA--KGLGGGLPIGACLAFGPAADLL---T------------------  274 (398)
T ss_pred             CCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEC--CCCCCCCCCEEEEECHHHHHHC---C------------------
T ss_conf             5366662124877667861565337999889973--2024887616889718888641---7------------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789-82473
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDS  315 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~  315 (391)
                       ....++|+.--|+ ...+..++|+.+++++    +.++.+++.+.+.+.++...  .+++.  +.|......- .+.. 
T Consensus       275 -~~~h~~T~~gnpl-~~aaa~a~L~~i~~~~----l~~~v~~~g~~l~~~L~~l~--~~~i~--~VRG~Gl~~giel~~-  343 (398)
T PRK03244        275 -PGLHGSTFGGNPV-ACAAALAVLRVIADEG----LLENAERLGKQLRAGIEALG--HPLVD--HVRGRGLLLGIVLTA-  343 (398)
T ss_pred             -CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHCC--CCCEE--EEEEEEEEEEEEECC-
T ss_conf             -8876747898989-9999999999997557----99999999999999998548--98614--100126899999667-


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             10113734567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                             +    ..+.+...+.+.|.++...+    ++.+|+.--=.++.++++.+++.||.++.++-
T Consensus       344 -------~----~~~~~~~~~~~~Gll~~~~g----~n~ir~~PPl~it~~eid~~~~~l~~~L~~~a  396 (398)
T PRK03244        344 -------P----VAKAVEAAAREAGFLVNAPA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA  396 (398)
T ss_pred             -------C----HHHHHHHHHHHCCCEECCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             -------3----19999999996891993189----99799949957899999999999999999985


No 82 
>PRK07212 consensus
Probab=99.30  E-value=2.1e-08  Score=72.79  Aligned_cols=306  Identities=13%  Similarity=0.084  Sum_probs=165.2

Q ss_pred             HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             689999863210----365328988999999999999999688998-579997487348999875320578970799707
Q gi|254780153|r   25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE   99 (391)
Q Consensus        25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g   99 (391)
                      |..+++++.+.+    .++++ +.-..++-+.+.+.+++-++.+=+ .+|++ +.|++.++..++..++++||.+++..=
T Consensus        46 p~~i~ea~~~~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~v~p~~I~v-t~G~~~al~~~~~~l~~pGD~Vlv~~P  123 (378)
T PRK07212         46 PKHICDAAIDAMDRGKTHYAP-SNGIPELREAIAEKLRTENHIDVTPDDVIV-TPGAKQAIYEAMMAVLDDGDEVILLDP  123 (378)
T ss_pred             CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEEE-ECCHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             899999999998579998899-999999999999999998489987331999-478999999999984799898998179


Q ss_pred             CHHHHHHHHHHHCCCCCEEEEE--CCCCCCCC-HHH-C-CCCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEE
Q ss_conf             3688888765323876306740--57776578-676-7-855657997420242022032035-----025686148864
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQDVREFT--APYGSLPD-FSK-V-DFDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICD  169 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~-~~~-~-~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD  169 (391)
                      .|..-. ..+...+ ..+..+.  ...+..++ +++ + +..+.+.++.=..-||...+..+.     +|..++..+|.|
T Consensus       124 ~Y~~y~-~~~~~~g-~~~v~vpl~~~~~~~~~~l~~~i~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~la~~~~~~ii~D  201 (378)
T PRK07212        124 AWVSYE-ACIKFAG-GKPVWVPLNPEDFQLPDDLAEAITDKTKLIVVNSPSNPTGAVFGKESLQGVADLAVDHDLYVLSD  201 (378)
T ss_pred             CCCCHH-HHHHHCC-CEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCC
T ss_conf             634256-8999719-96999835556785289999856657829998899799898847176889999777424501330


Q ss_pred             ECCH---HHHCCCCC---CC---CEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf             0110---11025455---68---57999700120017665--15445677888765411445778312320011232103
Q gi|254780153|r  170 ATSA---VFARHIDF---NK---LDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG  238 (391)
Q Consensus       170 ~vSs---~g~~p~d~---~~---iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (391)
                      -+=+   ++..+...   .+   --+.+.|.-|.++ .||  +|.++.+++.+++.....                    
T Consensus       202 EiY~~l~~~~~~~~~~~l~~~~~~~i~~~S~SK~~~-l~GlRvG~~~~~~~~i~~~~~~~--------------------  260 (378)
T PRK07212        202 EIYEKIIYGKEHISLGSLDGMADRTITINGFSKAYA-MTGWRLGYLTAPEEIIKQMGKVQ--------------------  260 (378)
T ss_pred             CCHHHHHCCCCCCCHHHCCCCCCCCCEECCCCCCCC-CCCEEEEEEECCHHHHHHHHHHH--------------------
T ss_conf             011544048877774334454555403335421367-77604898973999999999998--------------------


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf             34786446664488999999998620103189999999977999999987479716766882003653178982473101
Q gi|254780153|r  239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA  318 (391)
Q Consensus       239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~  318 (391)
                         ..+...++.+..++...+++.-.  .-++.+.++.+++.+.+.+.+...+ +....  ++  +..-+-+.++.    
T Consensus       261 ---~~~~~~~~~~~q~aa~~al~~~~--~~l~~~~~~~~~~r~~l~~~L~~~g-~~~~~--p~--g~~~~~~~~~~----  326 (378)
T PRK07212        261 ---SHSVSSATTFVQYGGVAALKGPQ--DCVEEMRDEFEARRDILIDGLADMG-LECAP--PD--GAFYAFPNVDG----  326 (378)
T ss_pred             ---HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CC--EEEEEEEECCC----
T ss_conf             ---64557887699999999996877--8899999999999999999999769-86626--88--16999997899----


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             1373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                        +   ...+   ....+.+.|+++.-|..=..+.-+|++...  ++++++.-++-|+.++
T Consensus       327 --~---~~~~---~~~ll~~~gV~v~pG~~Fg~~g~iRl~~a~--~~e~l~eal~RL~~~L  377 (378)
T PRK07212        327 --D---DTAV---AERLLKDAHVAVTPGSAFGAPGWIRISYAT--SMERLKEALERLEKVL  377 (378)
T ss_pred             --C---HHHH---HHHHHHHCCEEEEECCCCCCCCEEEEEEEC--CHHHHHHHHHHHHHHH
T ss_conf             --9---9999---999997098999817445999939999808--9999999999999985


No 83 
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.29  E-value=5.1e-09  Score=76.74  Aligned_cols=285  Identities=16%  Similarity=0.154  Sum_probs=164.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+=+..    -.+..+||-+|+.+++++++++||.+++...-||.-  ..+......+.+++.+
T Consensus        63 ~NPT~~~lE~~l---a~LEg~~----~a~~~~SGmaAi~~~lla~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gi~~~~v  135 (397)
T PRK07504         63 SNPTVDMFEKRM---CALEGAE----DARATASGMAAVTAAILCQLKAGDHVVAARALFGSCRYVVETLLPRYGIESTLV  135 (397)
T ss_pred             CCHHHHHHHHHH---HHHHCCC----EEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             886499999999---9982998----598734499999999998558999898558875569999999986078589987


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--565799742024202203---203--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     ++++++.  .+..-+++.||.+--...   +..  .+++.+++++|||-+  +-+...|++. ++|+++-|.
T Consensus       136 d~~-----d~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDiVvhS~  209 (397)
T PRK07504        136 DGL-----DLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAEIANQAGAKLVVDNVFATPLFQKPLEL-GAHIVVYSA  209 (397)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf             898-----85889974587753999854899974513719999999982995997366221112684562-888799742


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-|+|-.-+  |+|+.+++.+.+..              ..+..     ..|.   +++-+.-|.+...|      ..+
T Consensus       210 TKyi~GHsDvlgGvv~~~~~~~~~~~--------------~~~~~-----~~G~---~~~p~~a~l~lRGL------~TL  261 (397)
T PRK07504        210 TKHIDGQGRCLGGVVLSDKAWIEEHL--------------QDYFR-----HTGP---SLSPFNAWVLLKGL------ETL  261 (397)
T ss_pred             CCCCCCCCCEEEEEEECCHHHHHHHH--------------HHHHH-----HCCC---CCCHHHHHHHHCCC------CCH
T ss_conf             52125887625469955589999999--------------99999-----7188---78837889987167------729


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676688200--------------365317898247310113734567888999998
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      .-|.+||.+++..+-+|+++++..... ..|..              .....+.|.++...      +..    ..+...
T Consensus       262 ~lRm~r~~~nA~~iA~~L~~hp~V~~V-~yPgl~s~p~~~~a~k~~~g~gg~~sf~l~~~~------~~~----~~f~~~  330 (397)
T PRK07504        262 AVRVRQQTESAAAIADFLAGHPKVARV-IYPGRADHPQADIVAKQMTGGSTLVAFELKGGK------EAA----FRFLNA  330 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCH------HHH----HHHHHC
T ss_conf             999999999999999999738995579-798987782788999857998524589982889------999----999980


Q ss_pred             HHHCCEEECCCCCCCC----------------------CCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676----------------------750-56861588899999999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA----------------------PLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~----------------------~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      |.--..+..+|+..+.                      ..+ +|+++|    .||++.|++-|+.||++.|
T Consensus       331 L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~lvRlSVG----lEd~eDLi~Dl~~AL~~ir  397 (397)
T PRK07504        331 LKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFIRLSAG----LEDTDDLIEDLEAALKKVR  397 (397)
T ss_pred             CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHCC
T ss_conf             891522226787650323764234311899999866979295999960----0899999999999998529


No 84 
>PRK07543 consensus
Probab=99.29  E-value=8.5e-09  Score=75.31  Aligned_cols=318  Identities=10%  Similarity=0.025  Sum_probs=163.6

Q ss_pred             HHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             689999863210365328---988999999999999999688998-5799974873489998753205789707997073
Q gi|254780153|r   25 PGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES  100 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~  100 (391)
                      |..+++++.+.+-.-.|+   +.-..++-+.+.+.+++-++.+-+ -+|++ +.|++.++..++..++.+||.+++.+=.
T Consensus        46 p~~i~~a~~~al~~~~~~Y~~~~G~~eLR~aia~~~~~~~g~~~~pd~V~v-t~G~~~al~~~~~al~~pGD~Vlv~~P~  124 (400)
T PRK07543         46 PDNIKQAAIAAINAGKTKYTAVDGIPELKQAICAKFKRENGLDYKPEQVIV-GTGGKQILYNALMATLNPGDEVIIPAPY  124 (400)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             999999999998459998989988099999999999998489988042899-2782699999999857999989982786


Q ss_pred             HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCC-CCEEEE
Q ss_conf             68888876532387630674-057776578676785-----5657997420242022032035-----02568-614886
Q gi|254780153|r  101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESR-EGLVIC  168 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~-~~lliv  168 (391)
                      |..-. ..+...++..+.+. ....|..+++++++.     .+.+.+++=..-||...+..+.     ++..+ +.++|.
T Consensus       125 Y~~y~-~~~~~~g~~~v~v~~~~e~~~~~d~~~le~~i~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~~~~~~~v~iis  203 (400)
T PRK07543        125 WVSYP-EMVALAGGTPVFVETTAEFGFKLTPEALEAAITPKTKWFIFNSPSNPTGAAYTRAELKALTDVLVKHPHVWVLT  203 (400)
T ss_pred             CCCCH-HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECC
T ss_conf             65536-89998088359952463337543847789747866719998799898883764167899999888753860313


Q ss_pred             EECCHH---HHCC------CCCCCCE--EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             401101---1025------4556857--999700120017665--15445677888765411445778312320011232
Q gi|254780153|r  169 DATSAV---FARH------IDFNKLD--VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       169 D~vSs~---g~~p------~d~~~iD--v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      |-+=+-   ...+      ++....|  +.+.|.-|.++ -||  +|.++..++.+++.....                 
T Consensus       204 DEiY~~l~~~~~~~~~~~~~~p~~~~~~i~~~s~SK~~~-~~G~RiG~~~~p~~li~~~~~~~-----------------  265 (400)
T PRK07543        204 DDMYEHLVYDDFVFTTPAQVEPSLYDRTLTMNGVSKAYA-MTGWRIGYAAGPAELIKAMDTIQ-----------------  265 (400)
T ss_pred             HHHHHHHHCCCCCCCCHHHCCHHHHCCCCCCCCCCHHCC-CCCCCEEEEECCHHHHHHHHHHH-----------------
T ss_conf             124566414897889967829022103420377405206-83430488867899999999999-----------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC--
Q ss_conf             103347864466644889999999986201031899999999779999999874797167668820036531789824--
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV--  313 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~--  313 (391)
                            ..+...++...-++...+|+.-.  .=++...+.++++.+.+.+.+....++....++-.+.    +-..+.  
T Consensus       266 ------~~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rrd~~~~~L~~~~g~~~~~P~g~fy----~~~~~~~~  333 (400)
T PRK07543        266 ------SQSTSNPCSIAQWAAVEALNGPQ--DFIPANKKIFQERRDLVVSMLNQAKGIDCPTPEGAFY----VYPSCAGL  333 (400)
T ss_pred             ------HHHCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE----EEECCHHH
T ss_conf             ------75046766099999999985859--9999999999999999999998677984679986689----82110323


Q ss_pred             ----CCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             ----731011373456788899999-888628287266556767505686158889999999999999999999
Q gi|254780153|r  314 ----DSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       314 ----d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                          .|.....  ...    .++.. ++.+.|+++--|..=..+..||++..  .++++++.-++-|+-..++.
T Consensus       334 ~~~~~p~~~~~--~~~----~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~~a--~~~e~l~ea~~Rl~~f~~~l  399 (400)
T PRK07543        334 IGKTTPSGKVI--ETD----EDFVTELLETEGVAVVHGSAFGLGPNFRISYA--TSDELLEEACKRIQRFCASL  399 (400)
T ss_pred             HHCCCCCCCCC--CCH----HHHHHHHHHHCCEEEECCCCCCCCCCEEEEEC--CCHHHHHHHHHHHHHHHHHC
T ss_conf             20037556767--999----99999999849999984701089999899975--98999999999999999965


No 85 
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.29  E-value=7.6e-09  Score=75.63  Aligned_cols=319  Identities=16%  Similarity=0.128  Sum_probs=168.7

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             96899998632103653289889--999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|+ |.+++.+++=...|-+..+  .+...+.-+.|.+++.  .+..-+++..|||.++|+++.=..  ..+..++...+
T Consensus        54 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGsEA~e~AiklAr~~t~r~~ii~~~~  130 (413)
T cd00610          54 HPE-VVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEG  130 (413)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             889-9999999997489725786688899999999998569--9848799818777999999999999739988999868


Q ss_pred             CHHHHHHHHHHHCC---------C--CCEEEEECCCCC------CCCHHHCC-----CCCCEEEEEEECCCC---EEECC
Q ss_conf             36888887653238---------7--630674057776------57867678-----556579974202420---22032
Q gi|254780153|r  100 SFGLGWMSDIRQLS---------L--QDVREFTAPYGS------LPDFSKVD-----FDRDVVFVWNGTTSG---VCVPD  154 (391)
Q Consensus       100 ~~~~r~~~~~~~~~---------~--~~~~~~~~~~g~------~~~~~~~~-----~~~~v~~~h~ETstG---v~~~~  154 (391)
                      +|=++...-...-+         .  .++..+..+...      ..+++.++     ....++.+-.|...|   +..|.
T Consensus       131 ~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~l~~~~~~~~~~iAavi~EPi~g~~G~~~~~  210 (413)
T cd00610         131 AYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPP  210 (413)
T ss_pred             CCCCCCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
T ss_conf             84787663344137832245778888996680898765554322778999999997389978999997987889987388


Q ss_pred             ------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf             ------0350256861488640110-110--254--55685799970012001766515445677888765411445778
Q gi|254780153|r  155 ------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL  223 (391)
Q Consensus       155 ------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~  223 (391)
                            ...+|+++++++|+|=|.+ ||-  .-+  +.+++.-.+...-|+|++===+|.++.+++..+....   . . 
T Consensus       211 ~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~lggG~Pisav~~~~~i~~~~~~---~-~-  285 (413)
T cd00610         211 PGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPA---G-P-  285 (413)
T ss_pred             HHHHHHHHHHEEECCCEEEEEECEECCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHC---C-C-
T ss_conf             8997888632860580698520200777545431233258178756523345688986047775999998633---8-8-


Q ss_pred             CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             31232001123210334786446664488999999998620103189999999977999999987479716766882003
Q gi|254780153|r  224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR  303 (391)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r  303 (391)
                                     ...++|+.--|+ ...+..++|+.+++++    ..++.+++.+.+.+.+.+...-.+++.+  .|
T Consensus       286 ---------------~~h~~T~~gnp~-~~Aaa~a~L~~i~~e~----l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vr  343 (413)
T cd00610         286 ---------------GLHGGTFGGNPL-ACAAALAVLEVLEEEG----LLENAAELGEYLRERLRELAEKHPLVGD--VR  343 (413)
T ss_pred             ---------------CEECCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEE--EE
T ss_conf             ---------------506778888849-9999999999984256----9999999999999999999974899369--64


Q ss_pred             CCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             65317-89824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  304 SNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       304 S~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      ..... .+.+.++....   .........+...+.++|+++...+    +..+|+.---.++.+||+.++++||.++
T Consensus       344 G~Gl~~gie~~~~~~~~---~~~~~~~~~i~~~~~~~Gvl~~~~g----~~~l~~~Ppl~it~~eid~~~~~l~~aL  413 (413)
T cd00610         344 GRGLMIGIELVKDRATK---PPDKELAAKIIKAALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL  413 (413)
T ss_pred             EECEEEEEEEECCCCCC---CCCHHHHHHHHHHHHHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             32449999993687767---7589999999999997994891179----9989997883689999999999999869


No 86 
>PRK07481 hypothetical protein; Provisional
Probab=99.29  E-value=3.4e-09  Score=77.86  Aligned_cols=334  Identities=13%  Similarity=0.075  Sum_probs=167.7

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH--HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC------C-CC-C
Q ss_conf             968999986321036532898--89-999999999999996889985799974873489998753205------7-89-7
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV--LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL------G-YR-G   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~--~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~------~-~~-~   92 (391)
                      +|+ |.+++.+++=...|-+.  .| .+...+.-+.|.+++. |.+..-+++..||+.++|+++.=..      + ++ .
T Consensus        60 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-p~~~~rv~f~~SGseA~E~AiKlAr~y~~~~g~~~r~  137 (448)
T PRK07481         60 REE-VKEAIVRQLDELEYYSTFDGTTHPRAIELSYKLIDMFE-PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERT  137 (448)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             799-99999999965677136664468899999999998518-7787889974977999999999999999971898863


Q ss_pred             EEEEEECCHHHHHHHHHHHCC-----------CCCEEEEEC------CCCCCCC------HHHC------CCCCCEEEEE
Q ss_conf             079970736888887653238-----------763067405------7776578------6767------8556579974
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLS-----------LQDVREFTA------PYGSLPD------FSKV------DFDRDVVFVW  143 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~-----------~~~~~~~~~------~~g~~~~------~~~~------~~~~~v~~~h  143 (391)
                      .++...++|=++-..-..--+           ...+.....      |++..++      .+.+      .....++.+-
T Consensus       138 ~Ii~~~~syHG~t~g~~s~sg~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi  217 (448)
T PRK07481        138 KFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTQDPEELGRLCARLLEREIAFQGPDTIAAFI  217 (448)
T ss_pred             EEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             69963686377662212146884344688899998278268752237778998999999999999998741888479999


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf             202420---22032------035025686148864011011025---4--5568579997001200176-6515445677
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP  208 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~  208 (391)
                      .|...|   +..|.      ...+|+++++++|+|=|.+=.++-   +  +.+++.-.+...-|+|++= .=++.++.++
T Consensus       218 ~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~lggG~~Plsa~~~~~  297 (448)
T PRK07481        218 AEPVQGAGGVIVPPANYWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGISSGYVPLGATMVNA  297 (448)
T ss_pred             EECCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHCCH
T ss_conf             60466679714599999999999999779279995145388847632576568999971001224358977642111568


Q ss_pred             HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r  209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ  288 (391)
Q Consensus       209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~  288 (391)
                      +..+.........               .....++|+..=|+ ...+...+|+.+++++=+++..++-+...+.+.+..+
T Consensus       298 ~i~~~~~~~~~~~---------------~~~~hg~T~~gnpl-a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~  361 (448)
T PRK07481        298 RIEDAFEANADFG---------------GAIMHGYTYSGHPV-ACAAALASLDIVVREDLPANAAKRGAYLLEGLQPLVE  361 (448)
T ss_pred             HHHHHHCCCCCCC---------------CCCCCCCCCCCCHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999765688766---------------52100667788979-9999999999997556999999999999999999998


Q ss_pred             HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf             47971676688200365317898247310113734567888999998886282872665567675056861588899999
Q gi|254780153|r  289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL  368 (391)
Q Consensus       289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv  368 (391)
                      ++    +.+.+-..+..+...-.+.|..... ..+........+...+.++|+++..     .|..+|+.--=.++.+|+
T Consensus       362 ~~----~~i~~VRG~Glm~~ielv~d~~~~~-~~~~~~~~~~~v~~~~~~~Gll~~~-----~g~~i~~~PpL~it~~ei  431 (448)
T PRK07481        362 RF----ELVGDVRGKGLMVALDLVADKATRA-PIDPSKGYANAVADVARENGVLVRP-----SGTKIILSPPLVIQREDV  431 (448)
T ss_pred             HC----CCEEEEEECCEEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHHHH
T ss_conf             48----9846755224999999960665567-6771279999999999969949972-----499899989978899999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999998
Q gi|254780153|r  369 LLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       369 ~~L~~aLe~~~~~~k~~  385 (391)
                      +.++++||.+++++-.|
T Consensus       432 d~~l~~l~~al~~v~~~  448 (448)
T PRK07481        432 DRIVDALDAGFAAVPFQ  448 (448)
T ss_pred             HHHHHHHHHHHHHHCCC
T ss_conf             99999999999975339


No 87 
>PRK07482 hypothetical protein; Provisional
Probab=99.29  E-value=3e-08  Score=71.83  Aligned_cols=337  Identities=12%  Similarity=0.026  Sum_probs=173.0

Q ss_pred             CHHHHHHHHHHHCC--CCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CCCC-C-C
Q ss_conf             96899998632103--653289889-9999999999999968899857999748734899987532------0578-9-7
Q gi|254780153|r   24 RPGWSLGILEGALL--GRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LLGY-R-G   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l--~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~~~-~-~   92 (391)
                      +|+ |.+++.+++-  ...|....+ .+...+.-+.|.+++... -.+|+| ..|||.++|+++.=      ..+. + .
T Consensus        68 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~-l~~v~f-~~SGSEAvE~AiKlAr~y~~~~g~~~r~  144 (461)
T PRK07482         68 RTE-VAEAIAEQAKELAYYHTYVGHGTEASIELSKRIIDRAPAG-MSKVYY-GLSGSDANETQIKLVWYYNNVLGRPEKK  144 (461)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCEEEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             499-9999999996587611467756889999999999757888-687996-1866999999999999998861887654


Q ss_pred             EEEEEECCHHHHHHHHHHHCC-----------CCCEEEEECCC-------CCCCC------HHHCC------CCCCEEEE
Q ss_conf             079970736888887653238-----------76306740577-------76578------67678------55657997
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLS-----------LQDVREFTAPY-------GSLPD------FSKVD------FDRDVVFV  142 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~-----------~~~~~~~~~~~-------g~~~~------~~~~~------~~~~v~~~  142 (391)
                      .++...++|=++...-..--+           ...+.....|+       +....      .++++      ....++.+
T Consensus       145 ~Iis~~~syHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAv  224 (461)
T PRK07482        145 KIISRWRGYHGSGIVTGSLTGLSLFHQHFDLPIDRVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAF  224 (461)
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             59996178556753130024663334666799878322468854567886633777789999999999985098848999


Q ss_pred             EEECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHC---CC--CCCCCEEEEECCHHCCCCC-CCCEEEEEC
Q ss_conf             4202420---22032------03502568614886401101102---54--5568579997001200176-651544567
Q gi|254780153|r  143 WNGTTSG---VCVPD------VGFIPESREGLVICDATSAVFAR---HI--DFNKLDVVTFSAQKVLGGE-AGFGIIILS  207 (391)
Q Consensus       143 h~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~---p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s  207 (391)
                      -.|+..|   +..|.      ...+|+++++++|+|=|.+=.++   .+  +..++.=.+...-|+|++= .=++.++++
T Consensus       225 I~EPi~g~gG~~~p~~~yl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~av~~~  304 (461)
T PRK07482        225 IGEPVLGTGGIVPPPAGYWEAIQAVLKKYDILLIADEVVTGFGRLGSMFGSQHYGIEPDLITIAKGLTSAYAPLSGSIVG  304 (461)
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCEEEEEEC
T ss_conf             80563576885518878979999996245963771544324750358411116899997776324445776762799856


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r  208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI  287 (391)
Q Consensus       208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i  287 (391)
                      ++..+.........   .            ....++|+.--|+ ...+...+|+.+++++ +   .++.+++.+.+.+.+
T Consensus       305 ~~i~~~~~~~~~~~---~------------~~~h~~T~~GnPl-acAaa~a~L~~l~~~~-l---~~~~~~~G~~l~~~L  364 (461)
T PRK07482        305 EKVWDVLEQGSDEH---G------------AMGHGWTYSGHPI-CAAAALANLDILEREN-L---VGNAGEVGAYFRAQL  364 (461)
T ss_pred             HHHHHHHHCCCCCC---C------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHH
T ss_conf             88998763265446---6------------6401568999989-9999999999983062-9---999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             74797167668820036531789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r  288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED  367 (391)
Q Consensus       288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d  367 (391)
                      ....--.+.+.+-.-+..+...-.+++...... .+........+...+.++|++....++   ++.+|+.--=.|+.++
T Consensus       365 ~~~~~~~p~v~~VRG~GL~~gvelv~~~~~~~~-~~~~~~~~~~i~~~~~~~Gll~~~~~~---g~vl~~~PPL~Is~~e  440 (461)
T PRK07482        365 RAAFGGHPLVGEVRGVGMLAAVEFVADRDDRTF-FDPALKIGPQVSAAALERGVIARAMPH---GDILGFAPPLVLTRAE  440 (461)
T ss_pred             HHHHHCCCCEEEEEECCEEEEEEEEECCCCCCC-CCHHHHHHHHHHHHHHHCCCEEEECCC---CCEEEEECCEECCHHH
T ss_conf             999854998788880675899999505654666-674579999999999978988960599---9989997994088999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999877
Q gi|254780153|r  368 LLLLCDWLRWVFYFQKISFL  387 (391)
Q Consensus       368 v~~L~~aLe~~~~~~k~~~~  387 (391)
                      ++.+++.|+.++.+.-.+++
T Consensus       441 id~~~~~l~~al~~v~~~~~  460 (461)
T PRK07482        441 ADEIVAIAAKAVDEVAGRLL  460 (461)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999852


No 88 
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.28  E-value=4.8e-08  Score=70.52  Aligned_cols=329  Identities=16%  Similarity=0.133  Sum_probs=174.9

Q ss_pred             CCCCCCCCCCCCC-CHHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             9988868887768-968999986321036-532898--899999999999999968899857999748734899987532
Q gi|254780153|r   11 PKRPFFSSGPCAK-RPGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        11 p~~~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n   86 (391)
                      |+-.+|+-|=-.. +|..+++++...+-+ ..|=++  =..++-+.+.+.+++.++.+=+-+=++++.|++.++..++..
T Consensus        32 ~dvI~l~~G~pd~~~p~~i~~a~~~~l~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~v~~d~I~vt~G~~~al~~~~~~  111 (390)
T PRK08361         32 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES  111 (390)
T ss_pred             CCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHH
T ss_conf             99389989989998789999999999846888889988879999999999999878898823299877899999999999


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE--
Q ss_conf             0578970799707368888876532387630674--057776578676785-----5657997420242022032035--
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF--  157 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~--  157 (391)
                      ++++||.+++-.=.|..- ...+...+ ..+..+  ..+.+..++++++..     .+.+.++.-..-||...+..+.  
T Consensus       112 l~~pGD~Vli~~P~Y~~y-~~~~~~~g-~~~~~vpl~~~~~~~~d~~~l~~~~~~~~k~ivl~~P~NPTG~v~s~e~l~~  189 (390)
T PRK08361        112 LLEQGDEVIIPDPAFVCY-VEDAKIAE-AKPIRIPLREENNFQPDPDELLEAITKRTRMIVINYPNNPTGAVLDKETAKA  189 (390)
T ss_pred             HCCCCCEEEECCCCHHHH-HHHHHHCC-CEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             659999899847607779-99999829-9799997158789877999999736546759998899897577866788889


Q ss_pred             ---ECCCCCCEEEEEECCHHH---H-CCCCC---C-CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf             ---025686148864011011---0-25455---6-857999700120017665--154456778887654114457783
Q gi|254780153|r  158 ---IPESREGLVICDATSAVF---A-RHIDF---N-KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLP  224 (391)
Q Consensus       158 ---~~~~~~~llivD~vSs~g---~-~p~d~---~-~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~  224 (391)
                         +|..++.++|.|-+=+-.   . .+...   . +--+++.|.-|.++ .||  +|.++..++.+++.....      
T Consensus       190 l~~la~~~~i~ii~DE~Y~~l~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~v~~~~~i~~~~~~~------  262 (390)
T PRK08361        190 IADIAEDYNIYILSDEPYEHFLYEDAKHYPMIKFAPDNTILANSFSKTFA-MTGWRLGFVIAPTQVIREMIKLH------  262 (390)
T ss_pred             HHHHHHHCCCEECCHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCHHHCC-CCCCCEEEEEECHHHHHHHHHHH------
T ss_conf             99999863955347065687603887542011313552899802524147-87423799983899999999997------


Q ss_pred             CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             12320011232103347864466644889999999986201031899999999779999999874797167668820036
Q gi|254780153|r  225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS  304 (391)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS  304 (391)
                                       ..+...++.+.-++...++..-....-++.+.+.++++.+.+.+.+.+.+++....++    +
T Consensus       263 -----------------~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~~rr~~~~~~l~~~~g~~~~~P~----g  321 (390)
T PRK08361        263 -----------------AYVIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLNKMPHITVFEPK----G  321 (390)
T ss_pred             -----------------HHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC----E
T ss_conf             -----------------6602787689999999998485048999999999999999999999858996866888----6


Q ss_pred             CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             53178982473101137345678889999988-86282872665-5676750-568615888999999999999999999
Q gi|254780153|r  305 NTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      ..-+-+.+++...   +       ...+...+ .+.|+++--|. +...+.+ ||++..  .++++++.-++-|+.++++
T Consensus       322 g~~lw~~l~~~~~---~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~f~--~~~e~l~eal~Rl~~al~~  389 (390)
T PRK08361        322 AFYVFPKIDETDM---S-------SEDFSEWLLEKARVVVIPGTAFGKMGEGYVRISYA--TSKEKLIEAMERMEKALSK  389 (390)
T ss_pred             EEEEEEECCCCCC---C-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
T ss_conf             6699788888898---9-------99999999971999998873228899997999972--9999999999999999971


No 89 
>PRK05965 hypothetical protein; Provisional
Probab=99.28  E-value=1.7e-08  Score=73.39  Aligned_cols=332  Identities=11%  Similarity=0.021  Sum_probs=172.0

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH---HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CCC-CC-C
Q ss_conf             96899998632103653289889---9999999999999968899857999748734899987532------057-89-7
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG---KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LLG-YR-G   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f---~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~~-~~-~   92 (391)
                      +|+ |.+++.+++-...|-+.-|   .+-..+.-++|.+++  |.+..-+|+..|||.+.|+++.=      .-+ ++ .
T Consensus        64 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~~la~~L~~~~--p~~l~~v~f~~SGSEAvE~AlKlar~y~~a~g~~~r~  140 (459)
T PRK05965         64 QES-IVEAAAKQMRKLPYATGYFHFGSEPAIRLAAELAERA--PGSLNHVYFTLGGSDAVDSAVRFITHYWNATGRPSKK  140 (459)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             799-9999999997567735665668669999999999857--8886879984867999999999999999972799875


Q ss_pred             EEEEEECCHHHHHHHHH--------HH-CCC--CCEEEEEC------CCCCCCC------HHHC----C--CCCCEEEEE
Q ss_conf             07997073688888765--------32-387--63067405------7776578------6767----8--556579974
Q gi|254780153|r   93 VDVLAWESFGLGWMSDI--------RQ-LSL--QDVREFTA------PYGSLPD------FSKV----D--FDRDVVFVW  143 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~--------~~-~~~--~~~~~~~~------~~g~~~~------~~~~----~--~~~~v~~~h  143 (391)
                      .++...++|=++...-+        .+ +..  ........      +.+....      .+.+    +  ....++.+-
T Consensus       141 ~ii~~~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~vAAvi  220 (459)
T PRK05965        141 QFIALERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNPVGDDPQAIIAASVAALEAKVAELGADNVAAFF  220 (459)
T ss_pred             EEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             79997178589974310257774322356899998623578865568788977889999999999999861887579999


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf             202420---22032------035025686148864011011025---4--5568579997001200176-6515445677
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP  208 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~  208 (391)
                      .|...|   +..|.      ...+|+++++++|+|=|.+=.++-   +  +.+++.-.+...-|+|++= .=++.+++++
T Consensus       221 ~EPi~g~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgL~gG~~Plsav~~~~  300 (459)
T PRK05965        221 CEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSD  300 (459)
T ss_pred             ECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECH
T ss_conf             54644668853287688799999987569179983054177624474100366618888887343457867516897648


Q ss_pred             HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r  209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ  288 (391)
Q Consensus       209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~  288 (391)
                      +..+.........               .....++|+..-|+.. .+...+|+.++++ +   ..++.+++.+.+.+.++
T Consensus       301 ~i~~~~~~~~~~~---------------~~~~hg~T~~gnpla~-Aaa~a~L~~l~~~-~---l~~~~~~~g~~l~~~L~  360 (459)
T PRK05965        301 HVYQGIADGAGAA---------------APVGHGYTYSAHPVSA-AVGLEVLRLYHEG-G---LLANGQAAAPRFAAGLD  360 (459)
T ss_pred             HHHHHHHCCCCCC---------------CCCCCCCCCCCCHHHH-HHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHH
T ss_conf             9998761156656---------------5445677899898999-9999999999863-4---99999999999999999


Q ss_pred             HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf             47971676688200365317898247310113734567888999998886282872665567675056861588899999
Q gi|254780153|r  289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL  368 (391)
Q Consensus       289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv  368 (391)
                      .+.. .+++.+-..+..+...-.+.|... ....+........+.....++|.++...+    ...+|+.--=.|+.++|
T Consensus       361 ~L~~-~p~i~dVRG~GLm~gielv~d~~~-~~~~~~~~~~~~~i~~~~~~~Glli~~~g----~~vl~l~PPL~It~~ei  434 (459)
T PRK05965        361 ALRA-HPLVGDVRGRGLLGALELVADKAS-KTPFDAALEPADRIFDRAYANGLVFRAFG----DGVLGFAPALCCTEGEF  434 (459)
T ss_pred             HHHC-CCCEEEEEECCEEEEEEEECCCCC-CCCCCHHHHHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHHH
T ss_conf             8764-997686782562799997126544-66775547999999999996992998079----99899978820899999


Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999
Q gi|254780153|r  369 LLLCDWLRWVFYFQKI  384 (391)
Q Consensus       369 ~~L~~aLe~~~~~~k~  384 (391)
                      +.+++.|+.++.++=+
T Consensus       435 d~~~~~l~~al~evl~  450 (459)
T PRK05965        435 DLIFERTRKTLDDVLA  450 (459)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999999985


No 90 
>PRK07036 hypothetical protein; Provisional
Probab=99.28  E-value=4.2e-08  Score=70.87  Aligned_cols=330  Identities=12%  Similarity=0.083  Sum_probs=171.9

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH--HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CCC-CC-C
Q ss_conf             968999986321036532898--89-9999999999999968899857999748734899987532------057-89-7
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV--LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LLG-YR-G   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~--~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~~-~~-~   92 (391)
                      +|+ |.+++..++-...|-++  .| .....+..+.|.++.  |.+..-+++..|||.++|+++.=      ..+ ++ .
T Consensus        69 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGsEA~E~AlKlAr~~~~~~g~~~r~  145 (466)
T PRK07036         69 REE-MADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELA--PGDLNHVFLTTGGSTAVDSALRFVHYYFNCRGRPAKK  145 (466)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             799-9999999997678606764326899999999999748--8775879983773889999999999998750888760


Q ss_pred             EEEEEECCHHHHHHHHHHHCCC-----------CCEEEEECC------CCCCC-C-----HHHCC------CCCCEEEEE
Q ss_conf             0799707368888876532387-----------630674057------77657-8-----67678------556579974
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSL-----------QDVREFTAP------YGSLP-D-----FSKVD------FDRDVVFVW  143 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~~~------~g~~~-~-----~~~~~------~~~~v~~~h  143 (391)
                      .++...++|=++......--+.           ..+..+..|      .+... .     ..+++      ....++.+-
T Consensus       146 ~ii~~~~syHG~T~~a~s~sg~~~~~~~~~~~~~~v~~~~~p~~~~~p~~~~~~~~~~~~~~~~e~~i~~~~~~~iAa~i  225 (466)
T PRK07036        146 HIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILELGADNIAAFI  225 (466)
T ss_pred             EEEECCCCCCCCCHHHHECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             89834897689656562205884456787788875043257765557766523678999999999999861888668998


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---CC---CCCC--EEEEECCHHCCCCC-CCCEEEE
Q ss_conf             202420---22032------035025686148864011011025---45---5685--79997001200176-6515445
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---ID---FNKL--DVVTFSAQKVLGGE-AGFGIII  205 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~d---~~~i--Dv~~a~sQK~l~~p-pGl~~v~  205 (391)
                      .|...|   +..|.      ...+|+++++++|+|=|.+=.++.   +-   ..++  |++..  -|+|++= .=++.++
T Consensus       226 ~EPi~G~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~~~~~gv~PDiv~~--gKgl~gG~~Pl~av~  303 (466)
T PRK07036        226 AEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITV--AKGLTSGYQPLGAVI  303 (466)
T ss_pred             ECCCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEE--CCCCCCCCCCEEEEE
T ss_conf             566216687130888999999999863790799745642888675520435863889877987--133568877648999


Q ss_pred             ECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             67788876541144577831232001123210334786446664488999999998620103189999999977999999
Q gi|254780153|r  206 LSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQ  285 (391)
Q Consensus       206 ~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~  285 (391)
                      .+++..+.......+.   ..+            ..++|+..=|+ ...+..++|+.+++++    ..+|.+++.+.+.+
T Consensus       304 ~~~~i~~~~~~~~~~~---~~~------------~hg~T~~gnpl-a~Aaa~a~L~~l~~e~----l~~~~~~~G~~l~~  363 (466)
T PRK07036        304 ISERLVDVISGPNAKG---GVF------------THGFTYSGHPV-ACAAALKNIEIMEREG----LCEHVREVGPYFEE  363 (466)
T ss_pred             ECHHHHHHHCCCCCCC---CEE------------ECCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHH
T ss_conf             8599998750467888---455------------03678889989-9999999999986266----99999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCEE-EEE-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCC
Q ss_conf             98747971676688200365317-898-2473101137345678889999988862828726655676750568615888
Q gi|254780153|r  286 FIQENDWIENLAVDETTRSNTSI-CMK-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTV  363 (391)
Q Consensus       286 ~i~~~~~~~~~~~~~~~rS~~~v-~~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i  363 (391)
                      .++.+.- .+.+.+  .|..... .+. +.|+..... ...+......+...+.++|+++..     .+..+|+.--=.+
T Consensus       364 ~L~~L~~-~p~v~d--VRG~GLm~gie~v~d~~~~~~-~~~~~~~~~~i~~~~~~~Gll~~~-----~g~~~~l~PPL~i  434 (466)
T PRK07036        364 RLASLRE-LPLVGD--VRGDHLMACVECVADKGSKAL-LPEDIAIGQRIDRHCQERGLLVRP-----LEHLCVLSPPLII  434 (466)
T ss_pred             HHHHHHC-CCCEEE--EEECCEEEEEEEECCCCCCCC-CCCCHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCC
T ss_conf             9997515-997788--863238999997026654445-771179999999999969949996-----6988999899768


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999999877
Q gi|254780153|r  364 EKEDLLLLCDWLRWVFYFQKISFL  387 (391)
Q Consensus       364 ~~~dv~~L~~aLe~~~~~~k~~~~  387 (391)
                      +.++++.+++.|+.++.++-.+..
T Consensus       435 t~~eid~~l~~l~~al~ev~~~~~  458 (466)
T PRK07036        435 TRAQIDEIVAILRAAIEETADELA  458 (466)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999


No 91 
>PRK06056 consensus
Probab=99.28  E-value=3.2e-08  Score=71.68  Aligned_cols=333  Identities=15%  Similarity=0.072  Sum_probs=176.6

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf             8868887768-968999986321036-5328---9889999999999999996889985799974873489998753205
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL   88 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~   88 (391)
                      .+|+-|=-.. +|..+++++.+.+.+ ..|+   +.=..++-+.+.+.+++-++.+=+-+=++++.|++.++..++.-++
T Consensus        37 i~l~~G~Pd~~~p~~~~~a~~~a~~~~~~~~Y~~~~G~~eLR~aia~~~~~~~g~~~~~d~I~iT~G~~~al~~~~~~l~  116 (402)
T PRK06056         37 IGFGAGEPDFPTPDHIVEAAVAACRDPKNHRYTPAAGLPELREAIAAKTLRDSGYEVSPSQVLVTNGGKQAVYEAFATLL  116 (402)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHC
T ss_conf             78889699999889999999999759988857998681999999999999983899880237980681499999999857


Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE-----
Q ss_conf             78970799707368888876532387630674-05777657867678-----55657997420242022032035-----
Q gi|254780153|r   89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF-----  157 (391)
Q Consensus        89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~-----  157 (391)
                      .+||.+++..=.|..- ...+...+...+.+. ..+.+..+++++++     ..+.+.++.=..-||...+..+.     
T Consensus       117 ~pGD~Vlv~~P~y~~y-~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~~~~~tk~iil~~P~NPtG~v~s~e~l~~l~~  195 (402)
T PRK06056        117 DPGDEVILPAPYWTTY-PEAIRLAGGVPVEVVAGADQGYLVTVEQLEAARTERTKVLLFVSPSNPTGAVYSPEQVRAIGR  195 (402)
T ss_pred             CCCCEEEEECCCCCCC-HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf             9999899817987561-999997289707822373337787999999636668739998489798888742788999999


Q ss_pred             ECCCCCCEEEEEECCHH---HHCCC--------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf             02568614886401101---10254--------556857999700120017665--154456778887654114457783
Q gi|254780153|r  158 IPESREGLVICDATSAV---FARHI--------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLP  224 (391)
Q Consensus       158 ~~~~~~~llivD~vSs~---g~~p~--------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~  224 (391)
                      +|..++.++|.|-+=+-   .+.+.        ++..--+++.|.-|.++ -||  +|.++..++.+++....+.     
T Consensus       196 la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~~~-~~G~R~G~~v~~~~~i~~~~~~~~-----  269 (402)
T PRK06056        196 WAAEHGIWVISDEIYEHLVYDGAVFTSIPAAVPELADRCIVVNGVAKTYA-MTGWRVGWMIGPADVIKAATNLQS-----  269 (402)
T ss_pred             HHHHHCCCEECCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCC-CCCCEEEEEEECHHHHHHHHHHHH-----
T ss_conf             99971461551044321135898888888865454146447520113355-765307999708999999999986-----


Q ss_pred             CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             12320011232103347864466644889999999986201031899999999779999999874797167668820036
Q gi|254780153|r  225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS  304 (391)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS  304 (391)
                                       ..+.++++. .-++...+|..-.  ..++.+.+.++++.+.+.+.+...+++....++-.+  
T Consensus       270 -----------------~~~~~~~~~-~q~~a~~al~~~~--~~~~~~~~~~~~rr~~~~~~L~~~~~~~~~~P~G~~--  327 (402)
T PRK06056        270 -----------------HATSNVSNV-SQRAALAAVSGPL--DAVAEMREAFDRRRRTIVRMLNAIPGVSCPTPDGAF--  327 (402)
T ss_pred             -----------------HCCCCCCHH-HHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEE--
T ss_conf             -----------------545774229-9999999985889--999999878999999999999867992735888446--


Q ss_pred             CCEEEEEECCC---CCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             53178982473---101137345678889999988-86282872665567675056861588899999999999999999
Q gi|254780153|r  305 NTSICMKIVDS---DIASLDINSQKSFCKSMLSFL-EKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       305 ~~~v~~~~~d~---~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                        -+-..+.+-   .........    ..++...+ .+.|+++--|..=....-|||+.-  .++++++.-++-|+.+++
T Consensus       328 --y~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~e~gV~v~PG~~Fg~~g~~Risfa--~~~e~l~eal~RL~~~l~  399 (402)
T PRK06056        328 --YAYPDVKALLGREIRGRRPQT----SAELAALILEEAEVAVVPGEAFGTPGYLRLSYA--LGDDDLVEGVRRLQELLS  399 (402)
T ss_pred             --EEEEECHHHCCCCCCCCCCCC----HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf             --997755453363225899899----999999999709899974844489983999970--899999999999999999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780153|r  381 FQK  383 (391)
Q Consensus       381 ~~k  383 (391)
                      +.|
T Consensus       400 e~k  402 (402)
T PRK06056        400 EAK  402 (402)
T ss_pred             HCC
T ss_conf             568


No 92 
>PRK07682 hypothetical protein; Validated
Probab=99.27  E-value=4.6e-08  Score=70.66  Aligned_cols=313  Identities=12%  Similarity=0.077  Sum_probs=168.8

Q ss_pred             HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             689999863210----365328988999999999999999688998--57999748734899987532057897079970
Q gi|254780153|r   25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSLLGYRGVDVLAW   98 (391)
Q Consensus        25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~   98 (391)
                      |..+++++...+    .++++ +.-..++-+.+.+-+++-++..-+  .+|+ ++.|++.++..++..++.+||.+++..
T Consensus        35 p~~i~ea~~~~~~~g~~~Y~~-~~G~~~lreaia~~~~~r~g~~~~p~~~i~-vt~G~~~al~~~~~~l~~pGD~Vlv~~  112 (378)
T PRK07682         35 PWNVREASIRSLEQGYTSYTA-NAGLLELRQEIAKYLKKRFAVSYDPNDEII-VTVGASQALDVAMRAIINPGDEVLIVE  112 (378)
T ss_pred             CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCEEE-ECCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             899999999998569999899-988899999999999998489999777599-907859999999999659999899925


Q ss_pred             CCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEE
Q ss_conf             7368888876532387630674-05777657867678-----5565799742024202203203-----50256861488
Q gi|254780153|r   99 ESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVI  167 (391)
Q Consensus        99 g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~lli  167 (391)
                      =.|..- ...+...+...+.+. ..+.+...++++++     ..+.+.++.=..-||...+..+     .+|..++.++|
T Consensus       113 P~Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~~~~~~k~iil~~P~NPtG~v~s~~el~~l~~la~~~~i~ii  191 (378)
T PRK07682        113 PSFVSY-APLVTLAGGVPVPVATSLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHNLIVL  191 (378)
T ss_pred             CCHHHH-HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
T ss_conf             850527-9999981885699402654586379999997365268389982897988888899999999997644596795


Q ss_pred             EEECCHHHHC--C-CC---CC---CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             6401101102--5-45---56---857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r  168 CDATSAVFAR--H-ID---FN---KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       168 vD~vSs~g~~--p-~d---~~---~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      .|-+=+-...  + ..   ..   .--+++.|.-|.++ .||  +|.++.+++.+++.....               +  
T Consensus       192 sDEiY~~l~~~~~~~~~~~~~~~~~~~i~~~s~SK~f~-l~G~R~G~~~~~~~~~~~~~~~~---------------~--  253 (378)
T PRK07682        192 SDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFA-MTGWRLGMIAAPVYFSEAMLKIH---------------Q--  253 (378)
T ss_pred             CCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHCC-CCCCCEEEEEECHHHHHHHHHHH---------------H--
T ss_conf             22014653069876776552564445420234124207-85730698970899999999999---------------7--


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                           ..+..+| +..-++...+++.-.+  -++.+.+.++++.+.+.+.+...+ +....  |+  +..-+-..+.+..
T Consensus       254 -----~~~~~~~-~~~q~aa~~al~~~~~--~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~--P~--g~~~~~~~~~~~~  320 (378)
T PRK07682        254 -----YSMMCAP-TMAQFAALEALRNGND--DVERMRDSYRKRRNFFVTSLNEIG-LTCHV--PG--GAFYAFPSISSTG  320 (378)
T ss_pred             -----HCCCCCC-HHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CC--EEEEEEEECCCCC
T ss_conf             -----5567798-4899999999975768--799999999999999999999759-82206--88--6789957878889


Q ss_pred             CCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             011373456788899999-8886282872665-5676750-56861588899999999999999999999
Q gi|254780153|r  317 IASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      .   +       ...+.. .+.++|+++--|. +...+.+ +|++..  .+.+.++.-++-|+.++++.|
T Consensus       321 ~---~-------~~~~~~~ll~~~~V~v~PG~~Fg~~g~~~iRl~~a--~~~e~l~eal~Rl~~~l~~~k  378 (378)
T PRK07682        321 L---S-------SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENKK  378 (378)
T ss_pred             C---C-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf             8---9-------99999999996999998862228999897999961--999999999999999998469


No 93 
>PRK08069 consensus
Probab=99.27  E-value=2.6e-08  Score=72.21  Aligned_cols=315  Identities=10%  Similarity=0.037  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             6899998632103----653289889999999999999996889985799974873489998753205789707997073
Q gi|254780153|r   25 PGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES  100 (391)
Q Consensus        25 p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~  100 (391)
                      |..+++++.+.+-    ++++ +.=..++-+.+.+.+++-++.+=+-+=++++.|++.++..++.-++++||.+++-.=.
T Consensus        45 p~~i~~a~~~~~~~~~~~Y~~-~~G~~~lreaia~~~~~~~g~~~~p~~V~it~G~~~al~~~~~~l~~pGD~Vlv~~P~  123 (390)
T PRK08069         45 PEHIIDAAHKAMNEGHTKYTP-SGGLQALKQEIVKKFKRDQGLAYDPSEIIVCTGAKHALYTLFQVLLDEGDEVIIPTPY  123 (390)
T ss_pred             CHHHHHHHHHHHHCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf             899999999998548998989-9672999999999999986899881118987888999999999727998989980686


Q ss_pred             HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEE
Q ss_conf             68888876532387630674-05777657867678-----5565799742024202203203-----5025686148864
Q gi|254780153|r  101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICD  169 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD  169 (391)
                      |..- ...+...++..+.+. ....+..+++++++     ..+.+.++.=..-||...+..+     .+|..++.++|.|
T Consensus       124 Y~~y-~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k~iil~~P~NPTG~v~s~e~l~~i~~la~~~~~~vi~D  202 (390)
T PRK08069        124 WVSY-PEQVKLAGGKPVYVEGLEDNDFKITAEQLEEAITEKTKAVIINSPSNPTGMIYTKEELAALGEVCLEHDILIVSD  202 (390)
T ss_pred             CCCH-HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE
T ss_conf             6427-999998188048714566678767999999854436858998899698681655068999999987563059853


Q ss_pred             ECCH---HHHCC-C-------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             0110---11025-4-------556857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r  170 ATSA---VFARH-I-------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       170 ~vSs---~g~~p-~-------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      -+=+   +.+.+ .       ++.+--+++.|.-|.++. ||  +|.++..++.+++.....            .     
T Consensus       203 EiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~~-~G~RiG~~~~~~~li~~~~~~~------------~-----  264 (390)
T PRK08069        203 EIYEKLIYGGAEHVSIAQLSNELKEQTIIINGVSKSHSM-TGWRIGYAAGNKQIIKAMTNLA------------S-----  264 (390)
T ss_pred             HHHHHHCCCCCCCCCHHHHCCCCCCCCCEECCCHHHCCC-CCCCEEEEECCHHHHHHHHHHH------------H-----
T ss_conf             323654069989889899495434564100353020377-6323588766999999999998------------6-----


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                           ..+ ..|+...-++...++..-  +.-++.+.+.++++.+.+.+.+...+++....++-.    .-+-..+++..
T Consensus       265 -----~~~-~~~~~~~q~aa~~a~~~~--~~~~~~~~~~~~~r~~~~~~~l~~~~g~~~~~P~Gg----~ylw~~~~~~~  332 (390)
T PRK08069        265 -----HST-SNPTSIAQYGAIAAYAGS--QEPVETMRQAFEERLNIIYDKLIQIPGFTCIKPQGA----FYLFPNVKEAA  332 (390)
T ss_pred             -----HCC-CCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE----EEEEEECCHHH
T ss_conf             -----535-777639999999998688--687999999999999999999850668851479803----89978773111


Q ss_pred             CCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             011373456788899999-88862828726655676750568615888999999999999999
Q gi|254780153|r  317 IASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                       ........    ..+.. .+.+.|+++--|..=..+..||++.-  .+++.++.-++-|+.+
T Consensus       333 -~~~~~~~~----~~~~~~ll~~~gV~v~PG~~Fg~~~~~Rl~fa--~~~~~l~eal~RL~~~  388 (390)
T PRK08069        333 -ALSGFETV----DEFVKALLEEEKVALVPGSGFGAPDNVRLSYA--TSLELLEEAIERIHRF  388 (390)
T ss_pred             -CCCCCCCH----HHHHHHHHHHCCEEEECCCCCCCCCCEEEEEE--CCHHHHHHHHHHHHHH
T ss_conf             -22678889----99999999859999981876799983899984--9999999999999998


No 94 
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.27  E-value=1.3e-08  Score=74.23  Aligned_cols=322  Identities=15%  Similarity=0.145  Sum_probs=186.3

Q ss_pred             HHHHHHHHHCCC---------CCCCCHHHHHHH-HHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHHHHHCCCCCCEEE
Q ss_conf             999986321036---------532898899999-999999999968899-857999748734899987532057897079
Q gi|254780153|r   27 WSLGILEGALLG---------RSHRCVLGKERI-NKAIQLTRKVLEVPE-NYRIAIVPASDTGAVEMALWSLLGYRGVDV   95 (391)
Q Consensus        27 ~v~~~~~~~~l~---------~sHRs~~f~~i~-~~~~~~l~~l~~~p~-~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~   95 (391)
                      .|++++...+-+         +++.+.++.+.+ .-+.++.+++|+... .|.+=+-+-||+.|+-|+.+.|++|||.++
T Consensus        46 ~v~~a~gS~ltnkYaEGyPg~Ryy~G~e~iD~iE~la~~ra~~lF~~~~~~wgaNVqp~SGs~AN~av~~all~pGD~im  125 (450)
T PTZ00094         46 AVLECLGSVFTNKYAEGYPGNRYYGGTEVVDKIENLCQKRALAAFNLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIM  125 (450)
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf             99998577423745588998445466425999999999999998389854366105768669999999999707999799


Q ss_pred             EEE----CCHHHHHHHHHHHCCCC----CEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEEC
Q ss_conf             970----73688888765323876----306740-57776578676785-----565799742024202203--203502
Q gi|254780153|r   96 LAW----ESFGLGWMSDIRQLSLQ----DVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIP  159 (391)
Q Consensus        96 ~~~----g~~~~r~~~~~~~~~~~----~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~  159 (391)
                      ...    |+.+........+.+..    +...+. .+.+ ..|.+++..     .+.+.++- .++.--..|  ....++
T Consensus       126 ~l~l~~GGHltHG~~~~~~~v~~sg~~~~~~~Y~vd~~~-~IDyd~~~~~a~~~kPklIi~G-~Say~r~id~k~~reIa  203 (450)
T PTZ00094        126 GLDLPSGGHLTHGFYTAKKKVSATSIFFESLPYQVNEEG-LIDYDKLEKLAKAFRPKLIIAG-ASAYPRDIDYKRFREIC  203 (450)
T ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC-CCCHHHHHHHHHHHCCCEEEEC-CCCCCCCCCHHHHHHHH
T ss_conf             843566886554334677775401345556773246489-7489999999986199879988-82542543879999999


Q ss_pred             CCCCCEEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             5686148864011011-----02545568579997001200176651544567788876541144577831232001123
Q gi|254780153|r  160 ESREGLVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       160 ~~~~~llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      ...++++++|+.--.|     ..|=++...|++.++.+|.|-||-| +++..+++.-+...+.                 
T Consensus       204 d~vGA~l~~D~AHiaGLIAgg~~psP~~~ADvVT~TTHKTLrGPrG-GiIl~~k~~~~e~~~k-----------------  265 (450)
T PTZ00094        204 DSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GMIFFRKKIRPDIESK-----------------  265 (450)
T ss_pred             HHCCCEEEEECHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCCCHHHHHHH-----------------
T ss_conf             9739989963144444320455798434550475222234778984-2898446640899998-----------------


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                      .....+ ..+-..|-.+.|.++..++.+.... ......++..++++.+-+.+...+ +....  ...-+..+ .+.+.+
T Consensus       266 Id~aVF-Pg~qggph~h~IAa~Ava~~Ea~~~-efk~Ya~qVv~NAkaLa~~L~~~G-~~vvs--ggTdnHlv-lvDl~~  339 (450)
T PTZ00094        266 INQAVF-PGLQGGPHFHQIAAIAVQLKEVCSP-EWKEYAKQVVDNAKALAAELEKRG-FDLVT--GGTDNHLI-LWNLRP  339 (450)
T ss_pred             HCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEEE--CCCCCEEE-EEECCC
T ss_conf             545128-8544677787999999999997576-799999999999999999999789-96950--89976279-997777


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC---CCC--CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             310113734567888999998886282872665---567--67505686158----88999999999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS---YRD--APLGLRVWVGV----TVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~r~--~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      -.+       .   -+..-..|.+.|+.+.-+.   -++  .+.|+|||+-.    -..++|+..+.+.|+.+.+..+-
T Consensus       340 ~g~-------~---G~~ae~~Le~~gI~~NkN~iP~D~~~~~~SGiRiGT~a~TtrGm~e~em~~ia~lI~~~i~~~~~  408 (450)
T PTZ00094        340 FGI-------T---GSKVEKLLDAVNISVNKNTIPGDKSALAPSGIRLGTPALTSRGAVEEDFEFVADFLDRAVKLAQD  408 (450)
T ss_pred             CCC-------C---HHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             899-------9---99999999874938747879999999998703316778883899889999999999999999998


No 95 
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.26  E-value=3.9e-08  Score=71.13  Aligned_cols=297  Identities=15%  Similarity=0.072  Sum_probs=175.0

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH
Q ss_conf             96899998632103653289889999999999999996889985799974873489998753205789707997073688
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL  103 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~  103 (391)
                      +|. +++++.... ...||=|+...  .+.++.|.+.++++.+ +|+ ++.|++.++..++..++++|+.+++..-+|+.
T Consensus        53 sp~-v~~a~~~~~-~~~~rYPd~~~--~~Lr~aiA~~~gv~~~-~I~-v~nGs~e~i~~~~~a~~~pGd~Vl~~~Ptf~~  126 (374)
T PRK05166         53 SPA-LARLFPDIA-ELLRLYPDPQG--RALRAEIAASFGVPTD-QII-LGNGSEDLIAVICRAVLRPGDRVVTLYPSFPL  126 (374)
T ss_pred             CHH-HHHHHHHHH-HHCCCCCCCCH--HHHHHHHHHHHCCCHH-HEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCCHHH
T ss_conf             999-999999868-75376979878--9999999999683830-199-85689999999999997399989877887778


Q ss_pred             HHHHHHHHCCCCCEEEEECCCCCCCCHHHC----C-CCCCEEEEEEECCCCEEECCEEE--EC--CCCCCEEEEEECC-H
Q ss_conf             888765323876306740577765786767----8-55657997420242022032035--02--5686148864011-0
Q gi|254780153|r  104 GWMSDIRQLSLQDVREFTAPYGSLPDFSKV----D-FDRDVVFVWNGTTSGVCVPDVGF--IP--ESREGLVICDATS-A  173 (391)
Q Consensus       104 r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~v~~~h~ETstGv~~~~~~~--~~--~~~~~llivD~vS-s  173 (391)
                      .  ....+..+..+..+........+++++    . ..+.+.++.=..-||...+..++  +.  ...+.++|+|-.= .
T Consensus       127 Y--~~~~~~~G~~v~~vpl~~~~~~d~~~l~~ai~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vvvDEaY~e  204 (374)
T PRK05166        127 H--EDYPTLMGARVERVTVTPDLTVDVDALLAAVARKPRMLMFSNPMNPVGSWLTPGALARLLDAVPPETLIVVDEAYAE  204 (374)
T ss_pred             H--HHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHH
T ss_conf             9--99999829815997368667979999998615698789982898998765884779999974588739995047899


Q ss_pred             HHHC---C--CC-CCCC--E-EEEECCHHCCCCCCCCEEE--EECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCC
Q ss_conf             1102---5--45-5685--7-9997001200176651544--5677-888765411445778312320011232103347
Q gi|254780153|r  174 VFAR---H--ID-FNKL--D-VVTFSAQKVLGGEAGFGII--ILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFC  241 (391)
Q Consensus       174 ~g~~---p--~d-~~~i--D-v~~a~sQK~l~~ppGl~~v--~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (391)
                      |...   +  +. ..+-  . +++-+.-|.++ -||+=+-  ++++ +..+...+.                        
T Consensus       205 f~~~~~~~~~~~~~~~~~~n~IvlrSfSK~~g-laGlRvGyai~~~~~i~~~l~~~------------------------  259 (374)
T PRK05166        205 YAAGDDYPSALTLLKNRGLPWVVLRTFSKAYG-LAGLRIGYGLVSDPSLRAFLDRV------------------------  259 (374)
T ss_pred             HHCCCCCCCHHHHHHHCCCCEEEEEECCHHHH-CCCCCEEEEECCCHHHHHHHHHH------------------------
T ss_conf             75278866479886204787799995556551-57775045415929999999983------------------------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCC
Q ss_conf             8644666448899999999862010318999999997799999998747971676688200365317898-247310113
Q gi|254780153|r  242 GETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASL  320 (391)
Q Consensus       242 ~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~  320 (391)
                       +.+++-+.....+...+|+   .++-++...+...+..+.+++.+.+.+ +..+      -|.++..+. +..+     
T Consensus       260 -~~~~~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~~g-~~v~------ps~anFilv~~~~~-----  323 (374)
T PRK05166        260 -RTPFNANGIAQAAALAALD---DEEHLAKGVALALAERERMKKELAEMG-YRVA------PSRANFLFFDARTD-----  323 (374)
T ss_pred             -CCCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCEEEEEECCCC-----
T ss_conf             -4982869999999999856---999999999999999999999999777-9489------98661899868999-----


Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r  321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                              ...+...|.++|+++.-+.......-+||+.+   ++++.++|+++|+.+++
T Consensus       324 --------~~~~~~~L~~~gI~Vr~~~~~gl~~~lRIsvg---t~een~rll~aL~~il~  372 (374)
T PRK05166        324 --------ASALAEALLRQGVIVKPWKQPGFETYIRVSIG---SPEENDHFMAALDEVLA  372 (374)
T ss_pred             --------HHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHH
T ss_conf             --------99999999848919985898999998999818---99999999999999985


No 96 
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.26  E-value=4.9e-09  Score=76.85  Aligned_cols=279  Identities=18%  Similarity=0.165  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEEE
Q ss_conf             889999999999999996889985799974873489998753205789707997073688--888765323876306740
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREFT  121 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~~  121 (391)
                      .+-.+.++   +.|..+-+...   ++. .+||-+|+.+ +++++++|+.+++...-||.  ++++......+..++..+
T Consensus        51 nPt~~~le---~~la~LEg~~~---a~~-f~SGmaAi~~-~l~~l~~Gd~vv~~~~~Yg~t~~~~~~~l~~~Gi~~~~~d  122 (366)
T PRK08247         51 NPTRGLLE---QAIADLEGGDQ---GFA-CSSGMAAIQL-VMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWGVRFVYVN  122 (366)
T ss_pred             CHHHHHHH---HHHHHHHCCCC---EEE-CCCHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEC
T ss_conf             86799999---99999829850---531-1668999999-9997389998999589686488998877507746999848


Q ss_pred             CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCE---E--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf             57776578676785--56579974202420220320---3--502568614886401--101102545568579997001
Q gi|254780153|r  122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDV---G--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ  192 (391)
Q Consensus       122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~---~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ  192 (391)
                        ..   ++++++.  ....-+++.||.+--.+...   .  .+++.+++++|||-+  +-+...|++. ++|+++-|.-
T Consensus       123 --~~---d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~~~Pl~~-GaDivihS~T  196 (366)
T PRK08247        123 --TA---SIKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLTE-GADIVIHSAT  196 (366)
T ss_pred             --CC---CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHC-CCCEEEEECC
T ss_conf             --88---97999975386754999855999853501599999998646704984177344133574102-8978997424


Q ss_pred             HCCCCCCCCE--EEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             2001766515--445677-8887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  193 KVLGGEAGFG--IIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       193 K~l~~ppGl~--~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      |-++|-+.+-  .++.+. +..++...            +   .+     ..|.   ++.-+.-|.+...|      ..+
T Consensus       197 Kyi~GhsDvl~G~vv~~~~~~~~~l~~------------~---~~-----~~G~---~~~p~~a~l~~rGl------~TL  247 (366)
T PRK08247        197 KYLGGHNDVLAGLVVAKGQELCERLAY------------Y---QN-----AAGA---VLSPFDSWLLIRGM------KTL  247 (366)
T ss_pred             CCCCCCCCEEEEEEEECCHHHHHHHHH------------H---HH-----HCCC---CCCHHHHHHHHCCC------CCH
T ss_conf             201588871547997273888889999------------9---97-----3366---77937777886352------509


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCC
Q ss_conf             99999999779999999874797167668820036531789824731011373456788899999888628287266556
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYR  349 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r  349 (391)
                      .-|.+|+.+++..+.+|+++++.... |..|..  ...+.|.+.+..           ....+...|.--..+..+|+.+
T Consensus       248 ~lR~~~~~~nA~~lA~~L~~hp~V~~-V~yPG~--gg~~sf~l~~~~-----------~~~~f~~~l~l~~~a~SlGg~e  313 (366)
T PRK08247        248 ALRMRQHEENAKALAAFLNEQPGVTD-VLYPGK--GGMLSFRLQDEE-----------WVNPFLKSLKLITFAESLGGVE  313 (366)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEE-EECCCC--CCEEEEEECCHH-----------HHHHHHHHCCCCEEECCCCCCC
T ss_conf             99999999999999999861997048-956998--777999978889-----------9999998474366812657677


Q ss_pred             CC------------C----------C-EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             76------------7----------5-056861588899999999999999999999
Q gi|254780153|r  350 DA------------P----------L-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       350 ~~------------~----------~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      +.            +          . -+|++++    .||++.|++-|+.||++.|
T Consensus       314 SLi~~pa~~th~~~~~~~r~~~Gi~~~liRlSvG----LEd~~DLi~Dl~qAL~~i~  366 (366)
T PRK08247        314 SFITYPATQTHMDIPEEIRIANGVCNRLLRFSVG----IENVEDLKADLKQAFKQVK  366 (366)
T ss_pred             CEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHCC
T ss_conf             2445764245422899999975989295999950----0899999999999999539


No 97 
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.26  E-value=4.5e-08  Score=70.71  Aligned_cols=322  Identities=11%  Similarity=-0.003  Sum_probs=165.9

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHH-H-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             9689999863210365328988-9-999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVL-G-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~-f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|+ |.+++.+++-..-|-++- | .+-..+.-+.|.+++-.+-+.+|+| ..|||.++|+++.=.-  ..+..++...+
T Consensus        63 ~p~-v~~Ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f-~~SGsEAvE~AlKlAr~~tgr~~ii~~~~  140 (448)
T PRK08593         63 PPE-VVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTF-GLSGSDANDGIIKFARAYTGRPYIISFTN  140 (448)
T ss_pred             CHH-HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE-CCCHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             899-9999999984076736663146799999999998578676637997-18757899999999975489987999947


Q ss_pred             CHHHHHHHHHHHCC---------C---CCEEEEECCC------CCCCC------HHHC----C---CCCCEEEEEEECCC
Q ss_conf             36888887653238---------7---6306740577------76578------6767----8---55657997420242
Q gi|254780153|r  100 SFGLGWMSDIRQLS---------L---QDVREFTAPY------GSLPD------FSKV----D---FDRDVVFVWNGTTS  148 (391)
Q Consensus       100 ~~~~r~~~~~~~~~---------~---~~~~~~~~~~------g~~~~------~~~~----~---~~~~v~~~h~ETst  148 (391)
                      +|-++...-..--+         +   ..+..+..|.      ++..+      .+.+    +   ....++.+-.|...
T Consensus       141 ~yHG~T~ga~s~sg~~~~~~~~~~p~~p~~~~vp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPvq  220 (448)
T PRK08593        141 AYHGSTYGSLSMSAISLNMRKKYGPLLPGFYHIPFPDKYRGMYEEPQANSVEEYLAPLKEMFEKYVPADEVACIVIETIQ  220 (448)
T ss_pred             CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf             87768734001047875654456899999578079863345457870679999999999999851788976999997887


Q ss_pred             C---EEECC------EEEECCCCCCEEEEEECCH-HHHC--CC--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHH
Q ss_conf             0---22032------0350256861488640110-1102--54--55685--7999700120017665154456778887
Q gi|254780153|r  149 G---VCVPD------VGFIPESREGLVICDATSA-VFAR--HI--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVE  212 (391)
Q Consensus       149 G---v~~~~------~~~~~~~~~~llivD~vSs-~g~~--p~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~  212 (391)
                      |   +..+.      ...+|+.+++++|+|=|.+ +|--  -+  +..++  |++..|  |+|++===++.++.+++..+
T Consensus       221 g~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~Plsav~~~~ei~~  298 (448)
T PRK08593        221 GDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMTFG--KSLAGGMPMSAIVGRKEIME  298 (448)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCEEEEC--CCCCCCCCEEEEEECHHHHH
T ss_conf             8889873887886899999986680698743001777567603554305288867773--00258874079987589885


Q ss_pred             HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             65411445778312320011232103347864466644889999999986201031899999999779999999874797
Q gi|254780153|r  213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW  292 (391)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~  292 (391)
                      ...   .                   ....+|+.- +-....+..++|+.+++++    ..++.+++.+.+++.+++..-
T Consensus       299 ~~~---~-------------------~~h~~T~~G-npla~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~  351 (448)
T PRK08593        299 SLE---A-------------------PAHLFTTGA-NPVSCEAALATIDMIEDES----LLQASAEKGEYVRKRFDQWVS  351 (448)
T ss_pred             HCC---C-------------------CCCCCCCCC-CHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHH
T ss_conf             217---8-------------------865657899-9899999999999997443----999999999999999999986


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf             16766882003653178982473101137345678889999988862828726655676750568615888999999999
Q gi|254780153|r  293 IENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLC  372 (391)
Q Consensus       293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~  372 (391)
                      -.+.+.+-.-+..+...-.+.++.....+.    .....+...+.++|+++..    ..+..+|+.--=.++.++|+.++
T Consensus       352 ~~p~v~dVRG~GL~~giElv~~~~~~~~~~----~~~~~v~~~~~~~Gll~~~----~~gn~ir~~PpL~it~~eid~~~  423 (448)
T PRK08593        352 KYNFVGDVRGKGLSIGIDIVSDKKLKTRDA----EAALKICNYCFEHGVVIIA----VAGNVLRFQPPLVITYEQLDTAL  423 (448)
T ss_pred             CCCCEEEECCCCEEEEEEEEECCCCCCCCH----HHHHHHHHHHHHCCEEEEE----CCCCEEEEECCCCCCHHHHHHHH
T ss_conf             299788730255178999964555578888----9999999999978908986----79998999789008899999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  373 DWLRWVFYFQKI  384 (391)
Q Consensus       373 ~aLe~~~~~~k~  384 (391)
                      +.|+.++.++++
T Consensus       424 ~~l~~al~~l~a  435 (448)
T PRK08593        424 NTIEDALTALEA  435 (448)
T ss_pred             HHHHHHHHHHHC
T ss_conf             999999999874


No 98 
>PRK06148 hypothetical protein; Provisional
Probab=99.25  E-value=2.5e-08  Score=72.35  Aligned_cols=320  Identities=14%  Similarity=0.064  Sum_probs=174.0

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---CCCCCEEEEEECC
Q ss_conf             9689999863210365328988999999999999999688998579997487348999875320---5789707997073
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---LGYRGVDVLAWES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~~~~~~~~~~~g~  100 (391)
                      +|+ |.+++++++--.+|-+--+..-..+.-++|..++  |+.-..+|+..|||.|.|+++.=-   .++.+.+...+++
T Consensus       642 hP~-v~~ai~~Q~~~L~t~t~y~~~~~~~lAerL~~~~--P~~l~~vfF~NSGSEAnE~AiKlAr~~tgr~~iI~~~~aY  718 (1015)
T PRK06148        642 HPR-VVEAAARQAARLNTNTRYLHDAIVAYAERLTATL--PEGLTVASFVNSGSEANSLALRLARAHTGARDAIVLDWAY  718 (1015)
T ss_pred             CHH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC--CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             989-9999999997624266656836999999999847--7776557630773889999999999860899748860355


Q ss_pred             HHHHHHHHHHHCC-------C----CCEEEEECC------CCCCCC------HHHC-------C-CCCCEEEEEEECCCC
Q ss_conf             6888887653238-------7----630674057------776578------6767-------8-556579974202420
Q gi|254780153|r  101 FGLGWMSDIRQLS-------L----QDVREFTAP------YGSLPD------FSKV-------D-FDRDVVFVWNGTTSG  149 (391)
Q Consensus       101 ~~~r~~~~~~~~~-------~----~~~~~~~~~------~g~~~~------~~~~-------~-~~~~v~~~h~ETstG  149 (391)
                      .| +-..-+.--+       +    ..+.....|      ++....      .+.+       . ....++.+-.|+..|
T Consensus       719 HG-~T~gals~s~~~~~~~~g~~~~~~v~~~~~P~~yr~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~Aa~I~EpIqg  797 (1015)
T PRK06148        719 HG-TTQELIDLSPYKFKRKGGKGRPDHVEEAEVPDSYRAPERWPDAEHGRRFAESVAEQIAAMRAQGRAPAFFIAESIPS  797 (1015)
T ss_pred             CC-CCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             68-63667763677455677889998537788997656777898167899999999999999871588158999788337


Q ss_pred             E---EECC------EEEECCCCCCEEEEEECCHHHHCCCC-CC-----CC--EEEEECCHHCCCCCCCCEEEEECHHHHH
Q ss_conf             2---2032------03502568614886401101102545-56-----85--7999700120017665154456778887
Q gi|254780153|r  150 V---CVPD------VGFIPESREGLVICDATSAVFARHID-FN-----KL--DVVTFSAQKVLGGEAGFGIIILSPASVE  212 (391)
Q Consensus       150 v---~~~~------~~~~~~~~~~llivD~vSs~g~~p~d-~~-----~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~  212 (391)
                      .   ..+.      ...+|.++|+++|+|=|++=.++-=. ||     ++  |++  ..-|.||+===+|.++.+++..+
T Consensus       798 ~gG~~~~p~gyl~~v~~~c~~~G~LlI~DEVQtGfGRTG~~~fa~e~~gV~PDIv--t~aKglg~G~PlgAv~~~~ei~~  875 (1015)
T PRK06148        798 VAGQVFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV--TMGKPIGNGHPMSAVVTTREIAD  875 (1015)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEHHCCCCCCEE--EECCCCCCCCCCEEEEECHHHHH
T ss_conf             8884079889999999999983978999545338782366300003129988879--86564447867678898599997


Q ss_pred             HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             65411445778312320011232103347864466644889999999986201031899999999779999999874797
Q gi|254780153|r  213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW  292 (391)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~  292 (391)
                      ...   ..                  ...++|+.--|+ ...+..++|+.|++++    ..++.++..+.+.+.+..+..
T Consensus       876 ~f~---~g------------------~~~~sTfgGnPl-acAaalavLdii~~e~----L~~na~~~G~~l~~~L~~L~~  929 (1015)
T PRK06148        876 SFD---NG------------------MEYFNTFGGNPV-SCAIGLAVLDIIEDED----LRRNALEIGNYLLAGFRSLQQ  929 (1015)
T ss_pred             HHC---CC------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHH
T ss_conf             542---68------------------752688786999-9999999999998737----999999999999999999886


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf             1676688200365317898247310113734567888999998886282872665-567675056861588899999999
Q gi|254780153|r  293 IENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLL  371 (391)
Q Consensus       293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L  371 (391)
                      -.+++.+-.-++.+.-.=.+.|.....-    .......+...+.++|++++..| |   ++.+||---=.++.++++.+
T Consensus       930 ~~p~IgdVRG~GLm~GiElV~d~~tk~P----a~~~~~~v~~~~~e~GvLi~~~G~~---~nVlri~PPL~it~e~~D~~ 1002 (1015)
T PRK06148        930 RFDIIGDVRGLGLFLGIELVTDRKTKAP----ATAIARKVKDGARERGILIGTEGPK---DNVLKMRPPMIFSRADADHL 1002 (1015)
T ss_pred             HCCCEEEEECCCCEEEEEECCCCCCCCC----CHHHHHHHHHHHHHCCEEEECCCCC---CCEEEECCCCCCCHHHHHHH
T ss_conf             0896887612770899996358777896----3999999999999789189327899---88799808964559999999


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999999
Q gi|254780153|r  372 CDWLRWVFYFQ  382 (391)
Q Consensus       372 ~~aLe~~~~~~  382 (391)
                      +++||.+|++.
T Consensus      1003 l~~Ld~vl~a~ 1013 (1015)
T PRK06148       1003 LEVLDDSFAAA 1013 (1015)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999997


No 99 
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=99.25  E-value=5.6e-09  Score=76.46  Aligned_cols=311  Identities=14%  Similarity=0.123  Sum_probs=178.8

Q ss_pred             CHHHHHHHHHHHCCCC---------CCCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf             9689999863210365---------32898-8999999999999999688998579997487348999875320578970
Q gi|254780153|r   24 RPGWSLGILEGALLGR---------SHRCV-LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~---------sHRs~-~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~   93 (391)
                      .|. |++++...+-++         ++.+. ...++-.-+.++.+++|+..-   +=+-+-||+.++.++.+.|++|||.
T Consensus        33 S~~-v~~a~gS~ltnkYaEG~pg~Ryy~G~e~iD~iE~la~~rak~lF~a~~---anVqp~SGs~An~av~~all~PGD~  108 (380)
T pfam00464        33 SRA-VMEALGSVLTNKYAEGYPGKRYYGGCEYVDEVETLAQDRAKELFGLDG---VNVQPLSGSQANLAVYTALLNPGDR  108 (380)
T ss_pred             CHH-HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHHCCCCE
T ss_conf             999-999855731264658799843346763599999999999999839976---3517787699999999998379998


Q ss_pred             EEEEE----CCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECCC
Q ss_conf             79970----73688888765323876306740-57776578676785-----565799742024202203--20350256
Q gi|254780153|r   94 DVLAW----ESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPES  161 (391)
Q Consensus        94 ~~~~~----g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~~  161 (391)
                      ++...    |+.+......+.-.. .+...+. .+.....|.+++..     .+.+.++-. ++.--..|  ....++.+
T Consensus       109 il~l~l~~GGHltHg~~~~~~g~~-~~~~~Y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~-Say~r~~d~~~~reIad~  186 (380)
T pfam00464       109 IMGLDLPHGGHLTHGYPVNFSGKF-FESMPYGVDPDTGLIDYDQLEKNAKLFKPKLIVAGT-SAYSRLIDYARFREIADE  186 (380)
T ss_pred             EEECCCCCCCCCCCCCCCCEECCE-EEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCHHHHHHHHHH
T ss_conf             995367777545679865620114-677874346454866899999999970998899874-004364488999999975


Q ss_pred             CCCEEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             86148864011011-----0254556857999700120017665154456778887654114457783123200112321
Q gi|254780153|r  162 REGLVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       162 ~~~llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      .++++++|++--.|     ..|=+....|++.++.+|-|-||-| +++..++..-+-.+++...                
T Consensus       187 vgA~l~~D~aH~~GLIA~g~~p~Pl~~ADvvt~tTHKTlrGPrG-GiIl~~~~~~e~~~kId~a----------------  249 (380)
T pfam00464       187 VGAYLMVDMAHIAGLVAAGVIPSPFPYAHVVTTTTHKTLRGPRG-GMIFFREILYELEKKINSA----------------  249 (380)
T ss_pred             CCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCCHHHHHHHHCCC----------------
T ss_conf             09889986377777774243799546665785354566789985-1798378379999997140----------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                        .+ ..+-..|-.+.|.++..++.+....+ .....++.-++++.+-+.+...+ +....  -...+..+. +.+.+..
T Consensus       250 --vF-Pg~qggp~~h~iAa~Aval~Ea~~~~-f~~Ya~qVv~NAk~La~~L~~~G-~~vv~--ggTd~H~vl-vdl~~~g  321 (380)
T pfam00464       250 --VF-PGLQGGPLNHVIAAKAVALKQALTPE-FKVYQQQVLKNAKALAEALKERG-YKLVS--GGTDNHLVL-VDLRPKG  321 (380)
T ss_pred             --CC-CCCCCCHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHCC-CEECC--CCCCCCEEE-EECCCCC
T ss_conf             --48-87667700657999999999984852-99999999999999999999788-83577--999876899-9776669


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC----C--CCCCEEEEECCC----CCCHHHHHHHHHHH
Q ss_conf             01137345678889999988862828726655----6--767505686158----88999999999999
Q gi|254780153|r  317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSY----R--DAPLGLRVWVGV----TVEKEDLLLLCDWL  375 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----r--~~~~~~RIg~~g----~i~~~dv~~L~~aL  375 (391)
                      +.          -+.....|.+.|+.+.-+.-    +  ..+.|+|||+--    -..++|+..+.+.|
T Consensus       322 ~~----------G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGt~~~T~rG~~e~em~~ia~~I  380 (380)
T pfam00464       322 LD----------GKRAEKALERANITANKNTIPGDPKSPFVTSGLRLGTPALTSRGFGEADFEEVAGYI  380 (380)
T ss_pred             CC----------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHC
T ss_conf             99----------999999999769287888598999999888842657778983899889999999659


No 100
>PRK06105 aminotransferase; Provisional
Probab=99.25  E-value=3.9e-08  Score=71.08  Aligned_cols=334  Identities=8%  Similarity=0.004  Sum_probs=172.3

Q ss_pred             CHHHHHHHHHHHCC--CCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CC-CCCC-
Q ss_conf             96899998632103--653289889-9999999999999968899857999748734899987532------05-7897-
Q gi|254780153|r   24 RPGWSLGILEGALL--GRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LL-GYRG-   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l--~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~-~~~~-   92 (391)
                      +|+ |.+++.+++=  ...|...-+ .+...+.-+.|.++...+ ..+|+| ..|||.++|+++.=      .. .++. 
T Consensus        66 hp~-i~~Ai~~Q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~-l~~v~f-~~sGSEAvE~AlKlA~~y~~a~g~~~r~  142 (460)
T PRK06105         66 EQR-LVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVP-MSKVFF-TNSGSEANDTVVKLIWYYNNALGRPEKK  142 (460)
T ss_pred             CHH-HHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCC-CCEEEE-ECCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             999-9999999996578601258767889999999999737888-487998-3770889999999999999963898863


Q ss_pred             EEEEEECCHHHHHHHHHHHCCC-----------CCEEEEECCC-------CCCCC------HHHCC------CCCCEEEE
Q ss_conf             0799707368888876532387-----------6306740577-------76578------67678------55657997
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSL-----------QDVREFTAPY-------GSLPD------FSKVD------FDRDVVFV  142 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~~~~-------g~~~~------~~~~~------~~~~v~~~  142 (391)
                      .++...++|=++...-..--+.           ..+.....|+       ++...      .++++      ....++.+
T Consensus       143 ~iis~~~syHG~T~ga~s~tg~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAav  222 (460)
T PRK06105        143 KIISRKRGYHGVTIASASLTGLPNNHRSFDLPIDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAF  222 (460)
T ss_pred             EEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             69972376366504455420895335566899888044678843466888878899999999999999985198856799


Q ss_pred             EEECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEEC
Q ss_conf             4202420---22032------035025686148864011011025---4--5568579997001200176-651544567
Q gi|254780153|r  143 WNGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILS  207 (391)
Q Consensus       143 h~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s  207 (391)
                      -.|...|   +..+.      ...+|+++++++|+|=|.+=.++-   +  +..++.-.+....|+|++= .-++.++.+
T Consensus       223 IvEPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKglggG~~Pl~av~~~  302 (460)
T PRK06105        223 IGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVLSKQLTSSYQPLSAVLIN  302 (460)
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCEEEEEEC
T ss_conf             83672488887269868989999999856977993354117873337612205873787456611235787750488423


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r  208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI  287 (391)
Q Consensus       208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i  287 (391)
                      ++..+.....   ......            ...++|+..-|+. ..+..++|+.+++++    ..++.+++.+.+.+.+
T Consensus       303 ~~i~~~~~~~---~~~~~~------------~~hg~T~~gnpla-~Aaala~L~~i~~~~----l~~~~~~~g~~l~~~L  362 (460)
T PRK06105        303 ERVYDPIADE---SGKIGT------------FGHGFTASGHPVA-AAVALENLAIIEERD----LVGNAAELGARFQDRL  362 (460)
T ss_pred             HHHHHHHCCC---CCCCCC------------CCCCCCCCCCHHH-HHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf             8898765036---666666------------5325689999899-999999999998648----9999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             74797167668820036531789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r  288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED  367 (391)
Q Consensus       288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d  367 (391)
                      +...- .+++.+-.-+..+...-.+.++..... .+........+...+.++|+++..     .|+.+|+.--=.++.++
T Consensus       363 ~~l~~-~p~i~~VRG~Gl~~gielv~~~~~~~~-~~~~~~~~~~v~~~~~~~Gll~~~-----~gn~i~i~PPL~it~~e  435 (460)
T PRK06105        363 RALAD-HPLVGEVRGVGLIAAVELVADKATKTP-FDPPGAVGARANARAHEHGVISRA-----MGDTLAFCPPLIITAAQ  435 (460)
T ss_pred             HHHHC-CCCEEEEECCCEEEEEEEECCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHH
T ss_conf             98626-997688851673999998516544556-772079999999999978968930-----69989997992488999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999877
Q gi|254780153|r  368 LLLLCDWLRWVFYFQKISFL  387 (391)
Q Consensus       368 v~~L~~aLe~~~~~~k~~~~  387 (391)
                      ++.+++.|+.++.+.-+.+.
T Consensus       436 id~~~~~l~~aL~e~~a~~~  455 (460)
T PRK06105        436 VDEMVDRFGRALDDTAAWLA  455 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999


No 101
>PRK06460 hypothetical protein; Provisional
Probab=99.25  E-value=8.3e-09  Score=75.37  Aligned_cols=282  Identities=17%  Similarity=0.140  Sum_probs=162.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++.   |..+-+...   + ++.+||-+|+.+++++++++|+.+++...-||.  ++++......+.++...
T Consensus        43 gnPT~~~le~~---la~LEg~~~---a-~~~~SGmaAi~~~l~~~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gv~v~~~  115 (375)
T PRK06460         43 VNPTVLKLAEK---IAELEEAEM---G-VAFSSGMGAISTTLLTLLKPGSSVLIHRDMFGRSYRFFTDFLRNWGVKVEVA  115 (375)
T ss_pred             CCHHHHHHHHH---HHHHHCCCE---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf             88779999999---999819980---8-9953599999999999728999899717875867999999987378677973


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--5657997420242022032---0--3502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +.  .   +.+.++.  .....+++.||.+--....   .  ..+++++++++|||-+  +-+...|++. ++|+++-|.
T Consensus       116 d~--~---~~~~~~~~~~~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~gi~~vVDNT~atP~~~~Pl~~-GaDivvhS~  189 (375)
T PRK06460        116 RP--G---EENILEKIKNKRYDVVFVETISNPLLRVIDIPELSKACKENGALLIVDSTFATPINQKPLVQ-GADIVIHSA  189 (375)
T ss_pred             CC--C---CHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf             89--9---99999973476760899988999876405858999999874993897567414122881451-798899955


Q ss_pred             HHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             120017665--154456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-++|-..  .|+++.+++.++++....                    ...|.   +++-+..|.+   ++   .-..+
T Consensus       190 TKyi~GhsD~l~Gvv~~~~~~~~~l~~~~--------------------~~~G~---~lsP~~a~l~---~r---Gl~TL  240 (375)
T PRK06460        190 SKFIAGHNDVIAGLAAGSYELMKKIDLMR--------------------RTLGT---SLDPHAAYLT---IR---GIKTL  240 (375)
T ss_pred             CCCCCCCCCEEEEEECCCHHHHHHHHHHH--------------------HHCCC---CCCHHHHHHH---HC---CCCCH
T ss_conf             64346788734034248199999999998--------------------64278---7881668888---63---69989


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676688200--------------365317898247310113734567888999998
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      .-|.+|+.+++..+-+|+++++..... ..|..              -....+.|.+...      .+...    .+...
T Consensus       241 ~lR~~~~~~nA~~lA~~L~~hp~V~~V-~yPgl~s~p~h~lakk~~~g~ggl~sf~l~~~------~~~~~----~f~~~  309 (375)
T PRK06460        241 KIRMDVINSNAQKIAEFLQEHPKVSKV-YYPGLKSHPDYGIARRVLKGYGGVVSFEIKGS------QNDAL----KLMKR  309 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCCEEEEEECCC------HHHHH----HHHHH
T ss_conf             999999999999999999748981779-89899999479999985699974269997089------99999----99982


Q ss_pred             HHHCCEEECCCCCCC------------C----------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             886282872665567------------6----------75-0568615888999999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRD------------A----------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       336 l~~~g~~~~~~~~r~------------~----------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      |.--..++.+|+.++            .          .. -+|+++|=    ||.+.|++-|+.|+.+
T Consensus       310 L~lf~~a~SlGg~eSLi~~p~~~sh~~~~~e~~~~~Gi~~~liRlSvGl----Ed~eDLi~DL~~AL~~  374 (375)
T PRK06460        310 LSVILPAQTLGGVNSTISHPATMSHRTLTPEERKILGITDSMLRLSVGI----EDVEDLIEDLDRALSN  374 (375)
T ss_pred             CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf             8826343167876301127542455318999999659793969999421----9999999999999833


No 102
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.24  E-value=1.9e-08  Score=73.07  Aligned_cols=281  Identities=18%  Similarity=0.147  Sum_probs=160.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+-+.    +-.+..+||-.|+.+++++++++|+.++....-||.-  +........+.++...
T Consensus        51 gNPT~~~lE~~l---a~LEg~----~~a~~~sSGmaAi~~~l~~ll~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~v~~~  123 (370)
T PRK07582         51 SNPTWRQLESAL---GELEGG----AAALVFGSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREA  123 (370)
T ss_pred             CCHHHHHHHHHH---HHHCCC----CEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf             986899999999---997199----7189864879999999999708999899778877799999998875068168953


Q ss_pred             ECCCCCCCCHHHCCCCCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCHH
Q ss_conf             057776578676785565799742024202203---203--502568614886401--1011025455685799970012
Q gi|254780153|r  121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQK  193 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQK  193 (391)
                        +....  .+...  ...-+++.||.+--...   +.+  .+++++++++|||-+  |-+...|+++ ++|+++-|.-|
T Consensus       124 --~~~d~--~~~~~--~~tklv~~EspsNP~l~v~Di~~ia~~A~~~gi~~vVDNT~atP~~~~Pl~~-GADivvhS~TK  196 (370)
T PRK07582        124 --PTAGM--AEAAA--GAADLVLAETPSNPGLDVVDLARLARACHAAGALLVVDNTTATPLGQRPLEL-GADLVVASDTK  196 (370)
T ss_pred             --CCHHH--HHHHC--CCCCEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCHHHCCCHHC-CCCEEEEEECE
T ss_conf             --85517--87722--5773899977999886533538889999876996999889840642480021-89869885043


Q ss_pred             CCCCCCCC--EEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             00176651--5445677-88876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r  194 VLGGEAGF--GIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS  270 (391)
Q Consensus       194 ~l~~ppGl--~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~  270 (391)
                      -++|-..+  |.|+.++ +..++...            +.        ...|   .+++-+..|.+...|      ..+.
T Consensus       197 Yl~Ghsd~lgG~v~~~~~~~~~~~~~------------~~--------~~~G---~~~sP~~a~lllrGl------~TL~  247 (370)
T PRK07582        197 ALSGHSDLLAGYVAGRDPELMAAVER------------WR--------LLAG---AIPGPFEAWLAHRSL------ATLG  247 (370)
T ss_pred             EECCCCCCCCEEEECCCHHHHHHHHH------------HH--------HHCC---CCCCHHHHHHHHHHC------CCHH
T ss_conf             52478874032872588889999999------------99--------8528---878878899998610------8688


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             99999997799999998747971676688200--------------3653178982473101137345678889999988
Q gi|254780153|r  271 ACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      -|.+||.+++..+-+|+++++..... ..|.-              ..-.++.|.+.+.       +.    ...+...|
T Consensus       248 lRm~r~~~nA~~lA~~L~~hp~V~~V-~yPgL~s~p~h~la~k~~~g~Gg~~sf~l~~~-------~~----~~~f~~~l  315 (370)
T PRK07582        248 LRFERQCQNALAVAELLREHPAVRGL-RYPGLPEDPAHAVARAQMRRFGGLVSFELADA-------EA----VEAFVDRS  315 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCCEEEEEECCH-------HH----HHHHHHHC
T ss_conf             99999987899999999709996778-89899998139999986899873899997999-------99----99999817


Q ss_pred             HHCCEEECCCCCCC-----------CCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             86282872665567-----------6750-5686158889999999999999999999
Q gi|254780153|r  337 EKEEIAYDIGSYRD-----------APLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       337 ~~~g~~~~~~~~r~-----------~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      .--..+..+|+..+           .+.+ +|++++    .||++.|++-|+.||++.
T Consensus       316 ~l~~~a~SlGg~~s~~~~~~~~~~~i~~~liRlSVG----lEd~~DLi~Dl~qAL~~l  369 (370)
T PRK07582        316 RLLVAATSFGGVHTSADRRARWGDAVPPGFVRLSCG----IEDTDDLVADVEQALDAL  369 (370)
T ss_pred             CCCEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEEE----CCCHHHHHHHHHHHHHHC
T ss_conf             947245363346678479988039979392999940----099999999999999856


No 103
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.24  E-value=8.8e-09  Score=75.20  Aligned_cols=278  Identities=16%  Similarity=0.113  Sum_probs=172.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHC---CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---C
Q ss_conf             688877689689999863210---3653289889999999999999996889985799974873489998753205---7
Q gi|254780153|r   16 FSSGPCAKRPGWSLGILEGAL---LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---G   89 (391)
Q Consensus        16 F~pGP~~~~p~~v~~~~~~~~---l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---~   89 (391)
                      ++.+|+.+ |.+..+.+...+   ++-.+.+|-...+=+++...+.++++.|+...-.| +.|||.+.-.+++-.-   .
T Consensus        67 ~~~~~~~~-~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~-t~GgTean~lal~aar~~~~  144 (460)
T COG0076          67 AGFCPTRV-PPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTF-TSGGTEANLLALLAARERWR  144 (460)
T ss_pred             ECCCCCCC-HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE-ECCHHHHHHHHHHHHHHHHH
T ss_conf             63578886-79999999998734799812383158889999999999957997660679-61707999999999999987


Q ss_pred             C--C--------C-EEE-EEECCHHHHHHHHHHHCCCCCEEEEECCC-CCCCCHHHCC----CCCC---EEEEEEECCCC
Q ss_conf             8--9--------7-079-97073688888765323876306740577-7657867678----5565---79974202420
Q gi|254780153|r   90 Y--R--------G-VDV-LAWESFGLGWMSDIRQLSLQDVREFTAPY-GSLPDFSKVD----FDRD---VVFVWNGTTSG  149 (391)
Q Consensus        90 ~--~--------~-~~~-~~~g~~~~r~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~----~~~~---v~~~h~ETstG  149 (391)
                      +  +        . .++ .....|+-.   .++++-+.......... ....+.++++    ....   +.-+-..|-+|
T Consensus       145 ~~~~~~~~~~~~~P~ii~s~~aH~s~~---Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G  221 (460)
T COG0076         145 KRALAESGKPGGKPNIVCSETAHFSFE---KAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTG  221 (460)
T ss_pred             HHHHHCCCCCCCCCEEEECCCCCEEHH---HHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             664420234468874994574312099---99998188523787524750568999999998746476499972688887


Q ss_pred             EEECCEEE--ECCCCCCEEEEEECCHHHHCCCC---------CCCCEEEEECCHHCCCCCCCCEEEEECHH-HHHHHHHC
Q ss_conf             22032035--02568614886401101102545---------56857999700120017665154456778-88765411
Q gi|254780153|r  150 VCVPDVGF--IPESREGLVICDATSAVFARHID---------FNKLDVVTFSAQKVLGGEAGFGIIILSPA-SVERLEKY  217 (391)
Q Consensus       150 v~~~~~~~--~~~~~~~llivD~vSs~g~~p~d---------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~-al~~~~~~  217 (391)
                      ..=|+.++  ++.+++..+-||+.+.-...|+.         ...+|-+..+.+|.+..|+|.|.++++++ .+.+....
T Consensus       222 ~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~  301 (460)
T COG0076         222 SIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIF  301 (460)
T ss_pred             CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHC
T ss_conf             77889999999997699789873440021102474225351788820899886427788887069999688984677612


Q ss_pred             CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             44577831232001123210334786446664488999999998620103189999999977999999987479716766
Q gi|254780153|r  218 VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLA  297 (391)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~  297 (391)
                      .. .+.+.+           .........|.+...+.++-..++.+-.+ |..++..++.+.++.+.+.+++.+.++...
T Consensus       302 ~~-~yl~~~-----------~~~~~ti~~sr~~~~~~~~~~~l~~lG~e-Gy~~l~~~~~~~a~~la~~l~~~~~~e~~~  368 (460)
T COG0076         302 AD-YYLPGG-----------GIPNFTILGSRPGRQALALYANLRRLGRE-GYRKLLDRTLELARYLAEELEKLGDFELVN  368 (460)
T ss_pred             CC-CCCCCC-----------CCCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf             36-677877-----------86663688505418999999999996788-899999999999999999986478827633


Q ss_pred             CCCCCCCCCEEEEEECCC
Q ss_conf             882003653178982473
Q gi|254780153|r  298 VDETTRSNTSICMKIVDS  315 (391)
Q Consensus       298 ~~~~~rS~~~v~~~~~d~  315 (391)
                       ++   -..+++|+.++.
T Consensus       369 -~p---~l~~V~fr~~~~  382 (460)
T COG0076         369 -EP---ELPIVAFRLKDD  382 (460)
T ss_pred             -CC---CCEEEEEECCCC
T ss_conf             -88---650799965764


No 104
>PRK03321 putative aminotransferase; Provisional
Probab=99.24  E-value=5.6e-08  Score=70.12  Aligned_cols=302  Identities=16%  Similarity=0.106  Sum_probs=175.4

Q ss_pred             CCCCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             88868887768-96899998632103653289889999999999999996889985799974873489998753205789
Q gi|254780153|r   13 RPFFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR   91 (391)
Q Consensus        13 ~~~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~   91 (391)
                      -..|+.+=.+. +|..|++++...+-+ .+|=|+  .-..+.++.|.+.++++.+ .|++ +.|++.++..++..++++|
T Consensus        24 ~i~ls~Nenp~gp~p~v~~ai~~~~~~-~~~YPd--~~~~~Lr~aiA~~~~v~~~-~I~v-~nGs~e~i~~~~~~~~~~g   98 (352)
T PRK03321         24 AIKLSSNETPFGPLPSVRAAIAEATDG-LNRYPD--NGAVELRAALAEHLGVAPE-HVAV-GCGSVALCQQLVQATAGPG   98 (352)
T ss_pred             CEECCCCCCCCCCCHHHHHHHHHHHHH-CCCCCC--CCHHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCC
T ss_conf             378029699999889999999986530-677989--9869999999998787858-7998-7469999999999981797


Q ss_pred             CEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE---ECC-CC
Q ss_conf             707997073688888765323876306740577765786767-----855657997420242022032035---025-68
Q gi|254780153|r   92 GVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF---IPE-SR  162 (391)
Q Consensus        92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~  162 (391)
                      +.+++.+=+|+..  ..+.+..+..+..+........+++.+     +..+.+.++.=..-||...+..+.   +.. ..
T Consensus        99 d~Vl~p~P~f~~Y--~~~~~~~G~~~~~v~l~~~~~~dl~~l~~~i~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~  176 (352)
T PRK03321         99 DEVVFAWRSFEAY--PILVQVAGATPVQVPLTDDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAALARFVAAVPA  176 (352)
T ss_pred             CEEEECCCCHHHH--HHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf             9899888853268--99999809879998667555788378998658887589984999973013683758999975547


Q ss_pred             CCEEEEEECCH-HHHCC-----CC-CCCC-E-EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             61488640110-11025-----45-5685-7-999700120017665--1544567788876541144577831232001
Q gi|254780153|r  163 EGLVICDATSA-VFARH-----ID-FNKL-D-VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       163 ~~llivD~vSs-~g~~p-----~d-~~~i-D-v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      +.++|+|-.=. |...+     +. ..+. . +++-+.-|.+|. ||  +|+++.+++.++++.+...            
T Consensus       177 ~~~vvvDEaY~~f~~~~~~~~~~~~~~~~~nlivlrSfSK~~gl-aGlRlGy~ia~~~~i~~l~~~~~------------  243 (352)
T PRK03321        177 DVLVVLDEAYVEYIRDGDVPDGLELVRDHPNVVVLRTFSKAYGL-AGLRVGYAVGHPEVITALRKVAV------------  243 (352)
T ss_pred             CCEEEEHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCC-CCCCCEEEECCHHHHHHHHHHCC------------
T ss_conf             84797224089884277876278875204525540254413378-98853320289999999998458------------


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             12321033478644666448899999999862010318999999997799999998747971676688200365317898
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK  311 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~  311 (391)
                                   ++..+....++...+|+   .+.-+....++..+..+.+++.+.+.+ +..+      -|.++-.+.
T Consensus       244 -------------p~~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~~g-~~v~------ps~anFi~~  300 (352)
T PRK03321        244 -------------PFSVNSLAQAAAIASLE---AADELLERVDAVVAERDRVSAALRAAG-WTVP------PSQANFVWL  300 (352)
T ss_pred             -------------CCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCEEEEE
T ss_conf             -------------98855999999999964---929999999999999999999999785-8588------998749999


Q ss_pred             -ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             -247310113734567888999998886282872665567675056861588899999999999999
Q gi|254780153|r  312 -IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       312 -~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                       +.++             ...+...|.++|+++.-  +.  +.++||+.+   ++++.++|++||+.
T Consensus       301 ~~~~~-------------~~~~~~~L~~~GIlVR~--~~--~~~~RIsvg---t~een~~ll~Alk~  347 (352)
T PRK03321        301 PLGER-------------TADFAAAAAEAGVVVRP--FG--GEGVRVTVG---APEENDAFLRAARA  347 (352)
T ss_pred             ECCCC-------------HHHHHHHHHHCCEEEEE--CC--CCEEEEEEC---CHHHHHHHHHHHHH
T ss_conf             51899-------------99999999819939986--69--991899809---99999999999999


No 105
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.24  E-value=4.4e-08  Score=70.74  Aligned_cols=322  Identities=12%  Similarity=0.059  Sum_probs=173.2

Q ss_pred             CCCCCCCCC-CCHHHHHHHHHHHCCC-CCCCCHH---HHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHH
Q ss_conf             886888776-8968999986321036-5328988---999999999999999688998--57999748734899987532
Q gi|254780153|r   14 PFFSSGPCA-KRPGWSLGILEGALLG-RSHRCVL---GKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        14 ~~F~pGP~~-~~p~~v~~~~~~~~l~-~sHRs~~---f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~n   86 (391)
                      .+|+-|=-. -+|..+++++...+-. ..|.=.+   ..++-+.+-+.+++-++..-+  .+| +.+.|++.++..+++-
T Consensus        38 i~L~iG~Pd~~~P~~v~~a~~~al~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~v-~vt~Ga~~al~~~~~a  116 (394)
T PRK05942         38 IDLGMGNPDGAAPQPVIEAAIAALEDPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEA-LPLLGSKEGLTHLALA  116 (394)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHH
T ss_conf             888598999988899999999998388888989976859999999999999868988988759-9888889999999999


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEE--EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf             057897079970736888887653238763067--4057776578676785-----565799742024202203203---
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVRE--FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG---  156 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~---  156 (391)
                      ++++||.+++-.=.|..-. ..+...+ ..+..  .....+...++++++.     .+.+.++.=..-||...+...   
T Consensus       117 l~~pGD~Vlv~~P~Yp~y~-~~~~~~g-~~~~~v~l~~~~~~~~d~~~l~~~i~~~tk~iil~~P~NPTG~v~~~e~l~~  194 (394)
T PRK05942        117 YVNPGDVVLVPSPAYPAHF-RGPLIAG-AQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEE  194 (394)
T ss_pred             HCCCCCEEEECCCCCHHHH-HHHHHCC-CEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHCCHHHHHH
T ss_conf             5799898997888867689-9999859-9899997058768877999999861126708999389881012201999999


Q ss_pred             --EECCCCCCEEEEEECCHH---HH-CCCC------CCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCC
Q ss_conf             --502568614886401101---10-2545------568579997001200176651--544567788876541144577
Q gi|254780153|r  157 --FIPESREGLVICDATSAV---FA-RHID------FNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       157 --~~~~~~~~llivD~vSs~---g~-~p~d------~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~  222 (391)
                        .+|..++.++|.|-+=+-   .+ .|..      ....-+.+.|.-|.++ .||+  |.++.+++.+++.......  
T Consensus       195 i~~~a~~~~i~vIsDEiY~~l~~dg~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~ii~~~~~i~~l~~~~~~--  271 (394)
T PRK05942        195 IVAFARKYEILLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYN-MAGWRVGFVVGNRDIIQGLRTLKTN--  271 (394)
T ss_pred             HHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHCCCCCCCCEEECCCCCCCC-CCCCCEEEEECCHHHHHHHHHHHHH--
T ss_conf             9998851786797037410025568766557655465344216603334567-8774259986799999999999985--


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                                          ....+ +...-++...+|++-.  .-++.+.++++++.+.+.+.+...+ +....  +. 
T Consensus       272 --------------------~~~~~-~~~~q~aa~~al~~~~--~~~~~~~~~~~~rrd~l~~~L~~~g-~~~~~--p~-  324 (394)
T PRK05942        272 --------------------LDYGI-FSALQKAAETALQLPD--SYLQQVQERYRQRRDFLIQGLGELG-WDIPP--TK-  324 (394)
T ss_pred             --------------------CCCCC-CHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CC-
T ss_conf             --------------------34576-7699999999985847--7899999999999999999898769-67537--88-


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             365317898247310113734567888999998886282872665-5676750-56861588899999999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                       +..-+-+.++. .   .+   ...+   ...++.+.|+++--|. +...+.+ ||++.-  .+.+.++.-++-|+.|+.
T Consensus       325 -g~~y~w~~~~~-~---~~---~~~f---~~~ll~~~gV~v~PG~~Fg~~g~~~iRlsf~--~~~~~l~ea~~Rl~~a~~  391 (394)
T PRK05942        325 -ATMYLWVPCPV-G---MG---STDF---ALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALHRIKQAGI  391 (394)
T ss_pred             -EEEEEEEECCC-C---CC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf             -58899886899-9---79---8999---9999984999998873117899987999971--889999999999999998


Q ss_pred             H
Q ss_conf             9
Q gi|254780153|r  381 F  381 (391)
Q Consensus       381 ~  381 (391)
                      +
T Consensus       392 r  392 (394)
T PRK05942        392 R  392 (394)
T ss_pred             H
T ss_conf             5


No 106
>PRK06375 consensus
Probab=99.24  E-value=3.9e-08  Score=71.12  Aligned_cols=311  Identities=10%  Similarity=0.038  Sum_probs=172.9

Q ss_pred             HHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf             68999986321036-532898--899999999999999968899857999748734899987532057897079970736
Q gi|254780153|r   25 PGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF  101 (391)
Q Consensus        25 p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~  101 (391)
                      |..|++++.+.+.. ..|=++  =..++-+.+.+.+++-++..-+-+-+++++ |+.++..++..++.+||.+++-+=.|
T Consensus        44 P~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~i~vt~-~~~~l~~~~~~l~~pGD~Vii~~P~Y  122 (381)
T PRK06375         44 PDNIIKYAFEMAKSGKTHYTPSAGIPELREKIALKLKSRNNIDAVAKNVLVTP-TKFGINLAMMVILNPGDEVLIPSPYY  122 (381)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC-HHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             89999999999737998889999869999999999998559999957699854-89999999998669999899818887


Q ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEEC
Q ss_conf             888887653238763067405777657867678-----55657997420242022032035-----02568614886401
Q gi|254780153|r  102 GLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDAT  171 (391)
Q Consensus       102 ~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~v  171 (391)
                      ..- ...+...+ .....+....+..+++++++     ..+.+.++.=..-||...+..+.     +|..++..+|.|-+
T Consensus       123 ~~y-~~~~~~~g-~~~v~~~~~~~~~~d~~~l~~~i~~~tk~i~l~nP~NPTG~v~s~e~l~~i~~la~~~~i~iIsDEi  200 (381)
T PRK06375        123 VSY-PDIVKLAG-GKPVFVDTDDDYNIDIDNMRKAVTPKTRAIIINNPVNPTGKVLSEKEIRELVDFALENNLYIVSDEI  200 (381)
T ss_pred             HHH-HHHHHHHC-CEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCC
T ss_conf             619-99999819-9776420388779799999963786774999899979889999999999999988756589981320


Q ss_pred             CHH---HHCC---CC---CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC
Q ss_conf             101---1025---45---56857999700120017665--1544567788876541144577831232001123210334
Q gi|254780153|r  172 SAV---FARH---ID---FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF  240 (391)
Q Consensus       172 Ss~---g~~p---~d---~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (391)
                      =+-   .+.+   ..   ..+--+.+.|.-|.++ .||  +|.++..++.+++......                     
T Consensus       201 Y~~l~~~g~~~~~~~~~~~~~~~I~~~S~SK~~~-~~G~RiG~~i~~~~~i~~~~~~~~---------------------  258 (381)
T PRK06375        201 YEDLIYRGKLFSPASIPEAFDKTITLNGFSKGYA-MTGWRIGYMVAPEEIVEAANKIQQ---------------------  258 (381)
T ss_pred             HHHHCCCCCCCCHHHHHHHHCCEEEEEHHHHHHH-CCCCCEEEEEECHHHHHHHHHHHH---------------------
T ss_conf             5755169987785340211065799841022433-146555999838999999999997---------------------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf             78644666448899999999862010318999999997799999998747971676688200365317898247310113
Q gi|254780153|r  241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL  320 (391)
Q Consensus       241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~  320 (391)
                        .+....+...-++...+++   ....++.+.+.++++.+.+++.+++..++....++-.       .+...+-. ...
T Consensus       259 --~~~~~~~~~~q~aa~~al~---~~~~~~~~~~~~~~rr~~~~~~l~~~~~~~~~~P~G~-------~~~~~~~~-~~~  325 (381)
T PRK06375        259 --QTITCASSISQYAALRALD---DDESPKHMREEFEKRRDLVVSILKESDNLHVYEPEGA-------FYVFPGYE-SDI  325 (381)
T ss_pred             --HCCCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEE-------EEEEEECC-CCC
T ss_conf             --5446756299999999962---8277999999999999999999851899779567814-------89956079-998


Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             734567888999998886282872665-567675-0568615888999999999999999999
Q gi|254780153|r  321 DINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      +.   ..   -...++.+.|+++--|. +...+. -+||+..  .+.+.++.-++-|+.+++.
T Consensus       326 ~~---~~---~~~~ll~~~gV~v~PG~~Fg~~g~~~~Ri~~a--~~~e~l~ea~~RL~~~~~~  380 (381)
T PRK06375        326 KS---YK---AAENLLENKNVVVTPGSAFGRQGEHHFRISFA--TSEDIIKEGIERIGKFFKS  380 (381)
T ss_pred             CH---HH---HHHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf             98---99---99999985999997873548899997999981--9999999999999999985


No 107
>PRK07683 aminotransferase A; Validated
Probab=99.24  E-value=7.6e-08  Score=69.26  Aligned_cols=327  Identities=15%  Similarity=0.101  Sum_probs=173.1

Q ss_pred             CCCCCCCCCCCCC-CHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHH
Q ss_conf             9988868887768-96899998632103----6532898899999999999999968899--857999748734899987
Q gi|254780153|r   11 PKRPFFSSGPCAK-RPGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPE--NYRIAIVPASDTGAVEMA   83 (391)
Q Consensus        11 p~~~~F~pGP~~~-~p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~--~y~v~~l~GsgT~~~ea~   83 (391)
                      |+-.+|+-|=-.. +|..+.+++.+.+-    ++++ +.-..++-+.+.+.+++-++.+-  +.+|++ +.|++.++..+
T Consensus        28 ~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~~~Y~~-~~G~~~lreaia~~~~~~~g~~~~~~~~I~i-t~G~~~al~~~  105 (387)
T PRK07683         28 DNLISLTIGQPDFPTPSHVKEAAKRAIDENYTSYTH-NAGLLELRKAACNFVKDKYDLHYSPESEIIV-TIGASEAIDIA  105 (387)
T ss_pred             CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE-ECCHHHHHHHH
T ss_conf             991899999899997899999999998579998899-9887999999999999985899898875999-27829999999


Q ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE--
Q ss_conf             532057897079970736888887653238763067405777657867678-----5565799742024202203203--
Q gi|254780153|r   84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG--  156 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~--  156 (391)
                      +..++.+||.+++-.=.|..- ...+...+...+.+...+.|...+.+.++     ..+.+.++.-..-||...+..+  
T Consensus       106 ~~~~~~pGD~Vlv~~P~Y~~~-~~~~~~~g~~~v~v~~~~~~~~~d~~~le~~~~~~~k~iil~~P~NPtG~v~s~e~l~  184 (387)
T PRK07683        106 FRTILEPGTEVILPAPIYPGY-EPIIRLCGATPVFIDTRETGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELK  184 (387)
T ss_pred             HHHHCCCCCEEEECCCCCCCH-HHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHH
T ss_conf             999769999899837876656-9999970872353687867887899999973552575786479959897887899999


Q ss_pred             ---EECCCCCCEEEEEECCHHHH---CCC---CCC---CCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCC
Q ss_conf             ---50256861488640110110---254---556---8579997001200176651--544567788876541144577
Q gi|254780153|r  157 ---FIPESREGLVICDATSAVFA---RHI---DFN---KLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       157 ---~~~~~~~~llivD~vSs~g~---~p~---d~~---~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~  222 (391)
                         .+|.+++.++|.|-+=+-..   .+.   ...   .--+++.|.-|.++ .||+  |.++..++.+++.....    
T Consensus       185 ~i~~la~~~~i~ii~DEiY~~l~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~i~~~~~~~~~~~~~~----  259 (387)
T PRK07683        185 DIANVLKDKNIFVLSDEIYSELVYDQPHTSIAHFPEMREKTIVINGLSKSHS-MTGWRIGFLFAPSYLAKHILKVH----  259 (387)
T ss_pred             HHHHHHHCCCCEEECCCCHHHHHCCCCCCCHHHCCCCCCEEEEEECCCCCCC-CCCCCEEEEECCHHHHHHHHHHH----
T ss_conf             9999761369447546513554069987764334455540367504410136-76522799975999999999999----


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                                 +        .+...++...-++...++..-.+  -++.+.+.++++.+.+++.+...+ +...  .|+ 
T Consensus       260 -----------~--------~~~~~~~~~~q~aa~~al~~~~~--~~~~~~~~~~~r~~~~~~~L~~~g-~~~~--~P~-  314 (387)
T PRK07683        260 -----------Q--------YNVTCASSISQYAALEALTAGKD--DAKMMRHQYKKRRDYVYNRLISMG-LDVE--KPT-  314 (387)
T ss_pred             -----------H--------HCCCCCCHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHCC-CCEE--CCC-
T ss_conf             -----------7--------56578868999999999976988--999999999999999999998769-9556--788-


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             365317898247310113734567888999998886282872665-5676750-56861588899999999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                       +..-+-..++....   +.   ..+   ....+.+.|+++--|. +...+++ +|++..  .+++.++.-++-|+.+++
T Consensus       315 -G~~~~w~~~~~~~~---~~---~~~---~~~ll~~~gV~v~PG~~Fg~~g~g~~Rlsfa--~~~e~l~eal~Rl~~~l~  382 (387)
T PRK07683        315 -GAFYIFPSIGHFTM---SS---FDF---ALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQ  382 (387)
T ss_pred             -EEEEEEEECCCCCC---CH---HHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf             -12799678788899---97---999---9999983999998784228899886999971--999999999999999999


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r  381 FQ  382 (391)
Q Consensus       381 ~~  382 (391)
                      +.
T Consensus       383 ~~  384 (387)
T PRK07683        383 KK  384 (387)
T ss_pred             HH
T ss_conf             87


No 108
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.24  E-value=9.4e-08  Score=68.67  Aligned_cols=296  Identities=14%  Similarity=0.041  Sum_probs=171.3

Q ss_pred             HHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHHHHH------CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             999986321036---53289889999999999999996------889985799974873489998753205789707997
Q gi|254780153|r   27 WSLGILEGALLG---RSHRCVLGKERINKAIQLTRKVL------EVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        27 ~v~~~~~~~~l~---~sHRs~~f~~i~~~~~~~l~~l~------~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      .+++++...+-.   .-||=|+-.  ..+.++.|.+++      +++.+ .|++ ..|+...+..++..++++|+.+++.
T Consensus        43 ~~~~ai~~a~~~~~~~~nrYPd~~--~~~Lr~alA~~l~~~~~~gv~~e-~Ii~-gnGSdE~i~~i~~af~~pGd~vl~~  118 (369)
T PRK03317         43 ALVDDIARAVREAAAGLNRYPDRD--AVALRTDLAAYLTAQTGVGLGVE-NVWA-ANGSNEILQQLLQAFGGPGRSALGF  118 (369)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHCCCCCCCHH-HEEE-CCCHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             999999999997665247289974--89999999987503026797877-8788-2689999999999982899989974


Q ss_pred             ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CC--CCCEEEEEEECCCCEEECCEEE---ECCCCCCEEEE
Q ss_conf             073688888765323876306740577765786767----85--5657997420242022032035---02568614886
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DF--DRDVVFVWNGTTSGVCVPDVGF---IPESREGLVIC  168 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~--~~~v~~~h~ETstGv~~~~~~~---~~~~~~~lliv  168 (391)
                      .-.|+..  ...++..+..+.......+...+++.+    ..  .+.+.+|.=..-||...+..++   +....+.++|+
T Consensus       119 ~Ptf~~Y--~~~a~~~g~~~v~v~~~~df~~d~d~l~~ai~~~~~klv~l~nPNNPTG~~~~~~~l~~i~~~~~~~~vvv  196 (369)
T PRK03317        119 VPSYSMH--PIIARGTHTEWVAAPRAADFGLDVDAAVAAIREHRPDVVFLTSPNNPTGTALPLDDVEALLDAAPPGIVVV  196 (369)
T ss_pred             CCCHHHH--HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEECCHHHHHHHHHHCCCCEEEE
T ss_conf             7860279--99998709779993678788839999999863269858997589998771237899999998588777994


Q ss_pred             EECC-HHHHCC----CC-CCCC-EE-EEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf             4011-011025----45-5685-79-997001200176651--5445677888765411445778312320011232103
Q gi|254780153|r  169 DATS-AVFARH----ID-FNKL-DV-VTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG  238 (391)
Q Consensus       169 D~vS-s~g~~p----~d-~~~i-Dv-~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (391)
                      |-.= .|....    ++ ..+. .+ +.-+--|.+| -+|+  |.++.+++.++.+.+.+.                   
T Consensus       197 DEAY~ef~~~~~~s~~~l~~~~~nlivlRTfSK~~g-LAGlRlGy~ia~~~~i~~l~~~~~-------------------  256 (369)
T PRK03317        197 DEAYAEFSRQGTPSALTLLPGYPRLVVSRTMSKAFA-FAGGRLGYLAAAPAVIDALRLVRL-------------------  256 (369)
T ss_pred             CCCHHHHHCCCCCCHHHHHHCCCCEEEEECCHHHHC-CCCHHHEEEECCHHHHHHHHHHCC-------------------
T ss_conf             387798615688766788613797899941058644-665331410069999999998448-------------------


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf             34786446664488999999998620103189999999977999999987479716766882003653178982473101
Q gi|254780153|r  239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA  318 (391)
Q Consensus       239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~  318 (391)
                            ++..+.....+...+|+.-   .-+....+...+..+.+++++...+ +..+      -|.+|..+.-.-.   
T Consensus       257 ------p~~vn~~a~~aa~aaL~d~---~~~~~~~~~i~~~R~~l~~~L~~lg-~~v~------pS~aNFil~~~~~---  317 (369)
T PRK03317        257 ------PYHLSAVTQAAARAALRHA---DETLASVAALRAERDRVVAWLRELG-FRVA------PSDANFVLFGRFA---  317 (369)
T ss_pred             ------CCCCCHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEEECCC---
T ss_conf             ------9886799999999997499---9999999999999999999999783-9788------8988779996379---


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             1373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                        +       ...+...|.++|+++.--+   .+..+||+++   ++++.++|+++|+.+++..
T Consensus       318 --~-------~~~~~~~L~~~gIlVR~~g---~~~~lRisig---t~een~~~l~al~~il~~~  366 (369)
T PRK03317        318 --D-------AHAVWQRLLDRGVLIRDVG---IPGWLRVTIG---TPEENDAFLDALAEVLATE  366 (369)
T ss_pred             --C-------HHHHHHHHHHCCCEECCCC---CCCCEEEECC---CHHHHHHHHHHHHHHHHCC
T ss_conf             --9-------9999999996896892289---9893799619---9999999999999997227


No 109
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.24  E-value=1.4e-08  Score=73.96  Aligned_cols=284  Identities=13%  Similarity=0.096  Sum_probs=163.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+-+...    .++.+||-+|+.+++++++++|+.+++...-||.-  +.+...+..+.+++.+
T Consensus        63 ~nPT~~~lE~~l---a~LEg~~~----a~~~sSGmaAi~~~ll~ll~~Gd~vv~~~~~Yg~T~~~~~~~l~~~Gi~v~f~  135 (394)
T PRK07050         63 ATPTSLALAQRL---AEIEGGRH----ALLQPSGLAAISNVYFGLVKAGDDVLIPDNVYGPNRDFGEWLAKDFGITVRFY  135 (394)
T ss_pred             CCHHHHHHHHHH---HHHHCCCE----EEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             886599999999---99829974----99965789999999999607998578356663338999998753188799997


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CE--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--565799742024202203---20--3502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DV--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.+.++.  .+...+++.||.+--.+.   +.  ..+++.+++++|||-+  +-+...|++ .+.|+++-|.
T Consensus       136 d~~-----d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~ia~~A~~~g~~~vVDNT~atP~~~~Pl~-~GaDiVihS~  209 (394)
T PRK07050        136 DPM-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTWSAGLAFKPFE-HGVDISVQAL  209 (394)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-CCCCEEEEEC
T ss_conf             999-----9899984368664499984489876254372999999987598699857866865006310-4698999506


Q ss_pred             HHCCCCCCCC--EEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             1200176651--544567788-8765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG  268 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG  268 (391)
                      -|-++|-..+  |.|+.+++. .++....            .        ...|.   +++-+.-|.+...|      ..
T Consensus       210 TKyi~GHsDvl~G~vv~~~~~~~~~l~~~------------~--------~~~G~---~~sp~~a~l~~rGL------~T  260 (394)
T PRK07050        210 TKYQSGGSDVLMGATITADAELHAKLKLA------------R--------MRLGI---GVSADDCSLVLRGL------PS  260 (394)
T ss_pred             CEEECCCCCCCCCCEECCCHHHHHHHHHH------------H--------HHCCC---CCCHHHHHHHHCCC------CC
T ss_conf             63443788876773656999999999999------------9--------86267---78989999997489------84


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------------CC-CCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             899999999779999999874797167668820-------------03-6531789824731011373456788899999
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQENDWIENLAVDET-------------TR-SNTSICMKIVDSDIASLDINSQKSFCKSMLS  334 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~-------------~r-S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~  334 (391)
                      +.-|.+||.+++..+-+|++.++..... ..|.             .. ......|.+....        .......+..
T Consensus       261 L~lRm~r~~~nA~~lA~~L~~hp~V~~V-~yPgL~s~p~h~~a~~~~~g~gg~~s~~~~~~~--------~~~~~~~f~~  331 (394)
T PRK07050        261 MQVRFDAHSRSALELAQWLKARPEIATV-LHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--------DAAQVDAFVE  331 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEEE-ECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC--------CHHHHHHHHH
T ss_conf             7888999999999999998618981089-899988981599999757999628999975667--------9999999998


Q ss_pred             HHHHCCEEECCCCCCCC-----------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             88862828726655676-----------------750568615888999999999999999999
Q gi|254780153|r  335 FLEKEEIAYDIGSYRDA-----------------PLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       335 ~l~~~g~~~~~~~~r~~-----------------~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .|.--..+..+|+..+.                 +.-+|++++=    ||++.|++=|+.|++.
T Consensus       332 ~l~l~~~a~SlGg~eSL~~p~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~DL~qAL~a  391 (394)
T PRK07050        332 ALELFAIGWSWGGACSLAMPYDVASMRTGKWPHRGTLVRFYIGL----EDEADLRADLEQALQA  391 (394)
T ss_pred             HCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC----CCHHHHHHHHHHHHHH
T ss_conf             38826550264576647458976555620027899869999411----9999999999999997


No 110
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.23  E-value=3.7e-08  Score=71.25  Aligned_cols=323  Identities=14%  Similarity=0.105  Sum_probs=177.0

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC----CCC-CEEEEE
Q ss_conf             968999986321036532898899-99999999999996889985799974873489998753205----789-707997
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL----GYR-GVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~----~~~-~~~~~~   97 (391)
                      +|+ +.++++.++-...|-+..|. ..-.+.-+.|.++.  |.+..-+|+..||+.++|+++.=..    ..| ...+..
T Consensus       109 ~P~-I~eAv~~Ql~~~~~~s~~~~~p~~~~LAe~L~~~~--P~~l~~vFF~nSGSEAvE~AiKlAr~y~~~~Gr~~IIs~  185 (468)
T PRK11522        109 NPV-VVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALT--PGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAT  185 (468)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             989-99999999853575127727669999999999748--888897973797289999999999997774099189997


Q ss_pred             ECCHHHHHHHHHHHCCCCC---------EEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCC---EEECC------
Q ss_conf             0736888887653238763---------06740577765786767-----8556579974202420---22032------
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQD---------VREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSG---VCVPD------  154 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstG---v~~~~------  154 (391)
                      .++|-++-..-..--+...         ......|++....++..     .....++.+-.|+..|   +..|.      
T Consensus       186 ~~sYHG~T~galS~tg~~~~~~~f~pl~p~~~~vp~~d~~~~~~~~~~~~~~~~~vAAvIvEPIqG~gGv~~pp~~yl~~  265 (468)
T PRK11522        186 SGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPPGYLTA  265 (468)
T ss_pred             CCCCCCCCCHHHEECCCHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             17867764222031276210257778999845637899999999999865148968999997776778982699899999


Q ss_pred             EEEECCCCCCEEEEEECCHHHHCCCCC-----CCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             035025686148864011011025455-----68579997001200176-651544567788876541144577831232
Q gi|254780153|r  155 VGFIPESREGLVICDATSAVFARHIDF-----NKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIFR  228 (391)
Q Consensus       155 ~~~~~~~~~~llivD~vSs~g~~p~d~-----~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~~  228 (391)
                      .+.+|+++++++|+|=|.+=.++-=.|     .++-=.+...-|+|++= -=++.++.+++..+....   . +      
T Consensus       266 lr~lc~~~giLLI~DEVqTGfGRTG~~fa~e~~gV~PDivt~aKgLggG~~Pigav~~~~~i~~~~~~---~-~------  335 (468)
T PRK11522        266 VRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD---N-P------  335 (468)
T ss_pred             HHHHHHHCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHH---C-C------
T ss_conf             99987538078822641227886578514523678988899615555787750589762999999851---7-7------


Q ss_pred             CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCE
Q ss_conf             0011232103347864466644889999999986201031899999999779999999874797167-668820036531
Q gi|254780153|r  229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETTRSNTS  307 (391)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~rS~~~  307 (391)
                                ...++|+.--|+ ...+...+|+.++++.    ...+.+++.+.+.+.++....-.+ ++.+  .|....
T Consensus       336 ----------~~hg~Tf~GnPl-acAaala~L~ii~~e~----l~~~a~~~G~~L~~~L~~l~~~~p~~i~d--VRG~GL  398 (468)
T PRK11522        336 ----------FLHTTTFGGNPL-ACAAALATINVLLEQN----LPAQAEQKGDMLLDGFRQLAREYPDLVQE--ARGKGM  398 (468)
T ss_pred             ----------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE--EEECCE
T ss_conf             ----------744667679979-9999999999998645----99999999999999999998768671125--100316


Q ss_pred             EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             78-98247310113734567888999998886282872665567675056861588899999999999999999999987
Q gi|254780153|r  308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF  386 (391)
Q Consensus       308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~  386 (391)
                      .. +.+.++.           ....+...+.++|+++...+.  -+..+|+.--=.++.++|+.++++|+.++.+++.++
T Consensus       399 m~giel~~~~-----------~~~~v~~~~~~~Gvlv~~~~~--~~~~lr~~PPL~It~eeid~~l~~l~~aL~~l~~~~  465 (468)
T PRK11522        399 LMAIEFVDNE-----------IGYNFASEMFRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVIKAARKALAAMRVSV  465 (468)
T ss_pred             EEEEEECCCC-----------HHHHHHHHHHHCCEEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999957850-----------089999999978919987489--998899959965799999999999999999997550


Q ss_pred             HHH
Q ss_conf             751
Q gi|254780153|r  387 LRA  389 (391)
Q Consensus       387 ~~~  389 (391)
                      .+|
T Consensus       466 ~~~  468 (468)
T PRK11522        466 EEA  468 (468)
T ss_pred             HCC
T ss_conf             129


No 111
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23  E-value=1.3e-07  Score=67.70  Aligned_cols=312  Identities=14%  Similarity=0.092  Sum_probs=163.2

Q ss_pred             CHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHC------C-CCC-C
Q ss_conf             9689999863210365328--988999999999999999688998-579997487348999875320------5-789-7
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHR--CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSL------L-GYR-G   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl------~-~~~-~   92 (391)
                      +|+ |.+++.+++=...|-  +....+...+.-+.|.+++  |.+ .+|+ +..||+.|+|+++.=.      - .++ .
T Consensus        62 ~p~-i~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~-f~~SGsEAvE~AiKlA~~y~~~~g~~~r~  137 (429)
T PRK06173         62 HPR-LNAAATNQLSKMSHIMFGGFTHEPAVELAQLLLEIL--PPELNKIF-FADSGSVAVEVAMKMALQYQQAKGEVQRT  137 (429)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEE-ECCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             899-999999999757785567757779999999999847--97758799-71865999999999999999972898765


Q ss_pred             EEEEEECC-HHHHHHHHHH-----HCCCCC----EEEE-----ECCCCCCCC---HHHC----C-CCCCEEEEEEECC--
Q ss_conf             07997073-6888887653-----238763----0674-----057776578---6767----8-5565799742024--
Q gi|254780153|r   93 VDVLAWES-FGLGWMSDIR-----QLSLQD----VREF-----TAPYGSLPD---FSKV----D-FDRDVVFVWNGTT--  147 (391)
Q Consensus        93 ~~~~~~g~-~~~r~~~~~~-----~~~~~~----~~~~-----~~~~g~~~~---~~~~----~-~~~~v~~~h~ETs--  147 (391)
                      ..+...++ .|.-+.....     ......    ....     ..+.+....   ++.+    + ....++.+-.|..  
T Consensus       138 ~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAavi~EPi~q  217 (429)
T PRK06173        138 KFATIRSGYHGDTWHAMSVCDPVTGMHGLFNSSLPVQYFLPQPSVKFGEAWRDEAIEPLQDLLEQHGDEIAALILEPVVQ  217 (429)
T ss_pred             EEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf             26750588588757677605764466666678898653468998765654227799999999985588636999986446


Q ss_pred             --CCEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCC-CCCEEEEECHHHH
Q ss_conf             --2022032------035025686148864011011025---4--55685--79997001200176-6515445677888
Q gi|254780153|r  148 --SGVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGE-AGFGIIILSPASV  211 (391)
Q Consensus       148 --tGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~p-pGl~~v~~s~~al  211 (391)
                        -|+..+.      ...+|+++++++|+|=|.+=.++-   +  +..++  |++..+  |+|++= .-++.++.+++..
T Consensus       218 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDivt~g--KglggG~~P~~avi~~~~i~  295 (429)
T PRK06173        218 GAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIG--KALTGGYLTLSATITTEEIA  295 (429)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEC--CCCCCCCCCEEEEEECHHHH
T ss_conf             7898667899999999987512485577301320687366844532368999789855--44568877617898768999


Q ss_pred             HHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             76541144577831232001123210334786446664488999999998620103189999999977999999987479
Q gi|254780153|r  212 ERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND  291 (391)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~  291 (391)
                      +....    +.. ..            ...++|+.--| ....+...+|+.++++.    ...+.+++.+.+++.+....
T Consensus       296 ~~~~~----g~~-~~------------f~hg~T~~Gnp-la~Aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~~~  353 (429)
T PRK06173        296 QTICS----GEA-KC------------FMHGPTFMANP-LACAIAAESIRLLLESP----WQQNIQRIERQLRQELSPAA  353 (429)
T ss_pred             HHHCC----CCC-CC------------CCCCCCCCCCH-HHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHC
T ss_conf             64246----876-66------------35278998689-99999999999998646----99999999999999999631


Q ss_pred             CCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf             716766882003653178-9824731011373456788899999888628287266556767505686158889999999
Q gi|254780153|r  292 WIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLL  370 (391)
Q Consensus       292 ~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~  370 (391)
                      -. +.+.+  .|+...+. +.+.+|.           ..+.+...+.++|+++..     .++.+|+.--=.++.++|+.
T Consensus       354 ~~-~~v~d--VRG~Gl~~~iel~~~~-----------~~~~l~~~~~~~Gll~~~-----~g~~l~l~PPL~it~~ei~~  414 (429)
T PRK06173        354 EF-DYVAE--VRVLGAIGVVEMKSPV-----------DMATLQPRFVEHGIWVRP-----FGKLVYLMPPFIISQDELTQ  414 (429)
T ss_pred             CC-CCEEE--ECCCCEEEEEEECCCC-----------CHHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHH
T ss_conf             69-96687--4235729999946845-----------699999999969958983-----49989995893689999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  371 LCDWLRWVFYFQ  382 (391)
Q Consensus       371 L~~aLe~~~~~~  382 (391)
                      ++++|+.++.++
T Consensus       415 ~~~~l~~aL~e~  426 (429)
T PRK06173        415 LTSGLLRVLTQE  426 (429)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999998


No 112
>PRK08068 transaminase; Reviewed
Probab=99.23  E-value=5.9e-08  Score=69.96  Aligned_cols=318  Identities=14%  Similarity=0.128  Sum_probs=172.8

Q ss_pred             CCCCCCCC-CCCCCHHHHHHHHHHHCCC-CCCC-CH--HHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHH
Q ss_conf             98886888-7768968999986321036-5328-98--8999999999999999688998--579997487348999875
Q gi|254780153|r   12 KRPFFSSG-PCAKRPGWSLGILEGALLG-RSHR-CV--LGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMAL   84 (391)
Q Consensus        12 ~~~~F~pG-P~~~~p~~v~~~~~~~~l~-~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~   84 (391)
                      +=.+|+-| |.--+|..+++++...+.+ .+|+ ++  =..++-+.+-+.+++-++.+-+  .+| +++.|++.++..++
T Consensus        33 ~vi~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~p~~eI-~vt~Ga~~al~~~~  111 (389)
T PRK08068         33 DVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEV-AILFGGKAGLVELP  111 (389)
T ss_pred             CCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHH
T ss_conf             91899998899998999999999997387678889985809999999999999868998988809-98278899999999


Q ss_pred             HHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-
Q ss_conf             320578970799707368888876532387630674--057776578676785-----565799742024202203203-
Q gi|254780153|r   85 WSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-  156 (391)
Q Consensus        85 ~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-  156 (391)
                      .-++++||.+++-.=.|-.-+ ..+. ..+..+..+  ..+.+..+++++++.     .+.+.++.=..-||...+..+ 
T Consensus       112 ~al~~pGD~Vlv~~P~Yp~y~-~~~~-~~g~~~~~vpl~~~~~~~~d~e~l~~~i~~~tk~iil~~P~NPTG~v~~~~~l  189 (389)
T PRK08068        112 QCLLNPGDTALVPDPGYPDYL-SGVA-LARAQFETMPLIAENNFLPDYEKIPESVAEKAKLMYLNYPNNPTGAVATKAFF  189 (389)
T ss_pred             HHHCCCCCEEEECCCCCCCHH-HHHH-HCCCEEEEEECCCCCCCCCCHHHHHHHCHHCCEEEEECCCCCCCCHHCCHHHH
T ss_conf             996699998998078898649-9999-71875689963666798689999987431046599988997984612059999


Q ss_pred             ----EECCCCCCEEEEEECCHH----HHCCCC------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCC
Q ss_conf             ----502568614886401101----102545------56857999700120017665--15445677888765411445
Q gi|254780153|r  157 ----FIPESREGLVICDATSAV----FARHID------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPS  220 (391)
Q Consensus       157 ----~~~~~~~~llivD~vSs~----g~~p~d------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~  220 (391)
                          .+|..++..+|.|-+=+-    +..|..      ....-+.+.|.-|.++ .||  +|.++.+++.+++....+..
T Consensus       190 ~~l~~la~~~~i~visDEiY~~l~~~~~~p~s~l~~~~~~~~~I~~~S~SK~~~-~~G~RiG~~v~~~~~i~~l~~~~~~  268 (389)
T PRK08068        190 EETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIEIYTLSKTFN-MAGWRVAFAVGNESVIEAINLLQDH  268 (389)
T ss_pred             HHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCEEEEEECCHHHHHHHHHHCCC
T ss_conf             999998710777999626521114678766411036532013406610356557-8631179997799999999973025


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE  300 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~  300 (391)
                                            .+..+++. .-++...+|..-  +.=++.+.++++++.+.+++.+++.+ +....++ 
T Consensus       269 ----------------------~~~~~~~~-~q~aa~~al~~~--~~~~~~~~~~~~~rr~~~~~~l~~~g-~~~~~P~-  321 (389)
T PRK08068        269 ----------------------LFVSLFGA-IQDAAIEALLSD--QSCVQELVARYESRRNAFISACREIG-WEVDAPK-  321 (389)
T ss_pred             ----------------------CEECCCHH-HHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC-
T ss_conf             ----------------------30047849-999999998688--88999999999999999999999759-7605888-


Q ss_pred             CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             003653178982473101137345678889999988-86282872665-5676750-5686158889999999999999
Q gi|254780153|r  301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                         +..-+-+.+++.    .+       ..++...+ .+.|+++--|. +...+.+ +|++.  ..++++++.-++-|.
T Consensus       322 ---G~~y~w~~~~~~----~~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~vRl~f--a~~~e~l~ea~~RL~  384 (389)
T PRK08068        322 ---GSFFAWMPVPKG----YT-------SEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGL--LIDEERLREAINRIA  384 (389)
T ss_pred             ---EEEEEEEECCCC----CC-------HHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEE--ECCHHHHHHHHHHHH
T ss_conf             ---135997868999----89-------8999999997099999878543789969699998--389999999999997


No 113
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23  E-value=1.1e-07  Score=68.22  Aligned_cols=335  Identities=11%  Similarity=0.050  Sum_probs=175.0

Q ss_pred             CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCCC-E
Q ss_conf             96899998632103653289--88999999999999999688998579997487348999875320------5-7897-0
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYRG-V   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~~-~   93 (391)
                      +|+ |.+++.+++-..+|-.  .--.+...+.-++|.++  +|.+..-+|+..||+.|+|+++.=-      - .++. .
T Consensus        65 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~elAe~L~~~--~P~~l~~v~f~~SGSEAvE~AiKlAr~y~~~~g~~gr~~  141 (467)
T PRK07030         65 NPR-INQRIKDQVDQLEHVILAGFSHQPVIELSERLVKI--TPAGLDRVFYADNGSSAIEVALKMSFHYWRNRGKPRKKR  141 (467)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH--CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             699-99999999975777245776877999999999973--888868799837848999999999999999808988707


Q ss_pred             EEEEECCHHHHHHHHHHHCCC-----------CCEEEEECCC------CCCCC------HHHC-----CCCCCEEEEEEE
Q ss_conf             799707368888876532387-----------6306740577------76578------6767-----855657997420
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSL-----------QDVREFTAPY------GSLPD------FSKV-----DFDRDVVFVWNG  145 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~~~~------g~~~~------~~~~-----~~~~~v~~~h~E  145 (391)
                      ++...++|=++...-..--+.           .++.....|.      +...+      ++.+     +....++.+-.|
T Consensus       142 iis~~~sYHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~~g~~~~~~~~~~~~~le~~l~~~~~~iAAvi~E  221 (467)
T PRK07030        142 FVTLTNSYHGETIAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRNMFAHMEQTLAEHHDEIAAVIVE  221 (467)
T ss_pred             EEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             98733734342177776348701147877878886675898643566788889999999999999998479974699982


Q ss_pred             C-C--C-CEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCC-CCCEEEEEC
Q ss_conf             2-4--2-022032------035025686148864011011025---4--55685--79997001200176-651544567
Q gi|254780153|r  146 T-T--S-GVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGE-AGFGIIILS  207 (391)
Q Consensus       146 T-s--t-Gv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~p-pGl~~v~~s  207 (391)
                      . .  . |+..|.      ...+|+.+++|+|+|=|.+=.++-   +  +.+++  |++  ..-|+|++= -=++.++.|
T Consensus       222 Piiqg~GG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDii--t~aKgl~gG~~Pl~av~~~  299 (467)
T PRK07030        222 PLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL--CLSKALTGGYLPLAAVLTT  299 (467)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCCCCCCCCCCEE--EEECCCCCCCCCEEEEEEC
T ss_conf             32336799727998999999999975594687250031786245853200567899889--9704311687753899874


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r  208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI  287 (391)
Q Consensus       208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i  287 (391)
                      ++..+....-...        +.       ....++|+.--|+ ...+..++|+.+++++    ..++.++..+.+.+.+
T Consensus       300 ~~I~~~~~~~~~~--------~~-------~~~Hg~Ty~GnPl-acAAala~L~ii~~e~----l~~~~~~~g~~l~~~l  359 (467)
T PRK07030        300 DTVYQAFYDDYPT--------LR-------AFLHSHSYTGNPL-ACAAALATLDIFEQDN----VIEANRALARRMAEAT  359 (467)
T ss_pred             HHHHHHHHCCCCC--------CC-------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf             8999876325655--------55-------7675889997999-9999999999999768----9999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             74797167668820036531789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r  288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED  367 (391)
Q Consensus       288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d  367 (391)
                      +++.. .+.+.+-..+..+.-.=.+.|+.... ...........+...+.++|+++..     .+..+|+.--=.++.++
T Consensus       360 ~~l~~-~p~VgdVRG~GL~~giElv~d~~t~~-p~~~~~~~~~~v~~~~~~~G~l~~~-----~gnvi~~~PPL~it~~e  432 (467)
T PRK07030        360 AHLAD-HPHVAEVRQTGMALAIEMVQDKASKT-PYPWQERRGLKVYQHALERGALLRP-----LGSVVYFLPPYVITPEQ  432 (467)
T ss_pred             HHHHC-CCCEEEEECCCCEEEEEEECCCCCCC-CCCHHHHHHHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHH
T ss_conf             98707-99758883475199999703787678-8854667999999999978988973-----49999997992789999


Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHC
Q ss_conf             999999999999999-99877511
Q gi|254780153|r  368 LLLLCDWLRWVFYFQ-KISFLRAI  390 (391)
Q Consensus       368 v~~L~~aLe~~~~~~-k~~~~~~~  390 (391)
                      ++.+++.|+.++.++ |.++.-|+
T Consensus       433 id~~~~~l~~al~~a~~e~v~~~~  456 (467)
T PRK07030        433 IDFLAEVASEGIDIATRDSVSVAV  456 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999986777765


No 114
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.23  E-value=4.2e-08  Score=70.89  Aligned_cols=317  Identities=16%  Similarity=0.067  Sum_probs=159.3

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--------CCCCEEE
Q ss_conf             96899998632103653289889999999999999996889985799974873489998753205--------7897079
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--------GYRGVDV   95 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--------~~~~~~~   95 (391)
                      +|+ |.+++.+++-...|-+..|..  +...+...++...+-..+|+| ..||+.++|+++.=..        ..+..++
T Consensus        57 ~p~-v~~Ai~~q~~~l~~~~~~~~~--~~~~~la~~L~~~~~~~~v~f-~~SGsEAve~AiKlAr~~~~~~~~~~r~~Ii  132 (406)
T PRK12381         57 HPA-LREALNEQASKFWHTGNGYTN--EPVLRLAKKLIDATFADRVFF-CNSGAEANEAALKLARKYAHDRYGNHKSGIV  132 (406)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHHHHCCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             899-999999998655667787368--899999999873058764999-4877789999999999999863899987699


Q ss_pred             EEECCHHHHHHHHHHHCCCCCEEEEECC--CC----CCCCHHHCCC--CCCEEEEEEECCCC---EEECC------EEEE
Q ss_conf             9707368888876532387630674057--77----6578676785--56579974202420---22032------0350
Q gi|254780153|r   96 LAWESFGLGWMSDIRQLSLQDVREFTAP--YG----SLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD------VGFI  158 (391)
Q Consensus        96 ~~~g~~~~r~~~~~~~~~~~~~~~~~~~--~g----~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~------~~~~  158 (391)
                      ...++|-++...-...-+.........|  .+    ...+++....  .+.++.+-.|...|   +..+.      ...+
T Consensus       133 ~~~~~yHG~t~~~~s~~g~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAvivEPiqg~gG~~~~~~~yl~~lr~l  212 (406)
T PRK12381        133 AFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVEPIQGEGGVIPADKAFLQGLREL  212 (406)
T ss_pred             EECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf             96787678832232157873335677889974435652229999997388835999906456688326898999999975


Q ss_pred             CCCCCCEEEEEECCH-HH--HCCCCC--CCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             256861488640110-11--025455--685--79997001200176651544567788876541144577831232001
Q gi|254780153|r  159 PESREGLVICDATSA-VF--ARHIDF--NKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       159 ~~~~~~llivD~vSs-~g--~~p~d~--~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      |+++++++|+|=|.+ +|  +.-+-+  .++  |++  ...|+|++=-=++.++.+++..+...                
T Consensus       213 c~~~gillI~DEV~tG~GRtG~~~a~~~~gv~PDiv--~~gK~lggG~P~sav~~~~~i~~~~~----------------  274 (406)
T PRK12381        213 CDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTEKYASVMT----------------  274 (406)
T ss_pred             EECCCCEEECCCCEECCCCCCCCCCCCCCCCCCCEE--EECCCCCCCCEEEEEEECHHHHHHCC----------------
T ss_conf             211583797444200777666765354667899889--97420248860489987288786528----------------


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf             123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M  310 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~  310 (391)
                            ....++|+..-|+. ..+..++|+.++++.=+++..++.+...+.+.+..++.    +.+.  +.|...... +
T Consensus       275 ------~~~h~~T~~gnpla-~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~----~~i~--dVRG~GLm~gi  341 (406)
T PRK12381        275 ------VGTHGTTYGGNPLA-SAVAGKVLDLINTPEMLNGVKQRHDWFVERLNTINARY----GLFS--EIRGLGLLIGC  341 (406)
T ss_pred             ------CCCCCCCCCCCHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC----CCEE--EEEECCEEEEE
T ss_conf             ------88766389869999-99999999999755699999999999999999988738----9888--63025269999


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             82473101137345678889999988862828726655676750568615888999999999999999999999877511
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLRAI  390 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~~~  390 (391)
                      .+.++..         ...+.+...+.++|+++...+    ++.+|+.--=.++.++|+.+++.|+.++.+   -+.|++
T Consensus       342 el~~~~~---------~~~~~l~~~~~~~Gll~~~~g----~n~irl~PPL~it~~eid~~l~~l~~al~~---v~~~~~  405 (406)
T PRK12381        342 VLNAEYA---------GKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNVSEEEIATGLDRFARACER---FVSRGS  405 (406)
T ss_pred             EECCCCC---------CHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH---HHHCCC
T ss_conf             9648875---------359999999997996996079----996999799538999999999999999999---996428


Q ss_pred             C
Q ss_conf             9
Q gi|254780153|r  391 S  391 (391)
Q Consensus       391 ~  391 (391)
                      |
T Consensus       406 ~  406 (406)
T PRK12381        406 S  406 (406)
T ss_pred             C
T ss_conf             9


No 115
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.23  E-value=5.2e-08  Score=70.31  Aligned_cols=325  Identities=14%  Similarity=0.124  Sum_probs=164.8

Q ss_pred             CHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEE
Q ss_conf             9689999863210365--32898899999999999999968--899857999748734899987532057-89-707997
Q gi|254780153|r   24 RPGWSLGILEGALLGR--SHRCVLGKERINKAIQLTRKVLE--VPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~--sHRs~~f~~i~~~~~~~l~~l~~--~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~   97 (391)
                      +|+ |.+++++++=..  .|...-......+..+.|..++-  .+.+++++|+..|||.++|+++.-.-. .+ ..++..
T Consensus        81 ~p~-i~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAvE~AiKlAR~~tgr~~Iis~  159 (464)
T PRK06938         81 HPV-VIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFGSLPEAFAKEAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSF  159 (464)
T ss_pred             CHH-HHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             599-9999999986089812678586899999999999620555304408984798089999999998646798859998


Q ss_pred             ECCHHHHHHHHHHHCCC-----------CCEEEEECC------CCCCC------CHHHCC----C----CCCEEEEEEEC
Q ss_conf             07368888876532387-----------630674057------77657------867678----5----56579974202
Q gi|254780153|r   98 WESFGLGWMSDIRQLSL-----------QDVREFTAP------YGSLP------DFSKVD----F----DRDVVFVWNGT  146 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~-----------~~~~~~~~~------~g~~~------~~~~~~----~----~~~v~~~h~ET  146 (391)
                      .++|=++......--+.           .++.....|      ++...      ..+.++    .    ...++.+-.|+
T Consensus       160 ~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~p~p~~~r~p~~~~~~~~~~~~~~~le~~i~~~~~g~~~iAAvi~Ep  239 (464)
T PRK06938        160 QGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVQLPAAVILEV  239 (464)
T ss_pred             ECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf             34788970655654178755556788899967816886446766776156788889999999740540688248999888


Q ss_pred             CCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf             420---22032------035025686148864011011025---4--55685--79997001200176651544567788
Q gi|254780153|r  147 TSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPAS  210 (391)
Q Consensus       147 stG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~a  210 (391)
                      ..|   +..+.      ...+|+++++|+|+|=|.+=.++-   +  +..++  |++  ..-|+|++-==++.++.+++.
T Consensus       240 Iqg~gGvi~~p~~yl~~lr~lc~~~giLlI~DEVqtGfGRTG~~fa~e~~gv~PDii--t~gKglgGg~Plsavi~~~~i  317 (464)
T PRK06938        240 VQGEGGVIPADDEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV--VLSKAIGGSLPLAVVVYREWL  317 (464)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCEE--EECHHCCCCCCEEEEEECHHH
T ss_conf             568779864998999999999866791598642012677436840643236888879--863000487734999982776


Q ss_pred             HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             87654114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r  211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN  290 (391)
Q Consensus       211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~  290 (391)
                       +.   ..+                   ...++|+.--|+ ...+..++|+.+++++    ..++.+++.+.+.+.+.+.
T Consensus       318 -~~---~~~-------------------g~h~~T~~gnpl-a~AaalavL~iie~e~----l~~~a~~~G~~l~~~L~~l  369 (464)
T PRK06938        318 -DT---WQP-------------------GAHAGTFRGNQM-AMAAGSATLRYIKEHR----LAEHAAAMGERLLEHLRQL  369 (464)
T ss_pred             -HH---CCC-------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHH
T ss_conf             -50---478-------------------874872899989-9999999999998644----9999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCEEE-EEECCCCCCC-C--CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf             9716766882003653178-9824731011-3--7345678889999988862828726655676750568615888999
Q gi|254780153|r  291 DWIENLAVDETTRSNTSIC-MKIVDSDIAS-L--DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKE  366 (391)
Q Consensus       291 ~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~-~--~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~  366 (391)
                      ..-.+.+.  +.|...... +.+.++.... .  ...........+...+.++|+++...+.  -++.+|+.--=.++.+
T Consensus       370 ~~~~p~V~--dVRG~GLm~giElv~~~~~~d~~~~~p~~~~~~~~v~~~~l~~Gll~~~~g~--~g~virl~PPL~it~e  445 (464)
T PRK06938        370 QRDYPQLG--DVRGRGLMLGVEIVDPQGEPDALGHPPANGELASRIQRECLRRGLILELGGR--HGSVVRFLPPLIITAE  445 (464)
T ss_pred             HHCCCCEE--EEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHH
T ss_conf             85399879--7641606999998416666443335655589999999999978928964688--9998999799128899


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999
Q gi|254780153|r  367 DLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       367 dv~~L~~aLe~~~~~~k  383 (391)
                      +++.+++.|+.++.++-
T Consensus       446 eid~~~~~l~~al~~a~  462 (464)
T PRK06938        446 QIDEVAEIFAEAVYAAV  462 (464)
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             99999999999999985


No 116
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.22  E-value=6.9e-08  Score=69.51  Aligned_cols=324  Identities=14%  Similarity=0.071  Sum_probs=176.0

Q ss_pred             CCCCCCCCCCCC-CCHHHHHHHHHHHCCCC-CCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             998886888776-89689999863210365-32898--899999999999999968899857999748734899987532
Q gi|254780153|r   11 PKRPFFSSGPCA-KRPGWSLGILEGALLGR-SHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        11 p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~-sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n   86 (391)
                      ++-..|+-|=-. -.|..|++++.+.+-.- .|=++  -..++-+.+.+.+++-++..-+.+=++++.|++.++..++..
T Consensus        24 ~dvi~l~vgdpDf~~p~~i~~a~~~~~~~g~~~Y~~~~G~~~lreaia~~~~~~~g~~v~~d~I~it~G~~~al~~~~~~  103 (382)
T PRK06108         24 EDVLPFWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGATTPPERIAVTSSGVQALMLAAQA  103 (382)
T ss_pred             CCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHH
T ss_conf             99178889898999889999999999847998379998869999999999999878898668499807899999999999


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE---CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--
Q ss_conf             05789707997073688888765323876306740---57776578676785-----565799742024202203203--
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT---APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--  156 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--  156 (391)
                      ++++||.+++.+=.|..- ...+...+ ..+..+.   ...+...++++++.     .+.+.++.=..-||...+..+  
T Consensus       104 ~~~pGD~Vlv~~P~Y~~~-~~~~~~~g-~~~~~vpl~~~~~~~~~d~~~le~~~~~~~k~iil~~P~NPtG~v~s~e~l~  181 (382)
T PRK06108        104 LVGPGDEVVAVTPAWPNL-VAAPKILG-ARVVCVPLQYGGGGWQLDVDRLLAAITPRTRALFINSPNNPTGWTASRDDQQ  181 (382)
T ss_pred             HCCCCCEEEECCCCCCCH-HHHHHHCC-CEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHCCHHHHH
T ss_conf             669999899816878656-99999738-8278534566678866799999964575664999889969966204478899


Q ss_pred             ---EECCCCCCEEEEEECCHHH---HC---C--CC---CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCC
Q ss_conf             ---5025686148864011011---02---5--45---56857999700120017665--15445677888765411445
Q gi|254780153|r  157 ---FIPESREGLVICDATSAVF---AR---H--ID---FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPS  220 (391)
Q Consensus       157 ---~~~~~~~~llivD~vSs~g---~~---p--~d---~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~  220 (391)
                         .+|..++..+|.|-+=+-.   ..   |  ++   ..+--+.+.|.-|.++ -||  +|.++..++..++.....  
T Consensus       182 ~l~~la~~~~v~iisDEiY~~l~f~~~~~~ps~~~~~~~~~~~i~~~S~SK~f~-~~G~RiG~ii~~~~~~~~~~~~~--  258 (382)
T PRK06108        182 AILAHCRRHGLWIVADEVYERLYYGGGGRAPSFLDIAEPDDRIIFVNSFSKNWA-MTGWRLGWLVAPPSLGQDLEKLI--  258 (382)
T ss_pred             HHHHHHHCCCCEEECHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCHHCC-CCCCEEEEEEECHHHHHHHHHHH--
T ss_conf             999987626975353343333013899888346652366764999804303104-76761799997999999999999--


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE  300 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~  300 (391)
                                   ++        ...++|.+.-++...+++.-.  .=++.+.++.+++.+.+.+.+.+.+++....++-
T Consensus       259 -------------~~--------~~~~~~~~~q~aa~~al~~~~--~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~P~g  315 (382)
T PRK06108        259 -------------EY--------NTSCVPQFVQRAAVAALDEGE--DFVAQLVARLRRARDHLVDALRALPGVEVPKPDG  315 (382)
T ss_pred             -------------HH--------CCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCE
T ss_conf             -------------87--------037776899999999996862--6589999999999999999997379968737882


Q ss_pred             CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             0036531789824731011373456788899999-8886282872665-5676750-56861588899999999999999
Q gi|254780153|r  301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                          ..-+-+++++.  .  +   ..    .+.. .+.+.|+++--|. +...+.+ +|++..  .+.+.++.-++-|+.
T Consensus       316 ----~~y~w~~~~~~--~--~---~~----~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~a--~~~~~l~eal~RL~~  378 (382)
T PRK06108        316 ----AMYAFFRLDGA--T--D---SL----ALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFA--RDPARLDEGVERLRR  378 (382)
T ss_pred             ----EEEEEEECCCC--C--C---HH----HHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHH
T ss_conf             ----79998879999--9--9---99----999999996999998784118899997999962--999999999999999


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r  378 VF  379 (391)
Q Consensus       378 ~~  379 (391)
                      ++
T Consensus       379 ~l  380 (382)
T PRK06108        379 FL  380 (382)
T ss_pred             HH
T ss_conf             96


No 117
>PRK05794 consensus
Probab=99.22  E-value=6.4e-08  Score=69.73  Aligned_cols=319  Identities=12%  Similarity=0.012  Sum_probs=167.6

Q ss_pred             HHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             689999863210365328---988999999999999999688998-5799974873489998753205789707997073
Q gi|254780153|r   25 PGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES  100 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~  100 (391)
                      |..+++++.+.+-.-.|+   +.=..++-+.+.+.+++-++.+=+ -+|+ ++.|++.++..++.-++.+||.+++-.=.
T Consensus        45 p~~i~~a~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~g~~v~~~~I~-it~G~~~al~~~~~~l~~pGD~Vlv~~P~  123 (397)
T PRK05794         45 PENIKEAAIDAIEEGYTKYTPASGILELKQAICDKFKKDNGLNYEPSNII-VSNGAKQSLSNAFEAILNPGDEVIIPVPY  123 (397)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEE-ECCCHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf             89999999999855899898997729999999999999858999800189-87885999999999966998989982687


Q ss_pred             HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEE
Q ss_conf             68888876532387630674-057776578676785-----565799742024202203203-----5025686148864
Q gi|254780153|r  101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICD  169 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD  169 (391)
                      |..- ...+...++..+.+. ....+..+++++++.     .+.+.++.=..-||...+..+     .+|.+++.++|.|
T Consensus       124 Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~iil~~P~NPtG~v~s~~~l~~l~~la~~~~i~visD  202 (397)
T PRK05794        124 WVSY-PELVKLADGVPVFVDTKEENDFKYTIEELENAITSKTKAIIINSPNNPTGTVYSKEELEEIAKFAKEHDLFIISD  202 (397)
T ss_pred             CCCH-HHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECH
T ss_conf             6434-999997188029965673237777999999753335718997899898782435067999997654103688433


Q ss_pred             ECCHH---HHC-CCC-------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             01101---102-545-------56857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r  170 ATSAV---FAR-HID-------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       170 ~vSs~---g~~-p~d-------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      -+=+-   ... +..       ..+--+++.|.-|.++ .||  +|.++..++.+++....+                  
T Consensus       203 EiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~~~~~~------------------  263 (397)
T PRK05794        203 EIYEKLIYGEEEHISIASLSEDAFKRTVVINGMSKAYA-MTGWRIGYAASSLEIIKVMSNIQ------------------  263 (397)
T ss_pred             HHHHHHHCCCCCCCCHHHHCHHHHCCCEECCCCCCCCC-CCCCEEEEEECCHHHHHHHHHHH------------------
T ss_conf             34577625898887889956143203320267644447-76522587755899999999999------------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                           ..+...++...-++...+++.-  +.-++.+.+..+++...+.+.+.+..++....++-.    .-+-+.+++..
T Consensus       264 -----~~~~~~~~~~~q~a~~~al~~~--~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~P~g~----~y~~~~~~~~~  332 (397)
T PRK05794        264 -----SHTTSNPNSIAQYASLEALNGD--QEQIKNMVEEFKKRRDYMVERINSIKGLSCIKPKGA----FYVMVNISKVI  332 (397)
T ss_pred             -----HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEE----EEEEEECHHHH
T ss_conf             -----8666897699999999998587--999999999999999999999860799676068813----69958783442


Q ss_pred             C---CCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             0---11373456788899999-88862828726655676750568615888999999999999999999
Q gi|254780153|r  317 I---ASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       317 ~---~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .   .........    ++.. .+.+.|+++--|..=....-+|++..  .+.+.++.-++-|+.++.+
T Consensus       333 ~~~~~~~~~~~~~----~f~~~ll~~~gV~v~PG~~Fg~~~~vRl~f~--~~~e~l~eal~RL~~~l~~  395 (397)
T PRK05794        333 GKEIKGNTIKGSI----DFANLLLEEENVAVVPGIAFGMDNYIRLSYA--TSMENIEKGLDRIENFLNK  395 (397)
T ss_pred             CCCCCCCCCCCHH----HHHHHHHHHCCEEEEECCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf             5334688778999----9999999849999981853589983999982--9999999999999999985


No 118
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.22  E-value=1.3e-07  Score=67.72  Aligned_cols=306  Identities=12%  Similarity=0.080  Sum_probs=163.2

Q ss_pred             HHHHHHHHHHHCCC-CCCCCH---HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             68999986321036-532898---8999999999999999688998-579997487348999875320578970799707
Q gi|254780153|r   25 PGWSLGILEGALLG-RSHRCV---LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE   99 (391)
Q Consensus        25 p~~v~~~~~~~~l~-~sHRs~---~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g   99 (391)
                      |..+++++.+.+-. ..|+=+   -..++-+.+.+.+++-++.+-+ ...++.+.|++.++..++..++++||.+++..=
T Consensus        44 p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~~~p~~~vi~t~Ga~~al~~~~~~l~~pGD~Vli~~P  123 (383)
T TIGR03540        44 PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDP  123 (383)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCC
T ss_conf             99999999999828887654998784999999999999986898996766998478259999999996689898998789


Q ss_pred             CHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEE
Q ss_conf             368888876532387630674--057776578676785-----565799742024202203203-----50256861488
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVI  167 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~lli  167 (391)
                      .|..- ...+...+ ..+..+  ....+..+++++++.     .+.+.++.=..-||...+..+     .+|..++.++|
T Consensus       124 ~Y~~y-~~~~~~~g-~~~v~vpl~~~~~~~~d~e~l~~~~~~~~k~iil~~P~NPTG~v~s~~~l~~i~~la~~~~i~iI  201 (383)
T TIGR03540       124 GYPVY-RIGTLFAG-GEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVC  201 (383)
T ss_pred             CCCCH-HHHHHHCC-CEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEE
T ss_conf             86016-99999719-85899613357798579999987452377499989998970701210222201001245540576


Q ss_pred             EEECCHH---HH-CCC-----C-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             6401101---10-254-----5-56857999700120017665--15445677888765411445778312320011232
Q gi|254780153|r  168 CDATSAV---FA-RHI-----D-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       168 vD~vSs~---g~-~p~-----d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      .|-+=+-   .+ .+.     + .....+.+.|.-|.++ .||  +|.++..++.+++....+.                
T Consensus       202 sDEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~i~~~~l~~~~~~~~~----------------  264 (383)
T TIGR03540       202 HDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYN-MTGWRIGMAVGNADLIAGLGKVKT----------------  264 (383)
T ss_pred             CCHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCCCC-CCCCEEEEECCCHHHHHHHHHHHH----------------
T ss_conf             110255530389999771113665542577630235447-887348962289999999999975----------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS  315 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~  315 (391)
                            .....+| ...-++...+++.-.  .-++.+.+.++++.+.+.+.+.+.+ +....  |+  +..-+-+.+++.
T Consensus       265 ------~~~~~~~-~~~q~a~~~al~~~~--~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~~--p~--g~~~~w~~~~~~  330 (383)
T TIGR03540       265 ------NVDSGVF-QAIQYAAIAALNGPQ--DVVKEIRKIYQRRRDLLLEALKKIG-IDVEK--PK--ATFYVWVPVPEG  330 (383)
T ss_pred             ------HHCCCCC-HHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEEEC--CC--CEEEEEEECCCC
T ss_conf             ------5135676-599999999985919--9999999999999999999998769-87735--78--057998989999


Q ss_pred             CCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             10113734567888999998-886282872665-5676750-5686158889999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                          .+       ..++... +.+.|+++--|. +...+.+ ||++..  .+.+.++.-++-|+
T Consensus       331 ----~~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~~--~~~e~l~eal~RL~  381 (383)
T TIGR03540       331 ----YT-------SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIK  381 (383)
T ss_pred             ----CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHH
T ss_conf             ----89-------89999999983999998885328899886999986--99999999999984


No 119
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.21  E-value=1.9e-08  Score=73.14  Aligned_cols=281  Identities=14%  Similarity=0.125  Sum_probs=160.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++.   |..+=+..   .++ +.+||-+|+.+ ++.++++|+.+++...-|+.  +.++......+..+...
T Consensus        48 ~nPt~~~lE~~---la~LEg~~---~a~-~~sSGmAAi~a-~la~~~~Gd~iv~~~~~Yg~t~~~~~~~l~~~GI~~~~v  119 (379)
T PRK06176         48 GNPTRFALEEL---IADLEGGV---KGF-AFASGLAGIHA-VFSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTII  119 (379)
T ss_pred             CCHHHHHHHHH---HHHHHCCC---CEE-ECCCHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             88549999999---99982986---533-12557999999-999868999899818988877674598764478499986


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +.     .+.++++.  .+...+++.||.+--.+....     .+++++++++|||-+  +-+...|++. +.|+++-|.
T Consensus       120 d~-----~d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~gi~~vvDNT~atP~~~~Pl~~-GaDiVihS~  193 (379)
T PRK06176        120 DT-----SDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLL-GADIVVHSG  193 (379)
T ss_pred             CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf             78-----676889965687745999977999876015858999999976987997367215133262341-898899954


Q ss_pred             HHCCCCCCCC--EEEEECHHHHH-HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             1200176651--54456778887-65411445778312320011232103347864466644889999999986201031
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVE-RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG  268 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG  268 (391)
                      -|-++|-+.+  |.|+.+++.+. +...            +   .+     ..|.   +++-+..|.+...|      ..
T Consensus       194 TKyi~GhsD~l~G~vv~~~~~~~~~~~~------------~---~~-----~~G~---~l~p~~a~ll~rGL------~T  244 (379)
T PRK06176        194 TKYLGGHSDVVAGLVTTNNEALAQEIAF------------F---QN-----AIGG---VLGPQDSWLLQRGI------KT  244 (379)
T ss_pred             CCCCCCCCCCCCEEEECCCHHHHHHHHH------------H---HH-----HCCC---CCCHHHHHHHHHCC------CC
T ss_conf             5011478774023883496899999999------------9---97-----5077---77846789997222------52


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             899999999779999999874797167-----6688200--------365317898247310113734567888999998
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQENDWIEN-----LAVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~~~~~~-----~~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      +.-|.+|+.+++..+-+|+++++....     +...|.+        .....++|.+.+..           ....+...
T Consensus       245 L~lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~~~la~~~~~g~gg~~sf~l~~~~-----------~a~~f~~~  313 (379)
T PRK06176        245 LGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDS-----------EAVAFVES  313 (379)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCHH-----------HHHHHHHH
T ss_conf             8999999999999999998719982679898999994399999767899985478856899-----------99999981


Q ss_pred             HHHCCEEECCCCCCCC----------------------CCE-EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676----------------------750-568615888999999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA----------------------PLG-LRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~----------------------~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      |.--..+..+|+.++.                      +.+ +|+++|    .||++.|++-|+.||++
T Consensus       314 l~lf~~a~slGg~eSLi~~P~~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~~DLi~Dl~~AL~~  378 (379)
T PRK06176        314 LKLFILGESLGGVESLVGVPAFMTHACIPKEQREAAGIRDGLVRLSVG----IEHEQDLLEDLEQAFAK  378 (379)
T ss_pred             CCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHC
T ss_conf             882546216688760424763225544899999866989394999951----19999999999999833


No 120
>PRK07550 hypothetical protein; Provisional
Probab=99.21  E-value=1.5e-07  Score=67.47  Aligned_cols=319  Identities=16%  Similarity=0.044  Sum_probs=174.9

Q ss_pred             CCCCCCCCC-CCHHHHHHHHHHHCCCC-CCC---CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf             886888776-89689999863210365-328---9889999999999999996889985799974873489998753205
Q gi|254780153|r   14 PFFSSGPCA-KRPGWSLGILEGALLGR-SHR---CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL   88 (391)
Q Consensus        14 ~~F~pGP~~-~~p~~v~~~~~~~~l~~-sHR---s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~   88 (391)
                      .|++-|=-. -+|..+++++...+..- .|+   +.=..++-+.+.+.+++.++.+-+-+=++++.|++.++..++.-|+
T Consensus        33 I~L~~G~Pdf~~p~~i~~a~~~a~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~pe~I~it~G~~~al~~~~~al~  112 (387)
T PRK07550         33 IDLSQAVPVYPPPPELRRALAEAAGDPAAHLYGPVEGLPELREAYAAQYSRLYGAAINPGQVAITSGCNQAFWAAMVTLA  112 (387)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHC
T ss_conf             58989889898789999999999669888889898571999999999999986889967988987678999999999971


Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----
Q ss_conf             78970799707368888876532387630674--057776578676785-----565799742024202203203-----
Q gi|254780153|r   89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----  156 (391)
Q Consensus        89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----  156 (391)
                      .+||.+++..=.|.... ..+...+ .....+  ....+..+++++++.     .+.+.++.=..-||...+..+     
T Consensus       113 ~pGD~Vli~~P~Y~~y~-~~~~~~G-~~~~~vp~~~~~~~~~d~~~le~~~~~~tk~iil~~P~NPtG~v~s~e~l~~l~  190 (387)
T PRK07550        113 GAGDEVILPTPWYFNHK-MWLDMLG-IRAVLVPLDTGPGLLPDPEAAAALITPRTRAIVLVTPNNPTGVVYPPELLHELY  190 (387)
T ss_pred             CCCCEEEEECCCCCCHH-HHHHHCC-CEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf             89898998279675379-9999769-989734777567987799999975565783770389969988510779853465


Q ss_pred             EECCCCCCEEEEEECCH-HHH---CCC------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf             50256861488640110-110---254------556857999700120017665--154456778887654114457783
Q gi|254780153|r  157 FIPESREGLVICDATSA-VFA---RHI------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLP  224 (391)
Q Consensus       157 ~~~~~~~~llivD~vSs-~g~---~p~------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~  224 (391)
                      .+|..++..+|.|-+=+ +..   .|.      ++.+--+.+.|.-|.++ -||  +|.++.+++.+++..+...     
T Consensus       191 ~la~~~~~~iI~DEiY~~~~~~~~~~~~~~~~~~~~~~vI~i~S~SK~~~-~~G~RiG~i~~~~~~i~~~~~~~~-----  264 (387)
T PRK07550        191 DLARRRGLALILDETYRDFDSRGGAPHDLFADPDWGDTLVHLYSFSKAYR-LTGHRVGALAASPARLAEIEKFLD-----  264 (387)
T ss_pred             HHCCCEEEEEEECCCHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCCCCC-CCCCEEEEEEECHHHHHHHHHHHH-----
T ss_conf             43033158999417578753388777667653366755999746764456-754217999839999999999997-----


Q ss_pred             CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             12320011232103347864466644889999999986201031899999999779999999874797167668820036
Q gi|254780153|r  225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS  304 (391)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS  304 (391)
                                        .+..+++...-++...+|+....  -++...+...++.+.+.+.+.+.+++...   +.  +
T Consensus       265 ------------------~~~~~~~~~~q~aa~~al~~~~~--~~~~~~~~~~~rr~~l~~~l~~~~~~~~~---~~--G  319 (387)
T PRK07550        265 ------------------TMAICAPRIGQIAVLWGIRNLAD--WVAGNRAEILRRRDALRAGFSRLPGWELL---AS--G  319 (387)
T ss_pred             ------------------HHCCCCCHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEC---CC--C
T ss_conf             ------------------60367877999999999863099--99999999999999999988646896547---88--3


Q ss_pred             CCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             531789824731011373456788899999-8886282872665-567675-05686158889999999999999
Q gi|254780153|r  305 NTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      ..-+-+..+.+...          ...+.. ++.+.|+++--|. +...+. -+|++.. ..++++++.-++-|+
T Consensus       320 ~~f~w~~~~~~~~~----------~~~~~~~ll~e~gV~v~PG~~Fg~~g~~~vRlsfa-~~~~~~i~ea~~RL~  383 (387)
T PRK07550        320 AYFAYVRHPFPDAS----------SDEVARRLAKEAGILCLPGTMFGPGGERYLRLAFA-NIDVAGIAELVERLR  383 (387)
T ss_pred             EEEEEEECCCCCCC----------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC-CCCHHHHHHHHHHHH
T ss_conf             47998837889989----------99999999986999997875338899897999946-799999999999998


No 121
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.21  E-value=2.6e-08  Score=72.23  Aligned_cols=308  Identities=15%  Similarity=0.108  Sum_probs=163.2

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-------CCCCC-EE
Q ss_conf             968999986321036532898899-9999999999999688998579997487348999875320-------57897-07
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-------LGYRG-VD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-------~~~~~-~~   94 (391)
                      +|+ |.+++.+++-...|.+.-|. +...+.-+.|.++.+.  + +|+ +..||+.++|+++.=.       -.++. .+
T Consensus        57 ~p~-i~~Ai~~Q~~~l~h~~~~~~~~~~~~lae~L~~~~~~--~-~v~-f~~sGseAvE~AiKlAr~y~~~~~~~~r~~i  131 (398)
T PRK02627         57 HPK-LVEAIQEQAAKLIHTSNLYYIPPQEELAEKLVELSGM--D-KVF-FCNSGAEANEAAIKLARKYGHTKGGIEKPEI  131 (398)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--C-EEE-EECCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             899-9999999998567866654670899999999752499--8-799-8287799999999999999886478888679


Q ss_pred             EEEECCHHHHHHHHHHHCCCCC---------EEEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------EE
Q ss_conf             9970736888887653238763---------067405777657867678556579974202420---22032------03
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLSLQD---------VREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------VG  156 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------~~  156 (391)
                      +...++|=++.......-+...         ......|++....++..-....++.+-.|...|   +..|.      ..
T Consensus       132 i~~~~syHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~~iAAvi~EPiqg~gG~~~~~~~yl~~lr  211 (398)
T PRK02627        132 ITAENSFHGRTLATLSATGQPKYQKGFEPLVPGFIYVPFNDIEALEAAINNPRTAAVLLEPIQGEGGVNPADKEYLQALR  211 (398)
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf             99537869997510013788222367678888805624772999999845898799998278888898658888999999


Q ss_pred             EECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             5025686148864011011025---4--5568579997001200176651544567788876541144577831232001
Q gi|254780153|r  157 FIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       157 ~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      .+|+++++++|+|=|.+=.++-   +  +.+++.-.+...-|+|++===++.++.+++..+..   .+            
T Consensus       212 ~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~Plsav~~~~~i~~~~---~~------------  276 (398)
T PRK02627        212 ELCDENNILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLGGGVPIGAVLAKGKAADVF---TP------------  276 (398)
T ss_pred             HHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCEECCHHHHHHC---CC------------
T ss_conf             998650740775300017785565104332697888577600024889871243169999636---79------------


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE-EE
Q ss_conf             12321033478644666448899999999862010318999999997799999998747971676688200365317-89
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI-CM  310 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v-~~  310 (391)
                             ...++|+.--|+ ...+...+|+.+++++ +   .++.+++.+.+.+.+++.---.+.+.  +.|..... .+
T Consensus       277 -------g~h~~T~~gnpl-a~aaa~a~L~~i~~~~-l---~~~~~~~g~~l~~~L~~l~~~~~~v~--~vRG~Gl~~gi  342 (398)
T PRK02627        277 -------GDHGSTFGGNPL-ACAAALAVLDIIEEEG-L---LENAAERGEYLRAGLRELLEKYPIIK--EVRGLGLMIGI  342 (398)
T ss_pred             -------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHHHHCCCEE--EEEECCEEEEE
T ss_conf             -------987888999989-9999999999998648-9---99999999999999999997199836--77322579999


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      .+..+             ...+...+.++|+++...+    +..+|+.--=.++.++++.+++.|+.++.++
T Consensus       343 el~~~-------------~~~~~~~~~~~Gll~~~~g----~~~ir~~PPL~it~~eid~~~~~l~~al~ev  397 (398)
T PRK02627        343 ELKRP-------------AKELVKKALEKGLLINVTG----DNVLRLLPPLIISKEEIDELVDRLDEVLKEL  397 (398)
T ss_pred             EECCC-------------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             96787-------------9999999997897895079----9989998892089999999999999999986


No 122
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of  the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.21  E-value=1.6e-07  Score=67.25  Aligned_cols=287  Identities=16%  Similarity=0.087  Sum_probs=161.1

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CCC
Q ss_conf             9999999999999996889985799974873489998753205789707997073688888765323876306740-577
Q gi|254780153|r   46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-APY  124 (391)
Q Consensus        46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~  124 (391)
                      ..++-+.+.+.++..++.+-+.+-++++.|++.++..++..+.++|+.+++..=.|..- ...+...+ ..+..+. .+.
T Consensus        38 ~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~-~~~~~~~g-~~~~~v~~~~~  115 (350)
T cd00609          38 LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGY-EAAARLAG-AEVVPVPLDEE  115 (350)
T ss_pred             CHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHH-HHHHHHCC-CCCCCCCCCCC
T ss_conf             19999999999878738997479789926999999999999808989899947986306-99999829-94125565600


Q ss_pred             C-CCCCHHHC-----CCCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHH---HCCC------CCCCC
Q ss_conf             7-65786767-----85565799742024202203203-----5025686148864011011---0254------55685
Q gi|254780153|r  125 G-SLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVF---ARHI------DFNKL  184 (391)
Q Consensus       125 g-~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g---~~p~------d~~~i  184 (391)
                      + ...+.+..     +..+.+.++.-..-||...+..+     .+|..++.++|+|-+=.-.   ..+.      +...-
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~  195 (350)
T cd00609         116 GGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYER  195 (350)
T ss_pred             CCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHCCCCCE
T ss_conf             38676689999856889978985699497254633788989999986238626885341220369988896785577980


Q ss_pred             EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             7999700120017665--15445677888765411445778312320011232103347864466644889999999986
Q gi|254780153|r  185 DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLW  262 (391)
Q Consensus       185 Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~  262 (391)
                      -+++.|.-|.++ -||  +|.++.+++.+.+.....                      ...+...++....+++...++.
T Consensus       196 ~i~~~S~SK~~~-l~GlRiG~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~q~~~~~~l~~  252 (350)
T cd00609         196 VIVLRSFSKTFG-LPGLRIGYLIAPPEELLERLKKL----------------------LPYTTSGPSTLSQAAAAAALDD  252 (350)
T ss_pred             EEEEECCCCCCC-CCCCCEEEEEECHHHHHHHHHHH----------------------CCCCCCCCCHHHHHHHHHHHHC
T ss_conf             899911723037-94537799998889999999862----------------------4214678987999999999868


Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
Q ss_conf             20103189999999977999999987479716766882003653178982473101137345678889999988862828
Q gi|254780153|r  263 LKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIA  342 (391)
Q Consensus       263 i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~  342 (391)
                      -.  .-++...++.+++.+.+.+.+.+.+......  ++  +..-+.+.+++..        .   ...+...+.++|++
T Consensus       253 ~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--p~--~g~f~~~~~~~~~--------~---~~~~~~~l~~~gv~  315 (350)
T cd00609         253 GE--EHLEELRERYRRRRDALLEALKELGPLVVVK--PS--GGFFLWLDLPEGD--------D---EEFLERLLLEAGVV  315 (350)
T ss_pred             CH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC--CC--CCEEEEEECCCCC--------H---HHHHHHHHHHCCEE
T ss_conf             29--9999999999999999999998579961207--99--5539989899998--------2---99999999979999


Q ss_pred             ECCCCCC--CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             7266556--767505686158889999999999999
Q gi|254780153|r  343 YDIGSYR--DAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       343 ~~~~~~r--~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      +..++.-  .....+||+....  .++++..++.|.
T Consensus       316 v~~g~~f~~~~~~~iRl~~~~~--~~~~~~~~~rl~  349 (350)
T cd00609         316 VRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA  349 (350)
T ss_pred             EEECHHHCCCCCCEEEEEECCC--HHHHHHHHHHHC
T ss_conf             9924564889989799996398--999999999857


No 123
>PRK07908 hypothetical protein; Provisional
Probab=99.21  E-value=9.2e-08  Score=68.73  Aligned_cols=312  Identities=17%  Similarity=0.131  Sum_probs=168.1

Q ss_pred             CCCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             68998886888776-89689999863210365328988999999999999999688998579997487348999875320
Q gi|254780153|r    9 RKPKRPFFSSGPCA-KRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL   87 (391)
Q Consensus         9 ~~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl   87 (391)
                      ..|.-..||.|=-+ -+|..+++++...+-+ .||=|+ .+-..+.++.+.+.++++.+ +|++..| ++.++..... +
T Consensus        19 ~~pgiidlS~n~np~gpp~~v~~al~~a~~~-~~~YP~-~~~~~~Lr~aiA~~~gv~~d-~I~~gnG-s~E~i~~l~~-~   93 (346)
T PRK07908         19 AAPGLLDFAVNVRADRPPEWLRERLAARLPD-LARYPS-TEDVRRARAAVAARHGRTRD-EVLLLAG-AAEGFALLAR-L   93 (346)
T ss_pred             CCCCCEECCCCCCCCCCCHHHHHHHHHHCCC-CCCCCC-CCCHHHHHHHHHHHHCCCHH-HEEEECC-HHHHHHHHHH-H
T ss_conf             8999778889999989799999999975554-668939-86569999999999785889-9987437-9999999999-7


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEE-EEEEECCCCEEECCEEE--ECCCCCC
Q ss_conf             57897079970736888887653238763067405777657867678556579-97420242022032035--0256861
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVV-FVWNGTTSGVCVPDVGF--IPESREG  164 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~-~~h~ETstGv~~~~~~~--~~~~~~~  164 (391)
                       .+++.+++ .=.|+..  ..+.+..+..+..+........+.+.++....+. ++.=..-||...+..++  ++ ..+.
T Consensus        94 -~~~~~vi~-~P~f~~y--~~~~~~~g~~v~~v~l~~~~~ld~~ai~~~~~lv~l~nPnNPTG~~~~~e~l~~l~-~~~~  168 (346)
T PRK07908         94 -LPRRAAVV-HPSFTEP--EAALRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVVGNPTNPTSVLHPAEQLLALR-RPGR  168 (346)
T ss_pred             -CCCCEEEE-CCCCHHH--HHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHH-CCCC
T ss_conf             -48996997-8885799--99999869925995079866689657676789899799979877867899999985-3498


Q ss_pred             EEEEEECC-HHH-HCC--CCCCCC-E-EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             48864011-011-025--455685-7-9997001200176651--54456778887654114457783123200112321
Q gi|254780153|r  165 LVICDATS-AVF-ARH--IDFNKL-D-VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       165 llivD~vS-s~g-~~p--~d~~~i-D-v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      ++|+|-.= .|. +.+  +-.... + +++-|--|.++ -||+  |+++.+++.+++....+..+.              
T Consensus       169 ~lVvDEaY~df~~~~~~s~~~~~~~nvivlrSfSK~yg-laGlRiGy~va~~~~i~~l~~~~~~~~--------------  233 (346)
T PRK07908        169 ILVVDEAFADAVPGEPESLAGDALPDLLVLRSLTKTWS-LAGLRVGYALGAPELLARLTAQRAHWP--------------  233 (346)
T ss_pred             EEEEEHHHHHCCCCCCHHHHHHCCCCEEEEECHHHHHC-CCHHHHEEEECCHHHHHHHHHHCCCCC--------------
T ss_conf             99995115432589713444424898899924357625-772551321169999999998277888--------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCC
Q ss_conf             03347864466644889999999986201031899999999779999999874797167668820036531789-82473
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDS  315 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~  315 (391)
                              .++++   +.+....+. -....-.....++..+..+.+++.+.+.++....      -|.++..+ ++++ 
T Consensus       234 --------v~~~a---~~a~~a~~~-~~~~~~~~~~~~~~~~~R~~l~~~L~~~g~~~~~------ps~anF~l~~~~~-  294 (346)
T PRK07908        234 --------LGTLQ---LEAIAACCA-PRAVAEAAADAERLAALRAEMVAGLRAVGAEVVD------PGAAPFVLVRVPD-  294 (346)
T ss_pred             --------CCHHH---HHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC------CCCEEEEEEECCC-
T ss_conf             --------87999---999999958-7568999999999999999999999977886538------9950899986899-


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCEEECCC-CCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             1011373456788899999888628287266-5567675-056861588899999999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIG-SYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                                   ...+...|.++|+++.-+ .+...++ -+||+.+   ++++.++|+++|+..++
T Consensus       295 -------------a~~~~~~L~~~gIlVr~~~~f~gl~~~~iRiav~---~~een~rli~aL~~il~  345 (346)
T PRK07908        295 -------------AELVRKRLRERGIAVRRGDTFPGLDPDYLRAAVR---PEWPVDRLVQAIAEILR  345 (346)
T ss_pred             -------------HHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHC
T ss_conf             -------------9999999980895999788778879898999838---89999999999999974


No 124
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.21  E-value=4.8e-08  Score=70.52  Aligned_cols=284  Identities=17%  Similarity=0.162  Sum_probs=161.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+-+..    -.++.+||-+|..+++++++++|+.+++....||.-  ..+.+.+.+ .+++..
T Consensus        51 gnPT~~~le~~l---a~LEg~~----~a~~~sSGmaAi~~~ll~~l~~Gd~il~~~~~Yg~t~~l~~~l~~~G-i~v~~~  122 (384)
T PRK08574         51 ENPTVRPLEEKL---AKLEGGV----DALAFNSGMAAISTLFFSLLKAGDEVVLPMEAYGTTLRLLKSLEKFG-VRVRLA  122 (384)
T ss_pred             CCHHHHHHHHHH---HHHHCCC----EEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHC-CEEEEE
T ss_conf             886599999999---9981997----18995587999999999816899989984897145999999998608-579994


Q ss_pred             ECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCE-----EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCHH
Q ss_conf             05777657867678556579974202420220320-----3502568614886401--1011025455685799970012
Q gi|254780153|r  121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDV-----GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQK  193 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~-----~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQK  193 (391)
                      ...   ..+..+.-.....-+++.||.+--...+.     ..+++.+++++|||-+  |-+...|++ .++|+++-|.-|
T Consensus       123 ~~~---~~~~~~~~~~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vvDNT~atP~~~~Pl~-~GaDivvhS~TK  198 (384)
T PRK08574        123 YPS---TEDLIEAIKESRTKLVFIETITNPTLRVIDVPEVAKAAKDLGAILVVDNTFATPILYRPLE-HGADFVVHSLTK  198 (384)
T ss_pred             CCC---CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHH-HCCCEEEEECCC
T ss_conf             899---7899997447885499998899987634785999999977598599737751264268066-489889995462


Q ss_pred             CCCCCCCC--EEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             00176651--544567788-876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r  194 VLGGEAGF--GIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS  270 (391)
Q Consensus       194 ~l~~ppGl--~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~  270 (391)
                      -++|-..+  |.++.+.+. .++..            .+..        ..|.   +++-+..|.+...|      ..+.
T Consensus       199 yi~GHsdv~~G~vv~~~~~~~~~l~------------~~~~--------~~G~---~lsp~~a~l~~rgl------~TL~  249 (384)
T PRK08574        199 YIAGHNDVLGGVAVVWNGEFLEELW------------VWRR--------RLGT---IMQPFEAWLVLRGL------KTLE  249 (384)
T ss_pred             EECCCCCCEEEEEEECCHHHHHHHH------------HHHH--------HHCC---CCCCHHHHHHHCCC------CCHH
T ss_conf             1038867341389835178899999------------9999--------8289---88923478886065------8799


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC-------C--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             99999997799999998747971676-----688200-------3--653178982473101137345678889999988
Q gi|254780153|r  271 ACVERCNANAAVLFQFIQENDWIENL-----AVDETT-------R--SNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       271 ~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~-------r--S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      -|.+|+.+++..+-+|+++++.....     ...|.+       .  .-..++|.+....          .....+...|
T Consensus       250 lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~shp~~~~a~~~~~g~~G~~~sf~l~~~~----------~~~~~f~~~L  319 (384)
T PRK08574        250 VRFERQCENAMAIAEFLSEHPKVREVHYPGLPSDPYHEVAKRLFGDLYGGVVSFRVKGGR----------DAVLKFLRSL  319 (384)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCH----------HHHHHHHHHC
T ss_conf             999999999999999997099988898988899947899998679997649999972999----------9999999828


Q ss_pred             HHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             862828726655676----------------------75-0568615888999999999999999999
Q gi|254780153|r  337 EKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       337 ~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .--.....+|+..+.                      .. -+|+++|=    ||++.|++-|+.||..
T Consensus       320 ~lf~~~~SlGg~eSLi~~P~~~sh~~~~~e~r~~~Gi~~~liRlSvGl----Ed~~DLi~DL~~AL~~  383 (384)
T PRK08574        320 KLIFPSPSLGGVESIATYPVASAASPIPEEDRKILGITEDLVRLSVGL----EDVEDLIEDLDQALNS  383 (384)
T ss_pred             CCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf             857343164754222247310367559999999729893949999410----9999999999999834


No 125
>PRK06575 consensus
Probab=99.21  E-value=8.4e-08  Score=68.97  Aligned_cols=321  Identities=9%  Similarity=-0.019  Sum_probs=163.0

Q ss_pred             HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             689999863210----365328988999999999999999688998-579997487348999875320578970799707
Q gi|254780153|r   25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE   99 (391)
Q Consensus        25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g   99 (391)
                      |..|++++.+.+    .++++ +.-..++-+.+.+.+++-++.+=+ -+|++ +.|++.++..+++.++++||.+++-+=
T Consensus        46 p~~i~~a~~~a~~~g~~~Y~~-~~G~~~Lr~aia~~~~~~~~~~~~~d~i~v-t~G~~~al~~~~~~l~~pGD~Vli~~P  123 (399)
T PRK06575         46 PDNIKEAAIKAIKDGFTKYTN-VEGMPLLKQAIKDKFKRENNIDYELDEIIV-STGGKQVIYNLFMASLDKGDEVIIPAP  123 (399)
T ss_pred             CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEEE-ECCCCHHHHHHHHHHCCCCCEEEECCC
T ss_conf             999999999998559998899-878399999999999998589998431999-489528999999986589998997478


Q ss_pred             CHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCC-CCEEE
Q ss_conf             368888876532387630674-057776578676785-----5657997420242022032035-----02568-61488
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESR-EGLVI  167 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~-~~lli  167 (391)
                      .|..- ...+...++..+... ..+.+..+++++++.     .+.+.++.=..-||...+..+.     +|.++ +..+|
T Consensus       124 ~y~~y-~~~~~~~~~~~v~~~~~~e~~~~~d~e~l~~~~~~~~k~iil~nP~NPTG~v~~~eel~~i~~~~~k~~~v~ii  202 (399)
T PRK06575        124 YWVSY-PDMVALSTGTPVFVNCGIENNFKLSAEALERSITDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYPHVNVM  202 (399)
T ss_pred             CCCCH-HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             53235-89999828856994157554655589999864444767999899999988878899999999998745873784


Q ss_pred             EEECCHHHHC---C---C-----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             6401101102---5---4-----556857999700120017665--1544567788876541144577831232001123
Q gi|254780153|r  168 CDATSAVFAR---H---I-----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       168 vD~vSs~g~~---p---~-----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      .|-+-+-...   +   +     ++.+--+.+.|.-|.++ -||  +|.++.++..+++.....                
T Consensus       203 sDEiY~~~~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~~~~~~~~i~~~~~~~----------------  265 (399)
T PRK06575        203 SDDIYEHITFDDFKFYTLAQIAPDLKERIFTVNGVSKAYS-MTGWRIGYGAGSKALIKAMTIIQ----------------  265 (399)
T ss_pred             CHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCC-CCCCCEEEEECCHHHHHHHHHHH----------------
T ss_conf             2135666416898774113307654223257414210147-87723375308799999999999----------------


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                             .+....|+...-++...+|+....  =++....+++++.+.+.+.++..+++....++-.+.    +-+.++.
T Consensus       266 -------~~~~~~~~~~~q~aa~~al~~~~~--~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~P~G~~y----l~~~~~~  332 (399)
T PRK06575        266 -------SQSTSNPCSISQMAAIEALNGPQD--YIKPNALNFQKKRDLALSILKRVKYFECYKPEGAFY----LFVKCDK  332 (399)
T ss_pred             -------HCCCCCCCHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEE----EEEECCC
T ss_conf             -------615678668999999999858477--899999999999999999986479844617992379----9577730


Q ss_pred             CCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             310113734567888999998-886282872665-5676750568615888999999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      ................++... +.+.++++--|- +.. ..-||++..  .+.+.++.-++-|+.++..
T Consensus       333 ~~~~~~~~~~~~~~~~~f~~~Ll~e~~V~v~PG~~FG~-~g~~Rl~~a--~~~e~l~ea~~Rl~~a~~~  398 (399)
T PRK06575        333 IFGHKTKSGKIIANSNDFAEYLLEEAKVAVVPGIAFGL-EGYFRISYA--TSMEELEEACIRIERACNV  398 (399)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC-CCEEEEEEC--CCHHHHHHHHHHHHHHHHH
T ss_conf             01544434676789999999999729999984855589-983999973--9899999999999999974


No 126
>PRK04152 consensus
Probab=99.20  E-value=1.9e-07  Score=66.78  Aligned_cols=303  Identities=16%  Similarity=0.107  Sum_probs=171.8

Q ss_pred             CCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf             868887768-9689999863210365328988999999999999999688998579997487348999875320578970
Q gi|254780153|r   15 FFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV   93 (391)
Q Consensus        15 ~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~   93 (391)
                      .|+.+=.+. +|..+++++...+-. .||=|+-  -..+.++.+.+.++++.+ .|+ +..|++..+..++..++.+|+.
T Consensus        35 ~ls~NeNP~g~p~~~~~ai~~~~~~-~~~YPd~--~~~~Lr~~iA~~~gv~~~-~I~-vgnGs~e~i~~~~~~~~~~g~~  109 (364)
T PRK04152         35 KLASNENPFGTSPKVIEAIRKNASK-AHLYPDD--SMFELKSALASKFDVESE-NII-IGAGSDQVIEFAIHAKLNEKSS  109 (364)
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHH-CCCCCCC--CHHHHHHHHHHHHCCCHH-EEE-ECCCHHHHHHHHHHHHHCCCCE
T ss_conf             8179999999999999999987873-7679996--799999999998695830-099-8569999999999998389984


Q ss_pred             EEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH------CCCCCCEEEEEEECCCCEEECCEEE---EC-CCCC
Q ss_conf             799707368888876532387630674057776578676------7855657997420242022032035---02-5686
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK------VDFDRDVVFVWNGTTSGVCVPDVGF---IP-ESRE  163 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~v~~~h~ETstGv~~~~~~~---~~-~~~~  163 (391)
                      +++..-.|+..  ...++..+..+...  +..+ .++++      .+..+.+.+|+=..-||...+..++   +. ...+
T Consensus       110 vl~~~Ptf~~Y--~~~a~~~g~~v~~~--~~~~-~dl~~~~~~~~~~~~~lv~l~nPNNPTG~~~~~~~l~~~~~~~~~~  184 (364)
T PRK04152        110 VLMAGVTFAMY--EIYAKQCGAKIYKT--QSVE-HDLNEFLELYKSHKPKIIFLCLPNNPLGECLDASEVYKFIKGIDED  184 (364)
T ss_pred             EEECCCCHHHH--HHHHHHCCCEEEEC--CCCC-CCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf             46589872689--99999839879966--8743-3989999986377985899879999867246651249999754557


Q ss_pred             CEEEEEECC-HHHHCC-----CC----CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             148864011-011025-----45----56857--9997001200176651--5445677888765411445778312320
Q gi|254780153|r  164 GLVICDATS-AVFARH-----ID----FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       164 ~llivD~vS-s~g~~p-----~d----~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
                      .++|+|=.= .|...+     +.    ..+.+  ++.-+--|.+| -||+  |.++.+++.+++..+...          
T Consensus       185 ~~vvvDEAY~ef~~~~~~~~~~~~~~l~~~~~nlivlrsfSK~~g-laGlRlGy~ia~~~~i~~l~k~~~----------  253 (364)
T PRK04152        185 TLVVIDAAYMEFAKFKDSKKHIEPKELIKLFPNVIYLGTFSKAYG-LGGMRVGYGIANAEIISALYKLRP----------  253 (364)
T ss_pred             CEEEEEHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCHHHCC-CCCCCCCCCCCCHHHHHHHHHHCC----------
T ss_conf             768741677888603775345588998742797899832605237-877735201389999999998538----------


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf             01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC  309 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~  309 (391)
                                     ++.-+.....+...+|+.   +.-++...+...+..+.+.+.+... ++..+.      |.+|-.
T Consensus       254 ---------------p~~vn~~a~~aa~~aL~~---~~~~~~~~~~~~~er~~~~~~~~~~-g~~~~p------s~aNFi  308 (364)
T PRK04152        254 ---------------PFNVTTLSLKAAIEALKD---EEFVEKTLENNFKEMKRYEEFAKEQ-GIEFID------SYTNFI  308 (364)
T ss_pred             ---------------CCCCCHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC------CCCCEE
T ss_conf             ---------------988679999999999379---9999999999999999999998858-884899------988789


Q ss_pred             -EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             -982473101137345678889999988862828726-6556767505686158889999999999999999
Q gi|254780153|r  310 -MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       310 -~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                       +.++...           ....+.+.|.++|+++.- ..|..  ..+||+.+   ++++.++|+++|+.++
T Consensus       309 l~~~~~~~-----------~a~~l~~~L~~~gI~VR~~~~~g~--~~iRIsvg---~~een~~li~aL~~vL  364 (364)
T PRK04152        309 TFFFDERK-----------NSTEISQKLLKKGIIVRNLKSYGL--NAIRITIG---TPEQNDRVFEELDKEL  364 (364)
T ss_pred             EEECCCCC-----------CHHHHHHHHHHCCEEEEECCCCCC--CEEEEECC---CHHHHHHHHHHHHHHC
T ss_conf             89899999-----------999999999968919985798996--97999739---9999999999999759


No 127
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.20  E-value=8.8e-08  Score=68.87  Aligned_cols=318  Identities=12%  Similarity=0.015  Sum_probs=167.5

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-------CCCCCCEE
Q ss_conf             968999986321036532898-89-9999999999999968899857999748734899987532-------05789707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-------LLGYRGVD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-------l~~~~~~~   94 (391)
                      +|+ |.+++.+++=..+|-+. .| .+...+.-+.|.+++  |.+..-+++..||+.|+|+++.=       .-.++..+
T Consensus        60 ~p~-i~~Ai~~q~~~l~~~~~~~~~~~~~~~lA~~L~~~~--p~~~~~v~f~~SGsEA~e~AiKlA~~y~~~~g~~r~~i  136 (421)
T PRK05964         60 HPH-IDAAIREQLDRLDHVMFAGFTHEPAERLAKRLVALT--PGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPRSRF  136 (421)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             899-999999999757875468757589999999999847--87758799947813699999999999998639975189


Q ss_pred             EEEECCHHHHHHHHHHH--------C-CC--CCEEEEECCCCCC-CCHHHCC-----CCCCEEEEEEEC-C---CCEEEC
Q ss_conf             99707368888876532--------3-87--6306740577765-7867678-----556579974202-4---202203
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQ--------L-SL--QDVREFTAPYGSL-PDFSKVD-----FDRDVVFVWNGT-T---SGVCVP  153 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~--------~-~~--~~~~~~~~~~g~~-~~~~~~~-----~~~~v~~~h~ET-s---tGv~~~  153 (391)
                      +...++|=++......-        . ..  ..+.....|.... ...+.++     ....++.+-.|. .   .|+..+
T Consensus       137 i~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~le~~~~~~~~~iAAvi~EP~iqg~GG~~~~  216 (421)
T PRK05964        137 LSLRGGYHGDTLGTMSVGMHGLFNATYGPLLFQVLALPVPRDYEQAYLDALEALLEKHAGEIAAVIVEPLVQGAGGMLFY  216 (421)
T ss_pred             EEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
T ss_conf             99738868985134323575334578888888876558998633889999999997479977899997884678997678


Q ss_pred             C------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCC-CCCCEEEEECHHHHHHHHHCCCCC
Q ss_conf             2------0350256861488640110-110--254--556857999700120017-665154456778887654114457
Q gi|254780153|r  154 D------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGG-EAGFGIIILSPASVERLEKYVPSW  221 (391)
Q Consensus       154 ~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~-ppGl~~v~~s~~al~~~~~~~~~~  221 (391)
                      .      ...+|+++++++|+|=|.+ ||-  .-+  +..++.=.+...-|+|++ --=++.++.+++..+.........
T Consensus       217 p~~y~~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDivt~gKgl~gG~~Pisav~~~~~i~~~~~~~~~~~  296 (421)
T PRK05964        217 DPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFDAFYSDDRAK  296 (421)
T ss_pred             CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHCCCCCCC
T ss_conf             88999999887100680465121102687567887543002589878872203578762489998589997631678776


Q ss_pred             CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                      ....++|+. -+-....+..++|+.++++.    ..++.+++.+.+.+.++...- .+.+.+  
T Consensus       297 ----------------~~~h~~T~~-gnpla~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~-~~~I~d--  352 (421)
T PRK05964        297 ----------------AFMHSPSYT-ANPLACAAANASLDLFEDEP----VLERVAALSAGLTEGLEPFRD-LPRVAD--  352 (421)
T ss_pred             ----------------CCCCCCCCC-CCHHHHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHHHHCC-CCCEEE--
T ss_conf             ----------------400378888-89699999999999996451----999999999999999997435-997676--


Q ss_pred             CCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             03653178-98247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r  302 TRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       302 ~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      .|...... +.+..+        ........+...+.++|.++..     .++.+|+.--=.++.+||+.+++.||.++.
T Consensus       353 vRG~GL~~~ie~~~~--------~~~~~~~~i~~~~~~~Glli~~-----~gn~ir~~PpL~it~~eid~~~~~l~~al~  419 (421)
T PRK05964        353 VRVLGAIGAVELDRP--------DDGRIGPALTAAFLDRGVLLRP-----LGNTIYLMPPYIITPEELARITDAIVEVAD  419 (421)
T ss_pred             EEECCEEEEEEEECC--------CCHHHHHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             410462999997257--------8679999999999978909996-----699999978936899999999999999996


Q ss_pred             H
Q ss_conf             9
Q gi|254780153|r  381 F  381 (391)
Q Consensus       381 ~  381 (391)
                      +
T Consensus       420 e  420 (421)
T PRK05964        420 E  420 (421)
T ss_pred             H
T ss_conf             2


No 128
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.20  E-value=3.6e-08  Score=71.30  Aligned_cols=316  Identities=16%  Similarity=0.098  Sum_probs=167.3

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             968999986321036532898--89999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|+ |.+++.+++=...|.+.  -+.+...+.-+.|.+++  |.+...+++..|||.+.|+++.=..  .....++...+
T Consensus        59 ~p~-i~~Av~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsEAve~AiklAr~~tgr~~ii~~~~  135 (429)
T PRK08117         59 HPK-VVQAIKEQADRLVHGGSGVIYYESILKLAEELAEIT--PGGLDMFFFSNSGAEAIEGALKLAKHVTKRQGIISFTG  135 (429)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             699-999999998634776777547769999999999848--78878899948746899999999998638985999845


Q ss_pred             CHHHHHHHHHH---------HC-CC--CCEEEEECCC------CCCCC------HHHCC-------CCCCEEEEEEECCC
Q ss_conf             36888887653---------23-87--6306740577------76578------67678-------55657997420242
Q gi|254780153|r  100 SFGLGWMSDIR---------QL-SL--QDVREFTAPY------GSLPD------FSKVD-------FDRDVVFVWNGTTS  148 (391)
Q Consensus       100 ~~~~r~~~~~~---------~~-~~--~~~~~~~~~~------g~~~~------~~~~~-------~~~~v~~~h~ETst  148 (391)
                      +|-++-.....         +. ..  ..+.....|+      +...+      +.+++       ....++.+-.|...
T Consensus       136 ~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAviiEPi~  215 (429)
T PRK08117        136 AFHGRTLGALSVTTSSSKYRKRYQPLLPSVYHAPYPYCFRCPIGRDPESCSLECLRDLESLFKRQIAPEEVAAIIIEPVL  215 (429)
T ss_pred             CCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf             77888660455316753234577899998366378863256567880566899999999999862488878999996466


Q ss_pred             C---EEECCE------EEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCC--CEEEEECHHH
Q ss_conf             0---220320------35025686148864011011025---4--55685--7999700120017665--1544567788
Q gi|254780153|r  149 G---VCVPDV------GFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSPAS  210 (391)
Q Consensus       149 G---v~~~~~------~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~a  210 (391)
                      |   +..|..      ..+|+++++++|+|=|.+=.++-   +  +.+++  |++  .--|+|++  |  ++.++.+++.
T Consensus       216 g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PDiv--~~gK~lgg--G~Plsav~~~~~i  291 (429)
T PRK08117        216 GEGGYIVPPKEFLQKVREICDEHGILLIFDEVQSGFGRTGKWFAAETFGVVPDIM--TVAKGIAS--GFPLSAVVASKEL  291 (429)
T ss_pred             CCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEE--EEEECCCC--CCCCCCCCCCHHH
T ss_conf             7889373888999999999876391797343110777667732654049899878--87101447--8986422147999


Q ss_pred             HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             87654114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r  211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN  290 (391)
Q Consensus       211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~  290 (391)
                      .+..   .                   ....++|+.--|+ ...+..++|+.+++++    ..++.+++.+.+++.+...
T Consensus       292 ~~~~---~-------------------~~~~~~T~~gnp~-~~aaa~a~L~~~~~~~----l~~~v~~~g~~l~~~L~~l  344 (429)
T PRK08117        292 MDQW---P-------------------LGAHGTTFGGNPV-ACAAALATLEVIKEEK----LLENANNMGAYALERLEKL  344 (429)
T ss_pred             HHCC---C-------------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHH
T ss_conf             7066---8-------------------8886858998989-9999999999997556----9999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf             9716766882003653178-982473101137345678889999988862828726655676750568615888999999
Q gi|254780153|r  291 DWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLL  369 (391)
Q Consensus       291 ~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~  369 (391)
                      ---.+.+.  +.|...... +.+.++...     ........+...+.++|+++...|  ..++.+|+.--=.++.+||+
T Consensus       345 ~~~~p~v~--~VRG~Gl~~giel~~~~~~-----~~~~~~~~i~~~~~~~Gll~~~~g--~~~n~i~~~PPL~is~~eid  415 (429)
T PRK08117        345 KEKYPVIG--DVRGIGLMIGIEFVDETGE-----PDGDAVEKILDKCLENGLLLYGCG--NDGNVLRFIPPLTVTKEEID  415 (429)
T ss_pred             HHHCCCEE--EEECCCEEEEEEEECCCCC-----CCHHHHHHHHHHHHHCCCEEEECC--CCCCEEEEECCCCCCHHHHH
T ss_conf             97199878--8522667999999648889-----469999999999996995898447--99998999799779999999


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999999999
Q gi|254780153|r  370 LLCDWLRWVFYFQ  382 (391)
Q Consensus       370 ~L~~aLe~~~~~~  382 (391)
                      .+++.||.++.+.
T Consensus       416 ~~~~~l~~al~e~  428 (429)
T PRK08117        416 QGLSILDKGLGEY  428 (429)
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999999976


No 129
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.20  E-value=1.1e-08  Score=74.68  Aligned_cols=312  Identities=14%  Similarity=0.133  Sum_probs=183.2

Q ss_pred             HHHHHHHHCCCC-----C-CC---C-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             999863210365-----3-28---9-889999999999999996889985799974873489998753205789707997
Q gi|254780153|r   28 SLGILEGALLGR-----S-HR---C-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        28 v~~~~~~~~l~~-----s-HR---s-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      |++++...+-+.     . .|   + .-+.++=.-+.++.+++|+...   +=+-+-||+.|+-++.+.|++|||.++..
T Consensus        47 v~~a~gS~ltnkYaEGyPg~RyY~G~~~iD~iE~la~~rak~LF~a~~---anVqp~SGs~AN~av~~all~PGD~im~l  123 (422)
T PRK13034         47 VLQAQGSVLTNKYAEGYPGKRYYGGCEHVDEVEALAIERAKQLFGADY---ANVQPHSGSQANGAVYLALLKPGDTILGM  123 (422)
T ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             999856621264668899865547753699999999999999849996---35477861999999999964899868843


Q ss_pred             E----CCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECCCCCCE
Q ss_conf             0----73688888765323876306740-57776578676785-----565799742024202203--203502568614
Q gi|254780153|r   98 W----ESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPESREGL  165 (391)
Q Consensus        98 ~----g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~~~~~l  165 (391)
                      .    |+.+.....-+.-.. .+...+. .+.....|.+++..     .+.+.++-- ++.--..|  ....++.+.+++
T Consensus       124 ~l~~GGHltHG~~~~~sg~~-~~~~~Y~vd~~~~~IDyd~l~~~a~~~kPklIi~G~-Say~r~id~k~~reIAd~vGA~  201 (422)
T PRK13034        124 SLDAGGHLTHGAKVALSGKW-FNAVQYGVDRDTGLIDYDQVERLAVEHKPKLIIAGF-SAYPRTLDFARFRAIADSVGAI  201 (422)
T ss_pred             CCCCCCCCCCCCCCCCCCCE-EEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCHHHHHHHHHHHCCE
T ss_conf             67777625578875534560-478982175323822799999998731998699666-1244212889999999872977


Q ss_pred             EEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC
Q ss_conf             8864011011-----02545568579997001200176651544567788876541144577831232001123210334
Q gi|254780153|r  166 VICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF  240 (391)
Q Consensus       166 livD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (391)
                      +++|+.--.|     ..|=+....|++.++.+|-|.||-|=-+++=+++.-+++....                     +
T Consensus       202 l~~D~AHiaGLIA~g~~psP~~~ADvvT~TTHKTLrGPrGGiIl~~~~el~~kId~av---------------------F  260 (422)
T PRK13034        202 LMVDMAHIAGLVAAGRHPNPVPHAHVVTTTTHKTLRGPRGGMILTNDEEIAKKINSAV---------------------F  260 (422)
T ss_pred             EEECHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHCCC---------------------C
T ss_conf             9811565545410333699877752886775147789884357526699999864333---------------------8


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf             78644666448899999999862010318999999997799999998747971676688200365317898247310113
Q gi|254780153|r  241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL  320 (391)
Q Consensus       241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~  320 (391)
                       ..+-..|-.+.|.+...++.+.... +.....++..++++.+-+.+...+ +....  -...+.. +.+.+....+.  
T Consensus       261 -Pg~qggp~~h~iAa~Ava~~Ea~~~-~f~~Ya~qVv~NAkaLa~~L~~~G-~~vv~--ggTdnHl-vlvDl~~~gi~--  332 (422)
T PRK13034        261 -PGLQGGPLMHVIAAKAVAFGEALEP-GFKTYIDQVIANAQALAEVLKARG-YDLVT--GGTDNHL-LLVDLRPKGLT--  332 (422)
T ss_pred             -CCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CCCCCCE-EEEECCCCCCC--
T ss_conf             -8645671577899999999996687-699999999999999999999789-80457--9998763-66535656775--


Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEECCCC--C--CC--CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHH
Q ss_conf             734567888999998886282872665--5--67--67505686158----88999999999999999999
Q gi|254780153|r  321 DINSQKSFCKSMLSFLEKEEIAYDIGS--Y--RD--APLGLRVWVGV----TVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~--~--r~--~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~  381 (391)
                              -+.....|.+.|+.+.-+.  +  ++  .+.|+|||+--    -..++|+..+.+.|..++..
T Consensus       333 --------G~~a~~~L~~~gI~~Nkn~iP~D~~~p~~~sGiRiGt~a~TtRG~~e~em~~ia~~I~~vl~~  395 (422)
T PRK13034        333 --------GKQAEQALERAGITVNKNGIPFDPEKPFVTSGIRIGTPAGTTRGFGAAEFREIAGWILDVLDA  395 (422)
T ss_pred             --------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             --------699999999839586678688999899889812667788983899889999999999999973


No 130
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.20  E-value=1e-07  Score=68.47  Aligned_cols=322  Identities=14%  Similarity=0.044  Sum_probs=166.3

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHH--HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             9689999863210365328988--9999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVL--GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~--f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|+ |.+++..++-...|-+..  +..-..+..+.|.++.... ..+++| ..|||.++|+++.=..  ..+..++...+
T Consensus        59 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f-~~SGSEAvE~AlKlAr~~tgr~~ii~~~~  135 (443)
T PRK08360         59 NPR-VVKAIKEQADKLIHASYIYAFPVEPLLLAEKLAEIAPID-NPKVSF-GLSGGDANDGAIKFARAYTKRRKILSYMR  135 (443)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCEEEE-ECCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             699-999999998636873577557648999999999857998-675997-48678899999999887629973874046


Q ss_pred             CHHHHHHHHHHHCC---------C--CCEEEEECC------CCCCCC------HH----HCC---CCCCEEEEEEECCC-
Q ss_conf             36888887653238---------7--630674057------776578------67----678---55657997420242-
Q gi|254780153|r  100 SFGLGWMSDIRQLS---------L--QDVREFTAP------YGSLPD------FS----KVD---FDRDVVFVWNGTTS-  148 (391)
Q Consensus       100 ~~~~r~~~~~~~~~---------~--~~~~~~~~~------~g~~~~------~~----~~~---~~~~v~~~h~ETst-  148 (391)
                      +|-++.......-+         .  .++..+..|      ++..+.      .+    .++   ....++.+-.|... 
T Consensus       136 syHG~T~gals~tg~~~~~~~~~~~~~~~~~vp~p~~~r~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAviiEPvqG  215 (443)
T PRK08360        136 SYYGSTYGAMSLTGLDFEVRAIVGELSDVHYIPYPNCYRCPFGKEPGSCKMECVEYLKEKFEGEVYAEGVAALFAEPIQG  215 (443)
T ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf             65768601033137754545567899996681798643576788852136999999999986203668757999867678


Q ss_pred             --CEEECC------EEEECCCCCCEEEEEECCH-HHHC--CC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHH
Q ss_conf             --022032------0350256861488640110-1102--54--556857999700120017665154456778887654
Q gi|254780153|r  149 --GVCVPD------VGFIPESREGLVICDATSA-VFAR--HI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLE  215 (391)
Q Consensus       149 --Gv~~~~------~~~~~~~~~~llivD~vSs-~g~~--p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~  215 (391)
                        |+..|.      ...+|+++++++|+|=|.+ ||-.  -+  +..++.=.+...-|+|++=-=++.++++++..+...
T Consensus       216 ~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~~G~Pisav~~~~ei~~~~~  295 (443)
T PRK08360        216 DSGMVVPPENYFKKVKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLP  295 (443)
T ss_pred             CCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf             88418688899768988777659079851130387654405576457969865776344457888623111498985048


Q ss_pred             HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             11445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r  216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN  295 (391)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~  295 (391)
                                            ....++|+.-- -....+..++|+.+++++    ..++.+++.+.+.+.+++..--.+
T Consensus       296 ----------------------~~~h~~T~~gn-pl~caaa~a~L~~i~~~~----l~~~~~~~G~~l~~~L~~l~~~~p  348 (443)
T PRK08360        296 ----------------------PLSHAFTLSGN-PTASRAALAVIEEIEEKD----LLKRAEKLGNYTKKRLEEMKEKHE  348 (443)
T ss_pred             ----------------------CCCCCCCCCCC-HHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             ----------------------87656687899-799999999999998635----999999999999999999887189


Q ss_pred             CCCCCCCCCCCEEEEEE-CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             66882003653178982-47310113734567888999998886282872665567675056861588899999999999
Q gi|254780153|r  296 LAVDETTRSNTSICMKI-VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDW  374 (391)
Q Consensus       296 ~~~~~~~rS~~~v~~~~-~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~a  374 (391)
                      .+.+-.-+..+. .+.+ .|........+    ..+.+...+.++|.++...    .++.+|+.--=.++.+||+.+++.
T Consensus       349 ~i~dVRG~Gl~~-gie~v~d~~~~~~~~~----~~~~i~~~~~~~Glli~~~----~~~~i~~~PPL~it~~eid~~~~~  419 (443)
T PRK08360        349 LIGDVRGLGLMI-GVDLVKDRETKERAYE----ETKKVVWRAFELGLIVTFF----QGNVLRIEPPLTIEEEVLDEGLDI  419 (443)
T ss_pred             CEEEECCCCEEE-EEEEECCCCCCCCCHH----HHHHHHHHHHHCCCEEEEC----CCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             888520364699-9998127765544579----9999999999689388116----999899979912899999999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780153|r  375 LRWVFYFQKI  384 (391)
Q Consensus       375 Le~~~~~~k~  384 (391)
                      ||.++.+...
T Consensus       420 l~~al~ev~~  429 (443)
T PRK08360        420 LEEAIEDVEE  429 (443)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999985


No 131
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.19  E-value=7.3e-09  Score=75.73  Aligned_cols=305  Identities=16%  Similarity=0.175  Sum_probs=162.6

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEEE
Q ss_conf             8899999999999999968899857999748734899987532057897079970736888--88765323876306740
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREFT  121 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~~  121 (391)
                      .+-.+.+++.   |..|=+..   .+ ++.+||-+|..+++++++++|+.+++...-||.-  .+.......+.+++.++
T Consensus        63 NPT~~~LE~~---la~LEgg~---~a-~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~~~~vd  135 (433)
T PRK08134         63 NPTTAVLEER---VAALEGGV---GA-IATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLPRFGIETTFVK  135 (433)
T ss_pred             CHHHHHHHHH---HHHHCCCC---CE-EEECCHHHHHHHHHHHHCCCCCEEEECCCEECCHHHHHHHHHHHCCEEEEEEC
T ss_conf             8669999999---99980998---27-98538899999999974899998997188077379999987763483799988


Q ss_pred             CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCE-----EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf             57776578676785--56579974202420220320-----3502568614886401--101102545568579997001
Q gi|254780153|r  122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDV-----GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ  192 (391)
Q Consensus       122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~-----~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ  192 (391)
                      ..     +++.++.  .+...+++.||.+--.+.+.     ..+++++++++|||-+  +-+...|++ .++|+++-|.-
T Consensus       136 ~~-----d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~aia~iA~~~g~~~vVDNT~atP~~~~Pl~-~GaDivvhS~T  209 (433)
T PRK08134        136 PR-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFE-HGADLVYHSAT  209 (433)
T ss_pred             CC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHH-HCCCEEEEECC
T ss_conf             97-----8467887559875289985389997503589999999975676199716651153058055-28988999654


Q ss_pred             HCCCCCCCC--EEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH--------
Q ss_conf             200176651--544567788-876541144577831232001123210334786446664488999999998--------
Q gi|254780153|r  193 KVLGGEAGF--GIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL--------  261 (391)
Q Consensus       193 K~l~~ppGl--~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~--------  261 (391)
                      |-|+|-.-+  |+|+.+.+. |+..      ...|.   +......+.+....+ -+.++.+.+.+....++        
T Consensus       210 KYl~GHsDvlgG~vv~~~~~~w~~~------~~~~~---l~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~lr~~G~~lsp  279 (433)
T PRK08134        210 KFLGGHGTAIGGVLVDGGRFDWEAS------GKFPE---LTEPYAGFHGMVFDE-ESTVAAFLLRARREGLRDFGACLSP  279 (433)
T ss_pred             EEECCCCCEEEEEEECCCCCCHHHC------CCCHH---HHCCHHHHCCCHHHH-HHCHHHHHHHHHHHHHHHCCCCCCH
T ss_conf             6725887547789851652016550------44166---637615430404665-4047899999999987642766683


Q ss_pred             ---H--HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CC-CCEEEEEECCCCCCCCCH
Q ss_conf             ---6--2010318999999997799999998747971676-----688200--------36-531789824731011373
Q gi|254780153|r  262 ---W--LKKMGGLSACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RS-NTSICMKIVDSDIASLDI  322 (391)
Q Consensus       262 ---~--i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS-~~~v~~~~~d~~~~~~~~  322 (391)
                         |  +..-..+.-|.+||.+++..+-+|+++++.....     ...|.+        .+ -.+++|.+....      
T Consensus       280 ~da~L~lRGL~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~r~~~~G~Gg~~sf~l~g~~------  353 (433)
T PRK08134        280 MNAWQLLQGIETLPLRMERHVANTRAVVEFLASHPAVERVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGR------  353 (433)
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCH------
T ss_conf             67799873677689999999987999999998589967898989899802999998789996589999996999------


Q ss_pred             HHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------C-CEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             45678889999988862828726655676----------------------7-505686158889999999999999999
Q gi|254780153|r  323 NSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------P-LGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       323 ~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~-~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      +.    ...+...|.--..+..+|+..+.                      + .-+|++++    .||++.|++-|+.|+
T Consensus       354 ~~----~~~f~~~l~lf~~a~SlGg~eSLi~~Pa~~th~~~~~e~~~~~Gi~~~lvRlSvG----lEd~eDLi~DL~qAL  425 (433)
T PRK08134        354 AA----GRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIG----LEDADDLIDDLKRAL  425 (433)
T ss_pred             HH----HHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHH
T ss_conf             99----9999983881301226687530346763234635899999866989394999941----199999999999999


Q ss_pred             HHHHHH
Q ss_conf             999998
Q gi|254780153|r  380 YFQKIS  385 (391)
Q Consensus       380 ~~~k~~  385 (391)
                      +..|.+
T Consensus       426 ~aa~~~  431 (433)
T PRK08134        426 KAAEKA  431 (433)
T ss_pred             HHHHHC
T ss_conf             998874


No 132
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.19  E-value=3.7e-07  Score=64.86  Aligned_cols=322  Identities=12%  Similarity=0.070  Sum_probs=175.5

Q ss_pred             CCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCH----HHHHHHHHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHH
Q ss_conf             8998886888776-8968999986321036532898----899999999999999968899-857999748734899987
Q gi|254780153|r   10 KPKRPFFSSGPCA-KRPGWSLGILEGALLGRSHRCV----LGKERINKAIQLTRKVLEVPE-NYRIAIVPASDTGAVEMA   83 (391)
Q Consensus        10 ~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~sHRs~----~f~~i~~~~~~~l~~l~~~p~-~y~v~~l~GsgT~~~ea~   83 (391)
                      .|+-.+|+-|=-. .+|..+++++.+.+-. +|..+    =..++-+.+.+-+++-++.+= ..+|++ +.|++.++..+
T Consensus        28 ~pDvI~l~~g~pdf~~p~~i~~a~~~~~~~-~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~I~i-t~G~~~al~~~  105 (383)
T PRK06348         28 FPDIIDLSLGDPDLITDESIIQAAFEDAKK-GHTRYTDSTGDKELIEEIINYYKKDYNLSFKENEIMA-VVGACHGMYLA  105 (383)
T ss_pred             CCCEEECCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEE-ECCHHHHHHHH
T ss_conf             999288999688999889999999999862-8998899868999999999999998789997674999-48989999999


Q ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-
Q ss_conf             5320578970799707368888876532387630674-057776578676785-----565799742024202203203-
Q gi|254780153|r   84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-  156 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-  156 (391)
                      +..++.+||.+++..=.|..- ...+...+...+.+. ....+..++++.++.     .+.+.++.=..-||...+..+ 
T Consensus       106 ~~~l~~pGD~Vlv~~P~Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~i~~~tk~iil~~P~NPTG~v~~~e~l  184 (383)
T PRK06348        106 LQSILDPGDEVIIHEPYFTPY-KDQVEMVGGKPIIFETYEEDGFQINVDKLEALITSKTKAIILNSPNNPTGAVFSKETL  184 (383)
T ss_pred             HHHHCCCCCEEEEECCCCCHH-HHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf             999659999899806986026-9999980886253244566686579689898568787299989997988887777899


Q ss_pred             ----EECCCCCCEEEEEECCHHHH--CC-CC---CC---CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCC
Q ss_conf             ----50256861488640110110--25-45---56---857999700120017665--154456778887654114457
Q gi|254780153|r  157 ----FIPESREGLVICDATSAVFA--RH-ID---FN---KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSW  221 (391)
Q Consensus       157 ----~~~~~~~~llivD~vSs~g~--~p-~d---~~---~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~  221 (391)
                          .+|..++..+|.|-+=+-..  .+ ..   ..   +--+.+.|.-|.++ -||  +|.++..+...+.....+   
T Consensus       185 ~~l~~la~~~~i~visDEiY~~l~~~~~~~p~~~~~~~~~~~I~~~S~SK~~~-~~G~RiG~~i~p~~~~~~~~~~~---  260 (383)
T PRK06348        185 EEIAKVAIENDLVIISDEVYDGFTFYEDFCPMASLAGMKERTITFGSFSKDFA-MTGWRIGYVIAPDYIINTMKNIN---  260 (383)
T ss_pred             HHHHHHHHHCCEEEEECCCHHHHCCCCCCCCHHHCCCCCCEEEEEECCHHHCC-CCCCEEEEEEECHHHHHHHHHHH---
T ss_conf             99997653068699851433442038999883222566651899921423115-88860799982799999999997---


Q ss_pred             CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                          ..+...+|+..-++...+++.-.  .-++.+.+..+++.+.+++.+.+.++.....++  
T Consensus       261 --------------------~~~~~~~~~~~q~aa~~al~~~~--~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~p~--  316 (383)
T PRK06348        261 --------------------EGICFSAPTISQRAAIYALKHRD--TIVPPIKEEFQKRMEYAYSRIESIPKLSLHPPK--  316 (383)
T ss_pred             --------------------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC--
T ss_conf             --------------------31766687299999999985869--999999999999999999999748995761788--


Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             036531789824731011373456788899999-8886282872665-5676750-5686158889999999999999
Q gi|254780153|r  302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                        +..-+-+.++....   +       ..++.. .+.+.|+++--|- +...|.+ +|++.  ..+.+.++.-++-|+
T Consensus       317 --G~~y~w~~~~~~~~---~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRls~--~~~~~~l~ea~~Rl~  380 (383)
T PRK06348        317 --GSIYAFINIKKTGL---S-------SVEFCEYLLKEAHVLVIPGKAFGKSGEGYIRLAC--TVGLEELEEAFNRIE  380 (383)
T ss_pred             --EEEEEEEECCCCCC---C-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEE--ECCHHHHHHHHHHHH
T ss_conf             --16799788999998---9-------9999999998689999785454889999799998--489999999999997


No 133
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.19  E-value=1e-07  Score=68.45  Aligned_cols=327  Identities=12%  Similarity=0.065  Sum_probs=169.1

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHH--HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCC-CE
Q ss_conf             9689999863210365328988--999999999999999688998579997487348999875320------5-789-70
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVL--GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYR-GV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~--f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~-~~   93 (391)
                      +|+ |.+++.+++-...|-+..  ..+...+.-+.|.++.  |++..-+|+..|||.++|+++-=.      . .++ ..
T Consensus        76 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~LAe~L~~~~--p~~~~~v~f~~SGseA~E~AiKlAr~y~~~~g~~~r~~  152 (462)
T PRK06916         76 VPE-LDEAIREQLNKIAHSTMLGLANVPSILLAEKLIEVV--PEGLKKVFYSDSGSSAVEIAIKMAFQYWQHKGKPKKQR  152 (462)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             699-999999998665685677767788999999999857--75548799549749999999999999999828887637


Q ss_pred             EEEEECCHHHHHHHHHHHCC--------CC---CEEEEEC------CCCCCCC------HHHC-----CCCCCEEEEEEE
Q ss_conf             79970736888887653238--------76---3067405------7776578------6767-----855657997420
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLS--------LQ---DVREFTA------PYGSLPD------FSKV-----DFDRDVVFVWNG  145 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~--------~~---~~~~~~~------~~g~~~~------~~~~-----~~~~~v~~~h~E  145 (391)
                      ++...++|=++-..-+.--+        ..   .......      +.+..+.      ++++     +....++.+-.|
T Consensus       153 ii~~~~syHG~T~ga~s~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~iAaviiE  232 (462)
T PRK06916        153 FVTLKEAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKEEIVKKHLEEMEELLKEKHEEIAAIIVE  232 (462)
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             99836885877520010467411357777878884676899755676789878999999999999997579976699996


Q ss_pred             C-C---CCEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHH
Q ss_conf             2-4---2022032------035025686148864011011025---4--5568579997001200176-65154456778
Q gi|254780153|r  146 T-T---SGVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPA  209 (391)
Q Consensus       146 T-s---tGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~  209 (391)
                      + .   .|+..+.      ...+|+++++++|+|=|.+=.++-   +  +..++.=.+...-|+|++= .-++.++.+++
T Consensus       233 P~iqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~av~~~~~  312 (462)
T PRK06916        233 PLMQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDILTAGKGLTGGYLPIAITVTTDE  312 (462)
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHCHHCCCCCCCEEEEEEHHH
T ss_conf             14457899657878999999999860597267254302787556711664279668834312110378776279976189


Q ss_pred             HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r  210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE  289 (391)
Q Consensus       210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~  289 (391)
                      ..+........        ..       ....++|+. -+-....+..++|+.+++++    ..++.+++.+.+.+.++.
T Consensus       313 i~~~~~~~~~~--------~~-------~~~hg~T~~-GnPla~Aaa~a~L~~i~~e~----l~~~v~~~g~~l~~~L~~  372 (462)
T PRK06916        313 IYNAFLGDYEE--------QK-------TFFHGHSYT-GNPLGCAVAIANLELYEKTN----LIEQVARKTEYVATQLED  372 (462)
T ss_pred             HHHHHCCCCCC--------CC-------CCCCCCCCC-CCHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHH
T ss_conf             88753166545--------66-------655677788-88799999999999999668----899999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCCEEE-EE-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             79716766882003653178-98-24731011373456788899999888628287266556767505686158889999
Q gi|254780153|r  290 NDWIENLAVDETTRSNTSIC-MK-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED  367 (391)
Q Consensus       290 ~~~~~~~~~~~~~rS~~~v~-~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d  367 (391)
                      +.- .+.+.+  .|...... +. +.++.... ..+........+...+.+.|.++..     .++.+|+.--=.++.++
T Consensus       373 l~~-~~~v~d--VRG~Gl~~gielv~~~~~~~-~~~~~~~~~~~i~~~~~~~Gll~~~-----~gn~i~~~PPL~it~~e  443 (462)
T PRK06916        373 LFA-LKHVGD--IRQLGLMVGIELVKNKETKE-PFPWTERVGVQVCKRSRELGMILRP-----LGNTIVFMPPLASTIDE  443 (462)
T ss_pred             HHC-CCCEEE--EECCCCEEEEEEECCCCCCC-CCCHHHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHHH
T ss_conf             626-998587--72477189999832665467-7855789999999999969949974-----49999998993488999


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999999
Q gi|254780153|r  368 LLLLCDWLRWVFYFQ  382 (391)
Q Consensus       368 v~~L~~aLe~~~~~~  382 (391)
                      |+.+++.|+.++.++
T Consensus       444 id~~~~il~~al~ev  458 (462)
T PRK06916        444 LDEMLRILYKAISDV  458 (462)
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             999999999999999


No 134
>PRK09044 consensus
Probab=99.19  E-value=1.4e-07  Score=67.63  Aligned_cols=314  Identities=14%  Similarity=0.051  Sum_probs=167.8

Q ss_pred             CHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCC-CE
Q ss_conf             9689999863210365328--9889999999999999996889985799974873489998753205-------789-70
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHR--CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYR-GV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~-~~   93 (391)
                      +|+ |.+++.+++=...|-  +.-..+...+.-+.|.+++  |.+..-+++..|||.++|+++.=..       .++ ..
T Consensus        60 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~la~~L~~~~--p~~l~~v~f~~SGsEAvE~AiKlA~~y~~~r~~tgr~~  136 (418)
T PRK09044         60 HPH-IAEAVREQLDRMPHVMFGGLAHEPAYRLASRLAAIL--PGDLERVFFSDSGSVAVEVAMKMAVQYWLNRGERGRTK  136 (418)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             899-999999999758883458746779999999999857--88758698628678999999999999998624567762


Q ss_pred             EEEEECCHHHHHHHHHHHCCCC------------CEEEEECCCCCCCCHHHC-----CCCCCEEEEEEEC-CC---CEEE
Q ss_conf             7997073688888765323876------------306740577765786767-----8556579974202-42---0220
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSLQ------------DVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGT-TS---GVCV  152 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~~------------~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ET-st---Gv~~  152 (391)
                      ++...++|=++......-.+..            .......|. .....+.+     .....++.+-.|. ..   |+..
T Consensus       137 ii~~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~p~~~~~~~p~-~~~~~~~l~~~~~~~~~~iAavi~EP~iqg~gG~~~  215 (418)
T PRK09044        137 FLAFRGGYHGDTLATMAVCDPEEGMHSLFAGVLPEQVIADLPR-DAASEAALDALLERHGGEIAAILVEPLVQGAGGMLF  215 (418)
T ss_pred             EEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCC-CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
T ss_conf             8996187778666662115775576677789899761457999-867899999999757997789999466357898748


Q ss_pred             CC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCC
Q ss_conf             32------035025686148864011011025---4--5568579997001200176-6515445677888765411445
Q gi|254780153|r  153 PD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPS  220 (391)
Q Consensus       153 ~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~  220 (391)
                      +.      .+.+|.++++++|+|=|.+=.++-   +  +..++.=.+...-|+|++= -=++.++.+++..+....-.+.
T Consensus       216 ~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Plsav~~~~~i~~~~~~~~~~  295 (418)
T PRK09044        216 HDPEVLRRLRRLADRHGLLLIFDEIFTGFGRTGTMFAFEQAGVVPDIVTLSKALTGGTLPLAATVASRRVFEAFWSDDPG  295 (418)
T ss_pred             CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEECHHCCCCCCCCEEEEECHHHHHHHHCCCCC
T ss_conf             98899999999998749867721220368766785323325958872430200148877610235539999975037987


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE  300 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~  300 (391)
                      .                ....++|+.--|+ ...+..++|+.+++++    ..++.+++.+.+.+.++.... .+.+.+ 
T Consensus       296 ~----------------~~~hg~T~~gnpl-~cAaala~L~~i~~~~----l~~~~~~~g~~l~~~L~~~~~-~~~v~~-  352 (418)
T PRK09044        296 H----------------ALMHGPTYMGNPL-ACAAANASLDLFEDEP----RLEQVAAIEAQLRAGLEPCRD-LPGVVD-  352 (418)
T ss_pred             C----------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHCC-CCCEEE-
T ss_conf             5----------------5021788889989-9999999999997347----999999999999999997536-997798-


Q ss_pred             CCCCCCE-EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             0036531-789824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  301 TTRSNTS-ICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       301 ~~rS~~~-v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                       .|.... ..+.+.++..           ...+...+.++|+.+..     .++.+|+.---.++.+|++.++++|+.++
T Consensus       353 -VRG~Glm~~iel~~~~~-----------~~~~~~~~~~~Gv~v~~-----~gn~irl~PpL~it~~eid~~~~~l~~~l  415 (418)
T PRK09044        353 -VRVLGAIGVVELERIPP-----------LDDLRARFVDRGVWIRP-----FRNIVYLTPAFTIAEDDLARLTAAIRQVV  415 (418)
T ss_pred             -EEECCEEEEEEECCCCC-----------HHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             -80055799999368576-----------99999999978977974-----59999997995789999999999999998


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r  380 YF  381 (391)
Q Consensus       380 ~~  381 (391)
                      .+
T Consensus       416 ~E  417 (418)
T PRK09044        416 AE  417 (418)
T ss_pred             HC
T ss_conf             57


No 135
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.19  E-value=1.4e-07  Score=67.51  Aligned_cols=320  Identities=12%  Similarity=0.098  Sum_probs=164.9

Q ss_pred             CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCC-CE
Q ss_conf             96899998632103653289--88999999999999999688998579997487348999875320------5-789-70
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYR-GV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~-~~   93 (391)
                      +|+ |.+++..++=...|-+  .-..+...+.-+.|.+++.  .+..-+|+..||+.++|+++.=-      - .++ ..
T Consensus        71 ~p~-v~~Ai~~Ql~~l~~~~~~~~~~~~~~~lae~L~~~~p--~~l~~v~f~~SGSEA~E~AiKlA~~~~~~rg~~~r~~  147 (452)
T PRK06943         71 NPR-INAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTG--HTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKRE  147 (452)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             699-9999999986574713577687699999999997466--6557599608718999999999999998618998605


Q ss_pred             EEEEECCHHHHHHHHHHHCCC-----------CCEEEEECC------CCCCCC------HHHC-----CCCCCEEEEEEE
Q ss_conf             799707368888876532387-----------630674057------776578------6767-----855657997420
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSL-----------QDVREFTAP------YGSLPD------FSKV-----DFDRDVVFVWNG  145 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~~~------~g~~~~------~~~~-----~~~~~v~~~h~E  145 (391)
                      ++...++|-++-..-..--+.           ..+.....|      .++...      ++++     +....++.+-.|
T Consensus       148 ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~iAAvivE  227 (452)
T PRK06943        148 FVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVE  227 (452)
T ss_pred             EEECCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             87347886887630146268512033567767776245899755678888777899999999999998569977899995


Q ss_pred             C----CCCEEECC------EEEECCCCCCEEEEEECCHHHHCC---CC--CCCC--EEEEECCHHCCCCC-CCCEEEEEC
Q ss_conf             2----42022032------035025686148864011011025---45--5685--79997001200176-651544567
Q gi|254780153|r  146 T----TSGVCVPD------VGFIPESREGLVICDATSAVFARH---ID--FNKL--DVVTFSAQKVLGGE-AGFGIIILS  207 (391)
Q Consensus       146 T----stGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~d--~~~i--Dv~~a~sQK~l~~p-pGl~~v~~s  207 (391)
                      .    +.|+..+.      ...+|+++++|+|+|=|.+=.++-   +-  ..++  |++  ..-|+|++= .=++.++.+
T Consensus       228 P~iqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDii--t~gKgl~gG~~Plsav~~~  305 (452)
T PRK06943        228 PLVQCAAGMAMHDPSYVRGLRALCDEYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL--CLSKGISGGYLPLSLVLSR  305 (452)
T ss_pred             CCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE--EECCHHHCCCCCCCEEEEC
T ss_conf             75146796185889999999999864496487133202886451771023469988299--9765212898653124303


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r  208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI  287 (391)
Q Consensus       208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i  287 (391)
                      ++..+....-....                ....++|+ +-+-....+..++|+.+++++    ..+|.+++.+.+++.+
T Consensus       306 ~ei~~~~~~~~~~~----------------~~~h~~T~-~GnplacAaala~L~~l~~e~----l~~~~~~~g~~l~~~L  364 (452)
T PRK06943        306 DEIFDAFYDDDTTR----------------GFLHSHSY-TGNPLACRAAVATLDLFARDD----VLARNARKSALLRAAL  364 (452)
T ss_pred             HHHHHHHCCCCCCC----------------CCCCCCCC-CCCHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf             88998643799767----------------86757788-988899999999999998657----9999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf             747971676688200365317-8982473101137345678889999988862828726655676750568615888999
Q gi|254780153|r  288 QENDWIENLAVDETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKE  366 (391)
Q Consensus       288 ~~~~~~~~~~~~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~  366 (391)
                      ..+. -.+.+.+  .|..... .+.+..+..      ....+.+.+.....++|.++..     .|..+|+.--=.++.+
T Consensus       365 ~~l~-~~~~V~d--VRG~GL~~gvel~~~~~------~~~~~~~~i~~~~~~~Gll~~~-----~g~~i~l~PPL~it~~  430 (452)
T PRK06943        365 APLA-AHPQVRH--LRQRGTIFAFDVALDGD------AARTFSRRFFEHALERELLLRP-----IGTTVYLMPPYVLDDE  430 (452)
T ss_pred             HHHH-CCCCEEE--EEECCEEEEEEECCCCC------CCHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHH
T ss_conf             9873-5998888--63075899999667876------4579999999999969928986-----4999999799038899


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999
Q gi|254780153|r  367 DLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       367 dv~~L~~aLe~~~~~~k  383 (391)
                      +++.+++.|+.++.+.=
T Consensus       431 eid~~~~~L~~aL~~v~  447 (452)
T PRK06943        431 EIAWLAQRTRATLDATL  447 (452)
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999


No 136
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.19  E-value=5e-09  Score=76.76  Aligned_cols=304  Identities=18%  Similarity=0.133  Sum_probs=166.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-...+++.   |..|-+...   . +..+||-+|+.+++++++++|+.+++...-||.  ++........+.+++.+
T Consensus        67 gNPT~~~LE~~---la~LEg~~~---a-~~~sSGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~fv  139 (436)
T PRK07812         67 MNPTQDVVEQR---IAALEGGVA---A-LFLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFV  139 (436)
T ss_pred             CCHHHHHHHHH---HHHHHCCCC---E-EEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf             88669999999---999829987---8-9964799999999999618898899948866878999999976528741696


Q ss_pred             ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEECC---EE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             05777657867678--55657997420242022032---03--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVPD---VG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~~---~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +.+    .+++.++  ..+...+++.||.+--.+.+   ..  .+++.+++++|||-+  |-+...|++. ++|+++-|.
T Consensus       140 ~d~----~d~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivihS~  214 (436)
T PRK07812        140 EDP----DDLDSWRAAVRPNTKAFFAETISNPQIDILDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEH-GADIVVHSA  214 (436)
T ss_pred             CCC----CCHHHHHHHCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC-CCCEEEEEC
T ss_conf             799----889999974586743999964899860523669999999985992996268646230376414-898899964


Q ss_pred             HHCCCCCCCC--EEEEECHH-HHHHH--HHCCCCCCCCCHH--HCCHH--------HHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             1200176651--54456778-88765--4114457783123--20011--------232103347864466644889999
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPA-SVERL--EKYVPSWPLPKIF--RMVKG--------GRVMEGLFCGETINTPSLLCIEDY  256 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~-al~~~--~~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~~~~TP~v~~i~al  256 (391)
                      -|-|+|-.-+  |+|+.+.+ -|.+.  .....  +.+.+.  .|...        .+.......|.   +++-+.-|.+
T Consensus       215 TKyi~GHsDvlgG~vv~~~~~~w~~~r~~~~~~--~d~~~~~~~~~~l~~~~~~~~~r~~~~r~~G~---~lsP~da~L~  289 (436)
T PRK07812        215 TKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTT--PDPSYHGVVFAELGPPAYALKARVQLLRDLGS---AASPFNAFLI  289 (436)
T ss_pred             CEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC--CCHHHHCCHHHHCCCHHHHHHHHHHHHHHCCC---CCCCHHHHHH
T ss_conf             503158977043699845755400023656577--87576141576415488999999999864111---3580777898


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------------C-CC-CCEEEEEECCCCCCCCC
Q ss_conf             999986201031899999999779999999874797167668820-------------0-36-53178982473101137
Q gi|254780153|r  257 IDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET-------------T-RS-NTSICMKIVDSDIASLD  321 (391)
Q Consensus       257 ~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~-------------~-rS-~~~v~~~~~d~~~~~~~  321 (391)
                      ...      -..+.-|.+||.+++..+-+|+++++..... ..|.             . ++ -.++.|.+....     
T Consensus       290 lRG------L~TL~lRm~r~~~nA~~iA~~L~~hp~V~~V-~yPgL~shp~h~la~~~~~~G~G~~~sf~l~g~~-----  357 (436)
T PRK07812        290 AQG------LETLSLRIERHVANAQRVAEFLAARDDVLSV-NYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGV-----  357 (436)
T ss_pred             HCC------CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCH-----
T ss_conf             736------6838999999999999999999609996689-8989888838899998689997279999980989-----


Q ss_pred             HHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             345678889999988862828726655676----------------------75-0568615888999999999999999
Q gi|254780153|r  322 INSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       322 ~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                       +    ..+.+...|.--..+..+|+..+.                      .. -+|++++    .||++.|++-|+.|
T Consensus       358 -~----~~~~f~~~L~lf~~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~eDLi~DL~qA  428 (436)
T PRK07812        358 -E----AGKAFVNALTLHSHVANIGDVRSLVIHPASTTHAQLTPEEQLATGVTPGLVRLAVG----IEGIDDILADLEAG  428 (436)
T ss_pred             -H----HHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHH
T ss_conf             -9----99999980895501047773661546775456432899999865989495999951----09999999999999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780153|r  379 FYFQKI  384 (391)
Q Consensus       379 ~~~~k~  384 (391)
                      |+..|+
T Consensus       429 L~aa~a  434 (436)
T PRK07812        429 FAAARA  434 (436)
T ss_pred             HHHHHC
T ss_conf             997131


No 137
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.18  E-value=1.7e-07  Score=67.02  Aligned_cols=297  Identities=16%  Similarity=0.078  Sum_probs=169.6

Q ss_pred             HHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCCHHHHHHHHHHC-CCCCCE
Q ss_conf             68999986321036--532898899999999999999968--------8998579997487348999875320-578970
Q gi|254780153|r   25 PGWSLGILEGALLG--RSHRCVLGKERINKAIQLTRKVLE--------VPENYRIAIVPASDTGAVEMALWSL-LGYRGV   93 (391)
Q Consensus        25 p~~v~~~~~~~~l~--~sHRs~~f~~i~~~~~~~l~~l~~--------~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~   93 (391)
                      |..+.+++...+-.  ..||-|+-  -..+.++.|.+.++        ++.  +.+++..|++..+..++.-. ..+++.
T Consensus        40 p~~v~eai~~~~~~~~~~~rYPd~--~~~~Lr~aiA~~~~~~~~~~~~v~~--e~I~vgnGs~eli~~l~~a~~~~~~~~  115 (369)
T PRK02610         40 PTDLKQKLAWLYQQGIASNRYPDG--GHLALKQAIAEYVNESTAGSWQITP--ANISVGNGSDELIRSLLIATCLGGEGS  115 (369)
T ss_pred             CHHHHHHHHHHHHCCHHCCCCCCC--CHHHHHHHHHHHHCCCCCCCCCCCC--CEEEECCCHHHHHHHHHHHHHCCCCCE
T ss_conf             989999999998703120659999--8799999999885755455568981--569984899999999999995489985


Q ss_pred             EEEEECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHC----CC-----CCCEEEEEEECCCCEEECCEEE--E-CC
Q ss_conf             7997073688888765323876306740-577765786767----85-----5657997420242022032035--0-25
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKV----DF-----DRDVVFVWNGTTSGVCVPDVGF--I-PE  160 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~----~~-----~~~v~~~h~ETstGv~~~~~~~--~-~~  160 (391)
                      +++..-+|+..  ..+++..+..+..+. .+.+...+++..    ..     .+.+.++.=..-||...+..++  + ..
T Consensus       116 vl~~~Ptf~~Y--~~~a~~~g~~~~~v~~~~~~f~~d~~~~~~~i~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~l~~~  193 (369)
T PRK02610        116 ILVAEPTFSMY--GILAQTLGIPVVRVGRDPENFEIDLAAAQTAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSL  193 (369)
T ss_pred             EEECCCCHHHH--HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHC
T ss_conf             99678765589--9999975962799457643665698999999985559882399978996972656799999999846


Q ss_pred             CCCCEEEEEECCH-HHHCCC-C-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             6861488640110-110254-5-56857--9997001200176651--54456778887654114457783123200112
Q gi|254780153|r  161 SREGLVICDATSA-VFARHI-D-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       161 ~~~~llivD~vSs-~g~~p~-d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                      ..+.++|+|-.-. |..... + ..+.+  ++.-+.-|.+| -||+  |.++.+++.++...+...              
T Consensus       194 ~~~~~vvvDEaY~ef~~~s~~~~~~~~~NlivlrTfSK~~g-laGlRlGy~ia~~~~i~~l~~~~~--------------  258 (369)
T PRK02610        194 PEDILVVIDEAYFEFSQTTLVPELAQHPNWVILRTFSKAFR-LAAHRVGYAIGHPELIAVLEKVRL--------------  258 (369)
T ss_pred             CCCEEEEECCCEEECCCCCCCHHHHCCCCEEEEECCCHHHC-CCCCCCEECCCCHHHHHHHHHHCC--------------
T ss_conf             99769983367602155532102431787589852634406-766551311179999999998249--------------


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EE
Q ss_conf             32103347864466644889999999986201031899999999779999999874797167668820036531789-82
Q gi|254780153|r  234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KI  312 (391)
Q Consensus       234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~  312 (391)
                                 ++.-+.+...+...+|+.-   .-+....++..+..+.++..+.+.+++..+      -|.+|..+ ++
T Consensus       259 -----------p~~v~~~a~~aa~~aL~~~---~~~~~~~~~~~~eR~~l~~~L~~l~g~~v~------ps~aNFil~~~  318 (369)
T PRK02610        259 -----------PYNLPSFSQAAAQLALEHR---DELLAAIPEILQERDKLYRALQELPQLRVW------PSAANFLFLRL  318 (369)
T ss_pred             -----------CCCCCHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCEEC------CCCCEEEEEEC
T ss_conf             -----------9884899999999997694---999999999999999999999867997789------99860899988


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r  313 VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       313 ~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .++.           ..+.+...|.+.|+.+.     ....++||+++   ++++.+.|+++|+.++.+
T Consensus       319 ~~~~-----------~~~~~~~~L~~~Gi~VR-----~~~~~lRIsvg---t~een~~~l~~Lk~~L~~  368 (369)
T PRK02610        319 QGAQ-----------DLAALHQALKNQGTLVR-----HTAGGLRITIG---TPEENQRTLARLQAALTQ  368 (369)
T ss_pred             CCCC-----------CHHHHHHHHHCCCEEEC-----CCCCEEEEEEC---CHHHHHHHHHHHHHHHHH
T ss_conf             9975-----------69999999982990999-----89990899949---999999999999999961


No 138
>PRK09148 aminotransferase; Validated
Probab=99.18  E-value=1.5e-07  Score=67.37  Aligned_cols=332  Identities=10%  Similarity=0.011  Sum_probs=178.9

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHHHHHH
Q ss_conf             8868887768-968999986321036-5328---9889999999999999996889985--7999748734899987532
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea~~~n   86 (391)
                      .+|+-|=-.. +|..+++++.+.+.. ..|+   +.=..++-+.+-+.+++-+++.-+.  +| +++.|++.++..++..
T Consensus        34 i~L~iG~Pd~~~P~~i~~a~~~a~~~~~~~~Y~~~~G~p~LReaia~~~~~r~g~~~~p~~~I-ivt~Ga~~al~~~~~a  112 (406)
T PRK09148         34 IDLGMGNPDLPTPQHIVDKLCETAGKPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQV-VATLGSKEGFANMAQA  112 (406)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHH
T ss_conf             889898999997899999999997499888789975859999999999999858988988739-9887989999999999


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEE---
Q ss_conf             0578970799707368888876532387630674--0577765786767-----85565799742024202203203---
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVG---  156 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~---  156 (391)
                      ++++||.+++-.=.|....  ...+..+..+..+  ..+.+...++++.     +..+.+.++.=..-||...+..+   
T Consensus       113 l~~pGD~Vli~~P~Yp~y~--~~~~~~g~~~~~v~~~~~~~~~~~le~~~~~~~~ktk~iil~~P~NPTG~v~~~~~l~~  190 (406)
T PRK09148        113 ITAPGDVVLCPNPSYPIHA--FGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKD  190 (406)
T ss_pred             HCCCCCEEEECCCCHHHHH--HHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             6699999998077658789--99998179158605776433330299999745876449997789998887689999999


Q ss_pred             --EECCCCCCEEEEEECCH---HHHCCC------C-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCC
Q ss_conf             --50256861488640110---110254------5-56857999700120017665--1544567788876541144577
Q gi|254780153|r  157 --FIPESREGLVICDATSA---VFARHI------D-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       157 --~~~~~~~~llivD~vSs---~g~~p~------d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~  222 (391)
                        .+|..++.++|.|-+=+   +.+.+.      + ..+.-+.+.|.-|.++ .||  +|.++..++.++++...+.   
T Consensus       191 l~~~a~~~~i~visDEiY~~l~~~~~~~~s~~~~~~~~~~~I~~~s~SK~~~-m~G~RiG~~v~~~~li~~l~~~~~---  266 (406)
T PRK09148        191 LVAFAKKHDIWILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFS-MAGWRMGFAVGNERLIAALTRVKS---  266 (406)
T ss_pred             HHHHHHCCEEEEECCCCHHHHEECCCCCCCHHHCCCHHHHHHHHCCCCHHCC-CCCCCEEEEECCHHHHHHHHHHHH---
T ss_conf             9987540548996342253513788767554317430322111114203036-755335999759999999999997---


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                               +           +-...++..-++...+|+.-.  .-++.+.+.++++.+.+.+.+.+.+ +....++-. 
T Consensus       267 ---------~-----------~~~~~~~~~Q~aa~~aL~~~~--~~~~~~~~~y~~rrd~l~~~L~~~g-~~~~~P~G~-  322 (406)
T PRK09148        267 ---------Y-----------LDYGAFTPIQVAATAALNGPQ--DCIAEMREVYKKRRDVLVESFGRAG-WDIPPPAAS-  322 (406)
T ss_pred             ---------H-----------CCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCEE-
T ss_conf             ---------6-----------437887899999999975967--8999999999999999999888669-764379836-


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             3653178982473101137345678889999988-86282872665-5676750-5686158889999999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                         .-+-+.+++. ....+       ..++...| .+.|+++--|. +...|++ +|++.-.  +.+.++.-++-|+.++
T Consensus       323 ---~y~w~~l~~~-~~~~~-------~~~f~~~Ll~~~gV~v~PG~~Fg~~g~~~iRlsfa~--~~~~L~eal~Rl~~~l  389 (406)
T PRK09148        323 ---MFAWAPIPEA-FRHLG-------SLEFSKLLVEKADVAVAPGVGFGEHGEGYVRIALVE--NEQRIRQAARNIKRFL  389 (406)
T ss_pred             ---EEEEEECCCC-CCCCC-------HHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEECC--CHHHHHHHHHHHHHHH
T ss_conf             ---9999888643-47899-------999999999739999989732188998859999738--8999999999999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999987751
Q gi|254780153|r  380 YFQKISFLRA  389 (391)
Q Consensus       380 ~~~k~~~~~~  389 (391)
                      .+.-+.+..-
T Consensus       390 ~~~~~~~~~~  399 (406)
T PRK09148        390 SSADETLHNV  399 (406)
T ss_pred             HCCHHHHHCC
T ss_conf             7608787376


No 139
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.18  E-value=1.7e-07  Score=67.09  Aligned_cols=321  Identities=14%  Similarity=0.036  Sum_probs=171.6

Q ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHHH
Q ss_conf             999863210365328988999999999999999688998579997487348999875320-5789707997073688888
Q gi|254780153|r   28 SLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGWM  106 (391)
Q Consensus        28 v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~~  106 (391)
                      |.+.+....+..   +    ...++-.+.++++++.+.   ++. ..|||.|.+.++..+ +++||.+++-.-.|-.- +
T Consensus        20 v~~~l~sg~~~~---G----~~v~~FE~~~a~~~g~k~---av~-v~sgT~AL~lal~al~i~~gdeVi~p~~tf~at-~   87 (379)
T PRK11658         20 VKEVLRSGWITT---G----PKNQELEQAFCQLTGNQH---AIA-VSSATAGMHITLMALGIGPGDEVITPSQTWVST-L   87 (379)
T ss_pred             HHHHHHCCCCCC---C----HHHHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHH-H
T ss_conf             999996698678---8----779999999999978694---999-768899999999986988839999899556999-9


Q ss_pred             HHHHHCCCCCEEEEE-CCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCE--EEECCCCCCEEEEEECCHHHHC-
Q ss_conf             765323876306740-5777657867678-----556579974202420220320--3502568614886401101102-
Q gi|254780153|r  107 SDIRQLSLQDVREFT-APYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDV--GFIPESREGLVICDATSAVFAR-  177 (391)
Q Consensus       107 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~--~~~~~~~~~llivD~vSs~g~~-  177 (391)
                      ..+...+ ......+ .+.+...+++.++     ..+.+..||.   -|...+..  ..+|+.++..+|-||..++|+. 
T Consensus        88 ~ai~~~G-a~pvf~Did~~t~~id~~~~e~~it~~tkaIi~Vh~---~G~~~d~~~i~~i~~~~~i~vIEDaA~a~Ga~~  163 (379)
T PRK11658         88 NMIVLLG-ATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVHY---AGAPADLDAIRAIGERYGIPVIEDAAHAVGTYY  163 (379)
T ss_pred             HHHHHCC-CEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECC---CCCCCCHHHHHHHHHHCCCEEEECCHHHHCCCC
T ss_conf             9999819-989974574565354889998654826549998568---898663779999999759818970835536654


Q ss_pred             ---CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC-C-CCCCCCCCCCCHHH
Q ss_conf             ---545568579997001200176651544567788876541144577831232001123210-3-34786446664488
Q gi|254780153|r  178 ---HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME-G-LFCGETINTPSLLC  252 (391)
Q Consensus       178 ---p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~TP~v~~  252 (391)
                         ++--.++.+.-+.+.|+|..--|=.++.=+++..+++......+...+.++......... . ...|. -+-.+-..
T Consensus       164 ~g~~~Gs~g~a~fSF~~~K~ittGeGG~ivtnd~~l~~~~r~lr~hG~~~~~~~~~~~g~~~~~~~~~~G~-N~rm~elq  242 (379)
T PRK11658        164 KGRHIGARGTAIFSFHAIKNITCAEGGLIVTDDEELADRLRMLKFHGLGVDAYDRQTQGRAPQAEVLEPGY-KYNLADIN  242 (379)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEECCC-CCCCCHHH
T ss_conf             79866762445785666667877787499969999999999999779886513443037888622665561-36777787


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf             999999998620103189999999977999999987479716766882003-6531789824731011373456788899
Q gi|254780153|r  253 IEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR-SNTSICMKIVDSDIASLDINSQKSFCKS  331 (391)
Q Consensus       253 i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r-S~~~v~~~~~d~~~~~~~~~~~~~~~~~  331 (391)
                      -.....+|+.      ++.+.++.++.++...+.+...++.....++.... +.-..++.+.... ...+       ...
T Consensus       243 AAigl~qL~~------ld~~~~~R~~ia~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~-------Rd~  308 (379)
T PRK11658        243 AAIALVQLQK------LEALNARRRAIAAQYLQALAALPFQPLSLPAWPHQHAWHLFIIRVDEER-CGIS-------RDA  308 (379)
T ss_pred             HHHHHHHHHH------HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECHHH-CCCC-------HHH
T ss_conf             9999999999------9999999999999999972689986667889887411078999986463-5448-------999


Q ss_pred             HHHHHHHCCEEECCCC--------CCC------C-------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9998886282872665--------567------6-------7505686158889999999999999999
Q gi|254780153|r  332 MLSFLEKEEIAYDIGS--------YRD------A-------PLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       332 ~~~~l~~~g~~~~~~~--------~r~------~-------~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      +...|.++|+..++..        |+.      .       .+.+.+-++..++.+|++..++.|..++
T Consensus       309 l~~~L~~~gI~t~~~y~p~h~~~~~~~~~~~~~lpnae~~~~~~lsLP~~~~Lt~~di~~Ii~~ik~i~  377 (379)
T PRK11658        309 LMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDSDVDRVITALQQIA  377 (379)
T ss_pred             HHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             999999779981202742004898881598789989999984889898998979999999999999997


No 140
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.18  E-value=2.2e-07  Score=66.36  Aligned_cols=299  Identities=18%  Similarity=0.147  Sum_probs=179.1

Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf             68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r   25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG  104 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r  104 (391)
                      |..+.+++....= ..||=|+-  -..+.++.+...++..+...|++.. |++..++.++..++.+|+.+++..-.|+..
T Consensus        37 ~~~~~~~~~~~~~-~~~rYPd~--~~~~l~~a~a~~~~~~~~~~V~~gn-Gsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y  112 (356)
T COG0079          37 PPKVIEAIRAALD-KLNRYPDP--DYRELRAALAEYYGVVDPENVLVGN-GSDELIELLVRAFVEPGDTVLIPEPTFSMY  112 (356)
T ss_pred             CHHHHHHHHHHHH-HHHCCCCC--CHHHHHHHHHHHHCCCCCCEEEEEC-CHHHHHHHHHHHHHCCCCEEEECCCCHHHH
T ss_conf             8999999998788-86429996--1799999999984799802399827-848999999999617898599817880788


Q ss_pred             HHHHHHHCCCCCEEEEECCCCCCCCHHHC----CC-CCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEEC-CHH
Q ss_conf             88765323876306740577765786767----85-5657997420242022032035---025-68614886401-101
Q gi|254780153|r  105 WMSDIRQLSLQDVREFTAPYGSLPDFSKV----DF-DRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDAT-SAV  174 (391)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~-~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~v-Ss~  174 (391)
                        ...++..+..+....... ...+++.+    +. .+.+.+|.=..-||...+..++   +.. ..+.++|||-. -.|
T Consensus       113 --~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF  189 (356)
T COG0079         113 --EIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEF  189 (356)
T ss_pred             --HHHHHHCCCEEEEECCCC-CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf             --999997698699944644-44588999865146888899959959988876999999999838788589997753102


Q ss_pred             HHCCC-CC-CCCE-EEE-ECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf             10254-55-6857-999-7001200176651--54456778887654114457783123200112321033478644666
Q gi|254780153|r  175 FARHI-DF-NKLD-VVT-FSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP  248 (391)
Q Consensus       175 g~~p~-d~-~~iD-v~~-a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP  248 (391)
                      ...+. +. ...+ +++ =+--|.+|. ||+  |+++.+++.++...+...++                         .-
T Consensus       190 ~~~~~~~l~~~~~nlivlRTfSKa~gL-AGlRlGy~ia~~~~i~~l~~vr~p~-------------------------~v  243 (356)
T COG0079         190 SPESSLELLKYPPNLIVLRTFSKAFGL-AGLRVGYAIANPELIAALNKVRPPF-------------------------NV  243 (356)
T ss_pred             CCCHHHHHHCCCCCEEEEECCHHHHCC-CHHCEEEHCCCHHHHHHHHHHCCCC-------------------------CC
T ss_conf             782454552148988999546786402-1133340208999999999830788-------------------------88


Q ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEEEE-CCCCCCCCCHHHHH
Q ss_conf             4488999999998620103189999999977999999987479716-766882003653178982-47310113734567
Q gi|254780153|r  249 SLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE-NLAVDETTRSNTSICMKI-VDSDIASLDINSQK  326 (391)
Q Consensus       249 ~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~-~~~~~~~~rS~~~v~~~~-~d~~~~~~~~~~~~  326 (391)
                      +.....+...+|+.-   .=++...++..+-++.+++++.+.+ +. .+      -|.+|..+.- ++           .
T Consensus       244 ~~~a~~aa~aal~~~---~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~------pS~aNFvlv~~~~-----------~  302 (356)
T COG0079         244 SSPALAAAIAALRDA---DYLEESVERIREERERLYAALKALG-LFGVF------PSQANFVLVRVPD-----------A  302 (356)
T ss_pred             CHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CCCCC------CCCCCEEEEECCC-----------C
T ss_conf             899999999860248---9999999999999999999997379-87015------5888779997586-----------2


Q ss_pred             HHHHHHHHHHHHCCEEECCCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             8889999988862828726655-676750568615888999999999999999999
Q gi|254780153|r  327 SFCKSMLSFLEKEEIAYDIGSY-RDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       327 ~~~~~~~~~l~~~g~~~~~~~~-r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      . ...+.+.|.++|+++.--.. ......+||+.+.   +++-++|+++|..+.+.
T Consensus       303 ~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvgt---~een~~ll~AL~~~~~~  354 (356)
T COG0079         303 E-AAALAEALLKKGILVRDCSSVGLLPGYLRITVGT---PEENDRLLAALREVLKG  354 (356)
T ss_pred             C-HHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCC---HHHHHHHHHHHHHHHHC
T ss_conf             1-9999999987898998577778888759996598---89999999999998731


No 141
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.18  E-value=2.4e-08  Score=72.46  Aligned_cols=307  Identities=15%  Similarity=0.100  Sum_probs=158.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..|=+..   .+ +..+||-+|+.+++++++++|+.+++...-||.-  ++.......+.+++.+
T Consensus        59 gNPT~~~lE~~l---a~LEgg~---~a-~~~sSGmaAi~~~ll~ll~~Gd~iv~~~~~YGgT~~l~~~~l~~~GI~v~~v  131 (432)
T PRK06702         59 GNPTLAAFEQKL---AELEGGV---GA-VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFF  131 (432)
T ss_pred             CCHHHHHHHHHH---HHHHCCC---CE-EEECHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHEECCCEEEEEE
T ss_conf             986799999999---9983998---28-9853289999999999628999899848871217999864020288799987


Q ss_pred             ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             05777657867678--5565799742024202203---203--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +...    +.+++.  ......+++.||.+--...   +..  .+++++++++|||-+  +-+...|++. ++|+++-|.
T Consensus       132 d~~~----~~~~~~~~~~~~Tkli~~EtpsNP~l~v~Di~~ia~iA~~~gi~~vVDNTfatP~~~rPl~~-GaDiVvhS~  206 (432)
T PRK06702        132 NPNL----TADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEH-GANIIVHST  206 (432)
T ss_pred             CCCC----CHHHHHHHCCCCCEEEEEEECCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHC-CCCEEEEEC
T ss_conf             8999----99999974578750899972799973202799999999766981896357643010462012-898999853


Q ss_pred             HHCCCCCCC--CEEEEECHH-HHH--HHHHCCCCCCCCCHHHCCHH---------HHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             120017665--154456778-887--65411445778312320011---------2321033478644666448899999
Q gi|254780153|r  192 QKVLGGEAG--FGIIILSPA-SVE--RLEKYVPSWPLPKIFRMVKG---------GRVMEGLFCGETINTPSLLCIEDYI  257 (391)
Q Consensus       192 QK~l~~ppG--l~~v~~s~~-al~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~TP~v~~i~al~  257 (391)
                      -|-|+|-.-  .|+|+.+.+ -|.  |-.....+.+...-+.|...         .+.......|.   +++=+.-|.+.
T Consensus       207 TKyi~GHsD~lgG~vv~~g~~~w~~~~~p~l~~p~~~~~~~~~~~~~g~~~~~~~~r~~~~r~~G~---~lsP~~a~L~l  283 (432)
T PRK06702        207 TKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGN---CMSPFNAYISN  283 (432)
T ss_pred             CCCCCCCCCEEEEEEEECCCCCHHCCCCHHHCCCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCC---CCCCHHHHHHH
T ss_conf             421568875033599715754110142787608835540207887413778999999999885266---67822568987


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCC------C--C-CCCEEEEEECCCCCCCCCHH
Q ss_conf             99986201031899999999779999999874797167-----668820------0--3-65317898247310113734
Q gi|254780153|r  258 DALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-----LAVDET------T--R-SNTSICMKIVDSDIASLDIN  323 (391)
Q Consensus       258 ~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-----~~~~~~------~--r-S~~~v~~~~~d~~~~~~~~~  323 (391)
                      .      --..+.-|.+||.+++..+-+|+++++....     +...|.      +  + ....++|.+....      +
T Consensus       284 r------GL~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~shp~~~la~k~~~~G~ggmlsf~l~g~~------e  351 (432)
T PRK06702        284 I------GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGL------E  351 (432)
T ss_pred             C------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH------H
T ss_conf             2------789799999999999999999986299965797999988806889999727997069999945989------9


Q ss_pred             HHHHHHHHHHHHHHHCCEEECCCCCCC------------C----------C-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             567888999998886282872665567------------6----------7-5056861588899999999999999999
Q gi|254780153|r  324 SQKSFCKSMLSFLEKEEIAYDIGSYRD------------A----------P-LGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       324 ~~~~~~~~~~~~l~~~g~~~~~~~~r~------------~----------~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      ..    +.+...|.-...+..+|+.++            .          . .-+|++++=    ||++.|++-||.|+.
T Consensus       352 ~~----~~f~~~l~l~~~a~slGg~~Sli~hPas~th~~~~~e~r~~~Gi~~~lvRlSVGl----Ed~eDLi~DL~qAL~  423 (432)
T PRK06702        352 AA----KEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----EDVSDIIADLEAALV  423 (432)
T ss_pred             HH----HHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHH
T ss_conf             99----9999828817352466876520037451436438999998659893969997523----999999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  381 FQKI  384 (391)
Q Consensus       381 ~~k~  384 (391)
                      ..|.
T Consensus       424 ~~~~  427 (432)
T PRK06702        424 GGKQ  427 (432)
T ss_pred             HHHH
T ss_conf             8786


No 142
>PRK08443 consensus
Probab=99.17  E-value=4.8e-07  Score=64.19  Aligned_cols=312  Identities=10%  Similarity=-0.009  Sum_probs=162.9

Q ss_pred             HHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             6899998632103----65328988999999999999999688998-579997487348999875320578970799707
Q gi|254780153|r   25 PGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE   99 (391)
Q Consensus        25 p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g   99 (391)
                      |..+.+++.+.+-    +++. +.-..++-+.+.+.+++-++.+=+ -+|+ ++.|++.++..++.-++++||.+++..=
T Consensus        44 p~~i~~a~~~a~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~~~pe~I~-it~G~~~al~~~~~al~~pGD~Vlv~~P  121 (388)
T PRK08443         44 PQAIKDAAIKAIEKGFTKYTA-VAGIPELLKAIATKLKKDNNLDYETNEII-TSNGAKHSLFNVFQALIEKGDEVIIPSP  121 (388)
T ss_pred             CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEE-ECCCHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf             999999999998559998899-98879999999999999858998831299-8688799999999998099998998268


Q ss_pred             CHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEE
Q ss_conf             3688888765323876306740--57776578676785-----5657997420242022032035-----0256861488
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVI  167 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~lli  167 (391)
                      .|..- ...+...+ ..+..+.  ...+...++++++.     .+.+.++.=..-||...+..+.     +|..++.++|
T Consensus       122 ~Y~~y-~~~~~~~g-~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii  199 (388)
T PRK08443        122 YWVTY-PELVKYSG-GVPVFIETDEENGFKITAEQLKKAITPKTKVLVLNTPSNPTGSVYSKEELEAIAKVLKGTDIWVL  199 (388)
T ss_pred             CCCCH-HHHHHHHC-CEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
T ss_conf             74423-99999808-84799865543486779999997478787399986898998847644789999998623575674


Q ss_pred             EEECCHH---HHCC-----C--CCCCCEEEEECCHHCCCCCCCCEE--EEECHHHH-HHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             6401101---1025-----4--556857999700120017665154--45677888-76541144577831232001123
Q gi|254780153|r  168 CDATSAV---FARH-----I--DFNKLDVVTFSAQKVLGGEAGFGI--IILSPASV-ERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       168 vD~vSs~---g~~p-----~--d~~~iDv~~a~sQK~l~~ppGl~~--v~~s~~al-~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      .|-+=+-   .+..     +  |..+--+.+.|.-|.++ -||+-+  ++..++.+ +.....+                
T Consensus       200 ~DE~Y~~l~~~~~~~~~~~~~~~~~~~~I~i~S~SK~~~-~~G~RiG~~~~p~~~l~~~~~~~~----------------  262 (388)
T PRK08443        200 SDEMYEKLVYDGEFVSVASVSEDMFKRTITINGLSKSVA-MTGWRFGYMASKNKKLIKAMKKLQ----------------  262 (388)
T ss_pred             CCHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHCC-CCCCCEEEEEECCHHHHHHHHHHH----------------
T ss_conf             220124322699878889972224467899803432005-865146999818699999999997----------------


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                             .++...++...-++...+++.- .+.-++.+.+.++++.+.+.+.+++..++....++    +..-+-+.+++
T Consensus       263 -------~~~~~~~~~~~q~aa~~al~~~-~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~P~----g~~~~w~~~~~  330 (388)
T PRK08443        263 -------SQSTSNINSITQKAAIPALNGE-CDKDIEKMRQAFEKRRDLAVDAINAIPGLSVYKPD----GAFYLFVNIKK  330 (388)
T ss_pred             -------HHCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC----EEEEEEEECCC
T ss_conf             -------4467870179999999998545-24789999999999999999998747896761688----34799788888


Q ss_pred             CCCCCCCHHHHHHHHHHHH-HHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             3101137345678889999-988862828726655676750568615888999999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSML-SFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      ...   +   .    ..+. ..+.+.|+++--|..=....-+|++..  .+++.++.-++-|..+.++
T Consensus       331 ~~~---d---~----~~f~~~ll~~~gV~v~PG~~Fg~~g~vRl~~~--~~~e~l~ea~~RL~~~l~~  386 (388)
T PRK08443        331 IEK---D---S----MKFCKKLLEQEGVAVVPGIGFGMEGYFRLSFA--TSIESIKKGIERIANFVKS  386 (388)
T ss_pred             CCC---C---H----HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf             899---9---9----99999999819999972743588985999982--8899999999999999996


No 143
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.17  E-value=1.2e-07  Score=67.95  Aligned_cols=305  Identities=17%  Similarity=0.172  Sum_probs=174.4

Q ss_pred             CCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf             868887768-9689999863210365328988999999999999999688998579997487348999875320578970
Q gi|254780153|r   15 FFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV   93 (391)
Q Consensus        15 ~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~   93 (391)
                      .|+.+=.+. +|..+++++...+- ..+|=|+-.  ..+.++.+.+.++++.+ .|++ +.|++.++..++..++++|+.
T Consensus        33 ~ls~Nenp~g~~~~v~~a~~~~~~-~~~~YPd~~--~~~Lr~~iA~~~gv~~~-~I~v-~nGs~e~i~~~~~~~~~~g~~  107 (359)
T PRK03158         33 KLASNENPFGCSPRVTEALASEAS-QYALYPDGY--AFELRTKVAKHLGVKEE-QLIF-GNGSDEVIQIISRALLHEGTN  107 (359)
T ss_pred             EEECCCCCCCCCHHHHHHHHHHHH-HCCCCCCCC--HHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCE
T ss_conf             950899999999999999998787-367696988--89999999998684867-7998-478899999999998079981


Q ss_pred             EEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCCC-CCEEEEEEECCCCEEECCEEE---ECC-CCCC
Q ss_conf             799707368888876532387630674057776578676----7855-657997420242022032035---025-6861
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDFD-RDVVFVWNGTTSGVCVPDVGF---IPE-SREG  164 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~-~~v~~~h~ETstGv~~~~~~~---~~~-~~~~  164 (391)
                      +++..=+|+..  ...++..+..+..+....+ ..+++.    ++.. +.+.++.=..-||...+..+.   +.. ..+.
T Consensus       108 vvi~~P~f~~Y--~~~a~~~g~~~~~vpl~d~-~~dl~~~~~~i~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~  184 (359)
T PRK03158        108 TVMANPTFSQY--RHNAVIEGAEVREVPLKDG-IHDLDAMLEAIDENTKIVWICNPNNPTGTYVEKQKLLAFLEKVPKSV  184 (359)
T ss_pred             EECCCCEEEHH--HHHHHHCCCEEEEECCCCC-CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCE
T ss_conf             11379820555--9999762853799626777-66999999750758878997489999888765234899997485772


Q ss_pred             EEEEEECC-HHHHC-C----CC-CCCC-E-EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             48864011-01102-5----45-5685-7-9997001200176651--54456778887654114457783123200112
Q gi|254780153|r  165 LVICDATS-AVFAR-H----ID-FNKL-D-VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       165 llivD~vS-s~g~~-p----~d-~~~i-D-v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                      ++|+|-.- .|... +    +. ..+. . +++-+--|.++ -||+  |.++.+++.+++......              
T Consensus       185 ~vvvDEaY~ef~~~~~~~~~~~l~~~~~nviv~rsfSK~~~-laGlRlGy~ia~~~li~~l~~~~~--------------  249 (359)
T PRK03158        185 LVVLDEAYYEYVTAEDYPQTLPLLEKYENLMILRTFSKAYG-LAALRVGYGIADEELIGQLEPARL--------------  249 (359)
T ss_pred             EEEEEHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCCHHCC-CCCCCCEECCCCHHHHHHHHHHCC--------------
T ss_conf             99972278887325786203567653256236515654106-888852203189999999998538--------------


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             32103347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r  234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV  313 (391)
Q Consensus       234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~  313 (391)
                                 +++-+.....+...+|+   .+.=++...++.++..+.+++.++..+ +..+.      |.++..+.  
T Consensus       250 -----------~~~v~~~aq~aa~aal~---d~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~p------s~anF~l~--  306 (359)
T PRK03158        250 -----------PFNTSTIAQAAALAALE---DQAFIQECVKKNAEGLKQYYAFCKEYG-VFYYP------SQTNFVLI--  306 (359)
T ss_pred             -----------CCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC------CCCCEEEE--
T ss_conf             -----------86856999999999957---999999999999999999999998688-88999------98508998--


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             73101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r  314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      +-.   .+       ...+...|.++|+++.-+..-..+..+||+.+   ++++.++|+++|+..
T Consensus       307 ~~~---~~-------~~~~~~~L~~~gi~Vr~g~~fg~~~~iRIsvg---t~~en~~ll~aL~~i  358 (359)
T PRK03158        307 DLG---IP-------GDEVFEYLLKKGYIVRSGAALGFPTGIRITVG---LKEENDEIIELLAEL  358 (359)
T ss_pred             ECC---CC-------HHHHHHHHHHCCEEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHH
T ss_conf             689---99-------99999999819939996898999898999948---999999999999986


No 144
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.17  E-value=2.2e-07  Score=66.35  Aligned_cols=325  Identities=11%  Similarity=0.061  Sum_probs=168.2

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECC
Q ss_conf             968999986321036532898899-99999999999996889985799974873489998753205--789707997073
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~  100 (391)
                      +|+ |.+++.+++-..+|-+..|. +...+.-++|.+++.-+ -.+| |+..||+.++|+++.=.-  ..+..++...++
T Consensus        90 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~lA~~L~~~~p~~-l~~v-~f~~SGSEAvE~AiKlAr~~tgr~kiIs~~~s  166 (460)
T PRK06082         90 HPH-VIKKVTEQIAKLPFSPRRFTNETAIECAEKLTEICGGE-LNRV-LFAPGGTSVIGMALKLARHITGNYKVVSLWDS  166 (460)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCEE-EECCCHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf             999-99999999975888765526889999999999857877-6979-84396589999999999885288648996078


Q ss_pred             HHHHHHHHHHHCCC-----------CCEEEEECCCC--------CCCC------HH-HCCCCCCEEEEEEECCC--CEEE
Q ss_conf             68888876532387-----------63067405777--------6578------67-67855657997420242--0220
Q gi|254780153|r  101 FGLGWMSDIRQLSL-----------QDVREFTAPYG--------SLPD------FS-KVDFDRDVVFVWNGTTS--GVCV  152 (391)
Q Consensus       101 ~~~r~~~~~~~~~~-----------~~~~~~~~~~g--------~~~~------~~-~~~~~~~v~~~h~ETst--Gv~~  152 (391)
                      |-++....+.--+.           ..+..+..+..        ...+      ++ .++....++.+-.|...  |+..
T Consensus       167 yHG~T~~als~~g~~~~r~~~~pl~~g~~~vp~p~~~~~~~~~~~~~~~~~~~~le~~ie~~g~iAA~i~EPi~~~g~~~  246 (460)
T PRK06082        167 FHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPRADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQV  246 (460)
T ss_pred             CCCCCHHHHHCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf             67762666550495433368889899975479863236666764311289999999986057978999961666788806


Q ss_pred             CC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCC
Q ss_conf             32------035025686148864011011025---4--5568579997001200176-6515445677888765411445
Q gi|254780153|r  153 PD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPS  220 (391)
Q Consensus       153 ~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~  220 (391)
                      |.      ...+|+++++|+|+|=|.+=.++-   +  +.+++.-.+....|+|++= .=++.++.+++....      .
T Consensus       247 P~~~yl~~lr~lc~~~giLlI~DEVqtGfGRTG~~fa~e~~gv~PDIv~~gKglggG~~Pisav~~~~~~~~~------~  320 (460)
T PRK06082        247 PSKAYWKRIREICDKHNVLLIIDDIPNGMGRSGEWFTHQAFDIEPDILCIGKGLGGGLVPIAAMITKDKYNTA------A  320 (460)
T ss_pred             CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEECHHHHCCCCCEEEEEEHHHHHHH------C
T ss_conf             8989999999999972985760332028875443446631799982899881643897763899874885520------1


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE  300 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~  300 (391)
                      .       .         ...++|+.--|+ ...+..++|+.+++++    ..++.+++.+.+.+.+..+..-.+.+.+-
T Consensus       321 ~-------~---------~~g~~T~~gnPl-~cAaAlA~L~iie~e~----l~~~a~~~G~~l~~~L~~L~~~~p~VgdV  379 (460)
T PRK06082        321 Q-------I---------SLGHYTHEKSPI-GCAAALATMEAIEQEG----LLDKVKADSQFMREKLLEMKAKYPVIGDV  379 (460)
T ss_pred             C-------C---------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             5-------7---------765436789879-9999999999997257----88999999999999999998629978852


Q ss_pred             CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             00365317898247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r  301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      .-+..+...-.+.|+.......+.    .+.+...+.++|+.+...    .++.+|+.--=.++.++++.+++.|+.++.
T Consensus       380 RG~GLm~giElv~d~~tk~~~~~~----a~~v~~~~~~~Gl~~~~~----~gnvirl~PPL~It~~eid~~l~~l~~al~  451 (460)
T PRK06082        380 RGIGLLWGIELVTDHETKTRAYDE----AEAVLYQCLNNGLSFKVS----QGNVIQLSPPLIISREQLTEALAIFEEAIA  451 (460)
T ss_pred             CCCCEEEEEEEECCCCCCCCCHHH----HHHHHHHHHHCCCEEECC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             336549999974177656566799----999999999689179108----999899979911899999999999999999


Q ss_pred             HHHHHH
Q ss_conf             999987
Q gi|254780153|r  381 FQKISF  386 (391)
Q Consensus       381 ~~k~~~  386 (391)
                      +....+
T Consensus       452 ev~~~~  457 (460)
T PRK06082        452 KVCKDF  457 (460)
T ss_pred             HHHHHH
T ss_conf             999865


No 145
>PRK07367 consensus
Probab=99.17  E-value=1.3e-07  Score=67.72  Aligned_cols=310  Identities=9%  Similarity=-0.006  Sum_probs=161.8

Q ss_pred             HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             689999863210----3653289889999999999999996889985-79997487348999875320578970799707
Q gi|254780153|r   25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENY-RIAIVPASDTGAVEMALWSLLGYRGVDVLAWE   99 (391)
Q Consensus        25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y-~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g   99 (391)
                      |..+++++.+.+    .++++ +.-..++-+.+.+.+++-++.+-+- +|++ +.|++.++..++..++++||.+++.+=
T Consensus        43 p~~i~~a~~~~~~~~~~~Y~~-~~G~~~lR~aia~~~~~~~g~~~~~d~I~i-t~G~~~al~~~~~~l~~pGD~Vlv~~P  120 (385)
T PRK07367         43 PAHIKAAAKKALDEGKTRYGP-AAGEPALREAIAHKLRRENGLDYQAENILV-TNGGKQSLYNLMMALIDPGDEVIIPAP  120 (385)
T ss_pred             CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEEE-CCCHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf             899999999998658877799-999899999999999998589998504999-089899999999997489998999069


Q ss_pred             CHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEE
Q ss_conf             3688888765323876306740--57776578676785-----565799742024202203203-----50256861488
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVI  167 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~lli  167 (391)
                      .|..- ...+...+ ..+..+.  ...|...++++++.     .+.+.+++-..-||...+..+     .+|.+++.++|
T Consensus       121 ~y~~y-~~~~~~~g-~~~v~v~~~~~~~~~~d~~~l~~~~~~~~k~~il~~P~NPTG~v~s~~~l~~l~~~a~~~~~~iI  198 (385)
T PRK07367        121 YWLSY-PEMVKLAG-GTPVIVPTDAATGFKITPEQLRQAITPKTKLLVLNSPSNPTGMVYTPEEIAALAEVIVEHDLYVV  198 (385)
T ss_pred             CCCCC-HHHHHHCC-CEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
T ss_conf             87771-99999809-85799213621276779999997378677499978997987856657888899888875586997


Q ss_pred             EEECCH---HHHCC-CC-----CCCC--EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             640110---11025-45-----5685--7999700120017665--1544567788876541144577831232001123
Q gi|254780153|r  168 CDATSA---VFARH-ID-----FNKL--DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       168 vD~vSs---~g~~p-~d-----~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      .|-+=+   +.+.+ ..     .+..  -+++.|.-|.++ .||  +|.++..++.+++....+.               
T Consensus       199 sDEiY~~l~f~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~~~~~~~~i~~~~~~~~---------------  262 (385)
T PRK07367        199 SDEIYEKILYDGAEHLSIGSLGPEIFQRTIISNGFAKAYS-MTGWRVGYLAGPVELIKAASSIQS---------------  262 (385)
T ss_pred             ECCCCHHHCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCCC-CCCCEEEEEECCHHHHHHHHHHHH---------------
T ss_conf             1132112105897777888859420246401001000367-761248878568999999998542---------------


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                             ..+.++ ++..-++...+|+.-  +.-++.+.+.++++.+.+++.+...+++....  |+  +..-+-+.+++
T Consensus       263 -------~~~~~~-~~~~q~aa~~al~~~--~~~~~~~~~~~~~rr~~l~~~l~~~~~~~~~~--P~--G~~~~w~~l~~  328 (385)
T PRK07367        263 -------HSTSNV-CTFAQYGAIAALESP--QDCVEEMRQAFAERRQLMLDGLNAIPGLSCPK--PE--GAFYVFVDISK  328 (385)
T ss_pred             -------HCCCCC-CHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC--CC--EEEEEEEECCC
T ss_conf             -------055545-789999999999584--98999999999999999999998379967558--88--47999788899


Q ss_pred             CCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             31011373456788899999-8886282872665567675056861588899999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      ...   +       ..++.. ++.+.|+++--|..=.....||++..  .+++.++.-++.|+.+.+
T Consensus       329 ~~~---~-------~~~~~~~ll~~~gV~v~PG~~Fg~~~~~Rl~~a--~~~~~l~ea~~RL~~~l~  383 (385)
T PRK07367        329 TGL---G-------SLEFCRQLLEEHHVAAIPGIAFGADDHIRLSYA--TDLATIEKGLERLERFVR  383 (385)
T ss_pred             CCC---C-------HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf             899---9-------999999999969999975874699993999970--989999999999999998


No 146
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.17  E-value=1.8e-09  Score=79.66  Aligned_cols=238  Identities=15%  Similarity=0.081  Sum_probs=142.6

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             88776896899998632103653289889999999999999996889985799974873489998753205789707997
Q gi|254780153|r   18 SGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        18 pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      .||+   |+ ++++|.....|  |-..-=....++..+.++++|+.+.   .+|++ |||++...++..++++++.+++.
T Consensus         8 t~~t---~~-m~~a~~~a~~G--dd~Yg~D~t~~~le~~~a~l~G~ea---alfv~-sGT~AN~ial~~~~~~g~~vi~~   77 (288)
T pfam01212         8 TGPT---PA-MREAMAAAMVG--DEVYGGDPTVNRLEDRVAELFGKEA---ALFVP-SGTMANQLALMAHCRRGDEVICG   77 (288)
T ss_pred             CCCC---HH-HHHHHHHCCCC--CCCCCCCHHHHHHHHHHHHHHCCCE---EEECC-CCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             8899---99-99999823357--7322679899999999999869982---99868-86799999999838899889983


Q ss_pred             ECCHHH-HHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC---------CCEEEEEEECC----CCEEECCEE-----EE
Q ss_conf             073688-888765323876306740577765786767855---------65799742024----202203203-----50
Q gi|254780153|r   98 WESFGL-GWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD---------RDVVFVWNGTT----SGVCVPDVG-----FI  158 (391)
Q Consensus        98 ~g~~~~-r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~v~~~h~ETs----tGv~~~~~~-----~~  158 (391)
                      ....-. .-..-...+.+.....+..+..-..++++++..         ....++..|.+    -|...+..+     .+
T Consensus        78 ~~sHi~~~E~ga~~~~~G~~~~~l~~~~~G~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG~~~~~~el~~i~~~  157 (288)
T pfam01212        78 EPAHIYFDETGGHAELGGAQPVPLPGAEAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAI  157 (288)
T ss_pred             CCCCCEEECCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHH
T ss_conf             57676545677799982982584478778982999999987644985467654799995544889665578999999999


Q ss_pred             CCCCCCEEEEEE------CCHHHHCCCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             256861488640------11011025455-68579997001200176651544567788876541144577831232001
Q gi|254780153|r  159 PESREGLVICDA------TSAVFARHIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       159 ~~~~~~llivD~------vSs~g~~p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      |++++..+.+|+      +.+.+..+-++ ..+|.++.|.-|++++|-| ++++.+++.+++......            
T Consensus       158 a~~~gl~lHmDGARl~nA~~a~~~~~~e~~~~~D~v~~~~sK~lga~~G-avl~g~~~~i~~a~~~rk------------  224 (288)
T pfam01212       158 AREHGIPLHLDGARLANAAVALGVIVKEITSYADSVSMSLSKGLGAPVG-SVLAGSDDFIAYAIRQRK------------  224 (288)
T ss_pred             HHHCCCEEEEHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCEE-EEEEECHHHHHHHHHHHH------------
T ss_conf             9980993763087898888760999889854688899984357886100-389828999999999999------------


Q ss_pred             HHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             123210334786446--6644889999999986201031899999999779999999874797167
Q gi|254780153|r  232 GGRVMEGLFCGETIN--TPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN  295 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~--TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~  295 (391)
                      ..       -+.++.  -++...+++|        +. ++.. .++..++++.+.+.++..++...
T Consensus       225 ~l-------Gg~mrq~g~~aaa~~~aL--------~~-~~~~-l~~dh~~A~~La~~l~~~~~~~~  273 (288)
T pfam01212       225 YL-------GGGMRQAGVLAAAGLRAL--------EE-GVAR-LGRDHATARRLAEGLELLRGVIP  273 (288)
T ss_pred             HH-------HCCHHHHHHHHHHHHHHH--------HH-CHHH-HHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             97-------264256679999999999--------80-8988-88889999999999976899322


No 147
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.17  E-value=3.5e-08  Score=71.43  Aligned_cols=285  Identities=19%  Similarity=0.137  Sum_probs=158.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+=+..    -.+..+||-+|..+++++++++|+.+++...-||.-  .........+..++..
T Consensus        71 ~NPT~~~lE~~l---a~LEgg~----~a~~~sSGMaAi~~~ll~ll~~Gd~iv~~~~~YGgT~~l~~~~l~~~GI~~~~v  143 (406)
T PRK07810         71 GNPTVSMFEERL---RLIEGAP----ACFATASGMAAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV  143 (406)
T ss_pred             CCHHHHHHHHHH---HHHCCCC----EEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             886289999999---9970998----599843899999999999728999899837986377999997764487499996


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEE---CCEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--56579974202420220---3203--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCV---PDVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~---~~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     ++++++.  .....+++.||.+--..   ++..  .+++.+++++|||-+  +-+...|++ .+.|+++-|.
T Consensus       144 d~~-----d~~~~~~ai~~~Tk~v~~EtpsNP~l~v~Di~aia~iA~~~g~~~vVDNTfaTP~~~rPl~-~GADiVvhS~  217 (406)
T PRK07810        144 DGD-----DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFP-LGVDVVVYSG  217 (406)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH-CCCCEEEEEC
T ss_conf             898-----8599997558886289984489998561167999999997498599978877755358421-2898899953


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-|+|-.-+  |.|+.+++.++...              ....     ...|.   +++-+..|.+...|      ..+
T Consensus       218 TKyi~GHsd~lgG~v~~~~~~~~~~~--------------~~~~-----~~~G~---~lsP~~a~l~lrGL------~TL  269 (406)
T PRK07810        218 TKHIDGQGRVLGGAILGDREYIDGPV--------------QKLM-----RHTGP---ALSAFNAWTLLKGL------ETL  269 (406)
T ss_pred             CCCCCCCCCEECCEEECCHHHHHHHH--------------HHHH-----HHCCC---CCCHHHHHHHHCCC------CCH
T ss_conf             53236887603636952678889999--------------9999-----97389---89878889987068------979


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------------CC-CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999779999999874797167668820-------------03-65317898247310113734567888999998
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDET-------------TR-SNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~-------------~r-S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      .-|.+||.+++..+-+|+++++..... ..|.             .+ ....+.|.+......      .....-.+...
T Consensus       270 ~lRm~r~~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~h~la~r~~~g~G~~~sf~l~~~~~~------~~~~~~~~~~~  342 (406)
T PRK07810        270 AIRVQHSNASALRIAEFLEGHPAVRWV-RYPYLPSHPQYDLAKRQMSGGGTVVTFELDAPEDA------AKQRAFEVLDK  342 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHH------HHHHHHHHHHH
T ss_conf             999999999999999999739981379-80578778177899844789986328998036178------89999999982


Q ss_pred             HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676----------------------75-05686158889999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      |.--..+..+|+.++.                      .. -+|++++    .||++.|++-||.|+
T Consensus       343 l~l~~~a~slGg~~SLi~~Pas~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~~DLi~DL~qAL  405 (406)
T PRK07810        343 LRLIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRISVG----LEDTDDLIADLDRAL  405 (406)
T ss_pred             CCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHC
T ss_conf             872435335676660466775356510799899866979495999932----199999999999754


No 148
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.17  E-value=6e-07  Score=63.57  Aligned_cols=326  Identities=12%  Similarity=0.044  Sum_probs=183.1

Q ss_pred             CCCCCCC-CCCCHHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCC-C-CEEEEECCCCHHHHHHHHHHC
Q ss_conf             8868887-768968999986321036-532898--899999999999999968899-8-579997487348999875320
Q gi|254780153|r   14 PFFSSGP-CAKRPGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPE-N-YRIAIVPASDTGAVEMALWSL   87 (391)
Q Consensus        14 ~~F~pGP-~~~~p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~-~-y~v~~l~GsgT~~~ea~~~nl   87 (391)
                      +||+-|= ---+|..+.+++...+.. ..|..+  =..++-+.+-+.+++-+++.+ | -..++++.|++.++..++.-+
T Consensus        47 I~L~iGePDf~tP~~i~~a~~~a~~~~~~~y~~~~G~~eLReaIa~~~~~~~gv~~~dp~~eIivt~Ga~~al~~~~~al  126 (411)
T PRK06290         47 IDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQELKEAAARYMEKVYGVKDLDPVTEVIHSIGSKPALAYLPSCF  126 (411)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf             77899899998799999999999837998888987649999999999999719987897767998988899999999996


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE----
Q ss_conf             578970799707368888876532387630674--057776578676785-----565799742024202203203----
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG----  156 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~----  156 (391)
                      +++||.+++-.=+|-..  ..+.+..+..+..+  ..+.+..+++++++.     .+.+.++.=..-||...+...    
T Consensus       127 l~pGDeVli~~P~yp~Y--~~~~~~~G~~~v~vp~~~e~~~~~d~~~l~~~i~~ktK~iilnsP~NPTG~v~s~e~l~~i  204 (411)
T PRK06290        127 INPGDVTLMTVPGYPVT--ATHTKWYGGEVYNLPLLEENNFLPDLDAIPKDVLEKAKLLYLNYPNNPTGAVATKEFYKEV  204 (411)
T ss_pred             CCCCCEEEECCCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCEEECHHHHHHH
T ss_conf             69999899868873658--9999984998999865666787659577198625576599988999998614248999999


Q ss_pred             -EECCCCCCEEEEEECCHHH---HCCCC------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf             -5025686148864011011---02545------56857999700120017665--154456778887654114457783
Q gi|254780153|r  157 -FIPESREGLVICDATSAVF---ARHID------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLP  224 (391)
Q Consensus       157 -~~~~~~~~llivD~vSs~g---~~p~d------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~  224 (391)
                       .+|..++.++|.|-+=+-.   ..|+.      ....-+.+.|.-|.++ .||  +|.++..++.++.....+.     
T Consensus       205 ~~~a~~~~i~vIsDEiY~~l~yd~~~~s~~s~~~~~~~~I~i~S~SK~~~-mtGwRiG~~i~~~~li~~~~~i~~-----  278 (411)
T PRK06290        205 VDFAFENDIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSFSKAYN-MTGWRLAFVAGNELIVKAFAAVKD-----  278 (411)
T ss_pred             HHHHHHCCCEEECHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCCCCC-CCEEEEEEEECCHHHHHHHHHHHH-----
T ss_conf             99986428776423535551008977761025677441799825774678-722458988669999999999997-----


Q ss_pred             CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             12320011232103347864466644889999999986201031899999999779999999874797167668820036
Q gi|254780153|r  225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS  304 (391)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS  304 (391)
                                        ++....++..=++...+|+.-   .-++.+.+.++++.+.+.+.+...+ +....++    +
T Consensus       279 ------------------~~~~~~~~~~Q~aa~~aL~~~---~~~~~~~~~y~~rrd~l~~~L~~~G-~~~~~P~----G  332 (411)
T PRK06290        279 ------------------NTDSGQFIAIQKAGIYCLRHP---EITEKTRAKYERRLDKMVKILKEVG-FNAKMPG----G  332 (411)
T ss_pred             ------------------HCCCCCHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC----E
T ss_conf             ------------------464761499999999995598---9999999999999999999999779-8506887----5


Q ss_pred             CCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             531789824731011373456788899999-88862828726655676750568615888999999999999999999
Q gi|254780153|r  305 NTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      ..-+-+.+++...........    .++.. +|.+.++++--|  ...|.-+|++.-  .+.++++..++.|+.+-++
T Consensus       333 afY~~~~ip~~~~~~~~~~~~----~efa~~LLee~~VavvPG--~~fG~yvRis~~--~~~e~leea~~rl~~~~~~  402 (411)
T PRK06290        333 TFYLYVKAPKGTKSGIKFANA----EEFSQYLIKEKLISTVPW--DDAGHFLRMSVT--FEAKSIEEEDRILNEVKRR  402 (411)
T ss_pred             EEEEEEECCCCCCCCCCCCCH----HHHHHHHHHHCCEEEECC--CCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf             369968787766577766899----999999998489999565--515355999983--8899999999999999998


No 149
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.17  E-value=4.6e-08  Score=70.66  Aligned_cols=283  Identities=16%  Similarity=0.151  Sum_probs=167.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++   .|..+-+...   + ++.+||-+|+.+++++++++||.+++....||.  ++.+...+..+..+...
T Consensus        59 ~nPT~~~le~---~la~LEgg~~---a-~~~sSGmaAi~~~ll~~l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gI~~~~~  131 (386)
T PRK06767         59 GNPTVKLFEE---RMAVLEGGEE---A-LAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFC  131 (386)
T ss_pred             CCHHHHHHHH---HHHHHHCCCE---E-EEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf             8867999999---9999849971---6-8852789999999973079999899837982234669999888737589996


Q ss_pred             ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             05777657867678--5565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.++++  ..+...+++.||.+--...+..     .+++++++++|||-+  +-+...|++. ++|+++-|.
T Consensus       132 d~~-----~~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atP~~~~Pl~~-GaDivihS~  205 (386)
T PRK06767        132 DME-----TEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLEL-GCDAVVHSA  205 (386)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC-CCCEEEEEC
T ss_conf             898-----88999975688825999977999876712799999986006734997457642200154436-797899714


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-++|-..+  |.++.+.+.+.+...           .+.        ...|.   +++-+..|.+...|      ..+
T Consensus       206 TKYi~GHsD~l~G~vv~~~~~~~~~~~-----------~~~--------~~~G~---~~sp~~a~l~~rGl------~TL  257 (386)
T PRK06767        206 TKYIGGHGDVVAGVTICKTRALAEKIR-----------PMR--------KDIGG---IMAPFDAWLLLRGL------KTL  257 (386)
T ss_pred             CCCCCCCCCCEEEEEEECHHHHHHHHH-----------HHH--------HHCCC---CCCCHHHHHHHCCC------CCH
T ss_conf             640047766031388616799999999-----------999--------84178---78934778986267------878


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE
Q ss_conf             999999997799999998747971676688200--------365317898247310113734567888999998886282
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEI  341 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~  341 (391)
                      .-|.+|+.+++..+-+|+++++..... -.|.+        .+...++|.+.+..      +.    ...+...|.--..
T Consensus       258 ~lRm~~~~~nA~~lA~~L~~hp~V~~V-~yP~~~la~k~~~~~gg~~sf~l~~~~------~~----~~~f~~~l~l~~~  326 (386)
T PRK06767        258 AVRMDRHCDNAEKIVSFLKNHDAVEGV-WYPEGELASRQMKRGGGVISFSIKGGK------EE----TQAFINDLHFITI  326 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCHHHHHHHHHCCCCEEEEEEECCH------HH----HHHHHHHCCCCEE
T ss_conf             999999999999999999639983758-796888998872138946899993889------99----9999983887524


Q ss_pred             EECCCCCCCCC-----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             87266556767-----------------------50568615888999999999999999999
Q gi|254780153|r  342 AYDIGSYRDAP-----------------------LGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       342 ~~~~~~~r~~~-----------------------~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      ++.+|+.++.-                       .-+|+++|    .||++.|++-|+.|+++
T Consensus       327 a~SlGg~eSLi~~p~~~~h~~~~~e~r~~~Gi~~~lvRlSvG----lEd~~DLi~Dl~qAL~~  385 (386)
T PRK06767        327 AVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG----LESWEDIVSDLEQALKK  385 (386)
T ss_pred             EECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHC
T ss_conf             205677630235764235645899999866979297999941----09999999999999841


No 150
>PRK07046 aminotransferase; Validated
Probab=99.16  E-value=9.2e-08  Score=68.75  Aligned_cols=326  Identities=12%  Similarity=0.039  Sum_probs=164.0

Q ss_pred             CHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECC
Q ss_conf             968999986321036-53289889999999999999996889985799974873489998753205--789707997073
Q gi|254780153|r   24 RPGWSLGILEGALLG-RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~-~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~  100 (391)
                      +|+ |.+++.+++-. .++--+  .+..-++-+.|.+.++++   .+.| ..|||.+.+.++.=.-  ..+++++...|+
T Consensus        92 ~p~-v~~Av~~q~~~g~~~~~~--~~~~~~lae~l~~~~~~~---~~~f-~~sGsEA~~~AirlAR~~TgR~~Ii~f~g~  164 (452)
T PRK07046         92 PAP-VARALAEQARRGLTTMLP--SEDAAWVGEELARRFGLP---YWQV-ATTASDANRFVLRWARAATGRKKILVFNGC  164 (452)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHCCC---EEEE-ECCHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             999-999999998725545578--579999999989873886---1775-377999999999998645499769996367


Q ss_pred             HHHHHHHHH-HH-CCCCCEE--------------EEECCCCCCCCHHHCCCCCCEEEEEEEC---CCCEEECCE------
Q ss_conf             688888765-32-3876306--------------7405777657867678556579974202---420220320------
Q gi|254780153|r  101 FGLGWMSDI-RQ-LSLQDVR--------------EFTAPYGSLPDFSKVDFDRDVVFVWNGT---TSGVCVPDV------  155 (391)
Q Consensus       101 ~~~r~~~~~-~~-~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~v~~~h~ET---stGv~~~~~------  155 (391)
                      |=+. .... .. ..+....              ....+++....++..-...+++.+-.|.   +.|+..|..      
T Consensus       165 YHG~-~d~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~nd~~~le~~l~~~~iAAvi~EPi~g~~G~i~p~~~fl~~l  243 (452)
T PRK07046        165 YHGT-VDDVFVDLADGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVACVLAEPAMTNIGMVLPEPGFWEAL  243 (452)
T ss_pred             CCCC-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf             6786-057898647998667898889887767764301668789999971789867999976886788757999999999


Q ss_pred             EEECCCCCCEEEEEECCHHHHCC---CCCCCCEEEEECCHHCCCC-CCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             35025686148864011011025---4556857999700120017-6651544567788876541144577831232001
Q gi|254780153|r  156 GFIPESREGLVICDATSAVFARH---IDFNKLDVVTFSAQKVLGG-EAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       156 ~~~~~~~~~llivD~vSs~g~~p---~d~~~iDv~~a~sQK~l~~-ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      ..+|.++++|+|+|=|.++-.-+   ...+++.=.+..--|+|++ -| ++.+..+.+..++.........       ..
T Consensus       244 relc~~~giLLI~DEV~T~r~g~Gg~~~~~Gv~PDl~t~gK~iggG~P-~ga~~~~~~i~~~~~~~~~~~~-------~g  315 (452)
T PRK07046        244 RELTRRHGTLLVIDETHTISSGPGGYTRAHGLEPDFLVVGKPIAGGVP-CAVYGFSAALAERARAAKASAP-------PG  315 (452)
T ss_pred             HHHHHHCCEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEHHHHCCCCC-EEEECCHHHHHHHHHHHCCCCC-------CC
T ss_conf             999975897999936661001685387986879666764443128886-3434025999988875214567-------87


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             12321033478644666448899999999862010318999999997799999998747971676688200365317898
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK  311 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~  311 (391)
                            ....++|++--|+ ...+....|+.+++++-+++..++-++..+.+.+.+++.+.- ..+  ....+...+.|.
T Consensus       316 ------~~~~ggTf~gnpl-a~AAa~A~L~~l~~~~~~~~~~~~g~~L~~gL~~~~~~~~~~-~~v--~g~G~~~~~~f~  385 (452)
T PRK07046        316 ------HSGIGTTLSANAL-AMAAMRATLAEVMTDAAYAHMFALAARLAAGLRATIARHGLP-WHV--TRIGARVEFQFA  385 (452)
T ss_pred             ------CCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-EEE--EEECCEEEEEEE
T ss_conf             ------5687888787989-999999999999555299999999999999999999867997-599--755746899960


Q ss_pred             ECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             24731011373--4567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r  312 IVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       312 ~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      ..++. ...+.  ..+......+...+.++|+.+.  ++   +..+.++.  .++++||+.+++++|.++.++-
T Consensus       386 ~~~~~-~~~~~~~~~d~~~~~~~~~~ll~rGVll~--p~---~n~~~~sp--~~T~edID~~v~a~~~al~el~  451 (452)
T PRK07046        386 PTPPR-NGAEAGAALDGELEHALHLYLLNRGVLIT--PF---HNMMLVCP--QTTAEDVDRLVAAFDACLGELL  451 (452)
T ss_pred             CCCCC-CHHHHHHCCCHHHHHHHHHHHHHCCEEEC--CC---CCCEEECC--CCCHHHHHHHHHHHHHHHHHHH
T ss_conf             78875-67888744339999999999997995588--76---75477864--4899999999999999999850


No 151
>PRK08912 hypothetical protein; Provisional
Probab=99.16  E-value=5.2e-07  Score=63.97  Aligned_cols=328  Identities=16%  Similarity=0.080  Sum_probs=178.5

Q ss_pred             CCCCCCCCCCC-CCCCHHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHHH
Q ss_conf             89988868887-7689689999863210365328---9889999999999999996889985--7999748734899987
Q gi|254780153|r   10 KPKRPFFSSGP-CAKRPGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEMA   83 (391)
Q Consensus        10 ~p~~~~F~pGP-~~~~p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea~   83 (391)
                      .+.-+|++-|= .--.|..+++++.+++-+-+|+   +.=..++-+.+-+.+++.+++.-+.  +| +++.|++.++..+
T Consensus        25 ~~~~I~L~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~p~~~V-~vt~Ga~~al~~~  103 (387)
T PRK08912         25 EHGAINLGQGFPDDPGPEDVRRAAADALLDGYNQYPPMMGLPELRQAVAAHYARFHGLDLDPMTEV-MVTSGATEALAAA  103 (387)
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHH
T ss_conf             799277369789999889999999999852999898998729999999999999868998988729-9876689999999


Q ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE
Q ss_conf             53205789707997073688888765323876306740-57776578676785-----5657997420242022032035
Q gi|254780153|r   84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF  157 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~  157 (391)
                      +.-++++||.+++..=.|... ...+...+. .+..+. .+.+...+.+.++.     .+.+.++.=..-||...+..+.
T Consensus       104 ~~al~~pGD~Vlv~~P~y~~y-~~~~~~~G~-~~~~v~~~~~~~~~d~~~l~~~~~~~tk~iil~~P~NPTG~v~s~e~l  181 (387)
T PRK08912        104 LLALVEPGDEVVLFQPLYDSY-LPIIRRAGG-VPRLVRLEPPHWRLPEAALAAAFSPRTKAVLLNNPLNPAGKVFPREDL  181 (387)
T ss_pred             HHHHCCCCCEEEEECCCCHHH-HHHHHHCCC-EEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf             999669989899948808117-999997298-899756558777889999985278886699989998988856869999


Q ss_pred             -----ECCCCCCEEEEEECCHH---HHC-CCC---CC---CCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCC
Q ss_conf             -----02568614886401101---102-545---56---8579997001200176651--5445677888765411445
Q gi|254780153|r  158 -----IPESREGLVICDATSAV---FAR-HID---FN---KLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPS  220 (391)
Q Consensus       158 -----~~~~~~~llivD~vSs~---g~~-p~d---~~---~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~  220 (391)
                           +|..++..+|.|-+=+-   .+. +..   ..   +--+.+.|.-|.++ .||+  |.++..++.++++..... 
T Consensus       182 ~~l~~~a~~~~i~vi~DEiY~~l~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~-m~G~RiG~~~~~~~li~~l~~~~~-  259 (387)
T PRK08912        182 ALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMALPGMRERTVKIGSAGKIFS-LTGWKVGFVCAAPPLLRVLAKAHQ-  259 (387)
T ss_pred             HHHHHHHHHCCEEEEECCCHHHEEECCCCCCHHHCCCCCCCCEEEECCCCCEEC-CCCCCEEEEEECHHHHHHHHHHHH-
T ss_conf             999998865797998026523315678654044406676673699856777520-553327999839999999999987-


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE  300 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~  300 (391)
                                           ..+..||+.. -++...+|..-  +.-++.+.+..+++.+.+.+.+...+ +.....+ 
T Consensus       260 ---------------------~~~~~~~~~~-Q~a~a~~l~~~--~~~~~~~~~~~~~rr~~l~~~L~~~g-~~~~~~~-  313 (387)
T PRK08912        260 ---------------------FLTFTTPPNL-QRAVAYGLGKP--DDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQ-  313 (387)
T ss_pred             ---------------------HCCCCCCHHH-HHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC-
T ss_conf             ---------------------5855766999-99999997387--79999999999999999999999769-8562798-


Q ss_pred             CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCC-CC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             00365317898247310113734567888999998886282872665--5676-75-05686158889999999999999
Q gi|254780153|r  301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDA-PL-GLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~-~~-~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                         +..-+...+......   . .+..+   ....+.+.|+++--|.  |..- ++ .+|++.-  .+++.++.-++-|+
T Consensus       314 ---G~~~~~~~~~~~~~~---~-~~~~f---~~~ll~e~gV~~vPG~~F~~~~~~~~~iRlsfa--~~~e~l~ea~~RL~  381 (387)
T PRK08912        314 ---GTYFLTVDLAPLGLA---E-DDVAF---CRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLA  381 (387)
T ss_pred             ---CEEEEEEECCCCCCC---C-CHHHH---HHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEC--CCHHHHHHHHHHHH
T ss_conf             ---158998851455899---8-99999---999999689999815012899999985999979--99999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  377 WVFY  380 (391)
Q Consensus       377 ~~~~  380 (391)
                      .+++
T Consensus       382 ~~lk  385 (387)
T PRK08912        382 AAFR  385 (387)
T ss_pred             HHHH
T ss_conf             9983


No 152
>PRK07483 hypothetical protein; Provisional
Probab=99.16  E-value=2.5e-07  Score=66.01  Aligned_cols=332  Identities=11%  Similarity=0.038  Sum_probs=167.5

Q ss_pred             CHHHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCC-------CCCC-
Q ss_conf             96899998632103--65328988999999999999999688998-5799974873489998753205-------7897-
Q gi|254780153|r   24 RPGWSLGILEGALL--GRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLL-------GYRG-   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l--~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~-------~~~~-   92 (391)
                      +|+ |.+++.+++-  ...|-+.--.+...+.-+.|.++.  |.+ .+++| ..|||.++|+++.=..       .++. 
T Consensus        48 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~Lae~L~~~~--p~~~~~v~f-~~sGsEAve~AiklAr~y~~~~g~~~r~  123 (443)
T PRK07483         48 HPR-VIAAIKAQIDRLAYAHTSFFTTEPAEALADRLVAAA--PAGLEHVYF-VSGGSEAVEAALKLARQYFVEKGQPQRR  123 (443)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             799-999999998336874457557789999999999857--888587999-6866889999999999999871899872


Q ss_pred             EEEEEECCHHHHHHHHHHHCC---------C--CCEEEEECCC-------CCCCC------HHHCC------CCCCEEEE
Q ss_conf             079970736888887653238---------7--6306740577-------76578------67678------55657997
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLS---------L--QDVREFTAPY-------GSLPD------FSKVD------FDRDVVFV  142 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~---------~--~~~~~~~~~~-------g~~~~------~~~~~------~~~~v~~~  142 (391)
                      .++...++|=++.......-+         .  ..+..+..++       ++.+.      .++++      ....++.+
T Consensus       124 ~ii~~~~~yHG~t~gals~sg~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAav  203 (443)
T PRK07483        124 HFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRDQRAGETDEAYGQRLADELEAKILELGPDTVAAF  203 (443)
T ss_pred             EEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             89998378878850011014761015888888888444068875445678888789999999999999986088867899


Q ss_pred             EEECCC----CEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEE
Q ss_conf             420242----022032------035025686148864011011025---4--5568579997001200176-65154456
Q gi|254780153|r  143 WNGTTS----GVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIIL  206 (391)
Q Consensus       143 h~ETst----Gv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~  206 (391)
                      -.|...    |+..|.      .+.+|+++++++|+|=|.+=.++-   +  +..++.=.+...-|+|++= .=++.++.
T Consensus       204 i~EPi~g~~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~a~~~  283 (443)
T PRK07483        204 VAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLLTIAKGLGAGYQPIGAVLA  283 (443)
T ss_pred             EEECCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEE
T ss_conf             98343047588544888999999999986695899961522788543775300045589810133322488773279975


Q ss_pred             CHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             77888765411445778312320011232103347864466644889999999986201031899999999779999999
Q gi|254780153|r  207 SPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQF  286 (391)
Q Consensus       207 s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~  286 (391)
                      +++..+....   ..   .++            ..++|+.-=|+ ...+...+|+.+++++    ...+.+++.+.+.+.
T Consensus       284 ~~~i~~~~~~---~~---~~~------------~hg~T~~gnpl-a~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~  340 (443)
T PRK07483        284 SDRIYDAIAD---GS---GFF------------QHGHTYLGHAT-ACAAALAVQRVIAEDG----LLANVRARGEQLRAR  340 (443)
T ss_pred             CHHHHHHHCC---CC---CCC------------CCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHH
T ss_conf             6899975436---87---533------------45888889989-9999999999998646----999999999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCEEE-EE-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC-C--CCCCEEEEECCC
Q ss_conf             87479716766882003653178-98-2473101137345678889999988862828726655-6--767505686158
Q gi|254780153|r  287 IQENDWIENLAVDETTRSNTSIC-MK-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY-R--DAPLGLRVWVGV  361 (391)
Q Consensus       287 i~~~~~~~~~~~~~~~rS~~~v~-~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-r--~~~~~~RIg~~g  361 (391)
                      ++..-.-.+.+.  +.|...... +. +.|+..... .+........+.....++|.++...+. .  ..+..+|+.--=
T Consensus       341 L~~l~~~~p~I~--dVRG~GLm~gielv~~~~~~~~-~d~~~~~~~~i~~~~~~~Gll~~~~g~~~~g~~~~~i~l~PPL  417 (443)
T PRK07483        341 LRERLGQHPHVG--DIRGRGLFVGVELVADRATKAP-FDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPF  417 (443)
T ss_pred             HHHHHHCCCCEE--EEECCEEEEEEEEECCCCCCCC-CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCC
T ss_conf             999986499778--8540414899997326765677-7756899999999999789589877776457769989998996


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             889999999999999999999998
Q gi|254780153|r  362 TVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       362 ~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      .++.++|+.+++.|+.++.++-++
T Consensus       418 ~it~~eid~~i~~l~~aL~~v~a~  441 (443)
T PRK07483        418 IITAQQIDEIVERLGDAIDAALAA  441 (443)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             289999999999999999999984


No 153
>pfam01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor.
Probab=99.16  E-value=3.5e-08  Score=71.36  Aligned_cols=280  Identities=19%  Similarity=0.207  Sum_probs=160.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-...+++.   |..+=+...   + ++.+||-.|..+++++++++|+.+++....||.-  .++...+..+.++...
T Consensus        50 ~nPt~~~le~~---la~LEg~~~---a-~~~~SGmaAi~~~ll~l~~~Gd~il~~~~~Yg~t~~~~~~~l~~~Gi~v~~~  122 (381)
T pfam01053        50 GNPTRDALEER---IAALEGGEA---A-LAFSSGMAAIFAALLALLKAGDHVVATDDLYGGTYRLFEKVLPRFGIEVTFV  122 (381)
T ss_pred             CCHHHHHHHHH---HHHHHCCCE---E-EEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf             88679999999---999819973---8-9935889999999975579999899957873758999999887158506762


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC--E---EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--5657997420242022032--0---3502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD--V---GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~--~---~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     ++++++.  .....+++.||.+--....  .   ..+++++++++|||-+  +-+...|++. ++|+++-|.
T Consensus       123 d~~-----d~~~~~~~i~~~T~li~~EspsNP~l~v~Di~~ia~iA~~~gi~~vVDNT~atP~~~~Pl~~-GaDivvhS~  196 (381)
T pfam01053       123 DPS-----DLDALEAAIKPNTKAVFLETPTNPLLKVVDIEAIAKIAKKHGALVVVDNTFASPYLQRPLEL-GADIVVHSA  196 (381)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCHHHHCCCHHC-CCCEEEEEC
T ss_conf             665-----86789975588842999974899860512609999998645735998788600521241330-797799753


Q ss_pred             HHCCCCCCCC--EEEEECH--HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             1200176651--5445677--88876541144577831232001123210334786446664488999999998620103
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSP--ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG  267 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~--~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g  267 (391)
                      -|-++|-.-+  |.|+.+.  +..++...            +.        ...|.   +++-+..|.+...|      .
T Consensus       197 TKyi~GhsDvl~G~v~~~~~~~~~~~l~~------------~~--------~~~G~---~~~p~~a~l~~rgl------~  247 (381)
T pfam01053       197 TKYIGGHSDVVGGVVVVNGREELAKRLRF------------LQ--------NATGA---VLSPFDAWLLLRGL------K  247 (381)
T ss_pred             CCCCCCCCCCEEEEEEECCCHHHHHHHHH------------HH--------HHHCC---CCCHHHHHHHHHCC------C
T ss_conf             43036887613059996882668999999------------99--------86168---78868889987147------8


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             1899999999779999999874797167-----6688200--------36531789824731011373456788899999
Q gi|254780153|r  268 GLSACVERCNANAAVLFQFIQENDWIEN-----LAVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLS  334 (391)
Q Consensus       268 Gl~~~~~r~~~~a~~l~~~i~~~~~~~~-----~~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~  334 (391)
                      .+.-|.+|+.+++..+-+|++.++....     +...|.+        .....+.|.+.++.       .    .+.+..
T Consensus       248 TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~r~~~g~ggl~sf~l~~~~-------~----~~~f~d  316 (381)
T pfam01053       248 TLGLRMERHQENALKLAEFLEEHPKVEKVYYPGLPSHPGHELAKKQMSGFGGMLSFELKGGE-------A----ASKFLD  316 (381)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHH-------H----HHHHHH
T ss_conf             79999999888999999999729997779575899980499999758999973189867899-------9----999998


Q ss_pred             HHHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             88862828726655676----------------------75-05686158889999999999999999
Q gi|254780153|r  335 FLEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       335 ~l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      .|.--..+..+|+.++.                      .. -+|+++|=    ||++.|++-|+.||
T Consensus       317 ~l~lf~~~~SlGg~eSLi~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGl----Ed~~DLi~DL~qAL  380 (381)
T pfam01053       317 NLKLFSLAESLGGVESLISHPATMTHASIPPEEREAAGITDGLIRLSVGI----EDVDDLIADLKQAL  380 (381)
T ss_pred             HCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHC
T ss_conf             47713353565875606557641353118999998669793959999500----99999999999863


No 154
>PRK06541 hypothetical protein; Provisional
Probab=99.16  E-value=2.4e-07  Score=66.15  Aligned_cols=330  Identities=11%  Similarity=0.029  Sum_probs=170.1

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------CC-CCC-E
Q ss_conf             968999986321036532898-89-99999999999999688998579997487348999875320------57-897-0
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------LG-YRG-V   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~~-~~~-~   93 (391)
                      +|+ |.+++.+++-...|-+. .| .+-..+.-++|.+++  |.+..-+++..|||.++|+++.=-      .+ ++. .
T Consensus        70 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~f~~SGsEA~E~AiklAr~y~~~~G~~~r~~  146 (460)
T PRK06541         70 RAE-LAEAAAEQAGTLAFFPLWSYAHPPAIELAERLAALA--PGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHK  146 (460)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             899-999999999757875677557879999999999748--88869899708748999999999999999619998618


Q ss_pred             EEEEECCHHHHHHHHHHHCCCC-----------CEEEEECCC-------CCCCC------HHHC------CCCCCEEEEE
Q ss_conf             7997073688888765323876-----------306740577-------76578------6767------8556579974
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSLQ-----------DVREFTAPY-------GSLPD------FSKV------DFDRDVVFVW  143 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~~-----------~~~~~~~~~-------g~~~~------~~~~------~~~~~v~~~h  143 (391)
                      ++...++|=++...-..--+..           .+.....+.       +....      .+.+      +....++.+-
T Consensus       147 iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavI  226 (460)
T PRK06541        147 VISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRAPEHGDDPEAFGRWAADRIEEAIEFEGPDTVAAVF  226 (460)
T ss_pred             EEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             99966871678657887518800037887889991676888644577678998899999999999999851998578998


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf             202420---22032------035025686148864011011025---4--5568579997001200176-6515445677
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP  208 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~  208 (391)
                      .|...|   +..+.      ...+|+++++++|+|=|.+=.++-   +  +..++-=.+...-|+|++= .-++.++.++
T Consensus       227 ~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVqtGfGRtG~~fa~e~~gv~PDiv~~gKglg~G~~Pl~av~~~~  306 (460)
T PRK06541        227 LEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASD  306 (460)
T ss_pred             ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCH
T ss_conf             45777878865686899999999746479537667512078653373220168948951412231258877704674039


Q ss_pred             HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r  209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ  288 (391)
Q Consensus       209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~  288 (391)
                      +..+....   ...               ....++|+.-=|+ ...+...+|+.+++++    ..++.+++.+.+.+.++
T Consensus       307 ~i~~~~~~---~~~---------------~~~hg~T~~gnpl-a~aaa~avL~~i~~~~----l~~~v~~~G~~l~~~L~  363 (460)
T PRK06541        307 RLVEPFLD---GKT---------------MFLHGYTFGGHPV-SAAVALANLDIFEREG----LLDHVRDNEPAFRATLE  363 (460)
T ss_pred             HHHHHHCC---CCC---------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHH
T ss_conf             99876526---885---------------3135767888989-9999999999998657----99999999999999999


Q ss_pred             HCCCCCCCCCCCCCCCCCEEE-EEE-CCCCCCCC-CHHHHHHHHHH-HHHHHHHCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf             479716766882003653178-982-47310113-73456788899-999888628287266556767505686158889
Q gi|254780153|r  289 ENDWIENLAVDETTRSNTSIC-MKI-VDSDIASL-DINSQKSFCKS-MLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVE  364 (391)
Q Consensus       289 ~~~~~~~~~~~~~~rS~~~v~-~~~-~d~~~~~~-~~~~~~~~~~~-~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~  364 (391)
                      .+.- .+.+.  +.|...... +.+ .|...... +........++ +...+.+.|.++...+.  -+..+|+.--=.++
T Consensus       364 ~l~~-~p~v~--dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~~--~~~virl~PPL~it  438 (460)
T PRK06541        364 KLLD-LPIVG--DVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDR--GDPVVQLAPPLISG  438 (460)
T ss_pred             HHHC-CCCEE--EEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCC--CCCEEEEECCEECC
T ss_conf             9746-99778--7410773899995457654566764677899999999999978959974589--99889997893378


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999
Q gi|254780153|r  365 KEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       365 ~~dv~~L~~aLe~~~~~~k~  384 (391)
                      .++++.+++.||.++.++.-
T Consensus       439 ~~eid~~l~~l~~aL~e~~~  458 (460)
T PRK06541        439 QEEFDEIEAILRSVLTEAWR  458 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999996


No 155
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=99.15  E-value=6.1e-08  Score=69.89  Aligned_cols=313  Identities=15%  Similarity=0.062  Sum_probs=160.6

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CC-CC-E
Q ss_conf             9689999863210365328988999-9999999999996889985799974873489998753205-------78-97-0
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GY-RG-V   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~-~~-~   93 (391)
                      +|+ |.+++.+++-...|.+.-|.. --.+.-+.|.++..  ...+|+ +..|||.++|+++.=..       ++ +. .
T Consensus        58 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L~~~~~--~~~~v~-f~~SGsEAvE~AlKlAr~y~~~~G~~~~k~~  133 (408)
T PRK04612         58 DPD-LVAALTEQAGKLWHTSNVFFSAPPLKLAEELVTASR--FAEKVF-LCNSGTEANEAAIKLVRKWASSQGRPADKRV  133 (408)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC--CCCEEE-ECCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             899-999999998652576675226589999999972268--876699-7187468999999999999873288777769


Q ss_pred             EEEEECCHHHHHHHHHHHCCCCCEEE---------EECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------E
Q ss_conf             79970736888887653238763067---------405777657867678556579974202420---22032------0
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSLQDVRE---------FTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------V  155 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------~  155 (391)
                      .+...++|-++........+......         ...+++....++..-...+++.+-.|...|   +..+.      .
T Consensus       134 ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~~~~d~~~le~~~~~~~iAAvivEPi~g~gG~~~~~~~yl~~l  213 (408)
T PRK04612        134 IVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARV  213 (408)
T ss_pred             EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf             99985852598767422567843346888998852543667499999715699789999978678888306899999999


Q ss_pred             EEECCCCCCEEEEEECCH-HHH--CCCCCC--CC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             350256861488640110-110--254556--85--79997001200176651544567788876541144577831232
Q gi|254780153|r  156 GFIPESREGLVICDATSA-VFA--RHIDFN--KL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR  228 (391)
Q Consensus       156 ~~~~~~~~~llivD~vSs-~g~--~p~d~~--~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~  228 (391)
                      ..+|+++++++|+|=|.+ ||-  .-+-.+  ++  |++  ..-|+|++===++.++.+++..+...             
T Consensus       214 ~~lc~~~gillI~DEV~TGfGRtG~~fa~~~~~v~PDii--~~gKglg~G~Pl~av~~~~~i~~~~~-------------  278 (408)
T PRK04612        214 RALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIV--TLAKALGGGFPIGAMLAGPKVAETMQ-------------  278 (408)
T ss_pred             HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEE--EEEHHHCCCCCEEEEEECHHHHHHCC-------------
T ss_conf             999975694698501224788676203555128999989--97232238876289998688885146-------------


Q ss_pred             CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf             00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r  229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI  308 (391)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v  308 (391)
                               ....++|+..-|+ ...+...+|+.+++++ +   ..+.+++.+.+.+.+.+..--.+.+.  +.|....+
T Consensus       279 ---------~~~h~~T~~gnpl-a~aaala~L~~i~~~~-l---~~~~~~~g~~l~~~L~~l~~~~~~i~--~vRG~GLm  342 (408)
T PRK04612        279 ---------FGAHGTTFGGNPL-AAAVARVALRKLASPQ-I---AANVARQSAALRAGLEALNAEFGVFA--QIRGRGLM  342 (408)
T ss_pred             ---------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHHHCCCCEE--EECCCCEE
T ss_conf             ---------8997888873599-9999999999998666-9---99999999999999999874079888--32204469


Q ss_pred             E-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8-982473101137345678889999988862828726655676750568615888999999999999999999999
Q gi|254780153|r  309 C-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       309 ~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      . +.+.+..         ......+...+.++|+++...+    ++.+|+.--=.++.++|+.+++.|+.++...=+
T Consensus       343 ~giel~~~~---------~~~~~~i~~~~~~~Gll~~~~g----~~~irl~PPL~it~~eide~l~~l~~al~~~~a  406 (408)
T PRK04612        343 LGAVLAPAH---------AGQAGAILDLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALAAYVA  406 (408)
T ss_pred             EEEEECCCC---------CCHHHHHHHHHHHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             999954788---------6269999999997891993179----997999688338899999999999999999982


No 156
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.15  E-value=7e-08  Score=69.48  Aligned_cols=321  Identities=15%  Similarity=0.074  Sum_probs=204.0

Q ss_pred             CCCCCCC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCCCEEEEEE-CCHHHHH--HHHH
Q ss_conf             0365328--9889999999999999996889985799974873489998753205-7897079970-7368888--8765
Q gi|254780153|r   36 LLGRSHR--CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYRGVDVLAW-ESFGLGW--MSDI  109 (391)
Q Consensus        36 ~l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~~~~~~~~-g~~~~r~--~~~~  109 (391)
                      .+ +||-  .+...++=+.+-.+|..+.+...+ ||+++.++----+-..+.-|- .++..+++.. +.|-...  ++-.
T Consensus        63 li-rsw~~a~~~W~~lp~~lgdklApLiGA~~~-Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~  140 (407)
T COG3844          63 LI-RSWNKAKADWFDLPERLGDKLAPLIGARAG-EVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGL  140 (407)
T ss_pred             HH-HHHCCCCCCHHHCHHHHHHHHHHHHCCCCC-CEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCH
T ss_conf             35-432025886322536777776443168878-4697278516799999998466788559964588888513431236


Q ss_pred             HHCCC--CCEEEEECCCCCCCCHHHCCCC-CCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCC--CC
Q ss_conf             32387--6306740577765786767855-657997420242022032035--02568614886401101102545--56
Q gi|254780153|r  110 RQLSL--QDVREFTAPYGSLPDFSKVDFD-RDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHID--FN  182 (391)
Q Consensus       110 ~~~~~--~~~~~~~~~~g~~~~~~~~~~~-~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d--~~  182 (391)
                      ++..+  .++.....|.   ...+.+... ..|.+.|+.--||-..+..++  ++|.++++++.|-.-|.|+.|+|  -+
T Consensus       141 ~~~~~~~~~~~~~~~P~---~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~  217 (407)
T COG3844         141 ADLLGIGYDLEGVIAPR---ALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAA  217 (407)
T ss_pred             HHHHCCCCCCEEEECHH---HHHHHHCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCEEEEEHHCCCCCCCEEECCC
T ss_conf             66615654513432727---788750465579984563444341223889999887458647762011257765110346


Q ss_pred             CCEEEEECCHHCC-CCCCCCEEEEECHHHHHHHHHCCCCCCCC-CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             8579997001200-17665154456778887654114457783-123200112321033478644666448899999999
Q gi|254780153|r  183 KLDVVTFSAQKVL-GGEAGFGIIILSPASVERLEKYVPSWPLP-KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL  260 (391)
Q Consensus       183 ~iDv~~a~sQK~l-~~ppGl~~v~~s~~al~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l  260 (391)
                      +.|..+.++-|-| +||.+.+++.+.++-.++.......|+-+ +-|.+...........+ -.-.||||....++.-+|
T Consensus       218 gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~r-f~~gt~~V~s~aal~~aL  296 (407)
T COG3844         218 GADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARR-FLCGTQPVLSLAALEGAL  296 (407)
T ss_pred             CCCEEEEEECEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC-EEECCCCHHHHHHHHHHH
T ss_conf             7874410100002579997206886102245444533343577885012320376765101-220782265667774013


Q ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             862010318999999997799999998747971676----6882003653178982473101137345678889999988
Q gi|254780153|r  261 LWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL----AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       261 ~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~----~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      +.+-+. ++....+++-.....+-+-++++-..+++    +.+.+.|.. -+.+..+              ....+..+|
T Consensus       297 Difa~~-~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGs-qvS~~hp--------------~~~~V~qaL  360 (407)
T COG3844         297 DIFADV-DITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGS-QVSLYHP--------------HGYQVMQAL  360 (407)
T ss_pred             HHHHHC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCCC-EEEEECC--------------CHHHHHHHH
T ss_conf             465533-789998765678999999988415667717846613543366-0357368--------------689999999


Q ss_pred             HHCCEEECCCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf             8628287266556767505686158-889999999999999999999
Q gi|254780153|r  337 EKEEIAYDIGSYRDAPLGLRVWVGV-TVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       337 ~~~g~~~~~~~~r~~~~~~RIg~~g-~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      -..|++.+   +| .+..+|.|.-+ ++.-+||=..+++|+.++.+.
T Consensus       361 i~rGVigD---~R-~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~  403 (407)
T COG3844         361 IDRGVIGD---FR-EPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL  403 (407)
T ss_pred             HHCCCCCC---CC-CCCEEEECCCCCEECHHHHHHHHHHHHHHHHHH
T ss_conf             97384133---56-887356427531111658999999999999752


No 157
>PRK09276 aspartate aminotransferase; Provisional
Probab=99.15  E-value=1.1e-07  Score=68.15  Aligned_cols=316  Identities=11%  Similarity=0.056  Sum_probs=167.8

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHHHHH
Q ss_conf             8868887768-968999986321036-5328---98899999999999999968899--857999748734899987532
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPE--NYRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~--~y~v~~l~GsgT~~~ea~~~n   86 (391)
                      .+|+-|=-.. +|..+++++...+-. ..|+   +.-..++-+.+.+.+++-++..-  +.+| +.+.|++.++..++..
T Consensus        34 i~l~~G~pd~~~p~~i~~al~~a~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~v-v~t~Ga~~al~~~~~~  112 (385)
T PRK09276         34 ISLGIGDPDMPTPKHIVEAMKKAAEDPANHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEV-ISLIGSKEGIAHIPLA  112 (385)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCCHHHHHHHHHH
T ss_conf             889799899998999999999998087776659972719999999999999829876867769-9878844999999999


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf             0578970799707368888876532387630674--057776578676785-----565799742024202203203---
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG---  156 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~---  156 (391)
                      ++++||.+++..=.|..-  ..+.+..+..+..+  ....+..+++++++.     .+.+.++.=..-||...+..+   
T Consensus       113 l~~pGD~Vli~~P~Y~~y--~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~~~~~~k~iil~~P~NPTG~v~s~~~l~~  190 (385)
T PRK09276        113 FVNPGDYVLVPDPGYPVY--AIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVARKAKLMFINYPNNPTGAVADLEFFEK  190 (385)
T ss_pred             HCCCCCEEEECCCCCCHH--HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
T ss_conf             739999899888866205--999998699785068666679857999999751016729998999898551111889999


Q ss_pred             --EECCCCCCEEEEEECCHHH---HC-CC---CC---CCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCC
Q ss_conf             --5025686148864011011---02-54---55---6857999700120017665--1544567788876541144577
Q gi|254780153|r  157 --FIPESREGLVICDATSAVF---AR-HI---DF---NKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       157 --~~~~~~~~llivD~vSs~g---~~-p~---d~---~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~  222 (391)
                        .+|.+++..+|.|-+=+-.   .. +.   ..   ....+.+.|.-|.++ .||  +|.++.+++.+++......   
T Consensus       191 l~~la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~l~~~~~---  266 (385)
T PRK09276        191 VVDFAKKYDIIVCHDNAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYN-MTGWRIGFAVGNADLIAGLGKVKS---  266 (385)
T ss_pred             HHHHHCCCCCEEEEHHHHHHHCCCCCCCCCHHHCCCCCCCCCEECCCCCCCC-CCCCEEEEEECCHHHHHHHHHHHH---
T ss_conf             9876325575697544422210388888776553454244303046545568-876207999759999999999997---


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                                         .....+ +...-++...+++.-  +.-++.+.+.++++.+.+.+.+...+ +....++   
T Consensus       267 -------------------~~~~~~-~~~~q~a~~~al~~~--~~~~~~~~~~~~~rr~~~~~~L~~~g-~~~~~p~---  320 (385)
T PRK09276        267 -------------------NVDSGV-FQAIQEAAIAALNGP--QDVVEELRAIYQERRDILVEGLNSLG-WEVEKPK---  320 (385)
T ss_pred             -------------------HCCCCC-HHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC---
T ss_conf             -------------------655771-099999999998486--99999999998999999999998769-8662688---


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             365317898247310113734567888999998-886282872665-5676750-5686158889999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                       +..-+-+.+++..    +       ..++... +.+.|+++--|. +...+.+ +|++.  ..+.+.++.-++-|+
T Consensus       321 -gg~~~w~~l~~~~----~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~--a~~~e~l~eal~Rl~  383 (385)
T PRK09276        321 -ATFYVWAPVPKGY----T-------SAEFATLLLDKAGIVVTPGNGFGTAGEGYFRIAL--TVPDERIEEAVERIK  383 (385)
T ss_pred             -EEEEEEEECCCCC----C-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEE--ECCHHHHHHHHHHHH
T ss_conf             -5779978899998----9-------8999999998199999887421889988699997--599999999999984


No 158
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.15  E-value=1.2e-07  Score=67.94  Aligned_cols=316  Identities=11%  Similarity=0.042  Sum_probs=166.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCCCEE
Q ss_conf             968999986321036532898--8999999999999999688998579997487348999875320------5-789707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYRGVD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~~~~   94 (391)
                      +|+ |.+++.+++-..+|-..  -..+.-.+.-++|.++.  |.+..-+|+..||+.|+|+++.=-      - .++.++
T Consensus        61 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~vff~~sGSEAvE~AlKlAr~y~~~~g~~r~~i  137 (428)
T PRK07986         61 HPQ-LNAAMKSQIDAMSHVMFGGITHQPAIELCRKLVAMT--PQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRF  137 (428)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             699-999999999757870368867789999999999848--88758699648628999999999999999709986449


Q ss_pred             EEEECCHHHHHHHHHHHCC----------C--CCEEEEECCCCCC------CCHHHC-----CCCCCEEEEEEECC----
Q ss_conf             9970736888887653238----------7--6306740577765------786767-----85565799742024----
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLS----------L--QDVREFTAPYGSL------PDFSKV-----DFDRDVVFVWNGTT----  147 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~----------~--~~~~~~~~~~g~~------~~~~~~-----~~~~~v~~~h~ETs----  147 (391)
                      +...++|=++......--+          +  ........+....      -+..++     +....++.+-.|..    
T Consensus       138 i~~~~syHG~T~gals~t~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAviiEPi~qg~  217 (428)
T PRK07986        138 LTFRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGA  217 (428)
T ss_pred             EEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf             99838738997122573168644434557779985013788766565557123999999997478870189983244676


Q ss_pred             CCEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHH
Q ss_conf             2022032------035025686148864011011025---4--5568579997001200176-65154456778887654
Q gi|254780153|r  148 SGVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLE  215 (391)
Q Consensus       148 tGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~  215 (391)
                      -|+..|.      ...+|+++++++|+|=|.+=.++-   +  +..++.=.+...-|+|++= .=++.++.+++..+...
T Consensus       218 gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiit~gKgl~gG~~Pl~av~~~~~i~~~~~  297 (428)
T PRK07986        218 GGMRIYHPEWLKRIRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETIS  297 (428)
T ss_pred             CCCEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHCC
T ss_conf             98353899999999999986396366110002788667865000047899889975201388775389998699996305


Q ss_pred             HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             11445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r  216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN  295 (391)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~  295 (391)
                      .... .    .            ...++|+.--|+ ...+..++|+.++++ ++   ..+.+++.+.+.+.++.+.. .+
T Consensus       298 ~~~~-~----~------------f~hg~Tf~Gnpl-a~Aaa~a~L~~i~~~-~l---~~~~~~~g~~l~~~L~~L~~-~~  354 (428)
T PRK07986        298 NGEA-G----C------------FMHGPTFMGNPL-ACAVANASLSLLESG-DW---QQQVAAIESQLREELAPLRD-AE  354 (428)
T ss_pred             CCCC-C----C------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CH---HHHHHHHHHHHHHHHHHHHC-CC
T ss_conf             6876-5----4------------101778999989-999999999999865-69---99999999999999998755-99


Q ss_pred             CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             66882003653178982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r  296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      .+.+-..+.. ...+....|..           .+.+...+.++|+++..     .++.+|+.--=.+++++++.++++|
T Consensus       355 ~V~dVRg~Gl-~~~ve~~~p~~-----------~~~~~~~~~~~Gll~~~-----~g~~i~l~PPLiit~~ei~~~~~~l  417 (428)
T PRK07986        355 MVADVRVLGA-IGVVETTRPVN-----------MAALQRFFVEQGVWIRP-----FGKLIYLMPPYIILPEQLQRLTAAV  417 (428)
T ss_pred             CEEEEEECCE-EEEEEECCCCC-----------HHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             5787742672-89998079453-----------99999999979948974-----5999999899149999999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780153|r  376 RWVFYFQ  382 (391)
Q Consensus       376 e~~~~~~  382 (391)
                      |.++.++
T Consensus       418 ~~al~e~  424 (428)
T PRK07986        418 NRAVQDE  424 (428)
T ss_pred             HHHHHHH
T ss_conf             9999755


No 159
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.15  E-value=3e-08  Score=71.79  Aligned_cols=312  Identities=16%  Similarity=0.048  Sum_probs=170.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHH---HHCCCCCEE
Q ss_conf             98899999999999999968899857999748734899987532057-89707997073688888765---323876306
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YRGVDVLAWESFGLGWMSDI---RQLSLQDVR  118 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~~~~~~~~g~~~~r~~~~~---~~~~~~~~~  118 (391)
                      |.=..+++-+.++.|.+|.+.+--  -.=+.-+||++.||+.+-.-. +++++++.....-.. ...+   ++..+.++.
T Consensus       107 sQG~Lq~l~e~Q~~l~eLtGmd~~--nasl~dga~a~~ea~~ma~r~~~r~~vlv~~s~hP~~-~~v~~t~a~~~g~~vv  183 (449)
T PRK00451        107 SQGTLQAIFEYQTMICELTGMDVA--NASMYDGATALAEAALMAVRITGRNKVLVSGAVHPEY-REVLKTYLKGQGIEVV  183 (449)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH-HHHHHHHCCCCCCEEE
T ss_conf             139999999999999998598746--7787747789999999998642687399779878427-9999863015784279


Q ss_pred             EEECCCCCCCCHHHCCC----CCCEEEEEEECCCCEEECCEEE--ECCCCCCEEE--EEECCHHHHC--CCCCCCCEEEE
Q ss_conf             74057776578676785----5657997420242022032035--0256861488--6401101102--54556857999
Q gi|254780153|r  119 EFTAPYGSLPDFSKVDF----DRDVVFVWNGTTSGVCVPDVGF--IPESREGLVI--CDATSAVFAR--HIDFNKLDVVT  188 (391)
Q Consensus       119 ~~~~~~g~~~~~~~~~~----~~~v~~~h~ETstGv~~~~~~~--~~~~~~~lli--vD~vSs~g~~--p~d~~~iDv~~  188 (391)
                      .+....+-..|+++++.    .....++.|=+..|+.-+..++  ++|+.+++++  +|..| ++..  |-| +++|+++
T Consensus       184 ~v~~~~~g~~Dl~~L~~~~~~~~A~vmi~~Pnt~G~~edi~~i~~~vh~~g~l~~~~~n~~a-Lg~l~~PGe-~GaDIvv  261 (449)
T PRK00451        184 EVPYPEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVVVDPVS-LGLLKPPGE-YGADIVV  261 (449)
T ss_pred             EECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECHHH-HHCCCCCCC-CCCCEEE
T ss_conf             84577566668899986417875899985588777531699999999865974999716788-607678443-4540686


Q ss_pred             E-----CCHHCCCCCCCCEEEEECHHHHHHHHHCC------CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             7-----00120017665154456778887654114------457783123200112321033478644666448899999
Q gi|254780153|r  189 F-----SAQKVLGGEAGFGIIILSPASVERLEKYV------PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYI  257 (391)
Q Consensus       189 a-----~sQK~l~~ppGl~~v~~s~~al~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~  257 (391)
                      .     +..|++||| +.+++.++++...++-..-      ..+.....+.+...-+.  -.+..-|-|--.-..+.++.
T Consensus       262 g~~q~lg~p~~fGGP-~~G~~a~~~~l~r~lPgriVG~t~D~~G~~~y~LtLqtREQh--IrReKAtSnIctnq~l~a~~  338 (449)
T PRK00451        262 GEGQPLGIPLSFGGP-YLGFFATRKKLVRQMPGRLVGETVDVDGKRGFVLTLQAREQH--IRREKATSNICTNQALCALA  338 (449)
T ss_pred             ECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHH--CCCCCCCCCCCCCHHHHHHH
T ss_conf             247666778667899-878705565001028987667213678861201134553222--34555546666422788999


Q ss_pred             HH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99--9862010318999999997799999998747971676688200365317898247310113734567888999998
Q gi|254780153|r  258 DA--LLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       258 ~~--l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      ..  +.++= ..|+..+-++.-.+++.+.+.+.+.+++......+-..   -.++.++.             ...++.++
T Consensus       339 a~~Yi~~lG-~~GLk~va~~a~~nAnyl~~~L~~~~~~~~~~~~~~f~---Efv~~~~~-------------~a~~i~k~  401 (449)
T PRK00451        339 ATIYMSLLG-KEGLREVAEQNHQKAHYLAERLAEIGGVEVLFNGPFFN---EFVVRLPK-------------PAEEVNEA  401 (449)
T ss_pred             HHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEE---EEEEECCC-------------CHHHHHHH
T ss_conf             999999759-76699999999999999999987379834168998025---89997898-------------89999999


Q ss_pred             HHHCCEEEC--CCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             886282872--665-56767505686158889999999999999999
Q gi|254780153|r  336 LEKEEIAYD--IGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       336 l~~~g~~~~--~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      |.+.|+.-+  +.. +...+..+=|..==..+.+|+|+|+++|..+.
T Consensus       402 L~~~gi~~g~~lt~~~p~~~~~lmi~~TEt~sk~dlD~~v~al~eil  448 (449)
T PRK00451        402 LLEKGILGGYDLGRYYPELGNSLLVAVTELRTKEDIDALVEALGEVL  448 (449)
T ss_pred             HHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             99769978988544277889979997078999999999999999986


No 160
>PRK08466 consensus
Probab=99.15  E-value=3.2e-07  Score=65.29  Aligned_cols=319  Identities=10%  Similarity=0.058  Sum_probs=165.9

Q ss_pred             CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-----C-CCCC-EE
Q ss_conf             96899998632103653289--88999999999999999688998579997487348999875320-----5-7897-07
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-----L-GYRG-VD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-----~-~~~~-~~   94 (391)
                      +|+ |.+++.+++-...|-+  .-..+...+.-++|.+++  |.+..-+++..|||.|+|+++.=-     . +.+. .+
T Consensus        64 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~f~~sGseA~E~AiKlAr~y~~~~g~~k~~i  140 (430)
T PRK08466         64 NPY-INEAIKKQIDELEHVILAGFTHEPIIKLSERLCELT--PRGLNKCFYADNGSSAIEVALKMSFHYHKNKGKKKSLF  140 (430)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             799-999999999657773457758779999999999857--88778799837719999999999999975226897589


Q ss_pred             EEEECCHHHHHHHHHHHCCCC----------CEEEEEC--CCCCC---CCHHHCC-----CCCCEEEEEEEC-C--C-CE
Q ss_conf             997073688888765323876----------3067405--77765---7867678-----556579974202-4--2-02
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLSLQ----------DVREFTA--PYGSL---PDFSKVD-----FDRDVVFVWNGT-T--S-GV  150 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~~~----------~~~~~~~--~~g~~---~~~~~~~-----~~~~v~~~h~ET-s--t-Gv  150 (391)
                      +...++|=++...-.. ..+.          .......  |.+..   .+++.++     ....++.+-.|. .  . |+
T Consensus       141 is~~~~yHG~T~ga~s-~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~l~~~l~~~~~~iAAvI~EPiiqg~gg~  219 (430)
T PRK08466        141 LSLSNSYHGETLGALS-VGDVALYKDTYKPLLLECLQTPVPKDDEAYQEALEALKRILEKHAEEICAFILEPLVQCAGNM  219 (430)
T ss_pred             EEECCCCCCCCHHHHC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
T ss_conf             9964752688521102-578400246778877686115899971667888999999998589977799997876677997


Q ss_pred             EECC------EEEECCCCCCEEEEEECCHHHHCCCC-----CCCC--EEEEECCHHCCCCC-CCCEEEEECHHHHHHHHH
Q ss_conf             2032------03502568614886401101102545-----5685--79997001200176-651544567788876541
Q gi|254780153|r  151 CVPD------VGFIPESREGLVICDATSAVFARHID-----FNKL--DVVTFSAQKVLGGE-AGFGIIILSPASVERLEK  216 (391)
Q Consensus       151 ~~~~------~~~~~~~~~~llivD~vSs~g~~p~d-----~~~i--Dv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~  216 (391)
                      ..+.      ...+|+.+++++|+|=|.+=.++-=.     ..++  |++  ..-|+|++= .=++.++.+++..+....
T Consensus       220 ~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PDiv--~~gK~l~gG~~Pisav~~~~ei~~~~~~  297 (430)
T PRK08466        220 HMYSAEYLKEAIKLCHKYNIHIIFDEIAVGFGRTGTMFALEQCGISPDFL--CLSKGITGGYLPLSVVLTSDEIYNAFYA  297 (430)
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCEE--EECCCCCCCCCCEEEEEECHHHHHHHHC
T ss_conf             68988999999999853596688731011787667620554169999889--8684101788774999985899987505


Q ss_pred             CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r  217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL  296 (391)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~  296 (391)
                        +...             ......++|+.-=| ....+..++|+.+++++    ...+.+++.+.+.+.++... -.+.
T Consensus       298 --~~~~-------------~~~~~h~~T~~Gnp-la~aaala~L~~l~~~~----l~~~~~~~g~~l~~~L~~l~-~~~~  356 (430)
T PRK08466        298 --PYEE-------------NKAFLHSHSYTGNA-LACAAANATLDIFEDEN----VIEKNQILSEFIQKELSRLE-KLDF  356 (430)
T ss_pred             --CCCC-------------CCCEECCCCCCCCH-HHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHH-CCCC
T ss_conf             --6555-------------66601265788897-99999999999999688----88999999999999999862-4997


Q ss_pred             CCCCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             688200365317-8982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r  297 AVDETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       297 ~~~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      +.  +.|..... .+.+.+..       ........+...+.++|+++..     .++.+|+.--=.++.+||+..+++|
T Consensus       357 v~--~vRg~Gl~~~iel~~~~-------~~~~~~~~i~~~~l~~Gll~~~-----~g~~l~~~PpL~it~eeid~~~~~l  422 (430)
T PRK08466        357 VG--NLRQCGMVFAFELLGTD-------TKERVGLFVFQKALKKGLLLRP-----LGNTIYFMPPYIITKEEIKKVIEVL  422 (430)
T ss_pred             EE--EEEECCEEEEEEEECCC-------CCHHHHHHHHHHHHHCCEEEEC-----CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             57--88412538999984588-------5037999999999978938911-----4999999798588999999999999


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q gi|254780153|r  376 RWVFYFQK  383 (391)
Q Consensus       376 e~~~~~~k  383 (391)
                      |.+++++|
T Consensus       423 ~~al~elk  430 (430)
T PRK08466        423 EEIIKELK  430 (430)
T ss_pred             HHHHHHHC
T ss_conf             99999739


No 161
>PRK06149 hypothetical protein; Provisional
Probab=99.14  E-value=2.6e-07  Score=65.85  Aligned_cols=321  Identities=14%  Similarity=0.041  Sum_probs=171.7

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---CCCCCEEEEEECC
Q ss_conf             9689999863210365328988999999999999999688998579997487348999875320---5789707997073
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---LGYRGVDVLAWES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~~~~~~~~~~~g~  100 (391)
                      +|+ |.+++++++--.+|-+--..+-+.+.-++|..++  |+.-..+|+..|||.|.|+++.=.   .+..+.+...+++
T Consensus       601 hP~-v~~A~~~Q~~~L~~~s~~~~~~~~elAerL~~~~--P~~l~~vfF~nSGsEAnE~AlKlAr~~tGr~~iI~~~~ay  677 (972)
T PRK06149        601 HPR-MAAAAARQWSLLNTNSRFHYAAVAEFSERLAALA--PDGLDTVFLVNSGSEANDLAIRLAWAASGGRDVLSVLEAY  677 (972)
T ss_pred             CHH-HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             999-9999999999745176636515999999999857--6562669850774999999999999962899779996870


Q ss_pred             HHHHHHHHHHHCC------C----C-CEEEEECCCCCC-----CC-----HHH-------CC-CCCCEEEEEEECCCCE-
Q ss_conf             6888887653238------7----6-306740577765-----78-----676-------78-5565799742024202-
Q gi|254780153|r  101 FGLGWMSDIRQLS------L----Q-DVREFTAPYGSL-----PD-----FSK-------VD-FDRDVVFVWNGTTSGV-  150 (391)
Q Consensus       101 ~~~r~~~~~~~~~------~----~-~~~~~~~~~g~~-----~~-----~~~-------~~-~~~~v~~~h~ETstGv-  150 (391)
                      .|.-.........      +    . .+.....|...-     .+     ...       +. ....++.+-.|+..|. 
T Consensus       678 HG~T~ga~a~s~~~~~~~~~~~~~p~~v~~~~~P~~yr~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~Aa~I~EPI~G~g  757 (972)
T PRK06149        678 HGWTVATDAVSTSIADNPQALTTRPDWVHPVESPNTFRGKFRGADSAADYLRDVVAQLEDLDARGRQLAGFICEPVYGNA  757 (972)
T ss_pred             CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf             88267889863343457667678998436606874456777886407899999999999997158966899995764777


Q ss_pred             --EECC------EEEECCCCCCEEEEEECCHHHHCCCC-CC-----CC--EEEEECCHHCCCCCCCCEEEEECHHHHHHH
Q ss_conf             --2032------03502568614886401101102545-56-----85--799970012001766515445677888765
Q gi|254780153|r  151 --CVPD------VGFIPESREGLVICDATSAVFARHID-FN-----KL--DVVTFSAQKVLGGEAGFGIIILSPASVERL  214 (391)
Q Consensus       151 --~~~~------~~~~~~~~~~llivD~vSs~g~~p~d-~~-----~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~  214 (391)
                        ..+.      ...+|.++|.++|+|=|++=.++-=. +|     ++  |++  ..-|.||+===+|.++.+++..+..
T Consensus       758 G~i~~P~gyl~~v~~~c~~~g~LlI~DEVQtG~GRtG~~Fwa~e~~gv~PDIv--t~aKglg~G~PlgAvv~~~eia~~f  835 (972)
T PRK06149        758 GGISLPDGYLRQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGNGHPLGAVITRREIAEAL  835 (972)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEE--EECCCCCCCCCCEEEEECHHHHHHH
T ss_conf             87379879999999999974978996132217785766300445429998779--8645555886647889749999765


Q ss_pred             HHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             41144577831232001123210334786446664488999999998620103189999999977999999987479716
Q gi|254780153|r  215 EKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE  294 (391)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~  294 (391)
                      .   ..                  ...++|+.--|+ ...+...+|+.|++++    ..++.++..+.+.+.+.++..-.
T Consensus       836 ~---~~------------------g~~~sTfgGnPl-acAaalavL~vi~~e~----L~~na~~~G~~l~~~L~~L~~~~  889 (972)
T PRK06149        836 E---AE------------------GYFFSSTGGSPV-SCAIGMAVLDVMREEK----LQENARRVGDHLKARLEALVDRH  889 (972)
T ss_pred             C---CC------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             2---68------------------860058998989-9999999999998736----99999999999999999998619


Q ss_pred             CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             76688200365317898247310113734567888999998886282872665567675056861588899999999999
Q gi|254780153|r  295 NLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDW  374 (391)
Q Consensus       295 ~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~a  374 (391)
                      +.+.+-.-++.+.-.=.+.|+....-..    .....+...+.++|++++..|.  -.+.+||---=.++.++++.++++
T Consensus       890 p~IgdVRG~GLm~GiElV~d~~t~~Pa~----~~~~~i~~~~~e~Gil~~~~G~--~~nVlki~PPL~i~~e~~D~~l~~  963 (972)
T PRK06149        890 PLAGAVHGMGLYLGVELVRDRQTLEPAT----EETAAICDRLLELGVIMQPTGD--HLNILKIKPPLCTDRESADFFVDM  963 (972)
T ss_pred             CCEEEEECCCCEEEEEEECCCCCCCCCH----HHHHHHHHHHHHCCEEEECCCC--CCCEEEECCCCCCCHHHHHHHHHH
T ss_conf             9489862267289999701667689888----9999999999978958942789--888799808946769999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780153|r  375 LRWVFYF  381 (391)
Q Consensus       375 Le~~~~~  381 (391)
                      ||.++.+
T Consensus       964 l~~vL~E  970 (972)
T PRK06149        964 LDRVLTE  970 (972)
T ss_pred             HHHHHHC
T ss_conf             9999855


No 162
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.14  E-value=7.9e-07  Score=62.81  Aligned_cols=323  Identities=16%  Similarity=0.114  Sum_probs=171.0

Q ss_pred             CCCCCC-CCCCCHHHHHHHHHHHC---CCCCCC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             886888-77689689999863210---365328--988999999999999999688998579997487348999875320
Q gi|254780153|r   14 PFFSSG-PCAKRPGWSLGILEGAL---LGRSHR--CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL   87 (391)
Q Consensus        14 ~~F~pG-P~~~~p~~v~~~~~~~~---l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl   87 (391)
                      .+|+-| |.--+|..+.+++...-   .++++-  .++..+.+.+   .+++ ++++-+-+=++++.|++.++..++..+
T Consensus        33 i~l~iG~Pd~~~P~~~~~a~~~~~~~~~~Y~~~~G~~~LReaia~---~~~~-~g~~~~~d~I~iT~Ga~~al~~~~~~l  108 (396)
T PRK07568         33 YHLNIGQPDIKTPEVFFEAIRNYDEEVLAYSHSAGIDSLREAFSK---YYKR-FNIDFDKDEIIVTNGGSEAILFALMAI  108 (396)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH---HHHH-HCCCCCHHEEEECCCHHHHHHHHHHHH
T ss_conf             888798899987699999998507378988998671999999999---9998-688988222898578069999999972


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC--CCCC-CCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf             57897079970736888887653238763067405--7776-578676785-----565799742024202203203---
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA--PYGS-LPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG---  156 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~--~~g~-~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~---  156 (391)
                      +++||.+++..=.|... . ...+..+..+..+..  +.|. .+++++++.     .+.+.++.-..-||...+...   
T Consensus       109 ~~pGD~Vlv~~P~y~~y-~-~~~~~~g~~~v~v~~~~e~g~~lp~~~~l~~~~~~~tk~ii~~~P~NPTG~v~s~~~~~~  186 (396)
T PRK07568        109 CDPGDEIIVPEPFYANY-N-GFATSAGVKIVPVTTKIEEGFHLPKKEEIEKLITDKTKAILISNPGNPTGVVYTKEELRQ  186 (396)
T ss_pred             CCCCCEEEEECCCCCCH-H-HHHHHCCCEEEECCCCHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             79989899938975325-9-999984987851676721188789699999747765749985899298875401578999


Q ss_pred             --EECCCCCCEEEEEECCHH---HHCC-C---CCC---CCEEEEECCHHCCCCCCCCEE--EEEC-HHHHHHHHHCCCCC
Q ss_conf             --502568614886401101---1025-4---556---857999700120017665154--4567-78887654114457
Q gi|254780153|r  157 --FIPESREGLVICDATSAV---FARH-I---DFN---KLDVVTFSAQKVLGGEAGFGI--IILS-PASVERLEKYVPSW  221 (391)
Q Consensus       157 --~~~~~~~~llivD~vSs~---g~~p-~---d~~---~iDv~~a~sQK~l~~ppGl~~--v~~s-~~al~~~~~~~~~~  221 (391)
                        .+|..++.++|.|-+=+-   .+.+ .   ...   +--+.+.|.-|.+ ++||+=+  ++.. +...+....     
T Consensus       187 l~~la~~~~~~ii~De~Y~~l~y~g~~~~s~~~~~~~~~~vI~i~S~SK~~-~~~G~RiG~~v~~~~~~~~~~~~-----  260 (396)
T PRK07568        187 LADIAKEHDLFLISDEVYREFTYDGLKYTSAMNIEGIEDRVIIIDSVSKRY-SACGARIGSLITKNKELIKQAMK-----  260 (396)
T ss_pred             HHHHHHHHCEEEECCCCHHHHEECCCCCCCHHCCCCCCCCEEEECCCCCCC-CCCHHHEEEEECCCHHHHHHHHH-----
T ss_conf             999998710667424535552208987757200556544225640455665-78405435553099999999999-----


Q ss_pred             CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                .         .++...+|+..-++...+|+.-  +.-++.+.+.++++.+.+.+.+++.+++....++  
T Consensus       261 ----------~---------~~~~~~~~~~~Q~aa~~~l~~~--~~~~~~~~~~y~~rrd~~~~~L~~~~g~~~~~P~--  317 (396)
T PRK07568        261 ----------L---------CQARLCPPTLEQIGAAALLNTP--ESYFKEVREEYEKRRDILYEGLNKIPGVVCEKPT--  317 (396)
T ss_pred             ----------H---------HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC--
T ss_conf             ----------7---------1214789779999999998587--7999999999999999999999707997867888--


Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH--HHHCCEEECCCC--CCC--CCCE-EEEECCCCCCHHHHHHHHHH
Q ss_conf             0365317898247310113734567888999998--886282872665--567--6750-56861588899999999999
Q gi|254780153|r  302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF--LEKEEIAYDIGS--YRD--APLG-LRVWVGVTVEKEDLLLLCDW  374 (391)
Q Consensus       302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~--~r~--~~~~-~RIg~~g~i~~~dv~~L~~a  374 (391)
                        +..-+-.+++..     +   ...+...+.+-  +..+++++--|.  |..  .|++ +|++.  ..++++++.-++.
T Consensus       318 --Ggfyl~~~lp~~-----~---~~~f~~~ll~~~~~~~~~V~v~PG~~F~~~~g~g~~~iRls~--~~~~e~l~ea~~R  385 (396)
T PRK07568        318 --GAFYIIAKLPVD-----D---AEDFAKWMLTDFEYNGETVMVAPASGFYATPGLGKDEIRIAY--VLEKEDLRRAMEI  385 (396)
T ss_pred             --EEEEEEEECCCC-----C---HHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCEEEEEE--CCCHHHHHHHHHH
T ss_conf             --578999958999-----9---999999999962124886999776341689989999699997--1999999999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780153|r  375 LRWVFYFQK  383 (391)
Q Consensus       375 Le~~~~~~k  383 (391)
                      |+.++++-|
T Consensus       386 l~~~l~~~~  394 (396)
T PRK07568        386 LKKALEAYN  394 (396)
T ss_pred             HHHHHHHHC
T ss_conf             999999852


No 163
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.14  E-value=5.6e-09  Score=76.46  Aligned_cols=304  Identities=17%  Similarity=0.129  Sum_probs=165.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+-+...   .+ ..+||-+|..+++++++++|+.+++...-||.  ++........+.+++.+
T Consensus        62 gnPT~~~lE~~l---a~LEg~~~---a~-~~sSGmaAis~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~v  134 (431)
T PRK08248         62 MNPTNDVFEKRI---AALEGGVG---AL-AVSSGQAAVTYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFV  134 (431)
T ss_pred             CCHHHHHHHHHH---HHHHCCCC---EE-EECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             886799999999---99839984---89-954699999999999737799899727864888999874232388799998


Q ss_pred             ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEECCE---E--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             05777657867678--556579974202420220320---3--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVPDV---G--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~~~---~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     ++++++  .....-+++.||.+--...+.   .  .+++.+++++|||-+  |-+...|++. ++|+++-|.
T Consensus       135 D~~-----d~~~~~~~i~~~Tkli~~EsPsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~  208 (431)
T PRK08248        135 DPS-----DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVADIAHRHHIPLIVDNTFASPYLLRPIEF-GADIVVHSA  208 (431)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHCCHHHH-CCCEEEEEC
T ss_conf             997-----75779975377745999604899987422789999999776985998667530321583452-898899966


Q ss_pred             HHCCCCCCCC--EEEEECHHH-HHHH---HHCCCCCCCCCHHHC--C---------HHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             1200176651--544567788-8765---411445778312320--0---------112321033478644666448899
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPAS-VERL---EKYVPSWPLPKIFRM--V---------KGGRVMEGLFCGETINTPSLLCIE  254 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~a-l~~~---~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~TP~v~~i~  254 (391)
                      -|-++|-+-+  |+|+.+.+. |...   .....+  .+.+..+  .         ...+.......|.   +++-+.-|
T Consensus       209 TKYi~GHsDvlgG~vv~~~~~~w~~~~r~~~~~~~--d~~~~~~~~~~~~g~~~~~~~~r~~~~~~~G~---~~sp~da~  283 (431)
T PRK08248        209 TKFIGGHGTSIGGVIVDSGKFDWAGSGKFPGLTEP--DPSYHGLVYTDAVGEAAYITKARVQLLRDLGA---ALSPFNAF  283 (431)
T ss_pred             CEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC--CHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC---CCCHHHHH
T ss_conf             51236887535479970675440002345323578--65533532687661789999999999985277---78806779


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCCC--------CC-CCEEEEEECCCCCCCC
Q ss_conf             99999986201031899999999779999999874797167-----6688200--------36-5317898247310113
Q gi|254780153|r  255 DYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-----LAVDETT--------RS-NTSICMKIVDSDIASL  320 (391)
Q Consensus       255 al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-----~~~~~~~--------rS-~~~v~~~~~d~~~~~~  320 (391)
                      .+...|      ..+.-|.+||.+++..+-+|+++++....     +...|.+        ++ -..++|.+.+..    
T Consensus       284 L~lRGL------rTL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~~g~G~~~sf~l~~~~----  353 (431)
T PRK08248        284 LLLQGL------ETLHLRMERHSENALAVAKFLEEHPAVESVSYPGLPSHPSYELAKKYLPKGQGAILTFEIKGGV----  353 (431)
T ss_pred             HHHCCC------CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH----
T ss_conf             997268------9799999999988999999998489957798999999958999998679996069999972889----


Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------C-CEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             7345678889999988862828726655676----------------------7-5056861588899999999999999
Q gi|254780153|r  321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------P-LGLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~-~~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                        +.    ...+...|.--..+..+|+..+.                      . .-+|+++|    .||++.|++=|+.
T Consensus       354 --~~----~~~f~~~L~lf~~a~SlGg~eSLi~~pa~~th~~~~~~~r~~~Gi~~~liRlSVG----lEd~eDLi~DL~q  423 (431)
T PRK08248        354 --EA----GKKLIDSVKLFSHLANVGDSKSLIIHPASTTHEQLSEEEQRAAGVTPGLVRLSVG----TESIDDIIEDLRQ  423 (431)
T ss_pred             --HH----HHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHH
T ss_conf             --99----9999983783611326676571645764355210899999866979495999941----0999999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780153|r  378 VFYFQKI  384 (391)
Q Consensus       378 ~~~~~k~  384 (391)
                      |+.++++
T Consensus       424 AL~~a~~  430 (431)
T PRK08248        424 AIEQSQA  430 (431)
T ss_pred             HHHHHCC
T ss_conf             9997237


No 164
>PRK06062 hypothetical protein; Provisional
Probab=99.14  E-value=1.4e-07  Score=67.58  Aligned_cols=327  Identities=12%  Similarity=0.089  Sum_probs=165.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC--CCCCCEEEEEECC
Q ss_conf             96899998632103653289889-99999999999999688998579997487348999875320--5789707997073
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL--LGYRGVDVLAWES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl--~~~~~~~~~~~g~  100 (391)
                      +|+ |.+++.+++-...|-++.| .+...+.-+.|.+++  |.+..-+++..||+.++|+++.=.  ...+..++...++
T Consensus        54 ~p~-i~~Ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~--p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~  130 (434)
T PRK06062         54 HPK-VVAAIQEQAARLCTVAPAHANDARSEAARLIAERA--PGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRS  130 (434)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             799-99999999975476467524599999999999747--777587998378438999999999985299837664046


Q ss_pred             HHHHHHHHHHHC----------CCCCEEEEECCC------CCCCC-------HHHC------CCCCCEEEEEEECCCC--
Q ss_conf             688888765323----------876306740577------76578-------6767------8556579974202420--
Q gi|254780153|r  101 FGLGWMSDIRQL----------SLQDVREFTAPY------GSLPD-------FSKV------DFDRDVVFVWNGTTSG--  149 (391)
Q Consensus       101 ~~~r~~~~~~~~----------~~~~~~~~~~~~------g~~~~-------~~~~------~~~~~v~~~h~ETstG--  149 (391)
                      |=++...-..--          ....+.....|.      ....+       ++.+      +....++.+-.|...|  
T Consensus       131 yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~~iAAvivEPiqg~g  210 (434)
T PRK06062        131 YHGGTGTAINLTGDPRRWPNDTGNAGVVHFFGPFLYRSSFHATTEEEECERALAHLERVIALEGPSTIAAIVLESVPGTA  210 (434)
T ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
T ss_conf             67886520784068201468888899534158876676677888689999999999999985199977999947867889


Q ss_pred             -EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHH
Q ss_conf             -22032------035025686148864011011025---4--5568579997001200176-651544567788876541
Q gi|254780153|r  150 -VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEK  216 (391)
Q Consensus       150 -v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~  216 (391)
                       +..+.      .+.+|+++++++|+|=|.+=.++-   +  +..++.-.+...-|+|++= .=++.++.+++..+....
T Consensus       211 G~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~e~~gv~PDiv~~gK~l~gG~~Plsav~~~~~i~~~~~~  290 (434)
T PRK06062        211 GIMVPPPGYLAGVRELCDRHGIVFIADEVMAGFGRTGKWFAIEHFDVVPDLITFAKGVNSGYVPLGGVAISEAIADTFAD  290 (434)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHCCCCCCEEEEEECHHHHHHHCC
T ss_conf             98668767876899999985950674643227876666421005897976210103314887761788745999987422


Q ss_pred             CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH-HH-HHHHHHHHHHHCCCCC
Q ss_conf             144577831232001123210334786446664488999999998620103189999999-97-7999999987479716
Q gi|254780153|r  217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERC-NA-NAAVLFQFIQENDWIE  294 (391)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~-~~-~a~~l~~~i~~~~~~~  294 (391)
                          ..                ...++|+.--|+ ...+...+|+.++++ ++-...++. ++ ..+.+.+..+++    
T Consensus       291 ----~~----------------~~~g~T~~Gnpl-a~Aaa~a~L~~i~~~-~l~~~~~~~G~~~l~~~L~~l~~~~----  344 (434)
T PRK06062        291 ----RP----------------YPGGLTYSGHPL-ACAAAVATINAMEEE-GIVENAARIGAEVLGPGLRELAERH----  344 (434)
T ss_pred             ----CC----------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_conf             ----67----------------567878889879-999999999999735-8999999999999999999998658----


Q ss_pred             CCCCCCCCCCCCEEEEEECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf             7668820036531789824731011373--45678889999988862828726655676750568615888999999999
Q gi|254780153|r  295 NLAVDETTRSNTSICMKIVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLC  372 (391)
Q Consensus       295 ~~~~~~~~rS~~~v~~~~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~  372 (391)
                      +.+.+-.-++.+.-.-.+.++.......  .........+...+.+.|++....     ++.+|+.--=.++.+||+..+
T Consensus       345 p~v~~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-----gn~irl~PpL~it~~eid~~l  419 (434)
T PRK06062        345 PSVGEVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGL  419 (434)
T ss_pred             CCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----CCEEEEECCCCCCHHHHHHHH
T ss_conf             986888616626999982264435555544332799999999999799278335-----998999789238899999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  373 DWLRWVFYFQKI  384 (391)
Q Consensus       373 ~aLe~~~~~~k~  384 (391)
                      +.||.++..+-+
T Consensus       420 ~~l~~al~~~~a  431 (434)
T PRK06062        420 AILDAALAVADA  431 (434)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999998765


No 165
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.13  E-value=1.6e-07  Score=67.20  Aligned_cols=283  Identities=18%  Similarity=0.153  Sum_probs=159.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH--HHHHHHCCCCCEEEE
Q ss_conf             988999999999999999688998579997487348999875320578970799707368888--876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW--MSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~--~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++.   |..+=+..   .+ +..+||-+|+.+++++++++|+.+++...-||.-+  ........+.+++.+
T Consensus        59 ~nPT~~~lE~~---la~LEg~~---~a-~~~sSGmaAi~~~ll~~l~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~~~~v  131 (391)
T PRK08133         59 TNPTVRMFQER---LAALEGAE---AC-VATASGMAAILSVVMALLQAGDHVVSSRSLFGSTLSLFEKIFARFGIETTFV  131 (391)
T ss_pred             CCHHHHHHHHH---HHHHHCCC---EE-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEC
T ss_conf             88669999999---99980997---59-9965889999999998457999899678974538999998741078444467


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--565799742024202203---203--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +.     .+++.++.  .+...+++.||.+--...   +..  .+++++++++|||-+  +-+...|++ .++|+++-|.
T Consensus       132 d~-----~d~~~~~~ai~~~T~lv~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~atP~~~~Pl~-~GaDivvhS~  205 (391)
T PRK08133        132 DL-----TDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPLK-LGADVVIHSA  205 (391)
T ss_pred             CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHH-HCCCEEEEEC
T ss_conf             98-----79999997458784599997899998665553999999875587599878976524446566-1883799966


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|-|+|-.-+  |.|+.+++.+.+.  .         ..+   ..     ..|.   +++-+.-|.+...|      ..+
T Consensus       206 TKyi~GHsD~lgG~v~~~~~~~~~~--~---------~~~---~~-----~~G~---~lsP~~a~l~lrGL------~TL  257 (391)
T PRK08133        206 TKYLDGQGRVLGGAVVGSKEFIMEE--V---------FGF---LR-----TAGP---TLSPFNAWVFLKGL------ETL  257 (391)
T ss_pred             CCEECCCCCCEEEEEECCHHHHHHH--H---------HHH---HH-----HCCC---CCCCHHHHHHHCCC------CCH
T ss_conf             6030488874448996367999999--9---------999---99-----7488---88932778986047------769


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      .-|.+||.+++..+-+|+++++.....     ...|.+        -....++|.++...      +...    .+...+
T Consensus       258 ~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~r~~~g~Gg~~sf~l~g~~------~~~~----~f~~~l  327 (391)
T PRK08133        258 SLRMEAHSANALELAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGR------EAAW----RVIDAT  327 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCH------HHHH----HHHHHC
T ss_conf             999999999999999999709991479899998997778999708999725899971999------9999----999828


Q ss_pred             HHCCEEECCCCCCCC----------------------CCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             862828726655676----------------------750-56861588899999999999999999
Q gi|254780153|r  337 EKEEIAYDIGSYRDA----------------------PLG-LRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       337 ~~~g~~~~~~~~r~~----------------------~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      .--..+..+|+.++.                      ..+ +|++++=    ||++.|++=|+.|+.
T Consensus       328 ~l~~~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~GI~~~liRlSVGl----Ed~~DLi~Dl~qAL~  390 (391)
T PRK08133        328 RLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADLKADLARGLA  390 (391)
T ss_pred             CCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHC
T ss_conf             846561352773012267511345438999998669894959999610----999999999999867


No 166
>PTZ00125 ornithine aminotransferase; Provisional
Probab=99.13  E-value=9.2e-08  Score=68.74  Aligned_cols=311  Identities=14%  Similarity=0.076  Sum_probs=169.7

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------C--CCC-
Q ss_conf             96899998632103653289889-999999999999996889985799974873489998753205-------7--897-
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------G--YRG-   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~--~~~-   92 (391)
                      +|+ |.+++.+++-...|-+..| ......+.+.+..+.+.   .+| ++..|||.+.|+++.=..       +  ++. 
T Consensus        67 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~a~~~l~~~~g~---~~v-~f~~SGsEA~e~AiklAr~~~~~~~~~~~~r~  141 (415)
T PTZ00125         67 HPK-ILEALINQAKKLTLSSRAFYNQKLGEAEKYITNLFGY---DKV-LFMNTGAEANETAVKFARRWGYAVKGIPENQA  141 (415)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC---CEE-EECCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf             799-9999999996578776753458999999999855499---889-95387588999999999898774167778960


Q ss_pred             EEEEEECCHHHHHHHHHHHCCCCC---------EEEEECCCCCCCCHHH-CCCCCCEEEEEEECCCC---EEECC-----
Q ss_conf             079970736888887653238763---------0674057776578676-78556579974202420---22032-----
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSLQD---------VREFTAPYGSLPDFSK-VDFDRDVVFVWNGTTSG---VCVPD-----  154 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~-~~~~~~v~~~h~ETstG---v~~~~-----  154 (391)
                      .++...++|-++...-...-+...         ......|+.....+++ ++....++.+-.|...|   +..|.     
T Consensus       142 ~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~~~iAAviiEPi~g~gG~~~p~~~yl~  221 (415)
T PTZ00125        142 KIIFCNGNFSGRTMGAISASDDPKSYNKFGPFVPGFHKVDYNDLEALEKLLSKDPNVCAFIVEPIQGEAGVIVPDEGYLK  221 (415)
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHH
T ss_conf             59997388688844543344574334577888897077046768999999604997689997465687884269999999


Q ss_pred             -EEEECCCCCCEEEEEECCHHHHCCC-----CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf             -0350256861488640110110254-----5568579997001200176-65154456778887654114457783123
Q gi|254780153|r  155 -VGFIPESREGLVICDATSAVFARHI-----DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIF  227 (391)
Q Consensus       155 -~~~~~~~~~~llivD~vSs~g~~p~-----d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~  227 (391)
                       ...+|+.+++++|+|-|.+-.++-=     +..++.=.+...-|+|++= .=++.++.+++..+...   +        
T Consensus       222 ~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Plsav~~~~~i~~~~~---~--------  290 (415)
T PTZ00125        222 QVYSLCKKYNVLLVADEVQTGLGRTGKLLAVDHEGVKPDIVLLGKALSGGHLPISAVLANDDVMLTIK---P--------  290 (415)
T ss_pred             HHHHHHHHHCCEEECCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCHHHHHHCC---C--------
T ss_conf             99999998487676452241677567621201789799821003144688776203533499996326---8--------


Q ss_pred             HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf             20011232103347864466644889999999986201031899999999779999999874797167668820036531
Q gi|254780153|r  228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTS  307 (391)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~  307 (391)
                                 ...++|+.--|+ ...+..++|+.+++++    ..++.+++.+.+.+.+..+. -.+.+.  +.|....
T Consensus       291 -----------~~h~~T~~gnpl-a~Aaa~a~L~~i~~~~----l~~~v~~~G~~l~~~L~~L~-~~p~v~--~VRG~Gl  351 (415)
T PTZ00125        291 -----------GEHGSTYGGNPL-AAAVCKEALEVLSEEK----LAENAQKLGKYFRKGLKKLK-KSPIVE--IVRGKGL  351 (415)
T ss_pred             -----------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHH-CCCCEE--EEECCCE
T ss_conf             -----------998889981899-9999999999998646----99999999999999999874-699769--8700781


Q ss_pred             EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             78-9824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      .. +.+.++.         .....++...+.++|+++...+    ...+|+.--=.++.++++.+++.||.++++.
T Consensus       352 ~~giel~~~~---------~~~~~~i~~~~~~~Gll~~~~g----~~vir~~PPL~it~~eid~~l~~l~~aL~~l  414 (415)
T PTZ00125        352 LNAIQFDPNV---------SNVAWDICLKFKENGLLCKPTH----DDIIRLTPPLTITKEQLDQCLLIIKKVLKSF  414 (415)
T ss_pred             EEEEEEECCC---------CHHHHHHHHHHHHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             9999985797---------6589999999995996996079----9989998993389999999999999999961


No 167
>PRK07777 aminotransferase; Validated
Probab=99.13  E-value=3.8e-07  Score=64.84  Aligned_cols=324  Identities=14%  Similarity=0.039  Sum_probs=174.6

Q ss_pred             CCCCCCCCCCC-CCCCCHHHHHHHHHHHCCCCCCC-CH--HHHHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHH
Q ss_conf             68998886888-77689689999863210365328-98--89999999999999996889985--799974873489998
Q gi|254780153|r    9 RKPKRPFFSSG-PCAKRPGWSLGILEGALLGRSHR-CV--LGKERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEM   82 (391)
Q Consensus         9 ~~p~~~~F~pG-P~~~~p~~v~~~~~~~~l~~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea   82 (391)
                      ..|.-+||+-| |---.|..+++++.+.+-+-.|+ ++  =..++-+.+-+.+++-+++.-+-  +| +++.|++.++..
T Consensus        22 ~~~~~I~l~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~pe~eI-~vt~Ga~~al~~  100 (386)
T PRK07777         22 VRTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIAPLRAAIAAQRRRRYGLEYDPDTEV-LVTVGATEAIAA  100 (386)
T ss_pred             CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHH
T ss_conf             7999889499789985689999999999862899779987649999999999999819999998809-987787999999


Q ss_pred             HHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEE--EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCE
Q ss_conf             7532057897079970736888887653238763067--4057776578676785-----56579974202420220320
Q gi|254780153|r   83 ALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVRE--FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDV  155 (391)
Q Consensus        83 ~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~  155 (391)
                      ++.-|+.+||.+++..=.|-.-. ..+...+...+.+  .....+..+++++++.     .+.+.++.-..-||...+..
T Consensus       101 ~~~~l~~pGD~Vlv~~P~y~~y~-~~~~~~g~~~v~vpl~~~~~~~~~d~~~l~~~~~~~tk~iil~~P~NPTG~v~s~e  179 (386)
T PRK07777        101 AVLGLVEPGDEVLLIEPYYDSYA-AVIAMAGAHRVAVPLVPDGRGFALDVDALRAAVTPRTRALIVNSPHNPTGTVLSAA  179 (386)
T ss_pred             HHHHHCCCCCEEEECCCCCCCHH-HHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHH
T ss_conf             99996489987763499778769-99998389256134347788846696999974687776999799969888488899


Q ss_pred             EE-----ECCCCCCEEEEEECCHHH---HCC---C---C-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCC
Q ss_conf             35-----025686148864011011---025---4---5-56857999700120017665--154456778887654114
Q gi|254780153|r  156 GF-----IPESREGLVICDATSAVF---ARH---I---D-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYV  218 (391)
Q Consensus       156 ~~-----~~~~~~~llivD~vSs~g---~~p---~---d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~  218 (391)
                      +.     +|.+++.++|.|-+=+..   +.+   +   + ...-.+.+.|.-|.++ .||  +|.++..++.+++....+
T Consensus       180 ~l~~l~~la~~~~i~ii~DE~Y~~l~f~~~~~~~~~~~~~~~~~~i~i~S~SK~~~-~~G~R~G~~v~~~~li~~~~~~~  258 (386)
T PRK07777        180 ELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMAERTVTISSAAKTFN-VTGWKIGWACGPAPLIAAVRAAK  258 (386)
T ss_pred             HHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHH
T ss_conf             99999999864297886575377522688777736546786576024316667667-76622599985899999999999


Q ss_pred             CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             45778312320011232103347864466644889999999986201031899999999779999999874797167668
Q gi|254780153|r  219 PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAV  298 (391)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~  298 (391)
                      .            +           +-...+...-++...+|..-  +.-++.+.+.++++.+.+.+.+...+ +....+
T Consensus       259 ~------------~-----------~~~~~~~~~Q~a~~~al~~~--~~~~~~~~~~~~~rrd~~~~~L~~~g-~~~~~p  312 (386)
T PRK07777        259 Q------------Y-----------LTYVGGAPFQPAVAHALDHE--DAWVAALRDSLQAKRDRLAAGLAEAG-FAVHDS  312 (386)
T ss_pred             H------------H-----------CCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECC
T ss_conf             8------------6-----------36758658999999998687--59999999999999999999999769-887179


Q ss_pred             CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC--C--CCCCCE-EEEECCCCCCHHHHHHHH
Q ss_conf             82003653178982473101137345678889999988-86282872665--5--676750-568615888999999999
Q gi|254780153|r  299 DETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS--Y--RDAPLG-LRVWVGVTVEKEDLLLLC  372 (391)
Q Consensus       299 ~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~--~--r~~~~~-~RIg~~g~i~~~dv~~L~  372 (391)
                      +       -..+...+.....  .....    .+...| .+.|+++--|.  +  ...+++ +|++...  +++.++.-+
T Consensus       313 ~-------G~~f~~~~~~~~~--~~d~~----~f~~~L~~~~gV~v~PG~~F~~~~~~g~~~vRlsf~~--~~e~l~ea~  377 (386)
T PRK07777        313 A-------GTYFLCADPRPLG--YDDGT----AFCRALPERVGVAAIPMSAFCDPADAWNHLVRFAFCK--RDDTLDEAI  377 (386)
T ss_pred             C-------EEEEEEEECCCCC--CCCHH----HHHHHHHHHCCEEEECCHHHCCCCCCCCCEEEEEECC--CHHHHHHHH
T ss_conf             8-------2689988666689--99999----9999999868999988744288987789979999689--999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  373 DWLR  376 (391)
Q Consensus       373 ~aLe  376 (391)
                      +-|.
T Consensus       378 ~RL~  381 (386)
T PRK07777        378 RRLR  381 (386)
T ss_pred             HHHH
T ss_conf             9999


No 168
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.12  E-value=3.8e-08  Score=71.18  Aligned_cols=301  Identities=16%  Similarity=0.082  Sum_probs=159.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..|=+...   ++. .+||-+|..+++++++++|+.+++...-||.  +.+.......+.++...
T Consensus        61 gNPT~~~lE~~l---a~LEgg~~---a~~-~sSGmaAi~~~l~~ll~~Gd~vv~~~~~Yggt~~~~~~~l~~~Gi~v~~~  133 (426)
T PRK05994         61 TNPTTAVLEERV---AALEGGTA---ALA-VASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWA  133 (426)
T ss_pred             CCHHHHHHHHHH---HHHHCCCE---EEE-ECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEE
T ss_conf             886699999999---99859972---899-44889999999999727899899848742689999999986088699997


Q ss_pred             ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEE---CCE--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             05777657867678--556579974202420220---320--3502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCV---PDV--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~---~~~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.+.++  ..+...+++.||.+--..   ++.  ..+++++++++|||.+  |-+...|++. ++|+++-|.
T Consensus       134 d~~-----d~~~~~~~i~~~T~lv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT~atP~~~~Pl~~-GaDivvhS~  207 (426)
T PRK05994        134 DAD-----DPASFEAAITPRTKAIFIESIANPGGTITDIEAIAEVAHRAGLPLIVDNTLASPYLIRPIEH-GADIVVHSL  207 (426)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHHH-CCCEEEEEC
T ss_conf             899-----83889973688754999987899887234789999999971991786356520431586774-898899964


Q ss_pred             HHCCCCCCCCE--EEEEC-HHHHHHHHH---CCCCCCCCCHHHCCHHH-----------HHHCCCCCCCCCCCCCHHHHH
Q ss_conf             12001766515--44567-788876541---14457783123200112-----------321033478644666448899
Q gi|254780153|r  192 QKVLGGEAGFG--IIILS-PASVERLEK---YVPSWPLPKIFRMVKGG-----------RVMEGLFCGETINTPSLLCIE  254 (391)
Q Consensus       192 QK~l~~ppGl~--~v~~s-~~al~~~~~---~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~TP~v~~i~  254 (391)
                      -|-++|-.-+-  +|+-+ ..-|.+..+   .....  +.+-.+....           +.......|.   +++-+..|
T Consensus       208 TKyi~GHsDvlgG~vv~~g~~~w~~~~~~~~l~~~~--~~~~g~~~~~~~~~~~~~~~~r~~~lr~lG~---~lsP~da~  282 (426)
T PRK05994        208 TKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPR--PEYHGLVLHETFGNFAFAIAARVLGLRDLGP---AISPFNAF  282 (426)
T ss_pred             CCCCCCCCCEEEEEEECCCCCCHHHCCCCHHHCCCC--HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCHHHH
T ss_conf             510358876378888526520022124431223665--5645305987750578999999877541477---56816789


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CC-CCEEEEEECCCCCCCC
Q ss_conf             999999862010318999999997799999998747971676-----688200--------36-5317898247310113
Q gi|254780153|r  255 DYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RS-NTSICMKIVDSDIASL  320 (391)
Q Consensus       255 al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS-~~~v~~~~~d~~~~~~  320 (391)
                      .+...|      ..+.-|.+||.+++..+-+|+++++.....     ...|.+        .+ -.+++|.+.+..    
T Consensus       283 L~lRGL------~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~lak~~~~~g~G~~~Sf~l~g~~----  352 (426)
T PRK05994        283 LILTGI------ETLPLRMQRHSDNALAVAEWLSGHPKVSWVNYAGLPSDKYHALAQKYSPKGAGAVFTFGLKGGY----  352 (426)
T ss_pred             HHHCCC------CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH----
T ss_conf             997257------8389999999999999999996299978898989899803999998788997379999966979----


Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             7345678889999988862828726655676----------------------75-056861588899999999999999
Q gi|254780153|r  321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                        +...    .+...|.--..+..+|+..+.                      +. -+|++++    .||++.|++-|+.
T Consensus       353 --~~~~----~f~~~l~lf~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~eDLi~DL~q  422 (426)
T PRK05994        353 --EAGV----KLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLSDEQKVAAGAGPDVVRLSIG----IEDKDDIIADLEQ  422 (426)
T ss_pred             --HHHH----HHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHH
T ss_conf             --9999----99982791500316677550457864234521899999965989697999843----1999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  378 VFYF  381 (391)
Q Consensus       378 ~~~~  381 (391)
                      |+++
T Consensus       423 AL~k  426 (426)
T PRK05994        423 ALAK  426 (426)
T ss_pred             HHCC
T ss_conf             8585


No 169
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.12  E-value=1.5e-07  Score=67.42  Aligned_cols=279  Identities=18%  Similarity=0.187  Sum_probs=158.0

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEEE
Q ss_conf             8899999999999999968899857999748734899987532057897079970736888--88765323876306740
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREFT  121 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~~  121 (391)
                      .+-...++   +.|..+-+..    -.++.+||-.|+.+++++++++|+.+++....||.-  .++...+..+.++...+
T Consensus        39 nPT~~~le---~~la~LEg~~----~a~~~sSGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~~~~~~l~~~Gi~v~~~d  111 (369)
T cd00614          39 NPTVDALE---KKLAALEGGE----AALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVD  111 (369)
T ss_pred             CHHHHHHH---HHHHHHHCCC----CEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEC
T ss_conf             86799999---9999982998----0899657899999999985288999999578852399999977860892389767


Q ss_pred             CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC--CEE---EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf             57776578676785--565799742024202203--203---502568614886401--101102545568579997001
Q gi|254780153|r  122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP--DVG---FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ  192 (391)
Q Consensus       122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~--~~~---~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ  192 (391)
                      ..     +.+.++.  .+..-+++.||.+--...  ..+   .+++++++++|||-+  +-+...|++ .+.|+++-|.-
T Consensus       112 ~~-----d~~~~~~~i~~~t~li~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atp~~~~Pl~-~GaDivv~S~T  185 (369)
T cd00614         112 PD-----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPLE-LGADIVVHSAT  185 (369)
T ss_pred             CC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCEEEEEECCCCCHHCCCHHH-HCCCEEEEECC
T ss_conf             87-----8688997638785089996589997062272999999976671799747743120158577-48968999556


Q ss_pred             HCCCCCCCC--EEEEECHH-HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             200176651--54456778-887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  193 KVLGGEAGF--GIIILSPA-SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       193 K~l~~ppGl--~~v~~s~~-al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      |-++|-..+  |.|+.+.+ .+++...            +   ..     ..|.   +++-+..|.+...|      ..+
T Consensus       186 Ky~~Ghsd~l~G~v~~~~~~~~~~l~~------------~---~~-----~~G~---~~sp~~a~l~lrgl------~TL  236 (369)
T cd00614         186 KYIGGHSDVIAGVVVGSGEALIQRLRF------------L---RL-----ALGT---ILSPFDAWLLLRGL------KTL  236 (369)
T ss_pred             CCCCCCCCEEEEEEEECHHHHHHHHHH------------H---HH-----HCCC---CCCHHHHHHHHHCC------CCH
T ss_conf             312588775768998270888999999------------9---98-----6457---68978889988601------759


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676688200--------------365317898247310113734567888999998
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      .-|.+||.+++..+-+|+++++.... |..|..              -....++|.++..      .+    ..+.+...
T Consensus       237 ~lRm~~~~~nA~~lA~~L~~hp~V~~-V~yPgL~s~p~~~~~~~~~~g~ggl~sf~l~~~------~~----~~~~f~~~  305 (369)
T cd00614         237 PLRMERHSENALKVAEFLEKHPKVER-VYYPGLPSHPQHELAKKQMSGYGGVFSFELKGG------LE----AAKKFLNA  305 (369)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCE-EECCCCCCCCCHHHHHHHCCCCCEEEEEEECCC------HH----HHHHHHHH
T ss_conf             99999999999999999971999887-978789888048999976899971779997698------99----99999985


Q ss_pred             HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676----------------------75-05686158889999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      |.--.....+|+.++.                      .. -+|+++|=    ||++.|++-|+.||
T Consensus       306 l~lf~~~~S~Gg~~SLi~~p~~~~~~~~~~~~~~~~Gi~~~liRlsvGl----Ed~eDLi~DL~~AL  368 (369)
T cd00614         306 LKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL  368 (369)
T ss_pred             CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEC----CCHHHHHHHHHHHC
T ss_conf             8906331267876715677642355328999999669792969999500----99999999999853


No 170
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.12  E-value=2.4e-07  Score=66.11  Aligned_cols=306  Identities=14%  Similarity=0.073  Sum_probs=163.1

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-------CCCCC-CEE
Q ss_conf             968999986321036532898899-999999999999968899857999748734899987532-------05789-707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-------LLGYR-GVD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-------l~~~~-~~~   94 (391)
                      +|+ |.+++.+++-...|-+..|. +-..+.-+.|.+..  +-+ +|+| ..||+.++|+++.=       --+++ ..+
T Consensus        58 ~p~-I~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L~~~~--~~d-rv~f-~~SGSEAvE~AiklAr~~~~~~~~~~r~~i  132 (403)
T PRK05093         58 HPA-LVKALKEQGEKLWHISNVFTNEPALRLAKKLVDAT--FAE-RVFF-ANSGAEANEAALKLARRYACDRHGPEKTEI  132 (403)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC--CCC-EEEE-ECCHHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             799-99999999875577757414889999999986416--877-5998-386778999999999999997289987547


Q ss_pred             EEEECCHHHHHHHHHHHCCCC----------CEEEEECCCCCCCCHHHCCC--CCCEEEEEEECCCC---EEECC-----
Q ss_conf             997073688888765323876----------30674057776578676785--56579974202420---22032-----
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLSLQ----------DVREFTAPYGSLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD-----  154 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~-----  154 (391)
                      +...++|=++...... ..+.          ...+...|++   +++.++.  .+.++.+-.|...|   +..|.     
T Consensus       133 i~~~~~yHG~t~~a~s-~~g~~~~~~~~~p~~~~~~~~p~~---d~~~l~~~~~~~iaAviiEPi~g~gG~~~~~~~yl~  208 (403)
T PRK05093        133 IAFHNSFHGRTLFTVS-VGGQPKYSDGFGPKPADITHVPFN---DLAALKAVIDDKTCAVVVEPIQGEGGVIPATPEFLQ  208 (403)
T ss_pred             EEECCCCCCCCHHHHH-HCCCCHHCCCCCCCCCCCEECCCC---CHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHH
T ss_conf             7775886888368776-258801102778999775655633---688886033774479999576678997589999999


Q ss_pred             -EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             -035025686148864011011025---4--55685--799970012001766515445677888765411445778312
Q gi|254780153|r  155 -VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       155 -~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
                       ...+|+++++++|+|=|.+=.++-   +  +..++  |++  ...|+|++===++.++.+++..+...           
T Consensus       209 ~lr~lc~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PDiv--~~gKglggG~Plsav~~~~~i~~~~~-----------  275 (403)
T PRK05093        209 GLRELCDKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTAEIASHFK-----------  275 (403)
T ss_pred             HHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE--EECCCCCCCCCEEEEEECHHHHHHCC-----------
T ss_conf             99986301683798601342688777752223689899889--97300158864279987288786507-----------


Q ss_pred             HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT  306 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~  306 (391)
                                 ....++|+..-|+ ...+...+|+.+++++    ..++.+++.+.+.+.+++..--...+.  +.|...
T Consensus       276 -----------~~~~g~T~~g~pl-a~aaala~L~~i~~~~----l~~~a~~~G~~l~~~L~~l~~~~~~i~--~VRG~G  337 (403)
T PRK05093        276 -----------VGTHGSTYGGNPL-ACAVAEAVFDIINTPE----VLEGVKAREQRFVDGLQKINEKYGVFS--EIRGKG  337 (403)
T ss_pred             -----------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCEE--EEEECC
T ss_conf             -----------8772658985899-9999999999996344----999999999999999999986289826--665412


Q ss_pred             EEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             178-9824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  307 SIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       307 ~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      ... +.+.++..         ...+++...+.++|+++...|    +..+|+.--=.++.++|+.+++.||.++.+.
T Consensus       338 lm~giel~~~~~---------~~a~~i~~~~~~~Gll~~~~g----~n~irl~PPL~it~~eid~~l~~l~~al~eV  401 (403)
T PRK05093        338 LLIGAELNEQYK---------GRARDFLYAAAEEGVMVLVAG----PDVLRFAPSLVIPDADIDEGLARFEKAVAKV  401 (403)
T ss_pred             EEEEEEECCCCC---------HHHHHHHHHHHHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             699999658752---------169999999996892895279----9979997884489999999999999999998


No 171
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.12  E-value=4.5e-07  Score=64.36  Aligned_cols=307  Identities=19%  Similarity=0.145  Sum_probs=183.8

Q ss_pred             CCCCCCHHHHHHHHHHHCCCC-----CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             877689689999863210365-----328-98899999999999999968899857999748734899987532057897
Q gi|254780153|r   19 GPCAKRPGWSLGILEGALLGR-----SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG   92 (391)
Q Consensus        19 GP~~~~p~~v~~~~~~~~l~~-----sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~   92 (391)
                      |=+. +|+ +.+++.+.+-..     +-| -.=-..++.+..+.|.++++.+.   ++++ +||=.+..+++..|.++++
T Consensus        51 GLa~-~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~---al~f-~SGy~AN~~~i~~l~~~~d  124 (388)
T COG0156          51 GLAS-HPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA---ALLF-SSGFVANLGLLSALLKKGD  124 (388)
T ss_pred             CCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---EEEE-CCCCHHHHHHHHHHCCCCC
T ss_conf             5268-878-99999999998199989767044782899999999999849984---8997-1531117778888568886


Q ss_pred             EEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CC---C---CCEEEEE-EECCCCEEECCEEE--ECCCC
Q ss_conf             07997073688888765323876306740577765786767-85---5---6579974-20242022032035--02568
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DF---D---RDVVFVW-NGTTSGVCVPDVGF--IPESR  162 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~---~---~~v~~~h-~ETstGv~~~~~~~--~~~~~  162 (391)
                      .++.  .....--+.+..+.....+....-  ....+++.. ..   .   ....+|. .=+..|..-|+.++  +++.+
T Consensus       125 li~~--D~lnHASiidG~rls~a~~~~f~H--nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky  200 (388)
T COG0156         125 LIFS--DELNHASIIDGIRLSRAEVRRFKH--NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKY  200 (388)
T ss_pred             EEEE--ECHHHHHHHHHHHHCCCCEEEECC--CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf             8998--010205399889857883898268--999999999876222478754999823421899857789999999983


Q ss_pred             CCEEEEEECCHHHHCC---------C--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             6148864011011025---------4--5568579997001200176651544567788876541144577831232001
Q gi|254780153|r  163 EGLVICDATSAVFARH---------I--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       163 ~~llivD~vSs~g~~p---------~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      ++.++||=+=++|..-         +  ....+|++..+--|+||+-.|  ++..+....+-....  ..+  .+     
T Consensus       201 ~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg--~v~g~~~~~d~L~~~--ar~--~i-----  269 (388)
T COG0156         201 GALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGG--YIAGSAALIDYLRNR--ARP--FI-----  269 (388)
T ss_pred             CCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECHHHHCCCCC--EEECCHHHHHHHHHH--CCC--EE-----
T ss_conf             9589998520102437998617887388876514999875054322684--465759999999971--865--22-----


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             12321033478644666448899999999862010318999999997799999998747971676688200365317898
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK  311 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~  311 (391)
                                .+ -.-|| ....+..++++.+.+.   ..+..+.+++.+.++..+...++..     ...-| -++++.
T Consensus       270 ----------fS-talpP-~~aaa~~~al~~l~~~---~~~r~~L~~~~~~~~~~~~~~~~~~-----~~s~s-~I~pv~  328 (388)
T COG0156         270 ----------FS-TALPP-AVAAAALAALRILEEG---PERRERLQELAAFFRSLLKALGLVL-----LPSES-PIIPVI  328 (388)
T ss_pred             ----------CC-CCCCH-HHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHCCCCC-----CCCCC-CEEEEE
T ss_conf             ----------14-77897-8899999999998758---7889999999999998888529765-----78889-866169


Q ss_pred             ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             2473101137345678889999988862828726655676750---568615888999999999999999
Q gi|254780153|r  312 IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       312 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      +.|+..           ...+...|.++|+.+..-.+++++++   +||..-...+++||+.|+++|..+
T Consensus       329 ~gd~~~-----------a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         329 LGDEER-----------ALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             ECCHHH-----------HHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             688899-----------99999999977925712368998999650898716779999999999999852


No 172
>PRK12403 putative aminotransferase; Provisional
Probab=99.12  E-value=3.1e-07  Score=65.35  Aligned_cols=329  Identities=15%  Similarity=0.099  Sum_probs=161.4

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH---HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------CC-CCCE
Q ss_conf             968999986321036532898899---9999999999999688998579997487348999875320------57-8970
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK---ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------LG-YRGV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~---~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~~-~~~~   93 (391)
                      +|. |.+++.+++-...|-+.-|.   ....+.-+.|.+++  |..+.-+++..|||.+.|+++.=.      .+ ++..
T Consensus        72 ~p~-I~~Ai~~q~~~l~~~~~~~~~~~~~~~elAe~L~~~~--P~~~~~v~f~~sGSEA~E~AiklAr~y~~~~g~~~~~  148 (460)
T PRK12403         72 RKD-LAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLL--PGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKK  148 (460)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             599-9999999997558715654567889999999999757--8765869844871899999999999999860899746


Q ss_pred             E-EEEECCHHHHHHHHHHH--------CCC--CCEEEEECCCCC----CCCHH--------HC-----C-CCCCEEEEEE
Q ss_conf             7-99707368888876532--------387--630674057776----57867--------67-----8-5565799742
Q gi|254780153|r   94 D-VLAWESFGLGWMSDIRQ--------LSL--QDVREFTAPYGS----LPDFS--------KV-----D-FDRDVVFVWN  144 (391)
Q Consensus        94 ~-~~~~g~~~~r~~~~~~~--------~~~--~~~~~~~~~~g~----~~~~~--------~~-----~-~~~~v~~~h~  144 (391)
                      . +..+++|-++.......        .+.  .++.....|+-.    ....+        ++     + ....++.+-.
T Consensus       149 ~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~~p~~~~~~~P~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi~  228 (460)
T PRK12403        149 IMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVA  228 (460)
T ss_pred             EEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             99996688774079887246741244567889984114775445566778877888999999999999628986699995


Q ss_pred             ECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHH
Q ss_conf             02420---22032------035025686148864011011025---4--5568579997001200176-65154456778
Q gi|254780153|r  145 GTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPA  209 (391)
Q Consensus       145 ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~  209 (391)
                      |+..|   +..|.      ...+|+++++++|+|=|.+=.++-   +  +.+++.=.+...-|+|++= -=++.++.|++
T Consensus       229 EPi~g~gG~i~pp~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gV~PDivt~gK~l~gG~~Plsav~~~~~  308 (460)
T PRK12403        229 EPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKR  308 (460)
T ss_pred             CCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHH
T ss_conf             45225586572756776999999732596699862512776343773002179587712221244578776179973589


Q ss_pred             HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r  210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE  289 (391)
Q Consensus       210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~  289 (391)
                      ..+....   .+.   .            ...++|+.--|+ ...+..++|+.++++ ++-...++  +..+.+.+.+..
T Consensus       309 i~~~~~~---~~~---~------------~~hg~T~~Gnpl-a~Aaala~l~~i~~e-~l~~~~~~--~~g~~l~~~L~~  366 (460)
T PRK12403        309 IAEALVE---QGG---V------------FAHGLTYSGHPV-AAAVAIANLKALRDE-GVVTRVKD--DTGPYLQRCLRE  366 (460)
T ss_pred             HHHHHHC---CCC---C------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CHHHHHHH--HHHHHHHHHHHH
T ss_conf             9987503---786---5------------014778899989-999999999999866-69999999--999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf             79716766882003653178982473101137345678889999988862828726655676750568615888999999
Q gi|254780153|r  290 NDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLL  369 (391)
Q Consensus       290 ~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~  369 (391)
                      ...-.+++.+-.-+..+... .+.++................+.....++|+++..     ....+++.--=.++.++++
T Consensus       367 l~~~~p~vgdVRG~GLm~gi-elv~~~~~~~~~~~~~~~~~~~~~~~~~~Glli~~-----~~~~~~l~PPLiit~~eid  440 (460)
T PRK12403        367 VFGDHPLVGEVQGAGLVAAL-QFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRS-----TLGRMIMAPALVAGRAEID  440 (460)
T ss_pred             HHHCCCCEEEEECCCEEEEE-EECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHHHHH
T ss_conf             87259958863014549999-94257642113652578999999999979989973-----6980999899438899999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999999
Q gi|254780153|r  370 LLCDWLRWVFYFQK  383 (391)
Q Consensus       370 ~L~~aLe~~~~~~k  383 (391)
                      .+++.|+.++.+.-
T Consensus       441 ~~~~~l~~al~~~~  454 (460)
T PRK12403        441 ELVDKTRIAVDRTA  454 (460)
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             99999999999999


No 173
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.12  E-value=7.8e-08  Score=69.20  Aligned_cols=313  Identities=17%  Similarity=0.182  Sum_probs=184.5

Q ss_pred             CCHHHHHHHHHHHCCCCC------CC----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf             896899998632103653------28----98899999999999999968899857999748734899987532057897
Q gi|254780153|r   23 KRPGWSLGILEGALLGRS------HR----CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG   92 (391)
Q Consensus        23 ~~p~~v~~~~~~~~l~~s------HR----s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~   92 (391)
                      +.|. |++++...+-+++      .|    .....++-.-+.++.+++|+...   +=+-+-||+.++-++.+.|++|||
T Consensus        31 ~S~~-v~~a~gS~ltnkYaeG~pg~Ryy~G~~~iD~iE~la~~rak~LF~a~~---anVqp~SGs~AN~av~~all~pGD  106 (402)
T cd00378          31 TSPA-VMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEY---ANVQPHSGSQANLAVYFALLEPGD  106 (402)
T ss_pred             CCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             7999-999856730154768899864667662599999999999999838987---475878739999999999727999


Q ss_pred             EEEEEE---C-CHHHHHHHHHHHCCCCCEEEEECCC-----CCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEE
Q ss_conf             079970---7-3688888765323876306740577-----76578676785-----565799742024202203--203
Q gi|254780153|r   93 VDVLAW---E-SFGLGWMSDIRQLSLQDVREFTAPY-----GSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVG  156 (391)
Q Consensus        93 ~~~~~~---g-~~~~r~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~  156 (391)
                      .++...   | +.+..........+ ...  ...++     ....|.+++..     .+.+.++-. ++.--..|  ...
T Consensus       107 ~il~l~l~~GGHltHg~~~~v~~~g-~~~--~~~~Y~vd~~~~~IDyd~~~~~a~~~kPklIi~G~-S~y~r~~d~~~~r  182 (402)
T cd00378         107 TIMGLDLSHGGHLTHGSFTKVSASG-KLF--ESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA-SAYPRPIDFKRFR  182 (402)
T ss_pred             EEEEECCCCCCCCCCCCCCCCEEEE-EEE--EEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCHHHHH
T ss_conf             8998664347775667787720213-567--88963245565871899999999865996999777-1565655889999


Q ss_pred             EECCCCCCEEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECH-HHHHHHHHCCCCCCCCCHHHCC
Q ss_conf             5025686148864011011-----025455685799970012001766515445677-8887654114457783123200
Q gi|254780153|r  157 FIPESREGLVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSP-ASVERLEKYVPSWPLPKIFRMV  230 (391)
Q Consensus       157 ~~~~~~~~llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~-~al~~~~~~~~~~~~~~~~~~~  230 (391)
                      .++.+.++++++|++--.|     ..|=+....|++.++.+|-|-||-| +++..++ +..+++....    .       
T Consensus       183 eIad~vgA~l~~D~aHi~GLIA~g~~p~Pl~~ADvvt~tTHKTlrGPrG-GiIl~~~~~~~~kId~av----f-------  250 (402)
T cd00378         183 EIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAV----F-------  250 (402)
T ss_pred             HHHHHCCCEEEEEHHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCHHHHHHHHHHH----C-------
T ss_conf             9998709889855012344303565799768765774464345789984-089954278998854650----9-------


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             11232103347864466644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r  231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM  310 (391)
Q Consensus       231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~  310 (391)
                                 ..+-..|-.+.|.++..++.+..+.. .....++.-++++.+-+.+...+ +.....  ..-+..+ .+
T Consensus       251 -----------Pg~qggph~h~iAa~Aval~Ea~~~~-f~~Ya~qVv~NAkaLA~~L~~~G-~~vv~g--gTd~H~v-lv  314 (402)
T cd00378         251 -----------PGLQGGPHLHVIAAKAVALKEALEPE-FKAYAKQVVENAKALAEALKERG-FKVVSG--GTDNHLV-LV  314 (402)
T ss_pred             -----------CCCCCCHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHCC-CEEECC--CCCCCEE-EE
T ss_conf             -----------86446745667899999999986866-89999999999999999998589-479748--9988779-99


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC----CC--CCCCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Q ss_conf             8247310113734567888999998886282872665----56--767505686158----8899999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS----YR--DAPLGLRVWVGV----TVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----~r--~~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~  380 (391)
                      .+.+..+       .   -+.....|.+.|+.+.-+.    .+  ..+.|+|||+--    -..++|+..+.+.|..+..
T Consensus       315 d~~~~g~-------~---G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGT~a~T~rG~~e~em~~ia~lI~~~l~  384 (402)
T cd00378         315 DLRPKGI-------T---GKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK  384 (402)
T ss_pred             ECCCCCC-------C---HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             6664568-------9---99999999984908754748899999999976164778998589988999999999999981


Q ss_pred             H
Q ss_conf             9
Q gi|254780153|r  381 F  381 (391)
Q Consensus       381 ~  381 (391)
                      .
T Consensus       385 ~  385 (402)
T cd00378         385 D  385 (402)
T ss_pred             C
T ss_conf             7


No 174
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.12  E-value=3.2e-07  Score=65.31  Aligned_cols=277  Identities=14%  Similarity=0.109  Sum_probs=157.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCCEEE
Q ss_conf             289889999999999999996889985799974873489998753205789-7079970736888887653238763067
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGWMSDIRQLSLQDVRE  119 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~  119 (391)
                      ||=|+  .-..+.++.|.+.++++.+ .+++ ..|+...++.++..++++| +.+++..-.|+..  ..+++..+..+..
T Consensus        48 nRYPD--~~~~~L~~~lA~~~~v~~~-~Ii~-gnGSde~I~~i~~af~~pg~d~vl~~~PtF~~Y--~~~a~~~g~~~~~  121 (346)
T PRK04635         48 NRYSE--CQPKELIQAYAAYAGVKPE-QVLT-SRGADEGIELLIRAFCEPNQDAILYCPPTYGMY--AISAETIGVERKT  121 (346)
T ss_pred             CCCCC--CCHHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHCCCEEEE
T ss_conf             67999--8889999999999686966-8998-488999999999998469997699778756999--9999747967999


Q ss_pred             EECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-HHHCC--CC-CCCC-EE
Q ss_conf             40577765786767----855657997420242022032035---025-6861488640110-11025--45-5685-79
Q gi|254780153|r  120 FTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA-VFARH--ID-FNKL-DV  186 (391)
Q Consensus       120 ~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs-~g~~p--~d-~~~i-Dv  186 (391)
                      +........+++.+    +..+.+.+|.=..-||...+..++   +.. ..+.++|+|-.=. |...+  ++ ..+. .+
T Consensus       122 vpl~~d~~~dl~~l~~~~~~~kli~l~NPNNPTG~~~~~~~l~~l~~~~~~~~lvVvDEAY~ef~~~~s~~~l~~~~~Nl  201 (346)
T PRK04635        122 VPLTSDWQLDLPSIEANLDNVKLVFVCSPNNPTGNLVKRKDIISLLEMTKDRAIVVMDEAYIDFCPEASTVDLLAQYPNL  201 (346)
T ss_pred             EECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCCCCCCHHHHHHHCCCE
T ss_conf             73685657799999864348758997789998764489999999998487565599874531036564467898608816


Q ss_pred             EE-ECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99-7001200176651--54456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r  187 VT-FSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL  263 (391)
Q Consensus       187 ~~-a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i  263 (391)
                      ++ =+--|.+| -||+  |.++.+++.++...+...+                         +..+.....+...+|.. 
T Consensus       202 iVlRTfSK~~g-LaGlRlGY~ia~~~~i~~l~k~~~p-------------------------~~v~~~a~~~a~~al~~-  254 (346)
T PRK04635        202 AILRTLSKAFA-LAGLRCGFTLANEELINVLLKVIAP-------------------------YPVPVPVAEIATQALSE-  254 (346)
T ss_pred             EEEECHHHHHC-CCCCCCEEECCCHHHHHHHHHHHCC-------------------------CCCCHHHHHHHHHHHHH-
T ss_conf             87505678740-6541114100799999999984089-------------------------88889999999999730-


Q ss_pred             HCCCCHHH---HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             01031899---999999779999999874797167668820036531789-82473101137345678889999988862
Q gi|254780153|r  264 KKMGGLSA---CVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDSDIASLDINSQKSFCKSMLSFLEKE  339 (391)
Q Consensus       264 ~~~gGl~~---~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~~~~~~~~~~~~~~~~~~~~~l~~~  339 (391)
                        . ....   ......+..+.++..+...+++..+      -|.+|..+ ++++              ...+...|.++
T Consensus       255 --~-~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~------~s~aNFil~~~~~--------------~~~~~~~l~~~  311 (346)
T PRK04635        255 --A-GLARAKFQVLDLSANRAYLQAGLSMLPGVTVF------EGWGNYLLVKFPD--------------GDALFKAAWDH  311 (346)
T ss_pred             --H-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC------CCCCCEEEEECCC--------------HHHHHHHHHHC
T ss_conf             --7-89999999999999999999999867990778------9988089998899--------------99999999839


Q ss_pred             CEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             8287266556767505686158889999999999999999
Q gi|254780153|r  340 EIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       340 g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      |+++.-.   ..+..+||+.+   ++++.++|+++|..-|
T Consensus       312 GI~VR~~---~~~~~iRISvG---t~eEn~~~l~~lr~~~  345 (346)
T PRK04635        312 GIILRNS---PIENCVRISVG---NREECEKTLGFIRNYY  345 (346)
T ss_pred             CEEECCC---CCCCEEEEECC---CHHHHHHHHHHHHHHH
T ss_conf             9598569---99997999539---9999999999999985


No 175
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.12  E-value=4.1e-07  Score=64.61  Aligned_cols=288  Identities=13%  Similarity=0.067  Sum_probs=163.1

Q ss_pred             HHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH
Q ss_conf             689999863210365-3289889999999999999996889985799974873489998753205789707997073688
Q gi|254780153|r   25 PGWSLGILEGALLGR-SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL  103 (391)
Q Consensus        25 p~~v~~~~~~~~l~~-sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~  103 (391)
                      |..+++++.+.+-.. .||=|+  .-..+.++.+.+.++++.+ .|++ ..|++..+.+++.-+  +++.+++..=+|+.
T Consensus        33 p~~v~~ai~~~l~~~~~~rYPd--~~~~~Lr~~ia~~~gv~~~-~v~~-gnGs~e~i~~~~~~~--~gd~v~i~~P~f~~  106 (337)
T PRK03967         33 PEELKEEIFEELKRVPFNRYPH--ITADPLREAIAEFLGLDAE-NIIV-GNGSDELISYLVKLF--NGKYIVISPPTFGM  106 (337)
T ss_pred             CHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHHHCCCHH-EEEE-CCCHHHHHHHHHHHC--CCCEEEECCCCCHH
T ss_conf             9999999999987158776999--9879999999998683841-0998-278899999999863--99979986898308


Q ss_pred             HHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEEEC-CCCCCEEEEEECCH-HHHC
Q ss_conf             888765323876306740577765786767----85565799742024202203203502-56861488640110-1102
Q gi|254780153|r  104 GWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGFIP-ESREGLVICDATSA-VFAR  177 (391)
Q Consensus       104 r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~~~-~~~~~llivD~vSs-~g~~  177 (391)
                      .  ..+++..+..+...........+++.+    +..+.+.++.=..-||...+..++.. ...+.++|+|-.=. |...
T Consensus       107 Y--~~~~~~~g~~~~~vpl~~~f~~d~~~~~~~~~~~~~v~l~nPnNPTG~~~~~~el~~~~~~~~~vvvDEaY~ef~~~  184 (337)
T PRK03967        107 Y--SFYAKLNGIPVIDVPLKEDFTIDGDRIVEKAKDASAVFICSPNNPTGNLQPIEEILKVLDTGKPVVVDEAYVEFSGK  184 (337)
T ss_pred             H--HHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHCCC
T ss_conf             9--99999839859996153456789999985177887899938999876216789999865008878843554764575


Q ss_pred             CC-----CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCH
Q ss_conf             54-----5568579997001200176651--5445677888765411445778312320011232103347864466644
Q gi|254780153|r  178 HI-----DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSL  250 (391)
Q Consensus       178 p~-----d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v  250 (391)
                      ..     ...++ ++.-+--|.+| -||+  |.++.+++.+++..+...+                         ++-+.
T Consensus       185 s~~~l~~~~~nl-iv~rSfSK~~g-laGlRlGy~ia~~~~i~~l~k~~~p-------------------------~~vn~  237 (337)
T PRK03967        185 SYIGLLDEYDNL-ILLRTFSKAFG-LAGIRVGYAIANEEIIKALYRIKPP-------------------------FSLNI  237 (337)
T ss_pred             CHHHHHHHCCCC-EEEECCCHHHC-CCCCCCEEECCCHHHHHHHHHHCCC-------------------------CCCCH
T ss_conf             257788747762-16655665534-5620023101899999999995389-------------------------87759


Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf             88999999998620103189999999977999999987479716766882003653178982473101137345678889
Q gi|254780153|r  251 LCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCK  330 (391)
Q Consensus       251 ~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~  330 (391)
                      ....+...+|+   .++=++...+...+..+.+++.+....    +      -|.+|..+.  +               .
T Consensus       238 ~a~~aa~aal~---~~~~~~~~~~~~~~~r~~l~~~L~~~~----~------ps~aNFvl~--~---------------~  287 (337)
T PRK03967        238 LSEKIVRLMLD---HYDLIKERIDYIIKERERVYRELGDYA----Y------PSDANFLLL--K---------------L  287 (337)
T ss_pred             HHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHCCC----C------CCCCEEEEE--E---------------H
T ss_conf             99999999962---999999999999999999999812777----8------998819997--2---------------5


Q ss_pred             HHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             999988862828726655676750568615888999999999999999999
Q gi|254780153|r  331 SMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       331 ~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      ++...|.++|+++.--+. .....+||+.+   ++++.+.|+++|+...++
T Consensus       288 ~~~~~L~~~gIlVR~~~~-~~~~~iRIsvg---t~een~~ll~aLke~~e~  334 (337)
T PRK03967        288 DAYDYLLENGIVVRKLSG-RLEGHIRVTIG---KKEENDEFIKALKEFKEN  334 (337)
T ss_pred             HHHHHHHHCCEEEECCCC-CCCCEEEEECC---CHHHHHHHHHHHHHHHHH
T ss_conf             899999849909948999-99998999839---999999999999999997


No 176
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.11  E-value=8.2e-08  Score=69.06  Aligned_cols=305  Identities=14%  Similarity=0.035  Sum_probs=177.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE
Q ss_conf             88877689689999863210365328988999999999999999688998579997487348999875320578970799
Q gi|254780153|r   17 SSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL   96 (391)
Q Consensus        17 ~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~   96 (391)
                      .+||+   |+ ++++|...--+ .+.-+-..+..+.+...++++|+. .  .++|+ .|||.+...++.....++..+++
T Consensus         9 ~~g~~---~~-m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~g~-~--a~~Fv-~sGT~aN~lal~~~~~~~~~vi~   79 (342)
T COG2008           9 VAGPT---PE-MREALAAANAV-GDDVYGEDPTTNALEQRIAELFGK-E--AALFV-PSGTQANQLALAAHCQPGESVIC   79 (342)
T ss_pred             CCCCC---HH-HHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCC-C--EEEEE-CCCCHHHHHHHHHHCCCCCEEEE
T ss_conf             67879---99-99999855245-787778888999999999998577-4--49992-68438889999986489976998


Q ss_pred             EECCHHHHH-HHHHHHCCCC-CEEEEECCCCCCCCHHHCCCC---CC------EEEEEEECCC--CEEECCEEE-----E
Q ss_conf             707368888-8765323876-306740577765786767855---65------7997420242--022032035-----0
Q gi|254780153|r   97 AWESFGLGW-MSDIRQLSLQ-DVREFTAPYGSLPDFSKVDFD---RD------VVFVWNGTTS--GVCVPDVGF-----I  158 (391)
Q Consensus        97 ~~g~~~~r~-~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~---~~------v~~~h~ETst--Gv~~~~~~~-----~  158 (391)
                      .-...-..+ ..-.+..++. .......+.|.. ++++++..   .+      -.++.-.|.|  |..+|..++     +
T Consensus        80 ~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gkl-t~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~  158 (342)
T COG2008          80 HETAHIYTDECGAPEFFGGGQKLPIVPGADGKL-TPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV  158 (342)
T ss_pred             ECCCCCEECCCCCHHHHCCCCEECCCCCCCCCC-CHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEECCHHHHHHHHHH
T ss_conf             525312023567588873885430479877873-9999997636777655887507986136778666489999999999


Q ss_pred             CCCCCCEEEEEEC------CHHHHCCC-CCC-CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf             2568614886401------10110254-556-857999700120017665154456778887654114457783123200
Q gi|254780153|r  159 PESREGLVICDAT------SAVFARHI-DFN-KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV  230 (391)
Q Consensus       159 ~~~~~~llivD~v------Ss~g~~p~-d~~-~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~  230 (391)
                      |++++..+=+|+.      -+++ .+. +|. .+|+++.+.-|+++ .|+=++|+.+.+..++...+...          
T Consensus       159 ~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D~v~~~~tK~g~-~~~gAiv~gn~~~~~~a~~~rK~----------  226 (342)
T COG2008         159 CKEHGLPLHMDGARLANALVALG-VALKTIKSYVDSVSFCLTKGGG-APVGAIVFGNRDFAKRARRWRKR----------  226 (342)
T ss_pred             HHHHCCCEEECHHHHHHHHHHCC-CCHHHHHHHCCEEEEECCCCCC-CEEEEEEECCHHHHHHHHHHHHH----------
T ss_conf             99809954404088988998739-8889987428899991314775-21325897389999998999998----------


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf             112321033478644666448899999999862010318999999997-7999999987479716766882003653178
Q gi|254780153|r  231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNA-NAAVLFQFIQENDWIENLAVDETTRSNTSIC  309 (391)
Q Consensus       231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~-~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~  309 (391)
                                .|+..     .-.+-+..+.+..+++ ++-.+.++|.. +++.+-+.+.+..+.....+     +.+|..
T Consensus       227 ----------~Ggl~-----~k~r~laA~~~~~l~~-~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-----~~tN~v  285 (342)
T COG2008         227 ----------AGGLM-----RKARFLAAQGLYALED-DVWRLAADHANAMAARLAEGLEAKPGVKLAFP-----VETNMV  285 (342)
T ss_pred             ----------HCCCH-----HHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC-----CCCCEE
T ss_conf             ----------65627-----6654899999999731-58888878889999999976532689434367-----766279


Q ss_pred             EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r  310 MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       310 ~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      |..-+...      .+   .......+.+.|+..  ++|.   ...|-=+--+++.+||+.|+..+.-+
T Consensus       286 f~~l~~~~------i~---~l~~~~~~~~~~~~~--~~~~---~~vRfvts~a~~~edv~~~~~~~~~~  340 (342)
T COG2008         286 FVRLPESA------IE---ALRLAGALFYRGVLI--GAHG---EIVRFVTSWATSEEDVDELVAAIKAL  340 (342)
T ss_pred             EEECCHHH------HH---HHHHHCHHHEEEEEC--CCCC---CEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             99777678------89---997515212001221--5777---55899850249999999999999996


No 177
>PRK07324 transaminase; Validated
Probab=99.11  E-value=3e-07  Score=65.43  Aligned_cols=284  Identities=14%  Similarity=0.126  Sum_probs=152.6

Q ss_pred             HHHHHHHHHHC-C-CCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCC
Q ss_conf             99999999968-8-9985799974873489998753205789707997073688888765323876306740--577765
Q gi|254780153|r   52 KAIQLTRKVLE-V-PENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSL  127 (391)
Q Consensus        52 ~~~~~l~~l~~-~-p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~  127 (391)
                      +.++.+.+++. + |+  .| +++.|++.|+..++..++++||.+++.+=.|..- .......+ ..+..+.  ...|..
T Consensus        66 ~LR~~Ia~~y~~v~~d--~I-lvT~Ga~~Al~l~~~~l~~pGD~Viv~~P~Y~~~-~~~~~~~G-~~v~~~~l~~~~~~~  140 (373)
T PRK07324         66 EFKEAVASLYQNVKPD--NI-LQTNGATGANHLVLYALIEPGDHVISVYPTYQQL-YDIPESLG-AEVDYWKLREENGWL  140 (373)
T ss_pred             HHHHHHHHHHCCCCHH--HE-EECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHH-HHHHHHCC-CEEEECCCCCCCCCC
T ss_conf             9999999986699867--88-9868789999999999759999899889985779-99999839-876540767225988


Q ss_pred             CCHHHCC-----CCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHHHCC------CCCCCCEEEEECC
Q ss_conf             7867678-----5565799742024202203203-----5025686148864011011025------4556857999700
Q gi|254780153|r  128 PDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVFARH------IDFNKLDVVTFSA  191 (391)
Q Consensus       128 ~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g~~p------~d~~~iDv~~a~s  191 (391)
                      +++++++     ..+.+.++.--.-||...+..+     .+|..++..+|.|-+=.-...+      .+..+-.+.+.|.
T Consensus       141 ~Dl~~l~~~i~~~tkliil~nP~NPTG~v~s~e~l~~l~~la~~~~i~iisDEiY~~l~~~~~~~s~~~~~~~~I~~~S~  220 (373)
T PRK07324        141 PDLDELKRLVRPNTKLICINNANNPTGALMDRAFLEEIVEIAKSVDAYVLSDEVYRPLDEEGSFPSIADLYEKGISTNSL  220 (373)
T ss_pred             CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCEEEECCC
T ss_conf             79999996188787699979997988977889999999987541785998125542235797501056575575897154


Q ss_pred             HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      -|.++ -||+  |.++.+++.+++....+               +       ..+ .++++..-++...+++...+  =+
T Consensus       221 SK~~~-l~GlRiGwiv~~~~li~~~~~~~---------------~-------~~~-i~~~~~~~~~a~~al~~~~~--~l  274 (373)
T PRK07324        221 SKTYS-LPGIRVGWIATNEEVIDIFRKYR---------------D-------YTM-ICAGVFDDMLASLALEHRDA--IL  274 (373)
T ss_pred             CCCCC-CCCCEEEEEECCHHHHHHHHHHH---------------H-------HCC-CCHHHHHHHHHHHHHHCHHH--HH
T ss_conf             11256-77743799966999999999998---------------6-------535-56656999999999968399--99


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCC
Q ss_conf             99999999779999999874797167668820036531789824731011373456788899999-88862828726655
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSY  348 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~  348 (391)
                      +...+..+++.+.+.+++.+.+.+....++  .  -...-+.++.+.       ..    ..+.. .+.+.|+.+-.|..
T Consensus       275 ~~~~~~~~~n~~~l~~~l~~~~~~~~~~P~--g--g~~~~~~~~~~~-------~~----~~~~~~ll~~~gV~v~PG~~  339 (373)
T PRK07324        275 ERNRKIVRTNLAILDEWVAKEPRVSYVKPK--A--VSTSFIKLDVDM-------DS----EEFCEKLLKETGVLLVPGNR  339 (373)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEECCC--C--CEEEEEECCCCC-------CH----HHHHHHHHHHCCEEEECCCC
T ss_conf             999999999999999999738885376358--6--147998789998-------99----99999999968999974886


Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             67675056861588899999999999999999999
Q gi|254780153|r  349 RDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       349 r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      =..+..|||+...  +.++++.-++.|..+.++..
T Consensus       340 F~~~g~~Ri~fa~--~~~~l~egl~RL~~~l~~l~  372 (373)
T PRK07324        340 FDLEGHVRIGYCC--DTKTLKKGLKKLSEFLRKLD  372 (373)
T ss_pred             CCCCCEEEEEEEC--CHHHHHHHHHHHHHHHHHHC
T ss_conf             5899949999819--89999999999999999736


No 178
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.11  E-value=4.6e-08  Score=70.64  Aligned_cols=279  Identities=15%  Similarity=0.144  Sum_probs=157.8

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEEE
Q ss_conf             889999999999999996889985799974873489998753205789707997073688--888765323876306740
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREFT  121 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~~  121 (391)
                      .+-.+.+++.   |..+=+..   .. +..+||-+|+.+++ .++++|+.+++...-|+.  ++........+.+++.++
T Consensus        49 nPT~~~lE~~---la~LEg~~---~a-~~~sSGmaAi~a~l-~~~~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~v~fvd  120 (377)
T PRK07671         49 NPTRAALEEL---IAVLENGH---AG-FAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVD  120 (377)
T ss_pred             CHHHHHHHHH---HHHHHCCC---EE-EEECCHHHHHHHHH-HHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEC
T ss_conf             8669999999---99983986---27-75167889999999-98689998998289827789999988863697699943


Q ss_pred             CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf             57776578676785--5657997420242022032---0--3502568614886401--101102545568579997001
Q gi|254780153|r  122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ  192 (391)
Q Consensus       122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ  192 (391)
                      ..     ++++++.  ....-+++.||.+--....   .  ..+++++++++|||-+  +-+...|++. ++|+++-|.-
T Consensus       121 ~~-----d~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT~atP~~~~Pl~~-GaDivvhS~T  194 (377)
T PRK07671        121 TT-----NLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTLAKEKGLLTIVDNTFMTPYWQSPISL-GADIVLHSAT  194 (377)
T ss_pred             CC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHH-CCCEEEEECC
T ss_conf             88-----86889964788844999978999887501679999999982996985176422022787772-8878999457


Q ss_pred             HCCCCCCCC--EEEEEC-HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             200176651--544567-78887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  193 KVLGGEAGF--GIIILS-PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       193 K~l~~ppGl--~~v~~s-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      |-|+|-..+  |.|+.+ ++..++....            .        ...|.   +++-+.-|.+...|      ..+
T Consensus       195 Kyl~GHsD~~~G~vv~~~~~~~~~~~~~------------~--------~~~G~---~lsP~~a~L~lRGL------~TL  245 (377)
T PRK07671        195 KYLGGHSDVVAGLVVVNSPELAEDLHFV------------Q--------NSTGG---ILGPQDSFLLLRGL------KTL  245 (377)
T ss_pred             CEECCCCCCCCEEEEECCHHHHHHHHHH------------H--------HHHCC---CCCHHHHHHHHCCC------CCH
T ss_conf             5304787752528996778999999999------------9--------86357---78847778987068------869


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL  336 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l  336 (391)
                      .-|.+||.+++..+-+|+++++.....     ...|.+        .....++|.+.+.       +.    ...+...|
T Consensus       246 ~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~~~-------~~----a~~f~~~L  314 (377)
T PRK07671        246 GIRMEEHETNSRAIAEFLNNHPKVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSE-------ET----LNKVLERL  314 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEEEEEECCH-------HH----HHHHHHHC
T ss_conf             99999999999999999861998449967688899259999855899755999993878-------99----99999808


Q ss_pred             HHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             862828726655676----------------------75-056861588899999999999999999
Q gi|254780153|r  337 EKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       337 ~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      .--..+..+|+.++.                      .. -+|++.+    .||++.|++-|+.||+
T Consensus       315 ~l~~~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~eDLi~DL~qALa  377 (377)
T PRK07671        315 QYFTLAESLGAVESLISIPAQMTHASIPADRRKELGITDGLIRISVG----IEDGEDLIEDLAQALA  377 (377)
T ss_pred             CCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHCC
T ss_conf             82545035687760213861115555999999975979295999933----2999999999998549


No 179
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.10  E-value=2.3e-07  Score=66.21  Aligned_cols=323  Identities=13%  Similarity=0.069  Sum_probs=167.7

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHH-H-HHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHHHHHHCCC--CCCEEEEE
Q ss_conf             9689999863210365328988-9-999999999999996889985--7999748734899987532057--89707997
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVL-G-KERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEMALWSLLG--YRGVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~-f-~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea~~~nl~~--~~~~~~~~   97 (391)
                      +|+ |.+++++++=...|-+.. + .+...+.-+.|.+++  |.++  +++|. .|||.|.|+++.=.-.  .+..++..
T Consensus        60 hp~-i~~Av~~q~~~l~~~~~~~~~~~~~~~lae~l~~~~--p~~~~~~v~f~-~sGsEAve~AiklAR~~tgr~~ii~~  135 (426)
T PRK08088         60 HPK-VVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKV--PGDFAKKTLLV-TTGSEAVENAVKIARAATKRSGVIAF  135 (426)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCEEEEC-CCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             699-999999998647885677556679999999999857--75556558854-97699999999998776436663663


Q ss_pred             ECCHHHHHHHHHHHCCCC------------CEEEEECC--C-CCCCC--HHHCC-------CCCCEEEEEEECCCC---E
Q ss_conf             073688888765323876------------30674057--7-76578--67678-------556579974202420---2
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQ------------DVREFTAP--Y-GSLPD--FSKVD-------FDRDVVFVWNGTTSG---V  150 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~------------~~~~~~~~--~-g~~~~--~~~~~-------~~~~v~~~h~ETstG---v  150 (391)
                      .++|=++......--+..            .+.....|  . +...+  ...++       ...+++.+-.|...|   +
T Consensus       136 ~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~g~gG~  215 (426)
T PRK08088        136 TGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGF  215 (426)
T ss_pred             CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
T ss_conf             57748985212542488777667788999874026688623578816799999999974478776789997775677886


Q ss_pred             EECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCC
Q ss_conf             2032------0350256861488640110-110--254--5568579997001200176651544567788876541144
Q gi|254780153|r  151 CVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVP  219 (391)
Q Consensus       151 ~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~  219 (391)
                      ..+.      ...+|+.+++++|+|=|.+ ||-  .-+  +..++.-.+...-|+|++===++.++.+++..+..   .+
T Consensus       216 ~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~fa~~~~gv~PDii~~gK~l~gG~Plsav~~~~~i~~~~---~~  292 (426)
T PRK08088        216 YAASPAFMQRLRALCDQHGIMLIADEVQTGAGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAI---AP  292 (426)
T ss_pred             EECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHCCCCCCCCEEECHHHHHHC---CC
T ss_conf             638879999999999876905876330228776674135664198976201214403888750000039999533---68


Q ss_pred             CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r  220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD  299 (391)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~  299 (391)
                                         ...++|+.--|+ ...+..++|+.++++.    ..++.+++.+.+.+.+.+..--.+.+.+
T Consensus       293 -------------------~~~~~T~~gnpl-a~Aaa~a~L~~l~~e~----l~~~~~~~G~~l~~~L~~l~~~~p~i~~  348 (426)
T PRK08088        293 -------------------GGLGGTYAGNPI-ACAAALAVLEVFEEEN----LLQRANALGERLKDGLLAIAEKHPEIGD  348 (426)
T ss_pred             -------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf             -------------------887888898989-9999999999998658----9999999999999999999860998899


Q ss_pred             CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             20036531789824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       300 ~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      -.-+..+...-.+.|+....-    .......+...+.+.|.++...|  ..++.+|+.--=.++.++|+..++.||.++
T Consensus       349 VRG~GLm~gvelv~~~~~~~p----~~~~~~~i~~~~~~~Gll~~~~g--~~gnvir~~PPL~it~~eid~~~~~l~~al  422 (426)
T PRK08088        349 VRGLGAMIAIELFEDGDHSKP----AAKLTAQIVARARDKGLILLSCG--TYYNVLRILVPLTIEDAQIRQGLEIIAQCF  422 (426)
T ss_pred             EEECCEEEEEEEEECCCCCCC----CHHHHHHHHHHHHHCCCEEEECC--CCCCEEEEECCEECCHHHHHHHHHHHHHHH
T ss_conf             994455999998606876787----89999999999996899998338--999989997893478999999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  380 YFQK  383 (391)
Q Consensus       380 ~~~k  383 (391)
                      .++|
T Consensus       423 ~ea~  426 (426)
T PRK08088        423 DEAK  426 (426)
T ss_pred             HHHC
T ss_conf             9539


No 180
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.10  E-value=3.2e-07  Score=65.31  Aligned_cols=316  Identities=15%  Similarity=0.041  Sum_probs=184.8

Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHH
Q ss_conf             9999863210365328988999999999999999688998579997487348999875320-578970799707368888
Q gi|254780153|r   27 WSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGW  105 (391)
Q Consensus        27 ~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~  105 (391)
                      .|.+.+...-+..    -++   ..+-.+.+.++++.+.   ++. ..|||.+.+.++..| +++||.+++..-.|..- 
T Consensus        20 ~v~~vl~sg~i~~----G~~---v~~FE~~~ae~~G~k~---ava-~~sgT~AL~laL~al~ig~GDeVI~ps~TfvAT-   87 (374)
T COG0399          20 AVQEVLKSGWLTG----GPF---VRRFEQAFAEYLGVKY---AVA-VSSGTAALHLALLALAIGPGDEVIVPSFTFVAT-   87 (374)
T ss_pred             HHHHHHHCCCCCC----CHH---HHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHH-
T ss_conf             9999996197416----867---8999999999849973---999-668489999999964879999799368753988-


Q ss_pred             HHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECC--EEEECCCCCCEEEEEECCHHHHCC
Q ss_conf             876532387630674057776578676785-----5657997420242022032--035025686148864011011025
Q gi|254780153|r  106 MSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPD--VGFIPESREGLVICDATSAVFARH  178 (391)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~--~~~~~~~~~~llivD~vSs~g~~p  178 (391)
                      +..+...|...|-+.-.+.....+++.++.     .+.+..||.   -|...+.  ...++..++..+|-||..++|+.-
T Consensus        88 an~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y  164 (374)
T COG0399          88 ANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRHGLPVIEDAAQAHGATY  164 (374)
T ss_pred             HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEHH---CCCCCCHHHHHHHHHHCCCEEEEECCHHCCCEE
T ss_conf             99999769967999647641477999999871557749998512---168779899999998739849987603206723


Q ss_pred             CC-----CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf             45-----5685799970012001766515445677888765411445778312320011232103347864466644889
Q gi|254780153|r  179 ID-----FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCI  253 (391)
Q Consensus       179 ~d-----~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i  253 (391)
                      =.     +..+.+.-+-..|+|..--|=.++.=+++..+++...+..+...+-     ..+| .....|.-..-.     
T Consensus       165 ~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~-----~~~y-~~~~~G~N~rm~-----  233 (374)
T COG0399         165 KGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDA-----VFKY-LHEELGYNYRLT-----  233 (374)
T ss_pred             CCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCC-----CCCC-EEEECCCCCCHH-----
T ss_conf             58425566646899865877655667507983889999999999983767786-----6564-352133003877-----


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             9999999862010318999999997799999998747971676688200-365317898247310113734567888999
Q gi|254780153|r  254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT-RSNTSICMKIVDSDIASLDINSQKSFCKSM  332 (391)
Q Consensus       254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~-rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~  332 (391)
                       .++.++.+.+-+ -++.+.+|-++.++...+.+........-..++.. .+.-..++.+++. .  ..       ...+
T Consensus       234 -~iqAAigl~QL~-~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-~--~~-------R~~l  301 (374)
T COG0399         234 -EIQAAIGLAQLE-RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-G--IS-------RDAL  301 (374)
T ss_pred             -HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCC-C--CC-------HHHH
T ss_conf             -999999999998-8899999999999999998610787433578987612303668982677-7--78-------9999


Q ss_pred             HHHHHHCCEEECC--C------CCCCC---------------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             9988862828726--6------55676---------------75056861588899999999999999999
Q gi|254780153|r  333 LSFLEKEEIAYDI--G------SYRDA---------------PLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       333 ~~~l~~~g~~~~~--~------~~r~~---------------~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      ...|.++|+....  .      .||..               .+++++-++..++++|++..+++|..++.
T Consensus       302 ~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~  372 (374)
T COG0399         302 MESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG  372 (374)
T ss_pred             HHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             99998678775166313443266650445666788228899617487258999899999999999999850


No 181
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.10  E-value=1e-06  Score=62.16  Aligned_cols=328  Identities=13%  Similarity=0.090  Sum_probs=168.8

Q ss_pred             CCCCCCCCCCCCC-CCHHHHHHHHHHHCCC-CCCCC--HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHH
Q ss_conf             8998886888776-8968999986321036-53289--88999999999999999688998--57999748734899987
Q gi|254780153|r   10 KPKRPFFSSGPCA-KRPGWSLGILEGALLG-RSHRC--VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMA   83 (391)
Q Consensus        10 ~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~-~sHRs--~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~   83 (391)
                      .|.=.+|+-|=-. -.|..|++++.+.+-. .+|=+  .-..++-+.+.+.+++-++.+-+  .+|++ +.|++.++..+
T Consensus        29 ~~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~p~~~I~i-t~G~~~al~~~  107 (390)
T PRK07309         29 IPGILKLTLGEPDFTTPEHVKEAAKAAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILV-TIGATEALSAS  107 (390)
T ss_pred             CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE-CCCHHHHHHHH
T ss_conf             99908998978999988999999999984799999799774999999999999985899998887998-88989999999


Q ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC--------CCCEEEEEEECCCCEEECC
Q ss_conf             53205789707997073688888765323876306740-57776578676785--------5657997420242022032
Q gi|254780153|r   84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF--------DRDVVFVWNGTTSGVCVPD  154 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~--------~~~v~~~h~ETstGv~~~~  154 (391)
                      +..|+.+||.+++..=.|-. ....+...+. .+..+. ...+...+++.++.        .+.+.++.=..-||...+.
T Consensus       108 ~~~l~~pGD~Vli~~P~Y~~-~~~~~~~~g~-~~v~v~~~~~~~~~~~~~le~~~~~~~~k~k~lil~~P~NPtG~v~s~  185 (390)
T PRK07309        108 LTAILEPGDKVLLPAPAYPG-YEPIVNLVGA-EIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSR  185 (390)
T ss_pred             HHHHCCCCCEEEECCCCCHH-HHHHHHHCCC-EEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCH
T ss_conf             99966998989983787441-9999998498-899944620115789999999987488874999978998998887899


Q ss_pred             EE-----EECCCCCCEEEEEECCHHH---HCCC-CC----CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCC
Q ss_conf             03-----5025686148864011011---0254-55----68579997001200176651--544567788876541144
Q gi|254780153|r  155 VG-----FIPESREGLVICDATSAVF---ARHI-DF----NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVP  219 (391)
Q Consensus       155 ~~-----~~~~~~~~llivD~vSs~g---~~p~-d~----~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~  219 (391)
                      .+     .+|.+++.++|.|-+=+-.   +.+. ..    .+--+++.|.-|.++. ||+  |.++..++.+++..... 
T Consensus       186 e~l~~i~~la~~~~v~iisDEiY~~l~~~~~~~~s~~~~~~d~~i~~~s~SK~~~~-~G~RiG~i~~~~~~~~~~~~~~-  263 (390)
T PRK07309        186 EQIKALAEVLKKYDIFVISDEVYSELTYTGQSHVSIAEYLPDQTILINGLSKSHAM-TGWRIGLIFAPAELTAQLIKSH-  263 (390)
T ss_pred             HHHHHHHHHHHHCCEEEEEECCCHHCCCCCCCCCCHHHHCCCCEEEEECCCHHHHC-CCCCEEEEECCHHHHHHHHHHH-
T ss_conf             99999999997689899950551110148988644877555767999606056540-4663589974999999999998-


Q ss_pred             CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r  220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD  299 (391)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~  299 (391)
                                            ..+...+++..-++...++..-.+  -...+.+++.++.+.+++.+.+.+ +....  
T Consensus       264 ----------------------~~~~~~~~~~~q~a~~~al~~~~~--~~~~~~~~y~~rr~~l~~~l~~~~-~~~~~--  316 (390)
T PRK07309        264 ----------------------QYLVTAATTMAQFAAVEALTNGKD--DALPMKKEYIKRRDYIIEKMTALG-FKIIK--  316 (390)
T ss_pred             ----------------------HHHHCCCCHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHCC-CCCCC--
T ss_conf             ----------------------653057874999999999974827--899999999999999999998627-86338--


Q ss_pred             CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             200365317898247310113734567888999998886282872665-5676750-56861588899999999999999
Q gi|254780153|r  300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       300 ~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                      |+  +..-+-..+++.  ...+   ...+   ...++.+.|+++--|. +...+.+ +|++..  .+.+.++.-++-|+.
T Consensus       317 P~--gg~ylw~~lp~~--~~~d---~~~~---~~~l~~~~gV~v~PG~~Fg~~g~g~iRl~~a--~~~e~l~eal~Rl~~  384 (390)
T PRK07309        317 PD--GAFYIFAKIPAG--YNQD---SFKF---LQDFAKEKAVAIIPGVAFGPYGEGYVRLSYA--ASMETIKEAMKRLKE  384 (390)
T ss_pred             CC--EEEEEEEECCCC--CCCC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHH
T ss_conf             98--006980745789--9989---9999---9999996999997773228899987999982--899999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  378 VFYF  381 (391)
Q Consensus       378 ~~~~  381 (391)
                      ++++
T Consensus       385 ~l~e  388 (390)
T PRK07309        385 YMEE  388 (390)
T ss_pred             HHHH
T ss_conf             9997


No 182
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.10  E-value=8.6e-07  Score=62.58  Aligned_cols=320  Identities=16%  Similarity=0.104  Sum_probs=163.4

Q ss_pred             CHHHHHHHHHHHCCCCCCC------CHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCCHHHHHHHHHHCC--CCCCEE
Q ss_conf             9689999863210365328------9889999999999999996889985-799974873489998753205--789707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHR------CVLGKERINKAIQLTRKVLEVPENY-RIAIVPASDTGAVEMALWSLL--GYRGVD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHR------s~~f~~i~~~~~~~l~~l~~~p~~y-~v~~l~GsgT~~~ea~~~nl~--~~~~~~   94 (391)
                      +|+ |.+++.+++-...|-      +++..+    .-+.|.++.  |.++ ..+++..||+.++|+++.=..  ..+..+
T Consensus        73 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~----lae~L~~~~--p~~~~~~v~f~~SGsEAvE~AlKlAr~~t~r~~i  145 (454)
T PRK06918         73 HPK-VKEALHKQVDQYIHTGFNVMMYEPYIE----LAEKLAALA--PGSFDKQVLFLNSGAEAVENAVKIARKYTKRQGI  145 (454)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHH----HHHHHHHHC--CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCE
T ss_conf             799-999999998646676777554769999----999999847--7454746998278517999999999987288756


Q ss_pred             EEEECCHHHHHHHHHHHCCC----------CCEEEEECC--------CCCCCC------HHHCC-------CCCCEEEEE
Q ss_conf             99707368888876532387----------630674057--------776578------67678-------556579974
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLSL----------QDVREFTAP--------YGSLPD------FSKVD-------FDRDVVFVW  143 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~~----------~~~~~~~~~--------~g~~~~------~~~~~-------~~~~v~~~h  143 (391)
                      +...++|=++-..-..--+.          ....+...|        .+....      +++++       ....++.+-
T Consensus       146 i~~~~~yHG~T~~a~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi  225 (454)
T PRK06918        146 IAFSKGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFIIEEFKNFFISEVAPETIAAVV  225 (454)
T ss_pred             EEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             76338717862445653079854224678889983665786423577899766778999999999998624888668999


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEEC
Q ss_conf             202420---22032------035025686148864011011025---4--55685--79997001200176651544567
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILS  207 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s  207 (391)
                      .|...|   +..|.      ...+|+++++++|+|=|.+=.++-   +  +..++  |++  ...|+|++=-=++.++.+
T Consensus       226 ~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gK~lg~G~Plsav~~~  303 (454)
T PRK06918        226 MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFSRTGKYFAIDHYDVVPDLI--TVSKSLGAGVPISGVIGR  303 (454)
T ss_pred             EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEE--EECCHHHCCCCCCCEEEC
T ss_conf             968878889866898999999998856491687201124876135740222279898599--977265589987226521


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r  208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI  287 (391)
Q Consensus       208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i  287 (391)
                      ++..+...    +                  ...++|+.--| ....+..++|+.++++.    ..++.+++.+.+.+.+
T Consensus       304 ~~i~~~~~----~------------------~~~~~Tf~gnp-la~aaa~a~L~~i~~e~----l~~~~~~~G~~l~~~L  356 (454)
T PRK06918        304 KEIMNEAA----P------------------GELGGTYAGSP-LGCAAALAVLDIIEKEN----LNDRAIELGKVVMNRF  356 (454)
T ss_pred             HHHHHCCC----C------------------CCCCCCCCCCH-HHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf             88760468----8------------------67156179898-99999999999998668----9999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCEE-EEEE-CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCH
Q ss_conf             747971676688200365317-8982-47310113734567888999998886282872665567675056861588899
Q gi|254780153|r  288 QENDWIENLAVDETTRSNTSI-CMKI-VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEK  365 (391)
Q Consensus       288 ~~~~~~~~~~~~~~~rS~~~v-~~~~-~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~  365 (391)
                      +++.--.+.+.+  .|..... .+.+ .|+....    .+......+...+.++|+++...|.  -+..+|+.--=.++.
T Consensus       357 ~~l~~~~p~v~~--vRG~Gl~~gvelv~d~~~~~----p~~~~~~~i~~~~~~~Gll~~~~g~--~~~vlr~~PPL~it~  428 (454)
T PRK06918        357 EEMKNKYNCIGD--VRGLGAMCAFELVQDRKTKE----PDKTLTANLCAEANKRGLLLLSAGT--YGNVIRVLMPLVITD  428 (454)
T ss_pred             HHHHHCCCCEEE--EECCCEEEEEEEECCCCCCC----CCHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCH
T ss_conf             999862998688--82264799999950676689----7799999999999968959984688--999899978822899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999999877511
Q gi|254780153|r  366 EDLLLLCDWLRWVFYFQKISFLRAI  390 (391)
Q Consensus       366 ~dv~~L~~aLe~~~~~~k~~~~~~~  390 (391)
                      ++|+..++.||.+++.   .+.|+.
T Consensus       429 ~eid~~l~~l~~al~a---~~~~~~  450 (454)
T PRK06918        429 EQLEEGLTIIEESLQA---CYEKAN  450 (454)
T ss_pred             HHHHHHHHHHHHHHHH---HHHHHC
T ss_conf             9999999999999999---999854


No 183
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.09  E-value=1.9e-07  Score=66.78  Aligned_cols=319  Identities=14%  Similarity=0.054  Sum_probs=170.6

Q ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHHH
Q ss_conf             999863210365328988999999999999999688998579997487348999875320-5789707997073688888
Q gi|254780153|r   28 SLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGWM  106 (391)
Q Consensus        28 v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~~  106 (391)
                      |.+.+....+.  +     -...++-.+.+.++++.+.   ++. ..|||.|.+.++..+ +++||.+++..-.|..- +
T Consensus        16 v~~~l~s~~~~--~-----G~~v~~fE~~~~~~~g~k~---~v~-~~sgT~AL~lal~al~~~~gdeVivp~~tf~at-~   83 (380)
T TIGR03588        16 VVEVLKSDFLT--Q-----GPTVPAFEEALAEYVGAKY---AVA-FNSATSALHIACLALGVGPGDEVWTTPITFVAT-A   83 (380)
T ss_pred             HHHHHHCCCCC--C-----CHHHHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHH-H
T ss_conf             99998479866--8-----9769999999999978594---999-758899999999984999989999678530886-7


Q ss_pred             HHHHHCCCCCEEEEE-CCCCCCCCHHHCC---------CCCCEEEEEEECCCCEEECCE--EEECCCCCCEEEEEECCHH
Q ss_conf             765323876306740-5777657867678---------556579974202420220320--3502568614886401101
Q gi|254780153|r  107 SDIRQLSLQDVREFT-APYGSLPDFSKVD---------FDRDVVFVWNGTTSGVCVPDV--GFIPESREGLVICDATSAV  174 (391)
Q Consensus       107 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~---------~~~~v~~~h~ETstGv~~~~~--~~~~~~~~~llivD~vSs~  174 (391)
                      .-+...| ..+...+ .+.....+++.++         ..+++..||.   -|...+..  ..+|++++..+|-||..++
T Consensus        84 ~ai~~~G-a~pvf~Dvd~~t~~id~~~l~~~it~~~~~ktkaIi~vh~---~G~~~d~~~i~~ia~~~~i~lIEDaA~a~  159 (380)
T TIGR03588        84 NCALYCG-AKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF---AGKSVDMQAIAALAKKHGLKIIEDASHAL  159 (380)
T ss_pred             HHHHHCC-CEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECC---CCEECCHHHHHHHHHHCCCEEEEECCCHH
T ss_conf             9999879-9689984410001489888777776436777259999489---85434899999999986988999880011


Q ss_pred             HHCCCC-------CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC--HHHHHHCC-CCCCCC
Q ss_conf             102545-------56857999700120017665154456778887654114457783123200--11232103-347864
Q gi|254780153|r  175 FARHID-------FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV--KGGRVMEG-LFCGET  244 (391)
Q Consensus       175 g~~p~d-------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~  244 (391)
                      |+.-=.       +..+.+.-+.+.|.|..--|=.++.=+++..+++......+..-+.....  ....+.+. ..-|.-
T Consensus       160 Ga~~~gk~~Gs~~~gd~~~fSF~~~K~ittGeGG~i~tnd~~l~~~~r~lr~~G~~~~~~~~~~~~~~~~~y~~~~~G~N  239 (380)
T TIGR03588       160 GAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFN  239 (380)
T ss_pred             CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECCCCC
T ss_conf             57757876566443524677335555577788539996999999999999976967773100146788740366347666


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCEEEEEECCCCCCCCCHH
Q ss_conf             466644889999999986201031899999999779999999874797167668820036-5317898247310113734
Q gi|254780153|r  245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS-NTSICMKIVDSDIASLDIN  323 (391)
Q Consensus       245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS-~~~v~~~~~d~~~~~~~~~  323 (391)
                      +.-..+++. ....+|+      -++.+.++.++.++...+.+...+.+......+...+ .-..++.+......     
T Consensus       240 ~rmseiqAA-ig~~qL~------~ld~~~~~R~~ia~~Y~~~L~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~-----  307 (380)
T TIGR03588       240 YRMTDIQAA-LGLSQLK------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGC-----  307 (380)
T ss_pred             CCCCHHHHH-HHHHHHH------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC-----
T ss_conf             543124148-7688888------8999999999999999996478998356746999831568999998266731-----


Q ss_pred             HHHHHHHHHHHHHHHCCEEECCCC--------CCC-------------CCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             567888999998886282872665--------567-------------6750568615888999999999999999
Q gi|254780153|r  324 SQKSFCKSMLSFLEKEEIAYDIGS--------YRD-------------APLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       324 ~~~~~~~~~~~~l~~~g~~~~~~~--------~r~-------------~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                          ....+...|.++|+......        |+.             ..+++-+-++..++.+|++..++.|..+
T Consensus       308 ----~r~~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~p~ae~~~~~~l~LP~~~~Lt~~di~~I~~~Ik~v  379 (380)
T TIGR03588       308 ----TRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV  379 (380)
T ss_pred             ----CHHHHHHHHHHCCCCEEEECCCHHCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             ----499999999977998567230442299888278879987999998497989799998999999999999986


No 184
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.09  E-value=4.6e-07  Score=64.27  Aligned_cols=314  Identities=13%  Similarity=0.035  Sum_probs=165.5

Q ss_pred             CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---C---C-CC-CE
Q ss_conf             96899998632103653289--88999999999999999688998579997487348999875320---5---7-89-70
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---L---G-YR-GV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~---~-~~-~~   93 (391)
                      +|+ |.+++..++=..+|-+  .-..+...+.-+.|.++..-+- .+| |+..|||.|.|+++.=.   -   + ++ ..
T Consensus        60 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v-~f~~SGsEAvE~AiKlAr~~~~~~g~~~r~~  136 (423)
T PRK05630         60 HPR-LKAAAQKQIDTMSHVMFGGLTHEPAIKLTHKLLNLTGNPF-DHV-FYSDSGSVSVEVAIKMALQASKGQGHPERTK  136 (423)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CEE-EECCCHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             999-9999999986576734677576899999999987544776-889-9628728999999999999987438987634


Q ss_pred             EEEEECCHHHHHHHHHHHCCC----------CCEEEEE--CCCCCCCCH-------HHCC--CCCCEEEEEEECC----C
Q ss_conf             799707368888876532387----------6306740--577765786-------7678--5565799742024----2
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSL----------QDVREFT--APYGSLPDF-------SKVD--FDRDVVFVWNGTT----S  148 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~----------~~~~~~~--~~~g~~~~~-------~~~~--~~~~v~~~h~ETs----t  148 (391)
                      ++...++|-++...-..-.+.          .......  .+.-...+.       +.++  ....++.+-.|..    -
T Consensus       137 Ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~l~~l~~~~~~~iAAii~EPi~qg~g  216 (423)
T PRK05630        137 LLTWRSGYHGDTFTAMSVCDPENGMHSLWKGTLPEQIFAPAPPVRGSSPQAISEYLDSMELLIDETVSAIIIEPIVQGAG  216 (423)
T ss_pred             EEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
T ss_conf             76555850776664541106766655555788987645689986788878999999999874388725999974677779


Q ss_pred             CEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHH
Q ss_conf             022032------035025686148864011011025---4--5568579997001200176-651544567788876541
Q gi|254780153|r  149 GVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEK  216 (391)
Q Consensus       149 Gv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~  216 (391)
                      |+..|.      .+.+|..+++++|+|=|.+=.++-   +  +.+++-=.+...-|+|++= .-++.++++++..+....
T Consensus       217 G~~~p~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gV~PDivt~gK~l~gG~~Pl~av~~~~~i~~~~~~  296 (423)
T PRK05630        217 GMRFHDVALIEGVATLCKKHDRFLIVDEIATGFGRTGELFATLSNGVQPDIMCVGKALTGGFMSFAATLCTDKVAQLIST  296 (423)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCHHHHHCCCCCCEEEECCHHHCCCCCEEEEEECHHHHHHHCC
T ss_conf             95679879999999873306805863643205874565202765699776898762432886762799763899975427


Q ss_pred             CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r  217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL  296 (391)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~  296 (391)
                      .....                ....++|+.--|+ ...+...+|+.++++ ++.   .+.+++.+.+.+.++.+.- .+.
T Consensus       297 ~~~~~----------------~~~hg~T~~GnPl-~~Aaa~a~l~~i~~~-~l~---~~~~~~g~~l~~~L~~L~~-~p~  354 (423)
T PRK05630        297 PNGGG----------------ALMHGPTFMANPL-ACAVSHASLEIIETG-MWQ---KQVKRIEAELIAGLSPLRH-LPG  354 (423)
T ss_pred             CCCCC----------------CEEECCCCCCCHH-HHHHHHHHHHHHHHC-CHH---HHHHHHHHHHHHHHHHHCC-CCC
T ss_conf             67887----------------6505479997889-999999999999847-899---9999999999999998706-996


Q ss_pred             CCCCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             688200365317-8982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r  297 AVDETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       297 ~~~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      +.  +.|....+ .+.+.++..           .+.....+.++|+++..     .++.+|+.--=.++.++|+.+++.|
T Consensus       355 V~--dVRG~Glm~~vel~~~~~-----------~~~~~~~~~~~Gl~~~~-----~g~~l~i~PPL~it~eei~~~~~~l  416 (423)
T PRK05630        355 VA--DVRVLGAIGVIEMEQNVN-----------VEEATQAALDHGVWIRP-----FGRLLYVMPPYITTSEQCAQICTAL  416 (423)
T ss_pred             EE--EEEECCEEEEEEECCCCC-----------HHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             78--773055499999568656-----------99999999969947985-----3999999389368999999999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780153|r  376 RWVFY  380 (391)
Q Consensus       376 e~~~~  380 (391)
                      +.+.+
T Consensus       417 ~~alk  421 (423)
T PRK05630        417 HAAVK  421 (423)
T ss_pred             HHHHC
T ss_conf             99977


No 185
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.09  E-value=1.4e-07  Score=67.61  Aligned_cols=302  Identities=17%  Similarity=0.094  Sum_probs=161.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..|=+..   .. +..+||-+|+.+++++++++|+.+++...-||.-  ++.......+..++.+
T Consensus        67 gNPT~~~lE~~l---a~LEgg~---~a-~~~sSGmAAI~~~ll~ll~~Gdhiv~~~~lYggT~~l~~~~l~~~GI~~~fv  139 (437)
T PRK05613         67 TNPTVEALENRI---ASLEGGV---HA-VAFASGQAATTAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIETTFV  139 (437)
T ss_pred             CCHHHHHHHHHH---HHHHCCC---CE-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf             887899999999---9983998---58-9965899999999999728899899789876347899776775168158994


Q ss_pred             ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEE---CCEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             05777657867678--556579974202420220---3203--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCV---PDVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~---~~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +.+.    +.+.++  ......+++.||.+--..   ++..  .+++.+++++|||-+  +-+...|++. ++|+++-|.
T Consensus       140 d~~~----d~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDiVvhS~  214 (437)
T PRK05613        140 ENPD----DPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIIDNTIATAALVRPLEL-GADVVVASL  214 (437)
T ss_pred             CCCC----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHCCCHHHH-CCCEEEEEC
T ss_conf             7999----99999973787855999987999865335799999999876983995166520310685674-898899955


Q ss_pred             HHCCCCCCCC--EEEEECHH-HHHHHHHCCCCCCCCCHH---------HCCHH--------HHHHCCCCCCCCCCCCCHH
Q ss_conf             1200176651--54456778-887654114457783123---------20011--------2321033478644666448
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPA-SVERLEKYVPSWPLPKIF---------RMVKG--------GRVMEGLFCGETINTPSLL  251 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~-al~~~~~~~~~~~~~~~~---------~~~~~--------~~~~~~~~~~~~~~TP~v~  251 (391)
                      -|-|+|-.-+  |+|+-+.+ -|.....  ....+|.+.         .|...        .........|.   +++-+
T Consensus       215 TKYl~GHsDvlgG~vv~~~~~~w~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~a~~~~~r~~~~~~~G~---~lsP~  289 (437)
T PRK05613        215 TKFYTGNGSGLGGVLIDGGKFDWTVERD--GKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARVGLLRDTGA---TLSPF  289 (437)
T ss_pred             CCCCCCCCCEEEEEEEECCCCCHHHHCC--CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC---CCCHH
T ss_conf             5122688764516998468542222102--332243346873777411565411167799999999985156---78848


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC---------CCCCEEEEEECCCCC
Q ss_conf             899999999862010318999999997799999998747971676-----688200---------365317898247310
Q gi|254780153|r  252 CIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL-----AVDETT---------RSNTSICMKIVDSDI  317 (391)
Q Consensus       252 ~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~---------rS~~~v~~~~~d~~~  317 (391)
                      .-|.+.   +   .-..+.-|.+||.+++..+-+|+++++.....     ...|.+         .+-.+++|.+++.. 
T Consensus       290 ~a~L~l---r---GL~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~~~~G~~~sf~lkg~~-  362 (437)
T PRK05613        290 NAWAAV---Q---GLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLPDSPWYATKEKLGLKYTGSVLTFELKGGK-  362 (437)
T ss_pred             HHHHHH---C---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH-
T ss_conf             889987---3---675088999999999999999985099947798999999832999998589995069999967979-


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------C-CEEEEECCCCCCHHHHHHHHHH
Q ss_conf             1137345678889999988862828726655676----------------------7-5056861588899999999999
Q gi|254780153|r  318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------P-LGLRVWVGVTVEKEDLLLLCDW  374 (391)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~-~~~RIg~~g~i~~~dv~~L~~a  374 (391)
                           +.    ...+...|.-...+..+|+.++.                      . .-+|++++    .||++.|++-
T Consensus       363 -----~~----a~~f~~~L~lf~~a~SlGg~eSLi~hPa~~th~~~~~e~~~~~Gi~~~lvRlSVG----lEd~eDLiaD  429 (437)
T PRK05613        363 -----DE----AWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGVTQATVRLSVG----IETIDDIIAD  429 (437)
T ss_pred             -----HH----HHHHHHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHH
T ss_conf             -----99----9999984865412016776550547764345656899999866989494999941----1999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780153|r  375 LRWVFYF  381 (391)
Q Consensus       375 Le~~~~~  381 (391)
                      |+.||+.
T Consensus       430 L~qAL~a  436 (437)
T PRK05613        430 LEGGFAA  436 (437)
T ss_pred             HHHHHHC
T ss_conf             9999822


No 186
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.09  E-value=6.2e-07  Score=63.46  Aligned_cols=322  Identities=12%  Similarity=0.016  Sum_probs=164.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC------C-CCC-E
Q ss_conf             968999986321036532898-89-999999999999996889985799974873489998753205------7-897-0
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL------G-YRG-V   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~------~-~~~-~   93 (391)
                      +|+ |.+++.+++-...|-+. .+ .....+.-+.|.++.  |.+..-+++..||+.++|+++.=..      + ++. .
T Consensus        63 hp~-i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~~  139 (441)
T PRK13360         63 RDE-IVEAVRAQAGELDYAPTFQMGHPKAFELATRIAEIA--PGGLNHVFFTNSGSESVDTALKIALAYHRARGQGQRTR  139 (441)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             799-999999998655873467678779999999999857--88868799848789999999999999988609987228


Q ss_pred             EEEEECCHHHHHHHHHHHCC---------CCCEEEEECCCCCCC---------C------HHHCC------CCCCEEEEE
Q ss_conf             79970736888887653238---------763067405777657---------8------67678------556579974
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLS---------LQDVREFTAPYGSLP---------D------FSKVD------FDRDVVFVW  143 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~---------~~~~~~~~~~~g~~~---------~------~~~~~------~~~~v~~~h  143 (391)
                      ++...++|=++...-..--+         .........|+...+         +      .++++      ....++.+-
T Consensus       140 ii~~~~syHG~t~ga~s~sg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAAii  219 (441)
T PRK13360        140 LIGRERGYHGVGFGGISVGGIAPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVI  219 (441)
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             99327862798846553558875445677889985135887642224334575256799999999999854988579999


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHC---CC--CCCCCEEEEECCHHCCCC-CCCCEEEEECH
Q ss_conf             202420---22032------03502568614886401101102---54--556857999700120017-66515445677
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFAR---HI--DFNKLDVVTFSAQKVLGG-EAGFGIIILSP  208 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~---p~--d~~~iDv~~a~sQK~l~~-ppGl~~v~~s~  208 (391)
                      .|...|   +..+.      ...+|+++++++|+|=|.+=.++   -+  +..++.=.+...-|+|++ -.=++.++.++
T Consensus       220 ~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tG~GRTG~~fa~e~~gv~PDiv~~gKgl~gG~~Plsav~~~~  299 (441)
T PRK13360        220 VEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSS  299 (441)
T ss_pred             ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEECCCCCCCCEEEECCHHHCCCCCCCEEEECH
T ss_conf             77766778952389999999999986359557720131268623567100168987878997723217873432255249


Q ss_pred             HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r  209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ  288 (391)
Q Consensus       209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~  288 (391)
                      +..+....-....  ..             ...++|+.-=|+ ...+..++|+.+++++    ...|.+++.+.+.+.++
T Consensus       300 ~i~~~~~~~~~~~--~~-------------~~hg~T~~Gnpl-acaaa~a~L~~i~~e~----l~~~~~~~g~~l~~~L~  359 (441)
T PRK13360        300 EIHDAFMQGPEAG--IE-------------FFHGYTYSGHPL-ACAAALATLDLYEREG----LLTRAARLAPYWEDALH  359 (441)
T ss_pred             HHHHHHCCCCCCC--CC-------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHH
T ss_conf             9997433697555--42-------------113677788989-9999999999999748----89999999999999999


Q ss_pred             HCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             479716766882003653178-9824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r  289 ENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED  367 (391)
Q Consensus       289 ~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d  367 (391)
                      +.... +.+.  +.|...... +.+.....      ........+...+.++|+++...     |+.+|+.--=.++.++
T Consensus       360 ~l~~~-~~v~--~VRG~Gl~~giel~~~~~------~~~~~~~~~~~~~~~~Gll~~~~-----gn~irl~PPL~it~~e  425 (441)
T PRK13360        360 SLRDA-PHVI--DIRNLGLVGGIELAPRDG------KPGKRAYEVFLKCFEKGLMIRYT-----GDILALSPPLIIEEAQ  425 (441)
T ss_pred             HHHCC-CCEE--EECCCCEEEEEEEECCCC------CHHHHHHHHHHHHHHCCEEEECC-----CCEEEEECCEECCHHH
T ss_conf             86249-9868--851554899999978888------65489999999999699499317-----9989998992088999


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999999
Q gi|254780153|r  368 LLLLCDWLRWVFYFQ  382 (391)
Q Consensus       368 v~~L~~aLe~~~~~~  382 (391)
                      |+.+++.|+.++.+.
T Consensus       426 id~~~~~l~~aL~e~  440 (441)
T PRK13360        426 IDELFDIVAQALKET  440 (441)
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             999999999999956


No 187
>PRK07337 aminotransferase; Validated
Probab=99.09  E-value=1.3e-06  Score=61.47  Aligned_cols=316  Identities=12%  Similarity=0.055  Sum_probs=159.3

Q ss_pred             HHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf             68999986321036-532898--899999999999999968899857999748734899987532057897079970736
Q gi|254780153|r   25 PGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF  101 (391)
Q Consensus        25 p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~  101 (391)
                      |..+++++.+.+-. ..|=++  =..++-+.+.+.+++-++.+=+-+=++++.|++.++..++..|+++||.+++-.=.|
T Consensus        45 p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~i~pe~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y  124 (388)
T PRK07337         45 PEPVVEAAARALRRGVTQYTSALGLAPLREAIAAHYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSY  124 (388)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             99999999999846999889998879999999999999868999668879848759999999999669999899858873


Q ss_pred             HHHHHHHHHHCCCCCEEEEEC-CCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEE
Q ss_conf             888887653238763067405-7776578676785-----565799742024202203203-----50256861488640
Q gi|254780153|r  102 GLGWMSDIRQLSLQDVREFTA-PYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDA  170 (391)
Q Consensus       102 ~~r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~  170 (391)
                      ..- ...+...++..+.+... ..+..+++++++.     .+.+.++.=..-||...+..+     .+|..++.++|.|-
T Consensus       125 p~~-~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~tk~iil~nP~NPtG~v~s~~el~~i~~~a~~~~~~vIsDE  203 (388)
T PRK07337        125 PCN-RHFVAAAEGRPVLVPSGPAERFQLTADDVRTHWGERTRGVLLASPSNPTGTSIEPDELRRIVEAVRARGGFTIVDE  203 (388)
T ss_pred             HHH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCC
T ss_conf             659-9999973988999403710067789799998578655399978997988856267774335544314580884576


Q ss_pred             CCHHH---HCCC---CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC
Q ss_conf             11011---0254---556857999700120017665--154456778887654114457783123200112321033478
Q gi|254780153|r  171 TSAVF---ARHI---DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG  242 (391)
Q Consensus       171 vSs~g---~~p~---d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (391)
                      +=+-.   +.|.   ...+--+.+.|.-|.++ .||  +|.++..++.+++......                       
T Consensus       204 iY~~l~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~i~p~~li~~~~~~~~-----------------------  259 (388)
T PRK07337        204 IYQGLSYDAAPVSALSLGDDVITINSFSKYFN-MTGWRLGWLVVPPALVGTFEKLAQ-----------------------  259 (388)
T ss_pred             CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH-----------------------
T ss_conf             41001248998671005785799826654557-866156999988999999999998-----------------------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
Q ss_conf             64466644889999999986201031899999999779999999874797167668820036531789824731011373
Q gi|254780153|r  243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI  322 (391)
Q Consensus       243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~  322 (391)
                      ++...+++..-++...+++. ....-++.+.+.++++.+.+.+.++..++..+..++-.+    -+-..+..  ......
T Consensus       260 ~~~~~~~~~~q~aa~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~P~G~~----~~w~d~~~--~~~~~~  332 (388)
T PRK07337        260 NLFICASALAQHAALACFEP-DTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAF----YVYADCGG--VAHPAA  332 (388)
T ss_pred             HCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE----EEEEECHH--HCCCCC
T ss_conf             54588669999999998482-247999999999999999999999975996465788266----99478642--169999


Q ss_pred             HHHHHHHHHHHHH-HHHCCEEECCCC-C-CCCCCE-EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             4567888999998-886282872665-5-676750-568615888999999999999999
Q gi|254780153|r  323 NSQKSFCKSMLSF-LEKEEIAYDIGS-Y-RDAPLG-LRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       323 ~~~~~~~~~~~~~-l~~~g~~~~~~~-~-r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      ..    ..++... +.+.|+++--|. + ..-+++ +|++..  .+.+.++.-++-|+.+
T Consensus       333 ~d----~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~iRl~~a--~~~~~l~eal~RL~~~  386 (388)
T PRK07337        333 GD----SAALTFAMLHDAGVVLVPGMDFGPHAPRDYIRLSYA--TSYSRLEEAVARLGKL  386 (388)
T ss_pred             CC----HHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHH
T ss_conf             99----999999999859999977622189999997999971--9999999999999997


No 188
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase; InterPro: IPR010961   Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin .   The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA.   The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III.   Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) .   This entry represents 5-aminoaevulinic acid (ALA) synthase (2.3.1.37 from EC), which catalyses the first stage of tetrapyrrole biosynthesis by the C4 pathway, namely the condensation of succinyl CoA and glycine. ALA synthase is a pyridoxal-phosphate-dependent enzyme. During catalysis, glycine initially binds to the enzyme cofactor, and after condensation with succinyl CoA, CoA, carbon dioxide and 5-aminolevulinic acid are produced .; GO: 0003870 5-aminolevulinate synthase activity, 0030170 pyridoxal phosphate binding, 0033014 tetrapyrrole biosynthetic process.
Probab=99.09  E-value=2.4e-08  Score=72.44  Aligned_cols=307  Identities=16%  Similarity=0.101  Sum_probs=191.1

Q ss_pred             CCHHHHHHHHHHHCCC----------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC--C
Q ss_conf             8968999986321036----------532898899999999999999968899857999748734899987532057--8
Q gi|254780153|r   23 KRPGWSLGILEGALLG----------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG--Y   90 (391)
Q Consensus        23 ~~p~~v~~~~~~~~l~----------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~--~   90 (391)
                      ++|+ |++||.+++..          ||=-...-    -+..+-|.+|= -+|.  .+++ .||=-++.+++..|-+  |
T Consensus        61 qHp~-Vl~Am~~~~~~~GaGaGGTRNIsGtn~~~----v~LEaELAdLH-~KE~--ALvF-tSgyVaNda~L~tL~k~~P  131 (427)
T TIGR01821        61 QHPK-VLQAMHEALDKVGAGAGGTRNISGTNIYH----VELEAELADLH-GKES--ALVF-TSGYVANDATLATLAKIIP  131 (427)
T ss_pred             CCHH-HHHHHHHHHHHCCCCCCCCCCCCCCCHHH----HHHHHHHHHHC-CCCH--HHHH-HHHHHHHHHHHHHHHHHCC
T ss_conf             8654-79889999996388998753656677789----99999997551-7311--3567-7889999999999998708


Q ss_pred             CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC------CCCCCEEEEEEECCCCEEECCEEE--ECCCC
Q ss_conf             9707997073688888765323876306740577765786767------855657997420242022032035--02568
Q gi|254780153|r   91 RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV------DFDRDVVFVWNGTTSGVCVPDVGF--IPESR  162 (391)
Q Consensus        91 ~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~v~~~h~ETstGv~~~~~~~--~~~~~  162 (391)
                      +-+.+...+.-..    ++.-+........-+-.....+++++      ..+|-++|=..=+-.|-.-|+.++  +++++
T Consensus       132 ~~~ifSD~LNHAS----MI~GIr~S~~~k~iFrHND~~hLe~LL~~~d~~~PKiIAFESvYSMDGd~aPi~eiCDlA~kY  207 (427)
T TIGR01821       132 GCVIFSDELNHAS----MIEGIRRSGAEKFIFRHNDVAHLEKLLQSVDPNAPKIIAFESVYSMDGDIAPIKEICDLADKY  207 (427)
T ss_pred             CEEEEECCCCHHH----HHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEHCCCCCCCCCHHHHHHHHHHH
T ss_conf             8589836556356----999987478950563059978999998647799895688610001678726678896688871


Q ss_pred             CCEEEEEECCHHH---------HCCC--------C---------------CCCCEEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf             6148864011011---------0254--------5---------------568579997001200176651544567788
Q gi|254780153|r  163 EGLVICDATSAVF---------ARHI--------D---------------FNKLDVVTFSAQKVLGGEAGFGIIILSPAS  210 (391)
Q Consensus       163 ~~llivD~vSs~g---------~~p~--------d---------------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a  210 (391)
                      |+|..+|=|=++|         ++.-        +               +++||++-..--|++|+..|.  |..|.+.
T Consensus       208 GALTy~DEVHAVGlYGprGgGIaErddfeshrasGiatPktndkGGakt~mhriDii~GTLaKAFG~~GGY--Ia~~~~L  285 (427)
T TIGR01821       208 GALTYLDEVHAVGLYGPRGGGIAERDDFESHRASGIATPKTNDKGGAKTLMHRIDIIEGTLAKAFGVVGGY--IAASRKL  285 (427)
T ss_pred             CCCCEECCEEEECCCCCCCCCCCHHHHCCHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCCE--EECCCCC
T ss_conf             88630011465336588888512022110000157677765766652001110000016511223444530--2055221


Q ss_pred             HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8765411445778312320011232103347864466---6448899999999862010318999999997799999998
Q gi|254780153|r  211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINT---PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI  287 (391)
Q Consensus       211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T---P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i  287 (391)
                      .+-...            |+           ..++||   ||. ...+..++.+.+++.+|.+.| .+||++++.++..+
T Consensus       286 ~D~~RS------------~A-----------pGFIFTTsLPP~-~~aGA~asIRhLK~~eg~~lR-~~hQ~~~~~lK~~L  340 (427)
T TIGR01821       286 IDAVRS------------YA-----------PGFIFTTSLPPA-IAAGALASIRHLKESEGQDLR-RAHQERVKRLKKLL  340 (427)
T ss_pred             EEEEEE------------CC-----------CCCHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHH
T ss_conf             320000------------37-----------842124215589-999999999997513767789-99989999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCC
Q ss_conf             7479716766882003653178982473101137345678889999988862828726655676750---5686158889
Q gi|254780153|r  288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVE  364 (391)
Q Consensus       288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~  364 (391)
                      +..+.  |....|.+    +|++.+-|+..+        +.  -.--+|.+.|+.|..=-|+++++|   +||--=+..+
T Consensus       341 ~~~Gl--Pv~~~pSH----IvPv~iGdA~~~--------k~--~SD~LL~~hGIYVQpINyPTVpRG~ERLRitPtP~H~  404 (427)
T TIGR01821       341 EALGL--PVIDNPSH----IVPVIIGDAAKC--------KK--VSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPVHT  404 (427)
T ss_pred             HHCCC--CCCCCCCE----EEEEEECCHHHH--------HH--HHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             95777--75488773----887676686889--------89--9898887178157126888898875024426888988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999998
Q gi|254780153|r  365 KEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       365 ~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      +.+++.|++||+.+|.+.-..
T Consensus       405 ~~~id~Lv~AL~~~w~~l~l~  425 (427)
T TIGR01821       405 DKLIDDLVEALLLVWDRLGLP  425 (427)
T ss_pred             HHHHHHHHHHHHHHHHHHCCC
T ss_conf             778999999999998861324


No 189
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.09  E-value=9.5e-07  Score=62.31  Aligned_cols=326  Identities=13%  Similarity=0.045  Sum_probs=177.2

Q ss_pred             CCCCCC-CCCCCHHHHHHHHHHHCCCC-CCC-C-HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHC
Q ss_conf             886888-77689689999863210365-328-9-88999999999999999688998--579997487348999875320
Q gi|254780153|r   14 PFFSSG-PCAKRPGWSLGILEGALLGR-SHR-C-VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSL   87 (391)
Q Consensus        14 ~~F~pG-P~~~~p~~v~~~~~~~~l~~-sHR-s-~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl   87 (391)
                      .+|+-| |.--+|..+.+++...+-+. .|- + .-..++-+.+.+.+++.++.+-+  .+| +++.|++.++..++.-+
T Consensus        35 I~l~iG~Pd~~~p~~i~~a~~~~~~~~~~~~y~~~G~~eLReaia~~~~~~~g~~~~pd~~I-~vt~G~~~al~~~~~al  113 (399)
T PRK07681         35 IDLSIGNPDMPPADFVREEMVHTANEKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEV-LLLMGSQDGLVHLPMVY  113 (399)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHHH
T ss_conf             88989889998789999999999718776888988739999999999999868998988849-98688899999999996


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE----
Q ss_conf             578970799707368888876532387630674--057776578676785-----565799742024202203203----
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG----  156 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~----  156 (391)
                      +++||.+++-.=.|..- ...+...+ ..+..+  ..+.+..+++++++.     .+.+.++.=..-||...+...    
T Consensus       114 ~~pGD~Vli~~P~Y~~y-~~~~~~~g-~~~v~vpl~~e~~~~~d~~~l~~~i~~~tk~iil~~P~NPTG~v~s~e~l~~l  191 (399)
T PRK07681        114 ANPGDIILVPDPGYTAY-ETGIQMAG-ATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEV  191 (399)
T ss_pred             CCCCCEEEECCCCCCCH-HHHHHHCC-CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf             79999899756874427-99998769-98999505766674368999998532255599976998988877899999999


Q ss_pred             -EECCCCCCEEEEEECCHH---HH-CCCC------CCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCC
Q ss_conf             -502568614886401101---10-2545------568579997001200176651--5445677888765411445778
Q gi|254780153|r  157 -FIPESREGLVICDATSAV---FA-RHID------FNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPL  223 (391)
Q Consensus       157 -~~~~~~~~llivD~vSs~---g~-~p~d------~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~  223 (391)
                       .+|.+++.++|.|-+=+-   .+ .+..      ....-+.+.|.-|.++ .||+  |.++..++.+++....+.    
T Consensus       192 ~~la~~~~i~iIsDEiY~~l~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~-~~G~RiG~~i~~~~~i~~~~~~~~----  266 (399)
T PRK07681        192 IAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYS-LAGSRIGYMIGNEEIVRALTQFKS----  266 (399)
T ss_pred             HHHHHHCCCEEECCCCCCCEEECCCCCCCHHHCCCCCCCCCEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH----
T ss_conf             998531363343125511103179887576443354134525322134555-653216999709999999999998----


Q ss_pred             CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             31232001123210334786446664488999999998620103189999999977999999987479716766882003
Q gi|254780153|r  224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR  303 (391)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r  303 (391)
                                         .+....+...-++...+|+.-.  .=++...+.++++.+.+.+.+...+ +...  .|.  
T Consensus       267 -------------------~~~~~~~~~~q~aa~~al~~~~--~~~~~~r~~~~~rr~~l~~~L~~~g-~~~~--~P~--  320 (399)
T PRK07681        267 -------------------NTDYGVFLPIQKAACAALRNGA--AFCEKNREIYQERRDTLVDGFRTFG-WNVD--KPA--  320 (399)
T ss_pred             -------------------HCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEEC--CCC--
T ss_conf             -------------------6656745399999999996874--7899999999999999999998759-8633--788--


Q ss_pred             CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHH--
Q ss_conf             65317898247310113734567888999998-886282872665-5676750-568615888999999999999999--
Q gi|254780153|r  304 SNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWV--  378 (391)
Q Consensus       304 S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~--  378 (391)
                      +..-+-..+++.    .+   .    .++... +.+.|+++-.|. +...+.+ +|++..  .+.+.++.-++-|+.+  
T Consensus       321 Gg~y~w~~l~~~----~d---~----~~f~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~f~--~~~e~l~eal~RLk~a~~  387 (399)
T PRK07681        321 GSMFVWAEIPDG----WT---S----LDFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QDKEVLQQVVENIRNSGI  387 (399)
T ss_pred             CEEEEEEECCCC----CC---H----HHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHCCC
T ss_conf             002896889999----99---7----9999999982999998864658999886999971--889999999999988886


Q ss_pred             HHHHHHHH
Q ss_conf             99999987
Q gi|254780153|r  379 FYFQKISF  386 (391)
Q Consensus       379 ~~~~k~~~  386 (391)
                      |..+|+.-
T Consensus       388 ~~~~~~~~  395 (399)
T PRK07681        388 FALEKVDE  395 (399)
T ss_pred             CHHHHHHH
T ss_conf             56888887


No 190
>PRK07894 consensus
Probab=99.09  E-value=2.1e-07  Score=66.47  Aligned_cols=315  Identities=13%  Similarity=0.028  Sum_probs=163.2

Q ss_pred             CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCCC-E
Q ss_conf             96899998632103653289--88999999999999999688998579997487348999875320------5-7897-0
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYRG-V   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~~-~   93 (391)
                      +|+ +.+++.+++-...|-+  .-..+-..+.-+.|.++.  |.+..-+|+..||+.++|+++.=.      . .++. .
T Consensus        69 hp~-i~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~vff~~sGSeAvE~AiKlAr~y~~~~g~~~r~~  145 (430)
T PRK07894         69 HPV-LDAALTRQLATMNHVMFGGLTHEPAARLAQLLVDIT--PAGLDTVFFSDSGSVSVEVAVKMALQYWRSRGRPGKHR  145 (430)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             899-999999999757784568757689999999999848--88879799727818899999999999999718877507


Q ss_pred             EEEEECCHHHHHHHHHHHC---CCC-----CE--EEEE---CCCCCCC-CHHHC-----CCCCCEEEEEEEC-C---CCE
Q ss_conf             7997073688888765323---876-----30--6740---5777657-86767-----8556579974202-4---202
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQL---SLQ-----DV--REFT---APYGSLP-DFSKV-----DFDRDVVFVWNGT-T---SGV  150 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~---~~~-----~~--~~~~---~~~g~~~-~~~~~-----~~~~~v~~~h~ET-s---tGv  150 (391)
                      .+...++|-++-..-..-.   ++.     +.  ....   .|....+ ..+.+     +....++.+-.|. .   -|+
T Consensus       146 ii~~~~sYHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~~~~iAaii~EP~iqg~GG~  225 (430)
T PRK07894        146 LMTWRGGYHGDTFTPMSVCDPDGGMHSLWTDVLARQVFAPQVPRDYDPAYSAAFEAQLAQHADELAAVIVEPVVQGAGGM  225 (430)
T ss_pred             EEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
T ss_conf             99971740477711477533877766666788877666899974326788999999998469986699997874388981


Q ss_pred             EECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCC
Q ss_conf             2032------035025686148864011011025---4--5568579997001200176-65154456778887654114
Q gi|254780153|r  151 CVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYV  218 (391)
Q Consensus       151 ~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~  218 (391)
                      ..|.      ...+|+++++++|+|=|.+=.++-   +  +..++-=.+...-|+|++= .-++.++++++..+......
T Consensus       226 ~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRTG~~fa~e~~gv~PDii~~aKgl~gGy~Pl~avl~~~~i~~~~~~~~  305 (430)
T PRK07894        226 RFHDPRYLRDLRDICDRHDVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLTLAATLCTADVAHTISAGE  305 (430)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHCCCCCCEEEEECCHHHCCCCCCEEEEEHHHHHHHCCCCC
T ss_conf             02899999999998751276265021311787356763543189886399977354489976201224298997456788


Q ss_pred             CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             45778312320011232103347864466644889999999986201031899999999779999999874797167668
Q gi|254780153|r  219 PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAV  298 (391)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~  298 (391)
                      .    ..             ...++|+.- +-....+...+|+.+++++ +   .++.+++.+.+.+.++.... .+.+.
T Consensus       306 ~----~~-------------~~Hg~Ty~G-nplacAaala~L~~i~~e~-l---~~~~~~~g~~l~~~L~~l~~-~p~V~  362 (430)
T PRK07894        306 A----GA-------------LMHGPTFMA-NPLACAVSVASVELLLGQD-W---RTRVAEIEAGLTAGLAPARA-LPGVT  362 (430)
T ss_pred             C----CC-------------EEECCCCCC-CHHHHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHCC-CCCEE
T ss_conf             8----86-------------123789888-9899999999999998567-9---99999999999999997457-99769


Q ss_pred             CCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             8200365317-898247310113734567888999998886282872665567675056861588899999999999999
Q gi|254780153|r  299 DETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       299 ~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                        +.|....+ .+.+.++..           .+.......++|+++.     ..++.+|+.--=.++.+||+.++++|+.
T Consensus       363 --dVRg~Gl~~~vel~~~~~-----------~~~~~~~a~~~Gvl~r-----~~~n~i~l~PPL~it~~eid~~~~~l~e  424 (430)
T PRK07894        363 --DVRVLGAIGVIELDRPVD-----------LAVATPAALDHGVWLR-----PFRNLVYAMPPYICTPAEIAQITSAMVE  424 (430)
T ss_pred             --EECCCCEEEEEEECCCCC-----------HHHHHHHHHHCCCEEE-----ECCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             --894668099999678456-----------8999999997993898-----5499999979946899999999999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780153|r  378 VFYFQ  382 (391)
Q Consensus       378 ~~~~~  382 (391)
                      +.+++
T Consensus       425 al~~l  429 (430)
T PRK07894        425 VARAL  429 (430)
T ss_pred             HHHHH
T ss_conf             99960


No 191
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.09  E-value=2.5e-07  Score=66.03  Aligned_cols=303  Identities=15%  Similarity=0.078  Sum_probs=159.6

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEECCH
Q ss_conf             968999986321036532898899999999999999968899857999748734899987532057-89-7079970736
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAWESF  101 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~g~~  101 (391)
                      +|+ |.+++.+++-...|.+..+..   +..+.+.+.+--..++.+ ++..|||.++|+++.=.-. .+ ..++...++|
T Consensus        46 ~p~-i~~ai~~q~~~~~~~~~~~~~---~~~~~la~~l~~~~~~~~-~f~~SGSEAve~AlklAr~~tgr~~ii~~~~~y  120 (375)
T PRK04260         46 HPQ-VQQALTDQAGLIWHSPNLYLS---SLQEEVAQKLTGDKDYLA-FFCNSGAEANEAAIKLARKATGKQEIITFQNSF  120 (375)
T ss_pred             CHH-HHHHHHHHHHHCCCCCHHHHH---HHHHHHHHHCCCCCCCEE-EECCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             999-999999998565698747788---999999985236667479-970867899999999876547998699977889


Q ss_pred             HHHHHHHHHHCCCCCEEEEECC------CCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC------EEEECCCCCC
Q ss_conf             8888876532387630674057------77657867678--556579974202420---22032------0350256861
Q gi|254780153|r  102 GLGWMSDIRQLSLQDVREFTAP------YGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD------VGFIPESREG  164 (391)
Q Consensus       102 ~~r~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~------~~~~~~~~~~  164 (391)
                      =++.......-+......-..+      +....+++.++  ..++++.+-.|...|   +..+.      ...+|+++++
T Consensus       121 HG~t~ga~s~tg~~~~~~~~~~~~p~~~~~~~~d~~~~~~~~~~~iAAiiiEpiqg~~G~~~~~~~yl~~lr~lc~~~gi  200 (375)
T PRK04260        121 HGRTFGAMSATGQDKIKQGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKAFVKALADYCQETGI  200 (375)
T ss_pred             CCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             96744012204874334577889987345210458899986377835999981058898757898999999999998476


Q ss_pred             EEEEEECCH-HHH--CCC--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf             488640110-110--254--55685--79997001200176651544567788876541144577831232001123210
Q gi|254780153|r  165 LVICDATSA-VFA--RHI--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME  237 (391)
Q Consensus       165 llivD~vSs-~g~--~p~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (391)
                      ++|+|=|.+ ||-  ..+  +.+++  |++..  .|+|++=-=++.++.+++..+.             +..        
T Consensus       201 llI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~--gKglg~G~P~sav~~~~~i~~~-------------~~~--------  257 (375)
T PRK04260        201 LLIVDEVQTGIGRTGKLYAFEHYGIEPDIFTL--AKGLANGLPVGAMLGKSSLGGA-------------FGY--------  257 (375)
T ss_pred             CEEEECCCCCCCCCCCCCHHHCCCCCCCEEEE--CHHCCCCCCEEEEEECHHHHCC-------------CCC--------
T ss_conf             25730121178765686554316988878987--1010488643999986787446-------------678--------


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCC
Q ss_conf             334786446664488999999998620103189999999977999999987479716766882003653178-9824731
Q gi|254780153|r  238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSD  316 (391)
Q Consensus       238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~  316 (391)
                       ...++|+.--|+ ...+..++|+.+++++    ..++.+++.+.+.+.+....--.+.+.  +.|...... +.+..+ 
T Consensus       258 -~~h~~T~~gnpl-a~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~~~~~~~~i~--~vRG~Gl~~gie~~~~-  328 (375)
T PRK04260        258 -GSHGSTFGGNKL-SMAAAKATLEIMLTAG----FLETVLSKGNKLQEQLQEALQDKETVT--TVRGLGYMIGIETTAD-  328 (375)
T ss_pred             -CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHCCCCEE--EEEEEEEEEEEEECCC-
T ss_conf             -785777998989-9999999999998646----999999999999999999985399737--6305579999995789-


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                                  ...+...+.++|.++...+    +..+|+.--=.++.++++.+++.||.+|
T Consensus       329 ------------~~~~~~~~~~~Gll~~~~g----~nvi~~~Ppl~it~~eid~~~~~l~~vF  375 (375)
T PRK04260        329 ------------LSQLVQAARDKGLIILTAG----TNVIRLLPPLTISKAEIEKGIAILSEIF  375 (375)
T ss_pred             ------------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             ------------9999999996896994079----9989998993488999999999999869


No 192
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.08  E-value=7.4e-07  Score=62.98  Aligned_cols=307  Identities=15%  Similarity=0.087  Sum_probs=166.7

Q ss_pred             CCCCCC--CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf             886888--776896899998632103653289889999999999999996889985799974873489998753205789
Q gi|254780153|r   14 PFFSSG--PCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR   91 (391)
Q Consensus        14 ~~F~pG--P~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~   91 (391)
                      .-||.+  |-. +|..+++++...+-. .+|=|+-  -..+.++.+.+.++++.+ .|++ ..|++..+..+...+. ++
T Consensus        25 idlSsN~NP~g-ppp~v~~ai~~~~~~-~~~YPd~--~~~~Lr~aiA~~~gv~~e-~I~~-gnGs~Eli~~~~~~~~-~~   97 (358)
T PRK07392         25 LDFSASINPLG-PPESVIAAIQSALSA-LRHYPDP--DYRELREALAQHHQLPPE-WILP-GNGAAELLTWAGRELA-QL   97 (358)
T ss_pred             EECCCCCCCCC-CCHHHHHHHHHHHHH-HHHCCCC--CHHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHC-CC
T ss_conf             66089999989-898999999998888-8648995--689999999998595888-8987-7579999999999975-89


Q ss_pred             CEEEEEECCHHHHHHHHHHHCCCCCEEEEECC--CCCCC-CHH---HC-CCCCCEEEEEEECCCCEEECCEEE--ECCCC
Q ss_conf             70799707368888876532387630674057--77657-867---67-855657997420242022032035--02568
Q gi|254780153|r   92 GVDVLAWESFGLGWMSDIRQLSLQDVREFTAP--YGSLP-DFS---KV-DFDRDVVFVWNGTTSGVCVPDVGF--IPESR  162 (391)
Q Consensus        92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~--~g~~~-~~~---~~-~~~~~v~~~h~ETstGv~~~~~~~--~~~~~  162 (391)
                      +.+++..=.|+..  ..+.+..+..+..+...  .+... ...   .. +..+.+.++.=..-||...+..+.  +.. +
T Consensus        98 ~~v~i~~Ptf~~Y--~~~~~~~g~~v~~vpl~~~~~~~~~~~~~~~~~~~~~~~i~l~nPNNPTG~~~~~~~l~~l~~-~  174 (358)
T PRK07392         98 REVYLLTPAFGDY--RRALRAFGATVKELPLPLSGEASLTELQLLPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLE-Q  174 (358)
T ss_pred             CEEEEECCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH-C
T ss_conf             8699957851899--999998398899985775556782056788755899878997689999776568799998863-2


Q ss_pred             CCEEEEEECCH-HHHCCC-----C-CCCC-E-EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             61488640110-110254-----5-5685-7-999700120017665--1544567788876541144577831232001
Q gi|254780153|r  163 EGLVICDATSA-VFARHI-----D-FNKL-D-VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       163 ~~llivD~vSs-~g~~p~-----d-~~~i-D-v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      ..++|+|-.=. |...+-     + ..+. . +++-+.-|.++ -||  +|.++.+++.+++..+...+           
T Consensus       175 ~~~vvvDEaY~ef~~~~~~~s~~~~~~~~~n~iv~rSfSK~~g-laGlRlGy~ia~~~~i~~l~~~~~p-----------  242 (358)
T PRK07392        175 FALVVVDEAFMDFLPPAAEQSLIPCLAEYPNLIILRSLTKFYS-LPGLRLGYAIAHPDRLQRWQQWRDP-----------  242 (358)
T ss_pred             CCEEEEECHHHHHCCCCCCCCHHHHHHCCCCEEEEEECHHHHH-CCCCCCEEEECCHHHHHHHHHHCCC-----------
T ss_conf             8999995715541688655678999753586799961628765-7441000002399999999985388-----------


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-
Q ss_conf             1232103347864466644889999999986201031899999999779999999874797167668820036531789-
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-  310 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-  310 (391)
                                    +.-+.....+...+|+   .+.-++...+...+..+.+++.+.+.+++..+.      |.++..+ 
T Consensus       243 --------------~~vn~~a~~aa~aal~---~~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p------s~anF~l~  299 (358)
T PRK07392        243 --------------WPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLP------SAANFLLV  299 (358)
T ss_pred             --------------CCCCHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC------CCCEEEEE
T ss_conf             --------------7778999999999825---999999999999999999999997189977888------85049999


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECC-CCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             824731011373456788899999-88862828726-65567675-0568615888999999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDI-GSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~-~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      +.+++             ...+.. .|.+.|+++.- ..++..+. -+||+.+   ++++.++|+++|+.++++
T Consensus       300 ~~~~~-------------~~~~~~~ll~~~gI~Vr~~~~f~~~g~~~iRisvg---t~een~~li~al~~iLa~  357 (358)
T PRK07392        300 QSQGS-------------ALQLQEELLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLLSALAAILAN  357 (358)
T ss_pred             ECCCC-------------HHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
T ss_conf             76999-------------99999999971988998688888889998999839---999999999999999706


No 193
>PRK09792 PLP-dependent GABA aminotransferase; Provisional
Probab=99.08  E-value=7.3e-07  Score=63.02  Aligned_cols=319  Identities=14%  Similarity=0.060  Sum_probs=167.4

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEEC
Q ss_conf             96899998632103653289889--9999999999999968899857999748734899987532057-89-70799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~g   99 (391)
                      +|+ |.+++.+++-...|-+..+  .+-..+.-+.|..+........++|. .|||.++|+++.=.-. .| ..++...+
T Consensus        58 ~p~-v~~Ai~~Q~~~~~~~~~~~~~~~~~~~Lae~l~~~~p~~~~~~v~f~-~SGsEAvE~AiKlAr~~tgr~~ii~~~~  135 (421)
T PRK09792         58 HPD-LVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFF-TTGAEAVENAVKIARAHTGRPGVIAFSG  135 (421)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE-CCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             899-99999999974467555544656999999999984776787559985-7835799999999887529985999817


Q ss_pred             CHHHHHHHHHHHCCCC----------CEEEEECCCCCC-------CCHHHCC-------CCCCEEEEEEECCCC---EEE
Q ss_conf             3688888765323876----------306740577765-------7867678-------556579974202420---220
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQ----------DVREFTAPYGSL-------PDFSKVD-------FDRDVVFVWNGTTSG---VCV  152 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~----------~~~~~~~~~g~~-------~~~~~~~-------~~~~v~~~h~ETstG---v~~  152 (391)
                      +|=++......--+..          ...+...|+...       ..++.++       ....++.+-.|...|   +..
T Consensus       136 sYHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~d~~~~~~~~~~~~~~iAAvi~EPiqg~gG~~~  215 (421)
T PRK09792        136 GFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNV  215 (421)
T ss_pred             CCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
T ss_conf             85885230354328976433567889997378078842246662336999999976445667458999656457788230


Q ss_pred             CC------EEEECCCCCCEEEEEECCHHHHCC-----CCCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCC
Q ss_conf             32------035025686148864011011025-----455685--79997001200176651544567788876541144
Q gi|254780153|r  153 PD------VGFIPESREGLVICDATSAVFARH-----IDFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVP  219 (391)
Q Consensus       153 ~~------~~~~~~~~~~llivD~vSs~g~~p-----~d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~  219 (391)
                      +.      ...+|+++++++|+|=|.+=.++-     ++..++  |++  ...|+|++=--++.++.+++..+.      
T Consensus       216 ~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDii--~~gK~l~gG~P~~av~~~~~v~~~------  287 (421)
T PRK09792        216 APKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLM--TMAKSLAGGMPLSGVVGNANIMDA------  287 (421)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCHHHHHHCCCCCEE--EECCCCCCCCCEEEEEECHHHHCC------
T ss_conf             898999999999987396797202210686366522657509998687--643223488771899972888646------


Q ss_pred             CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r  220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD  299 (391)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~  299 (391)
                      ..                ....++|+. -+-....+...+|+.++++ ++   .+|.+++.+.+...+.....-.+.+. 
T Consensus       288 ~~----------------~~~~~~Tf~-Gnpl~~aaa~a~L~ii~~e-~l---~~~v~~~g~~l~~~L~~~~~~~p~v~-  345 (421)
T PRK09792        288 PA----------------PGGLGGTYA-GNPLAVAAAHAVLNIIDKE-SL---CERANQLGQRLKNTLIDAKESVPAIA-  345 (421)
T ss_pred             CC----------------CCCCCCCCC-CCHHHHHHHHHHHHHHHHC-CH---HHHHHHHHHHHHHHHHHHHHCCCCEE-
T ss_conf             78----------------776478799-8989999999999999865-89---99999999999999999975699889-


Q ss_pred             CCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             200365317-8982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r  300 ETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       300 ~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                       +.|..... .+.+.|+.....    .....+.+.....++|+++...|.  .++.+|+.--=.++.++++..++.|+.+
T Consensus       346 -~VRG~Glm~gvel~d~~~~~p----~~~~~~~i~~~~~~~Gll~~~~g~--~g~~i~~~PPL~it~~eid~~~~il~~a  418 (421)
T PRK09792        346 -AVRGLGSMIAAEFNDPQTGEP----SAAIAQKIQQRALAQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKILQDA  418 (421)
T ss_pred             -EEEECEEEEEEEECCCCCCCC----CHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCEECCHHHHHHHHHHHHHH
T ss_conf             -854141899999757877883----299999999999977978994489--9898999799238899999999999999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780153|r  379 FYF  381 (391)
Q Consensus       379 ~~~  381 (391)
                      +++
T Consensus       419 L~e  421 (421)
T PRK09792        419 LSD  421 (421)
T ss_pred             HCC
T ss_conf             639


No 194
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.08  E-value=6.3e-07  Score=63.41  Aligned_cols=323  Identities=13%  Similarity=0.035  Sum_probs=171.1

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCC-CEEEEEE
Q ss_conf             968999986321036532898---89999999999999996889985799974873489998753205-789-7079970
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV---LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYR-GVDVLAW   98 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~---~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~-~~~~~~~   98 (391)
                      +|+ |.+++.+++=...|-+.   .... ..+.-+.|.+++-..-+..++|. .|||.|+|+++.=-- ..+ ..++...
T Consensus        56 ~p~-i~~Ai~~ql~~l~~~~~~~~~~~~-~~~lae~L~~~~p~~~~~~~~F~-~SGsEAvE~AiKlAr~~tgr~~iis~~  132 (422)
T PRK07495         56 HPK-VIAAVKAQLDRFTHTCHQVVPYEN-YVRLAERLNALVPGDFEKKTIFV-TTGAEAVENAVKIARAATGRSAVIAFG  132 (422)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHH-HHHHHHHHHHHCCCCCCCEEEEE-CCCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             799-999999998546675566546579-99999999975687745479972-786259999999756527998799987


Q ss_pred             CCHHHHHHHHHHHCCCC----------CEEEEECCCC-----CCCC--HHHCC-------CCCCEEEEEEECCCC---EE
Q ss_conf             73688888765323876----------3067405777-----6578--67678-------556579974202420---22
Q gi|254780153|r   99 ESFGLGWMSDIRQLSLQ----------DVREFTAPYG-----SLPD--FSKVD-------FDRDVVFVWNGTTSG---VC  151 (391)
Q Consensus        99 g~~~~r~~~~~~~~~~~----------~~~~~~~~~g-----~~~~--~~~~~-------~~~~v~~~h~ETstG---v~  151 (391)
                      ++|=++.......-+..          .......|+.     ...+  ++.++       ....++.+-.|...|   +.
T Consensus       133 ~~yHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAvIvEPiqg~gG~~  212 (422)
T PRK07495        133 GGFHGRTFMGMALTGKVVPYKVGFGAMPPDVFHVPFPVELHGVSVDQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFY  212 (422)
T ss_pred             CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCE
T ss_conf             88778642124313887654356788999936707883235776677999999998751687757899966764788866


Q ss_pred             ECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC
Q ss_conf             032------0350256861488640110-110--254--55685799970012001766515445677888765411445
Q gi|254780153|r  152 VPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS  220 (391)
Q Consensus       152 ~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~  220 (391)
                      .|.      .+.+|+++++++|+|=|.+ ||-  .-+  +.+++.=.+....|+|++==-++.++.+++..+.   ..  
T Consensus       213 ~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~Pl~av~~~~~i~~~---~~--  287 (422)
T PRK07495        213 PAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKSLAGGFPLAAVTGRAEIMDA---PG--  287 (422)
T ss_pred             ECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEECHHHHCCCCCEEEEECHHHHHC---CC--
T ss_conf             3888999999999987396687763010887665502654489998099964154288751688873998835---58--


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE  300 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~  300 (391)
                                       ....++|+.--|+. ..+..++|+.++++.    ..++.+++.+.+.+.+++...-.+.+.  
T Consensus       288 -----------------~~~~~~Tf~Gnpla-~aaa~a~L~i~~~~~----l~~~~~~~g~~l~~~L~~l~~~~p~v~--  343 (422)
T PRK07495        288 -----------------PGGLGGTYGGNPLG-IAAAHAVLDVIEEED----LCERANQLGNRLKQRLASIRETVPEIA--  343 (422)
T ss_pred             -----------------CCCCCCCCCCCHHH-HHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHCCCCEE--
T ss_conf             -----------------88866679989899-999999999998648----999999999999999999985499889--


Q ss_pred             CCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             003653178-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  301 TTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       301 ~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      +.|...... +.+.++....-    ...+...+...+.++|.++...|.  .++.+|+.--=.++.++|+.+++.||.++
T Consensus       344 dvRG~GLm~giel~~~~~~~p----~~~~~~~v~~~~~~~Gll~~~~g~--~~nvi~~~PPL~it~~eid~~~~~l~~aL  417 (422)
T PRK07495        344 DIRGPGFMNAVEFNDADTGLP----SAEFANRVRLEALEKGLILLTCGV--HGNVIRFLAPITIQDEVFGEALDILEASI  417 (422)
T ss_pred             EEEECCEEEEEEEECCCCCCC----CHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             886245699999833888897----889999999999977988983488--99989997990257999999999999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780153|r  380 YFQKI  384 (391)
Q Consensus       380 ~~~k~  384 (391)
                      .++++
T Consensus       418 ~E~~a  422 (422)
T PRK07495        418 LEARA  422 (422)
T ss_pred             HHHCC
T ss_conf             99609


No 195
>PRK06220 consensus
Probab=99.08  E-value=1.2e-06  Score=61.66  Aligned_cols=326  Identities=16%  Similarity=0.114  Sum_probs=171.1

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf             8868887768-9689999863210----3653289889999999999999996889985799974873489998753205
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL   88 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~   88 (391)
                      .+|+-|=-.. .|..+++++.+.+    .++++- .-..++-+.+.+.+++-++.+=+-+=++++.|++.++..++.-|+
T Consensus        34 i~l~iG~pdf~~p~~i~~a~~~~~~~~~~~Y~~~-~G~~~lreaia~~~~~~~g~~~~pd~I~vt~G~~~al~~~~~~l~  112 (384)
T PRK06220         34 IHLEVGEPDFPTPECVCEAACAAIERGLTHYTHS-LGLPELREAIAEHYRRRYGVDVDPDQVIVTSGTSPAMLMVFMALL  112 (384)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHC
T ss_conf             7999988999978999999999985499998999-786999999999999986899880128986888999999999981


Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE--ECC
Q ss_conf             78970799707368888876532387630674-057776578676785-----5657997420242022032035--025
Q gi|254780153|r   89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF--IPE  160 (391)
Q Consensus        89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~--~~~  160 (391)
                      ++||.+++-+=.|..- ...+...+...+.+. ....|..+++++++.     .+.+.++.-..-||...+..+.  +. 
T Consensus       113 ~pGD~Vlv~~P~Y~~~-~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~v~s~e~l~~l~-  190 (384)
T PRK06220        113 NKGDEVILSDPHYACY-PNFVKFLGGTPVFVPVYEEDGFQYRPEAIRACLTPRTKAILINSPSNPTGHVLSPERLAGIA-  190 (384)
T ss_pred             CCCCEEEECCCCCCCC-HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHH-
T ss_conf             8999899778988763-99999849839992246323767799999974788873999728999878677199999987-


Q ss_pred             CCCCEEEEEECCH-H--HHCC---CCCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHH
Q ss_conf             6861488640110-1--1025---45568579997001200176651--5445677888765411445778312320011
Q gi|254780153|r  161 SREGLVICDATSA-V--FARH---IDFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKG  232 (391)
Q Consensus       161 ~~~~llivD~vSs-~--g~~p---~d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~  232 (391)
                      +.+.++|.|-+=+ +  .+.+   ++...-.+++.|.-|.++ -||+  |.++..++.+++.....              
T Consensus       191 ~~~~~vIsDEiY~~l~~~~~~~s~~~~~~~~i~~~S~SK~~~-~~G~RiG~~i~~~~~i~~l~~~~--------------  255 (384)
T PRK06220        191 SLGIPIISDEIYHGLVYEGREHSILEFTDNAFVLNGFSKLYA-MTGWRLGYLIVPPSCVRALQKLH--------------  255 (384)
T ss_pred             HHCCEEEECCCHHHHCCCCCCCCHHHCCCCEEEEEECHHHCC-CCCCCEEEEEECHHHHHHHHHHH--------------
T ss_conf             309889724626864158998882114787899974235307-86535699998899999999999--------------


Q ss_pred             HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             23210334786446664488999999998620103189999999977999999987479716766882003653178982
Q gi|254780153|r  233 GRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI  312 (391)
Q Consensus       233 ~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~  312 (391)
                               .++...++.+.-++...+|+...  .-++.+.++++++.+.+.+.+...+.....  .|.     -..+..
T Consensus       256 ---------~~~~~~~~~~~q~a~~~al~~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~P~-----g~~y~~  317 (384)
T PRK06220        256 ---------QNFFICANSVVQEAGIAALKQAQ--EDVARMRQIYNERRQYMIKRLREMGFGIRV--EPT-----GAFYVL  317 (384)
T ss_pred             ---------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCC-----EEEEEE
T ss_conf             ---------86157898799999999995839--999999999999999999999975998563--898-----526885


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             47310113734567888999998886282872665-5676750-56861588899999999999999999999
Q gi|254780153|r  313 VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       313 ~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      .+......+   ...+   ...++.+.|+++--|. +...+.+ ||++...  +++.++.-++-|+.++++.+
T Consensus       318 ~~~~~~~~d---~~~~---~~~ll~~~gV~v~PG~~Fg~~~~g~iRl~f~~--~~e~l~ea~~RL~~~l~~~l  382 (384)
T PRK06220        318 ADARHLSGD---SYAL---AFDILEEAGVGVTPGIDFGNGGEGYLRFSYAN--SLENIAEGLDRLEQFLEKRL  382 (384)
T ss_pred             EECCCCCCC---HHHH---HHHHHHHCCEEEECCHHCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHHHHHH
T ss_conf             778878999---9999---99999839999977810088999979999709--99999999999999999870


No 196
>PRK07480 putative aminotransferase; Validated
Probab=99.08  E-value=1e-06  Score=62.05  Aligned_cols=327  Identities=12%  Similarity=0.061  Sum_probs=162.9

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH---HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH------HCCC-CCCE
Q ss_conf             968999986321036532898899---99999999999996889985799974873489998753------2057-8970
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK---ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW------SLLG-YRGV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~---~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~------nl~~-~~~~   93 (391)
                      +|+ |.+++.+++-..+|-+.-|.   +..-+.-++|.+++  |.++.-+++..||+.++|+++.      ...+ ++..
T Consensus        71 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~--p~~l~~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~  147 (459)
T PRK07480         71 RKE-LADAAYRQMRELPYYNTFFKTTHPPVIELAAKLAEVA--PAGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKK  147 (459)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             999-9999999997557702554557889999999999848--8875879970875899999999999999970999870


Q ss_pred             -EEEEECCHHHHHHHHHHHCC--------C---CCEEEEECCC--CCC--CCH--------HHCC------CCCCEEEEE
Q ss_conf             -79970736888887653238--------7---6306740577--765--786--------7678------556579974
Q gi|254780153|r   94 -DVLAWESFGLGWMSDIRQLS--------L---QDVREFTAPY--GSL--PDF--------SKVD------FDRDVVFVW  143 (391)
Q Consensus        94 -~~~~~g~~~~r~~~~~~~~~--------~---~~~~~~~~~~--g~~--~~~--------~~~~------~~~~v~~~h  143 (391)
                       ++...++|=++...-..--+        .   ..+..+..|+  ...  .+.        ++++      ....++.+-
T Consensus       148 ~ii~~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~v~~P~~~~~~~~~~~~~~~~~~~~~le~~i~e~~~~~iAavi  227 (459)
T PRK07480        148 VVISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGAENVAAFI  227 (459)
T ss_pred             EEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             89994586466406666633884323456888888566479874334678986787899999999999850887657876


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---CCC--CCC--EEEEECCHHCCCCC-CCCEEEEE
Q ss_conf             202420---22032------035025686148864011011025---455--685--79997001200176-65154456
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---IDF--NKL--DVVTFSAQKVLGGE-AGFGIIIL  206 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~d~--~~i--Dv~~a~sQK~l~~p-pGl~~v~~  206 (391)
                      .|+..|   +..+.      .+.+|.++++++|+|=|.+=.++-   +-+  .++  |++  ..-|+|++= .=++.+++
T Consensus       228 ~EPi~g~gG~~~~p~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDii--~~gKglggG~~Pl~av~~  305 (459)
T PRK07480        228 GEPIQGAGGVIIPPSTYWPEIQRICRKYDILLVADEVICGFGRTGEWFGHQHFGFEPDLM--TIAKGLTSGYIPMGAVIV  305 (459)
T ss_pred             ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE--EECCCCCCCCCCCEEEEE
T ss_conf             255246688422888999999998864397799973532887554542356779888689--875200289877369987


Q ss_pred             CHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             77888765411445778312320011232103347864466644889999999986201031899999999779999999
Q gi|254780153|r  207 SPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQF  286 (391)
Q Consensus       207 s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~  286 (391)
                      +++..+.....  ..    .            ...++|+.--|+ ...+...+|+.++++ ++-...+  ++..+.+.+.
T Consensus       306 ~~~i~~~~~~~--~~----~------------~~hg~T~~Gnpl-acaaala~L~~i~~~-~l~~~~~--~~~g~~l~~~  363 (459)
T PRK07480        306 GDRVAEVLIEE--GG----E------------FNHGFTYSGHPV-AAAVALANLRILRDE-GIVERVR--TDTGPYLQKR  363 (459)
T ss_pred             CHHHHHHHHCC--CC----C------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CHHHHHH--HHHHHHHHHH
T ss_conf             38999876117--87----5------------424778999979-999999999998616-2999999--9999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf             87479716766882003653178982473101137345678889999988862828726655676750568615888999
Q gi|254780153|r  287 IQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKE  366 (391)
Q Consensus       287 i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~  366 (391)
                      ++.+.. .+.+.+-.-+..+...-.++++..... ..........+...+.++|+++..     .++.+|+.--=.++.+
T Consensus       364 l~~L~~-~p~i~~vRG~Glm~giel~~~~~~~~~-~~~~~~~~~~~~~~~~~~Gll~~~-----~gn~l~l~PPL~it~~  436 (459)
T PRK07480        364 LRELAD-HPLVGEVRGVGLVGALELVKDKATRER-FAAGGGVGTICRDHCFNNGLIMRA-----VGDRMILSPPLVISRA  436 (459)
T ss_pred             HHHHHC-CCCEEEEEECCEEEEEEEECCCCCCCC-CCCHHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHH
T ss_conf             998515-996877230552899997437443445-663368999999999979949961-----6998999788238899


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999
Q gi|254780153|r  367 DLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       367 dv~~L~~aLe~~~~~~k~  384 (391)
                      +++.+++.|+.++.+.-+
T Consensus       437 eid~~l~~l~~aL~~~~~  454 (459)
T PRK07480        437 EIDELVEKARKALDLTAA  454 (459)
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999


No 197
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.07  E-value=4.9e-08  Score=70.48  Aligned_cols=326  Identities=11%  Similarity=0.033  Sum_probs=158.6

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CCCEEEEE--ECC
Q ss_conf             968999986321036532898899999999999999968899857999748734899987532057-89707997--073
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YRGVDVLA--WES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~~~~~~~--~g~  100 (391)
                      +|+ |.+++.+++-.-+|-+.+ ..+--+.-+.|.+++  |.. +.+++..|||.|.|+++.=--. .|...+..  .+.
T Consensus        66 ~p~-i~~Ai~~Ql~~~~~~~~~-~~~~~~~ae~l~~~~--p~~-~~v~F~nSGsEA~e~AlklAR~~tgr~~i~~~~~~~  140 (431)
T PRK06209         66 YPP-VVEAVREALQDGCNFTRP-SAIELDAAELFLDLI--DGA-EMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHP  140 (431)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHC--CCC-CEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf             699-999999999752655476-589999999999758--986-569872788378999999999975995377705775


Q ss_pred             HHH--HHHH--HHHHCCCCC---EEEEECCCCCCCCHHHC-C-CCCCEEEEEEECCCCEEECC-----EEEECCCCCCEE
Q ss_conf             688--8887--653238763---06740577765786767-8-55657997420242022032-----035025686148
Q gi|254780153|r  101 FGL--GWMS--DIRQLSLQD---VREFTAPYGSLPDFSKV-D-FDRDVVFVWNGTTSGVCVPD-----VGFIPESREGLV  166 (391)
Q Consensus       101 ~~~--r~~~--~~~~~~~~~---~~~~~~~~g~~~~~~~~-~-~~~~v~~~h~ETstGv~~~~-----~~~~~~~~~~ll  166 (391)
                      |..  .|..  .....+...   ......+++....++++ + ....++.+-.|...|..-|.     .+.+|+++++|+
T Consensus       141 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~y~d~~~le~~~~~~~~~iAAvIvEPi~g~~p~~~fl~~lr~lc~~~giLL  220 (431)
T PRK06209        141 FFSTDDWFIGTTPMSAGIPASVSALTKTFRYNDIASLEALFEDYPGRIACVILEPATADEPQDNFLHEVQRLCHENGALF  220 (431)
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             56435665578765578887545666564765599999987645566678885031377897899999999998729079


Q ss_pred             EEEECCH-HHHCC---CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC
Q ss_conf             8640110-11025---4556857999700120017665154456778887654114457783123200112321033478
Q gi|254780153|r  167 ICDATSA-VFARH---IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG  242 (391)
Q Consensus       167 ivD~vSs-~g~~p---~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (391)
                      |+|=|.+ |-.-.   .+.+++.=.+....|+|++==-++.++.+++..+... ....          ...+   ....+
T Consensus       221 I~DEV~TGfR~g~~~a~~~~gv~PDi~t~gK~iggG~Pi~Av~g~~eim~~~~-~~~~----------~~~~---~f~~~  286 (431)
T PRK06209        221 ILDEMITGFRWHMRGAQKLYGIVPDLSCFGKAMGNGFSISALAGKREYMELGG-LEHT----------DFER---VFLLS  286 (431)
T ss_pred             EECCCCCCCCCCCCCHHHHCCCCCCEEEEHHHHHCCCCCEEEEEHHHHHHHCC-CCCC----------CCCC---CCCCC
T ss_conf             97056026616752276620899879987013228888057778699764035-5567----------8665---41104


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CEEEEEECCCCCCCCC
Q ss_conf             644666448899999999862010318999999997799999998747971676688200365-3178982473101137
Q gi|254780153|r  243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSN-TSICMKIVDSDIASLD  321 (391)
Q Consensus       243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~-~~v~~~~~d~~~~~~~  321 (391)
                      +|+..+|+. +.+..++|+.+++++=+++..+.-+...+.+.+..++.+    ++.+-..+.. ..+.|...+.. ...+
T Consensus       287 ~T~~g~p~~-~AAalatL~~~~~~~l~~~~~~~G~~L~~~l~~l~~~~~----~~~~vr~~G~~~~~~f~~~~~~-~~~~  360 (431)
T PRK06209        287 TTHGAETHA-LAAAIATMAIYREEDVIERLWEQGAKLAAGVNEAAAEHG----LQDHVRVSGRPCCLTYSTLDGN-GQPS  360 (431)
T ss_pred             CCCCCCHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC----CCEEEEEEEEEEEEEEECCCCC-CCCH
T ss_conf             577888799-999999999998544999999999999999999997679----9779976401337899324455-6876


Q ss_pred             HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             34567888999998886282872665567675056861588899999999999999999999987751
Q gi|254780153|r  322 INSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLRA  389 (391)
Q Consensus       322 ~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~~  389 (391)
                          ..+...+...+.++|+..        + .+-|+  .+.+++||+..+++++.+|+..|..+..+
T Consensus       361 ----~~~~~~~~~~ml~~Gvl~--------~-~~~iS--~aHt~~di~~~l~a~~~al~~l~~al~~~  413 (431)
T PRK06209        361 ----QAFRTLFLQEMIRRGVLM--------P-SLVVS--YAHGDADIERTIDAVHGALGVYRRALEDG  413 (431)
T ss_pred             ----HHHHHHHHHHHHHCCEEH--------H-HHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             ----999999999999589751--------2-47760--53399999999999999999999999819


No 198
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.07  E-value=1.9e-08  Score=73.10  Aligned_cols=302  Identities=16%  Similarity=0.090  Sum_probs=159.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-...+++....   +=+.   +.+ ++.+||-+|+.+++++++++|+.+++....||.  +.+++.....+..+...
T Consensus        56 gnPT~~~LE~~la~---LEg~---~~a-~~~~SGMaAIs~~ll~ll~~Gd~iv~~~~~Yggt~~l~~~~l~~~gi~~~fv  128 (424)
T PRK06084         56 MNPTNDVLEQRVAA---LEGG---VGA-LAVASGMAAITYAIQTVAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIQTRFA  128 (424)
T ss_pred             CCHHHHHHHHHHHH---HHCC---CCE-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf             88679999999999---8599---848-9954789999999998418999899827985638999999887468615995


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEE---ECCEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--5657997420242022---03203--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVC---VPDVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~---~~~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      ...     +.+.++.  .+...+++.||.+--.   .++..  .++++++++++||-+  |-+...|+++ ++|+++-|.
T Consensus       129 d~~-----d~~~~~~~i~~~Tklv~~EsP~NPtl~v~DI~~i~~iA~~~g~~~vVDNT~atP~~~~Pl~~-GaDivvhS~  202 (424)
T PRK06084        129 AHD-----DIAALEALIDERTKAVFCESIGNPAGNIVDLQALADAAHRHGVPLIVDNTVATPVLCRPFEH-GADIVVHSL  202 (424)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf             886-----77999975487651899843899986503789999999874995995457635232680452-898899966


Q ss_pred             HHCCCCCCCC--EEEEECHHHHH-----HHHHCCCCCCCCCHHHCCHH-----------HHHHCCCCCCCCCCCCCHHHH
Q ss_conf             1200176651--54456778887-----65411445778312320011-----------232103347864466644889
Q gi|254780153|r  192 QKVLGGEAGF--GIIILSPASVE-----RLEKYVPSWPLPKIFRMVKG-----------GRVMEGLFCGETINTPSLLCI  253 (391)
Q Consensus       192 QK~l~~ppGl--~~v~~s~~al~-----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~TP~v~~i  253 (391)
                      -|-++|-.-+  |+|+.+.+...     +........  +.+-.+...           .+.......|.   +.+-+.-
T Consensus       203 TKYi~GHsDvl~G~vi~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~g~~~~i~~~r~~~~~~~G~---~lsp~da  277 (424)
T PRK06084        203 TKYMGGHGTSIGGIVVDSGKFPWAENKERFALLNTPD--PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGA---ALSPFNA  277 (424)
T ss_pred             CEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCHHH
T ss_conf             5220588760367897166114767677767753984--6766638998762678999999988750688---7882246


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCC------CCCC---CCEEEEEECCCCCCC
Q ss_conf             9999999862010318999999997799999998747971676-----6882------0036---531789824731011
Q gi|254780153|r  254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL-----AVDE------TTRS---NTSICMKIVDSDIAS  319 (391)
Q Consensus       254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~------~~rS---~~~v~~~~~d~~~~~  319 (391)
                      |   ..++-+   ..+.-|.+|+.+++..+-+|+++++.....     ...|      .+.+   ...+.|.+....   
T Consensus       278 ~---l~lRGL---~TL~lRm~~~~~nA~~iA~~L~~hp~V~~V~yPgL~shp~~~la~~~~~g~~g~~~sf~l~~~~---  348 (424)
T PRK06084        278 F---LILQGL---ETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHALARRYLGGKPAAILSFGIKGGQ---  348 (424)
T ss_pred             H---HHHCCC---CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCH---
T ss_conf             8---987577---7199999999998999999987199824798889888823999987358996248999845979---


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             37345678889999988862828726655676----------------------75-05686158889999999999999
Q gi|254780153|r  320 LDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       320 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                         +.    ...+...|.--..++.+|+..+.                      +. -+|+++|    .||++.|++-|+
T Consensus       349 ---~~----~~~f~~~L~lf~~a~SlGg~eSLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSVG----lEd~eDLi~DL~  417 (424)
T PRK06084        349 ---AA----GARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELERAGVSRDMVRLSIG----IEHIDDIIADLA  417 (424)
T ss_pred             ---HH----HHHHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHH
T ss_conf             ---99----9999984880515075787752123575154100899999865989496999762----299999999999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780153|r  377 WVFYFQ  382 (391)
Q Consensus       377 ~~~~~~  382 (391)
                      .|+...
T Consensus       418 ~AL~aa  423 (424)
T PRK06084        418 QALAAS  423 (424)
T ss_pred             HHHHHC
T ss_conf             999735


No 199
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.07  E-value=5e-07  Score=64.04  Aligned_cols=322  Identities=15%  Similarity=0.106  Sum_probs=168.0

Q ss_pred             CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEE
Q ss_conf             9689999863210--36532898899999999999999968899--85799974873489998753205--789707997
Q gi|254780153|r   24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPE--NYRIAIVPASDTGAVEMALWSLL--GYRGVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~--~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~   97 (391)
                      +|+ |.+++.+++  .+..|-..-....-.+..+.+.+++-.|.  +|.|+|..-|||.|+|+++.=.-  ..+...+..
T Consensus        57 ~p~-I~~Ai~~ql~~~~~~h~~~~~~~~~~~l~e~l~~~il~p~~l~~~v~F~~~SGSEAvE~AiKlAR~~tgr~~Iis~  135 (426)
T PRK09264         57 NPV-LKQALIDYLQRDGITHGLDMHTEAKREFLETFERLILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIISF  135 (426)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             799-9999999998548600134212899999999999735755798048955898227999999999983499859998


Q ss_pred             ECCHHHHHHHHHH--------H-CCCCCEEEEECCCCC-----CCCHHHCCC--------CCCEEEEEEECCCC---EEE
Q ss_conf             0736888887653--------2-387630674057776-----578676785--------56579974202420---220
Q gi|254780153|r   98 WESFGLGWMSDIR--------Q-LSLQDVREFTAPYGS-----LPDFSKVDF--------DRDVVFVWNGTTSG---VCV  152 (391)
Q Consensus        98 ~g~~~~r~~~~~~--------~-~~~~~~~~~~~~~g~-----~~~~~~~~~--------~~~v~~~h~ETstG---v~~  152 (391)
                      .++|=++......        . .+.........|+-.     ..+.+.++.        ...++.+-.|+..|   +..
T Consensus       136 ~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~e~~l~~~~~g~d~iAAviiEPiqg~gG~~~  215 (426)
T PRK09264        136 TNGFHGMTLGALAVTGNAHKRGGAGVPLNHVTFMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGLNV  215 (426)
T ss_pred             ECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
T ss_conf             37757874145550378434577889978817727888667870169999999876237888616999878668889824


Q ss_pred             CC------EEEECCCCCCEEEEEECCHHHHCCC-----CCCCC--EEEEECCHHCCCC--CCCCEEEEECHHHHHHHHHC
Q ss_conf             32------0350256861488640110110254-----55685--7999700120017--66515445677888765411
Q gi|254780153|r  153 PD------VGFIPESREGLVICDATSAVFARHI-----DFNKL--DVVTFSAQKVLGG--EAGFGIIILSPASVERLEKY  217 (391)
Q Consensus       153 ~~------~~~~~~~~~~llivD~vSs~g~~p~-----d~~~i--Dv~~a~sQK~l~~--ppGl~~v~~s~~al~~~~~~  217 (391)
                      |.      .+.+|.++++++|+|=|.+=.++-=     +.+++  |++  ..-|+|+|  .| ++.++.+++. +   ..
T Consensus       216 ~p~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDiv--~~gKglsGgg~P-~sav~~~~e~-d---~~  288 (426)
T PRK09264        216 ASAEWLQRLEKLCRKHDILLIVDDIQAGCGRTGTFFSFEEAGIKPDIV--TLSKSISGYGLP-MALVLIKPEL-D---QW  288 (426)
T ss_pred             CCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE--EECHHHCCCCCC-EEEEEECHHH-C---CC
T ss_conf             998999999999987075067332010778677830210479998779--886433689710-4999973444-0---46


Q ss_pred             CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf             44577831232001123210334786446664488999999998620103189999999977999999987479716-76
Q gi|254780153|r  218 VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE-NL  296 (391)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~-~~  296 (391)
                      .+                   ...++|+.--|+ ...+...+|+.+++++++   .++.+++.+.+.+.++++-.-. ..
T Consensus       289 ~~-------------------g~h~~Tf~Gnp~-a~aaa~a~L~~~~~~~~l---~~~v~~~g~~l~~~L~~l~~~~~~~  345 (426)
T PRK09264        289 KP-------------------GEHNGTFRGNNL-AFVTATAALETYWSDDAF---EKEVKRKGELVRERLEEIAAEYPGL  345 (426)
T ss_pred             CC-------------------CCCCCCCCCCCH-HHHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             77-------------------544667788829-999999999999871479---9999999999999999999768996


Q ss_pred             CCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             6882003653178-982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r  297 AVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       297 ~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      +.  +.|...... +.++++.           ....+...+.++|+++...|.  .+..+|+.--=.++.++++.+++.|
T Consensus       346 v~--dvRG~Glm~giel~~~~-----------~~~~i~~~~~~~Gll~~~~g~--~~~vir~~PPL~it~~eid~~~~~l  410 (426)
T PRK09264        346 GL--SVRGRGMMQGIDFGDGE-----------LAGKICRRAFENGLIIETSGP--NDEVVKLLPPLTIDEEELEEGLDIL  410 (426)
T ss_pred             EE--EEEEEEEEEEEEECCHH-----------HHHHHHHHHHHCCCEEEECCC--CCCEEEEECCEECCHHHHHHHHHHH
T ss_conf             27--88860289999937768-----------899999999978988964489--9988999799208899999999999


Q ss_pred             HHHHHHHHHHHHHHCC
Q ss_conf             9999999998775119
Q gi|254780153|r  376 RWVFYFQKISFLRAIS  391 (391)
Q Consensus       376 e~~~~~~k~~~~~~~~  391 (391)
                      |.++.++=..-.+.+|
T Consensus       411 ~~al~~vl~~~~~~~~  426 (426)
T PRK09264        411 EEAVAEVLAEKSESAS  426 (426)
T ss_pred             HHHHHHHHHHHHHHCC
T ss_conf             9999999961143219


No 200
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.06  E-value=3e-07  Score=65.46  Aligned_cols=298  Identities=17%  Similarity=0.134  Sum_probs=161.1

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECC
Q ss_conf             9689999863210365328988999-9999999999996889985799974873489998753205--789707997073
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~  100 (391)
                      +|+ |.+++.+++=...|-+..|.. +..++.+.|.+    ...+..+++..||+.++|+++.-.-  ..+..++...++
T Consensus        47 ~p~-i~~Ai~~ql~~~~~~~~~~~~~~~~~la~~l~~----~~~~~~v~f~~sGsEAve~AiklAr~~tgr~~ii~~~~~  121 (377)
T PRK02936         47 HPT-VTKAVQEQLDDIWHVSNLFTNSLQEEVASLLTE----NSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQS  121 (377)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHC----CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             799-999999998657886620104899999997320----688788999687778999999998875599879998785


Q ss_pred             HHHHHHHHHHHCCCCC---------EEEEECCCCCCCCHHHCC--CCCCEEEEEEECCCCE---EECC------EEEECC
Q ss_conf             6888887653238763---------067405777657867678--5565799742024202---2032------035025
Q gi|254780153|r  101 FGLGWMSDIRQLSLQD---------VREFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSGV---CVPD------VGFIPE  160 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv---~~~~------~~~~~~  160 (391)
                      |=++...-..--+...         ......|+.   +++.++  ....++.+-.|...|.   ..+.      .+.+|+
T Consensus       122 yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~p~~---d~~~l~~~~~~~iAavi~EPiqg~gG~~~~~~~yl~~lr~lc~  198 (377)
T PRK02936        122 FHGRTFGTMSATGQEKIKEGFGPLLPGFLHVPFN---DIKALEEVMNEEVAAVMLEVVQGEGGVIPADLSFLQEVQTLCK  198 (377)
T ss_pred             CCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCC---CHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             5114432001058743345778999981446745---8999985168967899997876788976899999999999999


Q ss_pred             CCCCEEEEEECCH-HHH--CCC--CCCCC--EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             6861488640110-110--254--55685--7999700120017665--1544567788876541144577831232001
Q gi|254780153|r  161 SREGLVICDATSA-VFA--RHI--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       161 ~~~~llivD~vSs-~g~--~p~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      ++++++|+|=|.+ ||-  ..+  +.+++  |++  ...|+|++  |  ++.++.+++..+..   .             
T Consensus       199 ~~gillI~DEV~tGfGRtG~~~a~e~~gv~PDii--~~gK~l~~--G~P~sav~~~~~i~~~~---~-------------  258 (377)
T PRK02936        199 KFGALLIIDEVQTGIGRTGTLFAYEQFGLEPDIV--TVAKGLGN--GIPVGAMIGKKELGSAF---T-------------  258 (377)
T ss_pred             HCCCCEECCCCCCCCCCCCCCCHHHHCCCCCCEE--EEEHHHCC--CCCCCCEECCHHHHHCC---C-------------
T ss_conf             8298457122112776556720364449887678--86201027--89873330328776303---7-------------


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf             123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M  310 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~  310 (391)
                            ....++|+.-=|+ ...+...+|+.++++.    ..++.+++.+.+.+.+...--..+.+.  +.|...... +
T Consensus       259 ------~~~~~~T~~gnpl-~~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~~~~~~~~i~--~vRG~Gl~~gi  325 (377)
T PRK02936        259 ------AGSHGSTFGGNYL-AMAAAKEVLQVIKQPS----FLEEVQEKGEYFLQKLQEELQHVECVK--NIRGKGLMIGI  325 (377)
T ss_pred             ------CCCCCCCCCCCHH-HHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHHCCCCEE--EEEECCEEEEE
T ss_conf             ------8998888985999-9999999999985111----999999999999999999843699667--71255699999


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      .+.++             ...+...+.++|+++...+    ++.+|+.--=.+++++++.+++.||.++
T Consensus       326 e~~~~-------------~~~~~~~~~~~Gll~~~~g----~~~ir~~PpL~it~~ei~~~l~~l~~aL  377 (377)
T PRK02936        326 ECTHE-------------VAPFIEQLREEGLLVLQAG----PNVIRLLPPLIVTKEELDQAVYMLKKVL  377 (377)
T ss_pred             EECCC-------------HHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             97785-------------9999999996992994368----9989996990288999999999999869


No 201
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.06  E-value=1.2e-06  Score=61.66  Aligned_cols=319  Identities=12%  Similarity=0.072  Sum_probs=167.6

Q ss_pred             CCCCCCCCC-CCHHHHHHHHHHHCCC-CCCC-C--HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHH
Q ss_conf             886888776-8968999986321036-5328-9--88999999999999999688998--57999748734899987532
Q gi|254780153|r   14 PFFSSGPCA-KRPGWSLGILEGALLG-RSHR-C--VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        14 ~~F~pGP~~-~~p~~v~~~~~~~~l~-~sHR-s--~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~n   86 (391)
                      .+|+-|=.. -+|..+++++...+.. ..|. +  .--.++-+.+.+.+++-++.+-+  .+| +.+.|++.++..++..
T Consensus        33 i~l~iG~pdf~~P~~i~~a~~~a~~~~~~~gY~~~~G~~~lR~aIa~~~~~~~g~~~~pe~~V-~~t~G~~~al~~~~~a  111 (388)
T PRK07366         33 IDLSLGSSDLPAPAHALEAIAQSLQDPSTHGYLLFHGTLPFREAAAAWYEQRFGLAVDPETEV-LPLIGSQEGTAHLPLA  111 (388)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHH
T ss_conf             987086899998899999999998097676789875789999999999999978988988739-9847889999999999


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE---
Q ss_conf             0578970799707368888876532387630674--05777657867678-----5565799742024202203203---
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG---  156 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~---  156 (391)
                      ++.+||.+++..=.|-.- ...+...+ ..+..+  ..+.+..+++++++     ..+.+.++.=..-||...+..+   
T Consensus       112 l~~pGD~Vli~~P~Y~~y-~~~~~~~G-~~~~~vpl~~~~~~~~d~~~l~~~i~~~tk~iil~~P~NPTG~v~s~~~l~~  189 (388)
T PRK07366        112 LLNPGDFALLLDPGYPSH-AGGVYLAG-GQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQE  189 (388)
T ss_pred             HCCCCCEEEEECCCCCCH-HHHHHHCC-CEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEHHHHHH
T ss_conf             669999899825877651-89999859-8579975466679847999998740422829998589898466803888888


Q ss_pred             --EECCCCCCEEEEEECCH---HHH-CC------CCCC-CCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCC
Q ss_conf             --50256861488640110---110-25------4556-8579997001200176651--54456778887654114457
Q gi|254780153|r  157 --FIPESREGLVICDATSA---VFA-RH------IDFN-KLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSW  221 (391)
Q Consensus       157 --~~~~~~~~llivD~vSs---~g~-~p------~d~~-~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~  221 (391)
                        .+|.+++..+|.|-+=+   +.+ .+      .+.. ..-+.+.|.-|.++. ||+  |.++.+++.+++....+.. 
T Consensus       190 i~~~a~~~~i~lisDEiY~~l~~~~~~~~p~~~~~~~~~~~~i~~~S~SK~f~~-~G~RiG~~i~~~~li~~~~~~~~~-  267 (388)
T PRK07366        190 AVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNM-GGFRIGFAIGNAQLIAALRQIKAV-  267 (388)
T ss_pred             HHHHHHHCCEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCC-CCCEEEEEECCHHHHHHHHHHHHH-
T ss_conf             999874055078622021445866876661354257220617997335325788-765189996799999999999875-


Q ss_pred             CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                            +.++++.....+...++..  .+.-++.+.+.++++.+.+.+.+++.+ +...  .|+
T Consensus       268 ----------------------~~~~~~~~~~~~a~~al~~--~~~~~~~~~~~~~~rr~~~~~~L~~~g-~~~~--~P~  320 (388)
T PRK07366        268 ----------------------VDFNQYRGILNGAIAALTG--PQACVQQTVQIFRQRRDAFINALHRIG-WPVP--LPE  320 (388)
T ss_pred             ----------------------CCCCCHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEE--CCC
T ss_conf             ----------------------4765439999999999968--889999999999999999999999779-8750--798


Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             0365317898247310113734567888999998886282872665-5676750-5686158889999999999999
Q gi|254780153|r  302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                        +..-+-..++....  .+   ...+   ...++.+.|+++--|. +...+.+ +|++.-.  +++.++.-++-|+
T Consensus       321 --g~~y~w~~l~~~~~--~~---~~ef---~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~~a~--~~~~l~eal~Rl~  385 (388)
T PRK07366        321 --ATMYVWAKLPEPWQ--GN---SVEF---CTQLVAQTGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIA  385 (388)
T ss_pred             --EEEEEEEECCCCCC--CC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEECC--CHHHHHHHHHHHH
T ss_conf             --57799787898788--99---8999---99999839999976646588999869999629--9999999999999


No 202
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.06  E-value=2.9e-07  Score=65.61  Aligned_cols=309  Identities=14%  Similarity=0.052  Sum_probs=158.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCC-CEE
Q ss_conf             968999986321036532898899-99999999999996889985799974873489998753205-------789-707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYR-GVD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~-~~~   94 (391)
                      +|+ |.+++.+++-...|-+..|. +-..+.-+.|.+..  +.+ +|+| ..|||.|+|+++.=-.       .++ ...
T Consensus        53 ~p~-i~~Ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~--~~~-~v~f-~~sGsEA~e~AlklAr~~~~~~~~~~k~~i  127 (397)
T TIGR03246        53 HPE-LVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDAT--FAD-KVFF-CNSGAEANEAALKLARRYALDKHGADKSEI  127 (397)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCC-EEEE-CCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             889-99999999965777768634889999999997514--877-6997-286778999999999999985179997689


Q ss_pred             EEEECCHHHHHHHHHHHCCCCCE---------EEEECCCCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC------
Q ss_conf             99707368888876532387630---------67405777657867678--556579974202420---22032------
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLSLQDV---------REFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD------  154 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~------  154 (391)
                      +...++|-++...-...-+....         .....++.   +++.++  ..+.++.+-.|...|   +..|.      
T Consensus       128 is~~~~yHG~t~~~~s~~~~~~~~~~~~p~~~~~~~~~~~---d~~~~~~~~~~~iaAvi~EPv~g~gG~~~~~~~yl~~  204 (397)
T TIGR03246       128 VAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN---DLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKG  204 (397)
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC---CHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             9972786898564104689965567888999764204523---3999998528873799993877888987388899999


Q ss_pred             EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             0350256861488640110-110--254--55685799970012001766515445677888765411445778312320
Q gi|254780153|r  155 VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       155 ~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
                      .+.+|+++++++|+|=|.+ ||-  .-+  +.+++.=.+....|+|++=-=++.++.+++..+...   .          
T Consensus       205 lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~P~sav~~~~~i~~~~~---~----------  271 (397)
T TIGR03246       205 LRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGGFPIGAMLTTTEIAAHLK---V----------  271 (397)
T ss_pred             HHHHHHHCCCEEECCCEEECCCCCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEEEECHHHHHHCC---C----------
T ss_conf             999999859358634122078777783143226989987887422468840489974488886518---7----------


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf             01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC  309 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~  309 (391)
                               ...++|+..-|+. ..+..++|+.+++++=++    +.+++.+.+.+.+.....-...+.+  .|......
T Consensus       272 ---------~~h~~T~~gnpl~-~aaala~L~~i~~e~l~~----~~~~~g~~l~~~L~~l~~~~~~i~~--VRG~Glm~  335 (397)
T TIGR03246       272 ---------GTHGTTYGGNPLA-CAVAGKVLDLVNTPELLA----GVKQRHDLFVDGLEKINARYNVFSE--IRGKGLLI  335 (397)
T ss_pred             ---------CCCCCCCCCCHHH-HHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHHHCCCEEE--EEECCEEE
T ss_conf             ---------7738668829999-999999999998547999----9999999999999998741798775--42243599


Q ss_pred             -EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             -9824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  310 -MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       310 -~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                       +.+.++.         ....+.+...+.++|+++...+    ++.+|+.---.+++++++.+++.||.++.++
T Consensus       336 giel~~~~---------~~~a~~i~~~~~~~Gll~~~~g----~n~lrl~PPL~it~eeid~~l~~l~~al~~v  396 (397)
T TIGR03246       336 GAVLTEAY---------QGKAKQFVNAAAEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERAIEQV  396 (397)
T ss_pred             EEEECCCC---------CCHHHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99972786---------3359999999997892893079----9979997885189999999999999999986


No 203
>PRK03262 consensus
Probab=99.06  E-value=1e-06  Score=62.09  Aligned_cols=279  Identities=16%  Similarity=0.188  Sum_probs=161.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCCEEE
Q ss_conf             289889999999999999996889985799974873489998753205789-7079970736888887653238763067
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGWMSDIRQLSLQDVRE  119 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~  119 (391)
                      ||=|+-.  ..+.++.|.+.++++.+ .|++ ..|++..+..++..++++| +.+++..-.|+..  ...++..+..+..
T Consensus        52 nrYPD~~--~~~Lr~aiA~~~gv~~~-~I~v-GnGSdE~I~~i~~~f~~pg~d~vl~~~PtF~~Y--~~~a~~~g~~~~~  125 (355)
T PRK03262         52 NRYPECQ--PKAVIENYAQYAGVKPE-QVLV-SRGADEGIELLIRAFCEPGKDAILYCPPTYGMY--AVSAETIGVEIRT  125 (355)
T ss_pred             CCCCCCC--HHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHCCCEEEE
T ss_conf             0398998--89999999998685855-7999-378999999999998638997799778885999--9999973983899


Q ss_pred             EECCCCCCCCHHH----CCCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-HHHCC--CC-CCCC-EE
Q ss_conf             4057776578676----7855657997420242022032035---025-6861488640110-11025--45-5685-79
Q gi|254780153|r  120 FTAPYGSLPDFSK----VDFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA-VFARH--ID-FNKL-DV  186 (391)
Q Consensus       120 ~~~~~g~~~~~~~----~~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs-~g~~p--~d-~~~i-Dv  186 (391)
                      +........+++.    ++..+.+.+|.=..-||...+..++   +.. ..++++|+|-.=. |...+  .+ ..+. .+
T Consensus       126 vp~~~~~~~dl~~~~~~~~~~klv~l~nPNNPTG~~~~~~el~~l~~~~~~~~lvVvDEAY~eF~~~~s~~~l~~~~~Nl  205 (355)
T PRK03262        126 VPTLENWQLDLQAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPNL  205 (355)
T ss_pred             EECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCHHHHHHCCCCE
T ss_conf             64655667689999964048888997689998764469999999997687672898730255436562155676407744


Q ss_pred             -EEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             -997001200176651--54456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r  187 -VTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL  263 (391)
Q Consensus       187 -~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i  263 (391)
                       +.=+--|.+| -||+  |.++.+++.++...+...++..                      |++   ...+...+|.  
T Consensus       206 iVlRTfSK~~g-LAGlRlGy~ia~~~ii~~l~k~~~p~~v----------------------n~~---~~~~a~~al~--  257 (355)
T PRK03262        206 VILRTLSKAFA-LAGLRCGFTLANEEVINLLLKVIAPYPL----------------------STP---VADIAAQALS--  257 (355)
T ss_pred             EEEECHHHHHC-CCCCCEEEEECCHHHHHHHHHHCCCCCC----------------------CHH---HHHHHHHHHC--
T ss_conf             67612677724-6653505431799999999984389987----------------------799---9999999972--


Q ss_pred             HCCCCH---HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             010318---99999999779999999874797167668820036531789824731011373456788899999888628
Q gi|254780153|r  264 KKMGGL---SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEE  340 (391)
Q Consensus       264 ~~~gGl---~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g  340 (391)
                       .+ ++   ....+...+..+.+++.+.+.++++..     +-|.+|-.+.-..+             ...+.+.|.++|
T Consensus       258 -~~-~~~~~~~~i~~i~~~R~~l~~~L~~l~~~~~v-----~pS~aNFvl~~~~~-------------~~~~~~~L~~~g  317 (355)
T PRK03262        258 -PQ-GIEAMRERVAQINANRAWLIAALKEIACVEQV-----FDSETNYILARFTA-------------SSAVFKSLWDQG  317 (355)
T ss_pred             -CC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-----CCCCCCEEEEECCC-------------HHHHHHHHHHCC
T ss_conf             -26-59999999999999999999999848998606-----89978289997899-------------999999999699


Q ss_pred             EEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             28726-6556767505686158889999999999999
Q gi|254780153|r  341 IAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       341 ~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      +++.- ..+......+||+.+   ++++.++|+++|.
T Consensus       318 IlVR~~~~~~gl~~~lRisig---t~een~~~l~aLk  351 (355)
T PRK03262        318 IILRDQNKQPSLSNCLRITIG---TREECQRVIDALR  351 (355)
T ss_pred             CEEEECCCCCCCCCEEEEECC---CHHHHHHHHHHHC
T ss_conf             389668887899998999669---9999999999971


No 204
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.05  E-value=7.7e-07  Score=62.87  Aligned_cols=294  Identities=11%  Similarity=0.019  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf             68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r   25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG  104 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r  104 (391)
                      |..+++++...+-. -+|=|+-  -..+.++.+.+.++++.+ .|++.. |++..+..++..+ .+ +.+++..=.|+..
T Consensus        34 p~~v~~a~~~~~~~-l~~YPd~--~~~~Lr~aiA~~~gv~~~-~I~~gn-Gs~e~i~~~~~~~-~~-~~v~i~~Ptf~~Y  106 (354)
T PRK06358         34 PESVKDAITENLDK-LVEYPDI--DYLELRKRIASFEQLDLE-NVILGN-GAAEVIFNIVRVL-KP-KKVLILAPTFSEY  106 (354)
T ss_pred             CHHHHHHHHHHHHH-HCCCCCC--CHHHHHHHHHHHHCCCHH-HEEECC-CHHHHHHHHHHHC-CC-CEEEEECCCHHHH
T ss_conf             99999999998766-1018999--779999999998783879-999868-7899999999861-89-9699979887999


Q ss_pred             HHHHHHHCCCCCEEEEEC--CCCCCCCHHH---CCC-CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECC-
Q ss_conf             887653238763067405--7776578676---785-5657997420242022032035-----025686148864011-
Q gi|254780153|r  105 WMSDIRQLSLQDVREFTA--PYGSLPDFSK---VDF-DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATS-  172 (391)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~---~~~-~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vS-  172 (391)
                        ..+.+..+..+.....  ..+..++.+.   +.. .+.+.++.=..-||...+..+.     .+..++.++|+|-.= 
T Consensus       107 --~~~~~~~g~~v~~~~l~~~~~~~~~~~~l~~~~~~~~~v~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~~vviDEaY~  184 (354)
T PRK06358        107 --ERALKSVDAEVIYYELKEETNFAINEDVLEKITEEIDLIFLCNPNNPTGQLISKEELKKILEKCEKKNIYVIIDEAFM  184 (354)
T ss_pred             --HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHH
T ss_conf             --999998498678997770038887999997445577789996899986640679999999987201787999964056


Q ss_pred             HHHHCC--CC----CCCC-E-EEEECCHHCCCCCCCC--EEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCC
Q ss_conf             011025--45----5685-7-9997001200176651--544567788-8765411445778312320011232103347
Q gi|254780153|r  173 AVFARH--ID----FNKL-D-VVTFSAQKVLGGEAGF--GIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFC  241 (391)
Q Consensus       173 s~g~~p--~d----~~~i-D-v~~a~sQK~l~~ppGl--~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (391)
                      .|...+  ..    ..+. . ++.-+--|.+| -||+  |.++.+++. .++..+...                      
T Consensus       185 ef~~~~~~~s~~~~~~~~~nlivlrSfSK~~g-laGlRiGy~i~~~~~i~~~l~~~~~----------------------  241 (354)
T PRK06358        185 DFVEENETISMIKYLENFKNLIIIRAFTKFFA-IPGLRLGYGLCSNKNLIEKLNQMRE----------------------  241 (354)
T ss_pred             HHHCCCCCCCHHHHHHHCCCEEEEEECCHHHC-CCCHHEEEEEECCHHHHHHHHHCCC----------------------
T ss_conf             76368876667888752376689972516636-7662115654287999999984589----------------------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCC
Q ss_conf             86446664488999999998620103189999999977999999987479716766882003653178-98247310113
Q gi|254780153|r  242 GETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASL  320 (391)
Q Consensus       242 ~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~  320 (391)
                         ++.-+.+...+...+|+.   +.=++...+...+..+.+++.+.+.+++..+.      |.+|.. ++++++     
T Consensus       242 ---p~~vn~~a~~aa~aal~d---~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p------s~anFvl~~~~~~-----  304 (354)
T PRK06358        242 ---PWSINTFADLAGRVLLED---KNYIKKTIQWIKKEKEFLYNGLSEFKGLTVYE------PSVNFIFFKLNKP-----  304 (354)
T ss_pred             ---CCCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC------CCCEEEEEEECCH-----
T ss_conf             ---988269999999999529---99999999999999999999987499968889------9848999983987-----


Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEECC-CCCCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             7345678889999988862828726-655676750-5686158889999999999999999
Q gi|254780153|r  321 DINSQKSFCKSMLSFLEKEEIAYDI-GSYRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       321 ~~~~~~~~~~~~~~~l~~~g~~~~~-~~~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                               .++...|.++|+++.- ..++..+.+ +||+.+   ++++.++|+++|+..+
T Consensus       305 ---------~~~~~~L~~~gIlVr~~~~f~~l~~~~iRisvg---t~~en~~ll~aL~~iL  353 (354)
T PRK06358        305 ---------IDLRKELLLKGILIRSCSNYRGLDENYYRVAVK---SREDNKKLLEALSVIL  353 (354)
T ss_pred             ---------HHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHH
T ss_conf             ---------999999985991999788778889997999628---9999999999999974


No 205
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.05  E-value=2.1e-07  Score=66.52  Aligned_cols=306  Identities=13%  Similarity=0.123  Sum_probs=161.2

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---------CCC-C
Q ss_conf             968999986321036532898899-99999999999996889985799974873489998753205---------789-7
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---------GYR-G   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---------~~~-~   92 (391)
                      +|+ |.+++.+++-...|-+..|. +-..+..+.|.   ..+...+++|. .|||.+.|+++.-..         ..+ .
T Consensus        62 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~l~~~l~---~~~~~~~v~f~-~SGsEAve~AiklAr~~~~~~~g~~tgr~  136 (404)
T PRK00854         62 HPK-ILAAMVEQAGRLTLTSRAFRNDQLAPLYEELA---ALTGSHKVLPM-NSGAEAVETAIKAVRKWGYEVKGVPEGQA  136 (404)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH---HCCCCCEEEEC-CCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             799-99999999856786555426579999999997---40376848855-87799999999999998765037878985


Q ss_pred             EEEEEECCHHHHHHHHHHHCCCCCEE---------EEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------
Q ss_conf             07997073688888765323876306---------7405777657867678556579974202420---22032------
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------  154 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------  154 (391)
                      .++...++|-++......--......         ....|++....++.. ...+.+.+-.|...|   +..|.      
T Consensus       137 ~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~d~~~l~~~-~~~~~aAviiEPiqg~gG~~~~~~~yl~~  215 (404)
T PRK00854        137 EIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPFGDAAALEAA-ITPNTVAFLIEPIQGEAGVIIPPAGYFRR  215 (404)
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHH-HCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             59996456678601354346774335688899998155056668999986-39874899991775778961799899999


Q ss_pred             EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             035025686148864011011025---4--5568579997001200176-651544567788876541144577831232
Q gi|254780153|r  155 VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIFR  228 (391)
Q Consensus       155 ~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~~  228 (391)
                      .+.+|+++++++|+|=|.+=.++-   +  +..++--.+...-|+|++= .-++.++.+++..+...   +         
T Consensus       216 lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDii~~gKgl~gG~~Pl~av~~~~~i~~~~~---~---------  283 (404)
T PRK00854        216 VRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLR---P---------  283 (404)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCEEECCHHHHHHCC---C---------
T ss_conf             9999997076445750001786355741455424897989756444588765320204799995067---9---------


Q ss_pred             CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf             00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r  229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI  308 (391)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v  308 (391)
                                ...++|+.- +-....+..++|+.+++++    ..++.+++.+.+.+.+....  .+++.  +.|.....
T Consensus       284 ----------~~h~~T~~g-npla~aaa~a~l~~i~~e~----l~~~~~~~g~~l~~~L~~l~--~~~i~--~VRG~Glm  344 (404)
T PRK00854        284 ----------GQHGSTFGG-NPLACAVARAALRVLVEEG----MIENAAEQGAYFLEGLRAIR--GNIVR--EVRGRGLM  344 (404)
T ss_pred             ----------CCCCCCCCC-CHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHCC--CCCEE--EEEECCEE
T ss_conf             ----------887788898-9899999999999998658----99999999999999998504--89727--66444559


Q ss_pred             E-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             8-98247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r  309 C-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       309 ~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      . +.+ ++.         ....+.+...+.+.|+++.. .   .+..+|+.--=.++.++++.+++.||.+++
T Consensus       345 ~gve~-~~~---------~~~~~~~~~~~~~~Gll~~~-~---~~~~ir~~PPL~it~~eid~~l~~l~~~La  403 (404)
T PRK00854        345 LAVEL-EPE---------AGGARQYCEALKARGLLAKD-T---HDHTIRLAPPLVITREQVDWAVSQIAKVLA  403 (404)
T ss_pred             EEEEE-ECC---------HHHHHHHHHHHHHCCEEECC-C---CCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf             99998-556---------67799999999979959874-8---999899979957899999999999999966


No 206
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.04  E-value=1.4e-06  Score=61.19  Aligned_cols=282  Identities=13%  Similarity=0.103  Sum_probs=159.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCCEEE
Q ss_conf             289889999999999999996889985799974873489998753205789-7079970736888887653238763067
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGWMSDIRQLSLQDVRE  119 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~  119 (391)
                      +|=|+  .-..+.++.|.+.++++.+ .|++ .-|+...+..++..++.++ +.+++..-.|+..  ..+++..+..+..
T Consensus        52 ~RYPD--~~~~~Lr~~lA~~~gv~~~-~I~~-GnGSdE~I~ll~~a~~~pg~d~vl~~~PtF~~Y--~~~a~~~g~~~~~  125 (362)
T PRK04781         52 RRYPD--PQPKGLRSALAALYGCAPE-QLLI-GRGSDEAIDLLVRGLCVPERDAVLVTPPVFGMY--AVCARLQNAPLVE  125 (362)
T ss_pred             CCCCC--CCHHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHCCCEEEE
T ss_conf             47989--9889999999998686955-7998-367899999999999558985488479746899--9999983987999


Q ss_pred             EE---CCCCCCCCHHHC------CCCCCEEEEEEECCCCEEECCEEE--EC-C-CCCCEEEEEECC-HHHHCC--CC-CC
Q ss_conf             40---577765786767------855657997420242022032035--02-5-686148864011-011025--45-56
Q gi|254780153|r  120 FT---APYGSLPDFSKV------DFDRDVVFVWNGTTSGVCVPDVGF--IP-E-SREGLVICDATS-AVFARH--ID-FN  182 (391)
Q Consensus       120 ~~---~~~g~~~~~~~~------~~~~~v~~~h~ETstGv~~~~~~~--~~-~-~~~~llivD~vS-s~g~~p--~d-~~  182 (391)
                      +.   .+.+...+++.+      +..+.+.+|+=..-||...+..++  +. . ..++++|||=.= .|...+  ++ ..
T Consensus       126 vpl~~~~~~f~~d~~~~~~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~~~~~~~~~~lvvvDEAY~eF~~~~s~~~l~~  205 (362)
T PRK04781        126 VPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIETALQALQGKALVVVDEAYGEFSDVPSAVGLLA  205 (362)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCHHHHHH
T ss_conf             95755512467799999988526798889986898973556798999999975799808998341655257843445765


Q ss_pred             CC-EE-EEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             85-79-99700120017665--1544567788876541144577831232001123210334786446664488999999
Q gi|254780153|r  183 KL-DV-VTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYID  258 (391)
Q Consensus       183 ~i-Dv-~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~  258 (391)
                      +. .+ +.=+--|.+| -||  +|+++.+++.++...+.+.++                         .-++....+...
T Consensus       206 ~~~NliVlRTfSK~yg-LAGlRlGy~ia~~~~i~~l~k~~~p~-------------------------~v~~~a~~~a~~  259 (362)
T PRK04781        206 RYDNLAVLRTLSKAHA-LAAARIGSLIANAELIAVLRRCQAPY-------------------------PVPTPCAAMAEQ  259 (362)
T ss_pred             CCCCEEEEECHHHHHH-CCCCCEEEEECCHHHHHHHHHHCCCC-------------------------CCCHHHHHHHHH
T ss_conf             1785453314058740-75535044417999999999821798-------------------------875999999999


Q ss_pred             HHHHHHCCCCHHHHHHH---HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             99862010318999999---997799999998747971676688200365317898-24731011373456788899999
Q gi|254780153|r  259 ALLWLKKMGGLSACVER---CNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQKSFCKSMLS  334 (391)
Q Consensus       259 ~l~~i~~~gGl~~~~~r---~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~~~~~~~~~  334 (391)
                      +|+    ..+++...++   .....+.+++.+...+++...     +-|.+|..+. +++              .+.+.+
T Consensus       260 al~----~~~~~~~~~~v~~i~~eR~~l~~~L~~l~g~~~v-----~pS~aNFil~~~~~--------------a~~~~~  316 (362)
T PRK04781        260 ALS----APALAVTARRVAEVRAERERLHAALAQLPGVRQV-----YPSQGNFLLVRFDD--------------AEAAFQ  316 (362)
T ss_pred             HHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-----CCCCCEEEEEECCC--------------HHHHHH
T ss_conf             960----7669999999999999999999999847898556-----89988499987799--------------999999


Q ss_pred             HHHHCCEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             8886282872-665567675056861588899999999999999999
Q gi|254780153|r  335 FLEKEEIAYD-IGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       335 ~l~~~g~~~~-~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      .|.++|+++. ...+...+..+||+.+   ++++.++|+++|+...+
T Consensus       317 ~L~~~gIlVR~~~~~p~l~~~lRisig---t~een~~ll~aL~~i~e  360 (362)
T PRK04781        317 ALLAAGVVVRDQRAVPRLSDALRITIG---TPEQNDRVLAALQRTQE  360 (362)
T ss_pred             HHHHCCCEEEECCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHH
T ss_conf             999499399707887899997999809---99999999999999996


No 207
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.04  E-value=8.2e-07  Score=62.69  Aligned_cols=320  Identities=13%  Similarity=0.072  Sum_probs=171.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             96899998632103653289889--999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|+ +.+++.+++-...|-+..+  .+-..+.-+.|.+++-.....+++|. .|||.|+|+++.=.-  ..+..++...+
T Consensus        58 ~p~-i~~Ai~~Ql~~l~~~~~~~~~~~~~~~lae~l~~~~p~~g~~~v~f~-~SGSEAve~AiKlAr~~tgr~~ii~~~~  135 (421)
T PRK06777         58 HPK-VMAAVRQQLDQFTHTAYQIVPYASYVTLAERINSLAPISGNSKTAFF-TTGAEAVENAVKIARAATGRPGVIAFSG  135 (421)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE-CCHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             899-99999999861357455455666999999999974776676449996-7827899999999998639996377578


Q ss_pred             CHHHHHHHHHHHCCCC------------CEEEEECCCCC-CCCH----HHCC-------CCCCEEEEEEECCCC---EEE
Q ss_conf             3688888765323876------------30674057776-5786----7678-------556579974202420---220
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQ------------DVREFTAPYGS-LPDF----SKVD-------FDRDVVFVWNGTTSG---VCV  152 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~------------~~~~~~~~~g~-~~~~----~~~~-------~~~~v~~~h~ETstG---v~~  152 (391)
                      +|=++...-..--+..            .+.....|... ....    +.++       ....++.+-.|...|   +..
T Consensus       136 syHG~t~~a~s~tg~~~~~~~~~~p~p~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAvi~EPiqg~gG~~~  215 (421)
T PRK06777        136 AFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELYGVSVEEAISSVERLFRCDISPTQVAAILLEPIQGEGGFNI  215 (421)
T ss_pred             CCCCCCHHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEE
T ss_conf             76996343300158877544677899986022368972246568999999999997505888589999835437888640


Q ss_pred             CC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCC
Q ss_conf             32------035025686148864011011025---4--556857999700120017665154456778887654114457
Q gi|254780153|r  153 PD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSW  221 (391)
Q Consensus       153 ~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~  221 (391)
                      +.      .+.+|+++++++|+|=|.+=.++-   +  +..++.=.+...-|+|++=-=++.++.+++..+..   .   
T Consensus       216 ~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~P~~av~~~~~i~~~~---~---  289 (421)
T PRK06777        216 APPEFVSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDTKVDLITMAKSLGGGMPISAVTGRADVMDAP---L---  289 (421)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCEEEEEECHHHHCCC---C---
T ss_conf             9999999999999983977971121106775678434315877797887440025876507898627875257---8---


Q ss_pred             CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                      ....++|+.--|+ ...+..++|+.+++++    +.+|.+++.+.+.+.+++...-.+.+.+  
T Consensus       290 ----------------~~~~~~Tf~G~pl-~caaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~~~p~v~d--  346 (421)
T PRK06777        290 ----------------PGGLGGTYAGNPL-AVAAALAVLDVIAEEK----LCERALILGAKLVEVLEKAQMSNAAIVG--  346 (421)
T ss_pred             ----------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCEEE--
T ss_conf             ----------------8763788998989-9999999999998635----9999999999999999998855898898--


Q ss_pred             CCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             03653178-98247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r  302 TRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       302 ~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      .|...... +.+.|+....-..    ...+.+...+.++|+++...|.  .++.+|+.--=.++.++++..++.||.+++
T Consensus       347 VRG~GL~~gie~~d~~~~~~~~----~~~~~i~~~~~~~Glll~~~g~--~~nvir~~PPL~it~~eid~~~~il~~aL~  420 (421)
T PRK06777        347 IRARGSMVAVEFNDPVTGKPSP----ELTRAYQRQALEEGLLLLSCGV--HGNVIRFLYPLTIPDKQFKKAMNILTRLLA  420 (421)
T ss_pred             EECCEEEEEEEECCCCCCCCCH----HHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf             6236489999971687789589----9999999999978988984589--999899979954789999999999999974


No 208
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.04  E-value=1.3e-06  Score=61.43  Aligned_cols=327  Identities=11%  Similarity=0.032  Sum_probs=174.4

Q ss_pred             CCCCCCCCC-CCHHHHHHHHHHHCCC-CCC-CC--HHHHHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHHHHHH
Q ss_conf             886888776-8968999986321036-532-89--889999999999999996889985--7999748734899987532
Q gi|254780153|r   14 PFFSSGPCA-KRPGWSLGILEGALLG-RSH-RC--VLGKERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        14 ~~F~pGP~~-~~p~~v~~~~~~~~l~-~sH-Rs--~~f~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea~~~n   86 (391)
                      .+|+-|=.. -+|..+++++...+-. ..| -+  .-..++-+.+-+.+++-+++.-+-  +|+ ++.|++.++..++..
T Consensus        36 i~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~gY~~~~G~~eLR~aia~~~~~~~g~~~~p~~~I~-vt~Ga~~al~~~~~a  114 (403)
T PRK08636         36 IDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPDTEVV-ATMGSKEGYVHLVQA  114 (403)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE-EECCHHHHHHHHHHH
T ss_conf             8897968999879999999999976998878999747299999999999997099999987499-917989999999999


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC--CCCC-------CCCHHHC-----CCCCCEEEEEEECCCCEEE
Q ss_conf             057897079970736888887653238763067405--7776-------5786767-----8556579974202420220
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA--PYGS-------LPDFSKV-----DFDRDVVFVWNGTTSGVCV  152 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~--~~g~-------~~~~~~~-----~~~~~v~~~h~ETstGv~~  152 (391)
                      ++++||.+++..=.|.... ..+...+ ..+..+..  ..+.       ..+++..     +..+.+.++.=..-||...
T Consensus       115 l~~pGD~Vli~~P~Y~~y~-~~~~~~g-~~~~~~~l~~~~~~~~d~~~~~~~le~~~~~~~~ktk~iiln~P~NPTG~v~  192 (403)
T PRK08636        115 ITNPGDVAIVPDPAYPIHS-QAFILAG-GNVHKMPLEYNEDFELDEDKFFENLEKALRESSPKPKYVVVNFPHNPTTATV  192 (403)
T ss_pred             HCCCCCEEEECCCCCCCHH-HHHHHCC-CEEEEEECCCCCCCCCCHHHHHHCHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf             7799998997788870389-9999849-9689974335777424666520258998762688717999899989988788


Q ss_pred             CCEE-----EECCCCCCEEEEEECCHHH---HCC----CCCC---CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHH
Q ss_conf             3203-----5025686148864011011---025----4556---857999700120017665--154456778887654
Q gi|254780153|r  153 PDVG-----FIPESREGLVICDATSAVF---ARH----IDFN---KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLE  215 (391)
Q Consensus       153 ~~~~-----~~~~~~~~llivD~vSs~g---~~p----~d~~---~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~  215 (391)
                      +...     .+|..++.++|.|-+=+-.   +.+    +...   ...+...|.-|.++ .||  +|.++..++.++...
T Consensus       193 s~~~l~~i~~la~~~~i~visDEiY~~l~~~g~~~~s~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~ii~~~~li~~~~  271 (403)
T PRK08636        193 EKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYN-MAGWRVGFVVGNKKLIGALK  271 (403)
T ss_pred             CHHHHHHHHHHHHHCCEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCEEEEEECCHHHHHHHH
T ss_conf             99999999999986593899626400000179878741027530013322244200257-76412899973999999999


Q ss_pred             HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             11445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r  216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN  295 (391)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~  295 (391)
                      ..+.         +             ....++ +..-++...+|+.-  +.-++.+.++++++.+.+.+.+...+ +..
T Consensus       272 ~~~~---------~-------------~~~~~~-~~~q~aa~~al~~~--~~~~~~~~~~y~~rr~~l~~~l~~~g-~~~  325 (403)
T PRK08636        272 KIKS---------W-------------LDYGMF-TPIQVAATIALDGD--QSCVEEIRETYEKRRDVLIKSFENAG-WEL  325 (403)
T ss_pred             HHHH---------H-------------CCCCCC-HHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEE
T ss_conf             9998---------6-------------346856-89999999998398--99999999999999999999998659-700


Q ss_pred             CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHH
Q ss_conf             6688200365317898247310113734567888999998-886282872665-567675-0568615888999999999
Q gi|254780153|r  296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLC  372 (391)
Q Consensus       296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~  372 (391)
                      ..  |+  +..-+-..+++... ..+       ..++... +.+.|+++--|. ....|. -+|++..  .+++.++.-+
T Consensus       326 ~~--P~--g~~y~w~~l~~~~~-~~~-------~~ef~~~ll~~~gV~v~PG~~Fg~~g~~~vRisf~--~~~e~l~ea~  391 (403)
T PRK08636        326 QK--PR--ASMFVWAKIPEPFR-HLG-------SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAA  391 (403)
T ss_pred             CC--CC--CEEEEEEECCCCCC-CCC-------HHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHH
T ss_conf             37--88--10389787875447-899-------89999999974979998875328899987999971--8999999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  373 DWLRWVFYFQKI  384 (391)
Q Consensus       373 ~aLe~~~~~~k~  384 (391)
                      +.|+.++++.|+
T Consensus       392 ~Rl~~~l~e~~~  403 (403)
T PRK08636        392 RNIKKFLKEFEA  403 (403)
T ss_pred             HHHHHHHHHHCC
T ss_conf             999999998449


No 209
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.04  E-value=3.7e-07  Score=64.90  Aligned_cols=328  Identities=15%  Similarity=0.091  Sum_probs=187.8

Q ss_pred             CCCCCCCCCC-CCCHHHHHHHHHHHCCCCC-CCC--HHHHHHHHHHHHHHHHHHCCC--CCCEEEEECCCCHHHHHHHHH
Q ss_conf             9888688877-6896899998632103653-289--889999999999999996889--985799974873489998753
Q gi|254780153|r   12 KRPFFSSGPC-AKRPGWSLGILEGALLGRS-HRC--VLGKERINKAIQLTRKVLEVP--ENYRIAIVPASDTGAVEMALW   85 (391)
Q Consensus        12 ~~~~F~pGP~-~~~p~~v~~~~~~~~l~~s-HRs--~~f~~i~~~~~~~l~~l~~~p--~~y~v~~l~GsgT~~~ea~~~   85 (391)
                      +-.+|+-|-. --.|..+.+++...+..-. |-+  .-..++-+.+.+.+.+-+++.  .+.+| +++.|++.++-.++.
T Consensus        29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~ei-ivt~Ga~~al~~a~~  107 (393)
T COG0436          29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEI-IVTAGAKEALFLAFL  107 (393)
T ss_pred             CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEE-EECCCHHHHHHHHHH
T ss_conf             6797568899999869999999999865677778876779999999999887539988976628-982667999999999


Q ss_pred             HCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CC-CCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--
Q ss_conf             205789707997073688888765323876306740-57-776578676785-----565799742024202203203--
Q gi|254780153|r   86 SLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-AP-YGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--  156 (391)
Q Consensus        86 nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~-~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--  156 (391)
                      .++++||.+++..=+|-.. ...+...++..+.+.. .. .+..++.++++.     .+.+.+..=..-||...+...  
T Consensus       108 al~~pGDeVlip~P~Y~~y-~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~PnNPTGav~~~~~l~  186 (393)
T COG0436         108 ALLNPGDEVLIPDPGYPSY-EAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELK  186 (393)
T ss_pred             HHCCCCCEEEECCCCCCCH-HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHH
T ss_conf             9718998899838998255-999987799798721666655874799999864774645999979999667788999999


Q ss_pred             ---EECCCCCCEEEEEECCH-HH--H-CC---CCC---CCCEEEEECCHHCCCCCCC--CEEEEEC-HHHHHHHHHCCCC
Q ss_conf             ---50256861488640110-11--0-25---455---6857999700120017665--1544567-7888765411445
Q gi|254780153|r  157 ---FIPESREGLVICDATSA-VF--A-RH---IDF---NKLDVVTFSAQKVLGGEAG--FGIIILS-PASVERLEKYVPS  220 (391)
Q Consensus       157 ---~~~~~~~~llivD~vSs-~g--~-~p---~d~---~~iDv~~a~sQK~l~~ppG--l~~v~~s-~~al~~~~~~~~~  220 (391)
                         .++.+++..+|.|-+=+ +.  + .+   +..   ...-+.+-|.-|.++ -+|  +|.++.. +...+.....   
T Consensus       187 ~i~~~a~~~~i~ii~DE~Y~~l~yd~~~~~s~~~~~~~~~~~I~i~s~SK~~~-mtG~RiG~~v~~~~~l~~~~~~l---  262 (393)
T COG0436         187 AIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYG-MTGWRIGWVVGPPEELIAALRKL---  262 (393)
T ss_pred             HHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCC-CCCCCEEEEEECHHHHHHHHHHH---
T ss_conf             99999998792999963644362689877775442787641899945633578-83612189972769999999999---


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE  300 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~  300 (391)
                                          +..+...+|+..=++...+|+--...+-++.+.+.++++++.+++.+.+.+++.... .+
T Consensus       263 --------------------~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~-~p  321 (393)
T COG0436         263 --------------------KSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVK-PP  321 (393)
T ss_pred             --------------------HHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC-CC
T ss_conf             --------------------987236877899999999956766305899999999999999999997558866513-88


Q ss_pred             CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCC-EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             00365317898247310113734567888999998886282872665--567675-056861588899999999999999
Q gi|254780153|r  301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                      +.  ..-+-..++..       .....+.   ..+|.+.|+++--|.  +...|. .+|++.....  ++++..++.|+.
T Consensus       322 ~G--a~y~~~~i~~~-------~d~~~f~---~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~--~~l~~a~~rl~~  387 (393)
T COG0436         322 EG--AFYLFPKIPEL-------LDSEEFA---KKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSE--ETLEEALRRLAR  387 (393)
T ss_pred             CC--CEEEEEECCCC-------CCHHHHH---HHHHHHCCEEEECHHHHCCCCCCCEEEEEEECCH--HHHHHHHHHHHH
T ss_conf             86--45997657998-------9989999---9999867999957257497877987999973689--999999999999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780153|r  378 VFY  380 (391)
Q Consensus       378 ~~~  380 (391)
                      ...
T Consensus       388 ~~~  390 (393)
T COG0436         388 FLA  390 (393)
T ss_pred             HHH
T ss_conf             986


No 210
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=99.03  E-value=4.9e-07  Score=64.14  Aligned_cols=299  Identities=15%  Similarity=0.055  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC-CC
Q ss_conf             99999999999999688998579997487348999875320-57897079970736888887653238763067405-77
Q gi|254780153|r   47 KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA-PY  124 (391)
Q Consensus        47 ~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~-~~  124 (391)
                      -+..++-.+.++++++.+.   ++ ...|||.|.+.++.-+ +++|+.+++-.-.|..-. .-+...| ..+...+. +.
T Consensus        24 G~~v~~fE~~~~~~~g~k~---~v-~~~sgT~Al~lal~a~~~~~gdeVi~p~~t~~at~-~ai~~~G-~~pvf~Dvd~~   97 (363)
T pfam01041        24 GPEVREFEKEFAAYLGVKH---AV-AVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA-NAVLYLG-AKPVFVDIDPD   97 (363)
T ss_pred             CHHHHHHHHHHHHHHCCCE---EE-EECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH-HHHHHCC-CEEEEEECCCC
T ss_conf             9899999999999978495---99-97588999999999859889299997997759889-9999869-97998506456


Q ss_pred             CCCCCHHHCC-----CCCCEEEEEEECCCCEEECC--EEEECCCCCCEEEEEECCHHHHCCCC-----CCCCEEEEECCH
Q ss_conf             7657867678-----55657997420242022032--03502568614886401101102545-----568579997001
Q gi|254780153|r  125 GSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPD--VGFIPESREGLVICDATSAVFARHID-----FNKLDVVTFSAQ  192 (391)
Q Consensus       125 g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~--~~~~~~~~~~llivD~vSs~g~~p~d-----~~~iDv~~a~sQ  192 (391)
                      ....++++++     ..+++..||.   -|...+.  ...+|+.++..+|-||..++|+.-=.     +..+.+.-+.+.
T Consensus        98 t~~id~~~l~~~i~~~tkaIi~vh~---~G~~~d~~~i~~~~~~~~i~lIEDaA~a~Ga~~~gk~~G~~gd~~~fSF~~~  174 (363)
T pfam01041        98 TYNIDPAAIEAAITPRTKAIMPVHL---YGQPADMDAIRAIAAEHGLPVIEDAAHAHGATYKGKRVGTFGDAATFSFFPT  174 (363)
T ss_pred             CCCCCHHHHHHHCCCCCCEEEEECC---CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCCCEEECCCC
T ss_conf             5685899999860758709998789---8986899999999998499999731320267658654356445210205787


Q ss_pred             HCCCCCCCCEEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             2001766515445677-888765411445778312320011232103347864466644889999999986201031899
Q gi|254780153|r  193 KVLGGEAGFGIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSA  271 (391)
Q Consensus       193 K~l~~ppGl~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~  271 (391)
                      |.|..--| |+++.+. +..+++......+......     .+++....-|.-..-..+.+.. ...+|+.      ++.
T Consensus       175 K~ittGeG-G~i~tnd~~l~~~~r~lr~~G~~~~~~-----~~~~~~~~~G~N~rmseiqAai-gl~qL~~------l~~  241 (363)
T pfam01041       175 KNITTGEG-GAVVTDDPELAERARCLRNHGCGRPAN-----KRYRHEVPLGYNYRMTELQAAI-GLAQLER------LDE  241 (363)
T ss_pred             CCCCCCCC-EEEEECCHHHHHHHHHHHHCCCCCCCC-----CCEEEEECCCCCCCCCHHHHHH-HHHHHHH------HHH
T ss_conf             65446897-099969999999999999659688987-----7522450677556767889999-9999999------999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--
Q ss_conf             99999977999999987479716766882003--65317898247310113734567888999998886282872665--
Q gi|254780153|r  272 CVERCNANAAVLFQFIQENDWIENLAVDETTR--SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--  347 (391)
Q Consensus       272 ~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r--S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--  347 (391)
                      +.++.++.++.+.+.+...+.+......+...  +.-..++.+++...         .....+...|.++|+......  
T Consensus       242 ~~~~R~~i~~~Y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~---------~~R~~l~~~L~~~gI~t~~~y~~  312 (363)
T pfam01041       242 FIARRREIAERYQELLAELPGFEPLTLPTEEDDHAWHLFPVLVPEEAA---------GSRDELVEALKEAGIGTRVHYPI  312 (363)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCCH---------HHHHHHHHHHHHCCCCEEEECCC
T ss_conf             999999999999998578999410686888875147999999764342---------33999999999879955865897


Q ss_pred             --CC-------------CC-------CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             --56-------------76-------7505686158889999999999999
Q gi|254780153|r  348 --YR-------------DA-------PLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       348 --~r-------------~~-------~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                        |+             ..       .+++.+-++..++.+|++..++.|.
T Consensus       313 pl~~~~~~~~~~~~~~~~~pna~~l~~~~l~LP~~~~Lt~~di~~I~~~IK  363 (363)
T pfam01041       313 PLHLQPYYEDRVYYAPGDLPNAERLASRVLSLPLYPGLTDEEVDRVAEAVR  363 (363)
T ss_pred             CHHHCHHHHHCCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             134297877456888889989999985989897999889999999998639


No 211
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.03  E-value=1.8e-06  Score=60.49  Aligned_cols=278  Identities=15%  Similarity=0.159  Sum_probs=160.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCCEEE
Q ss_conf             289889999999999999996889985799974873489998753205789-7079970736888887653238763067
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGWMSDIRQLSLQDVRE  119 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~  119 (391)
                      ||=|+-.  ..+.++.|.+.++++.+ .|++ ..|++..++.++..++++| +.+++..-.|+..  ..+++..+..+..
T Consensus        52 nrYPD~~--~~~Lr~alA~~~gv~~e-~I~v-GnGSdElI~~l~raf~~pg~d~vl~~~PtF~~Y--~~~a~~~g~~~~~  125 (355)
T PRK01688         52 NRYPECQ--PKAVIENYAQYAGVKPE-QVLV-SRGADEGIELLIRAFCEPGKDAILYCPPTYGMY--SVSAETIGVECRT  125 (355)
T ss_pred             CCCCCCC--HHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHCCCEEEE
T ss_conf             2497998--89999999998685877-8998-168999999999998558997499778876899--9999867957999


Q ss_pred             EECCCCCCCCHHH----CCCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECC-HHHHCC--CC-CCCC-EE
Q ss_conf             4057776578676----7855657997420242022032035---025-686148864011-011025--45-5685-79
Q gi|254780153|r  120 FTAPYGSLPDFSK----VDFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATS-AVFARH--ID-FNKL-DV  186 (391)
Q Consensus       120 ~~~~~g~~~~~~~----~~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vS-s~g~~p--~d-~~~i-Dv  186 (391)
                      +........+++.    ++..+.+.+|.=..-||...+..++   +.. ..+.++|+|=.= .|....  ++ ..+. .+
T Consensus       126 vpl~~~f~~d~~~~~~~~~~~klvficNPNNPTG~~~~~~~l~~l~~~~~~~~lvVvDEAY~eF~~~~s~~~l~~~~~Nl  205 (355)
T PRK01688        126 VPTLENWQLDLPAISDNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHL  205 (355)
T ss_pred             ECCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHCCCCHHHHHHHHCCCEE
T ss_conf             52765768699999975158888998689998776468999999997588886688554164347640045676407728


Q ss_pred             -EEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             -997001200176651--54456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r  187 -VTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL  263 (391)
Q Consensus       187 -~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i  263 (391)
                       +.=+--|.+| -||+  |.++.+++.++...+...++                         .-+.....+...+|.  
T Consensus       206 iVlRTfSK~~g-LAGlRlGy~ia~~~ii~~l~k~~~p~-------------------------~vn~~~~~~a~~al~--  257 (355)
T PRK01688        206 VILRTLSKAFA-LAGLRCGFTLANEEVINLLLKVIAPY-------------------------PLSTPVADIAAQALS--  257 (355)
T ss_pred             EEEEEHHHHHC-CCCCCEEEEECCHHHHHHHHHHHCCC-------------------------CCCHHHHHHHHHHHH--
T ss_conf             99951668752-68731278850999999999850789-------------------------753999999999972--


Q ss_pred             HCCCCHHHH---HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             010318999---999997799999998747971676688200365317898-2473101137345678889999988862
Q gi|254780153|r  264 KKMGGLSAC---VERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQKSFCKSMLSFLEKE  339 (391)
Q Consensus       264 ~~~gGl~~~---~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~  339 (391)
                       .+ +++.+   .+...+..+.+++.+.+.++++..     +-|.+|-.+. +.+              ...+.+.|.++
T Consensus       258 -~~-~~~~~~~~~~~i~~~R~~l~~~L~~l~~~~~v-----~pS~aNFil~~~~~--------------~~~~~~~L~~~  316 (355)
T PRK01688        258 -PQ-GIAAMRERVAQINANRQWLIAALKEIPCVEQV-----FDSETNYILARFTA--------------SSAVFKSLWDQ  316 (355)
T ss_pred             -CC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-----CCCCCCEEEEECCC--------------HHHHHHHHHHC
T ss_conf             -04-59999999999999999999999858998616-----89988789997799--------------99999999979


Q ss_pred             CEEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             828726-6556767505686158889999999999999
Q gi|254780153|r  340 EIAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       340 g~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      |+++.- ..+......+||+.+   +.++.++|+++|.
T Consensus       317 GIlVR~~~~~~gl~~~lRItig---t~een~~ll~aLk  351 (355)
T PRK01688        317 GIILRDQNKQPGLSNCLRITIG---TREECQRVIDALR  351 (355)
T ss_pred             CEEEEECCCCCCCCCEEEEECC---CHHHHHHHHHHHC
T ss_conf             9099558987899998999769---9999999999973


No 212
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240   This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=99.03  E-value=1.4e-07  Score=67.50  Aligned_cols=329  Identities=16%  Similarity=0.146  Sum_probs=216.2

Q ss_pred             CCCHHHHHHHHHHHCC---------CCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---
Q ss_conf             6896899998632103---------65328-9889999999999999996889985799974873489998753205---
Q gi|254780153|r   22 AKRPGWSLGILEGALL---------GRSHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---   88 (391)
Q Consensus        22 ~~~p~~v~~~~~~~~l---------~~sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---   88 (391)
                      ++.+. |.++|..-+.         ++||. +-+..+.++.++..+.++.+. |..+++| ++|+|..-..++....   
T Consensus        14 P~~~~-v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~-d~~ei~f-tsGate~~nl~i~G~a~fy   90 (404)
T TIGR02006        14 PVDKR-VAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGA-DSREIVF-TSGATESDNLAIKGVAKFY   90 (404)
T ss_pred             CHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCCEEEE-ECCCCCCHHHHHHHHHHHH
T ss_conf             64589-9999999887415668864234334530688999999999998458-8740787-2377530247888899997


Q ss_pred             CCCCEEEEEECCHHHHH----HHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----CCEEEEEEECCCCEEECCEEE--
Q ss_conf             78970799707368888----8765323876306740577765786767855-----657997420242022032035--
Q gi|254780153|r   89 GYRGVDVLAWESFGLGW----MSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----RDVVFVWNGTTSGVCVPDVGF--  157 (391)
Q Consensus        89 ~~~~~~~~~~g~~~~r~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~v~~~h~ETstGv~~~~~~~--  157 (391)
                      ..+..+++.. .--.+.    ...+.+. +..++.+.....-..+++.++.+     -.|.+.+...-.|+..++..+  
T Consensus        91 ~~k~~h~it~-~~ehk~vl~~~r~le~~-G~~vtyl~~~~~G~~~~~~l~~~~~~~t~lvs~m~vnne~G~~~~~~~i~~  168 (404)
T TIGR02006        91 KSKGKHIITS-KTEHKAVLDTCRELERE-GFEVTYLEVKEDGLIDLEELKAAIRDDTILVSVMAVNNEIGVIQDIAAIGE  168 (404)
T ss_pred             HCCCCEEEEE-EHHHHHHHHHHHHHHHC-CCEEEEEECCCCCCEEHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHH
T ss_conf             4237667864-00367899999988757-816898501456621089999874127057875531144330465889998


Q ss_pred             ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             02568614886401101102545568--5799970012001766515445677888765411445778312320011232
Q gi|254780153|r  158 IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       158 ~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      +|..+..++-+|+.+++|-.++|..+  +|.+-.+++|-. ||-|++.++++++-.-|.......               
T Consensus       169 ~~r~~~~~fh~d~~q~~Gk~~~~~~~~~~dl~s~s~hk~y-GPkGiGalyv~~~Prvr~~~~~~G---------------  232 (404)
T TIGR02006       169 LCRERKVLFHVDAAQSVGKIPIDVEELKVDLMSISGHKIY-GPKGIGALYVRRKPRVRLEALIHG---------------  232 (404)
T ss_pred             HHHHCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCC-CCCCCCEEEEECCCCEEEEEECCC---------------
T ss_conf             7630441476400013451134353431012100123102-675521245512773355200048---------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCEEEEEECC
Q ss_conf             1033478644666448899999999862010318999999997799999998747971-676688200365317898247
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWI-ENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~-~~~~~~~~~rS~~~v~~~~~d  314 (391)
                       -..++|---.|-|++.|.++.++.+...++  +..-..+.....+.++..++...-. .+-..+.......++.|...+
T Consensus       233 -GG~erG~r~Gtl~~~~ivG~G~~~~~a~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~~~~~~ln~sf~~ve  309 (404)
T TIGR02006       233 -GGHERGMRSGTLPTHQIVGLGEAFRIAKEE--LAKDTARVLKLRDRLLNGIESIEEVYLNGDLEQRVKGNLNVSFNYVE  309 (404)
T ss_pred             -CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEC
T ss_conf             -874354102443201432101678999999--98889999999999999874456533121144311222101222002


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCEEE---CCCC-C--CCC-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             31011373456788899999888628287---2665-5--676-------750568615888999999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLSFLEKEEIAY---DIGS-Y--RDA-------PLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~---~~~~-~--r~~-------~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      ......       .++++.   -..|-+.   .+.+ |  |..       -.++|++.+-..+.++|+..++.+.....+
T Consensus       310 Gesl~~-------a~~~~a---vssGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt~~e~~~~~~~v~~~~~~  379 (404)
T TIGR02006       310 GESLIM-------ALKDLA---VSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTTEEEIDYAVKLVKSAVDK  379 (404)
T ss_pred             HHHHHH-------HHHHHH---HCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             047888-------888875---3056410013353557887606420122322210011121078999999999999998


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780153|r  382 QKI  384 (391)
Q Consensus       382 ~k~  384 (391)
                      ++.
T Consensus       380 lr~  382 (404)
T TIGR02006       380 LRE  382 (404)
T ss_pred             HHH
T ss_conf             861


No 213
>PRK05939 hypothetical protein; Provisional
Probab=99.03  E-value=9.1e-08  Score=68.76  Aligned_cols=298  Identities=16%  Similarity=0.082  Sum_probs=158.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+-+..    -.++.+||-+|+.+++++++++|+.+++....||.-  ..+.+.+++ +.++.+
T Consensus        44 ~nPT~~~le~~l---a~LEgg~----~a~~~sSGMaAi~~~l~~ll~~Gd~il~~~~~YG~t~~l~~~l~~~G-I~v~~v  115 (396)
T PRK05939         44 GTPTTAALEAKI---TEMEGGV----GTVCFATGMAAIAAVFLTLLRAGDHLVSSQYLFGNTNSLLGTLQGLG-VEVTMV  115 (396)
T ss_pred             CCHHHHHHHHHH---HHHHCCC----EEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC-EEEEEE
T ss_conf             986799999999---9982997----49996579999999999835889889953886922999999865318-699998


Q ss_pred             ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEE---ECCEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf             057776578676785--5657997420242022---03203--502568614886401--10110254556857999700
Q gi|254780153|r  121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVC---VPDVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA  191 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~---~~~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s  191 (391)
                      +..     +.++++.  .+...+++.||.+--.   .++..  .+++++++++|||-+  +-+...|++ .++|+++-|.
T Consensus       116 d~~-----d~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~Pl~-~GaDivvhS~  189 (396)
T PRK05939        116 DAT-----DVQQVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLVYVVDNTMTSPWLFRPKS-VGASLVINSL  189 (396)
T ss_pred             CCC-----CHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHH-HCCCEEEEEC
T ss_conf             897-----9899998618566189998089998707589999999998399799977763042058556-3898899834


Q ss_pred             HHCCCCCCCCEEEEECHH---HHHHHHHCCCCCCCCCHHHCCHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             120017665154456778---88765411445778312320011232103--3478644666448899999999862010
Q gi|254780153|r  192 QKVLGGEAGFGIIILSPA---SVERLEKYVPSWPLPKIFRMVKGGRVMEG--LFCGETINTPSLLCIEDYIDALLWLKKM  266 (391)
Q Consensus       192 QK~l~~ppGl~~v~~s~~---al~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~TP~v~~i~al~~~l~~i~~~  266 (391)
                      -|-++|-.-+-.-++...   -|.+...............+ ...+....  ..-|.   +++-+.-|.+...|      
T Consensus       190 TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~r~lG~---~l~p~~a~l~~rGL------  259 (396)
T PRK05939        190 SKYIAGHGNALGGAVTDTGLFDWSGYPNIFPAYRKGDPQQW-GLTQIRKKGLRDMGA---TLSSEAAHRIAIGA------  259 (396)
T ss_pred             CCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHCCCCHHHH-HHHHHHHHHHHHCCC---CCCHHHHHHHHCCC------
T ss_conf             33025887747699965763203323113245415528776-689999888885278---78989999998266------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             318999999997799999998747971676688200--------------365317898247310113734567888999
Q gi|254780153|r  267 GGLSACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSM  332 (391)
Q Consensus       267 gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~  332 (391)
                      ..+.-|.+|+.+++..+-+|+++++.... |..|.-              .....++|.+++...       .    ..+
T Consensus       260 ~TL~lRm~~~~~nA~~lA~~L~~hp~V~~-V~yPgL~s~p~~~~a~~~~~g~gg~~sf~l~~~~~-------~----~~f  327 (396)
T PRK05939        260 ETLALRMDRSCSNALALATFLEGHPAVAR-VYYPGLASHPQHARATELFGAYGGLLSFELADGID-------C----FDF  327 (396)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCCE-EECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHH-------H----HHH
T ss_conf             61889999999889999999863999578-98999999944999998664886379999668899-------9----999


Q ss_pred             HHHHHHCCEEECCCCCCCC----------------------CCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             9988862828726655676----------------------750-56861588899999999999999999
Q gi|254780153|r  333 LSFLEKEEIAYDIGSYRDA----------------------PLG-LRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       333 ~~~l~~~g~~~~~~~~r~~----------------------~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      ...|.--..++.+|+.++.                      ..+ +|++++=    ||++.|++-|+.|+.
T Consensus       328 ~~~l~l~~~a~SlGg~eSLi~~p~~t~h~~~~~e~r~~~Gi~~~liRlSvGl----Ed~~DLi~DL~qAL~  394 (396)
T PRK05939        328 LNRLKLVIKATHLGDTRTLAIPVAHTIYYEMGAERRASMGIADSLIRVSVGI----EDTADLIADFEQALD  394 (396)
T ss_pred             HHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHH
T ss_conf             9808724675265763321158621145238999998669791969999410----999999999999984


No 214
>PRK07323 consensus
Probab=99.03  E-value=1.1e-06  Score=62.00  Aligned_cols=313  Identities=16%  Similarity=0.128  Sum_probs=163.0

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEE
Q ss_conf             968999986321036532898-89-9999999999999968899-85799974873489998753205--7897079970
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPE-NYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAW   98 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~-~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~   98 (391)
                      +|+ |.+++.+++-...|-+. .| .+...+.-++|.+.+..|. .++|+| ..||+.|.|+++.=.-  ..+..++...
T Consensus        76 ~p~-i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~rv~f-~~SGsEAvE~AiklAr~~tgr~~iis~~  153 (443)
T PRK07323         76 HPH-VVRAVQEQAERFAHVCGTDFYYEPTTSLAERLVGHAPFPGEKWRVFF-GNSGAESVEAAIKLARYHTGRSHIIAFL  153 (443)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE-ECCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             899-99999999975556554655778999999999984789766568998-3774689999999999846998799970


Q ss_pred             CCHHHHHHHHHHHCCC------------CCEEEEECCC------CCCCC------HHHCC-------CCCCEEEEEEECC
Q ss_conf             7368888876532387------------6306740577------76578------67678-------5565799742024
Q gi|254780153|r   99 ESFGLGWMSDIRQLSL------------QDVREFTAPY------GSLPD------FSKVD-------FDRDVVFVWNGTT  147 (391)
Q Consensus        99 g~~~~r~~~~~~~~~~------------~~~~~~~~~~------g~~~~------~~~~~-------~~~~v~~~h~ETs  147 (391)
                      ++|-++......-.+.            ..+..+..+.      +....      ++.++       ....++.+-.|..
T Consensus       154 ~~yHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~iAAvi~EPi  233 (443)
T PRK07323        154 GAFHGRTYGAMSLTGSKTVYRQGFGPLLPGVSHIPYPNPFRPPLGSTPEECGHAVLDHLESLFQTVLPAEEVAAIVVEPI  233 (443)
T ss_pred             CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf             78789876424312883000135688899906706876323434687267899999999999985178997899998687


Q ss_pred             CC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---CCC--CCC--EEEEECCHHCCCCCCC--CEEEEECHH
Q ss_conf             20---22032------035025686148864011011025---455--685--7999700120017665--154456778
Q gi|254780153|r  148 SG---VCVPD------VGFIPESREGLVICDATSAVFARH---IDF--NKL--DVVTFSAQKVLGGEAG--FGIIILSPA  209 (391)
Q Consensus       148 tG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~d~--~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~  209 (391)
                      .|   +..|.      ...+|+++++++|+|=|.+=.++-   +-+  .++  |++  ...|+|++  |  ++.++.+++
T Consensus       234 qg~gG~~~pp~~yl~~lr~lc~~~~illI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gKglg~--G~Plsav~~~~~  309 (443)
T PRK07323        234 QGEGGYIVPPDGFLPRLRAICDRHGILLVVDEVQAGMGRTGRLFAIEHWGVQPDII--TLAKGIAS--GMPLGAILAREE  309 (443)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEE--EECHHHCC--CCCEEEEEECHH
T ss_conf             78889856998999999999998497588674232788666430201469788889--87134328--873189998578


Q ss_pred             HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r  210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE  289 (391)
Q Consensus       210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~  289 (391)
                      ..+                +.       ....++|+.--|+ ...+..++|+.++ +    +..++.+++.+.+.+.+++
T Consensus       310 i~~----------------~~-------~g~h~~T~~gnpl-~~aaa~a~L~iie-~----~l~~~v~~~g~~l~~~L~~  360 (443)
T PRK07323        310 LMT----------------WP-------PGSHGTTFGGNPV-AAAAAHATLDLLE-G----GLMENAARMGEFLLAELRQ  360 (443)
T ss_pred             HHC----------------CC-------CCCCCCCCCCCHH-HHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHH
T ss_conf             613----------------65-------6776536589748-9999999999998-7----7999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf             79716766882003653178-98247310113734567888999998886282872665567675056861588899999
Q gi|254780153|r  290 NDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL  368 (391)
Q Consensus       290 ~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv  368 (391)
                      +..-.+.+.+  .|...... +.+.++... .+    ......+...+.++|+++...|    +..+|+.--=.++.+++
T Consensus       361 l~~~~p~v~~--vRG~GL~~giel~~~~~~-~~----~~~~~~i~~~~~~~Gll~~~~g----~~~ir~~PPL~is~~ei  429 (443)
T PRK07323        361 LQDRFPFLGD--VRGRGLMIGLDFVDPDGN-PD----GDLRDRAVRLAFEKGLLLLGCG----KAAIRICPPLVLTREEA  429 (443)
T ss_pred             HHHHCCCEEE--EECCCEEEEEEEECCCCC-CC----HHHHHHHHHHHHHCCEEEEECC----CCEEEEECCEECCHHHH
T ss_conf             8860997998--731563999999548888-48----8999999999997997998369----99899978910889999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999999
Q gi|254780153|r  369 LLLCDWLRWVFYFQ  382 (391)
Q Consensus       369 ~~L~~aLe~~~~~~  382 (391)
                      +.+++.|+.+++++
T Consensus       430 d~~l~~l~~al~el  443 (443)
T PRK07323        430 ATGLDILREVFREL  443 (443)
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             99999999999849


No 215
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.02  E-value=1.4e-06  Score=61.22  Aligned_cols=212  Identities=13%  Similarity=0.038  Sum_probs=123.1

Q ss_pred             CCEEEEEEECCCC---EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCC-CCCCC
Q ss_conf             6579974202420---22032------0350256861488640110-110--254--55685799970012001-76651
Q gi|254780153|r  137 RDVVFVWNGTTSG---VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLG-GEAGF  201 (391)
Q Consensus       137 ~~v~~~h~ETstG---v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~-~ppGl  201 (391)
                      ..++.+-.|...|   +..+.      ...+|+++++++|+|=|.+ +|-  ..+  +..++.=.+...-|+|+ |--=+
T Consensus       217 ~~iAaviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEVqtG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl  296 (445)
T PRK09221        217 SNIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDLITFAKGLTNGAIPM  296 (445)
T ss_pred             CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCE
T ss_conf             76689997775577871418889999999998755848998415317881357612405767998677634356787754


Q ss_pred             EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             54456778887654114457783123200112321033478644666448899999999862010318999999997799
Q gi|254780153|r  202 GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAA  281 (391)
Q Consensus       202 ~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~  281 (391)
                      +.++.+++..+....-...  ..   .          ...++|+.--| ....+...+|+.+++++    ..+|.+++.+
T Consensus       297 sav~~~~ei~d~~~~~~~~--~~---~----------~~hg~T~~gnp-la~aaa~a~L~~i~~~~----l~~~~~~~g~  356 (445)
T PRK09221        297 GAVIASDEIYDAFMQGPEY--AI---E----------FFHGYTYSGHP-VACAAGLATLDIYREED----LFERAAELAP  356 (445)
T ss_pred             EEEEECHHHHHHHHCCCCC--CC---C----------CCCCCCCCCCH-HHHHHHHHHHHHHHHCC----HHHHHHHHHH
T ss_conf             8999657899976038755--53---2----------33466788898-99999999999998646----9999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECC
Q ss_conf             9999987479716766882003653178-982473101137345678889999988862828726655676750568615
Q gi|254780153|r  282 VLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVG  360 (391)
Q Consensus       282 ~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~  360 (391)
                      .+.+.++.+.. .+.+.  +.|...... +.+.+.     +. ........+...+.++|+++..+     |+.+|+.--
T Consensus       357 ~l~~~L~~L~~-~~~v~--dVRG~Glm~giel~~~-----~~-~~~~~~~~~~~~~~~~Gll~~~~-----g~~lrl~PP  422 (445)
T PRK09221        357 YFEDAVHSLKG-LPHVI--DIRNYGLVAGIELAPR-----PG-APGKRGYEAFMKCFEKGLLVRYT-----GDTIALSPP  422 (445)
T ss_pred             HHHHHHHHHHC-CCCEE--EEECCCEEEEEEEECC-----CC-CHHHHHHHHHHHHHHCCEEEEEC-----CCEEEEECC
T ss_conf             99999998626-99759--8750408999998578-----88-55578999999999699289637-----997999899


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             8889999999999999999999
Q gi|254780153|r  361 VTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       361 g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      =.++.++|+.+++.|+.++.++
T Consensus       423 L~it~~eid~~~~~l~~al~~v  444 (445)
T PRK09221        423 LIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH
T ss_conf             3489999999999999999986


No 216
>PRK08363 alanine aminotransferase; Validated
Probab=99.01  E-value=2.8e-06  Score=59.31  Aligned_cols=328  Identities=16%  Similarity=0.126  Sum_probs=172.3

Q ss_pred             CCCCCC-CCC---CCHHHHHHHHHHHCCCCC-CCCH--HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHH
Q ss_conf             886888-776---896899998632103653-2898--8999999999999999688998-5799974873489998753
Q gi|254780153|r   14 PFFSSG-PCA---KRPGWSLGILEGALLGRS-HRCV--LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALW   85 (391)
Q Consensus        14 ~~F~pG-P~~---~~p~~v~~~~~~~~l~~s-HRs~--~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~   85 (391)
                      .+|+-| |+.   -+|+.+.+++...+-+-. |-++  =..++-+.+-+.+++-+++.=+ -+|++ +.|++.++..++.
T Consensus        33 i~l~iG~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~pd~I~v-t~G~~~al~~~~~  111 (398)
T PRK08363         33 IRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV-TNAVTEALQMLFG  111 (398)
T ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEE-CCCHHHHHHHHHH
T ss_conf             685698999789998999999999999718998899887599999999999998689986688898-5778999999999


Q ss_pred             HCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf             20578970799707368888876532387630674-057776578676785-----565799742024202203203---
Q gi|254780153|r   86 SLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG---  156 (391)
Q Consensus        86 nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~---  156 (391)
                      .|+.+||.+++-+=+|..- ...+...++..+... ....+..+++++++.     .+.+.++.=..-||...+...   
T Consensus       112 ~l~~pGD~Vlvp~P~Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~i~~~tk~i~l~nP~NPTG~v~s~~~l~~  190 (398)
T PRK08363        112 ALLDPGDEILIPGPSYPPY-TGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYDKKTLKE  190 (398)
T ss_pred             HHCCCCCEEEECCCCCCCH-HHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             9669989899866756743-899998399784368862148968999999753113729998799998888654889999


Q ss_pred             --EECCCCCCEEEEEECCHHHH---CCCC---CCC-CE-EEEECCHHCCCCCCC--CEEEE-ECH-HHHHHHHHCCCCCC
Q ss_conf             --50256861488640110110---2545---568-57-999700120017665--15445-677-88876541144577
Q gi|254780153|r  157 --FIPESREGLVICDATSAVFA---RHID---FNK-LD-VVTFSAQKVLGGEAG--FGIII-LSP-ASVERLEKYVPSWP  222 (391)
Q Consensus       157 --~~~~~~~~llivD~vSs~g~---~p~d---~~~-iD-v~~a~sQK~l~~ppG--l~~v~-~s~-~al~~~~~~~~~~~  222 (391)
                        .+|..++.++|.|-+=+-..   .+..   ..+ .. +++.|.-|.++ -||  +|.++ ..+ ..+.+....     
T Consensus       191 i~~la~~~~~~vIsDEiY~~l~~~~~~~s~~~~~~~~~vi~i~s~SK~~~-~~G~RiG~i~~~~p~~~~~~~~~~-----  264 (398)
T PRK08363        191 ILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYF-ATGWRLGYIYFVDPEGKLDEVREA-----  264 (398)
T ss_pred             HHHHHHHCCCEEECHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCC-CCCCCEEEEEEECCHHHHHHHHHH-----
T ss_conf             99998755964761334666416998779778286778899825503047-856136999975838999999999-----


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                            +..+         .++...+++..-++...+++.-.  .-++.+.++.+++.+.+++.+...+++....++-. 
T Consensus       265 ------~~~~---------~~~~~~~~~~~Q~a~~~al~~~~--~~~~~~~~~~~~rrd~~~~~L~~~~g~~~~~P~G~-  326 (398)
T PRK08363        265 ------LDKL---------ARIRLCPNTPAQFAAIAGLTGPM--DYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGA-  326 (398)
T ss_pred             ------HHHH---------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE-
T ss_conf             ------9998---------55064777399999999986687--78999999999999999999971799575588878-


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             365317898247310113734567888999998886282872665-5676750-56861588899999999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                         .-+-..+++...  .+   ...+   ...++.+.|+++--|. +...+.+ ||++..  .+.+.++.-++-|+..++
T Consensus       327 ---~y~~~~l~~~~~--~~---~~ef---~~~ll~e~gV~v~PG~~Fg~~g~g~vRlsf~--~~~e~l~eal~Rl~~~l~  393 (398)
T PRK08363        327 ---FYIFPRIEEGPW--KD---DKEF---VLDLLHEAHVLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMR  393 (398)
T ss_pred             ---EEEEEECCCCCC--CC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf             ---898378788899--99---9999---9999985999998964328899986999983--899999999999999999


No 217
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase; InterPro: IPR013375   The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases .    Many archaeal species lack cysteinyl-tRNA synthetase, an essential enzyme that provides Cys-tRNA(Cys) in other organisms. Instead, in a two step pathway, tRNA-Cys is acylated with O-phosphoserine (Sep) to form Sep-tRNA(Cys), which is subsequently converted to Cys-tRNA(Cys) . This pathway is also thought to function as the sole route of cysteine biosynthesis in these organisms. Several other archaeal species use both this pathway and direct tRNA(Cys) aminoacylation to synthesize Cys-tRNA(Cys), but this pathway appears to be the only route for cysteine biosynthesis. Proteins in this entry catalyse the second step in this pathway using pyridoxal phosphate and a sulphur donor to synthesize Cys from Sep while attached to the tRNA..
Probab=99.01  E-value=1.7e-08  Score=73.46  Aligned_cols=308  Identities=12%  Similarity=0.067  Sum_probs=199.4

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             88999999999999999688998579997487348999875320578970799707368888876532387630674057
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAP  123 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~  123 (391)
                      |+..+-+++   .|.+|++. |   ++=.+-||..+=+|++-.|.++||.+++.........  -++++.+.+|..+-..
T Consensus        51 PpI~~F~~d---aLA~FlG~-D---~~R~t~GARe~KfaVMhalC~~GD~vV~D~~AHYtsy--vAAEragl~v~eVPy~  121 (381)
T TIGR02539        51 PPIKDFLED---ALAEFLGM-D---VVRVTHGAREGKFAVMHALCKEGDVVVLDGLAHYTSY--VAAERAGLNVKEVPYE  121 (381)
T ss_pred             CCHHHHHHH---HHHHHHCC-C---EEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHH--HHHHHCCCEEEECCCC
T ss_conf             831000455---42667279-7---4540677502457887640899898998587454458--9997549727881655


Q ss_pred             CCC---CCC-------HHHCCC-----CCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--C
Q ss_conf             776---578-------676785-----5657997420242022032035--02568614886401101102545568--5
Q gi|254780153|r  124 YGS---LPD-------FSKVDF-----DRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFNK--L  184 (391)
Q Consensus       124 ~g~---~~~-------~~~~~~-----~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--i  184 (391)
                      .|.   -.+       ++++..     ...+.+||.+.+.|-+.|...+  +|+..+++++.-|.=++|-+|++...  .
T Consensus       122 ~g~P~Y~v~~e~Y~~viee~~d~~G~~~~LallThvDG~YGNL~DA~kva~vc~~~gvPlLLNCAY~vGRmPv~~ke~~~  201 (381)
T TIGR02539       122 TGHPEYKVDPEGYKEVIEEVEDESGKPVALALLTHVDGEYGNLADAKKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIKA  201 (381)
T ss_pred             CCCCEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCC
T ss_conf             88860764166788888655202798834899840268867511245687665420786221245052100315777787


Q ss_pred             EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCC-CCCCCCCHHHCCHHHHHHCCCCCCCCC-CCCCHHHHHHHHHHHHH
Q ss_conf             7999700120017665154456778887654114-457783123200112321033478644-66644889999999986
Q gi|254780153|r  185 DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYV-PSWPLPKIFRMVKGGRVMEGLFCGETI-NTPSLLCIEDYIDALLW  262 (391)
Q Consensus       185 Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~TP~v~~i~al~~~l~~  262 (391)
                      |.+++|.+|.|+.-+=+|++.+|++.-+..-+.. -.+...  =..... |..+  .-|-|- .-|=+.++.-+=.+.+.
T Consensus       202 DFiVGSGHKSMAASaP~GvLa~~eE~~~~v~r~SslrGdvs--G~~~~~-KEvE--lLGCT~rGap~~TlmASfP~VveR  276 (381)
T TIGR02539       202 DFIVGSGHKSMAASAPCGVLAMSEEWEDKVLRKSSLRGDVS--GRKFPV-KEVE--LLGCTSRGAPIVTLMASFPHVVER  276 (381)
T ss_pred             CEEEECCCCHHHHCCCEEECCCCCCCCCCHHCCCCCCCCCC--CCCCCC-CEEE--ECCCCCCHHHHHHHHHCCCHHHHH
T ss_conf             67780685132212660021454222340110232100336--634474-1277--448632404799997328101122


Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
Q ss_conf             20103189999999977999999987479716766882003653178982473101137345678889999988862828
Q gi|254780153|r  263 LKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIA  342 (391)
Q Consensus       263 i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~  342 (391)
                      ..       +|..--++++.+-+.|+..+++.-+=..|..  .  =.++++.|.+..+...+.++-. =+..-|.++|+ 
T Consensus       277 V~-------~Wd~Ev~ktRy~v~eLE~igG~~QlG~kPk~--H--DLv~FEtPgf~Eia~~~kr~Gy-FLY~ELKkRgi-  343 (381)
T TIGR02539       277 VK-------RWDEEVKKTRYFVAELEDIGGFKQLGVKPKE--H--DLVKFETPGFHEIAKKHKRRGY-FLYEELKKRGI-  343 (381)
T ss_pred             CC-------CHHHHHHHHHHHHHHHHHCCCEEECCCCCCC--C--CCEEECCCCCHHHHCCCCCCCC-CHHHHHHHCCC-
T ss_conf             02-------3156677765788876421788864868882--5--6414448840134144879776-40566531583-


Q ss_pred             ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             726655676750568615888999999999999999999
Q gi|254780153|r  343 YDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       343 ~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .||..+.+  +.|-.|+|| ++.|.|+-.++++++-..+
T Consensus       344 ~GI~~G~T--k~~K~SvYG-L~~Eqv~~Vv~sf~eI~e~  379 (381)
T TIGR02539       344 VGIRSGQT--KEIKLSVYG-LTKEQVEYVVDSFKEIVEE  379 (381)
T ss_pred             EECCCCCC--EEEEEEEEC-CCCCHHHHHHHHHHHHHHH
T ss_conf             00178874--277643312-7521144446789999985


No 218
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.01  E-value=3e-07  Score=65.47  Aligned_cols=313  Identities=15%  Similarity=0.132  Sum_probs=182.1

Q ss_pred             HHHHHHHHCCCC------CCC---CHHHHHHHH-HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             999863210365------328---988999999-9999999996889985799974873489998753205789707997
Q gi|254780153|r   28 SLGILEGALLGR------SHR---CVLGKERIN-KAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        28 v~~~~~~~~l~~------sHR---s~~f~~i~~-~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      |++++...+-+.      ++|   +.+|.+.++ -+.++.++||+..-   +=+-+=||+.|..++.+-|+++||.++..
T Consensus        42 V~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~---anVQPhSGs~AN~av~~All~pGD~imgm  118 (413)
T COG0112          42 VMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY---ANVQPHSGSQANQAVYLALLQPGDTIMGL  118 (413)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHHCCCCCEEEEC
T ss_conf             999974577530115899763567872179999999999999848875---04588875689999999973898857505


Q ss_pred             ---ECC-HHHH-HHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECCCCCC
Q ss_conf             ---073-6888-88765323876306740-57776578676785-----565799742024202203--20350256861
Q gi|254780153|r   98 ---WES-FGLG-WMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPESREG  164 (391)
Q Consensus        98 ---~g~-~~~r-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~~~~~  164 (391)
                         .|+ -+.. ......++  .++..+. .+.....|.+++..     .+.+.++-- +.---..|  ..+.++...++
T Consensus       119 ~l~~GGHltHg~~v~~sG~~--~~~v~Y~vd~et~~IDyD~~~k~a~e~kPKlii~G~-SaY~r~id~~~~reIad~VGA  195 (413)
T COG0112         119 DLSHGGHLTHGSPVNFSGKL--FNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGG-SAYSRPIDFKRFREIADEVGA  195 (413)
T ss_pred             CCCCCCCCCCCCCCCCCCCE--EEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECC-CCCCCCCCHHHHHHHHHHHCC
T ss_conf             67878765579987766405--776762406334751799999999984997899776-035544678999999987193


Q ss_pred             EEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf             48864011011-----0254556857999700120017665154456778887654114457783123200112321033
Q gi|254780153|r  165 LVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL  239 (391)
Q Consensus       165 llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (391)
                      .+++|+.--.|     ..|=+....|++.++.+|-|-||=|=-++.-+++..+++....    .                
T Consensus       196 ~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrGG~Il~~~eel~kkin~aV----F----------------  255 (413)
T COG0112         196 YLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRGGIILTNDEELAKKINSAV----F----------------  255 (413)
T ss_pred             EEEEHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHC----C----------------
T ss_conf             67721778888874566799987552675775347789984179836299998764000----7----------------


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf             47864466644889999999986201031899999999779999999874797167668820036531789824731011
Q gi|254780153|r  240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS  319 (391)
Q Consensus       240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~  319 (391)
                        ..+-.-|-.+.|.+...++.+.++- +.+...++..++++.+-+.+.+.+ +....  -..-+.. +.+.+.+.... 
T Consensus       256 --Pg~qggpl~HviAakaVa~~Eal~p-~fk~Ya~qVv~NAkaLAe~l~~~G-~~vvs--GgTdnHl-~lVDl~~~~~~-  327 (413)
T COG0112         256 --PGLQGGPLMHVIAAKAVAFKEALEP-EFKEYAKQVVKNAKALAEALKERG-FKVVS--GGTDNHL-VLVDLRSKGLT-  327 (413)
T ss_pred             --CCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEEC--CCCCCEE-EEEECCCCCCC-
T ss_conf             --7667882788899999999997281-389999999999999999999769-86715--8864448-99972467987-


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCEEECCCCC------CCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             37345678889999988862828726655------6767505686158----8899999999999999999999
Q gi|254780153|r  320 LDINSQKSFCKSMLSFLEKEEIAYDIGSY------RDAPLGLRVWVGV----TVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       320 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------r~~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                               -+.....|.+.|+.+.-+.-      ...+.|+|||+--    -..++++....+.|..++...+
T Consensus       328 ---------Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~  392 (413)
T COG0112         328 ---------GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK  392 (413)
T ss_pred             ---------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             ---------78999999970976526889999988878766340668886357988999999999999995500


No 219
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.00  E-value=3.4e-07  Score=65.17  Aligned_cols=281  Identities=17%  Similarity=0.153  Sum_probs=160.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..+=+..   .. +..+||.+|+.+++++++++|+.+++...-||.  ++.+......+.+++..
T Consensus        62 gnPT~~~lE~~l---a~LEg~~---~a-~~~sSGmaAi~~~ll~ll~~Gdhiv~~~~~Yg~T~~l~~~~l~~~Gi~v~~v  134 (384)
T PRK06434         62 GNPTVQAFEEKY---AVLENAE---HA-LSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYI  134 (384)
T ss_pred             CCHHHHHHHHHH---HHHHCCC---CE-EEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf             886699999999---9984998---09-9976899999999999618999899807982777999998887569727995


Q ss_pred             ECCCCCCCCHHHCCC-CCCEEEEEEECCCCEEEC---CEEEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCHHC
Q ss_conf             057776578676785-565799742024202203---203502568614886401--10110254556857999700120
Q gi|254780153|r  121 TAPYGSLPDFSKVDF-DRDVVFVWNGTTSGVCVP---DVGFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQKV  194 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~-~~~v~~~h~ETstGv~~~---~~~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQK~  194 (391)
                      +..     +++.++. .....+++.||.+--...   +..+....++..+|||-+  +-+...|++. ++|+++-|.-|-
T Consensus       135 d~~-----~~~~~~~~~~~tklv~~Esp~NP~l~v~Di~aia~~A~~~~vvVDNTfatP~~~~Pl~~-GaDivihS~TKY  208 (384)
T PRK06434        135 DTD-----RLNSLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHENDVIVDATFASPYNQNPLDL-GADVVIHSATKY  208 (384)
T ss_pred             CCC-----CHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCC-CCCEEEEECCCC
T ss_conf             786-----57889607468649999889998763156799997641598477547652013783103-898799703520


Q ss_pred             CCCCCC--CEEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             017665--15445677-888765411445778312320011232103347864466644889999999986201031899
Q gi|254780153|r  195 LGGEAG--FGIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSA  271 (391)
Q Consensus       195 l~~ppG--l~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~  271 (391)
                      ++|-+.  .|+++.++ +.+++.....                    ...|.   +++-+.-|.+...|      ..+.-
T Consensus       209 i~GHsDvl~G~v~~~~~~~~~~l~~~~--------------------~~~G~---~~sP~~a~L~lrGL------~TL~l  259 (384)
T PRK06434        209 ISGHSDVVMGVAGTNNKSIFNNLVERR--------------------KTLGS---NPDPIQAYLALRGL------KTLGL  259 (384)
T ss_pred             CCCCCCCCCCEEECCCHHHHHHHHHHH--------------------HCCCC---CCCHHHHHHHHCCC------CCHHH
T ss_conf             068888668645058899999999998--------------------61489---89868899998267------63999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
Q ss_conf             999999779999999874797167668820--------036531789824731011373456788899999888628287
Q gi|254780153|r  272 CVERCNANAAVLFQFIQENDWIENLAVDET--------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAY  343 (391)
Q Consensus       272 ~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~--------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  343 (391)
                      |.+||.+++..+-+|+++++..... ..|.        .-....+.|.+.+.       +    ....+...|.--..++
T Consensus       260 Rm~r~~~nA~~vA~~L~~hp~V~~V-~yPgle~ak~~~~g~gg~~sf~l~~~-------~----~a~~f~~~l~l~~~a~  327 (384)
T PRK06434        260 RMEKHNKNGMELARFLRDSKKISNV-YYPDTEIGKKVLRGFGGMLSFELRSM-------E----DVHKFIRNLEIPMVAA  327 (384)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEE-CCCCHHHHHHHHCCCCCEEEEEECCH-------H----HHHHHHHHCCCCEEEC
T ss_conf             9999999999999999809993377-48528999998378985589996889-------9----9999998489686603


Q ss_pred             CCCCCCCC----------------------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             26655676----------------------7-50568615888999999999999999999
Q gi|254780153|r  344 DIGSYRDA----------------------P-LGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       344 ~~~~~r~~----------------------~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .+|+.++.                      . .-+|++++    .||++.|++-|+.||.+
T Consensus       328 SlGg~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~~DLi~Dl~qAL~k  384 (384)
T PRK06434        328 SLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIG----IEDIDDLIKDIENALSK  384 (384)
T ss_pred             CCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHCC
T ss_conf             6676660212762235521899999965979296999923----19999999999998675


No 220
>PRK02769 histidine decarboxylase; Provisional
Probab=99.00  E-value=6.5e-07  Score=63.34  Aligned_cols=295  Identities=14%  Similarity=0.091  Sum_probs=168.0

Q ss_pred             HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHHCCC--CCCEEE-EEECCHHHH
Q ss_conf             998632103653289889999999999999996889-9857999748734899987532057--897079-970736888
Q gi|254780153|r   29 LGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALWSLLG--YRGVDV-LAWESFGLG  104 (391)
Q Consensus        29 ~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~nl~~--~~~~~~-~~~g~~~~r  104 (391)
                      +..++.++.+ |.-.-.-.++=.++.+-+.++|++| ++|-=.+ +.|||.+.-.++++--+  ++..++ .....++-.
T Consensus        47 ~NN~Gdp~~~-~~y~~~s~~~E~eVl~~~a~L~~~~~~~~wGyv-TsGGTE~Nl~al~~ARe~~p~~vl~~Se~aHYSi~  124 (380)
T PRK02769         47 INNCGDPYSK-SNYPLNSFDFERDVMNFFAELFKIPFNESWGYI-TNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVS  124 (380)
T ss_pred             CCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE-ECCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHH
T ss_conf             4457898755-877743089999999999998589954587799-06554999999999998679968996673227799


Q ss_pred             HHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC----CC----CCEEEEEEECCCCEEECCEEE--ECCCCCC---EEEEEE
Q ss_conf             8876532387630674-05777657867678----55----657997420242022032035--0256861---488640
Q gi|254780153|r  105 WMSDIRQLSLQDVREF-TAPYGSLPDFSKVD----FD----RDVVFVWNGTTSGVCVPDVGF--IPESREG---LVICDA  170 (391)
Q Consensus       105 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~----~~----~~v~~~h~ETstGv~~~~~~~--~~~~~~~---llivD~  170 (391)
                         .++++.+.....+ ..+.|+. +.+++.    ..    ..+..+-..|.+|..=|+.++  ++++++.   -+=|||
T Consensus       125 ---Kaa~llgi~~~~V~~~~~G~m-d~~~L~~~i~~~~~~P~iv~at~GTT~~GaiD~i~~i~~i~~~~g~~~~wlHvDa  200 (380)
T PRK02769        125 ---KIARLLRIKSRVITSLPNGEI-DYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADA  200 (380)
T ss_pred             ---HHHHHCCCCCEEECCCCCCCC-CHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             ---999983998707367999949-7999999999679987799996479888671899999999998299842798412


Q ss_pred             CCHHHHCCC-------CC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC
Q ss_conf             110110254-------55-6857999700120017665154456778887654114457783123200112321033478
Q gi|254780153|r  171 TSAVFARHI-------DF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG  242 (391)
Q Consensus       171 vSs~g~~p~-------d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (391)
                      .-+-...|+       |. .++|-+..+.+|-++.|-+-|++..+++-+++...   .   ..|+.-.   +       .
T Consensus       201 A~gG~~lpf~~~~~~~~~~~~~dSis~d~HK~~~~p~~~gv~l~r~~~~~~~~~---~---~~Yi~s~---d-------~  264 (380)
T PRK02769        201 ALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISV---D---VDYIGSR---D-------Q  264 (380)
T ss_pred             CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHHHHHCCC---C---CCCCCCC---C-------C
T ss_conf             023324332677545789888897998773457887755999987256541143---6---8703789---8-------2


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
Q ss_conf             64466644889999999986201031899999999779999999874797167668820036531789824731011373
Q gi|254780153|r  243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI  322 (391)
Q Consensus       243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~  322 (391)
                      ..-.|=|-+.+..+-.+|..+= ..|+.++.+++.++++.+++.+.+.+ +..+. +|.  |. +|+|..+++.      
T Consensus       265 TI~GSR~G~~~~~~W~~l~~lG-~~Gy~~~v~~~~~~A~yl~~~L~~~G-i~~~~-~P~--s~-~Vvf~~p~e~------  332 (380)
T PRK02769        265 TISGSRNGHTALLLWAAIRSLG-SKGLRQRVQHCLDMAQYAVDRLQANG-IPAWR-NPN--SI-TVVFPCPSER------  332 (380)
T ss_pred             CEECCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEE-CCC--CE-EEEECCCCHH------
T ss_conf             2442576678999999999878-98899999999999999999998729-87470-788--53-7996289988------


Q ss_pred             HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             456788899999888628287266556767505686158889999999999999
Q gi|254780153|r  323 NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       323 ~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                           +.         ++..+..     .++..||=+|+.++.+.++.+++-|-
T Consensus       333 -----i~---------~kw~Ls~-----~~~~~HiVvMPhVt~e~iD~fl~DL~  367 (380)
T PRK02769        333 -----IW---------KKWHLAT-----SGNQAHIITMPHHNKQQIDSLIDELI  367 (380)
T ss_pred             -----HH---------HCEEEEC-----CCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf             -----85---------0746721-----59826999899999999999999999


No 221
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.00  E-value=2.9e-06  Score=59.25  Aligned_cols=323  Identities=14%  Similarity=0.092  Sum_probs=161.5

Q ss_pred             CHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEE
Q ss_conf             968999986321036--53289889999999999999996889-9857999748734899987532057-89-7079970
Q gi|254780153|r   24 RPGWSLGILEGALLG--RSHRCVLGKERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAW   98 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~--~sHRs~~f~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~   98 (391)
                      +|+ |.+++++++=.  ..|...-......+.-+.|.+++... +++...|..-||+.++|+++.=... .+ ..++...
T Consensus        71 ~p~-v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~F~~~SGSEAvE~AlKlAr~~tgR~~iis~~  149 (454)
T PRK06931         71 HPA-VMQSIQDVLDSGLPLHTLDLTTPLKDAFSEELLSFLPGEKDEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFS  149 (454)
T ss_pred             CHH-HHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             599-9999999986288711277686799999999998477656724899738974899999999987606998199980


Q ss_pred             CCHHHHHHHHHHHCCC-----------CCEEEEEC------CCCCCCC--HH-----------HCC-CCCCEEEEEEECC
Q ss_conf             7368888876532387-----------63067405------7776578--67-----------678-5565799742024
Q gi|254780153|r   99 ESFGLGWMSDIRQLSL-----------QDVREFTA------PYGSLPD--FS-----------KVD-FDRDVVFVWNGTT  147 (391)
Q Consensus        99 g~~~~r~~~~~~~~~~-----------~~~~~~~~------~~g~~~~--~~-----------~~~-~~~~v~~~h~ETs  147 (391)
                      ++|=++......--+.           ..+.....      |++...+  .+           +++ ....++.+-.|..
T Consensus       150 ~sYHG~T~gals~tg~~~~~~~~~~l~p~~~~~p~p~~~r~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~AAviiEPi  229 (454)
T PRK06931        150 GGYHGMTHGALSLTGNLSAKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVVKPAAVILEAI  229 (454)
T ss_pred             CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf             68899743353110796522256888999668079752357667762336999999999999999706887259999476


Q ss_pred             CC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCC--CEEEEECHH
Q ss_conf             20---22032------035025686148864011011025---4--55685--7999700120017665--154456778
Q gi|254780153|r  148 SG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSPA  209 (391)
Q Consensus       148 tG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~  209 (391)
                      .|   +..+.      .+.+|.++++++|+|=|.+=.++-   +  +.+++  |++  ..-|+|++  |  ++.+..++.
T Consensus       230 qg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRTG~~fa~e~~gv~PDIi--~~gKglgg--G~P~a~~~~~~~  305 (454)
T PRK06931        230 QGEGGVVPAPVSWLQKIREVTQKHGILLIVDEVQAGFARSGKMFAFEHAGIEPDIV--VMSKAVGG--GLPLAVLGIKKE  305 (454)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCEE--EEHHHHCC--CCCEEEEEEHHH
T ss_conf             68889761888998899987511681899503443778677841210258898960--02153248--885489987555


Q ss_pred             HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r  210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE  289 (391)
Q Consensus       210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~  289 (391)
                      . +   .            +.       ....++|+.--|+ ...+..++|+.+++++ +   ..+.+++.+.+.+.++.
T Consensus       306 ~-~---~------------~~-------~~~h~~T~~Gnpl-a~Aaala~L~~i~~e~-l---~~~~~~~G~~l~~~L~~  357 (454)
T PRK06931        306 F-D---A------------WQ-------PAGHTGTFRGNQL-AMATGLATLKILRDEN-L---AQNAQERGEWLTAALRE  357 (454)
T ss_pred             H-C---C------------CC-------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHH
T ss_conf             5-2---4------------67-------8886645689847-8899999999998624-9---99999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCE-EEEEECCCCCCCC---CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCH
Q ss_conf             797167668820036531-7898247310113---734567888999998886282872665567675056861588899
Q gi|254780153|r  290 NDWIENLAVDETTRSNTS-ICMKIVDSDIASL---DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEK  365 (391)
Q Consensus       290 ~~~~~~~~~~~~~rS~~~-v~~~~~d~~~~~~---~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~  365 (391)
                      .-.-.+.+.  +.|.... ..+.+.++.....   ....+......+...+.++|+++..++.  .+..+|+.--=.++.
T Consensus       358 l~~~~p~V~--dVRG~GL~~giElv~~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~--~~nvlr~~PPL~it~  433 (454)
T PRK06931        358 LSKEYPCIG--NVRGRGLMIGIEIVDERKPADATGSYPADGELAAAIQKACFNNKLLLERGGR--NGNVVRLLCPLNITQ  433 (454)
T ss_pred             HHHCCCCEE--EECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCH
T ss_conf             987099888--6313744899998006764322355666689999999999978968954689--999899979901689


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999
Q gi|254780153|r  366 EDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       366 ~dv~~L~~aLe~~~~~~k  383 (391)
                      ++++.++++||.++.+.=
T Consensus       434 ~eid~~l~~l~~al~e~l  451 (454)
T PRK06931        434 AECEEFIKRFKQAVAEAL  451 (454)
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999


No 222
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.00  E-value=3.5e-07  Score=65.08  Aligned_cols=313  Identities=15%  Similarity=0.128  Sum_probs=167.4

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---C-CCCC-EEEEE
Q ss_conf             96899998632103653289889-99999999999999688998579997487348999875320---5-7897-07997
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---L-GYRG-VDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~-~~~~-~~~~~   97 (391)
                      +|+ |.+++.+++-...+-+..| ...-.+.-+.|..+.  |.+...+|+..||+.|+|+++-=.   - ..|. ..+..
T Consensus        93 hp~-I~~Ai~~Ql~~~~~~s~~~~~~~~~~lae~L~~~~--P~~~~~vff~nSGSEAvE~AiKlAr~y~~~~Gk~~ii~~  169 (442)
T TIGR03372        93 NPN-VIAAVENQLAKQPLHSQELLDPLRALLAKTLAALT--PGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAA  169 (442)
T ss_pred             CHH-HHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             899-99999999723683014445689999999999747--888787986388679999999999997326898189999


Q ss_pred             ECCHHHHHHHHHHHCCCCCEE---------EEECCCCCCCCH----HHCC-CCCCEEEEEEECCCC---EEECC------
Q ss_conf             073688888765323876306---------740577765786----7678-556579974202420---22032------
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDF----SKVD-FDRDVVFVWNGTTSG---VCVPD------  154 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~----~~~~-~~~~v~~~h~ETstG---v~~~~------  154 (391)
                      .+.|=++......--+.....         ....+++.....    ++.. ...+++.+-.|+..|   +..|.      
T Consensus       170 ~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~iAaviiEPiqg~gG~~~p~~~yl~~  249 (442)
T TIGR03372       170 SGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPA  249 (442)
T ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             16778747570302478433578878999825557899999999999887559978999984677777874499999999


Q ss_pred             EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             035025686148864011011025---4--5568579997001200176-651544567788876541144577831232
Q gi|254780153|r  155 VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIFR  228 (391)
Q Consensus       155 ~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~~  228 (391)
                      ...+|+++++++|+|=|.+=.++-   +  +..++-=.+...-|+|++= .-++.++.+++..+....   . +      
T Consensus       250 lr~lc~~~gvllI~DEVqtGfGRTG~~fa~e~~gV~PDIvt~gKgLggG~~Pi~av~~~~~i~~~~~~---~-~------  319 (442)
T TIGR03372       250 VRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD---N-P------  319 (442)
T ss_pred             HHHHHHHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECHHHHHHHHC---C-C------
T ss_conf             99999984970323621227984778337654899997686545415887762689750999877624---8-9------


Q ss_pred             CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCE
Q ss_conf             0011232103347864466644889999999986201031899999999779999999874797167-668820036531
Q gi|254780153|r  229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETTRSNTS  307 (391)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~rS~~~  307 (391)
                                ...++|+ .-+-....+...+|+.+++++    ..++.+++.+.+.+.++++..-++ .+.+  .|....
T Consensus       320 ----------~~h~sTf-~Gnpla~aaalavL~~i~~~~----l~~~~~~~G~~l~~~L~~L~~~~p~~V~d--VRG~GL  382 (442)
T TIGR03372       320 ----------FLHTTTF-GGNPLACAAALATINELLEKN----LPAQAAIKGDFLLDGFQQLAAEYPDLIIE--ARGKGL  382 (442)
T ss_pred             ----------CCCCCCC-CCCHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE--EEECCE
T ss_conf             ----------7547888-989999999999999998656----99999999999999999998768781668--564538


Q ss_pred             EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             78-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      .. +.+.++.           ....+...+.++|+.+...+.  -++.+|+.--=.++.++++.++++|+.++
T Consensus       383 m~giE~~~~~-----------~~~~~~~~~~~~gvl~~~~~~--~~~~iri~PPL~it~eeid~~i~~l~~aL  442 (442)
T TIGR03372       383 LMAIEFRDNE-----------IGYAFAKELFQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL  442 (442)
T ss_pred             EEEEEECCCH-----------HHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             9999978816-----------799999999978979985589--98989998895089999999999999869


No 223
>PRK06836 aspartate aminotransferase; Provisional
Probab=98.99  E-value=2.5e-06  Score=59.60  Aligned_cols=326  Identities=16%  Similarity=0.089  Sum_probs=169.0

Q ss_pred             CCCCCCCCCC-CCHHHHHHHHHHHCCCC---CCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHH
Q ss_conf             8886888776-89689999863210365---328---988999999999999999688998-579997487348999875
Q gi|254780153|r   13 RPFFSSGPCA-KRPGWSLGILEGALLGR---SHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMAL   84 (391)
Q Consensus        13 ~~~F~pGP~~-~~p~~v~~~~~~~~l~~---sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~   84 (391)
                      =.+|+-|=-. -+|+.|.+++.+.+-+-   .|+   +.=..++-+.+-+.+++-++++-+ -+|+ ++.|++.++..++
T Consensus        36 VI~l~iG~Pdf~~P~~i~~a~~~a~~~~~~~~~~Y~~~~G~~eLReaIa~~~~~~~g~~~~pe~Ii-it~Ga~~al~~~~  114 (396)
T PRK06836         36 VFDFSLGNPDVEPPAAVKEALRELAEEEDPGMHGYMPNAGYPEVREAVAESLNARFGTPLTADHIV-MTCGAAGALNVVL  114 (396)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEE-ECCCHHHHHHHHH
T ss_conf             588689598999779999999999967998888779874769999999999999868899589889-8588799999999


Q ss_pred             HHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE--
Q ss_conf             320578970799707368888876532387630674057776578676785-----5657997420242022032035--
Q gi|254780153|r   85 WSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF--  157 (391)
Q Consensus        85 ~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~--  157 (391)
                      ..++.+||.+++..=+|-.. ...+...++..+.+.....+..+++++++.     .+.+.++.=..-||...+..+.  
T Consensus       115 ~~ll~pGD~Vlvp~P~y~~y-~~~~~~~g~~~v~v~~~~e~~~~d~~~l~~~i~~~tk~iilnsP~NPTG~v~s~e~l~~  193 (396)
T PRK06836        115 KALLNPGDEVIIFAPYFVEY-KFYVDNHGGKLVVVPPDTEDFQPDLDALEAAITPKTKAVIINSPNNPTGVIYSEETLKA  193 (396)
T ss_pred             HHHCCCCCEEEECCCCCHHH-HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             99669999899827865068-99999849979993167656767999999736756629998689898998679999999


Q ss_pred             ---ECCC------CCCEEEEEECCHHH---HCCC----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCC
Q ss_conf             ---0256------86148864011011---0254----556857999700120017665--1544567788876541144
Q gi|254780153|r  158 ---IPES------REGLVICDATSAVF---ARHI----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVP  219 (391)
Q Consensus       158 ---~~~~------~~~llivD~vSs~g---~~p~----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~  219 (391)
                         ++..      ++.++|.|-+=+-.   +.++    ....--+++.|.-|.++ -||  +|.++.+++..+.......
T Consensus       194 i~~l~~~~~~~~~h~i~vIsDEiY~~l~fd~~~~~s~~~~~d~~i~i~S~SK~~~-m~G~RiG~iv~~~~i~~~~~~~~~  272 (396)
T PRK06836        194 LGALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYKNSIVVYSFSKSLS-LPGERIGYIAVNPEMEDADDLMAA  272 (396)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHCCCEEEEEECCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH
T ss_conf             9999998657528867998057407531389878995774782999964642204-673116999868899999999999


Q ss_pred             CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r  220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD  299 (391)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~  299 (391)
                             ..+.       +.. -+..+.|.+. =++....+    .+ ..  ..+.++++.+.+++.+.+.+ +...  .
T Consensus       273 -------~~~~-------~~~-~~~v~a~~~~-q~a~~~~~----~~-~~--~~~~y~~rrd~l~~~L~~~g-~~~~--~  326 (396)
T PRK06836        273 -------LVFA-------NRI-LGFVNAPSLM-QRVVAKLQ----DA-TV--DISIYKRRRDLLYDALTELG-FEFV--K  326 (396)
T ss_pred             -------HHHH-------HHH-HCCCCHHHHH-HHHHHHHC----CC-CH--HHHHHHHHHHHHHHHHHHCC-CEEC--C
T ss_conf             -------9987-------655-0556588999-99999974----67-26--69999999999999999849-8631--7


Q ss_pred             CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             20036531789824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       300 ~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      |+  +  ...+-+..|..      .    ...+...|.++|+++--|..=....-+|++.  ..+.+.++.-++.|+...
T Consensus       327 P~--G--afyl~~~~p~~------d----~~~f~~~l~e~gV~vvPG~~Fg~~g~vRls~--a~~~e~i~eal~rl~~~~  390 (396)
T PRK06836        327 PQ--G--AFYLFPKSPIE------D----DVAFVEKAQKYNILLVPGSGFGAPGYFRLAY--CVDTEQIERSLPAFEKLA  390 (396)
T ss_pred             CC--E--EEEEEECCCCC------C----HHHHHHHHHHCCEEEEECCCCCCCCCEEEEE--CCCHHHHHHHHHHHHHHH
T ss_conf             88--1--68998618999------9----9999999996999998274359998089997--089999999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  380 YFQK  383 (391)
Q Consensus       380 ~~~k  383 (391)
                      ++.|
T Consensus       391 ~e~k  394 (396)
T PRK06836        391 KEYK  394 (396)
T ss_pred             HHHC
T ss_conf             9863


No 224
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=98.99  E-value=3.3e-06  Score=58.84  Aligned_cols=303  Identities=13%  Similarity=0.069  Sum_probs=158.6

Q ss_pred             HHHHHHHHHHHCCCCCCCCHH---HHHHHHHHHHHHHHHHCCCCCCE-EEEECCCCHHHHHHHHHHCCCCCC---EEEEE
Q ss_conf             689999863210365328988---99999999999999968899857-999748734899987532057897---07997
Q gi|254780153|r   25 PGWSLGILEGALLGRSHRCVL---GKERINKAIQLTRKVLEVPENYR-IAIVPASDTGAVEMALWSLLGYRG---VDVLA   97 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHRs~~---f~~i~~~~~~~l~~l~~~p~~y~-v~~l~GsgT~~~ea~~~nl~~~~~---~~~~~   97 (391)
                      |..+++++...+-. .|+=++   ..++-+.+.+.+++-++.+-+-+ -++++.|++.++..+++-++.+++   .+++.
T Consensus        15 P~~i~~al~~a~~~-~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~d~~I~~t~Ga~~al~~~~~~~~~~gd~~~~Vlv~   93 (350)
T TIGR03537        15 PPIIRNALKNAVPE-VSQYPSAAGTKALRDAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFG   93 (350)
T ss_pred             CHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             79999999996021-58998984749999999999999868998978779987883899999999973888778769994


Q ss_pred             ECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCE
Q ss_conf             073688888765323876306740--57776578676785-----565799742024202203203-----502568614
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGL  165 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~l  165 (391)
                      +=.|..- ...+. ..+..+..+.  ...|...++++++.     .+.+.++.-..-||...+..+     .+|..++..
T Consensus        94 ~P~y~~y-~~~~~-~~g~~~~~v~l~~~~g~~~d~e~l~~~~~~~~~~i~l~nP~NPTG~v~s~~~l~~l~~~a~~~~~~  171 (350)
T TIGR03537        94 TPGYPVY-ERGAL-FAGGEPTPVKLKEEDGFLLRLEKVDKEILKETKIVWINYPHNPTGAVAPRSYLEETIAICQEHNII  171 (350)
T ss_pred             CCCCCCH-HHHHH-HCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEE
T ss_conf             6987306-99999-769989997535544887799999974666871999899989836476999999999863236907


Q ss_pred             EEEEECCH---HHHCCC-----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             88640110---110254-----556857999700120017665--15445677888765411445778312320011232
Q gi|254780153|r  166 VICDATSA---VFARHI-----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       166 livD~vSs---~g~~p~-----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      +|.|-+=+   ++..+-     +.+++ +++.|.-|.++. ||  +|.++.+++.+++......                
T Consensus       172 vi~DE~Y~~l~~~~~~~~~~~~~~~~~-i~~~S~SK~~~~-pGlR~G~~~~~~~li~~~~~~~~----------------  233 (350)
T TIGR03537       172 LCSDECYTEIYFGEPPHSALEVGMENV-LAFHSLSKRSGM-TGYRSGFVAGDEKLISFLKKLRA----------------  233 (350)
T ss_pred             EEEEHHHHHHHCCCCCCCHHHHCCCCE-EEEECCCCCCCC-CCCEEEEEECCHHHHHHHHHHHH----------------
T ss_conf             984312245534899877556346877-999667545046-77559999789999999999862----------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS  315 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~  315 (391)
                            .-..++|.. .-.+...++.   .+.-+..+.+.++++.+.+.+++...+ +.....+    +..-+-+.+++.
T Consensus       234 ------~~~~~~~~~-~q~a~~~~~~---~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~p~----g~~~~w~~~~~~  298 (350)
T TIGR03537       234 ------NFGVASPDF-VQAAAKAAWS---DDSHVIERRKIFRRKRDLFLEFFNKKG-LEYLYPD----ATFYLWVKVPNG  298 (350)
T ss_pred             ------HCCCCHHHH-HHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC----CEEEEEEECCCC
T ss_conf             ------067772899-9999999956---809999999999999999999986489-8882688----225998979999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             10113734567888999998886282872665-5676750-5686158889999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      .    +       ..++...+.++|+++.-|. +...+.+ |||+..  .+.++++..++-||
T Consensus       299 ~----~-------~~~~~~~ll~~gV~v~pG~~Fg~~~~~~~Rl~~~--~~~e~l~ealrrl~  348 (350)
T TIGR03537       299 I----S-------SKDYALRLLENGIVVAPGENFGSGEEGYVRVALV--PTLEECEEALRIWE  348 (350)
T ss_pred             C----C-------HHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHH
T ss_conf             8----9-------9999999997998997673118999986999972--89999999999986


No 225
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.99  E-value=2.2e-06  Score=59.92  Aligned_cols=320  Identities=16%  Similarity=0.101  Sum_probs=176.2

Q ss_pred             CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             9689999863210--3653289889999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|. |.+++.+++  +.+-|...-..+..-+.-+.|..++-.+ .+..+|+.-|||-++|+++-=--  ..+..++.-.+
T Consensus        74 hP~-Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~  151 (447)
T COG0160          74 HPR-VVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDG  151 (447)
T ss_pred             CHH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC-CCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             989-999999999973013577666336999999999758865-677699568837789999999999858984899788


Q ss_pred             CHHHHHHHHHHHCC----------CCCEEEEECCCCCC---C-C----------HHHCC--------CCCCEEEEEEECC
Q ss_conf             36888887653238----------76306740577765---7-8----------67678--------5565799742024
Q gi|254780153|r  100 SFGLGWMSDIRQLS----------LQDVREFTAPYGSL---P-D----------FSKVD--------FDRDVVFVWNGTT  147 (391)
Q Consensus       100 ~~~~r~~~~~~~~~----------~~~~~~~~~~~g~~---~-~----------~~~~~--------~~~~v~~~h~ETs  147 (391)
                      .|=++-..-+.--+          .....+...|+-..   + .          .+.++        ....++.+-.|+.
T Consensus       152 afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpI  231 (447)
T COG0160         152 AFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPI  231 (447)
T ss_pred             CCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf             65563266687545766533578899998588168865567555663555689999999998740478775469998421


Q ss_pred             CC---EEECC------EEEECCCCCCEEEEEECCHHHHCCCCC-----CCC--EEEEECCHHCCCCCCCCEEEEECHHHH
Q ss_conf             20---22032------035025686148864011011025455-----685--799970012001766515445677888
Q gi|254780153|r  148 SG---VCVPD------VGFIPESREGLVICDATSAVFARHIDF-----NKL--DVVTFSAQKVLGGEAGFGIIILSPASV  211 (391)
Q Consensus       148 tG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p~d~-----~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al  211 (391)
                      .|   +..+.      ...+|++++.++|+|=|++=.++-=.|     +++  |++  ..-|.|++===++.|+.+++..
T Consensus       232 QgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDiv--t~aK~ig~G~Pl~avv~r~ei~  309 (447)
T COG0160         232 QGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLAKSLGGGLPLSAVVGRAEIM  309 (447)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCEE--EECCCCCCCCCEEEEECCHHHC
T ss_conf             07899747989999999999998198899956655888662601224209998789--8533345787206774457760


Q ss_pred             HHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             76541144577831232001123210334786446664488999999998620103189999999977999999987479
Q gi|254780153|r  212 ERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND  291 (391)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~  291 (391)
                      +    ..+                   ...+.|+--=|+ ...+...+|+.|+++ +   ..+|.++..+.+++.++.+.
T Consensus       310 ~----~~~-------------------g~~~~Tf~GNpv-a~Aaa~AvL~vie~e-~---L~~~a~~~G~~l~~~L~~l~  361 (447)
T COG0160         310 D----WPP-------------------GGHGGTFGGNPV-ACAAALAVLDVIEEE-N---LLERAAELGEYLRDRLEELQ  361 (447)
T ss_pred             C----CCC-------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHHHHH
T ss_conf             1----477-------------------654777786989-999999999999874-2---99999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHH
Q ss_conf             71676688200365317898247310113734567888999998886282872665-56767505686158889999999
Q gi|254780153|r  292 WIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLL  370 (391)
Q Consensus       292 ~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~  370 (391)
                      --++.+.|-.-+..+.-+=-+.|.....-+    ......+...+.++|.++...| |   +..+||-.-=.++.++++.
T Consensus       362 ~~~~~IgdVRG~Glm~giE~v~d~~t~~p~----~~~~~~i~~~~~~~Glil~~~G~~---~nviRi~PPL~is~e~~d~  434 (447)
T COG0160         362 EKHPLIGDVRGLGLMIGVELVKDRDTKEPD----AELAAKIVARAFERGLLLLTCGPH---GNVLRILPPLTISDEELDE  434 (447)
T ss_pred             HHCCCEECCCCCCEEEEEEEECCCCCCCCC----HHHHHHHHHHHHHCCCEEECCCCC---CCEEEEECCCCCCHHHHHH
T ss_conf             646744212446507899983378778999----999999999999869888545787---8679982895438999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  371 LCDWLRWVFYFQ  382 (391)
Q Consensus       371 L~~aLe~~~~~~  382 (391)
                      .++.|+.++...
T Consensus       435 ~l~il~~al~~~  446 (447)
T COG0160         435 GLDILEEALKEA  446 (447)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999854


No 226
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT,  Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein 
Probab=98.99  E-value=5.2e-07  Score=63.98  Aligned_cols=309  Identities=15%  Similarity=0.065  Sum_probs=170.7

Q ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHHH
Q ss_conf             999863210365328988999999999999999688998579997487348999875320-5789707997073688888
Q gi|254780153|r   28 SLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGWM  106 (391)
Q Consensus        28 v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~~  106 (391)
                      |.+.+....+..       -...++-.+.++++++...   ++. ..|||.|+++++..+ +++|+.+++-.-.|..-. 
T Consensus         5 v~~~l~s~~~~~-------G~~v~~fE~~~~~~~g~k~---~v~-~~sgt~Al~lal~~l~~~~gdeVi~p~~t~~at~-   72 (352)
T cd00616           5 VEEVLDSGWLTL-------GPKVREFEKAFAEYLGVKY---AVA-VSSGTAALHLALRALGIGPGDEVIVPSFTFVATA-   72 (352)
T ss_pred             HHHHHHCCCCCC-------CHHHHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH-
T ss_conf             999983699779-------8769999999999978593---999-7688999999999869788399998997639899-


Q ss_pred             HHHHHCCCCCEEEEEC-CCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--EECCCCCCEEEEEECCHHHHCC
Q ss_conf             7653238763067405-7776578676785-----565799742024202203203--5025686148864011011025
Q gi|254780153|r  107 SDIRQLSLQDVREFTA-PYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--FIPESREGLVICDATSAVFARH  178 (391)
Q Consensus       107 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--~~~~~~~~llivD~vSs~g~~p  178 (391)
                      .-+...+ ..+...+. +..-..++++++.     .+.+..||.   -|...+..+  .+|+.++..+|-||..++|+.-
T Consensus        73 ~ai~~~G-~~pv~~Di~~~t~~id~~~l~~~i~~~tkaIi~vh~---~G~~~d~~~i~~~~~~~~i~lIeDaA~a~Gs~~  148 (352)
T cd00616          73 NAILLLG-ATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVHL---YGNPADMDAIMAIAKRHGLPVIEDAAQALGATY  148 (352)
T ss_pred             HHHHHCC-CEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC---CCCCCCHHHHHHHHHHCCCEEEEHHHHHCCCCC
T ss_conf             9999859-989984077785775889999762868709999689---898668899999999779899802200216834


Q ss_pred             CC-----CCCCEEEEECCHHCCCCCCCCEEEEE-CHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf             45-----56857999700120017665154456-7788876541144577831232001123210334786446664488
Q gi|254780153|r  179 ID-----FNKLDVVTFSAQKVLGGEAGFGIIIL-SPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLC  252 (391)
Q Consensus       179 ~d-----~~~iDv~~a~sQK~l~~ppGl~~v~~-s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~  252 (391)
                      =+     +..+.+.-+...|.|..- +=|+++. +++..+++......+.......+ .+      ...|.-.--..+.+
T Consensus       149 ~~~~~G~~gd~~~fSF~~~K~it~g-eGG~i~tn~~~~~~~~~~lr~~G~~~~~~~~-~~------~~~G~N~rmsel~A  220 (352)
T cd00616         149 KGRKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKY-EH------EILGYNYRLSEIQA  220 (352)
T ss_pred             CCEECCCCCCCCCCCCCCCCCCCCC-CCEEEEECCHHHHHHHHHHHHCCCCCCCCCC-EE------EECCCCCCHHHHHH
T ss_conf             6712566434253447877567677-7349996999999999999965966998852-46------73683422588899


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf             9999999986201031899999999779999999874797167668820036-531789824731011373456788899
Q gi|254780153|r  253 IEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS-NTSICMKIVDSDIASLDINSQKSFCKS  331 (391)
Q Consensus       253 i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS-~~~v~~~~~d~~~~~~~~~~~~~~~~~  331 (391)
                      .. ...+|+      -++.+.++.++.++...+.+....++......+...+ .-..++.+++...         .....
T Consensus       221 ai-gl~qLk------~ld~~~~~R~~i~~~Y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~l~~~~~---------~~R~~  284 (352)
T cd00616         221 AI-GLAQLE------KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAG---------ESRDE  284 (352)
T ss_pred             HH-HHHHHH------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC---------CCHHH
T ss_conf             99-999999------889999999999999999837899816166699983355799999865021---------05999


Q ss_pred             HHHHHHHCCEEECCCC---C-----------CC---------CCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             9998886282872665---5-----------67---------67505686158889999999999999
Q gi|254780153|r  332 MLSFLEKEEIAYDIGS---Y-----------RD---------APLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       332 ~~~~l~~~g~~~~~~~---~-----------r~---------~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      +.+.|.++|+......   |           ..         ..+++.+-++..++.+|++..++.|+
T Consensus       285 l~~~L~~~gI~~~~~y~p~~~~~~~~~~~~~~~~~~pna~~i~~~~l~LP~~~~Lt~~di~~I~~~IK  352 (352)
T cd00616         285 LIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             HHHHHHHCCCCEEEECCCHHHCHHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             99999987998580283333384989725998899989999984979898999879999999999749


No 227
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=98.99  E-value=1.8e-06  Score=60.53  Aligned_cols=308  Identities=15%  Similarity=0.075  Sum_probs=155.3

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC------CCCC-EEE
Q ss_conf             968999986321036532898899-99999999999996889985799974873489998753205------7897-079
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL------GYRG-VDV   95 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~------~~~~-~~~   95 (391)
                      +|+ |.+++.+++=...|-++.|. +...+.-   +++... ..+.-+++..|||.++|+++.=..      .++. .++
T Consensus        54 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~la---~~L~~~-~~~~~v~f~~sGsEAvE~AlKlAr~y~~~~~~gr~~ii  128 (395)
T PRK03715         54 NPG-MVEALAAQAEKLINPSPAFYNEPMAKLA---GLLTQH-SCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEII  128 (395)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHH---HHHHCC-CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             699-9999999997547677320278999999---998415-58887998187588999999999998624689984599


Q ss_pred             EEECCHHHHHHHHHHHCCCCCEEE------EECCCCCCCCHHHCCC--CCCEEEEEEECCCC---EEECC------EEEE
Q ss_conf             970736888887653238763067------4057776578676785--56579974202420---22032------0350
Q gi|254780153|r   96 LAWESFGLGWMSDIRQLSLQDVRE------FTAPYGSLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD------VGFI  158 (391)
Q Consensus        96 ~~~g~~~~r~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~------~~~~  158 (391)
                      ...++|-++...-..--+......      ...+....-+++.++.  ...++-+-.|...|   +..+.      ...+
T Consensus       129 ~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~l  208 (395)
T PRK03715        129 TFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRAL  208 (395)
T ss_pred             EECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf             97578898740221046864445567898899675554558999973499807999937888779852988999999999


Q ss_pred             CCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             25686148864011011025---4--55685--79997001200176651544567788876541144577831232001
Q gi|254780153|r  159 PESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       159 ~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      |+++++++|+|=|.+=.++-   +  +..++  |++  ...|+|++===++.++.+++. .   .            +. 
T Consensus       209 c~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gKgl~gG~Pl~av~~~~~i-~---~------------~~-  269 (395)
T PRK03715        209 TKQHGLLLIVDEVQTGCGRTGTLFAYELAGIEPDIM--TLGKGIGGGVPLAALLAKAEV-A---V------------FE-  269 (395)
T ss_pred             HHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEE--EECCHHHCCCCEEEEEECHHH-C---C------------CC-
T ss_conf             951897356201103888666853000489999989--975244289852899982674-2---4------------77-


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf             123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M  310 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~  310 (391)
                            ....++|+.-=|+. ..+..++|+.+++++    ...+.+++.+.+.+.++++..-.. +.+  .|...... +
T Consensus       270 ------~g~~g~T~~gnpla-~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~~~~-i~~--vRG~Gl~~~i  335 (395)
T PRK03715        270 ------AGDQGGTYNGNPLM-TAVGYAVISQLVAPG----FLEGVRARGEYLKEKLLELSAERG-LEG--ERGEGLLRAL  335 (395)
T ss_pred             ------CCCCCCCCCCCHHH-HHHHHHHHHHHHCCC----HHHHHHHHHHHHHHHHHHHHCCCC-CEE--EEECCEEEEE
T ss_conf             ------89888798997189-999999999996268----999999999999999998650399-135--7435589999


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      .+..+..        .. .......+..+|.++.. .   .++.+|+.--=.++.++++.+++.||.++.++
T Consensus       336 el~~~~~--------~~-~~~~~~~~~~~gll~~~-~---~~n~irl~PpL~it~~eid~~~~~l~~aL~~l  394 (395)
T PRK03715        336 LLGKDIG--------PQ-IVEKARDMQPDGLLLNA-P---RPNLLRFMPALNVTTDEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             EECCCCC--------HH-HHHHHHHHHHCCEEEEC-C---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             9678870--------89-99999999839989922-8---99989997994388999999999999999986


No 228
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.98  E-value=8.5e-07  Score=62.59  Aligned_cols=323  Identities=17%  Similarity=0.123  Sum_probs=153.3

Q ss_pred             CHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC--CCCEEEEEECC
Q ss_conf             96899998632103-6532898899999999999999968899857999748734899987532057--89707997073
Q gi|254780153|r   24 RPGWSLGILEGALL-GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG--YRGVDVLAWES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l-~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~--~~~~~~~~~g~  100 (391)
                      +|+ |.+++.+++= +.++-.+  .+.-.+.-+.|.+++  |.-..| ++..|||.+.|+++.=--.  .+..++...|.
T Consensus        70 ~p~-v~~Ai~~q~~~~~~~~~~--~~~~~~lAe~l~~~~--p~~~~v-~f~~sGsEAve~AiklAR~~tgr~~ii~~~g~  143 (429)
T PRK00062         70 HPA-VVEAVIEAAEKGLSFGAP--TELEVKLAELVIERV--PSVEMV-RMVNSGTEATMSAIRLARGFTGRDKIIKFEGC  143 (429)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHC--CCCCEE-EEECCHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             799-999999998635766699--789999999998558--987779-87187699999999999761188762111465


Q ss_pred             HHHHHHHHHHH-------CCCCC---------EEEEECCCCCCCCHHH-CC-CCCCEEEEEEECCC---CEEECCE----
Q ss_conf             68888876532-------38763---------0674057776578676-78-55657997420242---0220320----
Q gi|254780153|r  101 FGLGWMSDIRQ-------LSLQD---------VREFTAPYGSLPDFSK-VD-FDRDVVFVWNGTTS---GVCVPDV----  155 (391)
Q Consensus       101 ~~~r~~~~~~~-------~~~~~---------~~~~~~~~g~~~~~~~-~~-~~~~v~~~h~ETst---Gv~~~~~----  155 (391)
                      |=++.-..+..       .+..+         ...+..+++....+++ ++ ....++.+-.|...   |+..|..    
T Consensus       144 YHG~~d~~l~~~gs~~~~~~~p~~~g~p~~~~~~~~~~~~nd~~~~~~~l~~~~~~iAAvivEPi~g~~G~i~p~~~yl~  223 (429)
T PRK00062        144 YHGHSDSLLVKAGSGVATLGLPDSPGVPADFAKNTLTAPYNDLEAVKAAFEEYGDEIACVIVEPVAGNMGCVPPLPGFLE  223 (429)
T ss_pred             CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCHHHHH
T ss_conf             66886205653489754467899889976444752630577788889999856886569997432377861448889999


Q ss_pred             --EEECCCCCCEEEEEECCHHHH--CC--CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             --350256861488640110110--25--455685799970012001766515445677888765411445778312320
Q gi|254780153|r  156 --GFIPESREGLVICDATSAVFA--RH--IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       156 --~~~~~~~~~llivD~vSs~g~--~p--~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
                        +.+|+++++|+|+|=|.+=.-  .-  .+..++-=.+..--|+|++===++.++.+++..+...   +...       
T Consensus       224 ~lr~lc~~~giLlI~DEV~tGfRtG~~~a~e~~gv~PDi~t~gK~lggG~Pi~av~~~~eim~~~~---~~g~-------  293 (429)
T PRK00062        224 GLRELTDENGALLIFDEVMTGFRVAYGGAQGYYGVTPDLTTLGKVIGGGLPVGAFGGRREIMEQLA---PLGP-------  293 (429)
T ss_pred             HHHHHHCCCCEEEEEECCCCCEECCCCHHHCCCCCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHC---CCCC-------
T ss_conf             999996046647999714257005764354178998968996323479875378867799998637---5898-------


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf             01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC  309 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~  309 (391)
                               ...++|++--|+ ...+...+|+.+++++=+++..+.-+...+.+.+..++.+    ++.+-..+..+.. 
T Consensus       294 ---------~~~~gTf~gnpl-a~AAa~a~L~~l~~~~l~~~~~~~G~~l~~~l~~~~~~~~----~~~~v~G~G~m~~-  358 (429)
T PRK00062        294 ---------VYQAGTLSGNPL-AMAAGLATLRLLDQEGVYETLDALTDRLAEGLKEAAEKAG----IPLVVNRVGSMFG-  358 (429)
T ss_pred             ---------CCCCCCCCCCHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC----CCEEEEEECCEEE-
T ss_conf             ---------412587888879-9999999999997357999999999999999999998779----9879996574789-


Q ss_pred             EEECCCCCCCCC-H-HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             982473101137-3-4567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r  310 MKIVDSDIASLD-I-NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       310 ~~~~d~~~~~~~-~-~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      +.+.+....+.. . ..+......+...+.++|+.+...++.    ...++  -.++++||+..++++|.+|++++
T Consensus       359 i~f~~~~~~~~~~~~~~d~~~~~~~~~~m~~~Gv~~~p~~~~----~~~ls--~aht~~did~~l~a~~~al~~l~  428 (429)
T PRK00062        359 IFFTDEPVTNYEDAKASDTERFARFFHAMLEEGVYLAPSQFE----AGFVS--TAHTDEDIEKTLAAAREAFAALA  428 (429)
T ss_pred             EEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC----CCEEE--CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             996489888989986442999999999999788644786424----71103--35899999999999999999984


No 229
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.97  E-value=5.6e-07  Score=63.74  Aligned_cols=312  Identities=15%  Similarity=0.104  Sum_probs=177.1

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---C-CC-CEEEEE
Q ss_conf             9689999863210365328988999-9999999999996889985799974873489998753205---7-89-707997
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---G-YR-GVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---~-~~-~~~~~~   97 (391)
                      +|. +.+++..+.=...|-|.-|.. ...+.-+.|-++..  ...+|+| .-|||.++|+++----   . ++ ...+.-
T Consensus        60 hP~-iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~--~~d~vff-~NSGaEA~EaAiKlARk~~~~~~k~~Iia~  135 (404)
T COG4992          60 HPA-LVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP--FADRVFF-CNSGAEANEAALKLARKYTGDPEKSKIIAF  135 (404)
T ss_pred             CHH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC--CCCEEEE-CCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             989-999999999776211313378699999999996286--6668997-578389999999999997088887579997


Q ss_pred             ECCHHHHHHHHHHHCCCCCE---------EEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------EEEEC
Q ss_conf             07368888876532387630---------67405777657867678556579974202420---22032------03502
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDV---------REFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------VGFIP  159 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------~~~~~  159 (391)
                      .++|-+|-......-++...         .....|+|.+..++.. ...+++.+-.|+..|   |..+.      .+.+|
T Consensus       136 ~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~a-i~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lC  214 (404)
T COG4992         136 ENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAA-IDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELC  214 (404)
T ss_pred             CCCCCCCCCEEEECCCCHHHCCCCCCCCCCCEECCCCCHHHHHHH-HCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             477577662336656884222678899999536178998999987-3657589998266688898779989999999999


Q ss_pred             CCCCCEEEEEECCHHHHCCC-----CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             56861488640110110254-----5568579997001200176651544567788876541144577831232001123
Q gi|254780153|r  160 ESREGLVICDATSAVFARHI-----DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       160 ~~~~~llivD~vSs~g~~p~-----d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      ..+++|+|+|=|++=.++-=     ++.++.=.+...-|+|||=-=+|.++.++.+.+                      
T Consensus       215 d~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG~PigA~la~~~~~~----------------------  272 (404)
T COG4992         215 DEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGFPIGAMLATEEIAS----------------------  272 (404)
T ss_pred             HHHCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECHHHHH----------------------
T ss_conf             8719299996431388866317898974888777886012458833235577426662----------------------


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEEC
Q ss_conf             210334786446664488999999998620103189999999977999999987479716766882003653178-9824
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIV  313 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~  313 (391)
                      .......++|+.-=|. ...+-..+|+.+.+++    ..++.+++.+.+.+.+....--++++  .+.|...... +.+.
T Consensus       273 ~~~~G~HgSTfGGNpL-acAv~~a~l~~l~~e~----ll~~v~~~g~~~~~~L~~l~~~~~~v--~~vRG~GLmiGiel~  345 (404)
T COG4992         273 AFTPGDHGSTFGGNPL-ACAVALAVLEVLLEEG----LLENVREKGEYLLQRLRELKRRYPLV--KEVRGRGLMIGIELK  345 (404)
T ss_pred             CCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCCE--EEEECCEEEEEEEEC
T ss_conf             4788765677786799-9999999999980030----89999999999999999975127721--224215049999944


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             73101137345678889999988862828726655676750568615888999999999999999999999
Q gi|254780153|r  314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      ++.           ..+++...+.++|+.+-..+    ++.+|..--=.++.++++..+++|+.++...-.
T Consensus       346 ~~~-----------~a~~~~~~~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~al~~~~~  401 (404)
T COG4992         346 EPY-----------RARDIVRALREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAASA  401 (404)
T ss_pred             CCC-----------CHHHHHHHHHHCCEEEECCC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             764-----------57999999997896996078----884884587528899999999999999996542


No 230
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.97  E-value=3.5e-06  Score=58.73  Aligned_cols=320  Identities=10%  Similarity=0.025  Sum_probs=162.7

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             96899998632103653289889--999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|+ +.+++.+++-...|-..-|  .+...+.-++|.+++.... .+++| ..|||.|+|+++.=.-  ..+..++...+
T Consensus        71 ~p~-i~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~P~~~-~~v~f-~~sGSEAvE~AiKlAr~~t~r~~Iis~~~  147 (457)
T PRK05639         71 HPK-LVKAVKEQVELIQHSMIGYTHSERAIRVAEKLVKISPIKN-SKVIF-GLSGSDAVDMAIKVSKFSTRRPWILAFIG  147 (457)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-CEEEE-ECCHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             699-9999999986444765777488799999999997589887-75998-18658999999999864259886999935


Q ss_pred             CHHHHHHH-H-------HHHCCC----CCEEEEEC------CCCCC--CCHHH--------CC--------CCCCEEEEE
Q ss_conf             36888887-6-------532387----63067405------77765--78676--------78--------556579974
Q gi|254780153|r  100 SFGLGWMS-D-------IRQLSL----QDVREFTA------PYGSL--PDFSK--------VD--------FDRDVVFVW  143 (391)
Q Consensus       100 ~~~~r~~~-~-------~~~~~~----~~~~~~~~------~~g~~--~~~~~--------~~--------~~~~v~~~h  143 (391)
                      +|=++-.. .       ..+.+.    .++.....      +++..  .+.++        ++        ....++.+-
T Consensus       148 ~yHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~~p~p~~~r~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~iAavi  227 (457)
T PRK05639        148 AYHGQTLGATSVASFQVSQKRGYSPLMPNVFWLPYPNPYRNIWGINGYEEPNELINRVLDYLENYVFSHVVPPDEVAALF  227 (457)
T ss_pred             CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             77986514000146875445688888998478179863345335676337899999999999999986146889789999


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEEC
Q ss_conf             202420---22032------035025686148864011011025---4--55685--79997001200176651544567
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILS  207 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s  207 (391)
                      .|...|   +..+.      .+.+|+++++++|+|=|.+=.++-   +  +..++  |++  ...|+|++=--++.++.+
T Consensus       228 ~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDii--~~gKgl~~G~plsav~~~  305 (457)
T PRK05639        228 AEPIQGDAGIVVPPENFFKELKKLLNELGILLVMDEVQTGIGRTGKWFASEWFSVKPDMI--IFGKGVASGMGLSGVIGR  305 (457)
T ss_pred             EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCEE--EECCHHCCCCCCEEEEEC
T ss_conf             827668879862898998899999976398687310322776256545664379999999--977221079870799984


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r  208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI  287 (391)
Q Consensus       208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i  287 (391)
                      ++..+.    ...                   ...+|+.-=|+ ...+..++|+.++++.    ..++.+++.+.+.+.+
T Consensus       306 ~~i~~~----~~g-------------------~~~~T~~gnpl-a~Aaa~a~L~~i~~~~----l~~~a~~~g~~l~~~L  357 (457)
T PRK05639        306 KEIMDI----TSG-------------------SALLTPAANPV-ISAAAEATLEIIEEEN----LLKNALEVGNFIMKRL  357 (457)
T ss_pred             HHHHHH----HCC-------------------CCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf             887754----057-------------------65557886529-9999999999999655----9999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             74797167668820036531789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r  288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED  367 (391)
Q Consensus       288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d  367 (391)
                      +++.--.+.+.+-.-+..+. .+.+.+... ..    .......+...+.+.|.++...|  ..++.+|+.--=.++.++
T Consensus       358 ~~L~~~~~~v~dVRG~GL~~-giel~~~~~-~~----~~~~~~~v~~~~~~~Gll~~~~g--~~~nvirl~PPL~it~~e  429 (457)
T PRK05639        358 EEMKEVFEIIGDVRGKGLMI-GVEIVKENG-RP----DPEMTGKICWRAFELGLILPSYG--MFGNVIRITPPLVLTKEV  429 (457)
T ss_pred             HHHHHHCCCEEEECCCCCEE-EEEEECCCC-CC----CHHHHHHHHHHHHHCCCEEECCC--CCCCEEEEECCEECCHHH
T ss_conf             99886389756550378099-999943789-98----99999999999996796881589--999989997893168999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999
Q gi|254780153|r  368 LLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       368 v~~L~~aLe~~~~~~k~  384 (391)
                      ++.+++.|+.+++++=+
T Consensus       430 id~~~~il~~al~ea~a  446 (457)
T PRK05639        430 AEKGLEIIERAIKDALA  446 (457)
T ss_pred             HHHHHHHHHHHHHHHHC
T ss_conf             99999999999999973


No 231
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.97  E-value=6.2e-07  Score=63.47  Aligned_cols=322  Identities=14%  Similarity=0.066  Sum_probs=158.4

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEECCH
Q ss_conf             968999986321036532898899999999999999968899857999748734899987532057-89-7079970736
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAWESF  101 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~g~~  101 (391)
                      +|+ |.+++++++-...+-+.. .+..-+.-+.|.+.+.. +++.|.| ..|||.+.|+++.=--. .| +.++...|+|
T Consensus        71 hp~-V~~Av~~q~~~~~~~~~~-~~~~~~lAe~L~~~~~~-~~~~V~F-~nSGsEA~e~AiklAR~~TgR~~Ii~~~g~Y  146 (433)
T PRK00615         71 HPK-ICDAIQQGASRGTSYGLT-SEQEILFATELFSYLGL-EDHKIRF-VSSGTEATMTAVRLARGITGRSIIIKFLGCY  146 (433)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHCCC-CCCEEEE-ECCHHHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf             889-999999999646656778-88999999999862798-6365997-1883999999999972264887699996776


Q ss_pred             HHHHHHHHH-HCC--CC---C-----------EEEEECCCCCCCCHHHC-C-CCCCEEEEEEECC---CCEEECCE----
Q ss_conf             888887653-238--76---3-----------06740577765786767-8-5565799742024---20220320----
Q gi|254780153|r  102 GLGWMSDIR-QLS--LQ---D-----------VREFTAPYGSLPDFSKV-D-FDRDVVFVWNGTT---SGVCVPDV----  155 (391)
Q Consensus       102 ~~r~~~~~~-~~~--~~---~-----------~~~~~~~~g~~~~~~~~-~-~~~~v~~~h~ETs---tGv~~~~~----  155 (391)
                      -++ ..... ...  ..   .           ......+++....++++ + ....++.+-.|..   .|+..|..    
T Consensus       147 HG~-~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~nd~~~~e~~~~~~~~~iAAvi~EPi~~~~G~i~p~~~yL~  225 (433)
T PRK00615        147 HGH-ADTLLQGISFDETNLDNLTHLVDTDLPHPLTLSLPYNDSQIFHEVMEQLGHRVAGVIFEPICANMGVVLPKPGFIE  225 (433)
T ss_pred             CCC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHH
T ss_conf             787-2001231457876667898777788887852167877399999999851543035787550246887689989999


Q ss_pred             --EEECCCCCCEEEEEECCHHHHC-C---CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             --3502568614886401101102-5---455685799970012001766515445677888765411445778312320
Q gi|254780153|r  156 --GFIPESREGLVICDATSAVFAR-H---IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       156 --~~~~~~~~~llivD~vSs~g~~-p---~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
                        +.+|.++++|||+|=|.+=.-. .   .+..++.-.+..--|+|++===++.++.+++..+...   +..        
T Consensus       226 ~lr~lc~~~giLLI~DEV~tGfRtg~~~a~e~~gV~PDi~t~gK~lggG~Pi~Av~g~~~im~~~~---~~g--------  294 (433)
T PRK00615        226 GIIQTCRRFGSLSIMDEVVTGFRVAFGGAAAIFDVKPDITVYGKILGGGLPAAAVVAHRSIMDHLM---PEG--------  294 (433)
T ss_pred             HHHHHHHHCCEEEEEECCCCCCEECCCHHHHHHCCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHC---CCC--------
T ss_conf             999998765938985134116062540577873998617875455679987056668699998637---789--------


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf             01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC  309 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~  309 (391)
                              ....+.|++--|+ .+.+...+|+.+++++-.+++.++-++..+-+.+.+++.+. ...+  ...-|...+.
T Consensus       295 --------~~~~~gTf~gnpl-a~AAa~AtL~~l~~~~~~~~~~~~g~~l~~gl~~~~~~~g~-~~~v--~~~gs~~~~~  362 (433)
T PRK00615        295 --------TIFQAGTLSGNPL-AMAAGKASIELCREEGFYTQLSNLEQLFLSPIEEMIRSQGF-PVSL--VRYGSMFSFF  362 (433)
T ss_pred             --------CCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CEEE--EEECCEEEEE
T ss_conf             --------8654688740699-99999999999835789999999999999999999997699-8899--7557679999


Q ss_pred             EEECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9824731011373--456788899999888628287266556767505686-158889999999999999999999
Q gi|254780153|r  310 MKIVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       310 ~~~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      |.  +....+...  ..+....+.+...+.++|+.+.       +.++..| +--+.+++||+..+++++.++.+.
T Consensus       363 f~--~~~~~~~~~~~~~d~~~~~~f~~~~l~rGV~~~-------p~~~~~~fis~aHt~edi~~t~~a~~~al~~~  429 (433)
T PRK00615        363 FR--ENRPTNLDEAQLSDVEKFQTFYQEAFSKGVYLS-------PSPFEASFLSSAHSMENLAYAQNVLIDSLEKI  429 (433)
T ss_pred             EC--CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             67--999889999986359999999999997897889-------86322646430249999999999999999999


No 232
>pfam00282 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain.
Probab=98.97  E-value=5.5e-07  Score=63.81  Aligned_cols=283  Identities=13%  Similarity=0.047  Sum_probs=158.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCE-----EEEECCCCHHHHHHHHH
Q ss_conf             8688877689689999863210365----32898899999999999999968899857-----99974873489998753
Q gi|254780153|r   15 FFSSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKAIQLTRKVLEVPENYR-----IAIVPASDTGAVEMALW   85 (391)
Q Consensus        15 ~F~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~-----v~~l~GsgT~~~ea~~~   85 (391)
                      .|-+|++. +|. ++..+-...++.    ..-||-..++=+++.+-|+++++.|+.+.     .=.++.|||.+.-.++.
T Consensus        44 g~~~~~~~-~~~-~~~d~la~~~n~n~~~~~~sPa~t~lE~~vi~wl~~l~g~p~~~~~~~~~~G~~tsGgs~anl~al~  121 (370)
T pfam00282        44 AYFPAGNS-YPS-LLGDMLSDAINCNGFTWESSPACTELENVVMDWLAKMLGLPKEFLGSGQGGGVLQGGSSESNLLALL  121 (370)
T ss_pred             EECCCCCC-HHH-HHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCHHHHHHHHHH
T ss_conf             86578888-899-9999999985636666200826899999999999999668644416888864873647899999999


Q ss_pred             HCCC-----------CCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC----C-------CCEE
Q ss_conf             2057-----------897079970---7368888876532387630674057776578676785----5-------6579
Q gi|254780153|r   86 SLLG-----------YRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF----D-------RDVV  140 (391)
Q Consensus        86 nl~~-----------~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~-------~~v~  140 (391)
                      --..           +....++..   ..++-.   .+++.-+..+..+..+.....+.+.++.    .       -.|.
T Consensus       122 ~AR~~~~~~~~~~g~~~~~~vi~~S~~aH~Sv~---Kaa~~lGlg~~~V~~d~~~~m~~~~L~~~i~~~~~~g~~p~~Vv  198 (370)
T pfam00282       122 AARTKWIRRMKAAGKPLGKLVAYTSDQAHSSIE---KAALIAGVELREIPTDENGKMRGMDLEKAIEEDKENGLIPFFVC  198 (370)
T ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH---HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             999999998764179868749997663279999---99997499836953689888299999999999986799744999


Q ss_pred             EEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHH---HCCC-----CCCCCEEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf             97420242022032035--025686148864011011---0254-----5568579997001200176651544567788
Q gi|254780153|r  141 FVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVF---ARHI-----DFNKLDVVTFSAQKVLGGEAGFGIIILSPAS  210 (391)
Q Consensus       141 ~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g---~~p~-----d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a  210 (391)
                      .+-..|.||..=|+.++  +|++++.-+=||+.-.-.   +..+     ..++.|-+....+|.++.|-+.++++++++.
T Consensus       199 ataGTT~tGaiD~l~~i~~i~~~~~lWlHVDaA~GG~~~l~~~~r~~~~gie~aDSi~~d~HK~l~~P~~~s~~l~rd~~  278 (370)
T pfam00282       199 ATLGTTGSGAFDPLQELGDICNKYDLWLHVDAAYAGSAFICPEFRHWLFGIERADSFSFNPHKWMLVLLDCSALWVRDKG  278 (370)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCHHHHHHHCCCCCCCEEEECCHHCCCCCCCEEEEEEECHH
T ss_conf             86377177134789999999998398088423333478829855777569877857977805501878875899994879


Q ss_pred             HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             87654114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r  211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN  290 (391)
Q Consensus       211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~  290 (391)
                      .-+.. ...   .+.|+....... ..+....+...|- =+-...+-.+|+.+= ..|+..+.+++-++++.+++.+.+.
T Consensus       279 ~l~~~-~~~---~a~Yl~~~~~~~-~~d~~~~t~~~sR-r~~alk~W~~l~~~G-~~g~~~~i~~~~~lA~~~~~~i~~~  351 (370)
T pfam00282       279 ALQQA-LQF---NPEYLGHTDSDV-AVDYGDWQIPLSR-RFRILKLWFVLRSYG-VEGLQNQIRRHVELAKYFEALVRKD  351 (370)
T ss_pred             HHHHH-HCC---CHHHHCCCCCCC-CCCCCCCCCCCCC-CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             98898-656---937748877677-7886777778996-330999999999999-9999999999999999999998509


Q ss_pred             CCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             97167668820036531789824
Q gi|254780153|r  291 DWIENLAVDETTRSNTSICMKIV  313 (391)
Q Consensus       291 ~~~~~~~~~~~~rS~~~v~~~~~  313 (391)
                      +.|+.+.. +   ...+|||+++
T Consensus       352 ~~fEl~~~-p---~l~~V~FR~k  370 (370)
T pfam00282       352 SRFEICAE-R---GLGLVCFRLK  370 (370)
T ss_pred             CCEEEECC-C---CCCEEEEEEC
T ss_conf             99799558-8---7517999859


No 233
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=98.96  E-value=2.2e-06  Score=60.01  Aligned_cols=327  Identities=16%  Similarity=0.015  Sum_probs=175.1

Q ss_pred             HHHHHHHHHHH-CCCCCCC------CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC---CCEE
Q ss_conf             68999986321-0365328------988999999999999999688998579997487348999875320578---9707
Q gi|254780153|r   25 PGWSLGILEGA-LLGRSHR------CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGY---RGVD   94 (391)
Q Consensus        25 p~~v~~~~~~~-~l~~sHR------s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~---~~~~   94 (391)
                      |..+.....+. ++ ++|-      |.=..+++-+-++.|.+|.+.+-.  -+-++-+||.+-|++.+-+...   ++++
T Consensus        35 p~~v~~~~~r~ef~-t~ytpyq~E~sQG~Lq~~~e~Qs~i~eLtGmdv~--naSl~d~a~A~aEa~~ma~~~~~~~r~~v  111 (398)
T cd00613          35 PAVIKRNILENEFY-TAYTPYQPEISQGRLQALFELQTMLCELTGMDVA--NASLQDEATAAAEAAGLAAIRAYHKRNKV  111 (398)
T ss_pred             HHHHHHHHCHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             88989873867671-4699989688699999999999999998688835--63268767799999999999862689989


Q ss_pred             EEEECCHHHHHHHH--HHHCCCCCEEEEECCCCCCCCHHHCC----CCCCEEEEEEECCCCEEECC-E--EEECCCCCCE
Q ss_conf             99707368888876--53238763067405777657867678----55657997420242022032-0--3502568614
Q gi|254780153|r   95 VLAWESFGLGWMSD--IRQLSLQDVREFTAPYGSLPDFSKVD----FDRDVVFVWNGTTSGVCVPD-V--GFIPESREGL  165 (391)
Q Consensus        95 ~~~~g~~~~r~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~v~~~h~ETstGv~~~~-~--~~~~~~~~~l  165 (391)
                      ++............  ..+..+.++..+....+-..++++++    ......++.|=+..|+..+. .  ..++|+.+++
T Consensus       112 lv~~~~hp~~~~v~~t~~~~~g~~i~~v~~~~~G~~d~~~l~~~~~~~~a~v~v~~Pn~~G~~e~~~~~i~~~~h~~gal  191 (398)
T cd00613         112 LVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPNTLGVFEDLIKEIADIAHSAGAL  191 (398)
T ss_pred             EECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHCCCE
T ss_conf             97787780369999998612586589942666777465888875078859999527999627851999999999875986


Q ss_pred             EEEEECC-HHHHCC-CCCCCCEEEEECCHH-----CCCCCCCCEEEEECHHHHHHHHHCCCC------CCCCCHHHCCHH
Q ss_conf             8864011-011025-455685799970012-----001766515445677888765411445------778312320011
Q gi|254780153|r  166 VICDATS-AVFARH-IDFNKLDVVTFSAQK-----VLGGEAGFGIIILSPASVERLEKYVPS------WPLPKIFRMVKG  232 (391)
Q Consensus       166 livD~vS-s~g~~p-~d~~~iDv~~a~sQK-----~l~~ppGl~~v~~s~~al~~~~~~~~~------~~~~~~~~~~~~  232 (391)
                      +++|+-- +++... --.++.|++..-.||     +.|| ||++++.++++....+-.....      +.....+.+...
T Consensus       192 ~~~~~~~~~l~~l~~Pg~~GaDI~~g~~q~~g~P~~~GG-P~~G~~a~~~~l~r~lPgrivg~t~D~~G~~~~~ltlqtr  270 (398)
T cd00613         192 VYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGG-PGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTR  270 (398)
T ss_pred             EEEEECCHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCC
T ss_conf             999744035315557100478779852511466566688-7443266799877358998565047888874215441354


Q ss_pred             HHHHCCCCCCCCCCCCCHHHHHHHH--HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             2321033478644666448899999--99986201031899999999779999999874797167668820036531789
Q gi|254780153|r  233 GRVMEGLFCGETINTPSLLCIEDYI--DALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM  310 (391)
Q Consensus       233 ~~~~~~~~~~~~~~TP~v~~i~al~--~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~  310 (391)
                      .+.  -.+...+-|...-+...++.  .-+.++=. .|+..+.+++-.+++.+.+.|++.++..++ ..     +--=.|
T Consensus       271 eqh--IrRekatsnict~qal~al~a~~Y~~~lG~-~GL~~va~~~~~~A~Yl~~~L~~~~~~~~~-~~-----~~f~EF  341 (398)
T cd00613         271 EQH--IRREKATSNICTGQALLALMAAMYIVYLGP-EGLKEIAERAHLNANYLAKRLKEVGGVLPF-NG-----PFFHEF  341 (398)
T ss_pred             CCC--CCCCCEEECCCHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CC-----CEEEEE
T ss_conf             333--677752881643278999999999998488-638899999999999999999863898268-99-----866699


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC---CCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             8247310113734567888999998886282872665---5676750568615888999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS---YRDAPLGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~r~~~~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      .+.-+...       ....    ..+.++++..|...   |.-.+..+=|..==..+.+|||+|+++|
T Consensus       342 vi~~~~~~-------~~~~----~~l~k~~i~~G~~~~~~y~~~~~~lli~~TE~~skediD~l~~aL  398 (398)
T cd00613         342 VLRLPPLY-------GIRA----EDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEAL  398 (398)
T ss_pred             EEECCCCC-------CHHH----HHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf             99768754-------7689----999973621582866468888997999805899999999999749


No 234
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.96  E-value=6.4e-07  Score=63.37  Aligned_cols=291  Identities=14%  Similarity=0.073  Sum_probs=152.6

Q ss_pred             HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECCHHHHHH-HHHHH-------CC--CCCEEE
Q ss_conf             9999999996889985799974873489998753205--789707997073688888-76532-------38--763067
Q gi|254780153|r   52 KAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWESFGLGWM-SDIRQ-------LS--LQDVRE  119 (391)
Q Consensus        52 ~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~~~~r~~-~~~~~-------~~--~~~~~~  119 (391)
                      +..+.|.+++....+..++|+ .|||.|+|+++.=.-  ..+..++...++|-++.. .....       .+  ......
T Consensus       103 ~lae~L~~~~p~~~~~~~~~~-~SGSEAvE~AiKlAR~~tgr~~iis~~~~YHG~t~~~~~~t~~~~~~~~~~~p~~p~~  181 (446)
T PRK06058        103 AVAEQLNRLTPGDHEKRSALF-NSGAEAVENAVKIARSYTGKPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEV  181 (446)
T ss_pred             HHHHHHHHHCCCCCCCEEEEC-CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
T ss_conf             999999985787666267724-8866899999999997569987999769868898730211278866434678899984


Q ss_pred             EECC----CCC-----CCC----------HHHCCC---CCCEEEEEEECCCC---EEECC------EEEECCCCCCEEEE
Q ss_conf             4057----776-----578----------676785---56579974202420---22032------03502568614886
Q gi|254780153|r  120 FTAP----YGS-----LPD----------FSKVDF---DRDVVFVWNGTTSG---VCVPD------VGFIPESREGLVIC  168 (391)
Q Consensus       120 ~~~~----~g~-----~~~----------~~~~~~---~~~v~~~h~ETstG---v~~~~------~~~~~~~~~~lliv  168 (391)
                      ...|    +..     ...          .+.++.   ...++.+-.|...|   +..|.      .+.+|+++++++|+
T Consensus       182 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~  261 (446)
T PRK06058        182 YRAPLSYPYRDGLLDKELATDGEEAAARAITVIDKQIGADNLAAVIIEPIQGEGGFIVPAEGFLPALLDWCRENGVVFIA  261 (446)
T ss_pred             EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
T ss_conf             56688877666333556222389999999999997438997799997277688898679889999999999874925870


Q ss_pred             EECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf             4011011025---4--55685--79997001200176651--54456778887654114457783123200112321033
Q gi|254780153|r  169 DATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL  239 (391)
Q Consensus       169 D~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (391)
                      |=|.+=.++-   +  +..++  |++  ..-|+|++  |+  +.++.+++..+..                      ...
T Consensus       262 DEV~TGfGRtG~~fa~e~~gv~PDiv--t~gKgl~g--G~Plsav~~~~ei~~~~----------------------~~~  315 (446)
T PRK06058        262 DEVQTGFARTGAMFACEHEGIVPDLI--TTAKGIAG--GLPLSAVTGRAEIMDAP----------------------HVG  315 (446)
T ss_pred             CCCEECCCCCCCCHHHHHCCCCCCEE--EECHHCCC--CCCCCCCCCCHHHHCCC----------------------CCC
T ss_conf             43120677556604565358899854--42210137--88851000469886067----------------------678


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCC
Q ss_conf             4786446664488999999998620103189999999977999999987479716766882003653178-982473101
Q gi|254780153|r  240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIA  318 (391)
Q Consensus       240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~  318 (391)
                      ..++|+.--|+ ...+..++|+.++++. +   ..+.+++.+.+.+.+.+.-.-.+.+.+  .|...... +.+.++...
T Consensus       316 ~~g~T~~Gnpl-a~aaala~L~~i~~e~-l---~~~v~~~g~~l~~~L~~l~~~~~~i~d--vRG~GLm~gielv~~~~~  388 (446)
T PRK06058        316 GLGGTYGGNPV-ACAAALAAIETIESDD-L---VARARQIERLVTDRLGALQAEDDRIGD--VRGRGAMIAIELVKSGTT  388 (446)
T ss_pred             CCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHHHHCCCEEE--EEECCEEEEEEEEECCCC
T ss_conf             76778898989-9999999999998656-9---999999989999999999860997887--764546999999308888


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             1373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                          .........+...+.++|.++...+.  .++.+|+.--=.++.++++.+++.||.+++++
T Consensus       389 ----~~~~~~~~~v~~~~~~~Gll~~~~g~--~g~~lrl~PPL~it~~eid~~l~il~~al~ev  446 (446)
T PRK06058        389 ----EPDAELTKALAAAAHAAGVIVLTCGT--YGNVIRLLPPLVISDELLSEGLDVLEAALADL  446 (446)
T ss_pred             ----CCCHHHHHHHHHHHHHCCCEEECCCC--CCCEEEEECCEECCHHHHHHHHHHHHHHHHHC
T ss_conf             ----95989999999999978988962588--99989997994578999999999999999749


No 235
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.96  E-value=1.8e-06  Score=60.56  Aligned_cols=313  Identities=13%  Similarity=0.087  Sum_probs=160.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             968999986321036532898--89999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|+ |.+++.+++=..+|-+.  -..+...+.-+.|.+++.-..+++|+| ..||+.|+|+++.-..  ..+..++...+
T Consensus        73 ~p~-i~~Av~~Q~~~l~~~~~~~~~~~~~~elae~L~~~~p~~~~~~v~f-~~sGSEAvE~AiklAr~~tgr~~ii~~~~  150 (442)
T PRK05769         73 HPK-VVEAIKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFPKKVFF-TNSGTESNEAAIKLARYYTGRKYIIAFLG  150 (442)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             799-9999999986176745677688899999999998578666757998-18677899999999898659986997248


Q ss_pred             CHHHHHHHHHH--------HCC-C---CCEEEEECC------CCCCCC-------HHHCC--------CCCCEEEEEEEC
Q ss_conf             36888887653--------238-7---630674057------776578-------67678--------556579974202
Q gi|254780153|r  100 SFGLGWMSDIR--------QLS-L---QDVREFTAP------YGSLPD-------FSKVD--------FDRDVVFVWNGT  146 (391)
Q Consensus       100 ~~~~r~~~~~~--------~~~-~---~~~~~~~~~------~g~~~~-------~~~~~--------~~~~v~~~h~ET  146 (391)
                      +|=++......        +.. +   ..+.....|      ++....       ++.++        ....++.+-.|.
T Consensus       151 syHG~t~ga~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~iAavi~EP  230 (442)
T PRK05769        151 AFHGRTYGSMSLTASKPVQRRGFFPLMPGVIHVPYPNPYRNPFGYENPEELGNAVLDFIEDYLFKTLVPPEEVAAIFFEP  230 (442)
T ss_pred             CCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf             67788633653207830110477899999278078973456557789899999999999999987358989789999989


Q ss_pred             CCC---EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCC--EEEEECCHHCCCCCCC--CEEEEECH
Q ss_conf             420---22032------0350256861488640110-110--254--55685--7999700120017665--15445677
Q gi|254780153|r  147 TSG---VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSP  208 (391)
Q Consensus       147 stG---v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~  208 (391)
                      ..|   +..|.      ...+|+++++++|+|=|.+ ||-  .-+  +.+++  |++  ...|+|++  |  +|.++.++
T Consensus       231 v~g~gG~~~p~~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gK~lgg--G~Plsav~~~~  306 (442)
T PRK05769        231 IQGEGGYVVPPKNFFKELRKLADKYGILLIVDEVQTGFGRTGKMFAIEHFGVEPDII--TLAKAIAG--GLPLGAVIGRA  306 (442)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEE--EECCHHCC--CCCEEEEEECH
T ss_conf             777889706898999899999987493587111012777556621310467788889--97401038--87408999806


Q ss_pred             HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r  209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ  288 (391)
Q Consensus       209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~  288 (391)
                      +...    . ..                  ...++|+..-|+. ..+..++|+.++ + +   ...+.+++.+.+.+.+.
T Consensus       307 ~i~~----~-~~------------------g~h~~T~~g~pl~-~aaa~a~L~~le-e-~---l~~~v~~~G~~l~~~L~  357 (442)
T PRK05769        307 ELMF----L-PP------------------GSHANTFGGNPVA-AAAALATLELIE-E-G---LLENAARLGEYLLKRLT  357 (442)
T ss_pred             HHHC----C-CC------------------CCCCCCCCCCHHH-HHHHHHHHHHHH-H-H---HHHHHHHHHHHHHHHHH
T ss_conf             7503----7-77------------------8715189986799-999999999998-8-8---99999999999999999


Q ss_pred             HCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             4797167668820036531-789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r  289 ENDWIENLAVDETTRSNTS-ICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED  367 (391)
Q Consensus       289 ~~~~~~~~~~~~~~rS~~~-v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d  367 (391)
                      ++..-.+.+.  +.|.... ..+.+.++..     .........+...+.++|+++...+    +..+|+.--=.+++++
T Consensus       358 ~l~~~~p~v~--~vRG~Gl~~giel~~~~~-----~~~~~~~~~~~~~~~~~Gvl~~~~g----~~~i~~~PpL~it~~e  426 (442)
T PRK05769        358 ELKEEYEFIG--DVRGLGLMIGVELVKDRK-----EPDPKLRDKVLREAFKRGLLLLGAG----KSAIRIIPPLVITEEE  426 (442)
T ss_pred             HHHHHCCCEE--EECCCCEEEEEEEECCCC-----CCCHHHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHH
T ss_conf             9986299867--603434599999815777-----8799999999999996995993179----9979997994699999


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999999
Q gi|254780153|r  368 LLLLCDWLRWVFYFQ  382 (391)
Q Consensus       368 v~~L~~aLe~~~~~~  382 (391)
                      |+.++++||.++.++
T Consensus       427 id~~~~~l~~al~ev  441 (442)
T PRK05769        427 ADTGLEILEEAIKEV  441 (442)
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             999999999999986


No 236
>PRK09082 putative aminotransferase; Validated
Probab=98.96  E-value=4.5e-06  Score=58.01  Aligned_cols=322  Identities=15%  Similarity=0.052  Sum_probs=173.0

Q ss_pred             CCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCCC-C--HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHH
Q ss_conf             8998886888776-89689999863210365328-9--88999999999999999688998--57999748734899987
Q gi|254780153|r   10 KPKRPFFSSGPCA-KRPGWSLGILEGALLGRSHR-C--VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMA   83 (391)
Q Consensus        10 ~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~sHR-s--~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~   83 (391)
                      +..-++++-|=-. -+|..+++++.+.+-.-.|+ +  .=..++-+.+-+.+++.++..-+  .+| +++.|++.++..+
T Consensus        29 ~~~~I~L~~G~Pd~~~P~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaiA~~~~~~~g~~~~p~~eI-~vT~Ga~~al~~~  107 (386)
T PRK09082         29 EHGAINLSQGFPDFDGPPRLVEALAYAMAAGHNQYPPMTGVAALREAIADKTARLYGRRYDADSEI-TVTAGATEALFAA  107 (386)
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE-EECCCHHHHHHHH
T ss_conf             599887279899998789999999999965999898987719999999999999968998988838-9877889999999


Q ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-
Q ss_conf             5320578970799707368888876532387630674057776578676785-----5657997420242022032035-
Q gi|254780153|r   84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-  157 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-  157 (391)
                      +.-++++||.+++-+=+|..- ...+...+...+.+.-.+.+..+++++++.     .+.+.++.=..-||...+..+. 
T Consensus       108 ~~al~~pGD~Vlv~~P~Y~~y-~~~~~~~G~~~v~vpl~~~~~~~d~~~l~~~i~~~tk~iil~sP~NPTG~v~s~~~l~  186 (386)
T PRK09082        108 ILALVRPGDEVIVFDPSYDSY-APAIELAGGRAVRVALQPPDFRVDWQRFAAAITPRTRLIILNTPHNPSGTVWSAADMD  186 (386)
T ss_pred             HHHHCCCCCEEEEECCCCHHH-HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHH
T ss_conf             999759999899926862879-9999984998999267798888799999963675764999799969736013635599


Q ss_pred             ----ECCCCCCEEEEEECCHHH---HCCC----CCCC---CEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCC
Q ss_conf             ----025686148864011011---0254----5568---579997001200176651--54456778887654114457
Q gi|254780153|r  158 ----IPESREGLVICDATSAVF---ARHI----DFNK---LDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSW  221 (391)
Q Consensus       158 ----~~~~~~~llivD~vSs~g---~~p~----d~~~---iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~  221 (391)
                          +|..++.++|.|-+=+-.   +.+.    ...+   --+++.|.-|.++ .||+  |.++..++.+++..+.+   
T Consensus       187 ~l~~la~~~~i~ii~DE~Y~~l~~d~~~~~s~~~~~~~~~~~i~i~S~SK~~~-~~G~RiG~~v~p~~l~~~~~~~~---  262 (386)
T PRK09082        187 ALAQLIAGTDILVLSDEVYEHIVFDGQGHASVLRHPELRERAFVVSSFGKTYH-VTGWKVGYCVAPAALSAEFRKVH---  262 (386)
T ss_pred             HHHHHHHHCCCEEEECCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEECHHHHHHHHHHH---
T ss_conf             99999998194797112223311389888684448653345444324442457-87510599987899999999999---


Q ss_pred             CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                  +        .+..++++..-+++...|..-  ..-+..+.+.++++.+.+.+.+...+ +.....+  
T Consensus       263 ------------~--------~~~~~~~~~~Q~a~a~~l~~~--~~~~~~~~~~y~~rrd~l~~~L~~~~-~~~~~~~--  317 (386)
T PRK09082        263 ------------Q--------YNTFTVNTPAQLALADYLRAE--PEHYLELPAFYQAKRDRFRAALANSR-FKLLPCE--  317 (386)
T ss_pred             ------------H--------HCCCCCCHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC--
T ss_conf             ------------8--------645787689999999999669--58999999999999999999998679-8884799--


Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC--CCC-CCCE-EEEECCCCCCHHHHHHHHHHH
Q ss_conf             0365317898247310113734567888999998-886282872665--567-6750-568615888999999999999
Q gi|254780153|r  302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS--YRD-APLG-LRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~--~r~-~~~~-~RIg~~g~i~~~dv~~L~~aL  375 (391)
                        +..-+.+.+..  ....+       ...+... +.++|+++--|.  |.. .+.+ +|++.-  .+++.++.-++-|
T Consensus       318 --G~~f~~~~~~~--~~~~~-------~~~f~~~l~~e~gV~v~PG~~F~~~~~~~~~iRl~fa--~~~e~l~ea~~RL  383 (386)
T PRK09082        318 --GTYFQLVDYSA--ISDLN-------DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRFCFA--KQEETLDAAAERL  383 (386)
T ss_pred             --CEEEEEEECCC--CCCCC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEEEC--CCHHHHHHHHHHH
T ss_conf             --25999886034--89989-------9999999998589999827110579999997999968--9999999999998


No 237
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.96  E-value=8.1e-07  Score=62.74  Aligned_cols=276  Identities=19%  Similarity=0.197  Sum_probs=157.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~  120 (391)
                      +.+-.+.+++..   ..|=+...   + ++.+||-.|..++ ++++.+|+.+++...-||.  ++..+..+.++.  ...
T Consensus        52 ~nPT~~~le~~l---a~LE~~~~---a-~~~sSGmaAi~~~-l~~l~~Gd~vv~~~~~Yg~t~~~~~~~~~~~~~--~~~  121 (364)
T PRK07269         52 KNPTRATLEETL---AAIESADY---A-LATSSGMSAIVLA-FSGFPVGSKVVAVRDLYGGSFRWFNQQEKEGRF--HFT  121 (364)
T ss_pred             CCHHHHHHHHHH---HHHHCCCC---E-EECCCHHHHHHHH-HHHHCCCCEEEECCCEECHHHHHHHHHHHCCEE--EEE
T ss_conf             886389999999---99849974---4-5327689999999-998368980897046073799999988743838--999


Q ss_pred             ECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCHH
Q ss_conf             057776578676785565799742024202203203-----502568614886401--1011025455685799970012
Q gi|254780153|r  121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQK  193 (391)
Q Consensus       121 ~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQK  193 (391)
                      ..+...  ... -...+...+++.||-+--.+.+..     .+++++++++|||-+  +-+...|++. ++|+++-|.-|
T Consensus       122 ~~~~~~--~~~-~~i~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~~~Pl~~-GaDivihS~TK  197 (364)
T PRK07269        122 YANTEE--ELI-AAIEEDTDIVYIETPTNPLMVEFDIEKVAQLAHAKGAKVIVDNTFYSPIYQRPLED-GADIVLHSATK  197 (364)
T ss_pred             ECCCHH--HHH-HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC-CCCEEEEECCC
T ss_conf             689859--999-74487853999988999777624779999988756985999788643202673235-86189983550


Q ss_pred             CCCCCCCC--EEEEECHH-HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             00176651--54456778-8876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r  194 VLGGEAGF--GIIILSPA-SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS  270 (391)
Q Consensus       194 ~l~~ppGl--~~v~~s~~-al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~  270 (391)
                      -++|-..+  |.|+.+++ .+++....               .     ...|.   ++.-+..|.+...|      ..+.
T Consensus       198 Yl~GHsDvl~G~vv~~~~~~~~~l~~~---------------~-----~~~G~---~~sP~~a~l~~RGL------~TL~  248 (364)
T PRK07269        198 YLSGHNDVLAGVVVTNDLELYDKLFYN---------------L-----NTTGA---VLSPFDSYLLMRGL------KTLS  248 (364)
T ss_pred             CCCCCCCCEEEEEECCCHHHHHHHHHH---------------H-----HHCCC---CCCHHHHHHHHCCC------CCHH
T ss_conf             014888740168945988999999999---------------9-----85488---78947778886377------7399


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf             99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r  271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD  350 (391)
Q Consensus       271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~  350 (391)
                      -|.+||.+++..+-+|+++++.... |..|..  ...+.|.+.+..           ....+...|.--..+..+|+..+
T Consensus       249 lR~~~~~~nA~~lA~~L~~hp~V~~-V~yPGl--gg~~sf~l~~~~-----------~~~~f~~~l~lf~~a~SlGg~eS  314 (364)
T PRK07269        249 LRMERSTANAQEVVAFLKKSPAVKE-VLYTGK--GGMISFKVADET-----------KIPHILNSLKVFTFAESLGGVES  314 (364)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEE-EECCCC--CCEEEEEECCHH-----------HHHHHHHHCCCCEEECCCCCCCC
T ss_conf             9999999999999999975998349-977997--726799968889-----------99999984863435306677561


Q ss_pred             CC----------------------C-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             67----------------------5-05686158889999999999999999
Q gi|254780153|r  351 AP----------------------L-GLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       351 ~~----------------------~-~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      .-                      . -+|++++    .||++.|++-|+.|+
T Consensus       315 Li~~p~~~~h~~~~~e~r~~~Gi~~~lvRlSvG----lEd~~DLi~DL~qAL  362 (364)
T PRK07269        315 LITYPTTQTHADIPAEVRHSYGLTDDLLRLSIG----IEDARDLIADLRQAL  362 (364)
T ss_pred             EEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHH
T ss_conf             347875345633899999965979295999933----199999999999985


No 238
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.95  E-value=4.7e-06  Score=57.89  Aligned_cols=326  Identities=10%  Similarity=0.025  Sum_probs=164.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCC------HHHHHHHHHHHHHHHHHHCCC---CCCEEEEECCCCHHHHHHHHHHC------C
Q ss_conf             96899998632103653289------889999999999999996889---98579997487348999875320------5
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRC------VLGKERINKAIQLTRKVLEVP---ENYRIAIVPASDTGAVEMALWSL------L   88 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs------~~f~~i~~~~~~~l~~l~~~p---~~y~v~~l~GsgT~~~ea~~~nl------~   88 (391)
                      +|+ |.+++.+++-..+|-+      ++..    +.-+.|.++.--.   .+..-+|+..|||.++|+++.=.      .
T Consensus        82 ~p~-i~~Ai~~Q~~~l~~~~~~~~~~~~~~----~Lae~L~~~~P~~~~~~~l~~Vff~~SGSEAvE~AiKlA~~y~~~r  156 (472)
T PRK08742         82 EPR-IGAAIAAQAGELEQVMLAGFTHEPAV----QLAERLLAIAPRQPGRAPLSKVFYADNGSAGVEVALKMAFHYFHNR  156 (472)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHH----HHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf             899-99999999976666013776771899----9999999857344566776879971866899999999999999953


Q ss_pred             C-CCC-EEEEEECCHHHHHHHHHHHCC--------C---CCEEEEECC------CCCCCC------HHHC-----CCCCC
Q ss_conf             7-897-079970736888887653238--------7---630674057------776578------6767-----85565
Q gi|254780153|r   89 G-YRG-VDVLAWESFGLGWMSDIRQLS--------L---QDVREFTAP------YGSLPD------FSKV-----DFDRD  138 (391)
Q Consensus        89 ~-~~~-~~~~~~g~~~~r~~~~~~~~~--------~---~~~~~~~~~------~g~~~~------~~~~-----~~~~~  138 (391)
                      + ++. .++...++|=++-.....--+        .   ........|      +++...      .+.+     +....
T Consensus       157 g~~~r~~ii~~~~~YHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~  236 (472)
T PRK08742        157 GEHRRTRFIALENGYHGETIGALSVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGE  236 (472)
T ss_pred             CCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99877158730587888727656515883225677787888456589975346788877899999899999999857886


Q ss_pred             EEEEEEEC----CCCEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCE
Q ss_conf             79974202----42022032------035025686148864011011025---4--5568579997001200176-6515
Q gi|254780153|r  139 VVFVWNGT----TSGVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFG  202 (391)
Q Consensus       139 v~~~h~ET----stGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~  202 (391)
                      ++.+-.|.    .-|+..|.      ...+|.++++|+|+|=|.+=.++-   +  +..++.=.+...-|+|++= -=+|
T Consensus       237 iAA~IiEPviqg~GG~~~p~~~yl~~lr~lc~~~giLLI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~aKgltgGy~Pls  316 (472)
T PRK08742        237 ICALILEPRVQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLS  316 (472)
T ss_pred             EEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCCCCCCEEEECHHHCCCCCCEE
T ss_conf             47999715766538705689999999999988729668840330168713445231246779972012121038877707


Q ss_pred             EEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             44567788876541144577831232001123210334786446664488999999998620103189999999977999
Q gi|254780153|r  203 IIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAV  282 (391)
Q Consensus       203 ~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~  282 (391)
                      .++.+++..+......  ..  .            ....++|+.--| ....+..++|+.++++ ++-   ++.++..+.
T Consensus       317 av~~~~eI~~~~~~~~--~~--~------------~~~hg~Ty~GnP-lacAaala~L~i~~~e-~l~---~~~~~~g~~  375 (472)
T PRK08742        317 AVLATQQLYDAFLDDS--RE--R------------AFLHSHSYTGNP-LACAAALATLDIFADD-DVI---ARNQPIAAR  375 (472)
T ss_pred             EEEECHHHHHHHCCCC--CC--C------------CCCCCCCCCCCH-HHHHHHHHHHHHHHHC-CHH---HHHHHHHHH
T ss_conf             8987699997651477--66--6------------513578999998-9999999999999865-599---999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCC
Q ss_conf             99998747971676688200365317-89824731011373456788899999888628287266556767505686158
Q gi|254780153|r  283 LFQFIQENDWIENLAVDETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGV  361 (391)
Q Consensus       283 l~~~i~~~~~~~~~~~~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g  361 (391)
                      +.+.++.... .+.+.+  .|....+ .+.+..+................+...+.+.|+++.     ..|+.+|+.--=
T Consensus       376 l~~~~~~l~~-~p~V~d--VRg~GL~~gvElv~d~~~~~~~~~~~~~~~~~~~~~~~~Gll~r-----~~G~~i~~~PPL  447 (472)
T PRK08742        376 MTQLAAQIGE-HPAVAD--VRQAGMIVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLR-----PLGDVLYWMPPY  447 (472)
T ss_pred             HHHHHHHCCC-CCCEEE--ECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE-----ECCCEEEEECCC
T ss_conf             9999996158-997898--42686499999715876578787778999999999997894898-----549999997994


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8899999999999999999999
Q gi|254780153|r  362 TVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       362 ~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      .++.++|+.+++.|+.++.++=
T Consensus       448 ~it~~eid~~~~~l~~al~ea~  469 (472)
T PRK08742        448 CVDEAQLALLADTTRHAIDEAV  469 (472)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH
T ss_conf             0689999999999999999998


No 239
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=98.95  E-value=3e-06  Score=59.08  Aligned_cols=317  Identities=15%  Similarity=0.099  Sum_probs=166.0

Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHH
Q ss_conf             9999863210365328988999999999999999688998579997487348999875320-578970799707368888
Q gi|254780153|r   27 WSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGW  105 (391)
Q Consensus        27 ~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~  105 (391)
                      .|.+.+....+. +. +    ...++-.+.+.++++.+.   ++. ..|||.|.+.++.-+ +++||.+++-+-.|..- 
T Consensus        16 ~v~~~l~sg~~~-~~-G----~~v~~fE~~~a~~~g~~~---av~-v~sgT~AL~lal~~l~i~~gdeVivp~~tf~at-   84 (375)
T PRK11706         16 YIQEAMSSGKLS-GD-G----GFTRRCQQWLEQRFGCAK---VLL-TPSCTAALEMAALLLDIQPGDEVIMPSYTFVST-   84 (375)
T ss_pred             HHHHHHHCCCCC-CC-C----HHHHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHH-
T ss_conf             999999709876-89-9----799999999999978493---999-678899999999986988939999899664999-


Q ss_pred             HHHHHHCCCCCEEEEE-CCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE--EECCCCCCEEEEEECCHHHHC
Q ss_conf             8765323876306740-5777657867678-----5565799742024202203203--502568614886401101102
Q gi|254780153|r  106 MSDIRQLSLQDVREFT-APYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG--FIPESREGLVICDATSAVFAR  177 (391)
Q Consensus       106 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~--~~~~~~~~llivD~vSs~g~~  177 (391)
                      +.-+...| ......+ .+.+-..+++.++     ..+.+..||.   .|...+..+  .+|+.++..+|-||..++|+.
T Consensus        85 ~~ai~~~G-a~pvfvDid~~t~~id~~~ie~~it~ktkaIi~Vh~---~G~~~d~~~I~~iak~~~i~vIEDaA~a~Gs~  160 (375)
T PRK11706         85 ANAFVLRG-AKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVHY---AGVACEMDTIMALAKKHNLFVVEDAAQGVMST  160 (375)
T ss_pred             HHHHHHCC-CEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECC---CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf             99999839-969999716875776789999870867549999678---89866789999988537908983440036876


Q ss_pred             CCC-----CCCCEEEEECCHHCCCCCCCCEEEEE-CHHHHHHHHHCCCCCCC-CCHHHCCHHHHHHCCCCCCCCCCCCCH
Q ss_conf             545-----56857999700120017665154456-77888765411445778-312320011232103347864466644
Q gi|254780153|r  178 HID-----FNKLDVVTFSAQKVLGGEAGFGIIIL-SPASVERLEKYVPSWPL-PKIFRMVKGGRVMEGLFCGETINTPSL  250 (391)
Q Consensus       178 p~d-----~~~iDv~~a~sQK~l~~ppGl~~v~~-s~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~TP~v  250 (391)
                      -=.     +..+.+.-+.+.|.|.. ..=|+++. +++..+++......+.. ..++.- ...++. ...-|.-+.-..+
T Consensus       161 ~~g~~~Gt~Gd~~~fSF~~~K~itt-GeGG~i~tnd~~l~~~~~~lr~~G~~~~~~~~g-~~~~y~-~~~~G~N~rms~l  237 (375)
T PRK11706        161 YKGRALGTIGHLGCFSFHETKNYTA-GEGGALLINDPALIERAEIIREKGTNRSQFFRG-QVDKYT-WVDIGSSYLPSEL  237 (375)
T ss_pred             CCCEECCCCCCCCCCCCCCCCCCCC-CCCEEEEECCHHHHHHHHHHHHHCCCHHHHHCC-CCCCCE-EEECCCCCCCCHH
T ss_conf             6764457679988858988987877-687499979999999999999828761576557-876641-5404764678889


Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCCCCCC-EEEEEECCCCCCCCCHHHHH
Q ss_conf             88999999998620103189999999977999999987479---716766882003653-17898247310113734567
Q gi|254780153|r  251 LCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND---WIENLAVDETTRSNT-SICMKIVDSDIASLDINSQK  326 (391)
Q Consensus       251 ~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~---~~~~~~~~~~~rS~~-~v~~~~~d~~~~~~~~~~~~  326 (391)
                      .+.. ...+|+.      ++.+.++.++.++..++.+....   ........+...++- ...+.+++..          
T Consensus       238 qAAi-gl~QL~~------ld~~~~~R~~i~~~Y~~~L~~l~~~~~i~~p~~~~~~~~~~~~~~i~~~~~~----------  300 (375)
T PRK11706        238 QAAY-LWAQLEA------ADRINQQRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDIE----------  300 (375)
T ss_pred             HHHH-HHHHHHH------HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEEEEEECCHH----------
T ss_conf             9999-9999998------8999999999999999973051012861045579998330057999956777----------


Q ss_pred             HHHHHHHHHHHHCCEEECCCC---CC-----C--------------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             888999998886282872665---56-----7--------------67505686158889999999999999999
Q gi|254780153|r  327 SFCKSMLSFLEKEEIAYDIGS---YR-----D--------------APLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       327 ~~~~~~~~~l~~~g~~~~~~~---~r-----~--------------~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                       ....+.+.|.++|+......   |.     .              ..+++.+-++..++.+||+..++.|...|
T Consensus       301 -~Rd~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~~p~se~~~~~~lsLP~~~~Lt~~di~~I~~~ik~ff  374 (375)
T PRK11706        301 -DRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTPVEQRTVIATLLNFF  374 (375)
T ss_pred             -HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             -89999999998799832447344249988970877799989999984889887899889999999999999984


No 240
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.95  E-value=3.8e-06  Score=58.44  Aligned_cols=268  Identities=18%  Similarity=0.135  Sum_probs=151.4

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
Q ss_conf             99999999996889985799974873489998753205789707997073688888765323876306740577765786
Q gi|254780153|r   51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDF  130 (391)
Q Consensus        51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~  130 (391)
                      .+.++.+...++.|+...|+.. +|.+..+... ..++.+++..+ ..-.|++..  .+.+..+..+.....      ..
T Consensus        56 ~~l~~~~a~~~g~~~~~~Vl~g-nGs~elI~~l-~~~l~~~~v~i-~~ptfseY~--~a~~~~G~~v~~~~~------~~  124 (339)
T PRK06959         56 DGLAACAARYYGAPDAAHVLPV-AGSQAAIRAL-PALLPRGRVGI-AALAYSEYA--PAFARHGHRVVPLDI------AA  124 (339)
T ss_pred             HHHHHHHHHHCCCCCHHHEEEC-CCHHHHHHHH-HHHHCCCCEEE-ECCCHHHHH--HHHHHCCCEEEECCC------CH
T ss_conf             8999999998199967709966-5799999999-99828886899-452036778--999982985551373------34


Q ss_pred             HHCCCC-CCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECC-HHHHCC-----CCCCCCEEEEECCHHCCCCC
Q ss_conf             767855-657997420242022032035-----025686148864011-011025-----45568579997001200176
Q gi|254780153|r  131 SKVDFD-RDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATS-AVFARH-----IDFNKLDVVTFSAQKVLGGE  198 (391)
Q Consensus       131 ~~~~~~-~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vS-s~g~~p-----~d~~~iDv~~a~sQK~l~~p  198 (391)
                      +.++.. +.+.+|.=..-||...+....     .+..++.++|||=.= .|...+     .+..++ ++.-+--|.+| -
T Consensus       125 ~~l~~~~~~v~l~nPNNPTG~~~~~~~l~~~~~~~~~~~~~lvvDEAy~df~~~~s~~~~~~~~nl-ivlRS~sK~~g-L  202 (339)
T PRK06959        125 DTLPATLTHAIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTGAHASLAAHTHRPGL-VVLRSVGKFFG-L  202 (339)
T ss_pred             HHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCHHHHHHCCCCCE-EEEEECCHHHC-C
T ss_conf             337356898998058071038889999999998554138889997344452665455764169998-99841567645-8


Q ss_pred             CC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             65--1544567788876541144577831232001123210334786446664488999999998620103189999999
Q gi|254780153|r  199 AG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERC  276 (391)
Q Consensus       199 pG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~  276 (391)
                      ||  +|+++.+++.+++......+|                         +-+.....+...+|.   ++.=++...++.
T Consensus       203 aGlRlGy~~a~~~~i~~l~~~~~pw-------------------------~v~~~a~~a~~aal~---d~~~~~~~~~~l  254 (339)
T PRK06959        203 AGVRAGFVLAAPALLAALRDALGAW-------------------------TVSGPARHAVRAAFA---DRAWQAAMRERL  254 (339)
T ss_pred             CCCCEEEEECCHHHHHHHHHHCCCC-------------------------CCCHHHHHHHHHHHC---CHHHHHHHHHHH
T ss_conf             7646364437999999999538998-------------------------977999999999963---999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEE
Q ss_conf             97799999998747971676688200365317898247310113734567888999998886282872665567675056
Q gi|254780153|r  277 NANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLR  356 (391)
Q Consensus       277 ~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~R  356 (391)
                      .+.++.+.+.+...+ +.   .    .+..+.++ ++.+.            .+.+...|.++|+.+..-+   .+.++|
T Consensus       255 ~~~r~~L~~~L~~~g-~~---~----~~~~lF~~-~~~~~------------a~~~~~~L~~~GIlVR~f~---~p~~LR  310 (339)
T PRK06959        255 AADGARLAALLRAHG-FA---V----HATPLFSW-TDDPR------------AAALHAALAARGIWTRYFA---APPSVR  310 (339)
T ss_pred             HHHHHHHHHHHHHCC-CC---C----CCCEEEEE-ECCCC------------HHHHHHHHHHCCEEEEECC---CCCCEE
T ss_conf             999999999999779-98---6----67205898-46889------------9999999984992995889---999889


Q ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86158889999999999999999999998
Q gi|254780153|r  357 VWVGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       357 Ig~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      ||+-+  ++++.++|++||..+....++.
T Consensus       311 i~vp~--~e~e~~RL~~AL~e~l~~~~~~  337 (339)
T PRK06959        311 IGLPA--DEAEWQRLEDALAECVPTLAAA  337 (339)
T ss_pred             EECCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_conf             86789--9999999999999999986642


No 241
>PRK08175 aminotransferase; Validated
Probab=98.94  E-value=5.1e-06  Score=57.63  Aligned_cols=313  Identities=12%  Similarity=0.078  Sum_probs=166.5

Q ss_pred             HHHHHHHHHHHCC-CCCCC---CHHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             6899998632103-65328---988999999999999999688998--57999748734899987532057897079970
Q gi|254780153|r   25 PGWSLGILEGALL-GRSHR---CVLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSLLGYRGVDVLAW   98 (391)
Q Consensus        25 p~~v~~~~~~~~l-~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~   98 (391)
                      |..+++++.+.+- +..|+   +.-..++-+.+-+.+++-++..-+  .+|+ ++.|++.++..+++.++++||.+++..
T Consensus        44 p~~i~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~ii-vt~Ga~~al~~~~~al~~pGD~Vli~~  122 (395)
T PRK08175         44 PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAI-VTIGSKEGLAHLMLATLDHGDTVLVPN  122 (395)
T ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE-ECCCHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             9999999999976999888899757499999999999998689878788399-888879999999997279989899778


Q ss_pred             CCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEE-----EECCCCCCEE
Q ss_conf             73688888765323876306740--577765786767-----85565799742024202203203-----5025686148
Q gi|254780153|r   99 ESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLV  166 (391)
Q Consensus        99 g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~ll  166 (391)
                      =.|...... +.. .+..+..+.  ...+...++++.     +..+.+.++.=..-||...+..+     .+|..++.++
T Consensus       123 P~Yp~y~~~-~~~-~g~~~~~vpl~~~~~~~~~le~~~~~~~~ktk~iiln~P~NPTG~v~s~e~l~~i~~~a~~~~i~v  200 (395)
T PRK08175        123 PSYPIHIYG-AVI-AGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLV  200 (395)
T ss_pred             CCCCCHHHH-HHH-HCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEE
T ss_conf             774014999-998-478407850457776044199999726877459998899998887579999999999888669489


Q ss_pred             EEEECCHHH---HCC------CC-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf             864011011---025------45-56857999700120017665--1544567788876541144577831232001123
Q gi|254780153|r  167 ICDATSAVF---ARH------ID-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR  234 (391)
Q Consensus       167 ivD~vSs~g---~~p------~d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~  234 (391)
                      |.|-+=+-.   +.+      ++ ....-+.+.|.-|.++ -||  +|.++.+++.+++....+.            +  
T Consensus       201 isDEiY~~l~~d~~~~~s~~~~~~~~~~~i~~~S~SK~f~-~~G~RiG~ii~~~~~i~~~~~~~~------------~--  265 (395)
T PRK08175        201 VHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYN-MAGWRIGFMVGNPELVSALARIKS------------Y--  265 (395)
T ss_pred             EECCCHHHHCCCCCCCCCHHHCCCCCCCEEEEEECCCCCC-CCCCCEEEEECCHHHHHHHHHHHH------------H--
T ss_conf             8235314210288778685447456465489950322347-775456999649999999999998------------7--


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r  235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                              ....+++. .-++...+|+.-  +.-++.+.+.++++.+.+.+.+...+ +...  .|+  +..-+-..+++
T Consensus       266 --------~~~~~~~~-~Q~aa~~al~~~--~~~~~~~~~~~~~rr~~l~~~L~~~g-~~~~--~P~--G~~y~w~~~~~  329 (395)
T PRK08175        266 --------HDYGTFTP-LQVAAIAALEGD--QQCVRDIAEQYKRRRDVLVKGLHEAG-WMVE--MPK--ASMYVWAKIPE  329 (395)
T ss_pred             --------CCCCCCHH-HHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEE--CCC--EEEEEEEECCC
T ss_conf             --------04687679-999999998598--99999999999999999999998759-8540--689--66699688888


Q ss_pred             CCCCCCCHHHHHHHHHHHH-HHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             3101137345678889999-98886282872665-5676750-568615888999999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSML-SFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      +.. ..+       ..++. .++.+.|+++--|. +...|.+ +|++..  .+.+.++.-++.|+.+|+.
T Consensus       330 ~~~-~~~-------~~ef~~~ll~e~~V~v~PG~~Fg~~g~~~vRl~~~--~~~~~l~eal~Ri~~~~~a  389 (395)
T PRK08175        330 PYA-AMG-------SLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAVRGIKAMFRA  389 (395)
T ss_pred             CCC-CCC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
T ss_conf             767-899-------89999999984989997773327799986999972--8999999999999999986


No 242
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.94  E-value=3.1e-07  Score=65.38  Aligned_cols=321  Identities=13%  Similarity=0.088  Sum_probs=155.8

Q ss_pred             CHHHHHHHHHHHCCC-C-CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf             968999986321036-5-3289889999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r   24 RPGWSLGILEGALLG-R-SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~-~-sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g   99 (391)
                      +|+ |.+++.+++=. . ++...+   ..-+.-+.|.+++  |.-.+|.| ..|||.+.|+++.=-.  ..+.+++...|
T Consensus        71 ~p~-v~~Ai~~q~~~g~~~~~~~~---~~~~lAe~l~~~~--p~~~~v~F-~~sGsEA~e~AiklAR~~tgr~kii~~~~  143 (429)
T PRK12389         71 HPH-ITKAIQTAAENGVLYGTPTE---LEIEFAKMLKEAI--PSLEKVRF-VNSGTEAVMTTIRVARAYTGRTKIIKFAG  143 (429)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHC--CCCCEEEE-ECCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             899-99999999823885779989---9999999999857--88766986-26842899999999998349996541145


Q ss_pred             CHHHHH--HHHHH-----HCCCCC---------EEEEECCCCCCCCHHH-CC-CCCCEEEEEEECC---CCEEECCE---
Q ss_conf             368888--87653-----238763---------0674057776578676-78-5565799742024---20220320---
Q gi|254780153|r  100 SFGLGW--MSDIR-----QLSLQD---------VREFTAPYGSLPDFSK-VD-FDRDVVFVWNGTT---SGVCVPDV---  155 (391)
Q Consensus       100 ~~~~r~--~~~~~-----~~~~~~---------~~~~~~~~g~~~~~~~-~~-~~~~v~~~h~ETs---tGv~~~~~---  155 (391)
                      .|=++.  .....     ..+..+         ......|++....+++ ++ ...+++.+-.|-.   .|+..|..   
T Consensus       144 ~yHG~t~~~l~~~~~~~~~~~~p~~~g~p~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavI~EPi~g~~G~i~p~~~yl  223 (429)
T PRK12389        144 CYHGHSDLVLVAAGSGPSTLGTPDSAGVPESIAQEVITVPFNDIESYKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFL  223 (429)
T ss_pred             CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCHHHH
T ss_conf             75998543223136885346898767887655565253078999999999984589668999602236788016998999


Q ss_pred             ---EEECCCCCCEEEEEECCH-HHHCCC---CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             ---350256861488640110-110254---5568579997001200176651544567788876541144577831232
Q gi|254780153|r  156 ---GFIPESREGLVICDATSA-VFARHI---DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR  228 (391)
Q Consensus       156 ---~~~~~~~~~llivD~vSs-~g~~p~---d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~  228 (391)
                         +.+|.++++|+|+|=|.+ |..-..   +..++.=.+...-|+|++===++.++.+++..+.....   .+      
T Consensus       224 ~~lr~lc~~~giLLI~DEV~TGfR~g~~~a~~~~gV~PDi~t~gK~lggG~Pi~av~g~~eim~~~~~~---g~------  294 (429)
T PRK12389        224 EEVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVIPDLTALGKIIGGGLPIGAYGGRQDIMEQVAPL---GP------  294 (429)
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHCCCCCCCHHHEHHHCCCCCCEEEEEEHHHHHHHHCCC---CC------
T ss_conf             999999997198899965510315666707655389997100103227986448876779999873157---98------


Q ss_pred             CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf             00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r  229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI  308 (391)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v  308 (391)
                                ...++|++--|+ ...+...+|+.+++++=+++..++-+...+.+.+..++.+...   .....++...+
T Consensus       295 ----------~~~~gTf~gnpl-a~AAalA~L~~l~~~~l~~~~~~~G~~l~~gl~~l~~~~~~~~---~v~~~g~~~~i  360 (429)
T PRK12389        295 ----------AYQAGTMAGNPA-SMAAGIACLEVLQQEGVYEKLDELGAMLEEGILKLAEKHNITI---TINRLKGALTV  360 (429)
T ss_pred             ----------CEECCCCCCCHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCE---EEEECCCEEEE
T ss_conf             ----------502588886889-9999999999997168999999999999999999998779987---99414856899


Q ss_pred             EEEECCCCCCCCCHH--HHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             898247310113734--56788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  309 CMKIVDSDIASLDIN--SQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       309 ~~~~~d~~~~~~~~~--~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      .  +.+....+....  .+......+...+.++|+.+...++    ..+.++  -.++++||+..++++|.+|+++
T Consensus       361 ~--f~~~~v~~~~~~~~~~~~~~~~~~~~ml~~Gv~~~p~~~----~~~~ls--~~hTe~dId~~l~a~d~al~~l  428 (429)
T PRK12389        361 Y--FTDEKVTDYDQAERSDGEAFGKFFKLMLNQGINLAPSKY----EAWFLT--TEHTEEDIEETIKAVDRAFAQM  428 (429)
T ss_pred             E--ECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC----CCCCCC--CCCCHHHHHHHHHHHHHHHHHH
T ss_conf             9--458988898998615799999999999978864568677----774164--6789999999999999999975


No 243
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.91  E-value=1.2e-06  Score=61.61  Aligned_cols=289  Identities=19%  Similarity=0.162  Sum_probs=162.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCE
Q ss_conf             3289889999999999999996889985799974873489998753205789707997073688--88876532387630
Q gi|254780153|r   40 SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDV  117 (391)
Q Consensus        40 sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~  117 (391)
                      +-++.+-...+++....|.   +...   + +...||-+|+..+++.++++||.++.....||.  +......+..+.++
T Consensus        58 ~R~~nPT~~~lE~~~a~LE---g~~~---~-~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~  130 (396)
T COG0626          58 SRTGNPTRDALEEALAELE---GGED---A-FAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEV  130 (396)
T ss_pred             CCCCCCCHHHHHHHHHHHH---CCCC---E-EEECCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEE
T ss_conf             0578963799999999860---9883---7-9953739999999998357999898457764329999999998568599


Q ss_pred             EEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEECCH--HHHCCCCCCCCEEEEEC
Q ss_conf             674057776578676785565799742024202203203-----50256861488640110--11025455685799970
Q gi|254780153|r  118 REFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDATSA--VFARHIDFNKLDVVTFS  190 (391)
Q Consensus       118 ~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs--~g~~p~d~~~iDv~~a~  190 (391)
                      ........... .+.+. .+..-+++.||-+--.+.+..     .+++.+++++|||-+=+  +.-.|++. ++|+++-|
T Consensus       131 ~~~d~~~~~~~-~~~~~-~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~-GaDIVvhS  207 (396)
T COG0626         131 TFVDPGDDEAL-EAAIK-EPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLEL-GADIVVHS  207 (396)
T ss_pred             EEECCCCHHHH-HHHHC-CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEE
T ss_conf             99789975889-98744-66834999967999630555699999999864988999889662201685550-99789985


Q ss_pred             CHHCCCCCCCC--EEEEE-CHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             01200176651--54456-7788876541144577831232001123210334786446664488999999998620103
Q gi|254780153|r  191 AQKVLGGEAGF--GIIIL-SPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG  267 (391)
Q Consensus       191 sQK~l~~ppGl--~~v~~-s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g  267 (391)
                      .-|=|+|-.=+  |+|+. +++..++...           .+        +...|.   .+.-+.-|.+...|      .
T Consensus       208 aTKyl~GHsDvl~G~v~~~~~~~~~~~~~-----------~~--------~~~~G~---~l~p~dA~l~lRGl------k  259 (396)
T COG0626         208 ATKYLGGHSDVLGGVVLTPNEELYELLFF-----------AQ--------RANTGA---VLSPFDAWLLLRGL------R  259 (396)
T ss_pred             CCCCCCCCCCEEEEEEECCHHHHHHHHHH-----------HH--------HHHCCC---CCCHHHHHHHHHCC------C
T ss_conf             43333677350416884486899999999-----------98--------865278---78879999998171------5


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC------C--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf             1899999999779999999874797167668820------0--------3653178982473101137345678889999
Q gi|254780153|r  268 GLSACVERCNANAAVLFQFIQENDWIENLAVDET------T--------RSNTSICMKIVDSDIASLDINSQKSFCKSML  333 (391)
Q Consensus       268 Gl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~------~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~  333 (391)
                      .+.-|.+||++++..+-+|++..+..... -.|.      +        .....+.|.+.+.           ...+.+.
T Consensus       260 TL~~Rm~~~~~nA~~IA~~L~~~p~V~~V-~yPgl~shp~he~~krq~~g~gg~~Sf~l~~~-----------~~~~~f~  327 (396)
T COG0626         260 TLALRMERHNENALKIAEFLADHPKVKKV-YYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-----------EAAKKFL  327 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHCCCCCEEEEEEECCH-----------HHHHHHH
T ss_conf             39999999999899999998629976899-89999889768999974579860899996785-----------8999999


Q ss_pred             HHHHHCCEEECCCCCCCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             988862828726655676-----------------------7505686158889999999999999999999
Q gi|254780153|r  334 SFLEKEEIAYDIGSYRDA-----------------------PLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       334 ~~l~~~g~~~~~~~~r~~-----------------------~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      ..|..-..+..+||+.+.                       +.-+|++++    .||++.|++-|+.++...
T Consensus       328 ~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG----lEd~eDLiaDl~~Al~~~  395 (396)
T COG0626         328 DSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG----LEDVEDLIADLEQALAKA  395 (396)
T ss_pred             HHCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHH
T ss_conf             72782378326877440001665567554898789865999982899956----799899999999999852


No 244
>PRK06942 glutamate-1-semialdehyde 2,1-aminomutase; Validated
Probab=98.91  E-value=6.7e-07  Score=63.26  Aligned_cols=319  Identities=13%  Similarity=0.053  Sum_probs=159.5

Q ss_pred             CHHHHHHHHHHHCCC-C--CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEE
Q ss_conf             968999986321036-5--32898899999999999999968899857999748734899987532057-89-7079970
Q gi|254780153|r   24 RPGWSLGILEGALLG-R--SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAW   98 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~-~--sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~   98 (391)
                      +|+ |.+++++++-. .  ++-++.    .-+.-+.|.+++  |.-..|+| ..|||.+.|+++.=--. .+ +.++...
T Consensus        68 ~p~-v~~Av~~q~~~~~~~~~~~~~----~~~lAe~L~~~~--P~~~~v~f-~~SGsEA~e~AiklAR~~tgr~~ii~~~  139 (425)
T PRK06942         68 HPE-VLRAVQRVLADGFSFGAPTEA----EIEIAEEICKLV--PSIEQVRM-VSSGTEATMSALRLARGFTGRSRIVKFE  139 (425)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCHH----HHHHHHHHHHHC--CCCCEEEE-ECCHHHHHHHHHHHHCCCCCCCCCCEEC
T ss_conf             799-999999999857857899789----999999999858--89885987-3887999999999961034798653123


Q ss_pred             CCHHHHHHHHHHHCC-------CCCE---------EEEECCCCCCCCHHH-C-CCCCCEEEEEEECCCC---EEECC---
Q ss_conf             736888887653238-------7630---------674057776578676-7-8556579974202420---22032---
Q gi|254780153|r   99 ESFGLGWMSDIRQLS-------LQDV---------REFTAPYGSLPDFSK-V-DFDRDVVFVWNGTTSG---VCVPD---  154 (391)
Q Consensus        99 g~~~~r~~~~~~~~~-------~~~~---------~~~~~~~g~~~~~~~-~-~~~~~v~~~h~ETstG---v~~~~---  154 (391)
                      |+|=++.-..+...+       ....         .....+++....+++ + .....++.+-.|...|   +..|.   
T Consensus       140 g~YHG~~~~~~~~~~~~~~~~~~p~~~g~p~~~~~~~~~~~~nd~~~l~~~~~~~~~~iAAvI~EPi~g~~G~i~p~~~y  219 (425)
T PRK06942        140 GCYHGHADSLLVKAGSGLLTFGNPTSAGVPADVAKHTTVLEYNNVAALEEAFAAFGGEIAAVIVEPVAGNMNLVRGTPEF  219 (425)
T ss_pred             CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHH
T ss_conf             45147741021213787655588865688765457664667676888999998438966899955644778750289899


Q ss_pred             ---EEEECCCCCCEEEEEECCH-HHHCCC---CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf             ---0350256861488640110-110254---556857999700120017665154456778887654114457783123
Q gi|254780153|r  155 ---VGFIPESREGLVICDATSA-VFARHI---DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIF  227 (391)
Q Consensus       155 ---~~~~~~~~~~llivD~vSs-~g~~p~---d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~  227 (391)
                         .+.+|+++++++|+|=|.+ |-.-.+   +..++.-.+...-|+|++==-++.++.+++..+...   +..      
T Consensus       220 l~~lr~lc~~~gilLI~DEV~TGfR~g~~~a~~~~gv~PDi~t~gK~iggG~Pi~Av~g~~eim~~~~---~~g------  290 (425)
T PRK06942        220 LNALRALCTKHGAVLIFDEVMCGFRVALGGAQQHYGITPDLTCLGKVIGGGMPAAAFGGRRDIMAHLA---PLG------  290 (425)
T ss_pred             HHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEHHHCCCCCCCEEEEEHHHHHHHCC---CCC------
T ss_conf             99999986137838999746257406765387621899879987100579887021025999997506---788------


Q ss_pred             HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf             20011232103347864466644889999999986201031899999999779999999874797167668820036531
Q gi|254780153|r  228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTS  307 (391)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~  307 (391)
                                ....+.|++--|+ ...+....|+.+++++=+++..++-++..+-+.+.++..+. ...+  ...-|...
T Consensus       291 ----------~~~h~gTf~gnp~-a~AAalatL~~~~~~~~~~~~~~~g~~L~~gl~~~~~~~g~-~~~~--~g~gs~f~  356 (425)
T PRK06942        291 ----------GVYQAGTLSGNPI-AVAAGLKTLRLIQAPGFYDALAAQTRRLADGLAAEARAAGV-PFAA--DSIGGMFG  356 (425)
T ss_pred             ----------CCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CEEE--EEECCEEE
T ss_conf             ----------8722789987879-99999999999845679999999999999999999997799-8899--65376479


Q ss_pred             EEEEECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             789824731011373--456788899999888628287266556767505686-158889999999999999999999
Q gi|254780153|r  308 ICMKIVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       308 v~~~~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      +.|  .+....+...  ..+......+...+.++|+.+.-       .++.-| +--+.+++||+..+++.|.+|+++
T Consensus       357 ~~f--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gv~~~p-------~~~~~~f~s~aHt~~did~~l~a~~~a~~~l  425 (425)
T PRK06942        357 LYF--TERVPTSFAEVTKSDVERFNRFFHLMLDEGVYFAP-------SAYEAGFVSSTHDDAVLDATLDAARRAFAAL  425 (425)
T ss_pred             EEE--CCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCC-------CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             986--89999999999855499999999999978967798-------5242176230379999999999999999739


No 245
>PRK08960 hypothetical protein; Provisional
Probab=98.90  E-value=7e-06  Score=56.77  Aligned_cols=323  Identities=14%  Similarity=0.072  Sum_probs=165.7

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCC
Q ss_conf             8868887768-968999986321036-532898--8999999999999999688998-5799974873489998753205
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLL   88 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~   88 (391)
                      .+|+-|=... +|..+++++...+-. .+|=++  =..++-+.+.+.+++-++.+-+ -+| +++.|++.++..++.-++
T Consensus        35 i~l~~G~pdf~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~d~I-~vt~G~~~al~~~~~~l~  113 (387)
T PRK08960         35 IHLEIGEPDFTTAAPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGLDVDPERI-LVTPGGSGALLLASSLLV  113 (387)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHE-EECCCHHHHHHHHHHHHC
T ss_conf             7889948999889999999999985389988998772999999999999985899984328-980866999999999956


Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----E
Q ss_conf             7897079970736888887653238763067-4057776578676785-----565799742024202203203-----5
Q gi|254780153|r   89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----F  157 (391)
Q Consensus        89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~  157 (391)
                      ++||.+++-.=.|..-. ..+...++..+.+ ...+.+..++++.++.     .+.+.++.-..-||...+..+     .
T Consensus       114 ~pGD~Vlv~~P~Yp~~~-~~~~~~~~~~~~vp~~~~~~~~~~~~~le~~~~~~~~~iil~nP~NPTG~v~s~~~l~~l~~  192 (387)
T PRK08960        114 DPGKHWLLADPGYPCNR-HFLRLVEGAAQLVPVGPDTRYQLTPALVERHWDSDSVGALVASPANPTGTLLSRDELAALSQ  192 (387)
T ss_pred             CCCCEEEEECCCCCCHH-HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf             99987998178765528-99998537449997575447788999999727878729997689898863146899999999


Q ss_pred             ECCCCCCEEEEEECCHHHHCC------CCCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             025686148864011011025------4556857999700120017665--15445677888765411445778312320
Q gi|254780153|r  158 IPESREGLVICDATSAVFARH------IDFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRM  229 (391)
Q Consensus       158 ~~~~~~~llivD~vSs~g~~p------~d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~  229 (391)
                      +|.+++.++|.|-+=+-...+      +...+--+++.|.-|.++. ||  +|.++..++.+++......          
T Consensus       193 ~a~~~~~~vI~DEiY~~l~~~~~~~s~~~~~~~~i~i~S~SK~~~~-~G~RiG~~v~p~~~i~~~~~~~~----------  261 (387)
T PRK08960        193 ALKARGGHLVVDEIYHGLTYGVDAASVLEVDDSAFVLNSFSKYFGM-TGWRLGWLVAPPAAVPELEKLAQ----------  261 (387)
T ss_pred             HHHHCCCEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC-CCCEEEEEEECHHHHHHHHHHHH----------
T ss_conf             8762397799844614412589865311367877999506432557-76305899988999999999998----------


Q ss_pred             CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf             01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r  230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC  309 (391)
Q Consensus       230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~  309 (391)
                                   .+...++...-++...+++. ....-++.+.++++++.+.+.+.+...++....  .|+  +..-+-
T Consensus       262 -------------~~~~~~~~~~Q~aa~~al~~-~~~~~~~~~~~~~~~rrd~l~~~l~~~~~~~~~--~P~--G~~y~w  323 (387)
T PRK08960        262 -------------NLYISASSMAQHAALACFEP-ETIAILEARRAEFQRRRDFLLPALRELGFGIAV--EPQ--GAFYLY  323 (387)
T ss_pred             -------------HCCCCCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCC--EEEEEE
T ss_conf             -------------54377987999999999621-559999999999999999999999975996045--898--666997


Q ss_pred             EEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC--CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9824731011373456788899999-8886282872665--567675-05686158889999999999999999
Q gi|254780153|r  310 MKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS--YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       310 ~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~--~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      +.++...   .+       ...+.. ++.+.|+++--|.  +...+. -+|++...  +.++++.-++-|..++
T Consensus       324 ~~~~~~~---~d-------~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~~Rls~~~--~~~~l~eal~RL~~~L  385 (387)
T PRK08960        324 ADISAFG---GD-------AFAFCRHFLETEHVAFTPGLDFGRHQAGHHVRFAYTQ--SLPRLQEAVERIARGL  385 (387)
T ss_pred             EECCCCC---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHH
T ss_conf             8888889---99-------9999999998699999747220899999989999769--9999999999999996


No 246
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.89  E-value=8.1e-07  Score=62.72  Aligned_cols=313  Identities=15%  Similarity=0.132  Sum_probs=175.9

Q ss_pred             HHHHHHHHHCCCC------CCC---CHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-----CC
Q ss_conf             9999863210365------328---988999-99999999999968899857999748734899987532057-----89
Q gi|254780153|r   27 WSLGILEGALLGR------SHR---CVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-----YR   91 (391)
Q Consensus        27 ~v~~~~~~~~l~~------sHR---s~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-----~~   91 (391)
                      .|+++++..+-..      .+|   +.++.+ +=.-+.++.+++|+...   +-+-+-||+.+.-|+.+.++.     ||
T Consensus        66 aV~ea~gS~ltnKYAEGyPG~RYY~Gce~vD~iE~lai~rak~LF~a~~---aNVQP~SGs~AN~avy~All~~~v~~Pg  142 (493)
T PRK13580         66 AVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDAIEWEAAEHARELFGAEH---AYVQPHSGADANLVAFWAILAHKVEAPA  142 (493)
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf             9999856731012458899863237757799999999999999838985---0327787607789999998600024864


Q ss_pred             --------------------------CEEEEE----ECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCC-----C
Q ss_conf             --------------------------707997----073688888765323876306740-5777657867678-----5
Q gi|254780153|r   92 --------------------------GVDVLA----WESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVD-----F  135 (391)
Q Consensus        92 --------------------------~~~~~~----~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~-----~  135 (391)
                                                +.++..    .|..+.....-+.... .++..+. .+.....|.+++.     .
T Consensus       143 l~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~~~n~sg~~-~~~~~Y~vd~et~~IDyD~~~~~A~~~  221 (493)
T PRK13580        143 LSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGFRPNISGKM-FRQRSYGVDPDTGLLDYDEIAALAREF  221 (493)
T ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEE-EEEEECCCCCCCCCCCHHHHHHHHHHC
T ss_conf             2233433323233012222202467886870588878663369965634226-887875366334840899999999974


Q ss_pred             CCCEEEEEEECCCCEEEC--CEEEECCCCCCEEEEEECCHHH--H---CC---CCCCCCEEEEECCHHCCCCCCCCEEEE
Q ss_conf             565799742024202203--2035025686148864011011--0---25---455685799970012001766515445
Q gi|254780153|r  136 DRDVVFVWNGTTSGVCVP--DVGFIPESREGLVICDATSAVF--A---RH---IDFNKLDVVTFSAQKVLGGEAGFGIII  205 (391)
Q Consensus       136 ~~~v~~~h~ETstGv~~~--~~~~~~~~~~~llivD~vSs~g--~---~p---~d~~~iDv~~a~sQK~l~~ppGl~~v~  205 (391)
                      .+.+.++-. ++.--..|  ..+.++.+.++.+++|+.--.|  +   .|   =++...|++.++.+|-|-||-| +++.
T Consensus       222 kPKlII~G~-SaYpr~idf~~freIAdeVGA~LmaDiAHiaGLVA~g~~~~h~sP~~~ADvVTtTTHKTLrGPRG-GiIl  299 (493)
T PRK13580        222 KPLVLVAGY-SAYPRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVL  299 (493)
T ss_pred             CCCEEEECC-CCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CEEE
T ss_conf             998899776-24656448799999999719789810566767764254568999513351575123445678885-0688


Q ss_pred             ECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             67788876541144577831232001123210334786446664488999999998620103189999999977999999
Q gi|254780153|r  206 LSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQ  285 (391)
Q Consensus       206 ~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~  285 (391)
                      .+++..++.....                       ..+-.-|-.+.|.+...++.+.... ......++..++++.+-+
T Consensus       300 ~~~e~~~~Id~av-----------------------Pg~QGGP~~h~IAakAvaf~EA~~p-eFk~Y~~qVv~NAkaLA~  355 (493)
T PRK13580        300 AKKEYAEAVDKGC-----------------------PLVLGGPLPHVMAAKAVALAEARTP-DFKKYAHRVVDNARALAE  355 (493)
T ss_pred             ECHHHHHHHCCCC-----------------------CCCCCCHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHH
T ss_conf             4647787651038-----------------------7546872776999999999997277-789999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC------CCCCCEEEEEC
Q ss_conf             987479716766882003653178982473101137345678889999988862828726655------67675056861
Q gi|254780153|r  286 FIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY------RDAPLGLRVWV  359 (391)
Q Consensus       286 ~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------r~~~~~~RIg~  359 (391)
                      .+...+ +....  -..-+. .+.+.+..-.+.       +   +..-..|.+.|+.+.-+.-      ...+.|+|||+
T Consensus       356 ~L~~~G-~~vvs--GGTdnH-lvLvDl~~~g~t-------G---~~ae~~Le~~gI~vNKN~iP~D~~~p~~~SGIRiGt  421 (493)
T PRK13580        356 GFLKRG-ARLVT--GGTDNH-LLLIDVTSFGLT-------G---RQAEDALLDVGIVTNRNSIPSDPNGAWYTSGIRLGT  421 (493)
T ss_pred             HHHHCC-CEEEC--CCCCCC-EEEEECCCCCCC-------H---HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEECC
T ss_conf             999889-94852--888877-588856778998-------8---999999987793871688989998898886411166


Q ss_pred             CC----CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             58----8899999999999999999999
Q gi|254780153|r  360 GV----TVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       360 ~g----~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      -.    ...++|+....++|..+++..+
T Consensus       422 pa~TtRGm~e~em~~ia~~I~~~l~~~~  449 (493)
T PRK13580        422 PALTTLGMGSDEMDEVAELIVKVLRNTT  449 (493)
T ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             6676189998999999999999995524


No 247
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.89  E-value=4.3e-06  Score=58.10  Aligned_cols=260  Identities=18%  Similarity=0.154  Sum_probs=147.0

Q ss_pred             HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
Q ss_conf             99999999968899857999748734899987532057897079970736888887653238763067405777657867
Q gi|254780153|r   52 KAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFS  131 (391)
Q Consensus        52 ~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~  131 (391)
                      ..++.++..++.++   +++.. |++..+...+. +.. ++.+++..=.|++.  ..+.+..+..+....  ..   +..
T Consensus        53 ~L~~a~a~~~g~~~---vl~gn-Gs~e~I~ll~~-l~~-~~~v~i~~PtfseY--~~a~~~~g~~v~~~~--~~---~~~  119 (330)
T PRK05664         53 GLEAAARAYYGAPQ---LLPVA-GSQAAIQALPR-LRA-PGRVGVLSPCYAEH--AHAWRRAGHQVRELD--EA---EVE  119 (330)
T ss_pred             HHHHHHHHHCCCCC---EEEEC-CHHHHHHHHHH-HHC-CCEEEECCCCHHHH--HHHHHHCCCEEEECC--HH---HHH
T ss_conf             99999998719973---99941-69999999999-748-99468848887999--999998699889768--77---776


Q ss_pred             H-CCCCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECCHHHH-CC-------CCCCCCEEEEECCHHCCCC
Q ss_conf             6-7855657997420242022032035-----0256861488640110110-25-------4556857999700120017
Q gi|254780153|r  132 K-VDFDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATSAVFA-RH-------IDFNKLDVVTFSAQKVLGG  197 (391)
Q Consensus       132 ~-~~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs~g~-~p-------~d~~~iDv~~a~sQK~l~~  197 (391)
                      . .+..+.+.+|.=..-||...+..+.     .+..++.++|||=.  +.- .|       .+..++ ++.-+--|.+| 
T Consensus       120 ~~~~~~d~v~l~nPNNPTG~~~~~~~l~~~~~~~~~~~~~lvvDEa--y~d~~~~~s~~~~~~~~nl-ivlrS~sK~~g-  195 (330)
T PRK05664        120 AALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEA--FMDNTPQHSLAACAHRPGL-IVLRSFGKFFG-  195 (330)
T ss_pred             HCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECH--HHCCCCCHHHHHHCCCCCE-EEEEECCHHHC-
T ss_conf             2267889899827928866898999999999986531988999753--2116873114663358998-99840447426-


Q ss_pred             CCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             6651--54456778887654114457783123200112321033478644666448899999999862010318999999
Q gi|254780153|r  198 EAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVER  275 (391)
Q Consensus       198 ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r  275 (391)
                      -||+  |+++.+++.+++......+|                         .-++....+...+|+   ++.-+....++
T Consensus       196 laGlRlGy~~a~~~~i~~l~~~~~pw-------------------------~Vn~~a~~aa~aaL~---d~~~~~~~~~~  247 (330)
T PRK05664        196 LAGARLGFVLAEPALLRALAELLGPW-------------------------TVSGPTRWLAQAALA---DTPWQRQQRER  247 (330)
T ss_pred             CCCCCCEEHCCCHHHHHHHHHHCCCC-------------------------CCCHHHHHHHHHHHC---CHHHHHHHHHH
T ss_conf             85403020108999999999844999-------------------------860999999999963---99999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEE
Q ss_conf             99779999999874797167668820036531789824731011373456788899999888628287266556767505
Q gi|254780153|r  276 CNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGL  355 (391)
Q Consensus       276 ~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~  355 (391)
                      ..+.++.+.+.+...+ +.+.      .|..+..+. ..+.            .+.+...|.++|+++..   -....++
T Consensus       248 l~~er~~l~~~L~~~g-~~~~------~s~anF~l~-~~~~------------a~~l~~~L~~~GIlVR~---~~~~~~L  304 (330)
T PRK05664        248 LLAASQRLAALLRRHG-LPPA------GGCALFQWV-RTED------------AAALHEFLARRGILTRL---FEQPPSL  304 (330)
T ss_pred             HHHHHHHHHHHHHHCC-CEEC------CCCCEEEEE-ECCC------------HHHHHHHHHHCCEEEEE---CCCCCCE
T ss_conf             9999999999999788-8427------995369996-2599------------99999999969949978---8999977


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             686158889999999999999999999
Q gi|254780153|r  356 RVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       356 RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      |||...  +++|-.+|.+||. ++.++
T Consensus       305 Ri~i~~--~e~~~~rL~~AL~-~~~~~  328 (330)
T PRK05664        305 RFGLPA--DEADWARLDQALL-AYRKE  328 (330)
T ss_pred             EEECCC--CHHHHHHHHHHHH-HHHHH
T ss_conf             985798--8788999999999-99973


No 248
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=98.89  E-value=2.2e-06  Score=59.92  Aligned_cols=296  Identities=15%  Similarity=0.025  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf             68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r   25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG  104 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r  104 (391)
                      |..+.+++...+- ..||=|+-.  ..+.++.+.+.++++.+ .|++ ..|++..+..++. .+.+++.++ +.=.|+..
T Consensus        35 p~~v~~ai~~~~~-~~~rYPd~~--~~~Lr~~iA~~~gv~~~-~I~v-gnGs~Eli~~i~~-~~~~~~~~i-~~Ptf~~Y  107 (356)
T PRK08056         35 PVSVKRALIDNLD-CIERYPDAD--YFHLHQALARHHQVPAS-WILA-GNGETESIFTVAS-GLKPRRAMI-VTPGFAEY  107 (356)
T ss_pred             CHHHHHHHHHHHH-HHHCCCCCC--HHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHH-HCCCCCEEE-ECCCHHHH
T ss_conf             9999999997475-774199824--89999999998298889-9887-5878999999998-548996699-78874999


Q ss_pred             HHHHHHHCCCCCEEEEECC--CCCCCCH---HHCCCC-CCEEEEEEECCCCEEECCEE---E--ECCCCCCEEEEEECC-
Q ss_conf             8876532387630674057--7765786---767855-65799742024202203203---5--025686148864011-
Q gi|254780153|r  105 WMSDIRQLSLQDVREFTAP--YGSLPDF---SKVDFD-RDVVFVWNGTTSGVCVPDVG---F--IPESREGLVICDATS-  172 (391)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~--~g~~~~~---~~~~~~-~~v~~~h~ETstGv~~~~~~---~--~~~~~~~llivD~vS-  172 (391)
                        ..+++..+..+......  .+...+.   +.++.. +.+.+|.=..-||...+...   +  .+..++.++|+|=.= 
T Consensus       108 --~~~a~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY~  185 (356)
T PRK08056        108 --GRALAQVGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIADRCKSLNINLILDEAFI  185 (356)
T ss_pred             --HHHHHHCCCEEEEEECCHHHCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHH
T ss_conf             --999998597699986773315897699997336788889981899998875899999999987240493999744557


Q ss_pred             HHHH-CC--CC-CCCC-EE-EEECCHHCCCCCCCCEE--EEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCC
Q ss_conf             0110-25--45-5685-79-99700120017665154--45677-88876541144577831232001123210334786
Q gi|254780153|r  173 AVFA-RH--ID-FNKL-DV-VTFSAQKVLGGEAGFGI--IILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE  243 (391)
Q Consensus       173 s~g~-~p--~d-~~~i-Dv-~~a~sQK~l~~ppGl~~--v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (391)
                      .|.. .+  ++ ..+. .+ +.-+--|.+| -||+=+  ++.++ .++++......                        
T Consensus       186 ef~~~~~s~~~~~~~~~nlivlrTfSK~~g-laGlRiGy~i~~~~~~i~~l~~~~~------------------------  240 (356)
T PRK08056        186 DFIPHETGFIPALKDNPHIWVLRSLTKFYA-IPGLRLGYLVNSDDAAVARMRRQQM------------------------  240 (356)
T ss_pred             HHCCCCCCHHHHHHCCCCEEEEEECCHHCC-CCCCCHHHHHCCCHHHHHHHHHHCC------------------------
T ss_conf             643586135799845997899841416406-8520001110588999999996158------------------------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCCCCCCCCH
Q ss_conf             4466644889999999986201031899999999779999999874797167668820036531789-824731011373
Q gi|254780153|r  244 TINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDSDIASLDI  322 (391)
Q Consensus       244 ~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~~~~~~~~  322 (391)
                       ++.-+.....+...+|+   .+.=++...+...+..+.+++.+.+.+++..+.      |.+|..+ +++.+.      
T Consensus       241 -p~~vn~~a~~aa~~al~---d~~~~~~~~~~i~~~r~~l~~~L~~l~g~~v~p------s~aNFil~~~~~~~------  304 (356)
T PRK08056        241 -PWSINALAALAGEVALQ---DSAWQQATWHWLREEGARFYQALCQLPLLTVYP------GRANYLLLRCERED------  304 (356)
T ss_pred             -CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC------CCCCEEEEECCCCH------
T ss_conf             -99811999999999836---999999999999999999999986589978898------98878999889999------


Q ss_pred             HHHHHHHHHHHHHHHHCCEEECC-CCCCCCC-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             45678889999988862828726-6556767-5056861588899999999999999999
Q gi|254780153|r  323 NSQKSFCKSMLSFLEKEEIAYDI-GSYRDAP-LGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       323 ~~~~~~~~~~~~~l~~~g~~~~~-~~~r~~~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                             ..+...|.++|+++.- ..++..+ .-+||+.+   ++++.++|+++|+..+.
T Consensus       305 -------~~~~~~L~~~gIlVR~~~~f~gl~~~~lRisig---t~~en~~ll~aL~~iL~  354 (356)
T PRK08056        305 -------IDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVLT  354 (356)
T ss_pred             -------HHHHHHHHHCCEEEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf             -------999999996890997678889999998999759---99999999999999973


No 249
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=98.89  E-value=2.1e-06  Score=60.06  Aligned_cols=302  Identities=13%  Similarity=0.074  Sum_probs=155.2

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------CC-CC-CEE
Q ss_conf             9689999863210365328988999-999999999999688998579997487348999875320------57-89-707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------LG-YR-GVD   94 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~~-~~-~~~   94 (391)
                      +|+ |.+++.+++-..-|-+..|.. ...+.-++|..+.  +.+ .|+| ..||+.++|+++.=-      -+ ++ .++
T Consensus        49 ~p~-i~~ai~~q~~~l~~~~~~~~~~~~~~la~~L~~~~--~~d-~v~f-~~sGsEAve~AlklAr~~~~~~g~t~r~~i  123 (389)
T PRK01278         49 HPH-LVEALKEQAEKLWHVSNLYRIPEQERLAERLVENS--FAD-KVFF-TNSGAEAVECAIKTARRYQYGKGHPERYRI  123 (389)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC--CCC-EEEE-ECCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             789-99999999865667656536879999999975336--768-7999-687489999999999998885399997289


Q ss_pred             EEEECCHHHHHHHHHHHCCCCCEE---------EEECCCCCCCCHHHCCC--CCCEEEEEEECCCC---EEECC------
Q ss_conf             997073688888765323876306---------74057776578676785--56579974202420---22032------
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD------  154 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~------  154 (391)
                      +...++|=++....+..-+.....         ....+   ..+.+.+..  .+.++.+-.|...|   +..+.      
T Consensus       124 i~~~~~yHG~t~~~~s~sg~~~~~~~~~p~~~~~~~~~---~~d~~~l~~~~~~~iAaviiEPi~g~gG~~~~~~~yl~~  200 (389)
T PRK01278        124 ITFEGAFHGRTLATIAATGQEKYLEGFGPLVDGFDQVP---FGDIEALKAAITPNTAAILIEPIQGEGGIRPLPDEFLKG  200 (389)
T ss_pred             EEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECC---CCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             99888888676351135788443366689988824677---897899998628881799996888888960699999999


Q ss_pred             EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf             035025686148864011011025---4--556857999700120017665--154456778887654114457783123
Q gi|254780153|r  155 VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIF  227 (391)
Q Consensus       155 ~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~  227 (391)
                      ...+|+.+++++|+|=|.+=.++-   +  +.+++.=.+....|+|++  |  ++.++.+++..+..   .+        
T Consensus       201 l~~lc~~~g~llI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~g--G~P~sav~~~~ei~~~~---~~--------  267 (389)
T PRK01278        201 LRQLCDENGLLLIFDEVQCGVGRTGKLFAHEWAGVTPDIMALAKGIGG--GFPLGACLATEEAAKGM---TP--------  267 (389)
T ss_pred             HHHHHHHHCCEEEEEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCCC--CCCEEEEEECHHHHHHC---CC--------
T ss_conf             999998606538742100077755664220036768986787012468--87427998638878543---68--------


Q ss_pred             HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCC
Q ss_conf             20011232103347864466644889999999986201031899999999779999999874797167-66882003653
Q gi|254780153|r  228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETTRSNT  306 (391)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~rS~~  306 (391)
                                 ...++|+..-|+ ...+..++|+.+++++    ..++.+++.+.+.+.+..+---.+ ++.+  .|...
T Consensus       268 -----------g~~~~T~~gnp~-~~aaala~L~~i~~~~----l~~~v~~~G~~l~~~L~~l~~~~p~~i~~--vRG~G  329 (389)
T PRK01278        268 -----------GTHGSTYGGNPL-AMAVGNAVLDVVLAPG----FLDNVQKMGLYLKQKLESLVDRFPDVIEE--VRGEG  329 (389)
T ss_pred             -----------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE--EEEEE
T ss_conf             -----------876779997999-9999999999998646----99999999999999999998768671355--64503


Q ss_pred             EE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             17-8982473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r  307 SI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       307 ~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      .. .+.+.++             ...+...+.++|.++...+    +..+|+.--=.++.++|+.++++||.++.+
T Consensus       330 l~~gie~~~~-------------~~~i~~~~~~~Gll~~~~g----~~~lr~~PpL~it~~ei~~~~~~l~~al~~  388 (389)
T PRK01278        330 LMLGLKCVVP-------------SRDLVAALRDEGLLTVPAG----DNVVRLLPPLIITEEEIDEALERLERAAES  388 (389)
T ss_pred             EEEEEEECCC-------------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             6999994588-------------9999999997993897279----997999788139899999999999999975


No 250
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.88  E-value=6.3e-06  Score=57.05  Aligned_cols=276  Identities=13%  Similarity=0.114  Sum_probs=151.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             28988999999999999999688998579997487348999875320578970799707368888876532387630674
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF  120 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~  120 (391)
                      ||=|+-  -..+.++.+.+.++++.+ .|++..| ++..+..++ .++.+++.+ +..=.|+..  ...++..+..+..+
T Consensus        35 ~rYPd~--~~~~Lr~~iA~~~~v~~~-~I~vgnG-s~ElI~~l~-~~~~~~~~~-i~~PtF~~Y--~~~a~~~g~~~~~v  106 (332)
T PRK06425         35 SIYPEI--SYTDIEDQIKIYTQGLKI-KVLIGPG-LTHFIYRLL-SYINVGNII-IVEPNFNEY--KGYAFTHGIRISAL  106 (332)
T ss_pred             HHCCCC--CHHHHHHHHHHHHCCCHH-HEEECCC-HHHHHHHHH-HHHCCCCEE-EECCCHHHH--HHHHHHCCCEEEEE
T ss_conf             429499--869999999988696867-3998220-999999999-986899989-968888999--99999869989995


Q ss_pred             ECCCCCC-CCHHHCC--CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECCH-HHHCC----CC-CCCC-E
Q ss_conf             0577765-7867678--55657997420242022032035-----0256861488640110-11025----45-5685-7
Q gi|254780153|r  121 TAPYGSL-PDFSKVD--FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATSA-VFARH----ID-FNKL-D  185 (391)
Q Consensus       121 ~~~~g~~-~~~~~~~--~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs-~g~~p----~d-~~~i-D  185 (391)
                        |.... .+.+.+.  ..+.+.+|.=..-||...+..+.     .+..++.++|+|-.=. |....    +. ..+. .
T Consensus       107 --p~~~~~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY~ef~~~~~~~~~~l~~~~~N  184 (332)
T PRK06425        107 --PFNLINNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGN  184 (332)
T ss_pred             --CCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCHHHHHHHHCCCC
T ss_conf             --743332588888458989899941817201348999999999960526979999641356514663435777640798


Q ss_pred             E-EEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             9-997001200176651--5445677888765411445778312320011232103347864466644889999999986
Q gi|254780153|r  186 V-VTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLW  262 (391)
Q Consensus       186 v-~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~  262 (391)
                      + +.-+--|.+|. ||+  |.++.+++.++...+...++.                      .+++++..+    .++  
T Consensus       185 liVlRSfSK~~gL-aGlRlGY~i~~~~~i~~l~~~~~p~~----------------------v~~~a~~~~----~a~--  235 (332)
T PRK06425        185 VIIGRSLTKILGI-PSLRIGYIATDDYNMKISRKITEPWS----------------------VCDPAIDFI----RSI--  235 (332)
T ss_pred             EEEEEEHHHHHHC-CCHHHEHHCCCHHHHHHHHHCCCCCC----------------------CHHHHHHHH----HHH--
T ss_conf             8999200787616-41433331089999999997048987----------------------389999999----996--


Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE
Q ss_conf             20103189999999977999999987479716766882003653178-98247310113734567888999998886282
Q gi|254780153|r  263 LKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEI  341 (391)
Q Consensus       263 i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~  341 (391)
                       ..+.-.+...+...+..+.+++.+...++....  .    +.+|.. +++++              ...+...|.++|+
T Consensus       236 -~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~----~~aNFil~~~~~--------------a~~l~~~L~~~gI  294 (332)
T PRK06425        236 -DLDYVAKHSLDIMENERSYLINNLEAMGFRAAG--D----PSANFITFMIPD--------------AHDFYSYLLKNGI  294 (332)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--C----CCCEEEEEECCC--------------HHHHHHHHHHCCE
T ss_conf             -319999999999999999999999977797889--9----970489996799--------------9999999996991


Q ss_pred             EEC-CCCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             872-665567675-05686158889999999999999999
Q gi|254780153|r  342 AYD-IGSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       342 ~~~-~~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      ++. ...++..++ .+||+.+   ++++-++|+++|+..+
T Consensus       295 lVR~~~~~~~l~~~~iRisvg---t~~eN~~ll~aLk~~L  331 (332)
T PRK06425        295 LVRLLDDYECLGEQYIRIAIR---RRSFNIKLVNALRNFL  331 (332)
T ss_pred             EEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHHH
T ss_conf             999889989889999999789---9999999999999975


No 251
>TIGR01141 hisC histidinol-phosphate aminotransferase; InterPro: IPR005861    The biosynthesis of histidine is a central metabolic process in organisms ranging from bacteria to yeast and plants. The seventh step in the synthesis of histidine within eubacteria is carried out by a pyridoxal-5'-phosphate (PLP)-dependent l-histidinol phosphate aminotransferase (HisC, 2.6.1.9 from EC). HisC is a dimeric enzyme with a mass of approximately 80 kDa. Like most PLP-dependent enzymes, each HisC monomer consists of two domains, a larger PLP-binding domain having an alpha/beta/alpha topology, and a smaller domain. An N-terminal arm contributes to the dimerization of the two monomers . ; GO: 0004400 histidinol-phosphate transaminase activity, 0000105 histidine biosynthetic process.
Probab=98.88  E-value=3.9e-06  Score=58.43  Aligned_cols=297  Identities=18%  Similarity=0.194  Sum_probs=190.1

Q ss_pred             HHHHHHHHHHH----CCCCCCCCHHHHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEE
Q ss_conf             68999986321----036532898899999999999999968--89985799974873489998753205789-707997
Q gi|254780153|r   25 PGWSLGILEGA----LLGRSHRCVLGKERINKAIQLTRKVLE--VPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLA   97 (391)
Q Consensus        25 p~~v~~~~~~~----~l~~sHRs~~f~~i~~~~~~~l~~l~~--~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~   97 (391)
                      |+.+++++...    -|   ||=|+=.  ..+.++.|.+.++  ...+ .|++.--|+=...+.++..+++|| +.++..
T Consensus        43 ~~~~~~~~~~~l~~a~l---~RYPdp~--~~~L~~~lA~~~~~~v~~e-qi~~GGnGsDe~I~~l~raf~~PGk~~~l~~  116 (377)
T TIGR01141        43 PEKAKEALRAELKEAKL---HRYPDPD--PAELKQALAKYLGKKVDPE-QILLGGNGSDEIIDLLIRAFLEPGKDAVLVP  116 (377)
T ss_pred             CHHHHHHHHHHHHHCCC---CCCCCCC--HHHHHHHHHHHHCCCCCCC-CEEEECCCHHHHHHHHHHHHCCCCCCEEEEC
T ss_conf             88999999999850878---6798986--6899999999828898714-0378415606899999998527665457761


Q ss_pred             ECCHHHHHHHHHHHCCCCCEEEEE-CCC--CC--CCCHH--H-CCCCCCEEEEEEECCCCEEECCEEE--ECCC--C-CC
Q ss_conf             073688888765323876306740-577--76--57867--6-7855657997420242022032035--0256--8-61
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDVREFT-APY--GS--LPDFS--K-VDFDRDVVFVWNGTTSGVCVPDVGF--IPES--R-EG  164 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~~~~~-~~~--g~--~~~~~--~-~~~~~~v~~~h~ETstGv~~~~~~~--~~~~--~-~~  164 (391)
                      .=.|+.  ....++..+..+.... ..+  ++  ..+..  . .+..+.|++|.=..-||...+..++  ++..  . ++
T Consensus       117 ~Pty~m--Y~~~A~~~g~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~kLvF~c~PNNPTG~~~~~~~i~~~l~~~~~g~~  194 (377)
T TIGR01141       117 PPTYSM--YEISAKIHGAEVKKVPLDEDADGQLDLEDILVAAIDEKPKLVFLCSPNNPTGNLLSREDIEAVLERTPEGDA  194 (377)
T ss_pred             CCCHHH--HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf             775003--676553207147997405676675553789999862694089987886886752698999999971769973


Q ss_pred             EEEEEECC-HHHHC--CCCCC----CC-EEEEE-CCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             48864011-01102--54556----85-79997-00120017665--154456778887654114457783123200112
Q gi|254780153|r  165 LVICDATS-AVFAR--HIDFN----KL-DVVTF-SAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       165 llivD~vS-s~g~~--p~d~~----~i-Dv~~a-~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                      ++|||=-= -|...  ..++.    ++ ++++. +--|++|+ +|  +|+.+.+++.++.+.+.+.+             
T Consensus       195 lVV~DEAY~EF~~~~~~~~~~~ll~~ypNL~vlRTlSKafgL-AG~R~Gy~~a~~~~i~~l~kvr~P-------------  260 (377)
T TIGR01141       195 LVVVDEAYGEFSGEEDEPSVLPLLAEYPNLIVLRTLSKAFGL-AGLRVGYAIANAEIIDALNKVRAP-------------  260 (377)
T ss_pred             EEEEEECCCCCCCCCCCCCCCCHHHHCCCEEEEHHHHHHHHH-HHHHHHHHCCCHHHHHHHHHCCCC-------------
T ss_conf             899864234578886776532314207987998106788778-888898860699999999851688-------------


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEE
Q ss_conf             3210334786446664488999999998620103--189999999977999999987479716-7668820036531789
Q gi|254780153|r  234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG--GLSACVERCNANAAVLFQFIQENDWIE-NLAVDETTRSNTSICM  310 (391)
Q Consensus       234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g--Gl~~~~~r~~~~a~~l~~~i~~~~~~~-~~~~~~~~rS~~~v~~  310 (391)
                                  |--+....-+...+|+   +..  =+++..++..+..+++++.+.+..++. -+      .|.+|-.+
T Consensus       261 ------------fn~~~la~~~A~aAL~---~~~~~~~~~~~~~~~~~Re~l~~~L~~~~~~~~v~------~S~aNF~L  319 (377)
T TIGR01141       261 ------------FNLSRLAQAAAIAALR---DDDLQFIEKTVEEINAERERLYDELKKLEGLEDVY------PSDANFVL  319 (377)
T ss_pred             ------------CCCCHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE------CCCCCEEE
T ss_conf             ------------7889799999998527---14679999999999989999999987143000142------57763799


Q ss_pred             E-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEC-CCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             8-247310113734567888999998886282872-6655-67675056861588899999999999999
Q gi|254780153|r  311 K-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYD-IGSY-RDAPLGLRVWVGVTVEKEDLLLLCDWLRW  377 (391)
Q Consensus       311 ~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~-r~~~~~~RIg~~g~i~~~dv~~L~~aLe~  377 (391)
                      . ++....          ..+.+.+.|.++|+++. .+.+ ....+.+||++|   ++|+.++++++|+.
T Consensus       320 ~~~~~~~~----------~a~~~~~~L~~~GiivR~~~~~~Gl~~~~lRITvG---t~eEn~~~l~~l~e  376 (377)
T TIGR01141       320 IRFPRGGL----------DAEALFEALLEKGIIVRDLNSFPGLLPNCLRITVG---TREENDRFLEALRE  376 (377)
T ss_pred             EECCCCCC----------CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEC---CHHHHHHHHHHHHC
T ss_conf             96277677----------77999999986780686065578877762689728---87999999999850


No 252
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.88  E-value=8.2e-07  Score=62.69  Aligned_cols=296  Identities=12%  Similarity=0.019  Sum_probs=181.5

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHCCCCCEEEEE-C-----
Q ss_conf             99999999999688998579997487348999875320578970799707-3688888765323876306740-5-----
Q gi|254780153|r   50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE-SFGLGWMSDIRQLSLQDVREFT-A-----  122 (391)
Q Consensus        50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g-~~~~r~~~~~~~~~~~~~~~~~-~-----  122 (391)
                      +++-.+.|.++++.-    ++=.+.|+..+=.+++..|.++|+.+++... .+...-   ++.+.+.++..+- .     
T Consensus        63 I~~F~~dlaeFlg~D----~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyv---AAEragl~v~eVp~tg~Pey  135 (382)
T COG1103          63 IKDFLEDLAEFLGMD----EVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV---AAERAGLNVAEVPNTGYPEY  135 (382)
T ss_pred             HHHHHHHHHHHHCCC----EEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHH---HHHHCCCEEEECCCCCCCCE
T ss_conf             888999889871986----34423651256799999751589889974742278899---99863975896678999845


Q ss_pred             ---CCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--EECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEEC
Q ss_conf             ---7776578676785-----565799742024202203203--50256861488640110110254556--85799970
Q gi|254780153|r  123 ---PYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--FIPESREGLVICDATSAVFARHIDFN--KLDVVTFS  190 (391)
Q Consensus       123 ---~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--~~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~  190 (391)
                         +.+.....+++..     .....+||.+-+.|-+.+...  .+|+++++++++.|.=+.|-+|+.-.  +.|.+++|
T Consensus       136 ~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgS  215 (382)
T COG1103         136 KITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGS  215 (382)
T ss_pred             EECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCEEEEC
T ss_conf             76688889999999862489844899963577757722167899999872995685121022321136655678779724


Q ss_pred             CHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             0120017665154456778887654114457783123200112321033478644-666448899999999862010318
Q gi|254780153|r  191 AQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETI-NTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       191 sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      .+|.+...+-++++.+|++.-++.-......+       . . +..  ...|-|. .-|-+.++.-+-.+.+.+      
T Consensus       216 GHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~-------~-~-KEv--ellGCT~rGapivTlmASfP~V~eRV------  278 (382)
T COG1103         216 GHKSMAASAPIGVLAMSEEWAEIVLRRSGRAF-------P-K-KEV--ELLGCTVRGAPIVTLMASFPHVVERV------  278 (382)
T ss_pred             CCCCHHCCCCEEEEEEHHHHHHHHHHHCCCCC-------C-C-CEE--EEECCCCCCCHHHHHHHCCHHHHHHH------
T ss_conf             85300114870477513677789986315446-------5-3-325--66143246843899874077999999------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCC
Q ss_conf             99999999779999999874797167668820036531789824731011373456788899999888628287266556
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYR  349 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r  349 (391)
                       ++|..--++++.+-+.+++.+++..+-..|..    ....++..|.+..+...+..+.. =+..-|.+.| +.++.+..
T Consensus       279 -krWdeEv~kaR~fv~elEkigg~~qlG~rPk~----HdLm~Fetp~f~eIakk~~r~gy-FlY~ELK~Rg-I~GI~~G~  351 (382)
T COG1103         279 -KRWDEEVEKARWFVAELEKIGGVKQLGERPKN----HDLMKFETPVFHEIAKKHKRKGY-FLYEELKKRG-IHGIQPGQ  351 (382)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCEEEECCCHHHHHHHHCCCCCE-EEHHHHHHCC-CCCCCCCC
T ss_conf             -87889999999999999974308871779765----64255337128999875767854-6689887658-66506675


Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             767505686158889999999999999999
Q gi|254780153|r  350 DAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       350 ~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                        .+.|..++|| .+.|.|+..+++.+.-.
T Consensus       352 --Tk~~K~svyG-l~~Eqve~V~~afkeI~  378 (382)
T COG1103         352 --TKYFKLSVYG-LSWEQVEYVVDAFKEIA  378 (382)
T ss_pred             --EEEEEEEEEC-CCHHHHHHHHHHHHHHH
T ss_conf             --1378887505-77999999999999999


No 253
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.88  E-value=6e-06  Score=57.22  Aligned_cols=300  Identities=14%  Similarity=0.122  Sum_probs=163.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---------CCC-C
Q ss_conf             96899998632103653289889-999999999999996889985799974873489998753205---------789-7
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---------GYR-G   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---------~~~-~   92 (391)
                      +|+ |.+++.+++-...|-+..| .+...+..+++.++.+.  + .++| ..||+.++|+++.=..         .++ .
T Consensus        58 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~~e~l~~l~~~--~-~v~f-~~sGseAvE~AlklAr~~~~~~~~~~~~r~  132 (396)
T PRK04073         58 HPK-IIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--D-MVLP-MNTGAEAVETAIKAARRWAYDVKGVEPNKA  132 (396)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--C-EEEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             799-9999999984178766532434789999999975283--6-4896-187888999999999999876237888987


Q ss_pred             EEEEEECCHHHHHHHHHHHCCCCCE---------EEEECCCCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC----
Q ss_conf             0799707368888876532387630---------67405777657867678--556579974202420---22032----
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSLQDV---------REFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD----  154 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~----  154 (391)
                      .++...++|-++...-..--+....         .....|++   +++.++  ..++++.+-.|...|   +..|.    
T Consensus       133 ~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~~p~~---d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl  209 (396)
T PRK04073        133 EIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKKIPYG---DVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFL  209 (396)
T ss_pred             EEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCC---HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHH
T ss_conf             799977750045320522267643345778999982325752---16678861489756999989877789778998999


Q ss_pred             --EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             --0350256861488640110-110--254--5568579997001200176-6515445677888765411445778312
Q gi|254780153|r  155 --VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       155 --~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
                        ...+|+++++++|+|=|.+ ||-  .-+  +..++.=.+...-|+|++= -=++.++.+++..+...   +       
T Consensus       210 ~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~gG~~P~~av~~~~~i~~~~~---~-------  279 (396)
T PRK04073        210 KAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVKPDMYILGKALGGGVFPISCVAANRDILGVFT---P-------  279 (396)
T ss_pred             HHHHHHHHHHCCEEECCCCEECCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHCC---C-------
T ss_conf             999999998399352663410788657630010046898801025345578776058960789996166---8-------


Q ss_pred             HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT  306 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~  306 (391)
                                  ...++|+.-=| ....+..++|+.++++ +   ..+|.+++.+.+.+.+++..  .+.+.  +.|+..
T Consensus       280 ------------~~h~~T~~gnp-la~aaa~a~L~~~~~~-~---l~~~~~~~g~~l~~~L~~l~--~~~i~--~vRG~G  338 (396)
T PRK04073        280 ------------GSHGSTFGGNP-LACAVSIAALDVIEEE-K---LPERSLELGEYFKEQLKEID--NPMIK--EVRGRG  338 (396)
T ss_pred             ------------CCCCCCCCCCH-HHHHHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHHHCC--CCCEE--ECCCCE
T ss_conf             ------------99760548898-9999999999999875-7---99999999999999998258--99748--723377


Q ss_pred             EEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             178-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  307 SIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       307 ~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      ... +.+.++             .+.+...+.++|.++...    -+..+|+.--=.+++++++.+++.||.++
T Consensus       339 l~~giel~~~-------------~~~~~~~~~~~Gll~~~~----~~~~ir~~PpL~it~~eid~~l~~l~~~L  395 (396)
T PRK04073        339 LFIGVELNEP-------------ARPYCEALKEEGLLCKET----HETVIRFAPPLVISKEELDWALEKIKAVL  395 (396)
T ss_pred             EEEEEEECCC-------------HHHHHHHHHHCCEEEEEC----CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             9999995875-------------899999999499799527----99989997993689999999999999985


No 254
>PRK08555 consensus
Probab=98.85  E-value=5.6e-06  Score=57.37  Aligned_cols=313  Identities=14%  Similarity=0.082  Sum_probs=155.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEEC
Q ss_conf             968999986321036532898--899999999999999968899857999748734899987532057-89-70799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~g   99 (391)
                      +|+ |.+++.+++=...|.+.  -..+...+.-+.|.+++.-..+..| ++..||+.++|+++.=... .+ ...+...+
T Consensus        70 ~p~-i~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v-~f~~SGSEAvE~AiklAr~~tgr~~ii~~~~  147 (443)
T PRK08555         70 HPR-VIEAVEEQLHKLWHAAGTDFYNEYQVELAKKLVEIAPGDFEKKV-FFSNSGTEANEAALKIAKWYTGRKMFIAFIG  147 (443)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE-EEECCHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             799-99999999861767465643688999999999985775656559-9808778899999999887379988999958


Q ss_pred             C-HHHHHHHHHH-------HCC-C---CCEEEEE------CCCCCC--CCH--------HHCC--------CCCCEEEEE
Q ss_conf             3-6888887653-------238-7---6306740------577765--786--------7678--------556579974
Q gi|254780153|r  100 S-FGLGWMSDIR-------QLS-L---QDVREFT------APYGSL--PDF--------SKVD--------FDRDVVFVW  143 (391)
Q Consensus       100 ~-~~~r~~~~~~-------~~~-~---~~~~~~~------~~~g~~--~~~--------~~~~--------~~~~v~~~h  143 (391)
                      + .|........       +.+ +   ..+..+.      .+++..  ...        +.++        ....++.+-
T Consensus       148 ~yHG~t~g~~s~t~~~~~~~~~~~p~~~~~~~vp~p~~~r~p~~~~~~~~~~~~~~~~~~~ie~~i~~~~~~~~~iAavi  227 (443)
T PRK08555        148 AFHGRTQGSLSLTASKPVQRSGFFPTMPGVEHVPYPNPYRNPWGIDGYENPDELVNRVIDYIEEYLFEHYVPPEEVAGIF  227 (443)
T ss_pred             CCCCCCCCCEEEECCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             70789721168725850110477899999368168862246445666569999999999999999986257989889999


Q ss_pred             EECCCC---EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCC--EEEEECCHHCCCCCCC--CEEEE
Q ss_conf             202420---22032------0350256861488640110-110--254--55685--7999700120017665--15445
Q gi|254780153|r  144 NGTTSG---VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKL--DVVTFSAQKVLGGEAG--FGIII  205 (391)
Q Consensus       144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~  205 (391)
                      .|...|   +..|.      ...+|+++++++|+|=|.+ ||-  ..+  +.+++  |++  .-.|+|++  |  ++.++
T Consensus       228 ~EPi~g~gG~~~pp~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gKgl~~--G~Pl~av~  303 (443)
T PRK08555        228 FEPIQGEGGYVVPPKNFFKELKKLADKYGILLIDDEVQMGLGRTGKMFAIEHFGVEPDII--TLAKALGG--GIPIGATI  303 (443)
T ss_pred             EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEECCCCCCCCEE--EECCCCCC--CCCEEEEE
T ss_conf             958768889875887887899999997494696354412787024741231688899889--97742448--87508999


Q ss_pred             ECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             67788876541144577831232001123210334786446664488999999998620103189999999977999999
Q gi|254780153|r  206 LSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQ  285 (391)
Q Consensus       206 ~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~  285 (391)
                      ++++. .   . ..                  ....++|+..-|+. ..+...+|+.++ ++    ...+.+++.+.+.+
T Consensus       304 ~~~e~-~---~-~~------------------~~~h~~T~~gnpla-~aaa~a~L~~i~-e~----l~~~~~~~g~~l~~  354 (443)
T PRK08555        304 FRADL-D---F-KK------------------PGLHSNTFGGNALA-SAAGLAVIEEIK-EG----LLENVQKLGKYFRE  354 (443)
T ss_pred             EHHHH-C---C-CC------------------CCCCCCCCCCCHHH-HHHHHHHHHHHH-HH----HHHHHHHHHHHHHH
T ss_conf             82453-5---5-77------------------77737688854899-999999999999-77----99999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCEE-EEEE-CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCC
Q ss_conf             98747971676688200365317-8982-473101137345678889999988862828726655676750568615888
Q gi|254780153|r  286 FIQENDWIENLAVDETTRSNTSI-CMKI-VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTV  363 (391)
Q Consensus       286 ~i~~~~~~~~~~~~~~~rS~~~v-~~~~-~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i  363 (391)
                      .+.++.--.+.+.+  .|..... .+.+ .|......    .......+.....++|.++...+    +..+|+.--=.+
T Consensus       355 ~L~~l~~~~~~v~d--vRG~Gl~~gielv~~~~~~~~----~~~~~~~i~~~~~~~Gll~~~~g----~n~ir~~PPL~i  424 (443)
T PRK08555        355 RLEELKEKYEIIGD--VRGLGLAWAIEFVKDRKTKEP----NPKLRDRVVVEAFKRGLILLGCG----KSAIRLIPPLII  424 (443)
T ss_pred             HHHHHHHCCCCEEE--ECCCCEEEEEEEECCCCCCCC----CHHHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCC
T ss_conf             99998861997787--232667999998237765677----98999999999997890997379----998999779438


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999
Q gi|254780153|r  364 EKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       364 ~~~dv~~L~~aLe~~~~~  381 (391)
                      +.+||+.+++.||.++++
T Consensus       425 t~~eid~~~~~l~~al~~  442 (443)
T PRK08555        425 SEEEAKIGLEILEEAIKV  442 (443)
T ss_pred             CHHHHHHHHHHHHHHHHH
T ss_conf             899999999999999963


No 255
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=98.84  E-value=3e-06  Score=59.09  Aligned_cols=218  Identities=14%  Similarity=0.057  Sum_probs=132.0

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEE---C
Q ss_conf             999999999999996889985799974873489998753205789707997-073688888765323876306740---5
Q gi|254780153|r   47 KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFT---A  122 (391)
Q Consensus        47 ~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~---~  122 (391)
                      ..++++++++..++|+..   +.+|+.+|.|.++-++++.++++|+++++. |..-|-   -.+....+...+.+.   .
T Consensus        65 ~g~I~eAq~~aA~~fga~---~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv~RN~HkSv---~~al~l~g~~Pvyl~p~~~  138 (417)
T pfam01276        65 SGPIKEAQKYAARVFGAD---KSYFVVNGTSGANKTVGMAVCTPGDTVLIDRNCHKSI---HHALMMSGATPVYLEPTRN  138 (417)
T ss_pred             CHHHHHHHHHHHHHHCCC---CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHH---HHHHHHCCCEEEEECCCCC
T ss_conf             639999999999983999---3699846830999999997438999899716418999---9999986985899536424


Q ss_pred             CCCCC--CCH------------HHCCCCCC--EEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH--HHHCCCCC-
Q ss_conf             77765--786------------76785565--7997420242022032035--0256861488640110--11025455-
Q gi|254780153|r  123 PYGSL--PDF------------SKVDFDRD--VVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA--VFARHIDF-  181 (391)
Q Consensus       123 ~~g~~--~~~------------~~~~~~~~--v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs--~g~~p~d~-  181 (391)
                      ++|..  .++            ++.+..+.  ++++-+-|=.|+..++..+  +++.++.+++||.-=.  ++=.|+.. 
T Consensus       139 ~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~plp~~  218 (417)
T pfam01276       139 AYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTYDGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIPIYAD  218 (417)
T ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHH
T ss_conf             34661588825459999999998587656850899989998706528999999986339879997887520246878334


Q ss_pred             ---CCCE-------EEEECCHHCCCCCCCCEEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCH
Q ss_conf             ---6857-------9997001200176651544567788-8765411445778312320011232103347864466644
Q gi|254780153|r  182 ---NKLD-------VVTFSAQKVLGGEAGFGIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSL  250 (391)
Q Consensus       182 ---~~iD-------v~~a~sQK~l~~ppGl~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v  250 (391)
                         -+.|       +++-|.+|-|++-..-+++-++... +++           ..  +......      .|| -.|+-
T Consensus       219 a~~~gad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~-----------~~--~~~~l~~------~qT-TSPsY  278 (417)
T pfam01276       219 ASPMGGDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNH-----------KR--FNEAFMM------HTS-TSPFY  278 (417)
T ss_pred             HHHCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCH-----------HH--HHHHHHH------HCC-CCHHH
T ss_conf             6656788666772279861111354304343212167877899-----------99--9999997------738-87489


Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             88999999998620103189999999977999999987479
Q gi|254780153|r  251 LCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND  291 (391)
Q Consensus       251 ~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~  291 (391)
                      .++.-+..+-.+++.++|- ..+.+.-+.+..+++.+.+..
T Consensus       279 ~lmASLD~ar~~m~~~~G~-~l~~~~i~~a~~~R~~i~~l~  318 (417)
T pfam01276       279 PIVASLDVAAAMMEGNSGR-RLWQESLERAIEFRKEIKTLN  318 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999997535549-999999999999999998645


No 256
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.82  E-value=1.4e-05  Score=54.90  Aligned_cols=296  Identities=14%  Similarity=0.055  Sum_probs=149.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--------CC------CCEEEEEECCHHHHHH
Q ss_conf             289889999999999999996889985799974873489998753205--------78------9707997073688888
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--------GY------RGVDVLAWESFGLGWM  106 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--------~~------~~~~~~~~g~~~~r~~  106 (391)
                      |-+.-+..-..+..+.+.+++..+.-.+| |+..|||.++|+++-=..        .+      +.+++...++|=++..
T Consensus        94 ~~~~~~~~~~~~l~~~l~~~~~~~~l~~v-ff~nsGSEAvE~AlKlA~~~~~r~~~~~g~~~~~~~kii~~~~sYHG~T~  172 (449)
T PRK08297         94 SNSDVYTVAMARFVDTFARVLGDPALPHL-FFVDGGALAVENALKVAFDWKSRHNEAHGIDPALGTRVLHLRGAFHGRSG  172 (449)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEE-EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCH
T ss_conf             65236669999999999986188777758-86187689999999999998654300236777677569996365379607


Q ss_pred             HHHHHCCC----------CCEEEEECCCCCC----CC--------HHHC----C-CCCCEEEEEEECCCCE---EECC--
Q ss_conf             76532387----------6306740577765----78--------6767----8-5565799742024202---2032--
Q gi|254780153|r  107 SDIRQLSL----------QDVREFTAPYGSL----PD--------FSKV----D-FDRDVVFVWNGTTSGV---CVPD--  154 (391)
Q Consensus       107 ~~~~~~~~----------~~~~~~~~~~g~~----~~--------~~~~----~-~~~~v~~~h~ETstGv---~~~~--  154 (391)
                      .-..-.+.          .+......|+...    ..        ++++    + ....++.+-.|...|.   ..+.  
T Consensus       173 gals~tg~~~~~~~~~p~~~~~~~~~P~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvIvEPIqG~gG~~~~p~~  252 (449)
T PRK08297        173 YTLSLTNTDPVKTARFPKFDWPRIDAPYVRPGLDADAVAALEAEALRQARAAFEAHPHDIACFIAEPIQGEGGDRHFRPE  252 (449)
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHH
T ss_conf             77886179853357888888877889987789873016678999999999999858997799999678747799889989


Q ss_pred             ----EEEECCCCCCEEEEEECCHHHHCCCCC-----CCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf             ----035025686148864011011025455-----685--799970012001766515445677888765411445778
Q gi|254780153|r  155 ----VGFIPESREGLVICDATSAVFARHIDF-----NKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL  223 (391)
Q Consensus       155 ----~~~~~~~~~~llivD~vSs~g~~p~d~-----~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~  223 (391)
                          .+.+|+++++++|+|=|.+=.++-=.|     .++  |++  ..-|+|+  .|  .+..+....+....       
T Consensus       253 yl~~lr~lc~~~giLLI~DEVqtGfGRTG~~fa~e~~gv~PDii--t~~Kgl~--~G--~~~~~~~~~~~~~~-------  319 (449)
T PRK08297        253 FFAAMRALCDEHDALLIFDEVQTGCGLTGTAWAYQQLGVAPDVV--AFGKKTQ--VC--GVMAGRRVDEVADN-------  319 (449)
T ss_pred             HHHHHHHHHHHCCCEEECCCCEECCCCCCCHHHCCCCCCCCCEE--EECCCCC--CC--CHHHHHHHHHHHHH-------
T ss_conf             99999999997188454452202787676513313358999889--8776334--55--07788999999988-------


Q ss_pred             CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCC
Q ss_conf             312320011232103347864466644889999999986201031899999999779999999874797167-6688200
Q gi|254780153|r  224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETT  302 (391)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~  302 (391)
                        .+.        .....++|+.--|+ ...+..++|+.+++++    ..+|.+++.+.+.+.++...--.+ ++.  +.
T Consensus       320 --~~~--------~~~~~~sTf~Gnp~-acaaala~L~ii~~e~----l~~~~~~~g~~l~~~L~~l~~~~p~ii~--dV  382 (449)
T PRK08297        320 --VFA--------VSSRINSTWGGNLT-DMVRARRILEVIEAEG----LFDRARQQGAYLLARLDELAAEFPAVVL--DP  382 (449)
T ss_pred             --HHC--------CCCCCCCCCCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCEE--EE
T ss_conf             --641--------68777888898889-9999999999984304----9999999999999999999976898446--53


Q ss_pred             CCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             365317-8982473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r  303 RSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       303 rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      |..... .+.++++..           ...+...+.++|+++...+    .+.+|+.--=.++.++++.+++.|+.++++
T Consensus       383 RG~GLm~giel~~~~~-----------~~~~~~~~~~~Gll~~~~g----~~~irl~PPL~it~~eid~~~~~l~~al~e  447 (449)
T PRK08297        383 RGRGLMCAFSLPTTAD-----------RDELIRRLWRERVILLPAG----EDSVRFRPALTVSRAEIDAAVDAVRRVLRT  447 (449)
T ss_pred             EECCEEEEEECCCHHH-----------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             1156899998288678-----------9999999997895897579----997999899128899999999999999998


Q ss_pred             H
Q ss_conf             9
Q gi|254780153|r  382 Q  382 (391)
Q Consensus       382 ~  382 (391)
                      .
T Consensus       448 l  448 (449)
T PRK08297        448 L  448 (449)
T ss_pred             H
T ss_conf             6


No 257
>PRK07778 consensus
Probab=98.80  E-value=1.6e-05  Score=54.44  Aligned_cols=321  Identities=13%  Similarity=0.070  Sum_probs=165.9

Q ss_pred             CCCCCCCCCCC-CHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             88868887768-96899998632103----65328988999999999999999688998579997487348999875320
Q gi|254780153|r   13 RPFFSSGPCAK-RPGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL   87 (391)
Q Consensus        13 ~~~F~pGP~~~-~p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl   87 (391)
                      -.+|+-|=-.. .|..+++++.+.+-    ++++ +.=-.++-+.+-+.+++.++.+=+-+=++++.|++.++..++..+
T Consensus        32 vi~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~Y~~-~~G~p~LR~aia~~~~~~~g~~~~pe~I~vt~Ga~~al~~~~~~l  110 (386)
T PRK07778         32 LVNLSAGQPSAGAPEPVRAAAAAALHRNQLGYTV-ALGIPELREAIAADYQRRHGITVEPDDVVVTTGSSGGFLLAFLAC  110 (386)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHH
T ss_conf             0788598999986899999999986349999899-978499999999999998689988554898178799999999996


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCC----CCCCEEEEEEECCCCEEECCEE-----
Q ss_conf             5789707997073688888765323876306740--5777657867678----5565799742024202203203-----
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVD----FDRDVVFVWNGTTSGVCVPDVG-----  156 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~----~~~~v~~~h~ETstGv~~~~~~-----  156 (391)
                      +++||.+++-+=.|-.- ...+...+ ..+..+.  .+.+..++.+.++    ..+.+.++.=..-||...+..+     
T Consensus       111 ~~pGD~Vlv~~P~Y~~y-~~~~~~~g-~~~v~vp~~~~~~~~~~~~~l~~~~~~~k~iil~~P~NPTG~v~s~~~l~~l~  188 (386)
T PRK07778        111 FDVGDRVAMASPGYPCY-RNILSALG-CEVVEIPCGPDTRFQPTAAMLAELDPPVRGVIVASPANPTGTVIAPEELAAIA  188 (386)
T ss_pred             CCCCCEEEECCCCCCCH-HHHHHHCC-CEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf             49999899867865107-99999739-82572367744566723889862586643999899989887785079999999


Q ss_pred             EECCCCCCEEEEEECCHH---HHCCC-----CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             502568614886401101---10254-----5568579997001200176651--5445677888765411445778312
Q gi|254780153|r  157 FIPESREGLVICDATSAV---FARHI-----DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       157 ~~~~~~~~llivD~vSs~---g~~p~-----d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
                      .+|.+++..+|.|-+=+-   .+.+.     +..+--+++.|.-|.++ .||+  |.++..++.++......        
T Consensus       189 ~la~~~~i~iisDEiY~~l~~~~~~~~~~~~~~~~~~i~i~S~SK~~~-~~G~RiG~~~~p~~l~~~~~~~~--------  259 (386)
T PRK07778        189 SWCEASGVRLISDEVYHGLVYEGAPPTSCAWETSREAVVVNSFSKYYA-MTGWRLGWLLVPTELRRAVDRLT--------  259 (386)
T ss_pred             HHHHHCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCC-CCCCEEEEEEECHHHHHHHHHHH--------
T ss_conf             998537879994343253115899986430024786899930431125-67760699984899999999998--------


Q ss_pred             HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT  306 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~  306 (391)
                                     ..+...+|+..-++...++..- ...-++...++++++.+.+.+.+.+.+.......+    +..
T Consensus       260 ---------------~~~~~~~~~~~Q~aa~~al~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~p~~----G~f  319 (386)
T PRK07778        260 ---------------GNFTICPPALSQYAAVAAFTPE-ATAEADGHLAHYAENRRLLLDGLRALGITRLAPAD----GAF  319 (386)
T ss_pred             ---------------HCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC----EEE
T ss_conf             ---------------5076787789999999995601-28999999999999999999999975995417998----478


Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             17898247310113734567888999998886282872665--5676750-5686158889999999999999
Q gi|254780153|r  307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      -+-..+++..   .+   ...+.   ..++.+.|+++--|.  +...+.+ +|++...  ++++++.-++-|+
T Consensus       320 y~~~~~~~~~---~d---~~~f~---~~Ll~~~gV~v~PG~~Fg~~~g~~~vRlsf~~--~~~~l~eal~RL~  381 (386)
T PRK07778        320 YVYADVSHLT---DD---SLAFC---SKLLADTGVAIAPGIDFDTVRGNSFVRLSFAG--PTADIEEALRRIG  381 (386)
T ss_pred             EEEEECCCCC---CC---HHHHH---HHHHHHCCEEEECCCCCCCCCCCCEEEEEEEC--CHHHHHHHHHHHH
T ss_conf             9978898889---99---99999---99998399999758566889999969999839--8999999999999


No 258
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative; InterPro: IPR010962    Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy .   PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic .   This entry contains a number of enzyme families:  Serine palmitoyltransferase Glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 5-aminolevulinic acid synthase 8-amino-7-oxononanoate synthase    All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.; GO: 0016740 transferase activity, 0030170 pyridoxal phosphate binding.
Probab=98.79  E-value=6.6e-06  Score=56.93  Aligned_cols=310  Identities=16%  Similarity=0.129  Sum_probs=198.8

Q ss_pred             CHHHHHHHHHHHCCCC-----CCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             9689999863210365-----3289-889999999999999996889985799974873489998753205789707997
Q gi|254780153|r   24 RPGWSLGILEGALLGR-----SHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~-----sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      +|. ..+++++.+..+     +=|+ .=-.++.+|..+.|.+|=++..   .+++| ||=..+-+++..+++++|-.+++
T Consensus        49 hp~-Lk~aA~~a~~~yGvGAGAVRTIaGTl~lH~eLE~~LA~FK~teA---Al~fq-SGF~~N~GvlSa~L~k~ddG~v~  123 (392)
T TIGR01825        49 HPR-LKEAAKEAIQQYGVGAGAVRTIAGTLELHEELEEKLAKFKKTEA---ALVFQ-SGFNTNQGVLSALLRKGDDGIVL  123 (392)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE---EEHHH-CCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             876-89999999986596224121043377899999999875538201---10103-12237799998762358871587


Q ss_pred             ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC---CC-EEEEE-EECCCCEEECCEEE--ECCCCCCEE
Q ss_conf             073688888765323876306740577765786767----855---65-79974-20242022032035--025686148
Q gi|254780153|r   98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD---RD-VVFVW-NGTTSGVCVPDVGF--IPESREGLV  166 (391)
Q Consensus        98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~---~~-v~~~h-~ETstGv~~~~~~~--~~~~~~~ll  166 (391)
                      +..-=.--.-+-.|.-.+.-.++.=  -...|++..    ...   .. ..+|- +=+--|=.-|+-++  ++..+++++
T Consensus       124 SdELNHASIIDG~RLtkA~k~~y~H--~dm~DL~~~l~e~~~~Gqy~~~l~vTDGVFSMDGdvApLp~iVE~Ae~Yda~~  201 (392)
T TIGR01825       124 SDELNHASIIDGLRLTKAKKKIYKH--VDMDDLERVLRENVEEGQYKKKLIVTDGVFSMDGDVAPLPEIVELAEKYDALV  201 (392)
T ss_pred             ECCCCHHHHHHCCCCCCCCEEEEEC--CCHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCCCCHHHHHHHHCCCEE
T ss_conf             2000203455042237885689845--98458999997160337544368996650425678788732334632459579


Q ss_pred             EEEEC--CHHHH------C-CC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             86401--10110------2-54--55685799970012001766515445677888765411445778312320011232
Q gi|254780153|r  167 ICDAT--SAVFA------R-HI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       167 ivD~v--Ss~g~------~-p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                      .||=-  |...+      . .|  +.+++|+=+..--|++|+..|  -++-+++++|-+...  .+  |..         
T Consensus       202 yVDDAHGsGVlGe~GrGtV~HFGL~y~~v~~qvGTLSKA~GvvGG--Y~AG~~~lidyL~~~--aR--PFL---------  266 (392)
T TIGR01825       202 YVDDAHGSGVLGEKGRGTVKHFGLEYDKVDIQVGTLSKAIGVVGG--YVAGSKELIDYLKAR--AR--PFL---------  266 (392)
T ss_pred             EEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHCCCCC--CCCCCHHHHHHHHHC--CC--CCC---------
T ss_conf             986334664447788713530375416467885552232225664--234888999999862--89--860---------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS  315 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~  315 (391)
                            .||-.-||  .+-|+.+|++.+.++   +...+|=+.|++.+...|.++++ ...      .|.+-+|..+-  
T Consensus       267 ------FSta~~Pa--~~~A~~~Av~~l~~~---~~l~~kLW~Nt~ylk~~L~~LGy-dl~------~S~tPItPv~~--  326 (392)
T TIGR01825       267 ------FSTALPPA--VVAALIEAVDVLQES---PELMEKLWDNTRYLKAGLSKLGY-DLG------ESETPITPVLI--  326 (392)
T ss_pred             ------CCCCCCHH--HHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHCC-CCC------CCCCCCCCEEE--
T ss_conf             ------12578807--899999999987079---31477767889999987676164-114------76686124587--


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCE-EEEECCC--CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             101137345678889999988862-828726655676750-5686158--8899999999999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLG-LRVWVGV--TVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~-~RIg~~g--~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                              .+++..+.+..+|.++ |+....=.|+++++| =||=++.  +.|.+|++..++|.|.+-++.+
T Consensus       327 --------Gde~~A~efS~rL~~~yGvFa~sivFPTVp~g~ARiR~~~tA~HTkd~L~~al~aye~~Gk~l~  390 (392)
T TIGR01825       327 --------GDEKVAQEFSRRLLDEYGVFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG  390 (392)
T ss_pred             --------CCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHC
T ss_conf             --------6515689999987775290899842165669884212465613026679999999998678725


No 259
>PRK08354 putative aminotransferase; Provisional
Probab=98.74  E-value=2.4e-05  Score=53.39  Aligned_cols=275  Identities=15%  Similarity=0.066  Sum_probs=138.9

Q ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH
Q ss_conf             89999863210365328988999999999999999688998579997487348999875320578970799707368888
Q gi|254780153|r   26 GWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW  105 (391)
Q Consensus        26 ~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~  105 (391)
                      ..+.+++....- ..+|=|+..    ++++.+.+.++.    .+++ ..|++.++..+..-++ +++.+++..=.|+.. 
T Consensus        23 ~~~~~~~~~~~~-~~~~YP~~~----~L~~~la~~~g~----~i~~-~~Gs~e~i~~l~~~~~-~~~~vl~~~Ptf~~Y-   90 (312)
T PRK08354         23 EWLDEMFERAVE-ISGRYTYYE----WLEEEFSKLFGE----PITI-TAGITEALYLIGILAL-RDRKVIIPRHTYGEY-   90 (312)
T ss_pred             HHHHHHHHHHHH-HHCCCCCHH----HHHHHHHHHHCC----CEEE-CCCHHHHHHHHHHHHC-CCCEEEEECCCHHHH-
T ss_conf             299999996056-400499989----999999887687----9699-2679999999999976-989899935999999-


Q ss_pred             HHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECCH-HHHCC-
Q ss_conf             8765323876306740577765786767855657997420242022032035-----0256861488640110-11025-
Q gi|254780153|r  106 MSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATSA-VFARH-  178 (391)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs-~g~~p-  178 (391)
                       ..+++..+..+.....+..  ...+.++..+.+.+|.=..-||...+..+.     .+..++.++|+|-.=. |...+ 
T Consensus        91 -~~~a~~~g~~v~~~~~d~~--~l~~~~~~~~~v~l~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY~ef~~~~~  167 (312)
T PRK08354         91 -ERVARFFAARIIKGPNDPE--KLEELVEKNSVVFFCNPNNPDGKYYNFKELAPLIDAVEDKNVLLILDEAFIDFVKKAE  167 (312)
T ss_pred             -HHHHHHCCCEEEECCCCHH--HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCC
T ss_conf             -9999986987873599989--9986304898899968989867868989999999864777848997404777367633


Q ss_pred             -CCCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             -45568579997001200176651--544567788876541144577831232001123210334786446664488999
Q gi|254780153|r  179 -IDFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIED  255 (391)
Q Consensus       179 -~d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~a  255 (391)
                       .+..++ ++.-+--|.+|. ||+  |.++.+++++++.   ..+                         +.-+.....+
T Consensus       168 ~~~~~nl-ivlrS~SK~~gl-aGlRlGy~i~~~e~i~~~---r~p-------------------------~~vn~~a~~~  217 (312)
T PRK08354        168 SPEGENI-IKLRTFTKSYGV-PGIRVGYVKGFEEAFRSV---RMP-------------------------WGIGSLGYAF  217 (312)
T ss_pred             CCCCCCE-EEEEECCHHHCC-CCHHHHHHHCCHHHHHHH---CCC-------------------------CCCCHHHHHH
T ss_conf             4777988-999746264357-404343662789999986---389-------------------------8874999999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999862010318999999997799999998747971676688200365317898247310113734567888999998
Q gi|254780153|r  256 YIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       256 l~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      +..+++    + ..+.+.+.    .+.++...+....+..      ..|.+|-.+.-. +     +       ...+...
T Consensus       218 ~~~~l~----d-~~~~~~~~----~~~~~~er~~l~~~~~------~~s~aNFil~~~-~-----~-------a~~~~~~  269 (312)
T PRK08354        218 LEFLLE----D-NFEHLKKT----LPLIWREKERFEKFLY------VKSDANFFIKDV-G-----D-------AEKFVEF  269 (312)
T ss_pred             HHHHHH----H-HHHHHHHH----HHHHHHHHHHHHCCCC------CCCCCCEEEEEC-C-----C-------HHHHHHH
T ss_conf             999988----1-69999999----9999999999956236------899673899877-9-----9-------9999999


Q ss_pred             HHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             88628287266556767505686158889999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      |.++|+++.-...-..+..+||+.+   ++++.++|+++|+
T Consensus       270 L~~~gIlVR~~~~fgl~~~iRisvg---~~een~~li~aLk  307 (312)
T PRK08354        270 LKRNGILVRDCTSFGLPGYVRFSVR---DREENEKLLNALR  307 (312)
T ss_pred             HHHCCEEEEECCCCCCCCEEEEECC---CHHHHHHHHHHHH
T ss_conf             9839919996899999998999719---9999999999999


No 260
>PRK09265 aminotransferase AlaT; Validated
Probab=98.74  E-value=2.5e-05  Score=53.31  Aligned_cols=324  Identities=14%  Similarity=0.096  Sum_probs=161.3

Q ss_pred             HHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             689999863210365328---988999999999999999688998-5799974873489998753205789707997073
Q gi|254780153|r   25 PGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES  100 (391)
Q Consensus        25 p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~  100 (391)
                      |+.+.+++...+=+ .|.   +.=..++-+.+-+.+++-++..-+ .+| +++.|++.++..+++.++.+||.+++-.=+
T Consensus        51 P~~i~~a~~~a~~~-~~~Yt~~~G~~eLReaIA~~~~~~~~~~~~p~~I-~vT~Ga~~al~~~~~all~pGDeVlvp~P~  128 (404)
T PRK09265         51 PDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDI-YIGNGVSELIVMAMQALLNNGDEVLVPAPD  128 (404)
T ss_pred             CHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHE-EECCCHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             89999999987444-8998988888999999999999756999888997-875888999999999964998989994688


Q ss_pred             HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEE
Q ss_conf             68888876532387630674-057776578676785-----565799742024202203203-----5025686148864
Q gi|254780153|r  101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICD  169 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD  169 (391)
                      |-.. ...+...++..+.+. ....+..+++++++.     .+.+.++.=..-||...+...     .+|..++..+|.|
T Consensus       129 Yp~Y-~~~~~l~g~~~v~~~~~~~~~f~~d~~~l~~~i~~~tk~iil~nP~NPTG~v~~~~~l~~l~~~a~~~~i~visD  207 (404)
T PRK09265        129 YPLW-TAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFAD  207 (404)
T ss_pred             CCHH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEC
T ss_conf             7306-899997698899985263237788999999765745559998689795120025046889999763155899850


Q ss_pred             ECCHHH---HCC-C-----CCCCCEEEEECCHHCCCCCCCCEEE--EEC-HHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf             011011---025-4-----5568579997001200176651544--567-788876541144577831232001123210
Q gi|254780153|r  170 ATSAVF---ARH-I-----DFNKLDVVTFSAQKVLGGEAGFGII--ILS-PASVERLEKYVPSWPLPKIFRMVKGGRVME  237 (391)
Q Consensus       170 ~vSs~g---~~p-~-----d~~~iDv~~a~sQK~l~~ppGl~~v--~~s-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (391)
                      -+=+-.   +.+ .     ..+..-+.+.|.-|.++ .||+=+-  +++ ++...+  .         +..   ..... 
T Consensus       208 EiY~~l~~d~~~~~s~~~l~~~~~~I~~~s~SK~~~-m~G~RiG~~v~~~p~~~~~--~---------~i~---~~~~l-  271 (404)
T PRK09265        208 EIYDKILYDGAEHISIASLAPDLLCVTFNGLSKAYR-VAGFRVGWMVLSGPKKHAK--G---------YIE---GLDML-  271 (404)
T ss_pred             CHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCC-CCCCCEEEEEECCCHHHHH--H---------HHH---HHHHH-
T ss_conf             114552369998878788198605999736774556-7755279999529199999--9---------999---99988-


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf             33478644666448899999999862010318999999997799999998747971676688200365317898247310
Q gi|254780153|r  238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI  317 (391)
Q Consensus       238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~  317 (391)
                          .++...+++..-++...+|.......-+.....|..++.+.+++.+.+.+++....++-.     -..|.--++..
T Consensus       272 ----~~~~~c~~~~~Q~a~~~al~~~~~~~~~~~~~~rl~~~Rd~~~~~L~~i~g~~~~~P~Ga-----fy~f~~l~~~~  342 (404)
T PRK09265        272 ----ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGA-----LYAFPKLDPKV  342 (404)
T ss_pred             ----HHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE-----EEEEEECCCCC
T ss_conf             ----540156882899999999738312999999999999999999999973899575689838-----99830877331


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             113734567888999998886282872665--567675056861588899999999999999999999
Q gi|254780153|r  318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      ..  ......+   ...+|.++|+++--|.  +..-+.-||++.  ..++++++.-++-|+.+++.-|
T Consensus       343 ~~--~~d~~~f---~~~Ll~e~gV~v~PG~~Fg~~~~~~vRlsf--~~~~e~l~eal~Rl~~~l~~~r  403 (404)
T PRK09265        343 YP--IHDDEKF---VLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEDAIGRIGRFLSGYR  403 (404)
T ss_pred             CC--CCCHHHH---HHHHHHHCCEEEECCCCCCCCCCCEEEEEE--CCCHHHHHHHHHHHHHHHHHHC
T ss_conf             79--9999999---999998699999778502889999899997--9999999999999999999840


No 261
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164   Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=98.74  E-value=1.3e-05  Score=55.15  Aligned_cols=307  Identities=18%  Similarity=0.166  Sum_probs=190.2

Q ss_pred             CHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH-----HCC----CC
Q ss_conf             9689999863210----3653289889999999999999996889985799974873489998753-----205----78
Q gi|254780153|r   24 RPGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW-----SLL----GY   90 (391)
Q Consensus        24 ~p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~-----nl~----~~   90 (391)
                      +|. |++||..+.    |   |=-.-|.+++....+-+.+||+-+-+ .|++|. +|+.+.|+++=     ...    .+
T Consensus        60 hP~-i~~Al~~Q~~KlTL---~Sraf~nd~lg~~~~~~t~LfgGk~~-~vL~mN-TGaEAvEtA~KLAR~WgY~~K~ip~  133 (426)
T TIGR01885        60 HPK-IVNALKNQADKLTL---TSRAFHNDVLGEFAKYLTKLFGGKYE-KVLPMN-TGAEAVETALKLARKWGYEVKGIPR  133 (426)
T ss_pred             CHH-HHHHHHHHHHHCCC---HHHHHHCCHHHHHHHHHHHHCCCCCC-EEECCC-CCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             716-89999999851371---02766060357899999975499510-560456-8734799999999974413578557


Q ss_pred             CC-EEEEEECCHHHHHHHHHHHCCCC----------CE------EEEECCCCCCCCHHHC-CC--C--CCEEEEEEECCC
Q ss_conf             97-07997073688888765323876----------30------6740577765786767-85--5--657997420242
Q gi|254780153|r   91 RG-VDVLAWESFGLGWMSDIRQLSLQ----------DV------REFTAPYGSLPDFSKV-DF--D--RDVVFVWNGTTS  148 (391)
Q Consensus        91 ~~-~~~~~~g~~~~r~~~~~~~~~~~----------~~------~~~~~~~g~~~~~~~~-~~--~--~~v~~~h~ETst  148 (391)
                      ++ ..+...|.|.+|-+.-+..--..          -.      -....|+|.+..+... +.  .  ++|+.+-.|=..
T Consensus       134 ~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYgd~EAl~~aL~~P~~~GDnVAA~i~EPIQ  213 (426)
T TIGR01885       134 NKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYGDLEALRKALQDPKKTGDNVAAFILEPIQ  213 (426)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC
T ss_conf             62389985388733035443202672120067879677433578521155888789999972757788868999950403


Q ss_pred             C---EEECCEE------EECCCCCCEEEEEECCHHHHCC-----CCCCC--C--EEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf             0---2203203------5025686148864011011025-----45568--5--79997001200176651544567788
Q gi|254780153|r  149 G---VCVPDVG------FIPESREGLVICDATSAVFARH-----IDFNK--L--DVVTFSAQKVLGGEAGFGIIILSPAS  210 (391)
Q Consensus       149 G---v~~~~~~------~~~~~~~~llivD~vSs~g~~p-----~d~~~--i--Dv~~a~sQK~l~~ppGl~~v~~s~~a  210 (391)
                      |   |..|...      .+|.++++|+|+|=|++=.++-     .|+++  +  |++.-  .|+|+|  |+-+|..-   
T Consensus       214 GEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~PDi~lL--GKALsG--Gv~PiSa~---  286 (426)
T TIGR01885       214 GEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGRTGKLLACDHENAEVKPDIVLL--GKALSG--GVYPISAV---  286 (426)
T ss_pred             CCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCEEE--EHHHCC--CCCCEEEE---
T ss_conf             54436848963578999986551872898200038402545331010588204503351--123458--94622436---


Q ss_pred             HHHHHHCCCCCCCCCHHHCCHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8765411445778312320011232103-347864466644889999999986201031899999999779999999874
Q gi|254780153|r  211 VERLEKYVPSWPLPKIFRMVKGGRVMEG-LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE  289 (391)
Q Consensus       211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~  289 (391)
                             -....   .|.-..     .+ ..+++|+.==|.. -.+.-++|+-+++|    +.-+|..++...+.+.+.+
T Consensus       287 -------la~~d---im~vl~-----PGPF~HGSTfGGNPLA-cavaiAaLeVL~~e----kL~~~A~~lG~~f~~~L~~  346 (426)
T TIGR01885       287 -------LADDD---IMSVLK-----PGPFEHGSTFGGNPLA-CAVAIAALEVLEEE----KLAERADQLGDMFLDELKQ  346 (426)
T ss_pred             -------EECCC---EEECCC-----CCCCCCCCCCCCCHHH-HHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHH
T ss_conf             -------66464---012117-----6486567768875789-99999999987404----5068898832899999998


Q ss_pred             CCCCCC-CCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHH
Q ss_conf             797167-66882003653178-98247310113734567888999998886282872665-5676750568615888999
Q gi|254780153|r  290 NDWIEN-LAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKE  366 (391)
Q Consensus       290 ~~~~~~-~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~  366 (391)
                      ..--++ .+  .+.|+....+ +.+.+......       ..-++. ..-++++++--.- |   .+.+|+.-==.|+.|
T Consensus       347 l~~~S~dvv--~EVRGkGLL~AIe~~~~ka~~~-------~~w~~C-l~~k~~GLlak~~nh---d~~IR~aPPL~i~~E  413 (426)
T TIGR01885       347 LARESPDVV--KEVRGKGLLIAIEFKENKADEI-------GAWDVC-LRLKENGLLAKPTNH---DKIIRLAPPLVITKE  413 (426)
T ss_pred             HHHHCCCCE--EHHCCCCCEEEEEEECCCCCCC-------CHHHHH-HHHHCCCCEECCCCC---CCEEEECCCCCCCHH
T ss_conf             875076400--0115672168888506533326-------466887-885207421013358---706871788526389


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780153|r  367 DLLLLCDWLR  376 (391)
Q Consensus       367 dv~~L~~aLe  376 (391)
                      |++.-++.|.
T Consensus       414 ~L~~~ie~i~  423 (426)
T TIGR01885       414 QLDEVIEIIR  423 (426)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999986


No 262
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=98.70  E-value=2.3e-06  Score=59.85  Aligned_cols=213  Identities=15%  Similarity=0.043  Sum_probs=134.4

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEECCC-
Q ss_conf             999999999999996889985799974873489998753205789707997-073688888765323876306740577-
Q gi|254780153|r   47 KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTAPY-  124 (391)
Q Consensus        47 ~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~~~-  124 (391)
                      ..+++++++.+.++|+...   .+|+.+|.|.++-++++.++++|+++++. |..-|-   -......+...+.+...+ 
T Consensus        58 ~g~I~eAq~laA~~~ga~~---s~flvnGsT~g~~a~i~a~~~~gd~vlv~RN~HkSv---~~gl~l~g~~Pvyl~p~~~  131 (294)
T cd00615          58 TGPIKEAQELAARAFGAKH---TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSV---INGLVLSGAVPVYLKPERN  131 (294)
T ss_pred             CCHHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHH---HHHHHHCCCEEEEEECCCC
T ss_conf             7199999999999839996---699827726999999998328999899826518999---9999986984899606435


Q ss_pred             ---CC--CCCHHHCC-------CCCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH--HHHCC-CC----CCC
Q ss_conf             ---76--57867678-------55657997420242022032035--0256861488640110--11025-45----568
Q gi|254780153|r  125 ---GS--LPDFSKVD-------FDRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA--VFARH-ID----FNK  183 (391)
Q Consensus       125 ---g~--~~~~~~~~-------~~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs--~g~~p-~d----~~~  183 (391)
                         |.  .++.++++       ..+ .+++-+-|=.|+..++..+  +++.++.+++||.-=.  ++-.| ++    ..+
T Consensus       132 ~~~gi~~~i~~~~~~~al~~~p~~k-av~lt~PtY~G~~~Dl~~i~~~~h~~~~~llVDEAhGah~~F~~~lp~~a~~~G  210 (294)
T cd00615         132 PYYGIAGGIPPETFKKALIEHPDAK-AAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG  210 (294)
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCC-EEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCHHHCC
T ss_conf             5569538999999999998589965-899977998877668999999984049979997754034431877875566669


Q ss_pred             CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             57999700120017665154456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r  184 LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL  263 (391)
Q Consensus       184 iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i  263 (391)
                      .|+++.|.+|-|++-..-+++-++.+.+...           -  +......      .|| -.|+-.++..+..+-.++
T Consensus       211 AD~vv~S~HKtL~altQ~s~lh~~~~~v~~~-----------~--l~~~l~~------~qT-TSPSYllmASlD~ar~~~  270 (294)
T cd00615         211 ADIVVQSTHKTLPALTQGSMIHVKGDLVNPD-----------R--VNEALNL------HQS-TSPSYLILASLDVARAMM  270 (294)
T ss_pred             CEEEEECHHHCCCCCCHHHHEEECCCCCCHH-----------H--HHHHHHH------HCC-CCHHHHHHHHHHHHHHHH
T ss_conf             6399962321453322253202379968999-----------9--9999998------838-875899999999999999


Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             0103189999999977999999987
Q gi|254780153|r  264 KKMGGLSACVERCNANAAVLFQFIQ  288 (391)
Q Consensus       264 ~~~gGl~~~~~r~~~~a~~l~~~i~  288 (391)
                      .++ | +..+.+.-+.+..+++.|.
T Consensus       271 ~~~-G-~~l~~~~l~~a~~~R~~i~  293 (294)
T cd00615         271 ALE-G-KELVEELIELALYARQEIN  293 (294)
T ss_pred             HHH-H-HHHHHHHHHHHHHHHHHHC
T ss_conf             999-9-9999999999999999965


No 263
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase; InterPro: IPR011282   This entry represents a narrowly defined clade of animal and bacterial (almost exclusively proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homologue from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.; GO: 0008890 glycine C-acetyltransferase activity.
Probab=98.69  E-value=2.3e-06  Score=59.85  Aligned_cols=305  Identities=18%  Similarity=0.169  Sum_probs=194.1

Q ss_pred             CCCCCCHHHHHHHHHHHCCC----CCCCCHH----HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf             87768968999986321036----5328988----999999999999999688998579997487348999875320578
Q gi|254780153|r   19 GPCAKRPGWSLGILEGALLG----RSHRCVL----GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGY   90 (391)
Q Consensus        19 GP~~~~p~~v~~~~~~~~l~----~sHRs~~----f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~   90 (391)
                      |=+. ||+ |++|...+|=+    .|  |-.    -++++++..+.|.++|++.|  .++ . +|.-=|+-...=.|+++
T Consensus        52 GLs~-HP~-~I~AA~~Al~~~GfGls--SVRFICGTQd~HK~LE~~iA~F~~~ED--tIL-Y-~scFDANgGlFE~LLg~  123 (395)
T TIGR01822        52 GLSD-HPD-VIQAAKDALDEHGFGLS--SVRFICGTQDLHKELEAKIAAFLGTED--TIL-Y-ASCFDANGGLFETLLGE  123 (395)
T ss_pred             CCCC-CHH-HHHHHHHHHHHCCCCEE--EEEEECCCCHHHHHHHHHHHHHHCCCC--HHH-H-HHHHHCCCCCCHHHCCC
T ss_conf             6467-557-99999998874389513--432121674356899999999716530--445-4-56663055422010475


Q ss_pred             CCEEEEEE-CC----HHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCCC--CCEEEEE--EECCCCEEECCEEE
Q ss_conf             97079970-73----68888876532387630674057776578676----7855--6579974--20242022032035
Q gi|254780153|r   91 RGVDVLAW-ES----FGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDFD--RDVVFVW--NGTTSGVCVPDVGF  157 (391)
Q Consensus        91 ~~~~~~~~-g~----~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~--~~v~~~h--~ETstGv~~~~~~~  157 (391)
                      +|+++... ++    =|-| ...++++...+.+        ..+++.    .+..  ....++-  .=+-.|..-|..++
T Consensus       124 eDAiiSDaLNHASIIDGvR-LCKAkrYRY~~~d--------m~dLe~~L~~A~~~Gar~~Li~tDGvFSMDG~iA~L~~i  194 (395)
T TIGR01822       124 EDAIISDALNHASIIDGVR-LCKAKRYRYANND--------MADLEAQLKEAQAAGARHRLIATDGVFSMDGTIAPLDEI  194 (395)
T ss_pred             CCCCHHHHHCCCHHHHHHH-HHHHHHHHHHCCC--------HHHHHHHHHHHHHCCCCEEEEEECCEEECCCCEECHHHH
T ss_conf             4422102224310230035-4223343230588--------889999999999738958998646602068731076789


Q ss_pred             --ECCCCCCEEEEEECCHHH--------HCC-CC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCC
Q ss_conf             --025686148864011011--------025-45-568579997001200176651544567788876541144577831
Q gi|254780153|r  158 --IPESREGLVICDATSAVF--------ARH-ID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPK  225 (391)
Q Consensus       158 --~~~~~~~llivD~vSs~g--------~~p-~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~  225 (391)
                        ++.++++|+.||=.=+.|        +.+ .| ++++|++-..-.|+|||-.| |+...+++.++-+.+.  ++||  
T Consensus       195 ~~LA~~Y~ALv~~DecHA~GflG~~GRG~~E~~gv~g~vdI~tgTLGKAlGGA~G-GfTta~~evv~lLRQR--sRPY--  269 (395)
T TIGR01822       195 CDLADKYDALVMVDECHATGFLGATGRGTAELLGVMGRVDIITGTLGKALGGASG-GFTTARKEVVELLRQR--SRPY--  269 (395)
T ss_pred             HHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHCCCCC-CCCCCCHHHHHHHHHC--CCCC--
T ss_conf             9999855987887443342332789986142137675257740543345114567-6437746799985312--6511--


Q ss_pred             HHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             23200112321033478644666448899999999862010318999999997799999998747971676688200365
Q gi|254780153|r  226 IFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSN  305 (391)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~  305 (391)
                      .|+                 ||-|=..|-+-.++|+.+++   =..+..+-.++.+.+|+.+++.+ |..   +|.. ++
T Consensus       270 LFS-----------------NslpP~vvga~~~vl~~l~~---s~~l~~~L~~n~~~FR~~m~AaG-Fd~---~p~~-hp  324 (395)
T TIGR01822       270 LFS-----------------NSLPPAVVGASIKVLDMLEG---SNELRDRLAENTRYFRERMEAAG-FDV---KPAE-HP  324 (395)
T ss_pred             CHH-----------------CCCCHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHCC-CCC---CCCC-CC
T ss_conf             000-----------------46306899999999999842---05799999999998787534247-401---7898-85


Q ss_pred             CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             3178982473101137345678889999988862828726655676750---5686158889999999999999999999
Q gi|254780153|r  306 TSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       306 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                       +.++-+           .++.....+...|.++|+.+=-=-|+-+|||   ||+=+--..++|++++-++|--.+-.+.
T Consensus       325 -I~pvMl-----------yDA~~Aq~~A~~Ll~~GiYv~GFfYPVVPKGqARIRvQ~SA~H~~e~l~~a~~AF~~~G~~l  392 (395)
T TIGR01822       325 -IIPVML-----------YDAKLAQRFAERLLEEGIYVIGFFYPVVPKGQARIRVQISAVHTEEQLDRAVEAFTRVGREL  392 (395)
T ss_pred             -CEEEEC-----------CCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             -102321-----------14789999999998779289974526437886124441025689889999999999987862


No 264
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.68  E-value=3.7e-05  Score=52.22  Aligned_cols=299  Identities=16%  Similarity=0.062  Sum_probs=156.2

Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHCCCCCCC-C--HHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf             8868887768-9689999863210365328-9--889999999999999996889-98579997487348999875320-
Q gi|254780153|r   14 PFFSSGPCAK-RPGWSLGILEGALLGRSHR-C--VLGKERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALWSL-   87 (391)
Q Consensus        14 ~~F~pGP~~~-~p~~v~~~~~~~~l~~sHR-s--~~f~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~nl-   87 (391)
                      .+|+-|=-.. .|..+++++.... + .|+ +  .=..++-+.+.+.+++-++.+ .+-+-++++.|++.++..+...+ 
T Consensus        24 I~L~iG~Pd~p~p~~i~~a~~~a~-~-~~~Y~~~~G~~eLReaia~~~~~~~g~~~~~~~~I~vt~G~~~al~~l~~~l~  101 (357)
T TIGR03539        24 VDLSVGTPVDPVPPLIRAALAAAA-D-APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLG  101 (357)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHH-C-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH
T ss_conf             888799999998999999999712-4-79989984779999999999999719997995759986887999999999970


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEECCEE-----EECC
Q ss_conf             57897079970736888887653238763067405777657867678--5565799742024202203203-----5025
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVPDVG-----FIPE  160 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~~~~-----~~~~  160 (391)
                      +++||.+++-.=.|...  ....+..+..+...+       +++++.  ..+.+.++.=..-||...+..+     .+|+
T Consensus       102 ~~pGD~Vli~~P~y~~y--~~~~~~~g~~~v~~d-------~~~~~~~~~~k~i~l~~P~NPTG~v~s~~~l~~l~~~a~  172 (357)
T TIGR03539       102 LGPGDTVVIPELAYPTY--EVGALLAGATPVAAD-------DPTELDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWAR  172 (357)
T ss_pred             CCCCCEEEECCCCCCCH--HHHHHHCCCEEEECC-------CHHHCCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHCC
T ss_conf             79999899788877008--999998599898238-------866679778549998999896232082889999987320


Q ss_pred             CCCCEEEEEECCHH---HHCCCC--------CCCCE-EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             68614886401101---102545--------56857-999700120017665--15445677888765411445778312
Q gi|254780153|r  161 SREGLVICDATSAV---FARHID--------FNKLD-VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       161 ~~~~llivD~vSs~---g~~p~d--------~~~iD-v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
                      .++.++|.|-+=+-   .+.+..        .+.-. +++.|.-|.++ .||  +|.++.+++.+++......       
T Consensus       173 ~~~i~visDEiY~~~~~~~~~~s~l~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~~~~li~~l~~~~~-------  244 (357)
T TIGR03539       173 ERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSN-LAGYRAGFVAGDPALVAELLTVRK-------  244 (357)
T ss_pred             CCEEEEECHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCC-CCCCEEEEEECCHHHHHHHHHHHH-------
T ss_conf             555899523324765358988430286453767576799961531004-556128999679999999999998-------


Q ss_pred             HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT  306 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~  306 (391)
                                     .....+|. ..-.++..+++   +.+=+....++++++...+.+.++..+ +....  +    ..
T Consensus       245 ---------------~~~~~~~~-~~q~a~~~al~---~~~~~~~~~~~~~~rr~~l~~~L~~~g-~~~~~--p----~g  298 (357)
T TIGR03539       245 ---------------HAGLMVPA-PVQAAMVAALG---DDGHVAEQKARYAARRAQLKPALEKAG-FRIDH--S----EA  298 (357)
T ss_pred             ---------------HCCCCCCH-HHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC--C----CE
T ss_conf             ---------------56777889-99999999956---927899999999999999999998579-77626--8----80


Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHH
Q ss_conf             17898247310113734567888999998886282872665-5676750-5686158889999999
Q gi|254780153|r  307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLL  370 (391)
Q Consensus       307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~  370 (391)
                      ...+-...+.    +       .......|.++|+++--|- +...+++ +||+.-.  +++.++.
T Consensus       299 ~~y~~~~~~~----~-------~~~~~~~l~e~gV~v~PG~~Fg~~g~~~vRis~~~--~~e~l~e  351 (357)
T TIGR03539       299 GLYLWATRGE----D-------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA--TDERIAA  351 (357)
T ss_pred             EEEEEEECCC----C-------HHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECC--CHHHHHH
T ss_conf             6999875899----9-------99999999969989947874478999979999729--9999999


No 265
>TIGR01326 OAH_OAS_sulfhy O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; InterPro: IPR006235   This family of sequences is a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine sulfhydrylase (OAH, 2.5.1.49 from EC) and O-acetylserine sulfhydrylase (OAS, 2.5.1.47 from EC). An alternate name for OAH sulfhydrylase is homocysteine synthase.; GO: 0016765 transferase activity transferring alkyl or aryl (other than methyl) groups, 0006520 amino acid metabolic process.
Probab=98.65  E-value=2.4e-07  Score=66.13  Aligned_cols=219  Identities=18%  Similarity=0.130  Sum_probs=126.0

Q ss_pred             HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE---ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC
Q ss_conf             9996889985799974873489998753205789707997---0736888887653238763067405777657867678
Q gi|254780153|r   58 RKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA---WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD  134 (391)
Q Consensus        58 ~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~---~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  134 (391)
                      +++-.+.-.--. +...||+.|.-.++.|+.+-||.++.+   +|+=..-+..-++++| ++++..+.+.    ++++++
T Consensus        64 ~RiAALEGGvaa-l~~ASG~AA~~~Ailnla~AGDnIVsS~~LYGGTynLF~~TlkrlG-IevrFvd~dd----~pe~~~  137 (434)
T TIGR01326        64 QRIAALEGGVAA-LAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG-IEVRFVDGDD----DPEELE  137 (434)
T ss_pred             HHHHHHCCCEEE-HHHCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCC-EEEEEECCCC----CHHHHH
T ss_conf             888642155000-2101157999999999972698269806444225789999555448-1488727888----878999


Q ss_pred             CC--CCEEEEEEECCCCEEECCEE--------EECCCC--CCEEEEEEC--CH-HHHCCCCCCCCEEEEECCHHCCCCCC
Q ss_conf             55--65799742024202203203--------502568--614886401--10-11025455685799970012001766
Q gi|254780153|r  135 FD--RDVVFVWNGTTSGVCVPDVG--------FIPESR--EGLVICDAT--SA-VFARHIDFNKLDVVTFSAQKVLGGEA  199 (391)
Q Consensus       135 ~~--~~v~~~h~ETstGv~~~~~~--------~~~~~~--~~llivD~v--Ss-~g~~p~d~~~iDv~~a~sQK~l~~pp  199 (391)
                      ..  ..--.+..||.   -||...        .++|++  ++++|||=|  +. +.++||+ -++|+|+-|.=|.|||- 
T Consensus       138 k~id~nTKAvf~EtI---gNP~~~v~Die~~a~~Ah~~PhgvPliVDNT~atpGYL~rPi~-hGADIVvhSaTK~iGGH-  212 (434)
T TIGR01326       138 KAIDENTKAVFAETI---GNPALNVPDIEAVAEVAHAHPHGVPLIVDNTFATPGYLCRPID-HGADIVVHSATKYIGGH-  212 (434)
T ss_pred             HHCCCCCEEEEEECC---CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHH-CCCCEEEEEECCCCCCC-
T ss_conf             760667518984012---3877676785899999986789834887478687641006456-49867996100101263-


Q ss_pred             CCEEEEE---CHHHHHHHHHCCCCCCCCCHHHCCHH------HHHHCCCCCCCCCCCCCHHHHHHHHHHHH---------
Q ss_conf             5154456---77888765411445778312320011------23210334786446664488999999998---------
Q gi|254780153|r  200 GFGIIIL---SPASVERLEKYVPSWPLPKIFRMVKG------GRVMEGLFCGETINTPSLLCIEDYIDALL---------  261 (391)
Q Consensus       200 Gl~~v~~---s~~al~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~TP~v~~i~al~~~l~---------  261 (391)
                      |.++=-+   |-+--+    +....  -+|..+...      .++.+...++.-...++  ..|.++....         
T Consensus       213 G~aiGG~ivD~G~Fnd----W~~~~--gkFP~f~~PdpsYHGl~f~E~~g~~~~~G~~~--~Afi~~~Rv~~LRD~Gaa~  284 (434)
T TIGR01326       213 GTAIGGVIVDGGKFND----WANNP--GKFPLFTTPDPSYHGLVFTETFGEFEGLGLGN--IAFIVKARVQLLRDLGAAL  284 (434)
T ss_pred             EEEEEEEEEECCCCCC----CCCCC--CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC--HHEEEEEEEEECHHCCCCC
T ss_conf             1465047882675563----01478--74777888888658712653155757778500--0003444674221003340


Q ss_pred             -----HHHCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             -----62010--31899999999779999999874797167
Q gi|254780153|r  262 -----WLKKM--GGLSACVERCNANAAVLFQFIQENDWIEN  295 (391)
Q Consensus       262 -----~i~~~--gGl~~~~~r~~~~a~~l~~~i~~~~~~~~  295 (391)
                           |+..+  +.|.=|.+||.+||..+-+||++++-...
T Consensus       285 sPFnAFLllQGLETLsLR~ERH~~NA~kVA~fL~~Hp~V~w  325 (434)
T TIGR01326       285 SPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAW  325 (434)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             17899999986667876788888999999999727884451


No 266
>KOG1404 consensus
Probab=98.63  E-value=4.3e-05  Score=51.78  Aligned_cols=327  Identities=14%  Similarity=0.078  Sum_probs=179.3

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---CCCCCEEEEEEC
Q ss_conf             96899998632103653289889-99999999999999688998579997487348999875320---578970799707
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---LGYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~~~~~~~~~~~g   99 (391)
                      +|+ |.+++..++.-..|-+.-| .+-+.+.-+.|...  .|++-.++|+..||+.|.|.+++=.   -+.-+.+-..++
T Consensus        68 hP~-v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~--~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~  144 (442)
T KOG1404          68 HPD-VVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSK--LPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNS  144 (442)
T ss_pred             CHH-HHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH--CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             847-8999998645328730121487089999999986--8877128999558745889999999986297158875055


Q ss_pred             CHHHHHHHHHHHCC------CC----------CEEEEECCCCCC----------CCHHH---CCCCCCEEEEEEECCCCE
Q ss_conf             36888887653238------76----------306740577765----------78676---785565799742024202
Q gi|254780153|r  100 SFGLGWMSDIRQLS------LQ----------DVREFTAPYGSL----------PDFSK---VDFDRDVVFVWNGTTSGV  150 (391)
Q Consensus       100 ~~~~r~~~~~~~~~------~~----------~~~~~~~~~g~~----------~~~~~---~~~~~~v~~~h~ETstGv  150 (391)
                      +.|.-.........      ..          +.+....+++-.          ..+++   .+....++-.-.||..|+
T Consensus       145 YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGv  224 (442)
T KOG1404         145 YHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGV  224 (442)
T ss_pred             CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCC
T ss_conf             36773553024467764556788877651268998311567997324568888887778887358775147875300167


Q ss_pred             EECC---------EEEECCCCCCEEEEEECCHHHHCCCCCCCC---EE--EEECCHHCCCCCCCCEEEEECHHHHHHHHH
Q ss_conf             2032---------035025686148864011011025455685---79--997001200176651544567788876541
Q gi|254780153|r  151 CVPD---------VGFIPESREGLVICDATSAVFARHIDFNKL---DV--VTFSAQKVLGGEAGFGIIILSPASVERLEK  216 (391)
Q Consensus       151 ~~~~---------~~~~~~~~~~llivD~vSs~g~~p~d~~~i---Dv--~~a~sQK~l~~ppGl~~v~~s~~al~~~~~  216 (391)
                      -.-+         ...++++++.++|+|=+.+-.++-=.+|++   |+  .+-.--|+||.--=++.|+.+++--+...+
T Consensus       225 gG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~  304 (442)
T KOG1404         225 GGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQ  304 (442)
T ss_pred             CCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHH
T ss_conf             75313881189999999997597898543443645552510100168772099998652488700256327899999985


Q ss_pred             CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r  217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL  296 (391)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~  296 (391)
                      ...                     ...|+.--|+..- +-.++|+-+++    +++.++.++....+.+.+.+..--.+.
T Consensus       305 ~~~---------------------~fnTyggnP~a~a-vg~aVL~Vike----e~LqE~aa~vG~yl~~~l~~l~d~h~i  358 (442)
T KOG1404         305 KSS---------------------HFNTYGGNPVACA-VGLAVLKVIKE----ENLQENAAEVGSYLLEKLAALKDKHPI  358 (442)
T ss_pred             CCC---------------------CCCCCCCCCHHHH-HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             213---------------------5203378825678-88999999988----767888999999999999987414873


Q ss_pred             CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             68820036531789824731011373456788899999888628287266556767505686158889999999999999
Q gi|254780153|r  297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      +.|-.-|..+.-+=.+.|..-  . .......-..+...+++.|+.++.++.  .|..|||.--=-++.+|++.+.++.+
T Consensus       359 IGdVRG~GLm~GvE~V~dk~~--~-~pp~~~~~~~i~~~cke~Gvlvg~g~i--~G~vfriaPPlciT~edi~f~~~~~~  433 (442)
T KOG1404         359 IGDVRGRGLMLGVELVSDKSE--P-KPPATAEGAVIGEQCKELGVLVGKGGI--HGNVFRIAPPLCITKEDIDFAVEYFE  433 (442)
T ss_pred             EEECCCCEEEEEEEEECCCCC--C-CCCCHHHHHHHHHHHHHHCEEEECCCC--CCEEEEECCCEECCHHHHHHHHHHHH
T ss_conf             552135414888887226677--8-894067788998998974856410423--23179836985434899889999998


Q ss_pred             HHHHHHHHH
Q ss_conf             999999998
Q gi|254780153|r  377 WVFYFQKIS  385 (391)
Q Consensus       377 ~~~~~~k~~  385 (391)
                       ++...+.+
T Consensus       434 -~~~~~~~~  441 (442)
T KOG1404         434 -VLTSTVAQ  441 (442)
T ss_pred             -HHHHHHHC
T ss_conf             -88677533


No 267
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.60  E-value=1.9e-05  Score=54.05  Aligned_cols=285  Identities=20%  Similarity=0.168  Sum_probs=146.8

Q ss_pred             EEECCCCHHHHHHHHHHCCCCCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC--CCCEEEEEE
Q ss_conf             99748734899987532057897079970---7368888876532387630674057776578676785--565799742
Q gi|254780153|r   70 AIVPASDTGAVEMALWSLLGYRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF--DRDVVFVWN  144 (391)
Q Consensus        70 ~~l~GsgT~~~ea~~~nl~~~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~v~~~h~  144 (391)
                      .+-.+||..+...++.|+.+.||.++...   |+-..-+...+.+++ .++...+.+.     ++.++.  ...--.+..
T Consensus        80 a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~G-i~v~fvd~~d-----~~~~~~aI~~nTkavf~  153 (426)
T COG2873          80 ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLG-IEVRFVDPDD-----PENFEAAIDENTKAVFA  153 (426)
T ss_pred             HHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC-CEEEEECCCC-----HHHHHHHHCCCCCEEEE
T ss_conf             13331335899999998645887067513233754889998888648-1799927999-----89999873822406878


Q ss_pred             ECCC---CEEECCEE--EECCCCCCEEEEEECCH--HHHCCCCCCCCEEEEECCHHCCCCCCCCEE--EEECHHHHHHHH
Q ss_conf             0242---02203203--50256861488640110--110254556857999700120017665154--456778887654
Q gi|254780153|r  145 GTTS---GVCVPDVG--FIPESREGLVICDATSA--VFARHIDFNKLDVVTFSAQKVLGGEAGFGI--IILSPASVERLE  215 (391)
Q Consensus       145 ETst---Gv~~~~~~--~~~~~~~~llivD~vSs--~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~--v~~s~~al~~~~  215 (391)
                      ||.-   +...+++.  .++|+++.++|||-+-+  ...+|++ -+.|+++-|.-|.+||- |.++  +++----    .
T Consensus       154 EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~-hGADIVvHS~TK~igGh-Gt~iGG~iVD~G~----F  227 (426)
T COG2873         154 ETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIE-HGADIVVHSATKYIGGH-GTAIGGVIVDGGK----F  227 (426)
T ss_pred             EECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEECCHHH-CCCCEEEEEECCCCCCC-CCCCCEEEEECCC----C
T ss_conf             7516887663577999999987599389836777300436656-18877998603012677-6542407986775----4


Q ss_pred             HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH-----------HHHCC--CCHHHHHHHHHHHHHH
Q ss_conf             1144577831232001123210334786446664488999999998-----------62010--3189999999977999
Q gi|254780153|r  216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL-----------WLKKM--GGLSACVERCNANAAV  282 (391)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~-----------~i~~~--gGl~~~~~r~~~~a~~  282 (391)
                      .+..+.   +|..+......+ .....---+.++.+.+.+-.+-|+           |...+  +.|.=|.+||-+++..
T Consensus       228 Dw~~~~---rfP~~~~p~p~Y-hGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~  303 (426)
T COG2873         228 DWTANG---RFPEFTTPDPSY-HGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALK  303 (426)
T ss_pred             CCCCCC---CCCCCCCCCCCC-CCEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf             554577---786667898442-5543254224078999999988875165569378899983433667789998776999


Q ss_pred             HHHHHHHCCCCCCC-----CCCCCC---------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-
Q ss_conf             99998747971676-----688200---------365317898247310113734567888999998886282872665-
Q gi|254780153|r  283 LFQFIQENDWIENL-----AVDETT---------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-  347 (391)
Q Consensus       283 l~~~i~~~~~~~~~-----~~~~~~---------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-  347 (391)
                      +-+|+++++.....     ...+.+         ..-.+.+|.+.+..      +...+++..+.-...-.|+. |.+- 
T Consensus       304 vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~gavltF~~kgg~------ea~~~fi~~l~L~s~laNvG-D~rsL  376 (426)
T COG2873         304 VAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGY------EAGKKFIDALKLFSHLANIG-DARSL  376 (426)
T ss_pred             HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCHH------HHHHHHHHHHHHHHHHCCCC-CCCEE
T ss_conf             999986099710342799888943577986364786438998706718------99999999999998603546-56427


Q ss_pred             --------CCC--------CC---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             --------567--------67---50568615888999999999999999999
Q gi|254780153|r  348 --------YRD--------AP---LGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       348 --------~r~--------~~---~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                              |+.        +|   ..+|+|++=    ||++.++.=||.|+..
T Consensus       377 vIHPAsTTH~ql~eee~~~aGvt~~~IRlSVGI----Ed~~DiiaDl~qAl~~  425 (426)
T COG2873         377 VIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI----EDIDDIIADLEQALEA  425 (426)
T ss_pred             EECCCCCHHHHCCHHHHHHCCCCCCCEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf             766774012206999998469987837998456----8789999989999851


No 268
>PRK12414 putative aminotransferase; Provisional
Probab=98.60  E-value=6.4e-05  Score=50.66  Aligned_cols=319  Identities=11%  Similarity=0.041  Sum_probs=168.5

Q ss_pred             CCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCC-CCH--HHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHH
Q ss_conf             8998886888776-8968999986321036532-898--8999999999999999688998--57999748734899987
Q gi|254780153|r   10 KPKRPFFSSGPCA-KRPGWSLGILEGALLGRSH-RCV--LGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMA   83 (391)
Q Consensus        10 ~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~sH-Rs~--~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~   83 (391)
                      .++-.||+-|=-. -+|..+++++.+.+..-.| =++  =..++-+.+.+.+++.+++.-+  -+| +++.|++.++..+
T Consensus        28 ~~dvI~l~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~dp~~~i-~vt~G~~~al~~~  106 (384)
T PRK12414         28 QHDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPDTEV-TVIASASEGLYAA  106 (384)
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHH
T ss_conf             899688189899999989999999999961999898998719999999999999968999988809-9847989999999


Q ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-
Q ss_conf             5320578970799707368888876532387630674057776578676785-----5657997420242022032035-
Q gi|254780153|r   84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-  157 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-  157 (391)
                      ++-|+++||.+++.+=.|..- ...+...+...+.+...+.+..++.++++.     .+.+.++.-..-||...+..+. 
T Consensus       107 ~~al~~pGD~Vlv~~P~y~~y-~~~~~~~Ga~~v~v~~~~~~~~~d~~~l~~~~~~~tk~iil~~P~NPTG~v~s~e~l~  185 (384)
T PRK12414        107 ISALVHPGDEVIYFEPSFDSY-APIVRLQGATPVAIKLSPEHFRVNWDEVAAAITPRTRMIIVNTPHNPTATVFSEADLA  185 (384)
T ss_pred             HHHHCCCCCEEEEECCCCHHH-HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHH
T ss_conf             999679999899908970656-9999985998999866855688899999962777866999799989877137566699


Q ss_pred             ----ECCCCCCEEEEEECCH---HHHCC-CCC------CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCC
Q ss_conf             ----0256861488640110---11025-455------68579997001200176651--54456778887654114457
Q gi|254780153|r  158 ----IPESREGLVICDATSA---VFARH-IDF------NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSW  221 (391)
Q Consensus       158 ----~~~~~~~llivD~vSs---~g~~p-~d~------~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~  221 (391)
                          ++..++.++|.|-+=+   +.+.+ ...      .+--+.+.|.-|.++ .||+  |.++..++.++++...+.  
T Consensus       186 ~l~~la~~~~i~ii~DE~Y~~l~f~g~~~~s~~~~~~~~~~~I~i~S~SK~~~-~~G~RvG~~v~p~~li~~~~~~~~--  262 (384)
T PRK12414        186 RLAQLTRGTDIVVLSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYH-VTGWRVGYCLAPAELMDEIRKVHQ--  262 (384)
T ss_pred             HHHHHHHHCCEEEEECCCHHHEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCC-CCCCEEEEEEECHHHHHHHHHHHH--
T ss_conf             99998751588999666323303178777664315120113323567750000-265127999848999999999997--


Q ss_pred             CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r  222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET  301 (391)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~  301 (391)
                                           .+...+++..=++...+|..   ......+.+.++++.+.+.+.+...+ +.....+  
T Consensus       263 ---------------------~~~~~~~~~~Q~a~~~~l~~---~~~~~~~~~~y~~rrd~l~~~L~~~~-~~~~~p~--  315 (384)
T PRK12414        263 ---------------------FMVFSADTPMQYAFAEALAR---PASYLGLSAFYQRKRDLLARELADSR-FELLPSE--  315 (384)
T ss_pred             ---------------------HCCCCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC--
T ss_conf             ---------------------56578678999999999829---82499999999999999999767569-8787898--


Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCC--C-EEEEECCCCCCHHHHHHHHH
Q ss_conf             036531789824731011373456788899999-8886282872665-56767--5-05686158889999999999
Q gi|254780153|r  302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAP--L-GLRVWVGVTVEKEDLLLLCD  373 (391)
Q Consensus       302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~--~-~~RIg~~g~i~~~dv~~L~~  373 (391)
                        +..-+-.++..  ..   ...+    .++.. ++.+.|+++--|. ....|  . .+|++.-  .++++++.-++
T Consensus       316 --G~fy~~~~~~~--~~---~~~d----~~~~~~ll~e~gV~vvPG~~Fg~~g~~~g~iRlsfa--~~~e~l~eg~~  379 (384)
T PRK12414        316 --GSFFMLARFRH--FS---DESD----SDFVLRLIRDARVATIPLSAFYADGTDTGVIRLSFS--KDDATLVEGAR  379 (384)
T ss_pred             --CEEEEEEECCC--CC---CCCH----HHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEEC--CCHHHHHHHHH
T ss_conf             --07999997687--89---9999----999999998599999826321799998998999967--99999999999


No 269
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.58  E-value=7e-05  Score=50.41  Aligned_cols=315  Identities=15%  Similarity=0.108  Sum_probs=157.8

Q ss_pred             CCCCCC-CCCCCHHHHHHHHHHHCCCCCCCCHH--HHHHHHHHHHHHHHHHCCCC--C-CEEEEECCCCHHHHHHHHHHC
Q ss_conf             886888-77689689999863210365328988--99999999999999968899--8-579997487348999875320
Q gi|254780153|r   14 PFFSSG-PCAKRPGWSLGILEGALLGRSHRCVL--GKERINKAIQLTRKVLEVPE--N-YRIAIVPASDTGAVEMALWSL   87 (391)
Q Consensus        14 ~~F~pG-P~~~~p~~v~~~~~~~~l~~sHRs~~--f~~i~~~~~~~l~~l~~~p~--~-y~v~~l~GsgT~~~ea~~~nl   87 (391)
                      ++++-| |.--.|..+++++.+.+=+.+|=++.  ..++-+.+-+-+++-++.+.  | ..-++++.|++.++..++..+
T Consensus        32 I~L~iG~Pd~~~P~~v~ea~~~al~~~~~Y~~~~G~~~LReAia~~~~~~~~~~~~~dp~~~I~vt~Ga~~al~~~~~~l  111 (394)
T TIGR03538        32 IALSIGEPKHATPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAV  111 (394)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf             87848889999779999999998438889999988699999999999997398877896776998988899999999997


Q ss_pred             CCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf             5789707997-07368888876532387630674--057776578676785-----565799742024202203203---
Q gi|254780153|r   88 LGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG---  156 (391)
Q Consensus        88 ~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~---  156 (391)
                      +++||..++. -.-+..- ...+....+..+..+  ....+..+++++++.     .+.+.++.=..-||...+..+   
T Consensus       112 ~~pGd~~~V~~p~P~Y~~-y~~~~~~~g~~~~~v~~~~e~~~~~d~~~l~~~~~~~tk~iil~sP~NPTG~v~s~~~l~~  190 (394)
T TIGR03538       112 INPGQAPLVVMPNPFYQI-YEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLETLKK  190 (394)
T ss_pred             CCCCCCEEEEECCCCCCC-CHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf             299981089947886645-2999997599899758673458888999998745236659998899999897778799999


Q ss_pred             --EECCCCCCEEEEEECCHHHHC-----CC---------CCCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHH
Q ss_conf             --502568614886401101102-----54---------556857--9997001200176651--544567788876541
Q gi|254780153|r  157 --FIPESREGLVICDATSAVFAR-----HI---------DFNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEK  216 (391)
Q Consensus       157 --~~~~~~~~llivD~vSs~g~~-----p~---------d~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~  216 (391)
                        .+|.+++..+|.|-+=+-...     |.         .....+  +++.|.-|.++. ||+  |.++..++.+++...
T Consensus       191 l~~~a~~~~i~iisDE~Y~~l~~d~~~~p~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~~~~~~~i~~~~~  269 (394)
T TIGR03538       191 LIELADQYGFIIASDECYSELYFDEANPPAGLLQAAAALGRDDFRRCLVFHSLSKRSNL-PGLRSGFVAGDAEILKAFLR  269 (394)
T ss_pred             HHHHHHCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-CCCEEEEEECCHHHHHHHHH
T ss_conf             99997326769998068332785788897378777766254444767999556544454-67517999579999999998


Q ss_pred             CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r  217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL  296 (391)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~  296 (391)
                      .+.                      .....+| +..-++...++.   .+.-+....+.++++.+.+.+.+...  +...
T Consensus       270 ~~~----------------------~~~~~~~-~~~q~a~~aa~~---~~~~~~~~r~~~~~r~~~~~~~L~~~--~~~~  321 (394)
T TIGR03538       270 YRT----------------------YHGCAMP-PPTQLASIAAWN---DEQHVRENRALYREKFAAVLEILGPV--LDLE  321 (394)
T ss_pred             HCC----------------------CCCCCCC-HHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHCC--CCCC
T ss_conf             522----------------------3742689-999999999848---98999999999999999999986427--9625


Q ss_pred             CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--C-----CCCCCE-EEEECCCCCCHHHH
Q ss_conf             688200365317898247310113734567888999998886282872665--5-----676750-56861588899999
Q gi|254780153|r  297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--Y-----RDAPLG-LRVWVGVTVEKEDL  368 (391)
Q Consensus       297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~-----r~~~~~-~RIg~~g~i~~~dv  368 (391)
                        .|+  +..-+-.+++.      +   ...+   ...++.++|+++--|.  +     ...|.+ +|++...  +.+++
T Consensus       322 --~P~--Gg~y~w~~~~~------~---~~~f---~~~ll~e~gV~v~PG~~F~~~~~~~~~G~g~iR~s~~~--~~e~l  383 (394)
T TIGR03538       322 --LPD--AGFYLWPKVPG------D---DEAF---ARALYEEENVTVLPGRYLSREAEGVNPGAGRVRIALVA--PLEEC  383 (394)
T ss_pred             --CCC--EEEEEEEECCC------C---HHHH---HHHHHHHCCEEEECCHHHCCCCCCCCCCCCEEEEEECC--CHHHH
T ss_conf             --798--54899996899------9---9999---99999868999987734165545788899989999759--89999


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q gi|254780153|r  369 LLLCDWLR  376 (391)
Q Consensus       369 ~~L~~aLe  376 (391)
                      +.-++-|+
T Consensus       384 ~ea~~Rl~  391 (394)
T TIGR03538       384 VEAAERIR  391 (394)
T ss_pred             HHHHHHHH
T ss_conf             99999999


No 270
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.57  E-value=7.5e-05  Score=50.24  Aligned_cols=292  Identities=13%  Similarity=0.058  Sum_probs=143.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---CC-----C------CCEEEEEECCHHHHHH
Q ss_conf             28988999999999999999688998579997487348999875320---57-----8------9707997073688888
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---LG-----Y------RGVDVLAWESFGLGWM  106 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~~-----~------~~~~~~~~g~~~~r~~  106 (391)
                      +.+..+..-+.+..+.+.+++.-+.-..+ ++..||+.|+|+++.-.   ..     +      +..++...++|=++..
T Consensus        78 ~~~~~~~~~~~~l~~~l~~~~~~~~l~~v-~f~~sGsEAvE~AiKlA~~y~~r~~~~~~~~~~~~~kiis~~~syHG~T~  156 (431)
T TIGR03251        78 SNSDVYTVAMARFVDTFARVLGDPALPHL-FFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSG  156 (431)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCCCEE-EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEECCCCC
T ss_conf             66225569999999999985088777858-97586799999999999999764312345577776479997253659963


Q ss_pred             HHHHHCCCCCEE----------EEECCCC----CCCCHHH-----------C-----CCCCCEEEEEEECCCC---EEEC
Q ss_conf             765323876306----------7405777----6578676-----------7-----8556579974202420---2203
Q gi|254780153|r  107 SDIRQLSLQDVR----------EFTAPYG----SLPDFSK-----------V-----DFDRDVVFVWNGTTSG---VCVP  153 (391)
Q Consensus       107 ~~~~~~~~~~~~----------~~~~~~g----~~~~~~~-----------~-----~~~~~v~~~h~ETstG---v~~~  153 (391)
                      .-+.--+.....          ....|.-    .....+.           +     +....++.+-.|...|   +..+
T Consensus       157 gals~t~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAAvI~EPIqG~gG~~~~  236 (431)
T TIGR03251       157 YTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHF  236 (431)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
T ss_conf             33344368753357788778777779887688887650025556899999999999738995799996777677798568


Q ss_pred             C------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC
Q ss_conf             2------035025686148864011011025---4--55685--799970012001766515445677888765411445
Q gi|254780153|r  154 D------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS  220 (391)
Q Consensus       154 ~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~  220 (391)
                      .      .+.+|.++++|+|+|=|.+=.++-   +  +..++  |++  ..-|+++  .|  .+..+....+.....   
T Consensus       237 p~~yl~~lr~lc~~~giLLI~DEVqtGfGRtG~~fa~e~~gv~PDiv--~~gKgl~--~g--~~~~~~~~~~~~~~~---  307 (431)
T TIGR03251       237 RPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIV--AFGKKTQ--VC--GIMAGRRVDEVADNV---  307 (431)
T ss_pred             CHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCHHHHHCCCCCCEE--EECCCCC--CC--HHHHHHHHHHHHHHH---
T ss_conf             98999999999876275055341013677667744677507889989--8777223--55--188899999999986---


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCC
Q ss_conf             778312320011232103347864466644889999999986201031899999999779999999874797167-6688
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVD  299 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~  299 (391)
                              +      ......++|+.--|+.. .+..++|+.+++++    ..++.+++.+.+.+.++.+-.-.+ ++.+
T Consensus       308 --------~------~~~~~~~sT~~gnpla~-aaala~l~ii~~e~----l~~~v~~~g~~l~~~L~~l~~~~p~~V~d  368 (431)
T TIGR03251       308 --------F------AVPSRLNSTWGGNLVDM-VRATRILEIIEEER----LVDNARVQGAHLLARLHELAAEFPHLVSN  368 (431)
T ss_pred             --------H------CCCCCCCCCCCCCHHHH-HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             --------4------17877678888898999-99998899986246----99999999999999999998768782456


Q ss_pred             CCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             2003653178-982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r  300 ETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       300 ~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                        .|...... +.++++..           ...+...+.++|+++...+    .+++|+.--=.++.++++.+++.||.+
T Consensus       369 --VRG~GLm~giel~~~~~-----------~~~~~~~~~~~Gll~~~~g----~~~ir~~PPL~it~~eid~~~~~l~~V  431 (431)
T TIGR03251       369 --PRGRGLMCAFDLPSTAD-----------RDEVIRQLYREGVLLLGCG----ERSIRFRPPLTVTREEIDAAIDAIRRV  431 (431)
T ss_pred             --EEECCEEEEEECCCHHH-----------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf             --30133699998188167-----------9999999997893997479----998999889308899999999997269


No 271
>KOG0257 consensus
Probab=98.56  E-value=5.2e-05  Score=51.23  Aligned_cols=331  Identities=14%  Similarity=0.075  Sum_probs=176.7

Q ss_pred             CCCC-CCCCCHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCC---CCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             6888-77689689999863210----365328988999999999999999688---998579997487348999875320
Q gi|254780153|r   16 FSSG-PCAKRPGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEV---PENYRIAIVPASDTGAVEMALWSL   87 (391)
Q Consensus        16 F~pG-P~~~~p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~---p~~y~v~~l~GsgT~~~ea~~~nl   87 (391)
                      -+-| |.--+|+.|.++++...    ...+-|+.=..++.+-+.+.++++++.   |++ +| +++.||..++-.+++-+
T Consensus        36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~-eV-lVT~GA~~ai~~~~~~l  113 (420)
T KOG0257          36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDD-EV-LVTAGANEAISSALLGL  113 (420)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-CE-EEECCCHHHHHHHHHHH
T ss_conf             66788899974899999998742530022346679467899999998887355557866-57-99538237899999987


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCC------CCCHHHC-----CCCCCEEEEEEECCCCEEECCE
Q ss_conf             578970799707368888876532387630674-057776------5786767-----8556579974202420220320
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGS------LPDFSKV-----DFDRDVVFVWNGTTSGVCVPDV  155 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~------~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~  155 (391)
                      +++||.+++.-=.|-. -.....-.++..+-+. ...+|.      ..|.++.     +..+.+.++.=..-||-..+-.
T Consensus       114 ~~~GDeVii~eP~fd~-Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsRe  192 (420)
T KOG0257         114 LNPGDEVIVFEPFFDC-YIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSRE  192 (420)
T ss_pred             CCCCCEEEEECCCCHH-HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHH
T ss_conf             1899879993575122-456776448842440565344665576666896999864367764799948999867305799


Q ss_pred             -----EEECCCCCCEEEEEECCHHHHCC----------CCCCCCEEEEECCHHCCCCCCCCEE--EEECHHHHHHHHHCC
Q ss_conf             -----35025686148864011011025----------4556857999700120017665154--456778887654114
Q gi|254780153|r  156 -----GFIPESREGLVICDATSAVFARH----------IDFNKLDVVTFSAQKVLGGEAGFGI--IILSPASVERLEKYV  218 (391)
Q Consensus       156 -----~~~~~~~~~llivD~vSs~g~~p----------~d~~~iDv~~a~sQK~l~~ppGl~~--v~~s~~al~~~~~~~  218 (391)
                           ..+|.+++.++|.|-+=.....+          =++++.-+-+.|..|.++ -.|-=+  ++. ++.+-+.    
T Consensus       193 eLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~-~TGWrlGW~ig-p~~L~~~----  266 (420)
T KOG0257         193 ELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFG-VTGWRLGWAIG-PKHLYSA----  266 (420)
T ss_pred             HHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCEEEECCCCHHHEEEEECCCCCEEE-EEEEEEEEEEC-HHHHHHH----
T ss_conf             99999999987897999825747882178765146227762244788514521000-03456534645-4876464----


Q ss_pred             CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHH-HCCCC---HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             457783123200112321033478644666448899999999--862-01031---899999999779999999874797
Q gi|254780153|r  219 PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL--LWL-KKMGG---LSACVERCNANAAVLFQFIQENDW  292 (391)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l--~~i-~~~gG---l~~~~~r~~~~a~~l~~~i~~~~~  292 (391)
                                   ....     ..+.-+|-++....|...++  +|. +.-+|   +..+.+-++++.+.+-+.++.+ +
T Consensus       267 -------------~~~v-----h~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g  327 (420)
T KOG0257         267 -------------LFPV-----HQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-G  327 (420)
T ss_pred             -------------HHHH-----HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_conf             -------------7878-----64552026807789999987400201687620689987999999999999999866-9


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH-HHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf             16766882003653178982473101137345-67888999998886282872665567675056861588899999999
Q gi|254780153|r  293 IENLAVDETTRSNTSICMKIVDSDIASLDINS-QKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLL  371 (391)
Q Consensus       293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L  371 (391)
                      +.....+-.+.  +.+-|....  ......+. +.-.+-.+...+.++++..          .+|.+-++.  .+++...
T Consensus       328 ~~v~~p~gayy--l~adfs~~~--~~~~~~~~~~~~~d~~~~~wl~~~~Gv~----------~IP~saF~s--~~~~~~~  391 (420)
T KOG0257         328 LKVTGPEGAYY--LWADFSLAK--SWPFFEEILEKPDDFKFVRWLIKEGGVV----------VIPPSAFGS--REHIKVA  391 (420)
T ss_pred             CCCCCCCCCEE--EEEECCCCC--CCCCCHHHCCCCCCEEEEHHHHCCCCEE----------EECCHHCCC--CHHHHHH
T ss_conf             85226898438--999546534--5786222225777336452130558679----------947211378--3556788


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999877511
Q gi|254780153|r  372 CDWLRWVFYFQKISFLRAI  390 (391)
Q Consensus       372 ~~aLe~~~~~~k~~~~~~~  390 (391)
                      -..+.++|.+.++..++|+
T Consensus       392 ~~~~r~~~~k~~~~L~~a~  410 (420)
T KOG0257         392 ERLVRFCFCKADETLRKAI  410 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHH
T ss_conf             7778888775499999999


No 272
>PRK08637 hypothetical protein; Provisional
Probab=98.56  E-value=8.3e-05  Score=49.95  Aligned_cols=296  Identities=16%  Similarity=0.141  Sum_probs=144.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-
Q ss_conf             9889999999999999996889985799974873489998753205789707997073688888765323876306740-
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-  121 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-  121 (391)
                      -++|.+...+..-+-..-+ .++.....+.+.|||++.-.+..+++.+|+.+++.+=.|.... ..+...++..+..+. 
T Consensus        46 ~p~~~~~~~~~~~~~~~~~-~~~~~~~~v~T~Ggt~al~~~~~~~~~~gd~Vlip~P~W~ny~-~i~~~~~G~~v~~y~~  123 (386)
T PRK08637         46 IEELRDLWQQKMLRDNPSL-SGKNMSLPIVTNALTHGLSLVADLFVNQGDTVLLPDHNWGNYK-LVFNTRNGANLQTYPI  123 (386)
T ss_pred             CHHHHHHHHHHHHCCCCHH-HHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHH-HHHHHHCCCCEEEEEE
T ss_conf             2999999999983679211-1126466687574689999999998479998999179854179-9999837984167742


Q ss_pred             -CCCCCCCCHHH----C---CCCCCEEEEEE--ECCCCEEECCEEE-----ECCC-----CCCEEEEEECC-HHHHCC--
Q ss_conf             -57776578676----7---85565799742--0242022032035-----0256-----86148864011-011025--
Q gi|254780153|r  122 -APYGSLPDFSK----V---DFDRDVVFVWN--GTTSGVCVPDVGF-----IPES-----REGLVICDATS-AVFARH--  178 (391)
Q Consensus       122 -~~~g~~~~~~~----~---~~~~~v~~~h~--ETstGv~~~~~~~-----~~~~-----~~~llivD~vS-s~g~~p--  178 (391)
                       ...+. ++++.    +   .....+.+.||  ..-||+.....++     ++++     ++.++++|..= .+....  
T Consensus       124 ~~~~~~-~~~~~~~~~l~~~~~~~~vvll~n~phNPTG~~~t~ee~~~i~~~~~~~~~~g~~i~~i~D~aY~~~~~~~~~  202 (386)
T PRK08637        124 FDKDGH-FTTDALVEALQAAYNKDKVILILNFPNNPTGYTPTHKEVTTIVEAIKALADKGTKVIAVVDDAYYGLFYEDVY  202 (386)
T ss_pred             ECCCCC-CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCC
T ss_conf             646789-7819999999845778838999878999888689999999999999987733888899996014566308843


Q ss_pred             -------C-CC-CCC-EEEEECCHHCCCCCCCCE--EE---EECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCC
Q ss_conf             -------4-55-685-799970012001766515--44---567788876541144577831232001123210334786
Q gi|254780153|r  179 -------I-DF-NKL-DVVTFSAQKVLGGEAGFG--II---ILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE  243 (391)
Q Consensus       179 -------~-d~-~~i-Dv~~a~sQK~l~~ppGl~--~v---~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (391)
                             + ++ +++ -+++.|.-|+++. .|.=  .+   .-++...++...               ..+.   . -.+
T Consensus       203 ~~~~~~~~~~~~~~~~~i~~~s~SK~~~m-yG~RvG~l~~~~~~~~~~~~~~~---------------~~~~---~-~r~  262 (386)
T PRK08637        203 KESLFTALANLHSNILAVKLDGATKEFFA-WGFRVGFITFGTSDQTTKEVLEA---------------KVKG---L-IRS  262 (386)
T ss_pred             CCHHHHHHHCCCCCEEEEEECCCCCCCCC-CCCCEEEEEEECCCHHHHHHHHH---------------HHHH---H-HHC
T ss_conf             22499986215776489996131012557-00231578860598999999999---------------9999---9-860


Q ss_pred             CCCCCCHHHHHHHHHHHHHHH---CC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf             446664488999999998620---10--3189999999977999999987479716766882003653178982473101
Q gi|254780153|r  244 TINTPSLLCIEDYIDALLWLK---KM--GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA  318 (391)
Q Consensus       244 ~~~TP~v~~i~al~~~l~~i~---~~--gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~  318 (391)
                      ++..||.+.-++...+|+--+   ++  .-++.+..|.....+.+.+.... ..+..++.    .+-.-+++...+.   
T Consensus       263 ~~Snpp~~gq~~~~~~L~~~~~~~~e~~e~~~~m~~R~~~~~~~l~~~~~~-~~~~~~p~----~~G~F~~i~~~~~---  334 (386)
T PRK08637        263 NISSGPHPSQSAVLHVLKNPDQFDKEIEQKIQILKERYEVTKEVVYDDQYD-DHWQAYPF----NSGYFMCLKLKDV---  334 (386)
T ss_pred             CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCC----CCEEEEEECCCCC---
T ss_conf             448856899999999975908899999999999999999999997420435-68632456----7615886479989---


Q ss_pred             CCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             1373456788899999-8886282872665567675056861588899999999999999999999
Q gi|254780153|r  319 SLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       319 ~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                        +       ...+.. ++.+.++.+- ...   .+.+||+.- .++.++|+.+.++|..+.+++|
T Consensus       335 --~-------~e~l~~~Lle~~~V~~v-~~g---~~~iRIs~a-als~~nI~~~~~~I~~al~~Lk  386 (386)
T PRK08637        335 --D-------AEELRVHLLEKYGIGVI-ALN---ETDLRIAFS-CVEEEDIPHVFDSIAKAIDDLR  386 (386)
T ss_pred             --C-------HHHHHHHHHHCCCEEEE-ECC---CCCEEEEEE-ECCHHHHHHHHHHHHHHHHHCC
T ss_conf             --9-------99999999863958999-559---997799998-5889999999999999998539


No 273
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.51  E-value=0.00011  Score=49.24  Aligned_cols=324  Identities=16%  Similarity=0.078  Sum_probs=166.5

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHH------HCCC-CCCE
Q ss_conf             96899998632103653289889--999999999999996889-985799974873489998753------2057-8970
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALW------SLLG-YRGV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~------nl~~-~~~~   93 (391)
                      +|+ +.+++.+++-..+|-..-|  .+=-.+.-++|.++.  | .+..-+|++.||+.++|.++-      +..+ ++..
T Consensus        62 ~~~-i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~a--P~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~  138 (449)
T COG0161          62 RPE-IAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELA--PEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRK  138 (449)
T ss_pred             CHH-HHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHC--CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             779-999999999857740114557836999999999867--98775679980896189999999999999965997531


Q ss_pred             -EE-EEECCHHHHHHHHHH-----HC------CCCCEEEEECCC-------CCCCC-----HHHCC------CCCCEEEE
Q ss_conf             -79-970736888887653-----23------876306740577-------76578-----67678------55657997
Q gi|254780153|r   94 -DV-LAWESFGLGWMSDIR-----QL------SLQDVREFTAPY-------GSLPD-----FSKVD------FDRDVVFV  142 (391)
Q Consensus        94 -~~-~~~g~~~~r~~~~~~-----~~------~~~~~~~~~~~~-------g~~~~-----~~~~~------~~~~v~~~  142 (391)
                       .+ ..+|+.|.-+.....     .+      ....+.....|+       +....     .++++      .+..++-+
T Consensus       139 ~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAf  218 (449)
T COG0161         139 KFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAF  218 (449)
T ss_pred             EEEEECCCCCCCCCHHEECCCCHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             89995267476653001356854555430144455762268996434577777748899999999999986095528999


Q ss_pred             EEEC----CCCEEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCC---CEEE
Q ss_conf             4202----42022032------0350256861488640110-110--254--556857999700120017665---1544
Q gi|254780153|r  143 WNGT----TSGVCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAG---FGII  204 (391)
Q Consensus       143 h~ET----stGv~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppG---l~~v  204 (391)
                      -.|.    ..|+..|.      .+.+|..+++|+|+|=|-+ ||-  ..+  +-+++-=.+.+--|+|.+  |   ++.+
T Consensus       219 I~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~--GY~Pl~a~  296 (449)
T COG0161         219 IVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTG--GYLPLSAV  296 (449)
T ss_pred             EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCHHHHHHHCCCCCCEEEECCCCCC--CCHHHHHH
T ss_conf             9552005667754187689999999999839479930110078857515566525999784655131012--65010767


Q ss_pred             EECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             56778887654114457783123200112321033478644666448899999999862010318999999997799999
Q gi|254780153|r  205 ILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLF  284 (391)
Q Consensus       205 ~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~  284 (391)
                      +++++-.+....-. .                -....|.|+ |-+-....+..+.|+.++++ +   +.+|.++....+.
T Consensus       297 l~~~~I~~~~~~~~-~----------------~~f~HG~TY-sghPlacAaAla~L~i~e~e-~---l~~~~~~~~~~l~  354 (449)
T COG0161         297 LTSDRIYEAFSDGD-A----------------GAFMHGHTY-SGNPLACAAALANLDILEEE-D---LLERVAEIGAYLQ  354 (449)
T ss_pred             HHHHHHHHHHHCCC-C----------------CEECCCCCC-CCCHHHHHHHHHHHHHHHHC-C---HHHHHHHHHHHHH
T ss_conf             50599999986466-8----------------701447866-44899999999889999856-7---9999999999999


Q ss_pred             HHHHH-CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCC--
Q ss_conf             99874-797167668820036531789824731011373456788899999888628287266556767505686158--
Q gi|254780153|r  285 QFIQE-NDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGV--  361 (391)
Q Consensus       285 ~~i~~-~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g--  361 (391)
                      +.+.. .... +.|.+-..+..+-..=.+.|......+   +......+.+...++|.++...     |  --|..++  
T Consensus       355 ~~L~~~l~~~-p~VgdVR~~Gli~~iElv~d~~t~~~f---~~~~~~~~~~~~~e~Gl~iRp~-----g--~~i~~~PPl  423 (449)
T COG0161         355 AGLQAALADH-PLVGDVRGLGLIGAIELVADKATKTPF---EARVGARVRAAALERGLLIRPL-----G--DVIYLMPPL  423 (449)
T ss_pred             HHHHHHCCCC-CCEEEEECCCEEEEEEEECCCCCCCCC---HHHHHHHHHHHHHHCCEEEEEC-----C--CEEEECCCC
T ss_conf             9998751369-927872226559999984156666640---4569999999999789389555-----9--889973883


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             889999999999999999999998
Q gi|254780153|r  362 TVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       362 ~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      .++.++|+.+++.+..++......
T Consensus       424 iit~~eid~l~~~l~~al~~~~~~  447 (449)
T COG0161         424 IITREEIDELVDALREALDETLAD  447 (449)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             489999999999999999998750


No 274
>PRK09147 aminotransferase; Provisional
Probab=98.50  E-value=0.00012  Score=49.03  Aligned_cols=316  Identities=12%  Similarity=0.042  Sum_probs=156.4

Q ss_pred             CCCCCCC-CCCCHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHHHHHCC
Q ss_conf             8868887-768968999986321036532898--899999999999999968899--85799974873489998753205
Q gi|254780153|r   14 PFFSSGP-CAKRPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPE--NYRIAIVPASDTGAVEMALWSLL   88 (391)
Q Consensus        14 ~~F~pGP-~~~~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~--~y~v~~l~GsgT~~~ea~~~nl~   88 (391)
                      ++++-|= .--.|..+.+++...+-+.+|=++  =..++-+.+-+.+++-++++.  ...-++.+.|++.++..++..++
T Consensus        32 I~L~iG~Pd~~~P~~v~~a~~~a~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~~v~vt~Ga~~al~~~~~a~l  111 (397)
T PRK09147         32 ISLSIGEPKHPTPAFVRDALAANLDGLAVYPTTAGLPALRQAIARWLERRYGLPAVDPATQVLPVNGSREALFAFAQTVI  111 (397)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHC
T ss_conf             87648889999789999999998628778999978499999999999987099867857469988882899999998605


Q ss_pred             CCCCE---EEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--
Q ss_conf             78970---7997073688888765323876306740--57776578676785-----565799742024202203203--
Q gi|254780153|r   89 GYRGV---DVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--  156 (391)
Q Consensus        89 ~~~~~---~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--  156 (391)
                      .+++.   +++-+=.|...  .......+..+..+.  ...+..+++++++.     .+.+.++.=..-||...+..+  
T Consensus       112 ~~gd~g~~Vl~~~P~Y~~y--~~~~~~~G~~~v~vp~~~e~~~~~d~~~l~~~i~~~tk~iil~sP~NPTG~v~s~e~l~  189 (397)
T PRK09147        112 DRSDPGPLVVCPNPFYQIY--EGAALLAGAEPYFLNCDPANGFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWK  189 (397)
T ss_pred             CCCCCCCEEEECCCCCCCC--HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHH
T ss_conf             8889888899688878774--99999769868992357122777697898987311274898689989889988889999


Q ss_pred             ---EECCCCCCEEEEEECCHHH----HC-C---------CCCCCC--EEEEECCHHCCCCCCCC--EEEEECHHHHHHHH
Q ss_conf             ---5025686148864011011----02-5---------455685--79997001200176651--54456778887654
Q gi|254780153|r  157 ---FIPESREGLVICDATSAVF----AR-H---------IDFNKL--DVVTFSAQKVLGGEAGF--GIIILSPASVERLE  215 (391)
Q Consensus       157 ---~~~~~~~~llivD~vSs~g----~~-p---------~d~~~i--Dv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~  215 (391)
                         .+|..++..+|.|-+=+-.    .. |         +.....  -+++.|.-|.++ -||+  |.++..++.+++..
T Consensus       190 ~l~~la~~~~i~iisDEiY~~l~~d~~~~p~~~~~~~~~~~~~~~~~~I~~~S~SK~~~-~~G~RiG~i~~~~~li~~~~  268 (397)
T PRK09147        190 KLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSN-VPGLRSGFVAGDAALLKKFL  268 (397)
T ss_pred             HHHHHHCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC-CCCCCEEEEECCHHHHHHHH
T ss_conf             99996324728999826865215479879815777777626565686899815721036-76652588868999999999


Q ss_pred             HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             11445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r  216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN  295 (391)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~  295 (391)
                      ..            ..+        .+   ...++..-++...++.   .+.-+....+.++++.+.+.+.+...  +..
T Consensus       269 ~~------------~~~--------~~---~~~~~~~q~A~~aa~~---~~~~~~~~r~~~~~r~~~~~~~l~~~--~~~  320 (397)
T PRK09147        269 LY------------RTY--------HG---CAMPPQVQLASIAAWN---DEAHVRENRALYREKFDAVTPILAPV--LDV  320 (397)
T ss_pred             HH------------HHH--------HH---CCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHCC--CCC
T ss_conf             97------------354--------22---2578999999999856---83679999999999999999987337--987


Q ss_pred             CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-------CCCCCCE-EEEECCCCCCHH
Q ss_conf             668820036531789824731011373456788899999-8886282872665-------5676750-568615888999
Q gi|254780153|r  296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-------YRDAPLG-LRVWVGVTVEKE  366 (391)
Q Consensus       296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-------~r~~~~~-~RIg~~g~i~~~  366 (391)
                        ..|+  +..-+-+.+++  .   +   .    .++.. ++.+.|+++--|.       +...|.+ +|++.-  .+.+
T Consensus       321 --~~P~--gg~ylw~~~~~--~---~---~----~~f~~~Ll~~~gV~v~PGs~F~~~~~g~~~G~g~vRl~~a--~~~e  382 (397)
T PRK09147        321 --QLPD--AGFYLWAKVPG--G---D---D----TAFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLA  382 (397)
T ss_pred             --CCCC--EEEEEEEECCC--C---C---H----HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEC--CCHH
T ss_conf             --7889--73599886899--9---9---8----9999999996899998681004233478889988999974--9899


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  367 DLLLLCDWLRWV  378 (391)
Q Consensus       367 dv~~L~~aLe~~  378 (391)
                      ++..-++-|+..
T Consensus       383 ~l~eal~Rl~~~  394 (397)
T PRK09147        383 ECVEAAERIVDF  394 (397)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999999


No 275
>KOG0053 consensus
Probab=98.46  E-value=1.2e-05  Score=55.37  Aligned_cols=205  Identities=15%  Similarity=0.095  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             999999999968899857999748734899987532057897079970736888--887653238763067405777657
Q gi|254780153|r   51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREFTAPYGSLP  128 (391)
Q Consensus        51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~~~~~g~~~  128 (391)
                      +...+.+..+-+++.   ++. -.||..+...++..|+..++..+.....|++-  .+.......+..+..++..     
T Consensus        80 ~~le~~iaal~ga~~---~l~-fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-----  150 (409)
T KOG0053          80 DVLESGIAALEGAAH---ALL-FSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-----  150 (409)
T ss_pred             HHHHHHHHHHHCCCE---EEE-ECCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEECHH-----
T ss_conf             899999998718863---899-34407899999998467898589717875009999999999709354330416-----


Q ss_pred             CHHHCCC--CCCEEEEEEECCCCEEE---CC--EEEECCCCCCEEEEEECCHH--HHCCCCCCCCEEEEECCHHCCCCCC
Q ss_conf             8676785--56579974202420220---32--03502568614886401101--1025455685799970012001766
Q gi|254780153|r  129 DFSKVDF--DRDVVFVWNGTTSGVCV---PD--VGFIPESREGLVICDATSAV--FARHIDFNKLDVVTFSAQKVLGGEA  199 (391)
Q Consensus       129 ~~~~~~~--~~~v~~~h~ETstGv~~---~~--~~~~~~~~~~llivD~vSs~--g~~p~d~~~iDv~~a~sQK~l~~pp  199 (391)
                      +++.+..  ...+-+++.||.+-=..   ++  ...+++.++.++|||.+=+-  ...|+.. +.|+++-|.-|-|+|-.
T Consensus       151 ~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~l-GADIV~hSaTKyi~Ghs  229 (409)
T KOG0053         151 DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPL-GADIVVHSATKYIGGHS  229 (409)
T ss_pred             HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHC-CCCEEEEEEEEEECCCC
T ss_conf             67889986266706999977999750045699999987417978999577676333671213-88789985101444776


Q ss_pred             CC--EEEEEC-HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             51--544567-788876541144577831232001123210334786446664488999999998620103189999999
Q gi|254780153|r  200 GF--GIIILS-PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERC  276 (391)
Q Consensus       200 Gl--~~v~~s-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~  276 (391)
                      -+  |.++.+ ++...+.....                       ..+-.+|+-+..+.+...|+      -+.-|.++|
T Consensus       230 dvi~G~iv~n~~~~~~~l~~~~-----------------------~~lg~~~~p~~~~ll~Rglk------tl~lRi~~~  280 (409)
T KOG0053         230 DVIGGSVVLNSEELASRLKFLQ-----------------------EDLGWCEDPFDLFLLSRGLK------TLHLRINKH  280 (409)
T ss_pred             CEEEEEEECCCHHHHHHHHHHH-----------------------HHHCCCCCHHHHHHHHCCCC------HHHHHHHHH
T ss_conf             6351477617499999999999-----------------------98557998899999866841------554049888


Q ss_pred             HHHHHHHHHHHHHCCCCC
Q ss_conf             977999999987479716
Q gi|254780153|r  277 NANAAVLFQFIQENDWIE  294 (391)
Q Consensus       277 ~~~a~~l~~~i~~~~~~~  294 (391)
                      .+++..+-.++++++..+
T Consensus       281 ~ena~~~A~~Le~~~~v~  298 (409)
T KOG0053         281 SENALKIALLLEAHPKVK  298 (409)
T ss_pred             HHHHHHHHHHHHHCCCEE
T ss_conf             878999998765088536


No 276
>KOG1402 consensus
Probab=98.45  E-value=0.00015  Score=48.25  Aligned_cols=308  Identities=17%  Similarity=0.119  Sum_probs=176.9

Q ss_pred             CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH----------HCCCCC
Q ss_conf             9689999863210--3653289889999999999999996889985799974873489998753----------205789
Q gi|254780153|r   24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW----------SLLGYR   91 (391)
Q Consensus        24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~----------nl~~~~   91 (391)
                      +|. ++++++.+.  |-.+.| .-+.+++.+--+.+.++|+-.   .|+.|. .|-.+.|.++-          |...++
T Consensus        77 hpk-i~~aLqeq~~kLtlssr-afYnd~~~~f~~~vt~lf~~~---kvlpmn-TGaEa~Eta~KLaR~wgy~~K~ip~nk  150 (427)
T KOG1402          77 HPK-IIKALQEQADKLTLSSR-AFYNDVLGEFAEYVTKLFGYD---KVLPMN-TGAEAVETACKLARKWGYRKKNIPKNK  150 (427)
T ss_pred             CHH-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCC---EEEECC-CCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             779-99999998767513367-776556789999999866854---553235-540677879999999777631688660


Q ss_pred             CEEEEEECCHHHHHHHHHHHCCCCC---------E-EEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECCEE--
Q ss_conf             7079970736888887653238763---------0-67405777657867678556579974202420---2203203--
Q gi|254780153|r   92 GVDVLAWESFGLGWMSDIRQLSLQD---------V-REFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPDVG--  156 (391)
Q Consensus        92 ~~~~~~~g~~~~r~~~~~~~~~~~~---------~-~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~~~--  156 (391)
                      .+.+..-|.|.+|-...+..-+..+         . .....++|....++..=..+.|+-...|-..|   |..|...  
T Consensus       151 a~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL  230 (427)
T KOG1402         151 AKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYL  230 (427)
T ss_pred             EEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCHHH
T ss_conf             04898505556733456771578006545699999863032268779999986298756898511346653372892067


Q ss_pred             ----EECCCCCCEEEEEECCHHHHCC-----CCCCCC--EEEEECCHHCCCCCCCCEEE---EECHHHHHHHHHCCCCCC
Q ss_conf             ----5025686148864011011025-----455685--79997001200176651544---567788876541144577
Q gi|254780153|r  157 ----FIPESREGLVICDATSAVFARH-----IDFNKL--DVVTFSAQKVLGGEAGFGII---ILSPASVERLEKYVPSWP  222 (391)
Q Consensus       157 ----~~~~~~~~llivD~vSs~g~~p-----~d~~~i--Dv~~a~sQK~l~~ppGl~~v---~~s~~al~~~~~~~~~~~  222 (391)
                          .+|.+++.++|+|-+++=.++.     .|++++  |+++.+  |+|+|  |+-++   +.+++.+..         
T Consensus       231 ~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilg--KalSG--G~~Pvsavl~~~~im~~---------  297 (427)
T KOG1402         231 KKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILG--KALSG--GVYPVSAVLADDDIMLN---------  297 (427)
T ss_pred             HHHHHHHHHHCEEEEEHHHHHCCCCCCCEEEEEHHHCCCCEEEEE--CCCCC--CEEEEEEEEECHHHHHC---------
T ss_conf             899999875147888244342523467478865431587768981--11368--70456899854789861---------


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                                   ......++|+.--| ....+.-.+|+.|.+|    +...|+......+++.+.++.--.+-+ -.+.
T Consensus       298 -------------~~pgeHgsTyggNp-Lg~~vaiAalevi~ee----kL~era~~lG~~l~~~L~~l~~~~p~~-v~~V  358 (427)
T KOG1402         298 -------------IKPGEHGSTYGGNP-LGCAVAIAALEVIVEE----KLVERAAKLGEILRDQLNKLQKKFPHV-VKEV  358 (427)
T ss_pred             -------------CCCCCCCCCCCCCH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHCCCCCCCH-HHEE
T ss_conf             -------------68775556568880-8889999999999997----899999998799999998544025644-4334


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             36531789824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      |.+...+..+-+|...+....+      + ..+..++++..--..|   +..||-.--=.|+++|++.-+++|+-+.
T Consensus       359 RGrGl~~ai~i~~~~~~~~~aw------~-~cl~lk~~g~LAkptH---~~IiRfaPPL~I~e~dl~eg~e~i~k~i  425 (427)
T KOG1402         359 RGRGLLNAIVINPSKTSGQDAW------D-VCLALKENGLLAKPTH---GNIIRFAPPLVISEEDLREGIEAIEKTI  425 (427)
T ss_pred             ECCCEEEEEEECCCCCCCHHHH------H-HHHCCCCCCCCCCCCC---CCEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf             2253378899615556646588------8-8870302561047778---8758746884357899988999999974


No 277
>KOG1360 consensus
Probab=98.43  E-value=8.5e-05  Score=49.90  Aligned_cols=307  Identities=16%  Similarity=0.124  Sum_probs=182.8

Q ss_pred             CHHHHHHHHHHHCC----------CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC--CC
Q ss_conf             96899998632103----------6532898899999999999999968899857999748734899987532057--89
Q gi|254780153|r   24 RPGWSLGILEGALL----------GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG--YR   91 (391)
Q Consensus        24 ~p~~v~~~~~~~~l----------~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~--~~   91 (391)
                      +|+ |+++|...+=          +||--+..-    -+..+.|.+|-+-+    ..++=+|---+.++++..|-+  |+
T Consensus       187 Hp~-V~~A~~~tl~~hG~GAGGTRNIsG~s~~h----v~LE~eLA~LHqK~----aALlFsSCfVANDstLftLak~lpg  257 (570)
T KOG1360         187 HPE-VLDAMHDTLDRHGAGAGGTRNISGHSKHH----VRLEAELADLHQKE----AALLFSSCFVANDSTLFTLAKKLPG  257 (570)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHCCC----CEEEEEEEEECCCHHHHHHHHHCCC
T ss_conf             827-99999999997188867765467787135----55999999884676----1035542134164589999977899


Q ss_pred             CEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC------CCCCCEEEEEEECCCCEEECCEEE--ECCCCC
Q ss_conf             707997073688888765323876306740577765786767------855657997420242022032035--025686
Q gi|254780153|r   92 GVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV------DFDRDVVFVWNGTTSGVCVPDVGF--IPESRE  163 (391)
Q Consensus        92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~v~~~h~ETstGv~~~~~~~--~~~~~~  163 (391)
                      ...+...|..    +.++.-+....+...-+.......++++      ...+.++|-.+-+-+|..-|++++  +++++|
T Consensus       258 cei~SD~gNH----ASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yG  333 (570)
T KOG1360         258 CEIFSDEGNH----ASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYG  333 (570)
T ss_pred             CEEECCCCCH----HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             6885366533----888877651597522424699899999997579888826887664026777577899977887717


Q ss_pred             CEEEEEECCHHHHC----------CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             14886401101102----------54556857999700120017665154456778887654114457783123200112
Q gi|254780153|r  164 GLVICDATSAVFAR----------HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       164 ~llivD~vSs~g~~----------p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                      ++..+|-+-+.|-+          +=-+.++|++-..-.|++|+..|.  +..+.+.++-...            |.   
T Consensus       334 AiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGY--IAat~~LvDmiRS------------yA---  396 (570)
T KOG1360         334 AITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGY--IAATRKLVDMIRS------------YA---  396 (570)
T ss_pred             CEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCE--EHHHHHHHHHHHH------------HC---
T ss_conf             545310123100215777876656775203220014045541665423--3004469999997------------46---


Q ss_pred             HHHCCCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             32103347864466---644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r  234 RVMEGLFCGETINT---PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM  310 (391)
Q Consensus       234 ~~~~~~~~~~~~~T---P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~  310 (391)
                              ..++||   ||. .+.+..++.+.+..++|..-+ ..|+++-+.++..+...+  .+.+..|.    -++.+
T Consensus       397 --------aGFIFTTSLPP~-vl~GAleaVr~lk~~eg~~lR-~~hqrnv~~~kq~l~~~G--iPVi~~pS----HIiPv  460 (570)
T KOG1360         397 --------AGFIFTTSLPPM-VLAGALEAVRILKSEEGRVLR-RQHQRNVKYVKQLLMELG--IPVIPNPS----HIIPV  460 (570)
T ss_pred             --------CCEEEECCCCHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCC--CCCCCCCC----CEEEE
T ss_conf             --------866873379828-887289999998632547899-999999999999998749--86347886----53335


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             82473101137345678889999988862828726655676750---56861588899999999999999999999987
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF  386 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~  386 (391)
                      ++.|+....          .....++.+.|+.+..-.|.++..|   +||.--+..+++-++.|+++|..++.+...+.
T Consensus       461 ~vgda~l~~----------~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l~~  529 (570)
T KOG1360         461 RVGDAALAK----------QASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGLPR  529 (570)
T ss_pred             ECCCHHHHH----------HHHHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             506777777----------778998875275788526874566601342179998878999999999999999729865


No 278
>KOG1359 consensus
Probab=98.42  E-value=2.6e-05  Score=53.12  Aligned_cols=316  Identities=18%  Similarity=0.125  Sum_probs=160.6

Q ss_pred             CCCCC----CCCCCCHHHHHHHHHHHCCCC--CCCCH----HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf             88688----877689689999863210365--32898----899999999999999968899857999748734899987
Q gi|254780153|r   14 PFFSS----GPCAKRPGWSLGILEGALLGR--SHRCV----LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA   83 (391)
Q Consensus        14 ~~F~p----GP~~~~p~~v~~~~~~~~l~~--sHRs~----~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~   83 (391)
                      .||++    |=++ +|+ +.++-+..+=++  .--|-    -.+++.+...+.|.++-+..|   +++.+ ++--+..++
T Consensus        70 lnFcaNnYLGLss-hPe-ii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED---~ilyp-scfdANag~  143 (417)
T KOG1359          70 LNFCANNYLGLSS-HPE-IINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED---TILYP-SCFDANAGA  143 (417)
T ss_pred             EEECCCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC---EEEEC-CCCCCCHHH
T ss_conf             4422454334457-838-88989999998287864316884455799999999998708775---48733-100344377


Q ss_pred             HHHCCCCCCEEEEEE-CCHH-HHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEE-EECCCCEEECCEEE--E
Q ss_conf             532057897079970-7368-88887653238763067405777657867678556579974-20242022032035--0
Q gi|254780153|r   84 LWSLLGYRGVDVLAW-ESFG-LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVW-NGTTSGVCVPDVGF--I  158 (391)
Q Consensus        84 ~~nl~~~~~~~~~~~-g~~~-~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h-~ETstGv~~~~~~~--~  158 (391)
                      ..-++.+++.++... +.-+ -.-...+++++..++-.++.-     ..+.-+..-.+..|- .=+-.|-..|..++  +
T Consensus       144 feail~pedAvfSDeLNhASIIdGirLckry~h~dv~~l~~~-----l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~L  218 (417)
T KOG1359         144 FEAILTPEDAVFSDELNHASIIDGIRLCKRYRHVDVFDLEHC-----LISACKMRLKLVVTDGVFSMDGDIAPLEEISQL  218 (417)
T ss_pred             HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH-----HHHHHHHEEEEEEECCEECCCCCCCCHHHHHHH
T ss_conf             877448254121000022034324677766445126778887-----777433217999854612147873338999999


Q ss_pred             CCCCCCEEEEEECCH--HHH-------CCCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             256861488640110--110-------2545-568579997001200176651544567788876541144577831232
Q gi|254780153|r  159 PESREGLVICDATSA--VFA-------RHID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR  228 (391)
Q Consensus       159 ~~~~~~llivD~vSs--~g~-------~p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~  228 (391)
                      ++++++|+++|-.-.  |.+       +.+. +..+|++...-.|++||-.| ++...++..+..+.+.  .++  ..|+
T Consensus       219 a~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttgp~~li~llrqr--~Rp--ylFS  293 (417)
T KOG1359         219 AKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTGPKPLISLLRQR--SRP--YLFS  293 (417)
T ss_pred             HHHCCCEEEEEECCCCEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHC--CCC--EEEC
T ss_conf             9862937998604310565578887388737777640204245666247778-8746875689999852--886--1421


Q ss_pred             CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf             00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r  229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI  308 (391)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v  308 (391)
                                       |+-|-..+-...++++.+..   -.....|-+.+-+.+++..+..+ |...     ..|.-+.
T Consensus       294 -----------------nslppavV~~a~ka~dllm~---s~~~i~~~~a~~qrfr~~me~aG-ftIs-----g~~hPI~  347 (417)
T KOG1359         294 -----------------NSLPPAVVGMAAKAYDLLMV---SSKEIQSRQANTQRFREFMEAAG-FTIS-----GASHPIC  347 (417)
T ss_pred             -----------------CCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHCC-CEEC-----CCCCCCC
T ss_conf             -----------------78980554156999999986---47999989889999999887528-2431-----7888742


Q ss_pred             EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             8982473101137345678889999988862828726655676750---5686158889999999999999999999
Q gi|254780153|r  309 CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       309 ~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      .+.+.|.           .....+...+.+.|+.+-.=.|+.++++   +||-.-.+.+.+||++|++|+-.+....
T Consensus       348 pv~lGda-----------~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~  413 (417)
T KOG1359         348 PVMLGDA-----------RLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL  413 (417)
T ss_pred             CEECCCH-----------HHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             3231638-----------88888899998557169862587678884479999701047888999999999988752


No 279
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.42  E-value=6.6e-05  Score=50.58  Aligned_cols=326  Identities=13%  Similarity=0.081  Sum_probs=151.3

Q ss_pred             CCCCCCC-CCCCHHHHHHHHHHHCCC--C--CCCCHHHHHHHHHHHHHHH-HHHCCC-CCCEEEEECCCCHHHHHHHHHH
Q ss_conf             8868887-768968999986321036--5--3289889999999999999-996889-9857999748734899987532
Q gi|254780153|r   14 PFFSSGP-CAKRPGWSLGILEGALLG--R--SHRCVLGKERINKAIQLTR-KVLEVP-ENYRIAIVPASDTGAVEMALWS   86 (391)
Q Consensus        14 ~~F~pGP-~~~~p~~v~~~~~~~~l~--~--sHRs~~f~~i~~~~~~~l~-~l~~~p-~~y~v~~l~GsgT~~~ea~~~n   86 (391)
                      .+|+-|= .--+|..+.+++.+.+-+  .  .|++..-..-+.+.++.+. ++++.. +.-+|++ +.|++.++-+ ++.
T Consensus        36 I~L~iGePdf~~P~~i~~a~~~ai~~~~~~~~~~gY~~~~G~~~LReaia~~~~~~~~~~d~I~v-t~Ga~~~l~~-l~a  113 (402)
T TIGR03542        36 IRLGIGDTTQPLPASVIEAFHEAVDELASEETYRGYGPEQGLPALREAIAENDYRGRISPEEIFI-SDGAKCDIGR-LQS  113 (402)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEE-CCCCHHHHHH-HHH
T ss_conf             58989998999899999999999971224678677797406499999999997568998899677-7782999999-999


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEE-EEECC------------CCCCCCHHHCCCCCCEEEEEEECCCCEEEC
Q ss_conf             05789707997073688888765323876306-74057------------776578676785565799742024202203
Q gi|254780153|r   87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVR-EFTAP------------YGSLPDFSKVDFDRDVVFVWNGTTSGVCVP  153 (391)
Q Consensus        87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~-~~~~~------------~g~~~~~~~~~~~~~v~~~h~ETstGv~~~  153 (391)
                      ++++||.+++.+=+|-..  ..+.+..+.... .....            .+..+++.+.+..+.+.++.=..-||...+
T Consensus       114 ~l~pGD~Vii~~P~y~~Y--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ktk~iiln~P~NPTG~v~s  191 (402)
T TIGR03542       114 IFGSDNTVAVQDPVYPAY--VDTAVMTGRAGFADDTGQYRGIVYLPCTKENGFIPELPEERKIDIIYLCSPNNPTGTVLT  191 (402)
T ss_pred             HHCCCCEEEEECCCCCCH--HHHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf             839999899838888157--999998599530135665567256767624385722234557359998999798875689


Q ss_pred             CEE-----EECCCCCCEEEEEECCHH-HHC---CC------CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHH
Q ss_conf             203-----502568614886401101-102---54------5568579997001200176651--544567788876541
Q gi|254780153|r  154 DVG-----FIPESREGLVICDATSAV-FAR---HI------DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEK  216 (391)
Q Consensus       154 ~~~-----~~~~~~~~llivD~vSs~-g~~---p~------d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~  216 (391)
                      ..+     .+|.+++..+|.|-+=+- ...   |.      ++...-+.+.|.-|.++ -||+  |.++..++.......
T Consensus       192 ~eel~~i~~la~~~~i~iIsDEiY~~~~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~-m~G~RiG~~i~p~~l~~~~~~  270 (402)
T TIGR03542       192 KEQLKELVDYANAHGSLILFDAAYSAFISDPSIPHSIYEIEGAKECAIEINSFSKSLG-FTGVRLGWTVVPKELTYADGH  270 (402)
T ss_pred             HHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCEECCCCCCEEEECCCCCCCCC-CCCCCHHHEECCHHHHHHHHH
T ss_conf             9999999999875070796022288761689876201113665213673167624027-834054021125877542279


Q ss_pred             CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r  217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL  296 (391)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~  296 (391)
                      .       ..-.+..        ....+.+.+++..-++...++..-..+ -+..+...++++.+.+++.+...+ +...
T Consensus       271 ~-------~~~~~~~--------~~~~~~~~~~~~~q~a~~aal~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g-~~~~  333 (402)
T TIGR03542       271 S-------VIQDWER--------RLCTTFNGASYPVQRAAEAAYAGEGLQ-PILEAISYYMENARILREALEAAG-FKVY  333 (402)
T ss_pred             H-------HHHHHHH--------HHHHCCCCCCHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEE
T ss_conf             9-------9999999--------987625775599999999997378859-999999999999999999887569-5760


Q ss_pred             CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHH
Q ss_conf             688200365317898247310113734567888999998-886282872665-5676750-5686158889999999999
Q gi|254780153|r  297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCD  373 (391)
Q Consensus       297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~  373 (391)
                      .  +.  +..-+-+.++..    .+       ..++... +.+.|+++--|. +...|.+ +|++.-.  +.++++.-++
T Consensus       334 ~--~~--ga~yl~~~~~~~----~~-------~~~~~~~ll~e~~V~vvPG~~FG~~g~g~vRls~a~--~~e~l~ea~~  396 (402)
T TIGR03542       334 G--GE--NAPYLWVKTPEG----IS-------SWDFFDFLLYQYHIVGTPGSGFGSSGEGFVRFSAFG--KRENIVAACE  396 (402)
T ss_pred             C--CC--CCEEEEEECCCC----CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEEC--CHHHHHHHHH
T ss_conf             7--99--734897878999----89-------899999999859999976447689998969999729--9999999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780153|r  374 WLRWV  378 (391)
Q Consensus       374 aLe~~  378 (391)
                      -|+.+
T Consensus       397 Rl~~~  401 (402)
T TIGR03542       397 RIKHA  401 (402)
T ss_pred             HHHHH
T ss_conf             99975


No 280
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase; InterPro: IPR012773    Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (2.6.1.76 from EC) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (Q9Z3R2 from SWISSPROT) or 1,3-diaminopropane (P44951 from SWISSPROT) biosynthesis. Ectoine is a compatible solute particularly effective in conferring salt tolerance.; GO: 0030170 pyridoxal phosphate binding, 0047307 diaminobutyrate-pyruvate transaminase activity, 0019491 ectoine biosynthetic process.
Probab=98.42  E-value=1.9e-05  Score=53.99  Aligned_cols=282  Identities=16%  Similarity=0.141  Sum_probs=162.7

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHHHH---HCCCCCCEEEEEECCHHHHHHHHHH--------H
Q ss_conf             8899999999999999968899-85799974873489998753---2057897079970736888887653--------2
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVPE-NYRIAIVPASDTGAVEMALW---SLLGYRGVDVLAWESFGLGWMSDIR--------Q  111 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p~-~y~v~~l~GsgT~~~ea~~~---nl~~~~~~~~~~~g~~~~r~~~~~~--------~  111 (391)
                      .+|.+.++++      ||+=-+ ||+|.|--=+||-++|+|+-   ..-++..++--.||..|--.-..+.        .
T Consensus        81 ~~Fl~~F~~~------IL~PR~LdYK~qFpGPTGTNaVEsAlKLARKvtGR~nvvaFTNaFHGmt~GsLsvTGN~~~R~~  154 (413)
T TIGR02407        81 REFLETFQEI------ILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVAFTNAFHGMTLGSLSVTGNRFKRQG  154 (413)
T ss_pred             HHHHHHHHHH------CCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999985------2678878951568887864079999999850389840688517730234898886433444302


Q ss_pred             CCCCCEEEEECCCCCCCC--HHHC--------------CCCCCEEEEEEECCCC--EEECC-------EEEECCCCCCEE
Q ss_conf             387630674057776578--6767--------------8556579974202420--22032-------035025686148
Q gi|254780153|r  112 LSLQDVREFTAPYGSLPD--FSKV--------------DFDRDVVFVWNGTTSG--VCVPD-------VGFIPESREGLV  166 (391)
Q Consensus       112 ~~~~~~~~~~~~~g~~~~--~~~~--------------~~~~~v~~~h~ETstG--v~~~~-------~~~~~~~~~~ll  166 (391)
                      .+.....+..-|+-...+  .+.+              +.+   |.+=.||+.|  -+|..       .+.+|+++|+||
T Consensus       155 aG~~~~~v~~mPYDgY~~~~~D~~~Yfe~~L~D~sSGvd~P---AAvILETVQGEGGiNvAs~eWLq~l~~lCr~~DILL  231 (413)
T TIGR02407       155 AGVPLSNVSRMPYDGYLGGEVDTIAYFEKLLEDSSSGVDLP---AAVILETVQGEGGINVASKEWLQRLEKLCRRHDILL  231 (413)
T ss_pred             CCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC---CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             67447782568765577864322899998617888984767---258981103757703123557999999998649868


Q ss_pred             EEEECCHHHHCC-----CCCCCC--EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf             864011011025-----455685--7999700120017665--1544567788876541144577831232001123210
Q gi|254780153|r  167 ICDATSAVFARH-----IDFNKL--DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME  237 (391)
Q Consensus       167 ivD~vSs~g~~p-----~d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (391)
                      |||=|++=+++-     |...+|  |+|.  --|-|+|- |  +|++.++|+.    +.++|.                 
T Consensus       232 IVDDIQaGCGRTG~FFSFE~AgI~PDiVc--LSKSisG~-GLPlal~L~kPe~----D~W~PG-----------------  287 (413)
T TIGR02407       232 IVDDIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGY-GLPLALVLIKPEL----DVWKPG-----------------  287 (413)
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCCEEE--EECCCCCC-CHHHHHHHHCCCC----CCCCCC-----------------
T ss_conf             77317418888789645344677566178--50200355-1268999735456----746788-----------------


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCEEE-EEECCC
Q ss_conf             33478644666448899999999862010318999999997799999998747971676688-2003653178-982473
Q gi|254780153|r  238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD-ETTRSNTSIC-MKIVDS  315 (391)
Q Consensus       238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~-~~~rS~~~v~-~~~~d~  315 (391)
                        +.+.|+ ==+-+++.+..++|+.+=.+   +.+.+..+++++.+.+++++.--- ..... ...|.+.-+. +.+.++
T Consensus       288 --EHNGTF-RGNNlAFVtA~aAL~~yW~D---d~f~~~v~~~s~~~~~~l~~~~~~-~~~~~~~~~RGRGlm~Gl~~~~~  360 (413)
T TIGR02407       288 --EHNGTF-RGNNLAFVTATAALEYYWSD---DAFEKAVQRKSEIIQERLDEIVAE-FPELIEKSVRGRGLMQGLECGDG  360 (413)
T ss_pred             --CCCCCC-CCCCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCEEEECCCCCH
T ss_conf             --778864-66527899999999984896---268999999999999999999987-45521311045201420004772


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCC--CCCHHHHHHHHHHHHHHHH
Q ss_conf             1011373456788899999888628287266556767505686158--8899999999999999999
Q gi|254780153|r  316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGV--TVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g--~i~~~dv~~L~~aLe~~~~  380 (391)
                      .           ..+++.+..=++|.++.+-|..+..    |=.++  +|++|+++.=++-||.|.+
T Consensus       361 ~-----------~A~~i~~~aF~~GLiiEtsGp~DeV----~K~lPpLTI~~~~L~~GL~IL~~a~~  412 (413)
T TIGR02407       361 D-----------LAGKIAKAAFENGLIIETSGPEDEV----IKLLPPLTIDEETLQQGLDILEQAVE  412 (413)
T ss_pred             H-----------HHHHHHHHHHHCCCEEEEECCCCCE----EEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             4-----------6899999986468389871889845----87038898887889999999999971


No 281
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.39  E-value=0.00022  Score=47.30  Aligned_cols=327  Identities=15%  Similarity=0.077  Sum_probs=174.1

Q ss_pred             CCCCCCCCC-CC-CCCHHHHHHHHHHHCCC--------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
Q ss_conf             998886888-77-68968999986321036--------532898899999999999999968899857999748734899
Q gi|254780153|r   11 PKRPFFSSG-PC-AKRPGWSLGILEGALLG--------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAV   80 (391)
Q Consensus        11 p~~~~F~pG-P~-~~~p~~v~~~~~~~~l~--------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~   80 (391)
                      |....|+.| |. ...|...++......+.        .+....-+..+-+.+.+.++.-.++.-+-+=+++++|++.++
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al  168 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL  168 (459)
T ss_pred             CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHH
T ss_conf             75547688998810188899999999998505612332268768889999999999999749988830389806499999


Q ss_pred             HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC------CCCEEE-EEEECCCCEEE
Q ss_conf             98753205789707997073688888765323876306740-57776578676785------565799-74202420220
Q gi|254780153|r   81 EMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF------DRDVVF-VWNGTTSGVCV  152 (391)
Q Consensus        81 ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~------~~~v~~-~h~ETstGv~~  152 (391)
                      +.+..-++.+||.+++.+=+|..- ...+...+ ..+..+. .+.|.  +++.++.      .+.+.+ ..+-.-||+.+
T Consensus       169 ~l~~~~l~~pGd~v~vE~PtY~~~-~~~~~~~g-~~~~~vp~d~~G~--~~e~le~~~~~~~~k~~y~~P~~qNPtG~tm  244 (459)
T COG1167         169 DLLLRLLLDPGDTVLVEDPTYPGA-LQALEALG-ARVIPVPVDEDGI--DPEALEEALAQWKPKAVYVTPTFQNPTGVTM  244 (459)
T ss_pred             HHHHHHHCCCCCEEEECCCCHHHH-HHHHHHCC-CCEEEECCCCCCC--CHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
T ss_conf             999998479999999899982899-99999869-9478606788898--9799999985069728997889638898745


Q ss_pred             CCEEE-----ECCCCCCEEEEEECCHHHHC---CCC-CCCC----EEEE-ECCHHCCCCCCCCEEEEECHHHHHHHHHCC
Q ss_conf             32035-----02568614886401101102---545-5685----7999-700120017665154456778887654114
Q gi|254780153|r  153 PDVGF-----IPESREGLVICDATSAVFAR---HID-FNKL----DVVT-FSAQKVLGGEAGFGIIILSPASVERLEKYV  218 (391)
Q Consensus       153 ~~~~~-----~~~~~~~llivD~vSs~g~~---p~d-~~~i----Dv~~-a~sQK~l~~ppGl~~v~~s~~al~~~~~~~  218 (391)
                      +....     ++..++..+|=|-.=+....   |.. .-..    -|+| .+.-|.|.--=.+|.+++.++.+++....+
T Consensus       245 s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k  324 (459)
T COG1167         245 SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLK  324 (459)
T ss_pred             CHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCHHHHCCCCCEEEECCCHHHHCCCCCEEEEECCHHHHHHHHHHH
T ss_conf             99999999999997598799867743321588998345762899978999132665146755499972999999999998


Q ss_pred             CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             45778312320011232103347864466644889999999986201031----89999999977999999987479716
Q gi|254780153|r  219 PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG----LSACVERCNANAAVLFQFIQENDWIE  294 (391)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG----l~~~~~r~~~~a~~l~~~i~~~~~~~  294 (391)
                                             ..+-.+++.+.-.++..   ++. .|+    +..+.+.++++.+.+.+.+.....-.
T Consensus       325 -----------------------~~~~~~~s~~~Q~~la~---~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~  377 (459)
T COG1167         325 -----------------------QAADLGPSSLSQAALAA---FLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPEL  377 (459)
T ss_pred             -----------------------HHHCCCCCHHHHHHHHH---HHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             -----------------------76256998999999999---997-285999999999999999999999999747876


Q ss_pred             CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECC-CCCCC----CCCEEEEECCCCCCHHHHH
Q ss_conf             766882003653178982473101137345678889999988862828726-65567----6750568615888999999
Q gi|254780153|r  295 NLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDI-GSYRD----APLGLRVWVGVTVEKEDLL  369 (391)
Q Consensus       295 ~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~r~----~~~~~RIg~~g~i~~~dv~  369 (391)
                      .....  -.+-.-+.+.++++..           ...+.....++|+.+.. +..=.    ..++||++.... +.++++
T Consensus       378 ~~~~~--p~gG~flwl~l~~~~~-----------~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~-~~e~i~  443 (459)
T COG1167         378 ATWTR--PEGGLFLWLELPEGID-----------ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP-SEEEIE  443 (459)
T ss_pred             EEEEC--CCCEEEEEEECCCCCC-----------HHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCCC-CHHHHH
T ss_conf             37726--9955899998699888-----------899999999869979458866357898898289988989-999999


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999999999
Q gi|254780153|r  370 LLCDWLRWVFYFQ  382 (391)
Q Consensus       370 ~L~~aLe~~~~~~  382 (391)
                      ..+..|-.+..+.
T Consensus       444 ~gi~~l~~~~~~~  456 (459)
T COG1167         444 EGIKRLAALLREA  456 (459)
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999999976


No 282
>KOG2467 consensus
Probab=98.37  E-value=7.5e-05  Score=50.24  Aligned_cols=323  Identities=14%  Similarity=0.141  Sum_probs=186.4

Q ss_pred             CCHHHHHHHHH-HHHHHHHHHCC-CCCCEEEEECCCCHHHHHHHHHHCCCCCCEE----EEEECCHHHHHHHHHHHCCCC
Q ss_conf             89889999999-99999999688-9985799974873489998753205789707----997073688888765323876
Q gi|254780153|r   42 RCVLGKERINK-AIQLTRKVLEV-PENYRIAIVPASDTGAVEMALWSLLGYRGVD----VLAWESFGLGWMSDIRQLSLQ  115 (391)
Q Consensus        42 Rs~~f~~i~~~-~~~~l~~l~~~-p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~----~~~~g~~~~r~~~~~~~~~~~  115 (391)
                      -+.+|.+-++- ++++-.+.|+. |+.|-|-+-+=||+-|.=++-.-++.|++..    +...|.-+.......+++-..
T Consensus        79 GGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~  158 (477)
T KOG2467          79 GGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISAT  158 (477)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEE
T ss_conf             75357899999999999998099888873330027898305678754148777134035798875556401688542246


Q ss_pred             CEEEEECCCCCC-----CCHHHCCCC-----CCEEEEEEECCCC---EEECCEEEECCCCCCEEEEEEC--CHHHH---C
Q ss_conf             306740577765-----786767855-----6579974202420---2203203502568614886401--10110---2
Q gi|254780153|r  116 DVREFTAPYGSL-----PDFSKVDFD-----RDVVFVWNGTTSG---VCVPDVGFIPESREGLVICDAT--SAVFA---R  177 (391)
Q Consensus       116 ~~~~~~~~~g~~-----~~~~~~~~~-----~~v~~~h~ETstG---v~~~~~~~~~~~~~~llivD~v--Ss~g~---~  177 (391)
                      -+-..+.|+...     .|-+.++..     ..+.++  .||.=   ..+.-.+.++...++.+++||.  |.+-+   .
T Consensus       159 SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iia--G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vi  236 (477)
T KOG2467         159 SIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIA--GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVI  236 (477)
T ss_pred             EEECCCCCEEECCCCCCEEHHHHHHHHHHCCCCEEEE--CCCCCHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCC
T ss_conf             6430048610279878130688888887518737995--36321323138999999875280664135667777752667


Q ss_pred             CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             54556857999700120017665154456778887654114457783123200112321033478644666448899999
Q gi|254780153|r  178 HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYI  257 (391)
Q Consensus       178 p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~  257 (391)
                      |=+++-+|++-+..+|.|-||-| +++.+++-. .   ..++.....-..++.  .+.+...+. ..-.-|--+.|.++.
T Consensus       237 psPFey~DiVTTTTHKsLRGPRg-~mIFyRkGv-k---~~~~k~g~~i~ydlE--~kINfaVFP-~lQGGPHNhtIaalA  308 (477)
T KOG2467         237 PSPFEYCDIVTTTTHKSLRGPRG-AMIFYRKGV-K---SIKPKQGKEILYDLE--DKINFAVFP-GLQGGPHNHTIAALA  308 (477)
T ss_pred             CCCCCCCCEEECCCCCCCCCCCC-EEEEEECCC-C---CCCCCCCCCCEECHH--HHHHHHCCC-CCCCCCCCCHHHHHH
T ss_conf             99642012464134345568763-168983267-7---678788976401266--530122266-556898733589999


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99986201031899999999779999999874797167668820036531789824731011373456788899999888
Q gi|254780153|r  258 DALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLE  337 (391)
Q Consensus       258 ~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~  337 (391)
                      .+|++...- ......++..++++.+-+.+.+.+ +.. +..-..  +-.+.+.+.+...+.   ...+++... ..+-+
T Consensus       309 vALkQa~tp-efk~Yq~qV~~Nakala~~l~~~G-y~l-vtgGTD--nHlvLvDLr~~G~dG---arvE~vle~-~~I~~  379 (477)
T KOG2467         309 VALKQAMTP-EFKEYQKQVLKNAKALASALISRG-YKL-VTGGTD--NHLVLVDLRPKGVDG---ARVEKVLEL-CHIAL  379 (477)
T ss_pred             HHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEE-ECCCCC--CEEEEEECCCCCCCH---HHHHHHHHH-HHHHH
T ss_conf             999860787-799999999999999999999729-667-407866--527999656467750---899999987-54133


Q ss_pred             HCCEEECCCCCCCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             628287266556767505686158----88999999999999999999999
Q gi|254780153|r  338 KEEIAYDIGSYRDAPLGLRVWVGV----TVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       338 ~~g~~~~~~~~r~~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      ..|-+.+=+ --..+.|+|||+..    ...++|.+...+.|+.+.+-...
T Consensus       380 NKNtvpGD~-Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~i~~~  429 (477)
T KOG2467         380 NKNTVPGDK-SALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVKIALE  429 (477)
T ss_pred             CCCCCCCCC-CCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             377677874-45588843316612213676688899999999999999999


No 283
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.35  E-value=0.00027  Score=46.74  Aligned_cols=297  Identities=15%  Similarity=0.088  Sum_probs=151.8

Q ss_pred             HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECCHHH---HHHHHHH----HCCCC---------C
Q ss_conf             9999996889985799974873489998753205--789707997073688---8887653----23876---------3
Q gi|254780153|r   55 QLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWESFGL---GWMSDIR----QLSLQ---------D  116 (391)
Q Consensus        55 ~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~~~~---r~~~~~~----~~~~~---------~  116 (391)
                      +.+.+.+..-  ..|-| .-|||.|.-.++.=--  ...++++.-.|.|-+   .+.-.+.    ..+..         .
T Consensus       100 ell~~~~p~~--e~vrf-vnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a  176 (432)
T COG0001         100 ELLIERVPSI--EKVRF-VNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVA  176 (432)
T ss_pred             HHHHHHCCCC--CEEEE-ECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf             9999865865--08998-60640899999999987647975999728888871187842676755578999999973453


Q ss_pred             EEEEECCCCCCCCHHHC-CC-CCCEEEEEEECC---CCEEECCEE------EECCCCCCEEEEEECCHHHHCCC----CC
Q ss_conf             06740577765786767-85-565799742024---202203203------50256861488640110110254----55
Q gi|254780153|r  117 VREFTAPYGSLPDFSKV-DF-DRDVVFVWNGTT---SGVCVPDVG------FIPESREGLVICDATSAVFARHI----DF  181 (391)
Q Consensus       117 ~~~~~~~~g~~~~~~~~-~~-~~~v~~~h~ETs---tGv~~~~~~------~~~~~~~~llivD~vSs~g~~p~----d~  181 (391)
                      .+.+..+++....+++. +. ..+++.|-.|-+   -|+..|..+      .+|++++.++|.|=|=+-...++    +.
T Consensus       177 ~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~  256 (432)
T COG0001         177 KHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGY  256 (432)
T ss_pred             CCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCC
T ss_conf             44788457999999999987689679999542467889898987899999999997194899862212045477642010


Q ss_pred             CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             68579997001200176651544567788876541144577831232001123210334786446664488999999998
Q gi|254780153|r  182 NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL  261 (391)
Q Consensus       182 ~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~  261 (391)
                      .++.-..+.-.|.+||===++.+..+.+-.+.   ..+..+.                ....|.+--|+ .+.+-..+|+
T Consensus       257 ~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~---~~p~g~v----------------yqaGT~sgnpl-amaAG~atl~  316 (432)
T COG0001         257 YGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQ---LAPLGPV----------------YQAGTLSGNPL-AMAAGLATLE  316 (432)
T ss_pred             CCCCCCHHHHHHHHCCCCCEEEECCHHHHHHH---HCCCCCC----------------CCCCCCCCCHH-HHHHHHHHHH
T ss_conf             08696333222440477520112569999963---2778876----------------45677788689-9999999999


Q ss_pred             HHHCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             6201031-899999999779999999874797167668820036531789824731011373456788899999888628
Q gi|254780153|r  262 WLKKMGG-LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEE  340 (391)
Q Consensus       262 ~i~~~gG-l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g  340 (391)
                      .+.++.+ .+.+.++-++..+-+.+.+++.+ +...+.  ..-|...+.|.-.++.....-..-+......+...+.++|
T Consensus       317 ~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g-~~~~v~--~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~G  393 (432)
T COG0001         317 ELMTEEGVYERLDALGERLAEGLRAAAERHG-IPLTVN--RVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRG  393 (432)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEE--EECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf             9873651899999999999999999999839-985886--2042589995589988899998635699999999999688


Q ss_pred             EEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             287266556767505686-15888999999999999999999999
Q gi|254780153|r  341 IAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       341 ~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      +.+       .+..|..+ +.-..+++||++.+++++.+|.+.+.
T Consensus       394 V~l-------~ps~~ea~flS~ahte~di~~~~~a~~~~~~~~~~  431 (432)
T COG0001         394 VYL-------APSQFEAGFLSTAHTEEDIDRTLEAADEAFKELAG  431 (432)
T ss_pred             CCC-------CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             234-------77555545520046899999999999999998633


No 284
>TIGR01437 selA_rel pyridoxal phosphate-dependent enzyme, putative; InterPro: IPR006337    Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy .   PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic .   This entry represents a group of proteins that are related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. .
Probab=98.35  E-value=3.2e-05  Score=52.60  Aligned_cols=327  Identities=13%  Similarity=0.095  Sum_probs=193.7

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE--EE
Q ss_conf             8776896899998632103653289889999999999999996889985799974873489998753205789707--99
Q gi|254780153|r   19 GPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVD--VL   96 (391)
Q Consensus        19 GP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~--~~   96 (391)
                      |=+.|-|+ |++++...=   +| ==+.+++...+=+-+.+++++.+.    .+++||+.+.-..+..|++.++..  +.
T Consensus        22 Gvs~Vs~e-v~~a~~~~~---~~-F~em~~ls~~tGe~~ar~lgvEda----yIts~AsAGia~~vAali~~g~~ar~~~   92 (391)
T TIGR01437        22 GVSKVSDE-VLEATKYVS---DI-FIEMDDLSRKTGEYIARRLGVEDA----YITSGASAGIALAVAALISKGTRARVIK   92 (391)
T ss_pred             CCCHHHHH-HHHHHHHHH---HH-CEEHHHHHHHHHHHHHHHHCCCHH----HHHHHHHHHHHHHHHHHHCCCCCCEEEC
T ss_conf             66403699-999987565---51-010899999999999988443067----8898788899999999751676320110


Q ss_pred             EE--------------CC---HHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC-CCE-EEEE-EECCCCEEE
Q ss_conf             70--------------73---688888765323876306740577765786767----855-657-9974-202420220
Q gi|254780153|r   97 AW--------------ES---FGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD-RDV-VFVW-NGTTSGVCV  152 (391)
Q Consensus        97 ~~--------------g~---~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~v-~~~h-~ETstGv~~  152 (391)
                      ..              |+   |+.= .+.+-+.+|..+.... ..+ ......+    ++. +.+ ++-| +.--.++..
T Consensus        93 ~~i~e~g~~~~vv~~rgH~vdyg~P-V~~~i~~gGg~ivE~G-~~n-~~s~~~lE~~I~~kt~aiLyvksh~~vqk~ml~  169 (391)
T TIGR01437        93 DIIEEKGRKREVVLQRGHNVDYGAP-VEDLIALGGGRIVEVG-DEN-LVSEESLEETIKEKTAAILYVKSHHLVQKDMLL  169 (391)
T ss_pred             CHHHCCCCEEEEEEECCCCCCCCCC-HHHHHHCCCCCEEEEC-CCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             1032033400678627874567880-8999961899489977-888-756789999997734675556532135766666


Q ss_pred             CCEEE--ECCCCCCEEEEEECCHHHHC-CCC---CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC--CCCC
Q ss_conf             32035--02568614886401101102-545---5685799970012001766515445677888765411445--7783
Q gi|254780153|r  153 PDVGF--IPESREGLVICDATSAVFAR-HID---FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS--WPLP  224 (391)
Q Consensus       153 ~~~~~--~~~~~~~llivD~vSs~g~~-p~d---~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~--~~~~  224 (391)
                      |+.+.  +++.+..++||||-.-+.-. ++.   ..+-|+++-|.-|+|++|+--|+++-+++.+..++...+.  ..-|
T Consensus       170 P~~~~~~vA~~~~vPlIVDAAAeiPP~edL~~y~~~GaDlViYSGaKa~~gpsnsGl~vGrK~~I~~~~~~g~gseenGP  249 (391)
T TIGR01437       170 PVEEVIRVAQSYKVPLIVDAAAEIPPEEDLTRYLKAGADLVIYSGAKALEGPSNSGLVVGRKDYIAAAKSQGKGSEENGP  249 (391)
T ss_pred             CHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCC
T ss_conf             38999999975689889862568988014689997168755532034504643263233008899999862887656689


Q ss_pred             CHH--HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCC
Q ss_conf             123--20011232103347864466644889999999986201031899999999779999999874797-167668820
Q gi|254780153|r  225 KIF--RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW-IENLAVDET  301 (391)
Q Consensus       225 ~~~--~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~-~~~~~~~~~  301 (391)
                      +--  -...-+|..             =-.|.++..+++.++. ++=+.+.++.+++.+-+-+.|..... ....+.|+.
T Consensus       250 DGtrvfIgRaMKIg-------------Ke~ivg~v~AvE~yl~-~~~e~~~~k~~~~l~p~a~aIs~i~~l~a~iv~D~a  315 (391)
T TIGR01437       250 DGTRVFIGRAMKIG-------------KENIVGLVAAVERYLT-FNDEDWLRKQRSRLDPIAEAISDIDDLMAKIVQDEA  315 (391)
T ss_pred             CCCEEEEECCCCHH-------------HHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
T ss_conf             86568873265103-------------6899999999999851-687267899999843699998524101123567688


Q ss_pred             C---CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             0---3653178982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r  302 T---RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       302 ~---rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      .   |.--...+++..        ..-....+++...|..+.+.+.+..|+.....|.. ..-.+.++|+...++-|..-
T Consensus       316 gnhPR~i~r~rV~v~~--------~~~Gl~A~eV~~~Lk~~~~aIYtr~YQ~~~G~~~l-dpr~v~e~e~~~Iv~rL~eI  386 (391)
T TIGR01437       316 GNHPRDIYRARVKVDA--------EEGGLSADEVISRLKAERVAIYTREYQLLDGVLEL-DPRSVKEDEMALIVDRLSEI  386 (391)
T ss_pred             CCCCCCEEEEEEEEEC--------CCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEEE-CCCCCCCCCHHHHHHHHHHH
T ss_conf             9888543688889822--------22476789999985079995002245544885887-66113614168999989999


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r  379 FY  380 (391)
Q Consensus       379 ~~  380 (391)
                      ..
T Consensus       387 ~~  388 (391)
T TIGR01437       387 VE  388 (391)
T ss_pred             HH
T ss_conf             86


No 285
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.33  E-value=0.0003  Score=46.38  Aligned_cols=335  Identities=13%  Similarity=0.063  Sum_probs=156.4

Q ss_pred             CCCCCCCCCCCCCCC-CCC--CCHHHHHHHHHHHCCC--------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             556468998886888-776--8968999986321036--------53289889999999999999996889985799974
Q gi|254780153|r    5 RKPTRKPKRPFFSSG-PCA--KRPGWSLGILEGALLG--------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVP   73 (391)
Q Consensus         5 ~~~~~~p~~~~F~pG-P~~--~~p~~v~~~~~~~~l~--------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~   73 (391)
                      -.....|+-++|+-| |.-  -+|+.+.+++.+.+-.        .+--+.=..++-+.+-+.+++-++++-+-+=++++
T Consensus        24 ~~~~~~P~vIsl~~G~P~~~p~~~~~~~~a~~~~l~~~~~~~~~~qY~~~~G~~eLReaIA~~~~~~~g~~~~pd~I~vT  103 (416)
T PRK09440         24 NDGLRTPGAIMLGGGNPAHIPEMEDYFRDLLAELLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPENIALT  103 (416)
T ss_pred             HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEC
T ss_conf             99738998488179689888982299999999998468666544788999870999999999999984899983009984


Q ss_pred             CCCHHHHHHHHHHCCCCCCE-----EEEE-ECCHHH-HHHHHHH-HCCCCCEEEEECCC---CCCCCHHHCCC---CCCE
Q ss_conf             87348999875320578970-----7997-073688-8887653-23876306740577---76578676785---5657
Q gi|254780153|r   74 ASDTGAVEMALWSLLGYRGV-----DVLA-WESFGL-GWMSDIR-QLSLQDVREFTAPY---GSLPDFSKVDF---DRDV  139 (391)
Q Consensus        74 GsgT~~~ea~~~nl~~~~~~-----~~~~-~g~~~~-r~~~~~~-~~~~~~~~~~~~~~---g~~~~~~~~~~---~~~v  139 (391)
                      .|++.++..++.-|+.+++.     +++. +=.|-. .-+.... ........+...+.   ...++++.++.   .+.+
T Consensus       104 ~Gaqqal~l~~~~l~~pgd~~~~~~vl~p~~P~Y~~Y~~~~l~~~~~~~~~p~i~~~~~~~~~~~~d~~~l~~~~~t~~i  183 (416)
T PRK09440        104 NGSQSAFFYLFNLFAGRRADGSLKKILLPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLDIDEETGAI  183 (416)
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCEECCCEEEECCCCCCCCCCCHHHHHCCCCCEEE
T ss_conf             87899999999996476788776438972698654447777500650000560576687565678898997177784399


Q ss_pred             EEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECCHH-------HHCCCCCCCCEEEEECCHHCCCCCCCC--EEEE
Q ss_conf             997420242022032035-----02568614886401101-------102545568579997001200176651--5445
Q gi|254780153|r  140 VFVWNGTTSGVCVPDVGF-----IPESREGLVICDATSAV-------FARHIDFNKLDVVTFSAQKVLGGEAGF--GIII  205 (391)
Q Consensus       140 ~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs~-------g~~p~d~~~iDv~~a~sQK~l~~ppGl--~~v~  205 (391)
                      .++.-..-||...+..+.     ++..++.++|.|-+=+.       ...+..+.+--+.+.|.-| + +-||+  |.++
T Consensus       184 i~~~P~NPTG~v~s~e~~~~l~~la~~~~i~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK-~-~~pG~RiG~~v  261 (416)
T PRK09440        184 CVSRPTNPTGNVITDEELAKLDALARQHNIPLIIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSK-L-GLPGVRCGIVI  261 (416)
T ss_pred             EECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCC-C-CCCCCCEEEEE
T ss_conf             977898998877889999999999998795899978987778763315567667898899745112-0-28654258996


Q ss_pred             ECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH-----HHHHHHHHH
Q ss_conf             677888765411445778312320011232103347864466644889999999986201031899-----999999779
Q gi|254780153|r  206 LSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSA-----CVERCNANA  280 (391)
Q Consensus       206 ~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~-----~~~r~~~~a  280 (391)
                      ..++.++++...+..                      ... .++.+.-++....|+    .|.+..     +...++++.
T Consensus       262 ap~~~i~~l~~~~~~----------------------~~~-~~~~~~Q~~a~~~l~----~~~~~~~~~~~~r~~y~~rr  314 (416)
T PRK09440        262 ANEEIIEALTNMNGI----------------------ISL-APGRLGPAIAAELIE----SGDLLRLSETVIRPFYRQKV  314 (416)
T ss_pred             CCHHHHHHHHHHHHH----------------------HCC-CCCHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHH
T ss_conf             899999999999976----------------------348-856999999999997----79689999999999999999


Q ss_pred             HHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCC------
Q ss_conf             9999998747-971676688200365317898247310113734567888999998886282872665--5676------
Q gi|254780153|r  281 AVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDA------  351 (391)
Q Consensus       281 ~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~------  351 (391)
                      +.+.+.+.+. +.....+..|+  +-.-+-+.+++-..   +       ...+...+.++|+++--|.  |...      
T Consensus       315 ~~~~~~L~~~l~~~~~~~~~P~--Ggff~wv~~p~~~~---~-------~~~l~~~l~e~gV~vvPG~~F~~g~~~~~~~  382 (416)
T PRK09440        315 QLAIALLRRALPDLPCLIHKPE--GAIFLWLWFKDLPI---T-------TEELYQRLKARGVLIVPGHYFFPGLDEPWPH  382 (416)
T ss_pred             HHHHHHHHHHCCCCCEEEECCC--CCEEEEEECCCCCC---C-------HHHHHHHHHHCCEEEEECHHHCCCCCCCCCC
T ss_conf             9999999985789814885798--24699998899998---9-------9999999997997998264317999876557


Q ss_pred             C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             7-505686158889999999999999999999
Q gi|254780153|r  352 P-LGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       352 ~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      + ..+|++.-  .++++|+.-++-|-.+.++.
T Consensus       383 ~~~~lRlsfa--~~~e~i~egi~RLa~~i~~~  412 (416)
T PRK09440        383 THQCIRMSYV--QDDEEIEKGIAILAEEVEKA  412 (416)
T ss_pred             CCCEEEEEEC--CCHHHHHHHHHHHHHHHHHH
T ss_conf             7886999827--99999999999999999999


No 286
>PRK06855 aminotransferase; Validated
Probab=98.31  E-value=0.00034  Score=46.06  Aligned_cols=253  Identities=10%  Similarity=0.056  Sum_probs=130.1

Q ss_pred             CHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             968999986321036-5328---988999999999999999688998-57999748734899987532057897079970
Q gi|254780153|r   24 RPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAW   98 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~   98 (391)
                      .|+.+.+++...++. .+|+   +.=..++=+.+-+.+++-++++-+ -+|++ +.|++.++.+ ++.++.+|+.+++-+
T Consensus        49 tP~~i~ea~~~a~~~~~~~~Yt~s~G~~eLReaIA~~~~~~~g~~~~pd~I~v-t~Ga~~ai~~-~~~~l~pgdeVlip~  126 (433)
T PRK06855         49 IPLWMKEIVSELVMDDKSYGYCPTRGVLETREFLAELTNKRGGAQITPDDILF-FNGLGDAIAK-IYGFLRREARVLGPS  126 (433)
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEE-ECCHHHHHHH-HHHHCCCCCEEEECC
T ss_conf             88899999999985899988699888499999999999987399998789889-5776999999-999628999899627


Q ss_pred             CCHHHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCCC-------CCEEEEEEECCCCEEECCEE-----EECCCCCCE
Q ss_conf             736888887653238763067-40577765786767855-------65799742024202203203-----502568614
Q gi|254780153|r   99 ESFGLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDFD-------RDVVFVWNGTTSGVCVPDVG-----FIPESREGL  165 (391)
Q Consensus        99 g~~~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~-------~~v~~~h~ETstGv~~~~~~-----~~~~~~~~l  165 (391)
                      =+|-......+...+...+.. .....+..+++++++..       +.+.+..=..-||...+...     .+|.+++..
T Consensus       127 P~Yp~Y~~~~~~~~g~~pv~~~l~~e~~f~~d~e~l~~~i~~~~~~kaiii~nP~NPTG~v~s~e~l~~i~~~a~~~~i~  206 (433)
T PRK06855        127 PAYSTHSSAEAAHAGCEPVTYRLDPEDNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLF  206 (433)
T ss_pred             CCCCCCHHHHHHHCCCEEEEEECCHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf             88735099999968986899955710187789999999986699724999838999988667999999999999975986


Q ss_pred             EEEEECCHHHHC----CCCC----CCC-EEEEECCHHCCCCCCCCEEEEE------CHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf             886401101102----5455----685-7999700120017665154456------778887654114457783123200
Q gi|254780153|r  166 VICDATSAVFAR----HIDF----NKL-DVVTFSAQKVLGGEAGFGIIIL------SPASVERLEKYVPSWPLPKIFRMV  230 (391)
Q Consensus       166 livD~vSs~g~~----p~d~----~~i-Dv~~a~sQK~l~~ppGl~~v~~------s~~al~~~~~~~~~~~~~~~~~~~  230 (391)
                      +|.|-+=.-...    +...    .++ .+.+-|.-|.++. +|.=+=++      ++..+.+.              ..
T Consensus       207 visDEiY~~l~ydg~~~~s~~~~~~~~~~i~~ns~SK~~~m-tGwRiG~~~~~~~~~~~~~~~~--------------~~  271 (433)
T PRK06855        207 IIADEIYANIVYNGKKTVPLSEVIGDVPGIALKGISKELPW-PGSRCGWIEVYNAEKDPVFKKY--------------IK  271 (433)
T ss_pred             EEEECCCCCCEECCCCCCCHHHHCCCCCEEEEEEEHHCCCC-CCCCEEEEEEECCCCHHHHHHH--------------HH
T ss_conf             98631011245489876388996675773798200103897-6312678863157736999999--------------99


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r  231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD  299 (391)
Q Consensus       231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~  299 (391)
                      ...+.   .....   .+++..-++...++..-..+.=++.+.+.++++++.+++.+.+.+++....++
T Consensus       272 ~i~~~---~~~~~---cs~~~~Q~a~~a~l~~~~~~~~~~e~~~~y~~RRd~l~~~L~~ipGv~~~~P~  334 (433)
T PRK06855        272 SILDA---KMIEV---CSTTLPQKAIPAIMSHPEYKPYLEERNSRYEKRSNIAYEYLKDIPGLKVNRTN  334 (433)
T ss_pred             HHHHH---HHCCC---CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf             99987---74275---81389999999985598437999999999999999999999569993716997


No 287
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.29  E-value=0.00024  Score=47.05  Aligned_cols=289  Identities=14%  Similarity=0.116  Sum_probs=158.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHCCCCCEEEEEC---C-
Q ss_conf             999999999999688998579997487348999875320578970799-70736888887653238763067405---7-
Q gi|254780153|r   49 RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL-AWESFGLGWMSDIRQLSLQDVREFTA---P-  123 (391)
Q Consensus        49 i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~-~~g~~~~r~~~~~~~~~~~~~~~~~~---~-  123 (391)
                      ..+++++..+++|+....   +|+..|-|++..++++.++.+||.+++ -|.+-|.--.-+.+  + +....++.   + 
T Consensus        71 ~i~eAqe~aA~~fgAd~t---yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glila--G-a~Pvyl~p~~np~  144 (557)
T COG1982          71 PIKEAQELAARVFGADHT---YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILA--G-ATPVYLEPSRNPL  144 (557)
T ss_pred             CHHHHHHHHHHHHCCCCE---EEEECCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC--C-CCEEEECCCCCCC
T ss_conf             388999999998688862---999778228999999860389998996587637888899874--8-8327841777854


Q ss_pred             CCCC--CCHHHCCC------CC-CEEEEEEECCCCEEECCEEEE--CCCCCCEEEEEECCHHH--HCC----CCC-CCCE
Q ss_conf             7765--78676785------56-579974202420220320350--25686148864011011--025----455-6857
Q gi|254780153|r  124 YGSL--PDFSKVDF------DR-DVVFVWNGTTSGVCVPDVGFI--PESREGLVICDATSAVF--ARH----IDF-NKLD  185 (391)
Q Consensus       124 ~g~~--~~~~~~~~------~~-~v~~~h~ETstGv~~~~~~~~--~~~~~~llivD~vSs~g--~~p----~d~-~~iD  185 (391)
                      +|..  .+.+.++.      .. ..+++.|.|=.|+..+...++  .+..++.+.+|---.+-  -.+    -.. .+.|
T Consensus       145 ~gi~ggI~~~~~~~al~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~  224 (557)
T COG1982         145 YGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGAD  224 (557)
T ss_pred             CCCCCCCCHHHHHHHHHHCHHHHHEEEEECCCCCEEEECHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCHHHHCCCE
T ss_conf             46537869899879998471304068896485324760599999997531866888645774335555574114545743


Q ss_pred             EEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             99970012001766515445677888765411445778312320011232103347864466644889999999986201
Q gi|254780153|r  186 VVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKK  265 (391)
Q Consensus       186 v~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~  265 (391)
                      ++.-|.+|-|++-+--|.+-+...               +..+.....++...   .+  -|-|-..+.|-..+.+..++
T Consensus       225 ~~tqS~HK~l~alSQaS~iHv~~~---------------~~~~~~r~nea~~~---h~--STSPsY~l~ASlD~Ar~~~~  284 (557)
T COG1982         225 FVTQSTHKLLAALSQASMIHVKDG---------------RAVNHERFNEALMM---HQ--STSPSYPLMASLDVARMQEG  284 (557)
T ss_pred             EEEEEHHHHHHHHHHHHHHHHCCC---------------CCCCHHHHHHHHHH---HC--CCCCHHHHHHHHHHHHHHHH
T ss_conf             898105442123436678750887---------------65778999999998---80--67955899988999998754


Q ss_pred             CCCHHHH---HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-----------------CCCCEEEEEECCCCCCCCCHHHH
Q ss_conf             0318999---999997799999998747971676688200-----------------36531789824731011373456
Q gi|254780153|r  266 MGGLSAC---VERCNANAAVLFQFIQENDWIENLAVDETT-----------------RSNTSICMKIVDSDIASLDINSQ  325 (391)
Q Consensus       266 ~gGl~~~---~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~-----------------rS~~~v~~~~~d~~~~~~~~~~~  325 (391)
                      ..|-.-+   ..+.-+.++.+++.+...+++..+.+++..                 -=++=+++.+++          .
T Consensus       285 ~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~----------~  354 (557)
T COG1982         285 NAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPE----------F  354 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC----------C
T ss_conf             334788888899999999999998876488640266555775332221223445420366079996577----------8


Q ss_pred             HHHHHHHHHHHHHCCEEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             78889999988862828726-6556767505686158889999999999999
Q gi|254780153|r  326 KSFCKSMLSFLEKEEIAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       326 ~~~~~~~~~~l~~~g~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      +.-...+.++|.+++++..- +-+..   -|=++.+......+|+.|++++.
T Consensus       355 Gipg~~v~~~L~e~gii~e~~~d~~~---lll~~~~~gk~~~lv~~L~~f~r  403 (557)
T COG1982         355 GIPGAIVAKYLREHGIIPEETGDYSN---LLLFSPGIGKWQTLVDRLLEFKR  403 (557)
T ss_pred             CCCHHHHHHHHHHCCCEEEECCCCEE---EEEEEECCCHHHHHHHHHHHHHH
T ss_conf             97399999999975881453177324---67863241067899999999987


No 288
>KOG1401 consensus
Probab=98.29  E-value=0.00037  Score=45.80  Aligned_cols=325  Identities=16%  Similarity=0.038  Sum_probs=173.9

Q ss_pred             CCCCCCCCHHHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH-----HCCCC
Q ss_conf             8887768968999986321036532898-89999999999999996889985799974873489998753-----20578
Q gi|254780153|r   17 SSGPCAKRPGWSLGILEGALLGRSHRCV-LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW-----SLLGY   90 (391)
Q Consensus        17 ~pGP~~~~p~~v~~~~~~~~l~~sHRs~-~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~-----nl~~~   90 (391)
                      ++|++  .|+ +.++|..++...+|-+- .|..=--++.+.|-+..+-+.--+|+| .-|||.|.|+++-     +....
T Consensus        69 ~~Gha--npe-v~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff-~nsGTeAne~ALK~Ark~~~~~~  144 (433)
T KOG1401          69 ILGHA--NPE-VARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFF-CNSGTEANETALKFARKFTGKKH  144 (433)
T ss_pred             CCCCC--CHH-HHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEE-ECCCCHHHHHHHHHHHHHHCCCC
T ss_conf             55889--989-999999987553440475320888999999974235687417999-56972899999999998635347


Q ss_pred             C-C--EEEEEECCHHHHHHHHHH-----HCCCC----CEEEEECCCCCCCCHHH-CCCCC-CEEEEEEECCCCE--EECC
Q ss_conf             9-7--079970736888887653-----23876----30674057776578676-78556-5799742024202--2032
Q gi|254780153|r   91 R-G--VDVLAWESFGLGWMSDIR-----QLSLQ----DVREFTAPYGSLPDFSK-VDFDR-DVVFVWNGTTSGV--CVPD  154 (391)
Q Consensus        91 ~-~--~~~~~~g~~~~r~~~~~~-----~~~~~----~~~~~~~~~g~~~~~~~-~~~~~-~v~~~h~ETstGv--~~~~  154 (391)
                      . +  ..+-..|+|-+|-...+.     .++..    ..++...+++....+++ ++..+ .++.+-.|-.+|-  ..|.
T Consensus       145 ~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~e~~~~~IaAvIvEPiqGaGG~~p~  224 (433)
T KOG1401         145 PEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPA  224 (433)
T ss_pred             CCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
T ss_conf             76641289985675776236667523466688887779853530558899999999847885689997134578886569


Q ss_pred             -------EEEECCCCCCEEEEEECCHHHHCCCCCC-----CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf             -------0350256861488640110110254556-----8579997001200176651544567788876541144577
Q gi|254780153|r  155 -------VGFIPESREGLVICDATSAVFARHIDFN-----KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       155 -------~~~~~~~~~~llivD~vSs~g~~p~d~~-----~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~  222 (391)
                             ...+|.++++++|.|=|.+=.++-=+.|     ++-=.++...|.|++===++.++++++-.+...   +.. 
T Consensus       225 ~peFl~~l~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~---~~~-  300 (433)
T KOG1401         225 DPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMIS---PGD-  300 (433)
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCHHHHHHHHCCCCCEEEEHHHCCCCCEEEEEEEHHHHHHHCC---CCC-
T ss_conf             8899999999986159669960343176535527788885869760231020368851578865577886518---888-


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                               +      -..+.|+.-- .....+-..+|+|+...+-+.++-+..+...+.+++.+.+.+-..    .-..
T Consensus       301 ---------~------l~hg~Tf~gn-pLacs~~~~~l~~l~~pe~~k~vs~~~k~L~~~l~e~~~~~~~~i----~g~~  360 (433)
T KOG1401         301 ---------H------LYHGGTFSGN-PLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSI----CGGV  360 (433)
T ss_pred             ---------C------CCCCCCCCCC-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE----EEEE
T ss_conf             ---------6------5557665788-055548899999871889999898887899999999864798743----6775


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEC----CCCCCHHHHHHHHHHHHHH
Q ss_conf             365317898247310113734567888999998886282872665567675056861----5888999999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV----GVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~----~g~i~~~dv~~L~~aLe~~  378 (391)
                      .+-+++-+....|...-.+.   ......+.          ...++-....++||--    -...++|+++.+++.+++.
T Consensus       361 grgl~ig~~~~~p~~~~~d~---~~~~~ll~----------~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~k~  427 (433)
T KOG1401         361 GRGLVIGFEFEGPVYKFADA---AREQGLLI----------LTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKV  427 (433)
T ss_pred             EEEEEEEEEEECCHHHHHHH---HHHHHHHH----------HHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             25889989983050543013---44556888----------876324622517995552010568689999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  379 FYFQ  382 (391)
Q Consensus       379 ~~~~  382 (391)
                      ....
T Consensus       428 l~~l  431 (433)
T KOG1401         428 LSAL  431 (433)
T ss_pred             HHHH
T ss_conf             9874


No 289
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=98.25  E-value=0.00045  Score=45.32  Aligned_cols=301  Identities=15%  Similarity=0.027  Sum_probs=155.4

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-C--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             99999999999999968899857999748734899987532057-8--97079970736888887653238763067405
Q gi|254780153|r   46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-Y--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTA  122 (391)
Q Consensus        46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~  122 (391)
                      ..+.+=+-+..+.+|.+.+=.. .=++ -+||.+-||+.|..-- +  +.++++...-+-+.+.-.-......+..+...
T Consensus       108 ~LqalfefQtmi~eLTGmdvaN-ASly-D~aTA~aEA~~ma~r~~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~~  185 (429)
T pfam02347       108 RLEALLNFQTMVCDLTGLDVAN-ASLL-DEGTAAAEAMALAARISKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVEV  185 (429)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCC-CCCC-CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf             9999999999999985887568-7666-6788999999998765157887799828878318999997542279579996


Q ss_pred             CCCCCCCHHHCC-CCCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEE--EECCHHHHC-CCCCCCCEEEEECCH----
Q ss_conf             777657867678-55657997420242022032035--02568614886--401101102-545568579997001----
Q gi|254780153|r  123 PYGSLPDFSKVD-FDRDVVFVWNGTTSGVCVPDVGF--IPESREGLVIC--DATSAVFAR-HIDFNKLDVVTFSAQ----  192 (391)
Q Consensus       123 ~~g~~~~~~~~~-~~~~v~~~h~ETstGv~~~~~~~--~~~~~~~lliv--D~vSs~g~~-p~d~~~iDv~~a~sQ----  192 (391)
                      +....   ...+ ......++.+=+..|+.-+..++  ++|+.++++||  |-.| ++.. +=-.++.|+++..+|    
T Consensus       186 ~~~~~---~~~~~~~~a~v~~q~Pn~~G~ied~~~i~~~~h~~gal~iv~~dpls-L~ll~~Pg~~GaDI~vG~~Q~lGi  261 (429)
T pfam02347       186 DLTEE---GFSDEGDVFGVLVQYPNTEGRIEDYKELIEIAHQHGSLVVVAADLLA-LTILKPPGEFGADIVVGSAQRFGV  261 (429)
T ss_pred             CCCCC---CCCCCCCEEEEEEECCCCCCCEECCHHHHHHHHHCCCEEEEEECHHH-HCCCCCCCCCCCCEEEECCCCCCC
T ss_conf             72001---45555476899993799983172349999998645966999807799-607689765663379725765788


Q ss_pred             -HCCCCCCCCEEEEECHHHHHHHHHCC----CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHC
Q ss_conf             -20017665154456778887654114----45778312320011232103347864466644889999999--986201
Q gi|254780153|r  193 -KVLGGEAGFGIIILSPASVERLEKYV----PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDA--LLWLKK  265 (391)
Q Consensus       193 -K~l~~ppGl~~v~~s~~al~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~--l~~i~~  265 (391)
                       .++|| |.+++...+++...+....-    ....--.-+.+....+...-.+..-|-|.-.-..+.++..+  +-|+=.
T Consensus       262 pm~fGG-P~~gf~a~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~Y~~~~Gp  340 (429)
T pfam02347       262 PMGYGG-PHAGFFAVKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP  340 (429)
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
T ss_conf             878898-8200154488899749976446775889987336541243430334442034650089999999999998697


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECC
Q ss_conf             03189999999977999999987479716766882003653178982473101137345678889999988862828726
Q gi|254780153|r  266 MGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDI  345 (391)
Q Consensus       266 ~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  345 (391)
                       .|+..+.+++..++..+.+.+.+.+++..  ..+.+. .++ +.... +.           ..+.+.+.....|+  ++
T Consensus       341 -~GL~~iA~~~~~~A~yl~~~L~~~~g~~~--~~~~Ff-d~v-~~~~~-~~-----------~~~~l~~~~i~~G~--~l  401 (429)
T pfam02347       341 -KGLKEIARRIHSLTLYLAKGLKKLAGHEL--DHDHFF-DTL-KITVE-DR-----------AAEELLKRAEKGGI--NL  401 (429)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHCCCEEC--CCCCCC-CEE-EEECC-CH-----------HHHHHHHHHHHCCC--CE
T ss_conf             -88999999999999999999986699766--799962-159-99628-27-----------89999999997799--73


Q ss_pred             CCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             65567675056861588899999999999
Q gi|254780153|r  346 GSYRDAPLGLRVWVGVTVEKEDLLLLCDW  374 (391)
Q Consensus       346 ~~~r~~~~~~RIg~~g~i~~~dv~~L~~a  374 (391)
                      . +...+ .+-|+.-=..+.+||++|+++
T Consensus       402 ~-~~~~~-~~li~vtE~~T~edId~Lv~~  428 (429)
T pfam02347       402 R-YVDLG-TVGIALDETTTKEDVDALLKV  428 (429)
T ss_pred             E-ECCCC-EEEEEECCCCCHHHHHHHHHH
T ss_conf             6-53899-499996479999999999975


No 290
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase; InterPro: IPR006238   This group of sequences represent cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys..
Probab=98.25  E-value=9.5e-05  Score=49.59  Aligned_cols=216  Identities=18%  Similarity=0.224  Sum_probs=132.7

Q ss_pred             CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--HCCCCCC----EEEEEECCHHH--HHHHHHHH
Q ss_conf             289-889999999999999996889985799974873489998753--2057897----07997073688--88876532
Q gi|254780153|r   41 HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW--SLLGYRG----VDVLAWESFGL--GWMSDIRQ  111 (391)
Q Consensus        41 HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~--nl~~~~~----~~~~~~g~~~~--r~~~~~~~  111 (391)
                      -|| .+=...++   ..|.+|.++|.+ .++. =+||-+|.+++..  -++++||    .++.-..-||+  |....+..
T Consensus        44 sRSGNPTR~~Le---~~~AkL~~aPq~-~al~-~sSGMaAL~~~~~Glv~L~~GdnhtP~i~AgdDlYGG~~RLL~~~~~  118 (415)
T TIGR01329        44 SRSGNPTRTALE---SLLAKLEKAPQE-RALA-VSSGMAALDVITRGLVLLNAGDNHTPEIIAGDDLYGGTDRLLTQLAS  118 (415)
T ss_pred             CCCCCHHHHHHH---HHHHHHHCCCCC-CEEE-EECCHHHHHHHHHEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf             468980478999---998865127535-3588-86136799886411456607888677078437456504789999743


Q ss_pred             CCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEE-----ECCCCC--CEEEEE--ECCHHHHCC
Q ss_conf             3876306740577765786767----855657997420242022032035-----025686--148864--011011025
Q gi|254780153|r  112 LSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGF-----IPESRE--GLVICD--ATSAVFARH  178 (391)
Q Consensus       112 ~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~--~llivD--~vSs~g~~p  178 (391)
                      .-+..+..+...     +++++    ...+.+.++|-||-|==+..+..+     .+|..+  ++++||  ++|-+.+.|
T Consensus       119 ~~G~vv~~V~t~-----~~d~v~~~l~~~P~~~lv~LESPTNPl~~ivDI~~i~~~ah~~~~~~~V~vDNtmmSPl~c~P  193 (415)
T TIGR01329       119 RSGVVVVHVDTT-----DLDKVKAVLGDLPKTKLVLLESPTNPLIKIVDIRKIAEAAHALNEDALVVVDNTMMSPLLCNP  193 (415)
T ss_pred             CCCEEEEECCCC-----CHHHHHHHHHCCCHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf             285289974898-----879999986068712076503888986246337899999985089718998222047667887


Q ss_pred             CCC-CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC--CHHHH
Q ss_conf             455-68579997001200176651--54456778887654114457783123200112321033478644666--44889
Q gi|254780153|r  179 IDF-NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP--SLLCI  253 (391)
Q Consensus       179 ~d~-~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP--~v~~i  253 (391)
                      ++- -++|++|=|+=|=|.|-.=+  |+++++...+.+.          -||-        +|.. |.-. .|  ...++
T Consensus       194 L~LnPGaD~v~~SATKfL~GH~D~MaGvl~~k~e~~~~~----------~yF~--------~Ns~-G~gL-aP~DswLLl  253 (415)
T TIGR01329       194 LELNPGADIVYESATKFLAGHSDVMAGVLAVKSEEIAKK----------VYFL--------INST-GAGL-APFDSWLLL  253 (415)
T ss_pred             CCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHH----------EEEE--------ECCC-CCCC-CHHHHHHHH
T ss_conf             566789757863534201464011335577737121000----------1112--------3366-7766-513589998


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             9999999862010318999999997799999998747971676
Q gi|254780153|r  254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL  296 (391)
Q Consensus       254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~  296 (391)
                      ++++          .+.-|.+|.++||..+-.||+++-+|.+.
T Consensus       254 RGik----------TLaiR~ekQq~NA~~iA~fL~nsCGfkP~  286 (415)
T TIGR01329       254 RGIK----------TLAIRLEKQQENAVAIALFLENSCGFKPT  286 (415)
T ss_pred             HHHH----------HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             6688----------88887989999999999986321688866


No 291
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.24  E-value=0.0003  Score=46.44  Aligned_cols=287  Identities=16%  Similarity=0.129  Sum_probs=142.7

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCC-CEEEEEECC
Q ss_conf             968999986321036532898899-99999999999996889985799974873489998753205-789-707997073
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYR-GVDVLAWES  100 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~-~~~~~~~g~  100 (391)
                      +|+ +.+++.+++=...|-++.|. +...+..+.|.++.    ++.-+++..|||.+.|+++.=.. -.+ ..++...++
T Consensus        42 ~p~-i~~ai~~ql~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~v~f~~SGseAve~AiklAr~~tgr~~ii~~~~~  116 (364)
T PRK04013         42 HPE-WVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV----NYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNA  116 (364)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC----CCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             889-99999999975576577636589999999975257----9788996388469999999998762799989996488


Q ss_pred             HHHHHHHHHHHCCCCCEE---------EEECCCCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC------EEEECC
Q ss_conf             688888765323876306---------7405777657867678--556579974202420---22032------035025
Q gi|254780153|r  101 FGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD------VGFIPE  160 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~------~~~~~~  160 (391)
                      |=++-..-...-+.....         ....|+   .+.+...  ..+.++.+-.|...|   +..+.      .+.+|+
T Consensus       117 yHG~t~g~ls~~~~~~~~~~~~~~~~~~~~~p~---~d~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~  193 (364)
T PRK04013        117 FHGRTMGALSATWKPKYREDFEPLVPGFKHIPF---NDVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTE  193 (364)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC---CCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             677866633445773334577899887055576---43999998726673599997677788862487799999999999


Q ss_pred             CCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf             686148864011011025---4--55685--7999700120017665--1544567788876541144577831232001
Q gi|254780153|r  161 SREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVK  231 (391)
Q Consensus       161 ~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~  231 (391)
                      ++++++|+|=|.+-. +-   +  +.+++  |++  ..-|+|++  |  ++.++.+.+.       ..            
T Consensus       194 ~~gillI~DEV~tGf-RtG~~~a~e~~gv~PDiv--~~gKglgg--G~Pl~av~~~~~i-------~~------------  249 (364)
T PRK04013        194 DVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIV--TMGKGIGN--GVPVSLTLTNFDV-------ER------------  249 (364)
T ss_pred             HCCCCEECCCCCCCC-CCCCCCHHHCCCCCCCEE--EECCCCCC--CCCCEEEEECCCC-------CC------------
T ss_conf             769976710230360-434302311589999899--96340008--8651899964101-------13------------


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf             123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r  232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M  310 (391)
Q Consensus       232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~  310 (391)
                             ...++|+.--|+. ..+..++|+.++++ ++-.   |..++   +.+ +..     ..+.  +.|...... +
T Consensus       250 -------~~h~~T~~Gnp~~-~aaa~a~L~ii~~e-~l~~---~~~~~---~~~-~~~-----~~v~--~vRG~GL~~gi  306 (364)
T PRK04013        250 -------GKHGSTFGGNPLA-CKAVAVTLRILRRE-RLVE---KAGEK---FIE-IKG-----ERVV--TTRGRGLMIGI  306 (364)
T ss_pred             -------CCCCCCCCCCHHH-HHHHHHHHHHHHHC-HHHH---HHHHH---HHH-HCC-----CCEE--EEECCCEEEEE
T ss_conf             -------7656755889899-99999999999866-3999---99999---998-565-----7008--98615379999


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      .+..|             ...+...+.++|+++...+.    ..+|+.--=.++.++++.++++||.++.+.
T Consensus       307 e~~~p-------------~~~~~~~~~~~G~l~~~~g~----~virl~PPL~it~~eid~~~~~l~~al~ev  361 (364)
T PRK04013        307 VLKKP-------------VGKYVEELQNRGYLVHTAGQ----RVIRLLPPLIISKDTMEEAKSAIEGVINDI  361 (364)
T ss_pred             EECCC-------------HHHHHHHHHHCCEEEEECCC----CEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf             97784-------------89999999959969963799----989998881378999999999999999998


No 292
>KOG1357 consensus
Probab=98.23  E-value=0.00019  Score=47.73  Aligned_cols=316  Identities=18%  Similarity=0.157  Sum_probs=171.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
Q ss_conf             8887768968999986321036--53289889999999999999996889985799974873489998753205789707
Q gi|254780153|r   17 SSGPCAKRPGWSLGILEGALLG--RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVD   94 (391)
Q Consensus        17 ~pGP~~~~p~~v~~~~~~~~l~--~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~   94 (391)
                      +.||+.  |. +.+++..--+.  -||+..--.++.+++.+...++++.|+  -++|-+|=||  ..+.+..|++++...
T Consensus       152 ~~g~ca--~~-~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~--a~vF~mGf~T--Ns~~~p~l~~~gsLI  224 (519)
T KOG1357         152 SVGPCA--EA-SLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVED--AIVFSMGFAT--NSMNIPSLLGKGSLI  224 (519)
T ss_pred             CCCCCC--HH-HHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCC--EEEEECCCCC--CCCCCCEEECCCCCE
T ss_conf             688776--18-9999998463336642003637888789999998668864--4897415434--556762244588616


Q ss_pred             EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC--------------CCCCCEEEEEEEC-CCC--EEECCEEE
Q ss_conf             997073688888765323876306740577765786767--------------8556579974202-420--22032035
Q gi|254780153|r   95 VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV--------------DFDRDVVFVWNGT-TSG--VCVPDVGF  157 (391)
Q Consensus        95 ~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------------~~~~~v~~~h~ET-stG--v~~~~~~~  157 (391)
                      +..  ..-.--..--++.-++.+.+.+-  +...+++.+              +..+.+.++-+=- -.|  +..|....
T Consensus       225 iSD--elNHaSi~~GaRLSgAtiRVfkH--Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vva  300 (519)
T KOG1357         225 ISD--ELNHASLITGARLSGATTRVFRH--NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVA  300 (519)
T ss_pred             EEH--HCCCHHEEECCCCCCCEEEEEEC--CCHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCEECCCHHHHH
T ss_conf             440--00330023030315854799863--88777999999887527877688502203420110105672116199887


Q ss_pred             ECCCCCCEEEEEECCHHHHCC-----------CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             025686148864011011025-----------455685799970012001766515445677888765411445778312
Q gi|254780153|r  158 IPESREGLVICDATSAVFARH-----------IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       158 ~~~~~~~llivD~vSs~g~~p-----------~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
                      +++++.+.+..|.-+|+|+++           .|...+|++-...-|-+++-.  +.+.-|++..+.......       
T Consensus       301 lkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G--Gyiagsk~lid~lrt~s~-------  371 (519)
T KOG1357         301 LKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG--GYIAGSKELIDYLRTPSP-------  371 (519)
T ss_pred             HHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHEEECCEEHHHCCCCC--CEECCCHHHHHHCCCCCC-------
T ss_conf             52043379984010002553788874223468882462022010021045666--600283887741004788-------


Q ss_pred             HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             32001123210334786446664488999999998620103---189999999977999999987479716766882003
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG---GLSACVERCNANAAVLFQFIQENDWIENLAVDETTR  303 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g---Gl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r  303 (391)
                        ...          ..+.-.||+  .-....+++-|..+-   +.....+|-.++++.++..+...+ +..+-   ..-
T Consensus       372 --~~~----------yat~~sppv--aqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-fivyG---~~d  433 (519)
T KOG1357         372 --SAL----------YATSLSPPV--AQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG-FIVYG---NND  433 (519)
T ss_pred             --CEE----------ECCCCCHHH--HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-EEEEC---CCC
T ss_conf             --424----------203678288--999998787524887640779999998750289987510482-89916---788


Q ss_pred             CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC---CEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             6531789824731011373456788899999888628287266556767---5056861588899999999999999999
Q gi|254780153|r  304 SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP---LGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       304 S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~---~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      |+++-.+....+.+            ..+...+.++++++=..++.--+   .-.|.=.--..+.||++.|+++++.+-.
T Consensus       434 SpVvplll~~~~k~------------~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~  501 (519)
T KOG1357         434 SPVVPLLLYGPAKI------------VAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD  501 (519)
T ss_pred             CCCCEEEECCCCCC------------CHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCH
T ss_conf             87643663275314------------078999986473599972799457776778654235557889999998866331


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r  381 FQ  382 (391)
Q Consensus       381 ~~  382 (391)
                      .+
T Consensus       502 ~~  503 (519)
T KOG1357         502 ED  503 (519)
T ss_pred             HH
T ss_conf             12


No 293
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.22  E-value=0.00052  Score=44.87  Aligned_cols=313  Identities=12%  Similarity=0.100  Sum_probs=166.3

Q ss_pred             CCCCCCCCCCC-------CCCCHHHHHHHHHHHCCCC--CC------CCHHHHHHHHHHHHHHHHHHCCC-----CCCEE
Q ss_conf             89988868887-------7689689999863210365--32------89889999999999999996889-----98579
Q gi|254780153|r   10 KPKRPFFSSGP-------CAKRPGWSLGILEGALLGR--SH------RCVLGKERINKAIQLTRKVLEVP-----ENYRI   69 (391)
Q Consensus        10 ~p~~~~F~pGP-------~~~~p~~v~~~~~~~~l~~--sH------Rs~~f~~i~~~~~~~l~~l~~~p-----~~y~v   69 (391)
                      -|...|-+.|-       +.+.|. |.++- ..+++.  +|      =.++|.+...+..      |+-.     ++.-+
T Consensus        25 ~p~KvnLgvGvYrde~G~~~vl~a-Vk~Ae-~~l~~~~~~k~Ylpi~G~~~f~~~~~~L~------fG~~~~~~~~~rv~   96 (397)
T PRK09257         25 RPDKVNLGVGVYKDEQGRTPVLRA-VKKAE-ARLLETETTKSYLPIEGLAAYNQAVQELL------FGADSPAIAAGRVA   96 (397)
T ss_pred             CCCCEEEEEEEEECCCCCCCCCHH-HHHHH-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH------CCCCCHHHHHCCEE
T ss_conf             967477302378999989166579-99999-99973789987879787799999999984------27875566625258


Q ss_pred             EEECCCCHHHHHHHHH--HCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHC----C--CCCCE
Q ss_conf             9974873489998753--205789707997073688888765323876306740--577765786767----8--55657
Q gi|254780153|r   70 AIVPASDTGAVEMALW--SLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKV----D--FDRDV  139 (391)
Q Consensus        70 ~~l~GsgT~~~ea~~~--nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~----~--~~~~v  139 (391)
                      -+-+-|||||.-...-  +-..++..+++.+=.|++.. .++...+. .+..+.  .+.....+++..    .  ...++
T Consensus        97 ~vQt~gGTGAlrl~a~fl~~~~p~~~v~is~PtW~Nh~-~If~~aGl-~v~~Y~y~d~~t~~ldf~~~~~~L~~a~~gsv  174 (397)
T PRK09257         97 TVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHR-AIFEAAGL-EVKTYPYYDAATKGLDFDGMLADLSQAPAGDV  174 (397)
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH-HHHHHCCC-EEEEEEEECCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf             88547753689999999998589986997699962038-99997798-05776556454576289999999982899998


Q ss_pred             EEEEE--ECCCCEEECCEEE-----ECCCCCCEEEEEEC-CHHHHC-CCCC--------CCCEEEE-ECCHHCCCCC---
Q ss_conf             99742--0242022032035-----02568614886401-101102-5455--------6857999-7001200176---
Q gi|254780153|r  140 VFVWN--GTTSGVCVPDVGF-----IPESREGLVICDAT-SAVFAR-HIDF--------NKLDVVT-FSAQKVLGGE---  198 (391)
Q Consensus       140 ~~~h~--ETstGv~~~~~~~-----~~~~~~~llivD~v-Ss~g~~-p~d~--------~~iDv~~-a~sQK~l~~p---  198 (391)
                      .+.|.  -.-||+.....++     +...++.+.++|+. ..|++- +=|.        ....+++ .|.-||||.-   
T Consensus       175 vlLh~ccHNPTG~D~t~eqW~~ia~~~~~k~l~p~~D~AYqGf~sGl~~Da~~iR~f~~~~~e~lva~SfSKnfgLY~eR  254 (397)
T PRK09257        175 VLLHGCCHNPTGADLTPEQWDEVAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRLFAAAGLELLVASSFSKNFGLYGER  254 (397)
T ss_pred             EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
T ss_conf             99725667988999899999999999996698688840014334668999999999997288579984037543334677


Q ss_pred             -CCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHCCCCHH
Q ss_conf             -65154456778887654114457783123200112321033478644666448899999999-------8620103189
Q gi|254780153|r  199 -AGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-------LWLKKMGGLS  270 (391)
Q Consensus       199 -pGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-------~~i~~~gGl~  270 (391)
                       .-+.++.-+++..++....           +...        -..++..||.++-......|       +|.+ |  ++
T Consensus       255 vG~l~vv~~~~~~~~~v~s~-----------l~~~--------~R~~~S~PP~hGA~iv~~IL~d~~L~~~W~~-E--l~  312 (397)
T PRK09257        255 VGALSVVAEDAEEAARVLSQ-----------LKAT--------IRTNYSNPPAHGAAIVATILNDPELRAEWEQ-E--LA  312 (397)
T ss_pred             CEEEEEEECCHHHHHHHHHH-----------HHHH--------HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH-H--HH
T ss_conf             50389981888899999999-----------9999--------9734588983899999999679999999999-9--99


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf             99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r  271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD  350 (391)
Q Consensus       271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~  350 (391)
                      .|..|...+++.+++.+.+.+.-..+..-...    .--|-+..     +.        ..-+..|.++-.+|-++    
T Consensus       313 ~m~~Ri~~~R~~L~~~L~~~~~~~~w~~i~~q----~GmFs~~g-----ls--------~~qv~~Lr~~~~IYl~~----  371 (397)
T PRK09257        313 EMRDRIKAMRQLLVEALKAKGPDRDFSFILRQ----RGMFSYSG-----LT--------PEQVDRLREEFGIYAVG----  371 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC----CCEEECCC-----CC--------HHHHHHHHHHCCEEECC----
T ss_conf             99999999999999999975899996267507----66056689-----79--------99999999847251469----


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             67505686158889999999999999999
Q gi|254780153|r  351 APLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       351 ~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
                         +-||++-| +++.+|+.+.+||+.+.
T Consensus       372 ---~GRIniaG-Ln~~ni~~vA~AI~~V~  396 (397)
T PRK09257        372 ---SGRINVAG-LNEDNIDYVAKAIAAVL  396 (397)
T ss_pred             ---CCEEEEEC-CCHHHHHHHHHHHHHHH
T ss_conf             ---95689820-77663899999999985


No 294
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.22  E-value=0.00054  Score=44.81  Aligned_cols=329  Identities=11%  Similarity=0.046  Sum_probs=155.2

Q ss_pred             CCCCCCCCC-CCCCHHHHHHHHHHHCCC--C---CCC-CH--HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHH
Q ss_conf             988868887-768968999986321036--5---328-98--8999999999999999688998-579997487348999
Q gi|254780153|r   12 KRPFFSSGP-CAKRPGWSLGILEGALLG--R---SHR-CV--LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVE   81 (391)
Q Consensus        12 ~~~~F~pGP-~~~~p~~v~~~~~~~~l~--~---sHR-s~--~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~e   81 (391)
                      +=.+|+-|= .--.|..|.+++..++-+  .   +|+ ++  =-.++-+.+-+.+++-+++.-+ .+|++ +.|+..++-
T Consensus        35 dvI~L~iGePdf~tP~~i~eA~~~a~~~~~~~~~~~gYt~~~G~~eLReAIa~~~~~~~g~~~~~~~I~v-t~Ga~~~l~  113 (409)
T PRK07590         35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDIDAEEIFV-SDGAKCDTG  113 (409)
T ss_pred             CEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEE-CCCHHHHHH
T ss_conf             8667889897899999999999999983012688785898747499999999999998489987688687-486799999


Q ss_pred             HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCC-CEEEEECCC------------CCCCCHHHCCCCCCEEEEEEECCC
Q ss_conf             8753205789707997073688888765323876-306740577------------765786767855657997420242
Q gi|254780153|r   82 MALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQ-DVREFTAPY------------GSLPDFSKVDFDRDVVFVWNGTTS  148 (391)
Q Consensus        82 a~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~-~~~~~~~~~------------g~~~~~~~~~~~~~v~~~h~ETst  148 (391)
                      + ++.++++||.+++-+=+|-...  ...+..+. .+......+            +..+++. .+..+.+.++.=..-|
T Consensus       114 ~-i~~ll~pGDeViip~P~Yp~Y~--~~~~laG~~~~~~~~~~~~~~~~~~~~~e~~f~~~~~-~~ktk~iilnsP~NPT  189 (409)
T PRK07590        114 N-ILDIFGPDNTIAVTDPVYPVYV--DTNVMAGRTGEANEDGRYEGIVYLPCTAENNFIPELP-SEKVDIIYLCFPNNPT  189 (409)
T ss_pred             H-HHHHHCCCCEEEECCCCCCCHH--HHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCC-CCCEEEEEECCCCCCC
T ss_conf             9-9998399998996688774469--8998748853013566556724655883435474356-5460299984898995


Q ss_pred             CEEECCEEE-----ECCCCCCEEEEEECCH-HHH---CCC-----C-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHH
Q ss_conf             022032035-----0256861488640110-110---254-----5-56857999700120017665--15445677888
Q gi|254780153|r  149 GVCVPDVGF-----IPESREGLVICDATSA-VFA---RHI-----D-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASV  211 (391)
Q Consensus       149 Gv~~~~~~~-----~~~~~~~llivD~vSs-~g~---~p~-----d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al  211 (391)
                      |...+..+.     +|.+++..+|.|-+=+ +..   .|.     + ..+.-+.+.|.-|.++ .+|  +|.++..+...
T Consensus       190 G~V~s~eel~~i~~~a~~~~i~iisDEiY~~~~~~~~~p~si~~~~~~~~~~I~i~s~SK~~~-mtGwRiG~~v~P~~l~  268 (409)
T PRK07590        190 GTVATKEQLKAWVDYAKANGSLILFDAAYEAFISDPSIPHSIYEIEGAKECAIEFRSFSKNAG-FTGTRCAYTVVPKELK  268 (409)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECHHHCC-CCCCCEEEEECCHHHH
T ss_conf             655799999999999987497899707620013689877577654655014689713526407-8644369897579999


Q ss_pred             HHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             76541144577831232001123210334786446664488999999998620103189999999977999999987479
Q gi|254780153|r  212 ERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND  291 (391)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~  291 (391)
                      .+.....       ..++....    +.....+.+..|+..-++...++..- .+.-++.+.+.++++++.+++.+...+
T Consensus       269 ~~~~~~~-------~~~~~~~~----~~~~~~~~~~~~~~~Q~aa~a~l~~~-~~~~~~~~~~~y~~rr~~~~~~L~~~g  336 (409)
T PRK07590        269 GKDSEGE-------IVDLNSLW----NRRQSTKFNGVSYIVQRGAEAVYSPE-GQAQIKELISYYMENAKIIREGLEAAG  336 (409)
T ss_pred             HHHHHHH-------HHHHHHHH----HHHHHCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             8864446-------99999999----98750255786899999999996548-789999999999999999999999759


Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHH
Q ss_conf             71676688200365317898247310113734567888999998-886282872665-5676750-56861588899999
Q gi|254780153|r  292 WIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDL  368 (391)
Q Consensus       292 ~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv  368 (391)
                       +....  +.. +. -+-+.+++ .   .+       ..++... +.+.|+++--|. +...|.+ +|++.-  .+.+++
T Consensus       337 -~~~~~--p~g-af-Y~w~~~~~-~---~~-------~~ef~~~Ll~e~~Vav~PG~~FG~~g~g~vRls~a--~~~e~l  398 (409)
T PRK07590        337 -FTVYG--GVN-AP-YIWVKTPD-G---LS-------SWDFFDKLLQEANVVGTPGSGFGPAGEGYFRLSAF--GSRENV  398 (409)
T ss_pred             -CEEEC--CCC-CE-EEEEECCC-C---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHH
T ss_conf             -76727--997-23-89888999-9---89-------89999999986999996864658999896999972--899999


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q gi|254780153|r  369 LLLCDWLR  376 (391)
Q Consensus       369 ~~L~~aLe  376 (391)
                      +.-++-|+
T Consensus       399 ~ea~~Ri~  406 (409)
T PRK07590        399 LEAMERIK  406 (409)
T ss_pred             HHHHHHHH
T ss_conf             99999999


No 295
>KOG1368 consensus
Probab=98.21  E-value=0.0004  Score=45.60  Aligned_cols=308  Identities=16%  Similarity=0.151  Sum_probs=160.8

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH-HCCCCCCEEEEEECC
Q ss_conf             6896899998632103653289889999999999999996889985799974873489998753-205789707997073
Q gi|254780153|r   22 AKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW-SLLGYRGVDVLAWES  100 (391)
Q Consensus        22 ~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~-nl~~~~~~~~~~~g~  100 (391)
                      .+|-..+.++|..+..|--  =..-..-..+......++|+-..   -+|.+ |||.+.-.+++ .+..++...++-.-.
T Consensus        32 T~PTdeMr~am~eA~vgDd--VyGeD~tt~rLE~~vA~l~GKEA---gLFv~-SGTmgNllaIm~Hc~~rg~eii~gd~~  105 (384)
T KOG1368          32 TVPTDEMRRAMAEASVGDD--VYGEDPTTNRLEQRVAELFGKEA---GLFVP-SGTMGNLLAIMVHCHQRGSEIIVGDRA  105 (384)
T ss_pred             CCCHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHHHHHHCCCC---EEEEC-CCCCCCHHHHHHHHCCCCCEEEECCCH
T ss_conf             6875999999864534752--13678518899999999847541---25632-665310788878744888557843610


Q ss_pred             HHHHH-HHHHHHCCCCCEEEEECCCCCCCCHHHCCCC----C-C--------EEE--EEEECCCCEEECCEEE-----EC
Q ss_conf             68888-8765323876306740577765786767855----6-5--------799--7420242022032035-----02
Q gi|254780153|r  101 FGLGW-MSDIRQLSLQDVREFTAPYGSLPDFSKVDFD----R-D--------VVF--VWNGTTSGVCVPDVGF-----IP  159 (391)
Q Consensus       101 ~~~r~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~-~--------v~~--~h~ETstGv~~~~~~~-----~~  159 (391)
                      .=.+| ..-+....+..+..++...+-..++++++..    + +        +++  +||. +-|...|++..     ++
T Consensus       106 HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~-~Gg~vlPle~~~~v~~la  184 (384)
T KOG1368         106 HIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNN-CGGKVLPLEELDRVKALA  184 (384)
T ss_pred             HEEEHHCCCHHHHCCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC-CCCEEEEHHHHHHHHHHH
T ss_conf             3212121672110461467543179975569999876218999735897317986213135-686674199999999999


Q ss_pred             CCCCCEEEEEECCHH-----HHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHH
Q ss_conf             568614886401101-----102545--5685799970012001766515445677888765411445778312320011
Q gi|254780153|r  160 ESREGLVICDATSAV-----FARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKG  232 (391)
Q Consensus       160 ~~~~~llivD~vSs~-----g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~  232 (391)
                      +.++..+=+|+.--+     .+.|+.  ...+|-+-.+-.|.||.|-| ++++-|++.+++..-....            
T Consensus       185 k~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA~~~RKa------------  251 (384)
T KOG1368         185 KRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKARHFRKA------------  251 (384)
T ss_pred             HCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC-CEEECCHHHHHHHHHHHHH------------
T ss_conf             615971533626665578771998999987632424355355788740-1787528899998999997------------


Q ss_pred             HHHHCCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             232103347864466--644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r  233 GRVMEGLFCGETINT--PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM  310 (391)
Q Consensus       233 ~~~~~~~~~~~~~~T--P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~  310 (391)
                             .-|.++..  -+...++++++.         +....+-|+ +++.+-+.+.+.+.+..-+  +...++++.. 
T Consensus       252 -------lGGGmRQsGvLaaaaLval~~~---------~~~L~~dHk-~A~~lAe~~~~~~~i~v~v--~a~etNiv~~-  311 (384)
T KOG1368         252 -------LGGGMRQSGVLAAAALVALDEN---------VPLLRADHK-RAKELAEYINTPEEIRVEV--PAVETNIVNM-  311 (384)
T ss_pred             -------HCCCHHHHHHHHHHHHHHHHCC---------HHHHHHHHH-HHHHHHHHHCCCCCEEEEC--CHHHCCEEEE-
T ss_conf             -------5686137779999889876312---------277787799-9999999864666634632--2131233211-


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8247310113734567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK  383 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k  383 (391)
                      .+..+.+          -...+.+.+.+.|+.+- ++   +-.-+||.....++++||+.++.+++-.|-.++
T Consensus       312 ~l~q~~~----------~~~~l~~~~~k~gi~lm-~~---~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~  370 (384)
T KOG1368         312 VLCQARL----------TAEELCKFLEKNGILLM-GG---ASRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL  370 (384)
T ss_pred             ECCCCCC----------CHHHHHHHHHHCCEEEE-EC---CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_conf             1025667----------89999988987785886-14---666248999984378999999999999998525


No 296
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636   This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC)  and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=98.21  E-value=0.00056  Score=44.68  Aligned_cols=310  Identities=16%  Similarity=0.126  Sum_probs=192.6

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCC----CCCEEEEECCCCHHHHHHHHHH---CC---C-CC
Q ss_conf             9689999863210365328988999-9999999999996889----9857999748734899987532---05---7-89
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVP----ENYRIAIVPASDTGAVEMALWS---LL---G-YR   91 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p----~~y~v~~l~GsgT~~~ea~~~n---l~---~-~~   91 (391)
                      +|. +.|++..++=--.|-|.-|.. -..++-+.|-++...-    |..+|+|.. |||.|+||++==   ..   . .+
T Consensus        47 hP~-l~Ea~~~Q~~kL~H~SNlY~~~~~~~LA~kLv~~~~~dgGqhd~~rvFFCN-SGaEAnEAAlKlARk~~~~~g~~k  124 (402)
T TIGR00707        47 HPK-LVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGADGGQHDASRVFFCN-SGAEANEAALKLARKYTGDKGKEK  124 (402)
T ss_pred             CHH-HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC-CHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             889-999999866240660776558089999999999970468830232667514-747899999999898640227886


Q ss_pred             CEEEEEECCHHHHHHHHHHHCCCCCEEEEE---------CCCCC-CCCHHH-CCCC--CC-EEEEEEECCCC--EEECC-
Q ss_conf             707997073688888765323876306740---------57776-578676-7855--65-79974202420--22032-
Q gi|254780153|r   92 GVDVLAWESFGLGWMSDIRQLSLQDVREFT---------APYGS-LPDFSK-VDFD--RD-VVFVWNGTTSG--VCVPD-  154 (391)
Q Consensus        92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~---------~~~g~-~~~~~~-~~~~--~~-v~~~h~ETstG--v~~~~-  154 (391)
                      ...+.-.+.|=+|-+.-++.-++.......         .+++. +..+++ ++..  .+ ++-+-.|+..|  -.+|. 
T Consensus       125 ~~ivaf~naFHGRT~g~LsaTgqpKy~~~F~PLvpgf~y~~yNDe~~~l~~~i~~~~eg~rtAAvivEpiQGEgGV~pa~  204 (402)
T TIGR00707       125 KKIVAFENAFHGRTMGALSATGQPKYQKPFEPLVPGFKYVPYNDEIEALKEAIDDEKEGDRTAAVIVEPIQGEGGVVPAD  204 (402)
T ss_pred             CEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC
T ss_conf             53888870776300454300477645685788423812444889789999985025778718899985321786533487


Q ss_pred             ------EEEECCCCCCEEEEEECCHHHHCCCC-----CCC--CEEEEECCHHCCCC-CCCCEEEEECHHHHHHHHHCCCC
Q ss_conf             ------03502568614886401101102545-----568--57999700120017-66515445677888765411445
Q gi|254780153|r  155 ------VGFIPESREGLVICDATSAVFARHID-----FNK--LDVVTFSAQKVLGG-EAGFGIIILSPASVERLEKYVPS  220 (391)
Q Consensus       155 ------~~~~~~~~~~llivD~vSs~g~~p~d-----~~~--iDv~~a~sQK~l~~-ppGl~~v~~s~~al~~~~~~~~~  220 (391)
                            .+.+|.++++|||+|=|++=.++-=.     --+  +.=.+..+-|+||+ -| ++.++++++.-+.   .   
T Consensus       205 ~~fL~a~r~lc~~~~~LLI~DEVQtG~GRTG~~fA~~Hygse~~PDi~T~AKgLGgG~P-iGA~~~~e~~a~~---~---  277 (402)
T TIGR00707       205 KEFLKALRELCEDKDALLIFDEVQTGLGRTGKLFAYEHYGSEVEPDIITLAKGLGGGVP-IGAVLAKEEVAEA---L---  277 (402)
T ss_pred             HHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCH-HHHHEEHHHHHHH---C---
T ss_conf             78999999998648918999447528774332233120688455238754055527820-2232023678731---5---


Q ss_pred             CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCC
Q ss_conf             778312320011232103347864466644889999999986201031899999999779999999874797167-6688
Q gi|254780153|r  221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVD  299 (391)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~  299 (391)
                                      .-...|+|+.==|. +..|...+|+.|++++=+++..++    .+.+.+.|+...--.. ++  
T Consensus       278 ----------------~~G~HGsTFGGNPL-Ac~Aa~~vl~~i~~~~~l~~v~~~----G~~f~~~L~~~~~~~~~l~--  334 (402)
T TIGR00707       278 ----------------TPGDHGSTFGGNPL-ACAAALAVLEVIEKERLLEKVKEK----GDYFKERLEELIKKYIDLI--  334 (402)
T ss_pred             ----------------CCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHHCCCCCCCE--
T ss_conf             ----------------89898666787389-999987766655051047899998----8999999998617766740--


Q ss_pred             CCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             2003653178-982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r  300 ETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       300 ~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      ++.|....+. +.+..+.          ...+++++.+.+.|..+-..+    ++.+|.--==.|+++.|+..+++|+.+
T Consensus       335 k~VRG~GLmlG~e~~~~~----------~~a~~~~~~a~~~GlLv~~Ag----~~v~Rf~PPL~i~~e~i~~~~~~l~~~  400 (402)
T TIGR00707       335 KEVRGKGLMLGIELEAPS----------VAAKDIVKEAREKGLLVNTAG----PKVLRFVPPLIITEEEIDEAVDALEEA  400 (402)
T ss_pred             EEEECCEEEEEEEECCCC----------CCHHHHHHHHHHCCCEEECCC----CCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             153231234655642786----------558999999984892688178----870661578644588999999999998


Q ss_pred             H
Q ss_conf             9
Q gi|254780153|r  379 F  379 (391)
Q Consensus       379 ~  379 (391)
                      +
T Consensus       401 ~  401 (402)
T TIGR00707       401 I  401 (402)
T ss_pred             H
T ss_conf             2


No 297
>pfam00202 Aminotran_3 Aminotransferase class-III.
Probab=98.19  E-value=0.00014  Score=48.44  Aligned_cols=235  Identities=12%  Similarity=0.065  Sum_probs=122.4

Q ss_pred             CHHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCC-CE
Q ss_conf             96899998632103653--289889999999999999996889985799974873489998753205-------789-70
Q gi|254780153|r   24 RPGWSLGILEGALLGRS--HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYR-GV   93 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~s--HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~-~~   93 (391)
                      +|+ |.+++.+++-..+  ++..-..+...+.-+.|.+++..  ++..+++.-|||.|+|+++.--.       .++ ..
T Consensus        34 ~p~-i~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~l~~~~p~--~~~~v~f~~sGseA~e~AiklAr~~~~~~g~t~r~~  110 (338)
T pfam00202        34 HPK-IVQAVKEQADKLTHTSFRAFTTEPALQLAEKLAQLTPG--GLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTK  110 (338)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             599-99999999953898566755888999999999985788--868799828768999999999999777537899887


Q ss_pred             EEEEECCHHHHHHHHHHHCCCC---------CEEEEECCCCCCCCHHH-------------CCCCCCEEEEEEECCCC--
Q ss_conf             7997073688888765323876---------30674057776578676-------------78556579974202420--
Q gi|254780153|r   94 DVLAWESFGLGWMSDIRQLSLQ---------DVREFTAPYGSLPDFSK-------------VDFDRDVVFVWNGTTSG--  149 (391)
Q Consensus        94 ~~~~~g~~~~r~~~~~~~~~~~---------~~~~~~~~~g~~~~~~~-------------~~~~~~v~~~h~ETstG--  149 (391)
                      ++...|+|=++-..-..--+..         .......|+........             ....+.++.+-.|...|  
T Consensus       111 il~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaaviiEPi~g~~  190 (338)
T pfam00202       111 IIAFSGGFHGRTLGALSVTGSSGYKKGFGPSLPGVYFLPYPDLEAAEEELACADEALRLIKAVHDDNIAAVIVEPIQGEG  190 (338)
T ss_pred             EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf             99993882588730588158855555677899994574899735420015668999999998589977999998877889


Q ss_pred             -EEECC------EEEECCCCCCEEEEEECCH-HHHC--CC--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHH
Q ss_conf             -22032------0350256861488640110-1102--54--55685--7999700120017665154456778887654
Q gi|254780153|r  150 -VCVPD------VGFIPESREGLVICDATSA-VFAR--HI--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLE  215 (391)
Q Consensus       150 -v~~~~------~~~~~~~~~~llivD~vSs-~g~~--p~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~  215 (391)
                       +..+.      ...+|+++++++|+|=|.+ ||-.  -+  +.+++  |++..|  |+|++===++.++.+++..+...
T Consensus       191 G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~gv~PDiv~~g--K~l~~G~P~sav~~~~~i~~~~~  268 (338)
T pfam00202       191 GVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLFACEHYGVTPDIMTLA--KALTGGLPLSAVLATAEIMQAFH  268 (338)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCHHHHCCCCCEEEEEC--CCCCCCCCCCCCCCCHHHHHHCC
T ss_conf             9767987999999999743277576453100877534874023249887599956--42458998753116477997177


Q ss_pred             HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r  216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN  290 (391)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~  290 (391)
                                            ....++|++.-|+ ...+..++|+.+++++    ..++.+++.+.+.+.++++
T Consensus       269 ----------------------~~~~~~T~~g~p~-~~aaa~a~L~~l~~~~----l~~~~~~~g~~l~~~L~~l  316 (338)
T pfam00202       269 ----------------------PGSHGGTFGGNPL-ACAAALAVLDIIEDEN----LLQNAQEKGDYLRKGLLAL  316 (338)
T ss_pred             ----------------------CCCCCCCCCHHHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHH
T ss_conf             ----------------------9995877766499-9999999999996558----9999999999999999985


No 298
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.17  E-value=0.00067  Score=44.20  Aligned_cols=306  Identities=16%  Similarity=0.086  Sum_probs=153.1

Q ss_pred             CCCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf             8886888776-8968999986321036532898--89999999999999996889-98579997487348999875320-
Q gi|254780153|r   13 RPFFSSGPCA-KRPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALWSL-   87 (391)
Q Consensus        13 ~~~F~pGP~~-~~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~nl-   87 (391)
                      =.+|+-|=-. -.|..|++++.... +.+|=++  -..++-+.+.+.+++-++.. .+-+-++++.|++.++..+...+ 
T Consensus        29 vI~l~iG~Pd~p~P~~v~~a~~~a~-~~~~Y~~~~G~~~LReAIa~~~~~~~g~~~~~~~~V~vt~Ga~~~l~~l~~~l~  107 (364)
T PRK07865         29 IVDLSVGTPVDPVPPVIQEALAAAA-DAPGYPTTAGTPELREAIVAWLARRYGVTGLDPAAVLPVIGSKELVAWLPTLLG  107 (364)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHC
T ss_conf             3985698998998999999999624-899989988879999999999999839898996879976988999999999970


Q ss_pred             CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-CC-EEEEEEECCCCEEECCEEE-----ECC
Q ss_conf             5789707997073688888765323876306740577765786767855-65-7997420242022032035-----025
Q gi|254780153|r   88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-RD-VVFVWNGTTSGVCVPDVGF-----IPE  160 (391)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~-v~~~h~ETstGv~~~~~~~-----~~~  160 (391)
                      +++||.+++-+=.|-..  ....+..+..+...       ..+.++... .. +.++.=..-||...+..+.     +|.
T Consensus       108 ~~pGD~Vlip~P~Yp~y--~~~~~~~g~~~v~~-------d~~~~~~~~~~~li~lnsP~NPTG~v~s~e~l~~l~~la~  178 (364)
T PRK07865        108 LGPGDVVVVPELAYPTY--EVGARLAGATVVRA-------DSLTELGPQTPALIWLNSPSNPTGRVLGVDHLRKVVAWAR  178 (364)
T ss_pred             CCCCCEEEECCCCCCHH--HHHHHHCCCEEEEC-------CCHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             79999899866786019--99999819865610-------7887759877529998999698551176999999999977


Q ss_pred             CCCCEEEEEECCHHH---HCCCC--------CCCCE-EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             686148864011011---02545--------56857-9997001200176651--5445677888765411445778312
Q gi|254780153|r  161 SREGLVICDATSAVF---ARHID--------FNKLD-VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       161 ~~~~llivD~vSs~g---~~p~d--------~~~iD-v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
                      .++.++|.|-+=+-.   +.+..        .+.-. +++.|.-|.++. ||+  |.++..++.+++....+.       
T Consensus       179 ~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~-~GlRiG~i~~~~~li~~l~~~~~-------  250 (364)
T PRK07865        179 ERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNL-AGYRAGFVAGDPALVAELLAVRK-------  250 (364)
T ss_pred             HCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCC-CCCEEEEEECCHHHHHHHHHHHH-------
T ss_conf             6718998254257642589886513864427775757999436523067-77448999679999999999998-------


Q ss_pred             HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT  306 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~  306 (391)
                                     .....+| ...-++...+|+.   ..-+....++++++...+.+.++..+ +...  .++    .
T Consensus       251 ---------------~~~~~~~-~~~Q~a~~aal~~---~~~~~~~~~~y~~rr~~l~~~L~~~g-~~~~--~p~----G  304 (364)
T PRK07865        251 ---------------HAGMMVP-APVQAAMVAALGD---DAHVREQRERYARRRAVLLPALEAAG-FTVD--HSE----A  304 (364)
T ss_pred             ---------------HCCCCCC-HHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC--CCC----C
T ss_conf             ---------------5502378-9999999999579---39999999999999999999998679-7662--699----2


Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHH
Q ss_conf             17898247310113734567888999998886282872665-5676750-568615888999999999999
Q gi|254780153|r  307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      ...+-+..+.    +       ..+....|.+.|+++--|. +...|.+ +|++..  .++++++.-++-|
T Consensus       305 ~fylw~~~~~----~-------~~~~~~~l~e~gV~v~PG~~Fg~~g~~~vRls~~--~~~e~l~ea~~RL  362 (364)
T PRK07865        305 GLYLWATRGE----D-------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERL  362 (364)
T ss_pred             EEEEEEECCC----C-------HHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEC--CCHHHHHHHHHHH
T ss_conf             2799888899----9-------9999999997998991887436899986999965--9899999999986


No 299
>KOG3846 consensus
Probab=98.12  E-value=0.00079  Score=43.75  Aligned_cols=329  Identities=16%  Similarity=0.080  Sum_probs=191.1

Q ss_pred             CCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC---EEEEEECCHHHHHHHH--HHHC
Q ss_conf             3289--8899999999999999968899857999748734899987532057897---0799707368888876--5323
Q gi|254780153|r   40 SHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG---VDVLAWESFGLGWMSD--IRQL  112 (391)
Q Consensus        40 sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~---~~~~~~g~~~~r~~~~--~~~~  112 (391)
                      +|-+  -+...+=+-+...++.+-++.++ +|.++. |=|.-....+.++.+|..   +.++..+.|-..-...  ..+.
T Consensus       101 gH~~GkvPW~~~De~il~l~~~iVGA~e~-EvavmN-sLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~l  178 (465)
T KOG3846         101 GHFKGKVPWVSIDEPILPLLAPIVGAQEN-EVAVMN-SLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKL  178 (465)
T ss_pred             CCCCCCCCEEECCHHHHHHHHHHCCCCCH-HHHHHH-HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             01146666145562465543443067701-444575-5666899999885078604633100047788417888756523


Q ss_pred             CCCCE----EEEECCCCCCCC-----HHHCCCCCC----EEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHC
Q ss_conf             87630----674057776578-----676785565----7997420242022032035--02568614886401101102
Q gi|254780153|r  113 SLQDV----REFTAPYGSLPD-----FSKVDFDRD----VVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFAR  177 (391)
Q Consensus       113 ~~~~~----~~~~~~~g~~~~-----~~~~~~~~~----v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~  177 (391)
                      ++..+    ..++...|+..-     ++-++...+    |++...---||-.+++-++  ..+..++++=.|-.-++|..
T Consensus       179 hG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNV  258 (465)
T KOG3846         179 HGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNV  258 (465)
T ss_pred             CCCCHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCCHHHHHHCCCCCCCEECHHHHHHHCCC
T ss_conf             57875782377345666310107879999973687699999505244225322414433213578847622256453577


Q ss_pred             CC--CCCCCEEEEECCHHCCC-CCCCCEEEEECHHHHHHHHHCCCCCCC---CCHHHCCHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             54--55685799970012001-766515445677888765411445778---3123200112321033478644666448
Q gi|254780153|r  178 HI--DFNKLDVVTFSAQKVLG-GEAGFGIIILSPASVERLEKYVPSWPL---PKIFRMVKGGRVMEGLFCGETINTPSLL  251 (391)
Q Consensus       178 p~--d~~~iDv~~a~sQK~l~-~ppGl~~v~~s~~al~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~TP~v~  251 (391)
                      |+  .+|++|...-+|-|-+. |+.|++-+.+-++-.......-..|+.   ..-|.+..-.+.... .-|.-...||+.
T Consensus       259 pL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipG-a~GfRiSNPpi~  337 (465)
T KOG3846         259 PLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPG-ALGFRISNPPII  337 (465)
T ss_pred             CEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEHHHHCCHHHHHHHHCCCCCCHHHHHCCCCCCCCC-CCCCCCCCCCHH
T ss_conf             5277615776477742011356887522256425432102167750214780034300120355764-112113798473


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEEEECCCC---CCCCCHHHHHH
Q ss_conf             8999999998620103189999999977999999987479716-7668820036531789824731---01137345678
Q gi|254780153|r  252 CIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE-NLAVDETTRSNTSICMKIVDSD---IASLDINSQKS  327 (391)
Q Consensus       252 ~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~-~~~~~~~~rS~~~v~~~~~d~~---~~~~~~~~~~~  327 (391)
                      .+.+++.+|+.+. +..+++..+|.--....+...++.+.+.. +...++     ..+++..|...   .+-+.... ..
T Consensus       338 ~v~al~~SLe~F~-q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~K-----l~~~IiTP~~~~erGcQLsl~F-ss  410 (465)
T KOG3846         338 DVVALRSSLELFA-QFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEK-----LFFTIITPTSTDERGCQLSLYF-SS  410 (465)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC-----EEEEEECCCCCCCCCCEEEEEE-CC
T ss_conf             7998876699998-853998865344677689999987416676002216-----1599847864144564699996-79


Q ss_pred             HHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf             8899999888628287266556767505686158-889999999999999999999
Q gi|254780153|r  328 FCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGV-TVEKEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       328 ~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g-~i~~~dv~~L~~aLe~~~~~~  382 (391)
                      -...+.+.|.+.|++.+ +.   .+++||+.--+ +.+-.||-..+++|..+...+
T Consensus       411 p~~~vfqeL~krGv~~D-kR---~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~  462 (465)
T KOG3846         411 PTPKVFQELHKRGVIGD-KR---RPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL  462 (465)
T ss_pred             CCHHHHHHHHHCCEECC-CC---CCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             95188999987370132-55---888328614200001899999999999999875


No 300
>pfam03841 SelA L-seryl-tRNA selenium transferase.
Probab=98.07  E-value=0.0007  Score=44.08  Aligned_cols=187  Identities=19%  Similarity=0.202  Sum_probs=105.4

Q ss_pred             CCCCCCHHHHHHHHHHHCCC---------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             87768968999986321036---------532898899999999999999968899857999748734899987532057
Q gi|254780153|r   19 GPCAKRPGWSLGILEGALLG---------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG   89 (391)
Q Consensus        19 GP~~~~p~~v~~~~~~~~l~---------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~   89 (391)
                      |=++++|+ +.+++....-+         ..-|+.    -+..+.+.|+++.+..+   .++... ...++--++..|. 
T Consensus        14 GRa~l~~~-a~~a~~~~~~~y~nLE~dl~~g~RG~----R~~~~~~ll~~ltgaE~---a~vVNn-nAaAv~L~l~~la-   83 (367)
T pfam03841        14 GRALLSEE-AVEAAKEAARHYSNLEYDLESGKRGS----RDSHLEELLCELTGAED---ALVVNN-NAAAVLLVLNTLA-   83 (367)
T ss_pred             CCCCCCHH-HHHHHHHHHCCCCHHHHHHHHCCCCC----HHHHHHHHHHHHHCCCE---EEEECC-CHHHHHHHHHHHH-
T ss_conf             77789999-99999998617720366674177663----57899999998639865---999878-3899999999875-


Q ss_pred             CCCEEEEEECC---H--HHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHH-CCCCC-CEEEEE--EECCCCE----EECCE
Q ss_conf             89707997073---6--88888765323876306740-57776578676-78556-579974--2024202----20320
Q gi|254780153|r   90 YRGVDVLAWES---F--GLGWMSDIRQLSLQDVREFT-APYGSLPDFSK-VDFDR-DVVFVW--NGTTSGV----CVPDV  155 (391)
Q Consensus        90 ~~~~~~~~~g~---~--~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~-~~~~~-~v~~~h--~ETstGv----~~~~~  155 (391)
                      .+..+++.-|.   .  +-|.-+.+.+ .+.....+. ..-+...|.+. +...+ .+..||  |=...|.    ...+.
T Consensus        84 ~g~evivSRGelVeiGgsfRiPdim~~-sGa~LvEVGtTNrT~l~DYe~AI~e~Ta~llkVH~SN~~i~GFt~~v~~~el  162 (367)
T pfam03841        84 QGKEVIISRGELVEIGGSFRIPDIMKQ-SGARLVEVGTTNRTHLKDYEQAINENTALLMKVHTSNYRIQGFTKEVSLAEL  162 (367)
T ss_pred             CCCCEEEECCEEECCCCCCCCHHHHHH-CCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCHHHH
T ss_conf             489057755545123875440899996-5978998256688898999987082461899994265122374677999999


Q ss_pred             EEECCCCCCEEEEEECCHHH---------HCCC--C--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC
Q ss_conf             35025686148864011011---------0254--5--5685799970012001766515445677888765411
Q gi|254780153|r  156 GFIPESREGLVICDATSAVF---------ARHI--D--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY  217 (391)
Q Consensus       156 ~~~~~~~~~llivD~vSs~g---------~~p~--d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~  217 (391)
                      ..+++.++.++++|.=|...         .+|-  +  ..+.|++.+|.-|-|||| .-|+++-++++++++.+.
T Consensus       163 ~~la~~~~ip~i~DlGSG~l~d~~~~gl~~Ep~v~~~l~~GaDlV~FSGDKLLGGP-QAGII~Gkk~lI~~ikkn  236 (367)
T pfam03841       163 VALGKEHGLPVYYDLGSGSLVDLSQYGLPKEPTVQELLALGVDLVSFSGDKLLGGP-QAGIIVGKKELIERLKKN  236 (367)
T ss_pred             HHHHHHCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC-CCCEEEECHHHHHHHHHC
T ss_conf             99998769967997586631122001799999899999739988998676456898-532476459999974647


No 301
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.06  E-value=0.00055  Score=44.74  Aligned_cols=214  Identities=21%  Similarity=0.241  Sum_probs=120.5

Q ss_pred             CCCCCHHHHHHHHHHHC-----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
Q ss_conf             77689689999863210-----3653289889999999999999996889985799974873489998753205789707
Q gi|254780153|r   20 PCAKRPGWSLGILEGAL-----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVD   94 (391)
Q Consensus        20 P~~~~p~~v~~~~~~~~-----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~   94 (391)
                      =+-+.|+ .++++...+     |+.+--+..+.+-...+.   ..++++.....++++ +.-+.+...++..+..+++++
T Consensus        36 ~s~~~~e-~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~---~~~~~~~~aea~~iv-nnn~aAVll~~~al~~~~EvV  110 (395)
T COG1921          36 RSLYSPE-AIEAMKEAMRAPVELETDLKTGKRGARLTELA---ELLCGLTGAEAAAIV-NNNAAAVLLTLNALAEGKEVV  110 (395)
T ss_pred             CCCCCHH-HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH---HHHHCCCCHHHEEEE-CCCHHHHHHHHHHHCCCCEEE
T ss_conf             7667989-99999998505430356401231357779999---998366440332567-882899999876320577179


Q ss_pred             E----EEE-CCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHH-HCCCC-CCEEEEEEEC--CCCEEECC--EEEECCCC
Q ss_conf             9----970-7368888876532387630674-05777657867-67855-6579974202--42022032--03502568
Q gi|254780153|r   95 V----LAW-ESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFS-KVDFD-RDVVFVWNGT--TSGVCVPD--VGFIPESR  162 (391)
Q Consensus        95 ~----~~~-g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~-~~~~~-~~v~~~h~ET--stGv~~~~--~~~~~~~~  162 (391)
                      +    .+. |+|  + ..++.+..+...... +.......+.+ .+... +....||++.  -+|. .+.  ...++|.+
T Consensus       111 is~g~lV~gg~~--~-v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV~s~~~~f~~~-l~~~~l~~ia~~~  186 (395)
T COG1921         111 VSRGELVEGGAF--R-VPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTALLLKVHSSNYGFTGM-LSEEELVEIAHEK  186 (395)
T ss_pred             EECCCCCCCCCC--C-HHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCC-CCHHHHHHHHHHC
T ss_conf             971311568899--8-66799971977998156576778889988545870589995036661464-5599999999876


Q ss_pred             CCEEEEEECCHHHHC------CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf             614886401101102------54556857999700120017665154456778887654114457783123200112321
Q gi|254780153|r  163 EGLVICDATSAVFAR------HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       163 ~~llivD~vSs~g~~------p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~  236 (391)
                      +.++++|.-|.....      ++-..+.|++.+|.-|-|+||- -|+++-+++.+++.+...-.    +-+.-       
T Consensus       187 ~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~lq~~~l~----Ralrv-------  254 (395)
T COG1921         187 GLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEKLQSHPLK----RALRV-------  254 (395)
T ss_pred             CCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEECCHHCCCCC-CCEEECHHHHHHHHHHHHHH----HHHHC-------
T ss_conf             9977996677630035544568886079789975401127985-43374249999999762133----43315-------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             033478644666448899999999862010
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDALLWLKKM  266 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~  266 (391)
                                -++  .+.++..+|+.++..
T Consensus       255 ----------~K~--tla~l~~aLe~y~~~  272 (395)
T COG1921         255 ----------DKE--TLAALEAALELYLQP  272 (395)
T ss_pred             ----------CCH--HHHHHHHHHHHHCCC
T ss_conf             ----------827--689999999987080


No 302
>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237   This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=98.06  E-value=3.1e-05  Score=52.69  Aligned_cols=209  Identities=23%  Similarity=0.273  Sum_probs=134.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~  120 (391)
                      |.+-.++++      +++..+. .-|..+-+|||-+|+.|+++++++-||.++..++-||=-  +.++.....++++..+
T Consensus        57 gNPTv~~LE------~riA~LE-g~EAavAt~SGMgAi~A~l~~~lkAgDh~i~d~~lYGCTfall~~~ltkfgi~v~f~  129 (392)
T TIGR01328        57 GNPTVDLLE------RRIAELE-GAEAAVATASGMGAIAATLLSLLKAGDHVISDETLYGCTFALLEDALTKFGIDVKFV  129 (392)
T ss_pred             CCCHHHHHH------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEE
T ss_conf             771377888------8987542-046778875128999999999985287577438742014899873267737527983


Q ss_pred             ECCCCCCCCHHHC--CCCCCEEEEEEECCCCEEECCEEE--------ECCCCC-CEEEEEECCH--HHHCCCCCCCCEEE
Q ss_conf             0577765786767--855657997420242022032035--------025686-1488640110--11025455685799
Q gi|254780153|r  121 TAPYGSLPDFSKV--DFDRDVVFVWNGTTSGVCVPDVGF--------IPESRE-GLVICDATSA--VFARHIDFNKLDVV  187 (391)
Q Consensus       121 ~~~~g~~~~~~~~--~~~~~v~~~h~ETstGv~~~~~~~--------~~~~~~-~llivD~vSs--~g~~p~d~~~iDv~  187 (391)
                      .-.     .++++  ...+.-.+++.||-   .||...+        ++|..+ +++|||=+=+  ....|++. ++|++
T Consensus       130 ~~~-----~pee~~a~i~dnT~ivYfETP---aNPtm~liD~e~v~r~A~~~gG~kVivDNTfatP~lt~P~al-G~D~V  200 (392)
T TIGR01328       130 DMA-----SPEEVKAAIKDNTKIVYFETP---ANPTMKLIDLELVVRVAHEKGGVKVIVDNTFATPYLTRPVAL-GVDVV  200 (392)
T ss_pred             CCC-----CHHHHHHHCCCCCEEEEEECC---CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCHHHC-CCCEE
T ss_conf             178-----779999844899779998659---987525775999999997529828998566277001380361-87768


Q ss_pred             EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             97001200176651--5445677888765411445778312320011232103347864466644889999999986201
Q gi|254780153|r  188 TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKK  265 (391)
Q Consensus       188 ~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~  265 (391)
                      +=|+=|=|+|-.=+  |+++-..+.++++.....+       |+           .|+      |-.=+..=+.|+-++ 
T Consensus       201 VHSATKYigGHgDvVaG~~~G~~e~~q~iR~~g~K-------D~-----------tG~------ViSPfdAwL~lRGLk-  255 (392)
T TIGR01328       201 VHSATKYIGGHGDVVAGVLIGDAELLQRIRLVGVK-------DM-----------TGA------VISPFDAWLVLRGLK-  255 (392)
T ss_pred             EECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCC-------CC-----------CCC------EECHHHHHHHHHHHH-
T ss_conf             94241213761221122110775667440111100-------05-----------665------005578999974366-


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             03189999999977999999987479716
Q gi|254780153|r  266 MGGLSACVERCNANAAVLFQFIQENDWIE  294 (391)
Q Consensus       266 ~gGl~~~~~r~~~~a~~l~~~i~~~~~~~  294 (391)
                        .|.-|-+||-++|+.+-+||+.++-.+
T Consensus       256 --TL~~RM~rhsenA~kvAe~Lk~HPaVe  282 (392)
T TIGR01328       256 --TLAVRMKRHSENAEKVAEYLKEHPAVE  282 (392)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             --777888773053899999852388602


No 303
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.03  E-value=0.0013  Score=42.42  Aligned_cols=307  Identities=17%  Similarity=0.069  Sum_probs=154.7

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             9999999999999996889985799974873489998753205-78--97079970736888887653238763067405
Q gi|254780153|r   46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTA  122 (391)
Q Consensus        46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~  122 (391)
                      ..+.+=+-+..+.+|.+.+=.. .-++. +||.+=||+.+..- .+  .++.++.-..+-+...-.-.+..+....+...
T Consensus       118 rLqaLfefQtlv~dLTGm~VAN-ASm~D-eaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~  195 (450)
T COG0403         118 RLEALFEFQTLVADLTGLDVAN-ASMLD-EATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV  195 (450)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCC-CHHHH-HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEE
T ss_conf             9999998999999985887445-00231-676999999999874147673499668868779999986112576399995


Q ss_pred             CCCCCCCHHHCCCCCC--EEEEEEECCCCEEEC-CEEE--ECCCCCCEEEE--EECCHHHHCCCCCCCCEEEEECCHHCC
Q ss_conf             7776578676785565--799742024202203-2035--02568614886--401101102545568579997001200
Q gi|254780153|r  123 PYGSLPDFSKVDFDRD--VVFVWNGTTSGVCVP-DVGF--IPESREGLVIC--DATSAVFARHIDFNKLDVVTFSAQKVL  195 (391)
Q Consensus       123 ~~g~~~~~~~~~~~~~--v~~~h~ETstGv~~~-~~~~--~~~~~~~lliv--D~vSs~g~~p~d~~~iDv~~a~sQK~l  195 (391)
                      ++....+++.. ...+  .+++..=+..|+..+ ...+  .+|.++++++|  |-+|--.-.|=-.++.|+++.++|- |
T Consensus       196 ~~~d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~Qr-f  273 (450)
T COG0403         196 DADDLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQR-F  273 (450)
T ss_pred             CCCHHHHHHHC-CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCCCCEEEECCCC-C
T ss_conf             64225566532-467737999976888773414099999998635977999826367645578410378669733760-4


Q ss_pred             CCCC-----CCEEEEECHHHHHHHHHCC-----CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHH
Q ss_conf             1766-----5154456778887654114-----45778312320011232103347864466644889999999--9862
Q gi|254780153|r  196 GGEA-----GFGIIILSPASVERLEKYV-----PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDA--LLWL  263 (391)
Q Consensus       196 ~~pp-----Gl~~v~~s~~al~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~--l~~i  263 (391)
                      |.|-     ..++..++++...++-..-     ..... +-+.+........=++..-|-|-=.-..+.++..+  +-|.
T Consensus       274 GvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~-~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~h  352 (450)
T COG0403         274 GVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGK-RAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYH  352 (450)
T ss_pred             CCCCCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             77767887563222375867425998433046458998-03201287788887640010155489999999999999986


Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
Q ss_conf             0103189999999977999999987479-716766882003653178982473101137345678889999988862828
Q gi|254780153|r  264 KKMGGLSACVERCNANAAVLFQFIQEND-WIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIA  342 (391)
Q Consensus       264 ~~~gGl~~~~~r~~~~a~~l~~~i~~~~-~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~  342 (391)
                      =. .|+..+..|..+++..+.+++++.. ++..+ .+   ..--.++++++. .       ..    ..    +.+++++
T Consensus       353 Gp-~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~-~~---~fFdt~~v~~~~-~-------~~----~~----l~~~~~~  411 (450)
T COG0403         353 GP-QGLKEIAERIHRLAAYLAAGLKEIGAGVELV-FD---HFFDTFTVRVPE-E-------VA----EA----LLAAAIA  411 (450)
T ss_pred             CH-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CC---CCEEEEEEECCH-H-------HH----HH----HHHHHHH
T ss_conf             96-8899999999999999999876458864751-42---422048886463-6-------79----99----9999985


Q ss_pred             ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             726655676750568615888999999999999999
Q gi|254780153|r  343 YDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       343 ~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      -+++-.+.-....=|+.=-..+.+||++|++++...
T Consensus       412 ~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~  447 (450)
T COG0403         412 GGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             CCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             497414544881599951256789999999997533


No 304
>PRK05839 hypothetical protein; Provisional
Probab=98.00  E-value=0.0014  Score=42.07  Aligned_cols=307  Identities=10%  Similarity=0.002  Sum_probs=145.9

Q ss_pred             CCCCCCC-CCCCHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCC-
Q ss_conf             8868887-7689689999863210365328--988999999999999999688998-5799974873489998753205-
Q gi|254780153|r   14 PFFSSGP-CAKRPGWSLGILEGALLGRSHR--CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLL-   88 (391)
Q Consensus        14 ~~F~pGP-~~~~p~~v~~~~~~~~l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~-   88 (391)
                      .+|+-|= .--.|..+++++....-+.+|=  +.=..++-+.+.+-+++-++..=+ -+|++ +.|++.++-.++.-++ 
T Consensus        27 i~L~iG~pdf~~P~~i~~A~~~~~~~~~~Y~~~~G~peLR~Aia~~~~~~~g~~v~~~~I~v-t~Ga~~al~~~~~~~l~  105 (376)
T PRK05839         27 LDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEEELREAQRGFFKRRFNIELKENELIP-TFGTREVLFNFPQFVLF  105 (376)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE-CCCHHHHHHHHHHHHHC
T ss_conf             87968899999899999999986444897799878299999999999998689998024998-17889999999999845


Q ss_pred             -CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHH--HCCCCCCEEEEEEECCCCEEECCEE-----EE
Q ss_conf             -78970799707368888876532387630674--05777657867--6785565799742024202203203-----50
Q gi|254780153|r   89 -GYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFS--KVDFDRDVVFVWNGTTSGVCVPDVG-----FI  158 (391)
Q Consensus        89 -~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~--~~~~~~~v~~~h~ETstGv~~~~~~-----~~  158 (391)
                       .+++.+++-+=.|-..  ..+.+..+..+..+  ..+.+..++++  ..+..+.+.++.=..-||...+..+     .+
T Consensus       106 ~~~~~~i~~p~P~y~~y--~~~~~~~g~~~v~v~l~~e~~~~~~l~~~~~~~tk~iilnsP~NPTG~v~s~eel~~i~~l  183 (376)
T PRK05839        106 DKQNPTIAYPNPFYQIY--EGAAIASRAKSLYMNLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKL  183 (376)
T ss_pred             CCCCCEEEECCCCCHHH--HHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf             79998899789876325--8999861686324246402588864118765058999988998998823639999999875


Q ss_pred             CCCCCCEEEEEECCH-H-HHCCC----C------CCCC-E-EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCC
Q ss_conf             256861488640110-1-10254----5------5685-7-9997001200176651--544567788876541144577
Q gi|254780153|r  159 PESREGLVICDATSA-V-FARHI----D------FNKL-D-VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWP  222 (391)
Q Consensus       159 ~~~~~~llivD~vSs-~-g~~p~----d------~~~i-D-v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~  222 (391)
                      |.+++..+|.|-+=+ + ...+.    +      .... . +++.|.-|.++ -||+  |.++..++.+++......   
T Consensus       184 a~~~~~~iisDEiY~~l~~~~~~~s~~~~~~~~~~~~~~~vi~i~s~SK~~~-~~G~RiG~i~~~~~~i~~~~~~~~---  259 (376)
T PRK05839        184 ALKYDFILINDECYSEIYENTPPPSLLEASILAGNESFKNVLVINSISKRSS-APGLRSGFIAGDSSILKKYKAYRT---  259 (376)
T ss_pred             HCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHHCC-CCCCCEEEEECCHHHHHHHHHHHH---
T ss_conf             1473699998068288637999876888656514553253799923203201-465406999789999999998656---


Q ss_pred             CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r  223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT  302 (391)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~  302 (391)
                                          .+-.+.|+..-.+...++.   .+.-++.+.++++++.+.+.+.+.      ...  |+ 
T Consensus       260 --------------------~~~~~~~~~~q~aa~~a~~---~~~~~~~~r~~~~~~~~~~~~~l~------~~~--P~-  307 (376)
T PRK05839        260 --------------------YLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREILG------ITI--PP-  307 (376)
T ss_pred             --------------------HCCCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHCC------CCC--CC-
T ss_conf             --------------------4367851999999999972---966899999999999999987539------888--98-


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC--CC-CCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             36531789824731011373456788899999-8886282872665--56-76750-5686158889999999999999
Q gi|254780153|r  303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS--YR-DAPLG-LRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~--~r-~~~~~-~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                       +..-+-+.++          ...    ++.. ++.++|+++--|.  +. ..|++ +|++..  .+.+.++.-++-|+
T Consensus       308 -g~fy~~~~~~----------d~~----~f~~~Ll~~~gV~v~PG~~FG~~~~g~~~vRls~~--~~~e~L~eal~Rl~  369 (376)
T PRK05839        308 -YTFYVWLPVQ----------NDE----NFTKKLYQNEGIKVLPGSYLGRNGIGKDYVRLALV--YDTPKLKKALERIK  369 (376)
T ss_pred             -EEEEEEEECC----------CHH----HHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEE--CCHHHHHHHHHHHH
T ss_conf             -0379986689----------989----99999998099999774001799998996999970--88999999999999


No 305
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=97.94  E-value=0.00076  Score=43.83  Aligned_cols=260  Identities=14%  Similarity=0.098  Sum_probs=151.0

Q ss_pred             EEECCCCHHHHHHHHHHCCC--CCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHC----C--CCCCE
Q ss_conf             99748734899987532057--8970799707368888876532387630674--0577765786767----8--55657
Q gi|254780153|r   70 AIVPASDTGAVEMALWSLLG--YRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKV----D--FDRDV  139 (391)
Q Consensus        70 ~~l~GsgT~~~ea~~~nl~~--~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~----~--~~~~v  139 (391)
                      -+-+=|||||.-.+.-.+-.  +...+.+.+=.|.+-. ......|. .+..+  ....+...+++..    .  ...++
T Consensus        97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~-~If~~aGl-~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~v  174 (396)
T COG1448          97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHK-AIFEAAGL-EVETYPYYDAETKGLDFDGMLADLKTAPEGSV  174 (396)
T ss_pred             HEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHH-HHHHHCCC-CEEEEECCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf             30067761289999999998488862884799827589-99996698-14531035466664257999999973789988


Q ss_pred             EEEE--EECCCCEEECCEEE-----ECCCCCCEEEEEEC-CHHHH-CCCCCCC--------CEE-EEECCHHCCCC----
Q ss_conf             9974--20242022032035-----02568614886401-10110-2545568--------579-99700120017----
Q gi|254780153|r  140 VFVW--NGTTSGVCVPDVGF-----IPESREGLVICDAT-SAVFA-RHIDFNK--------LDV-VTFSAQKVLGG----  197 (391)
Q Consensus       140 ~~~h--~ETstGv~~~~~~~-----~~~~~~~llivD~v-Ss~g~-~p~d~~~--------iDv-~~a~sQK~l~~----  197 (391)
                      .+.|  |-.-||+.....++     +-.+++.+-++|.. ..|+. .+-|.++        .-+ +..|.-|||+.    
T Consensus       175 vLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgER  254 (396)
T COG1448         175 VLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGER  254 (396)
T ss_pred             EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHC
T ss_conf             99836778988999999999999999997698236632444421246778999999997298589971000124434300


Q ss_pred             CCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHCCCCHH
Q ss_conf             665154456778887654114457783123200112321033478644666448899999999-------8620103189
Q gi|254780153|r  198 EAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-------LWLKKMGGLS  270 (391)
Q Consensus       198 ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-------~~i~~~gGl~  270 (391)
                      ..++++|.=+.....+...            ..+..       -..++..||.++.......|       +|.. |  ++
T Consensus       255 VGa~~vva~~~~~a~~v~s------------qlk~~-------iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~-E--l~  312 (396)
T COG1448         255 VGALSVVAEDAEEADRVLS------------QLKAI-------IRTNYSNPPAHGAAVVATILNNPELRAEWEQ-E--LE  312 (396)
T ss_pred             CCEEEEEECCHHHHHHHHH------------HHHHH-------HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH-H--HH
T ss_conf             2315888278899999999------------99999-------9863589841239999999489999999999-9--99


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf             99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r  271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD  350 (391)
Q Consensus       271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~  350 (391)
                      .|..|..++++.+.+.+.+.+--..|..-...++.    |.+..             ...+-+.+|.+|-++|-++.   
T Consensus       313 ~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GM----Fsy~G-------------ls~~QV~rLree~~IY~v~s---  372 (396)
T COG1448         313 EMRQRILEMRQALVDALKALGAPRNFDFIISQRGM----FSYTG-------------LSPEQVDRLREEFGIYLVAS---  372 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCE----EECCC-------------CCHHHHHHHHHHCCEEEECC---
T ss_conf             99999999999999999862788662247546752----44589-------------99999999998566799537---


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             6750568615888999999999999999
Q gi|254780153|r  351 APLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       351 ~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                          =||++=| ++..+|+.|.++|..+
T Consensus       373 ----GRi~vaG-l~~~ni~~va~ai~~v  395 (396)
T COG1448         373 ----GRINVAG-LNTSNIDYVAKAIAAV  395 (396)
T ss_pred             ----CEEEECC-CCHHHHHHHHHHHHHH
T ss_conf             ----8146536-8744089999999864


No 306
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=97.84  E-value=0.0027  Score=40.33  Aligned_cols=308  Identities=18%  Similarity=0.177  Sum_probs=162.2

Q ss_pred             CHHHHHHHHHH----HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             96899998632----10365328988999999999999999688998579997487348999875320578970799707
Q gi|254780153|r   24 RPGWSLGILEG----ALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE   99 (391)
Q Consensus        24 ~p~~v~~~~~~----~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g   99 (391)
                      +|. |++++.+    ...|++-++.++.+.+.+=.+. |.-+.+..++ ++|.+ |---++..++..|.++||.+++.+=
T Consensus        40 pp~-i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~-r~~~~i~~e~-i~~~p-~VVpgi~~~I~~~T~~gd~Vvi~tP  115 (388)
T COG1168          40 PPE-IIEALRERVDHGVFGYPYGSDELYAAIAHWFKQ-RHQWEIKPEW-IVFVP-GVVPGISLAIRALTKPGDGVVIQTP  115 (388)
T ss_pred             CHH-HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCCCCE-EEECC-CCHHHHHHHHHHHCCCCCEEEECCC
T ss_conf             879-999999998658778878877899999999997-1377788552-89837-5127699999983769982696488


Q ss_pred             CHHHHHHHHHHHCCCC--CEEEEECCCCCCCCHHHCCCC------CCEEEEEEECCCCEEECCEE-----EECCCCCCEE
Q ss_conf             3688888765323876--306740577765786767855------65799742024202203203-----5025686148
Q gi|254780153|r  100 SFGLGWMSDIRQLSLQ--DVREFTAPYGSLPDFSKVDFD------RDVVFVWNGTTSGVCVPDVG-----FIPESREGLV  166 (391)
Q Consensus       100 ~~~~r~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~------~~v~~~h~ETstGv~~~~~~-----~~~~~~~~ll  166 (391)
                      .+. -++..+..-+..  ..-..+...+...|+++++..      +...+|+=-.-||-.-...+     .+|..+++++
T Consensus       116 vY~-PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~V  194 (388)
T COG1168         116 VYP-PFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRV  194 (388)
T ss_pred             CCH-HHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             861-8999875169679746643469847752999999984377608999379999986436999999999999839989


Q ss_pred             EEEECCH---HHH-CCCCC-------CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf             8640110---110-25455-------68579997001200176651--54456778887654114457783123200112
Q gi|254780153|r  167 ICDATSA---VFA-RHIDF-------NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG  233 (391)
Q Consensus       167 ivD~vSs---~g~-~p~d~-------~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~  233 (391)
                      |.|=+-+   +.+ ..+.+       .+..+..+|+-|.|.. +|+  +.++++.+.+...              +....
T Consensus       195 ISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNl-aGL~~a~~Ii~n~~lr~~--------------~~~~l  259 (388)
T COG1168         195 ISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNL-AGLKCAYIIISNRELRAK--------------FLKRL  259 (388)
T ss_pred             EEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCC-HHHHHEEEEECCHHHHHH--------------HHHHH
T ss_conf             830335661216987665432695543235998405221560-444421478348899999--------------99999


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCEEEE
Q ss_conf             32103347864466644889999999986201031--89999999977999999987479-7167668820036531789
Q gi|254780153|r  234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG--LSACVERCNANAAVLFQFIQEND-WIENLAVDETTRSNTSICM  310 (391)
Q Consensus       234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG--l~~~~~r~~~~a~~l~~~i~~~~-~~~~~~~~~~~rS~~~v~~  310 (391)
                      +       ....+-|+++++.|...+.+    +|+  |+....--+.+.+.+.+.+.+.. +.....++-       |.+
T Consensus       260 ~-------~~~~~~~n~lg~~A~~aAY~----~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~g-------TYL  321 (388)
T COG1168         260 K-------RNGLHGPSALGIIATEAAYN----QGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQG-------TYL  321 (388)
T ss_pred             H-------HHCCCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC-------CEE
T ss_conf             8-------73379984688999999997----26499999999999989999999986598747866887-------566


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEE--CCCCCCHHHHHHHHHHHH
Q ss_conf             824731011373456788899999-8886282872665-5676750-5686--158889999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVW--VGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg--~~g~i~~~dv~~L~~aLe  376 (391)
                      .--|=.-..++.+       .+.. .+.+.++++..|. +...|.| +|+-  |--.+-.+-+++|..+|+
T Consensus       322 ~WLD~r~l~l~d~-------~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~  385 (388)
T COG1168         322 AWLDCRELGLDDS-------ELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALK  385 (388)
T ss_pred             EEEECCCCCCCHH-------HHHHHHHHHHCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf             6532002389857-------899999975157135787567678745888637988999999999999985


No 307
>PRK13578 ornithine decarboxylase; Provisional
Probab=97.78  E-value=0.0035  Score=39.66  Aligned_cols=302  Identities=11%  Similarity=0.012  Sum_probs=143.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHCCCCCEEEEE---CCC
Q ss_conf             999999999999688998579997487348999875320578970799-7073688888765323876306740---577
Q gi|254780153|r   49 RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL-AWESFGLGWMSDIRQLSLQDVREFT---APY  124 (391)
Q Consensus        49 i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~-~~g~~~~r~~~~~~~~~~~~~~~~~---~~~  124 (391)
                      ...++++...++|+...   .+|+..|-|++.-++++.++.+||.+++ -|..-|---.  +.-..++....+.   .++
T Consensus       175 ~~~eAq~~AA~~FGAD~---TyFvvNGTS~~nk~v~~a~~~pGD~VLvdRN~HKSv~~G--ALIlsGA~PVYl~p~rN~~  249 (720)
T PRK13578        175 AAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG--ALIQAGATPVYLETARNPF  249 (720)
T ss_pred             CHHHHHHHHHHHHCCCE---EEEEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH--HHHHCCCEEEEECCCCCCC
T ss_conf             44799999999849982---699957710889999997458999999656435777778--8986697679966646756


Q ss_pred             CCC--CCH-----H----HC--------CC--CCCEEEEEEECCCCEEECCEEEE---CCCCCCEEEEEECCHHHH---C
Q ss_conf             765--786-----7----67--------85--56579974202420220320350---256861488640110110---2
Q gi|254780153|r  125 GSL--PDF-----S----KV--------DF--DRDVVFVWNGTTSGVCVPDVGFI---PESREGLVICDATSAVFA---R  177 (391)
Q Consensus       125 g~~--~~~-----~----~~--------~~--~~~v~~~h~ETstGv~~~~~~~~---~~~~~~llivD~vSs~g~---~  177 (391)
                      |.+  .+.     +    .+        +.  ...++++.+.|=.|+..+...++   .+..+ .+++|.-= ++-   .
T Consensus       250 GiiggI~~~~f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~TYdGi~yn~~~I~~~i~~~~~-~ilfDEAw-~~~~~F~  327 (720)
T PRK13578        250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAIIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAW-VGYEQFI  327 (720)
T ss_pred             CEECCCCHHHCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHCC-EEEEECCH-HHHHHCC
T ss_conf             511674857527577898887436333123488618999468753542349999999864078-38985110-2144328


Q ss_pred             CC-----------CCCCCE-EEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCC
Q ss_conf             54-----------556857-999700120017665154456778887654114457783123200112321033478644
Q gi|254780153|r  178 HI-----------DFNKLD-VVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETI  245 (391)
Q Consensus       178 p~-----------d~~~iD-v~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (391)
                      |+           ..+.-+ ++.-|.+|=|++-+.-|.+-++..-+      +..   .++.+-.....+...   .+  
T Consensus       328 P~~~d~~p~~l~~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI------~g~---~r~v~~~rfn~a~mm---h~--  393 (720)
T PRK13578        328 PMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHI------KGQ---ARYCPHKRFNNAFML---HA--  393 (720)
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCC------CCC---CCCCCHHHHHHHHHH---HC--
T ss_conf             5311246433345877765046630655544322221012245434------666---566788999999987---70--


Q ss_pred             CCCCHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCC------------------------
Q ss_conf             666448899-99999986201031899999999779999999874-7971676688------------------------
Q gi|254780153|r  246 NTPSLLCIE-DYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE-NDWIENLAVD------------------------  299 (391)
Q Consensus       246 ~TP~v~~i~-al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~-~~~~~~~~~~------------------------  299 (391)
                      -|-|-..+. .|..+.++.+.+.|- .++.++-+.+...|..+.+ ...+.+++++                        
T Consensus       394 STSPsY~L~ASLDv~A~m~~g~~G~-~L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w~~  472 (720)
T PRK13578        394 STSPFYPLFAALDVNAKMHEGESGR-RLWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSF  472 (720)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCC
T ss_conf             7880899999879999997312145-899999999999999998654442255752126860354888886125010246


Q ss_pred             ---C------------CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf             ---2------------0036531789824731011373456788899999888628287266556767505686158889
Q gi|254780153|r  300 ---E------------TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVE  364 (391)
Q Consensus       300 ---~------------~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~  364 (391)
                         .            -.--++=+++.++.=..........+.-...+.++|.+.|+.+......+.-  |=++.+  .+
T Consensus       473 ~Pg~~WHGf~g~~~~~~~lDP~Klti~tPGi~~~~g~~~~~GIpA~il~~yLre~gIvvEktdl~~IL--fL~T~G--~t  548 (720)
T PRK13578        473 EPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGVPATILANYLRENGIVPEKCDLNSIL--FLLTPA--ED  548 (720)
T ss_pred             CCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEE--EEECCC--CC
T ss_conf             88742246555576634226737998536745566542136875899999998769079854775079--997267--88


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  365 KEDLLLLCDWLR  376 (391)
Q Consensus       365 ~~dv~~L~~aLe  376 (391)
                      .+++++|+.+|-
T Consensus       549 ~~k~~~Lv~aL~  560 (720)
T PRK13578        549 MAKLQQLVAMLA  560 (720)
T ss_pred             HHHHHHHHHHHH
T ss_conf             899999999999


No 308
>TIGR01814 kynureninase kynureninase; InterPro: IPR010111   This entry describes kynureninase, it is a pyridoxal-5'-phosphate (PLP)-dependent enzyme that catalyzes the hydrolytic cleavage of L-kynurenine to anthranilic acid and L-alanine. Kynurinine is a Trp breakdown product and a precursor for NAD. This reaction is a key step in the catabolism of L-tryptophan by Pseudomonas fluorescens and some other bacteria (1). In fungi and vertebrates, kynurenine is first hydroxylated to 3-hydroxykynurenine, which is the preferred substrate of kynureninase in those organisms, resulting in 3-hydroxyanthranilate and L-alanine.   Sequence alignment with other PLP-dependent enzymes indicated that kynureninase is in subgroup IVa of the aminotransferases, along with nifS, CsdB, and serine-pyruvate aminotransferase, which suggests that kynureninase has an aminotransferase fold .; GO: 0030170 pyridoxal phosphate binding, 0030429 kynureninase activity, 0006569 tryptophan catabolic process, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=97.63  E-value=0.0031  Score=39.94  Aligned_cols=316  Identities=15%  Similarity=0.115  Sum_probs=190.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC-----CCE--EEEEECCHHHHH--HHHHHHCC
Q ss_conf             988999999999999999688998579997487348999875320578-----970--799707368888--87653238
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGY-----RGV--DVLAWESFGLGW--MSDIRQLS  113 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~-----~~~--~~~~~g~~~~r~--~~~~~~~~  113 (391)
                      ..+...+-+.+...+++++....+ +|++++ |=|--.-..+.++.++     .+.  .+.-.+.|=...  ++-..++.
T Consensus        81 ~~pW~~~~~~~~~l~~~vlvA~~~-evv~~n-slT~NLh~ll~~Fy~pqredt~~R~kIL~E~~aFPSD~Ya~e~Q~~L~  158 (444)
T TIGR01814        81 KVPWFTLDEALLKLLADVLVAQEK-EVVVMN-SLTVNLHKLLASFYKPQREDTEKRTKILLEAKAFPSDLYAIESQLRLH  158 (444)
T ss_pred             CCCCCCCCHHHHCCCCHHEECCCC-CEEEEC-HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf             788620345353143100111665-366300-433889999998707542477334575651678872799999997467


Q ss_pred             CCCEE----EEECCCCCC-CCHH----HCCCC-CCEEE---EEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCC
Q ss_conf             76306----740577765-7867----67855-65799---7420242022032035--025686148864011011025
Q gi|254780153|r  114 LQDVR----EFTAPYGSL-PDFS----KVDFD-RDVVF---VWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARH  178 (391)
Q Consensus       114 ~~~~~----~~~~~~g~~-~~~~----~~~~~-~~v~~---~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p  178 (391)
                      +.++.    .++...|+. ....    .++.. +.+++   .|..==||=..+..++  .++.+++++|.|=.=+++..|
T Consensus       159 g~~~e~~l~~~~p~~~e~tLr~~di~~~iE~~~D~~A~v~l~~V~Y~TGQ~fDm~~~t~~a~~~~~~~vfDLAHa~~NvP  238 (444)
T TIGR01814       159 GLEPEEHLVQVEPREAEETLRLEDILDTIEKNGDEIALVLLSGVQYYTGQLFDMRAITRAAHKRGAIVVFDLAHAVANVP  238 (444)
T ss_pred             CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCC
T ss_conf             98734412677422344211078899999853897899984784430236789999999970897659960222110763


Q ss_pred             CC--CCCCEEEEECCHHCCCCCCCC---EEEEECHHHHHHHHHCCCCCCC--CCHHHCCHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             45--568579997001200176651---5445677888765411445778--3123200112321033478644666448
Q gi|254780153|r  179 ID--FNKLDVVTFSAQKVLGGEAGF---GIIILSPASVERLEKYVPSWPL--PKIFRMVKGGRVMEGLFCGETINTPSLL  251 (391)
Q Consensus       179 ~d--~~~iDv~~a~sQK~l~~ppGl---~~v~~s~~al~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~TP~v~  251 (391)
                      ++  .|++|..+=++=|=|-.+||.   .||--++.--++. .....|+-  +.-|.+...... .....+-..-||||+
T Consensus       239 l~LH~w~VDFA~WC~YKYLNa~pg~v~~~F~h~~~~~~~~~-~~~lwWwh~~~~rF~m~~~~~~-~~g~~~~~~snPpv~  316 (444)
T TIGR01814       239 LDLHDWGVDFACWCSYKYLNASPGIVVGAFVHEKHAHEELP-RLALWWWHARPKRFKMENTLVL-RPGAAAFRLSNPPVL  316 (444)
T ss_pred             CCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHCCCCH-HCCCCCCCCCCHHHCCCHHCCC-CCCCHHHHHCCCCHH
T ss_conf             22578888777884660116113555123102244114200-0255324576343244110255-642024330587688


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-------------C-CCCCCCCC-CCCEEEEEECCCC
Q ss_conf             8999999998620103189999999977999999987479716-------------7-66882003-6531789824731
Q gi|254780153|r  252 CIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE-------------N-LAVDETTR-SNTSICMKIVDSD  316 (391)
Q Consensus       252 ~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~-------------~-~~~~~~~r-S~~~v~~~~~d~~  316 (391)
                      .+.+|..+|+.+. +-++++..+|+-.+...+-+-++..-...             . .+.+...| |...+  .++.  
T Consensus       317 ~~a~L~sSL~~F~-q~~m~~lRkKS~~LTdyl~~L~~~~~~~~~~~rie~~k~~~~I~TP~~~~~Rgcqls~--~~~~--  391 (444)
T TIGR01814       317 SVAALRSSLDLFD-QASMEALRKKSLLLTDYLEELIKARCAYKKALRIETLKLVLTIITPEDHAQRGCQLSL--EFPS--  391 (444)
T ss_pred             HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCCCEEEE--EECC--
T ss_conf             8988885477663-0584899999988877899999852258512320357856897378881215543789--7078--


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHH
Q ss_conf             011373456788899999888628287266556767505686-158889999999999999999
Q gi|254780153|r  317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~  379 (391)
                              +..-...+...|.+.|+++|-   | .|.+||+. +-=+++=.||-.+++.|+.+.
T Consensus       392 --------~~~~~~~~~~~L~~r~vv~D~---R-~P~vIR~APvpLYn~F~DVy~~V~~L~~~~  443 (444)
T TIGR01814       392 --------DRKEDAAVFQALIKRGVVIDF---R-EPSVIRLAPVPLYNTFVDVYDAVEVLEEIL  443 (444)
T ss_pred             --------CCCHHHHHHHHHHHCCCEEEC---C-CCCCEEEECCCCCCCEEHHHHHHHHHHHHH
T ss_conf             --------887035789999867963302---5-888327627645365504989999999994


No 309
>PRK04311 selenocysteine synthase; Provisional
Probab=97.52  E-value=0.008  Score=37.34  Aligned_cols=158  Identities=22%  Similarity=0.273  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-------ECCHHHHHHHHHHHCCCCCEEEE-EC
Q ss_conf             99999999996889985799974873489998753205789707997-------07368888876532387630674-05
Q gi|254780153|r   51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-------WESFGLGWMSDIRQLSLQDVREF-TA  122 (391)
Q Consensus        51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-------~g~~~~r~~~~~~~~~~~~~~~~-~~  122 (391)
                      ..+.+.|+++.+..+   ++++.-.+ .|.--++ |-+..|..+++.       .|+|  |. -++-+..++....+ ..
T Consensus       132 ~~v~~ll~~ltgaE~---a~vVNNNA-aAv~L~l-~~la~gkEviVSRGelvEIGGsF--Ri-Pdim~~sGa~L~EVGtT  203 (465)
T PRK04311        132 RALAALLCELTGAED---ALVVNNNA-AAVLLAL-NALAAGKEVIVSRGELVEIGGAF--RI-PDVMRQAGAKLVEVGTT  203 (465)
T ss_pred             HHHHHHHHHHHCCCE---EEEECCCH-HHHHHHH-HHHHCCCEEEEECCCEEEECCCC--CC-HHHHHHCCCEEEECCCC
T ss_conf             999999998549873---79982848-9999999-98627985999645356526765--62-78998659888743767


Q ss_pred             CCCCCCCHHH-CCCCCC-EEEEEEE--CCCCEE----ECCEEEECCCCCCEEEEEECCHHH---------HCCC--C--C
Q ss_conf             7776578676-785565-7997420--242022----032035025686148864011011---------0254--5--5
Q gi|254780153|r  123 PYGSLPDFSK-VDFDRD-VVFVWNG--TTSGVC----VPDVGFIPESREGLVICDATSAVF---------ARHI--D--F  181 (391)
Q Consensus       123 ~~g~~~~~~~-~~~~~~-v~~~h~E--TstGv~----~~~~~~~~~~~~~llivD~vSs~g---------~~p~--d--~  181 (391)
                      .-+...|-+. +...+. +..||..  -..|-.    ......+++.++.+++.|-=|...         .+|.  +  .
T Consensus       204 NrT~l~DY~~AI~~~Ta~llkvH~SN~~i~GFt~~v~~~eL~~l~~~~~ip~~~DlGSG~l~~~~~~gl~~Ep~v~~~l~  283 (465)
T PRK04311        204 NRTHLRDYEDAINENTALLLKVHTSNYRIVGFTKEVSEAELAALGKEHGLPVVVDLGSGSLVDLSQYGLPDEPTVQELLA  283 (465)
T ss_pred             CCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             88887999986495654899995687654674688999999999987599279988875213653126999998899997


Q ss_pred             CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC
Q ss_conf             685799970012001766515445677888765411
Q gi|254780153|r  182 NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY  217 (391)
Q Consensus       182 ~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~  217 (391)
                      .+.|++.+|.-|-|||| .-|+++-++++++++.+.
T Consensus       284 ~GaDLVtFSGDKLLGGP-QAGIIvGkk~lI~~lkkn  318 (465)
T PRK04311        284 AGVDLVTFSGDKLLGGP-QAGIIVGKKELIERLKKH  318 (465)
T ss_pred             CCCCEEEEECCCCCCCC-CCCEEECHHHHHHHHHHC
T ss_conf             29988998554014798-543374009999999868


No 310
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958   This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate.  L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=97.45  E-value=0.0099  Score=36.77  Aligned_cols=281  Identities=13%  Similarity=0.124  Sum_probs=162.5

Q ss_pred             HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC-CCCC--CCCHH
Q ss_conf             999996889985799974873489998753205-7897079970736888887653238763067405-7776--57867
Q gi|254780153|r   56 LTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA-PYGS--LPDFS  131 (391)
Q Consensus        56 ~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~-~~g~--~~~~~  131 (391)
                      ++..-+.. ||   +++++|++.|+|.++..|. .+|+=+++===+|...  .-.++..+.+++.++- -..+  -.|++
T Consensus       102 ~~~~~l~a-~D---V~ltsGCsqAIe~~I~aLA~~pG~NILvPRPGfP~Y--~t~A~~~~lEvr~ydLdlPe~~WeiDL~  175 (424)
T TIGR01265       102 RLPGKLSA-DD---VVLTSGCSQAIEIVIEALAQNPGANILVPRPGFPLY--DTRAAFSGLEVRLYDLDLPEKDWEIDLD  175 (424)
T ss_pred             CCCCCCCC-CC---EEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCH--HHHHHHCCCCCCCCCCCCCCCCCEECHH
T ss_conf             88887576-64---488477226899999997268988355687778668--9999771872000246788875236478


Q ss_pred             HCCC---CCCEEE-EEE-ECCCCEEEC---CEEE--ECCCCCCEEEEEECCH---HHH----CCC-CCCCCE-----EEE
Q ss_conf             6785---565799-742-024202203---2035--0256861488640110---110----254-556857-----999
Q gi|254780153|r  132 KVDF---DRDVVF-VWN-GTTSGVCVP---DVGF--IPESREGLVICDATSA---VFA----RHI-DFNKLD-----VVT  188 (391)
Q Consensus       132 ~~~~---~~~v~~-~h~-ETstGv~~~---~~~~--~~~~~~~llivD~vSs---~g~----~p~-d~~~iD-----v~~  188 (391)
                      .++.   .+-+++ +-| ..-+|-.+.   +.++  .+++.+.++|.|=|=.   |++    -|| .+..++     +..
T Consensus       176 ~le~l~DekT~A~vv~NP~NPCGsVF~~~HL~k~~~~A~kl~i~iIADEiY~~~Vf~dkDPn~~F~p~a~f~~~VPvl~l  255 (424)
T TIGR01265       176 GLESLADEKTVAIVVINPSNPCGSVFSRDHLEKIAEVARKLGIPIIADEIYGHLVFGDKDPNAPFVPMASFASIVPVLSL  255 (424)
T ss_pred             HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             99876326876999847566788887888899999999870982687763164144889788862230035786886886


Q ss_pred             ECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             700120017665--154456778887654114457783123200112321033478644666448899999999862010
Q gi|254780153|r  189 FSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM  266 (391)
Q Consensus       189 a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~  266 (391)
                      .|--|.| ..||  ||=+++-++    .......+.      .....+.      -+..-=|+|+.=-||-..|+.-.++
T Consensus       256 GgisKrW-~VPGWRlGWi~~~Dp----~gi~~~~k~------~~gl~~~------~~~~~gP~Ti~QgALP~IL~~Tp~e  318 (424)
T TIGR01265       256 GGISKRW-VVPGWRLGWIIVHDP----HGILRDTKV------LQGLKNV------LQLILGPATIVQGALPDILENTPQE  318 (424)
T ss_pred             CCHHCCC-CCCCCEEEEEEEECC----CCCCCCCCH------HHHHHHH------HCCCCCCHHHHHHHHHHHHHHCCHH
T ss_conf             3101123-277622432778888----775444403------3898998------4234781578999999998516876


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE-----
Q ss_conf             318999999997799999998747971676688200365317898247310113734567888999998886282-----
Q gi|254780153|r  267 GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEI-----  341 (391)
Q Consensus       267 gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~-----  341 (391)
                      - ++.....-+++++..|+.|....++.+. .+|+...-  +-+++.-..+.++  ..+-.|..++   ..+|++     
T Consensus       319 f-F~~~~~~lk~na~l~y~~L~~ipg~~c~-~KP~G~MY--~mvkl~~~~~~~i--kdD~dFc~kL---~~EESv~~LPG  389 (424)
T TIGR01265       319 F-FDKKISVLKENAELCYEELKDIPGLTCP-KKPEGSMY--LMVKLELELLEEI--KDDVDFCEKL---VKEESVICLPG  389 (424)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCEE--EHHHCCHHHCCCC--CCCHHHHHHH---HHHCCCEECCC
T ss_conf             8-8999999885188999997348876476-48887500--0201016534464--6418999999---87376335460


Q ss_pred             -EECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             -87266556767505686158889999999999999
Q gi|254780153|r  342 -AYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       342 -~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                       ++++.+|      +||...-  +.+.++--++-|+
T Consensus       390 ~~f~~pnw------~Rit~t~--~~~~~~Ea~~Rik  417 (424)
T TIGR01265       390 SAFGLPNW------VRITITV--PKSMLEEALERIK  417 (424)
T ss_pred             EEECCCCC------EEEEECC--CHHHHHHHHHHHH
T ss_conf             02559984------7998527--6778999999998


No 311
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=97.44  E-value=0.01  Score=36.65  Aligned_cols=313  Identities=15%  Similarity=0.094  Sum_probs=160.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEEEEC-CCCHHHHHHHHH--HCC-C----CCCEEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             89999999999999996889985799974-873489998753--205-7----897079970736888887653238763
Q gi|254780153|r   45 LGKERINKAIQLTRKVLEVPENYRIAIVP-ASDTGAVEMALW--SLL-G----YRGVDVLAWESFGLGWMSDIRQLSLQD  116 (391)
Q Consensus        45 ~f~~i~~~~~~~l~~l~~~p~~y~v~~l~-GsgT~~~ea~~~--nl~-~----~~~~~~~~~g~~~~r~~~~~~~~~~~~  116 (391)
                      =..+++.+.++.|.++-+...   +-+-+ +|++|-+.+..+  ... .    +.+++++-....|-.-+  .+...+..
T Consensus       112 G~Lq~i~elq~~L~eITGmd~---vSlqP~aGAqGE~aGll~Irayh~~~G~~~R~~vLiP~SAHGTNPA--sA~maG~~  186 (490)
T PRK04366        112 GALELMYELQEWLKEITGMDA---VTLQPAAGAHGELTGLLIIRAYHEARGDTKRTEVIVPDSAHGTNPA--SAAMAGFK  186 (490)
T ss_pred             HHHHHHHHHHHHHHHHHCCCE---EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH--HHHHCCCE
T ss_conf             999999999999999859985---8406898559999999999999997598577679985556789878--88755944


Q ss_pred             EEEEEC-CCCCCCCHHHCCC----CCCEEEEEEECCCCEEECC-EEE--ECCCCCCEEEEEECCH--HHH--CCCCCCCC
Q ss_conf             067405-7776578676785----5657997420242022032-035--0256861488640110--110--25455685
Q gi|254780153|r  117 VREFTA-PYGSLPDFSKVDF----DRDVVFVWNGTTSGVCVPD-VGF--IPESREGLVICDATSA--VFA--RHIDFNKL  184 (391)
Q Consensus       117 ~~~~~~-~~g~~~~~~~~~~----~~~v~~~h~ETstGv~~~~-~~~--~~~~~~~llivD~vSs--~g~--~p~d~~~i  184 (391)
                      +..+.. +.| .+|+++++.    ..+..++.|=+..|+..+. .++  +.|+.|.++..|+.--  +.+  .|-| -++
T Consensus       187 Vv~v~~~~~G-~vDle~Lka~~~~~~A~lMiTnPnt~GvfE~~i~ei~~ivH~~Ggl~Y~DGANlNAi~G~~rPgd-~G~  264 (490)
T PRK04366        187 VVEIPSNEDG-LVDLEALKAAVGEDTAALMLTNPNTLGLFERNIKEIAEIVHEAGGLLYYDGANLNAILGKVRPGD-MGF  264 (490)
T ss_pred             EEEECCCCCC-CCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHH-CCC
T ss_conf             6882579899-81999999987531031355157653602248999999999719989865756200013147766-587


Q ss_pred             EEEEECCHHCCC-----CCCCCEEEEECHHHHHHHHHCC-CCCCCCCHHHCCHHHHHHCCCCC-CCCCCCCCHHHHHHHH
Q ss_conf             799970012001-----7665154456778887654114-45778312320011232103347-8644666448899999
Q gi|254780153|r  185 DVVTFSAQKVLG-----GEAGFGIIILSPASVERLEKYV-PSWPLPKIFRMVKGGRVMEGLFC-GETINTPSLLCIEDYI  257 (391)
Q Consensus       185 Dv~~a~sQK~l~-----~ppGl~~v~~s~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~TP~v~~i~al~  257 (391)
                      |++-.--+|-|+     |=||.|+|.+++++..-+-.-. ........+++...    ....+ .+++..-.     .+-
T Consensus       265 Dv~HlNLHKTFstPHGGGGPG~Gpv~v~~~L~pfLP~P~v~~~~~~y~l~~~~~----~siG~v~~f~Gn~~-----vl~  335 (490)
T PRK04366        265 DVVHLNLHKTFSTPHGGGGPGSGPVGVKKELAPFLPVPVVEKDGGRYRLDYDRP----KSIGRVRAFYGNFG-----VLV  335 (490)
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCEECCCCCCCCCCCCC----CCCCCCCCCCCCHH-----HHH
T ss_conf             457531342344578888888775325544120088870213688311267887----66321120247518-----899


Q ss_pred             HHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999862010--318999999997799999998747971676688200365317898247310113734567888999998
Q gi|254780153|r  258 DALLWLKKM--GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       258 ~~l~~i~~~--gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      .+.-||...  .||...-+..--+++.+...+...  +....  +..  .+. =|.+....+    .........++.++
T Consensus       336 ra~~Yi~~lG~~GL~~~s~~AvLNANYl~~~L~~~--~~~~y--~~~--~~H-Efv~~~~~~----~k~~gv~~~DiaKr  404 (490)
T PRK04366        336 RAYAYIRSLGAEGLREVSEDAVLNANYLMARLKDV--YDLPY--PRR--CMH-EFVLSGKRL----KKETGVRALDIAKR  404 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCC--CCC--EEE-EEEECCHHH----HHHCCCCHHHHHHH
T ss_conf             99999998667478999999999999999985355--75788--997--678-999643775----44239989999999


Q ss_pred             HHHCCEEECCCCCCCC-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8862828726655676-750568615888999999999999999999999
Q gi|254780153|r  336 LEKEEIAYDIGSYRDA-PLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       336 l~~~g~~~~~~~~r~~-~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      |...|..--+-.+... ...+=|----.=+.+++|+++++|.....+.+.
T Consensus       405 LlDyG~H~pT~~fPliV~e~lmiEPTEsEske~LD~f~~am~~I~~ea~~  454 (490)
T PRK04366        405 LLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIDAMKEIAEEAKE  454 (490)
T ss_pred             HHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             85779997610166657873153675777999999999999999999985


No 312
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase; InterPro: IPR006234    These sequences represent O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis..
Probab=97.40  E-value=0.0015  Score=42.06  Aligned_cols=230  Identities=18%  Similarity=0.178  Sum_probs=141.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH--HHHHHHCCCCCEEEEEC
Q ss_conf             8999999999999999688998579997487348999875320578970799707368888--87653238763067405
Q gi|254780153|r   45 LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW--MSDIRQLSLQDVREFTA  122 (391)
Q Consensus        45 ~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~--~~~~~~~~~~~~~~~~~  122 (391)
                      +=.+.++   ++|+-|=|.    +..+-|.||-.++-|+++.|++-||+++..=.-||.-.  ..++-.+-|+++...  
T Consensus        54 PTv~~FE---~Rla~LEGA----e~A~AtAsGMsAi~A~l~~L~~AGDhvv~sRSlFGst~~~~~~~l~rFGv~v~fv--  124 (386)
T TIGR01325        54 PTVKVFE---ERLALLEGA----ERAVATASGMSAILAALMALLSAGDHVVASRSLFGSTVVLVSEILPRFGVEVSFV--  124 (386)
T ss_pred             CCHHHHH---HHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHCCEEEEEECCCCCCCEEEEEC--
T ss_conf             6157889---999974060----3788642138999999999861687799851000320021012534354067517--


Q ss_pred             CCCCCCCHHHCCCC--CCEEEEEEECCCCEEECCEE--------EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEEC
Q ss_conf             77765786767855--65799742024202203203--------502568614886401--1011025455685799970
Q gi|254780153|r  123 PYGSLPDFSKVDFD--RDVVFVWNGTTSGVCVPDVG--------FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFS  190 (391)
Q Consensus       123 ~~g~~~~~~~~~~~--~~v~~~h~ETstGv~~~~~~--------~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~  190 (391)
                         ...|+.+|+.+  ..--.+..||-+   ||..+        .++|..|+++|||=+  |=++..|+. -+.||++.|
T Consensus       125 ---~~~Dl~~WeaA~~~nTkl~f~EtPS---NPl~e~~Di~AlaELAHA~GA~lvvDN~f~tP~~qqPL~-lGaDvvv~S  197 (386)
T TIGR01325       125 ---DATDLKAWEAALKPNTKLVFVETPS---NPLAELVDIAALAELAHAVGALLVVDNVFATPVLQQPLK-LGADVVVYS  197 (386)
T ss_pred             ---CCCCHHHHHHHCCCCCCEEEEECCC---CHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCC-CCCEEEEEC
T ss_conf             ---8678788898569995078863688---704679999999998873341002114564100138864-564079864


Q ss_pred             CHHCCCCCC-CCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf             012001766-5154456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r  191 AQKVLGGEA-GFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL  269 (391)
Q Consensus       191 sQK~l~~pp-Gl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl  269 (391)
                      +=|.+=|-. ++|=+++..+.+-+     .  +   +-++..+        .|   -|-+-|.-+.|.+-|+      .|
T Consensus       198 ATK~IDGqGRvlGGv~~G~~e~~~-----~--~---v~~~lr~--------~G---palSpFNAW~lLkGlE------TL  250 (386)
T TIGR01325       198 ATKHIDGQGRVLGGVILGSEELME-----E--F---VAKFLRH--------TG---PALSPFNAWVLLKGLE------TL  250 (386)
T ss_pred             CCEEECCCCCEECCEEECCHHHHH-----H--H---HHHHHHC--------CC---CCCCHHHHHHHHHHHH------HH
T ss_conf             620113875401214536077753-----4--8---9999742--------57---4323678999850345------78


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCC----CC-CCCCCC--------CCCCEEEEEECCCCC
Q ss_conf             9999999977999999987479716----76-688200--------365317898247310
Q gi|254780153|r  270 SACVERCNANAAVLFQFIQENDWIE----NL-AVDETT--------RSNTSICMKIVDSDI  317 (391)
Q Consensus       270 ~~~~~r~~~~a~~l~~~i~~~~~~~----~~-~~~~~~--------rS~~~v~~~~~d~~~  317 (391)
                      +=|.+++...|-.|-+||+..+...    ++ +..|.+        =.-+||+|.+.+|+.
T Consensus       251 ~lR~~~~~~sAl~lA~~L~~~p~v~~V~Y~~lP~HPq~~lar~Q~~GGG~Vv~f~l~~~ed  311 (386)
T TIGR01325       251 SLRVQKQADSALALAEWLEEQPKVQAVYYPGLPDHPQHELARRQQSGGGTVVAFDLKGGED  311 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHH
T ss_conf             9999861478999999997089557987587878852689998418996799973268645


No 313
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=97.30  E-value=0.015  Score=35.62  Aligned_cols=279  Identities=15%  Similarity=0.127  Sum_probs=141.5

Q ss_pred             EEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEE
Q ss_conf             79997487348999875320578970799707368888876532387630674-057776578676785-----565799
Q gi|254780153|r   68 RIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVF  141 (391)
Q Consensus        68 ~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~  141 (391)
                      .|++ --|-+.++.+++.-|+.+||.+++-+=.|-- |.....-.++..|... ....+-.+++++++.     .+.+.+
T Consensus       210 di~~-gnGvSE~i~~am~Alln~GDeVLiP~P~YPl-yta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT~kTKAIVI  287 (518)
T PRK13355        210 DIYT-GNGVSELINLSMSALLDDGDEVLVPSPDYPL-WTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKITSKTKAIVI  287 (518)
T ss_pred             HEEE-CCCHHHHHHHHHHHHCCCCCEEEECCCCCCC-HHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf             3565-4776799999999836899989825999977-8999886098788987452217788999998535715579999


Q ss_pred             EEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHHHC----CCCC-----CCCEEEEECCHHCCCCCCCCEEE--E
Q ss_conf             742024202203203-----502568614886401101102----5455-----68579997001200176651544--5
Q gi|254780153|r  142 VWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVFAR----HIDF-----NKLDVVTFSAQKVLGGEAGFGII--I  205 (391)
Q Consensus       142 ~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g~~----p~d~-----~~iDv~~a~sQK~l~~ppGl~~v--~  205 (391)
                      ..=..-||..++...     .++.+++.++|.|=+=+-...    ...+     +..-+.+-|.-|++. .+|.=+-  +
T Consensus       288 nNPNNPTGAVyS~E~LeeIaeiArehdLiIISDEIY~~LvYDg~~h~Siasla~d~~~It~NG~SKsya-MtGWRiGwmv  366 (518)
T PRK13355        288 INPNNPTGALYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM-IAGFRAGWMM  366 (518)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCEE-CCEEEEEEEE
T ss_conf             689898887889999999999999859699962302210068986304767088645999887766633-2201136654


Q ss_pred             ECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             677-8887654114457783123200112321033478644666448899999999862010318999999997799999
Q gi|254780153|r  206 LSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLF  284 (391)
Q Consensus       206 ~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~  284 (391)
                      ++. +...+           .+..-   ....     .++.-.+++..-++...+|.-.....-+-....|..++++.++
T Consensus       367 ~sG~~~~a~-----------~~Ie~---l~~L-----as~~lcsnvpaQ~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~  427 (518)
T PRK13355        367 LSGNKRHAK-----------DYIEG---LNML-----ANMRMCSNVPAQSVVQTALGGHQSVKDYTVPGGRLYDQRELVY  427 (518)
T ss_pred             ECCCHHHHH-----------HHHHH---HHHH-----HHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             248589999-----------99999---9998-----6045663689999999986287648999999999999999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCCEEEEECCCC
Q ss_conf             998747971676688200365317898247310113734567888999998886282872665--567675056861588
Q gi|254780153|r  285 QFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPLGLRVWVGVT  362 (391)
Q Consensus       285 ~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~~~RIg~~g~  362 (391)
                      +++...+++....++-.+     -.|--.|+..  .....+..|.   ..+|.++++++=-|.  .-..+.-|||+.-. 
T Consensus       428 e~Ln~IpGvscvkP~GAF-----YlFPkID~~~--~~i~dDeeFa---l~LL~Ee~VlVVPGsaFG~~~pghfRIsyap-  496 (518)
T PRK13355        428 DMLNAIPGISAVKPKAAF-----YIFPKIDVKI--FNIHSDEQFA---LDLLHEKHILISHGGAFNWDKPDHFRVVYLP-  496 (518)
T ss_pred             HHHHCCCCCEECCCCEEE-----EEEEECCCCC--CCCCCHHHHH---HHHHHHCCEEEECCCCCCCCCCCEEEEEECC-
T ss_conf             998359997658998158-----9955415344--8998999999---9999858999958754489998979999279-


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q ss_conf             899999999999999999
Q gi|254780153|r  363 VEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       363 i~~~dv~~L~~aLe~~~~  380 (391)
                       +.+++...++-|+..+.
T Consensus       497 -s~e~L~EA~~RI~~FL~  513 (518)
T PRK13355        497 -RLGMLEETMDELDDFFS  513 (518)
T ss_pred             -CHHHHHHHHHHHHHHHH
T ss_conf             -99999999999999999


No 314
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.03  E-value=0.028  Score=33.92  Aligned_cols=292  Identities=11%  Similarity=-0.003  Sum_probs=149.0

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             99999999996889985799974873489998753205-78--9707997073688888765323876306740577765
Q gi|254780153|r   51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSL  127 (391)
Q Consensus        51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~  127 (391)
                      =+-+..+.+|.+.+=..- -++. .||.+-||+.+..- .+  ..+.++...-+-+...-.-.+.....+.++..     
T Consensus       127 ~nfQTmi~dLTGm~vaNA-SllD-eaTAaAEAm~ma~r~~k~k~~~~~V~~~~~Pqt~~Vl~tra~~~gie~vv~-----  199 (954)
T PRK12566        127 LNFQQMTIDLTGLDLANA-SLLD-EATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLKTRAEGFGFELVVD-----  199 (954)
T ss_pred             HHHHHHHHHHHCCCCCCC-CCHH-HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEC-----
T ss_conf             999999999878760057-6000-899999999998987536888799889878889999996033579579963-----


Q ss_pred             CCHHHCCCCC-CEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEE--CCHHHHCCCCCCCCEEEEECCHHCCCCCC---
Q ss_conf             7867678556-57997420242022032035--0256861488640--11011025455685799970012001766---
Q gi|254780153|r  128 PDFSKVDFDR-DVVFVWNGTTSGVCVPDVGF--IPESREGLVICDA--TSAVFARHIDFNKLDVVTFSAQKVLGGEA---  199 (391)
Q Consensus       128 ~~~~~~~~~~-~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~--vSs~g~~p~d~~~iDv~~a~sQK~l~~pp---  199 (391)
                       ++++....+ ..++++.=.+.|...+....  .+|..+++++|.+  .|-..-.|--.++.|+++.++|- ||.|.   
T Consensus       200 -~~~~~~~~~~~gvlvqyP~~~G~i~d~~~~~~~ah~~gal~iv~~D~laL~lLk~PGe~GADIavG~~Qr-fGvPmgfG  277 (954)
T PRK12566        200 -EVDNLAQHAVFGALLQYPDTHGEVRDLRPLIDQLHGQQALACVAADLLSLLLLTPPGELGADVVLGSTQR-FGVPMGYG  277 (954)
T ss_pred             -CHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHHCCCCEEEEECCC-CCCCCCCC
T ss_conf             -8676676675899997899887614756789877345928998656768770498344187579840663-67655678


Q ss_pred             --CCEEEEECHHHHHHHHHC----C-CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCHHH
Q ss_conf             --515445677888765411----4-457783123200112321033478644666448899999999-86201031899
Q gi|254780153|r  200 --GFGIIILSPASVERLEKY----V-PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-LWLKKMGGLSA  271 (391)
Q Consensus       200 --Gl~~v~~s~~al~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-~~i~~~gGl~~  271 (391)
                        ..+|...+++...++-.+    . ..... .-+.+....+...=++..-|-|-=.-..+.|.-.++ --..--.||.+
T Consensus       278 GPhagffAtr~~~kR~mPGRiVGvS~D~~G~-~a~rlaLQTREQHIRReKATSNICTaQaLLA~mAamYAvYHGPeGLk~  356 (954)
T PRK12566        278 GPHAAFFACRDDYKRAMPGRIIGVSRDARGN-TALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKR  356 (954)
T ss_pred             CCCEEEEEEHHHHHCCCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf             8750233572446535997434037779979-513221336899998620100002778999999999998719999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
Q ss_conf             99999977999999987479716766882003653178982473101137345678889999988862828726655676
Q gi|254780153|r  272 CVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA  351 (391)
Q Consensus       272 ~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~  351 (391)
                      +.+|...++..+.+.+.+.+ +..  .+..+-  -.+++.+.+..             +.+.....+.++-+.     ..
T Consensus       357 IA~rih~~a~~la~~L~~~G-~~v--~~~~fF--DTl~v~~~~~~-------------~~i~~~A~~~~iNlR-----~~  413 (954)
T PRK12566        357 IAQRVHRLTAILAAGLEAKG-IKR--LNRHFF--DTLTLEVGGAQ-------------AAIIESAEAAQINLR-----IL  413 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CEE--CCCCEE--EEEEEECCCCH-------------HHHHHHHHHCCCEEE-----EE
T ss_conf             99999999999999998779-712--578615--67999648649-------------999999997797478-----71


Q ss_pred             C-CEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             7-50568615888999999999999
Q gi|254780153|r  352 P-LGLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       352 ~-~~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      . ..+.|++--..+.+|+..|++..
T Consensus       414 d~~~vgISlDEttt~~dl~~Ll~vF  438 (954)
T PRK12566        414 GRGRLGLSLDETCDEATVARLFDIF  438 (954)
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf             6997999805668899999999998


No 315
>PRK05367 glycine dehydrogenase; Provisional
Probab=96.88  E-value=0.037  Score=33.09  Aligned_cols=293  Identities=12%  Similarity=0.015  Sum_probs=149.6

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCC-CEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             99999999996889985799974873489998753205--789-707997073688888765323876306740577765
Q gi|254780153|r   51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYR-GVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSL  127 (391)
Q Consensus        51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~  127 (391)
                      =+-+..+-+|.+.+=.. .-++. +||.+-||+.+-.-  +++ .+.++...-+-+...-.-.+.....+.+...+    
T Consensus       128 ~nfQtmi~dLTGm~vaN-ASllD-eaTAaaEAm~ma~r~~k~k~~~~~V~~~~~Pqt~~Vl~Tra~~~giei~v~d----  201 (955)
T PRK05367        128 LNFQTMVCDLTGLPIAN-ASLLD-EATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVVRTRAEPLGIEVVVGD----  201 (955)
T ss_pred             HHHHHHHHHHHCCCCCC-CCHHH-HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEC----
T ss_conf             99999999986876004-32101-8999999999998862268887998898786389999960535797799957----


Q ss_pred             CCHHHCCCCC--CEEEEEEECCCCEEECCEEE--ECCCCCCEEEE--EECCHHHHCCCCCCCCEEEEECCHHCCCCCC--
Q ss_conf             7867678556--57997420242022032035--02568614886--4011011025455685799970012001766--
Q gi|254780153|r  128 PDFSKVDFDR--DVVFVWNGTTSGVCVPDVGF--IPESREGLVIC--DATSAVFARHIDFNKLDVVTFSAQKVLGGEA--  199 (391)
Q Consensus       128 ~~~~~~~~~~--~v~~~h~ETstGv~~~~~~~--~~~~~~~lliv--D~vSs~g~~p~d~~~iDv~~a~sQK~l~~pp--  199 (391)
                        .++.....  ..++++.=.+.|...+..+.  .+|+.++++||  |-.|-..-.|--.++.|+++.++|- ||.|.  
T Consensus       202 --~~~~~~~~d~~gvlvQyP~~~G~i~D~~~~~~~ah~~gal~iv~~D~laL~lLkpPGe~GADIaVGs~Qr-fGvPmgf  278 (955)
T PRK05367        202 --AAEALDHDDVFGVLLQYPGTSGEVRDYRALIAAAHAAGALVAVAADLLALTLLTPPGEMGADIAVGSAQR-FGVPMGF  278 (955)
T ss_pred             --HHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCCCHHHCCCCEEEECCCC-CCCCCCC
T ss_conf             --5656776777999997899888717879999999765978999746667752389666387679731666-6777667


Q ss_pred             ---CCEEEEECHHHHHHHHHC-----CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCHH
Q ss_conf             ---515445677888765411-----4457783123200112321033478644666448899999999-8620103189
Q gi|254780153|r  200 ---GFGIIILSPASVERLEKY-----VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-LWLKKMGGLS  270 (391)
Q Consensus       200 ---Gl~~v~~s~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-~~i~~~gGl~  270 (391)
                         ..+|...+++...++-.+     +.....+ -+.+....+...=++..-|-|-=.-..+.|.-.++ --..--.||.
T Consensus       279 GGPhagffA~~~~~~R~mPGRiVG~S~D~~G~~-ayrlaLQTREQHIRReKATSNICTaQaLLA~mA~~YAvYHGP~GLk  357 (955)
T PRK05367        279 GGPHAAYFATRDAYKRSMPGRIVGVSVDAAGNP-ALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLK  357 (955)
T ss_pred             CCCCEEEEEECCCCCCCCCCCEEEEEECCCCCE-EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf             886537888636641589975340366589697-5553001489998765201011477899999998896300899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf             99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r  271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD  350 (391)
Q Consensus       271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~  350 (391)
                      ++.+|...++..+.+.+++.+ +..  .+..+-  -.+++.++..             ...+.....+.++-+.     .
T Consensus       358 ~IA~rih~~a~~la~~l~~~G-~~v--~~~~fF--DTl~v~~~~~-------------a~~i~~~A~~~giNlr-----~  414 (955)
T PRK05367        358 AIARRVHRLTAILAAGLKALG-FKL--VHDSFF--DTLTVEVGGD-------------AAAILARALAAGINLR-----R  414 (955)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-CCC--CCCCCE--EEEEEECCCC-------------HHHHHHHHHHCCCEEE-----E
T ss_conf             999999999999999999789-844--578710--2799965855-------------9999999997697289-----8


Q ss_pred             C-CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             6-7505686158889999999999999
Q gi|254780153|r  351 A-PLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       351 ~-~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      . .+.+.|+.--..+.+|+..|++.+.
T Consensus       415 ~d~~~v~iSlDEttt~~dl~~l~~~f~  441 (955)
T PRK05367        415 VDDDAVGISLDETTTREDVAALLSVFG  441 (955)
T ss_pred             ECCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf             369969999358799999999999971


No 316
>KOG0256 consensus
Probab=96.86  E-value=0.039  Score=33.00  Aligned_cols=303  Identities=13%  Similarity=0.107  Sum_probs=154.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCE
Q ss_conf             32898899999999999999968--8998579997487348999875320578970799707368888876532387630
Q gi|254780153|r   40 SHRCVLGKERINKAIQLTRKVLE--VPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDV  117 (391)
Q Consensus        40 sHRs~~f~~i~~~~~~~l~~l~~--~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~  117 (391)
                      .|--+.|.+-+.+-++..+.==-  -|+  . +.+++|+|+++|++..=|..||++.++-+-++++ |..+++-+.+.++
T Consensus       120 y~Gl~~frqa~A~Fm~~~r~~~v~fdP~--r-~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~g-fdrdl~~rTgvei  195 (471)
T KOG0256         120 YHGLPSFRQAVAEFMERARGNRVKFDPE--R-VVVTNGATSANETLMFCLADPGDAFLVPTPYYPG-FDRDLRWRTGVEI  195 (471)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCCC--C-EEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCC-CCCCCEEECCCEE
T ss_conf             3475689999999999984898743765--6-6885575316677787625898510356899876-3220142038369


Q ss_pred             EEE--ECCCCCCCCHHHCCCC-----------CCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECC---HHHH
Q ss_conf             674--0577765786767855-----------657997420242022032035-----025686148864011---0110
Q gi|254780153|r  118 REF--TAPYGSLPDFSKVDFD-----------RDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATS---AVFA  176 (391)
Q Consensus       118 ~~~--~~~~g~~~~~~~~~~~-----------~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vS---s~g~  176 (391)
                      .-+  ....|.-.+.+..+.+           +-+.++-=..--|+..+-+..     .+..++.-+|+|-+=   -|+.
T Consensus       196 vpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~  275 (471)
T KOG0256         196 VPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDK  275 (471)
T ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHCCCCC
T ss_conf             99984067884122999999999999818952489982799977774699999999998864562798603210020366


Q ss_pred             CC------------CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCC
Q ss_conf             25------------455685799970012001766515445677888765411445778312320011232103347864
Q gi|254780153|r  177 RH------------IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGET  244 (391)
Q Consensus       177 ~p------------~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (391)
                      -.            ++.+.+.++|+ --|-|| -||+-+-++=-.--+.+             .-...+.     ..+  
T Consensus       276 ~~F~Sv~ev~~~~~~~~~rvHivys-lSKD~G-lpGfRvGviYs~ne~Vv-------------saA~kms-----sf~--  333 (471)
T KOG0256         276 SEFRSVLEVRKDPHLDPDRVHIVYS-LSKDFG-LPGFRVGVIYSNNEDVV-------------SAATKMS-----SFG--  333 (471)
T ss_pred             CCCEEHHHHHHCCCCCCCCEEEEEE-ECCCCC-CCCEEEEEEEECCHHHH-------------HHHHHHH-----HCC--
T ss_conf             6713789875264568772799997-335569-88637899986673899-------------9999875-----036--


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf             46664488999999998620103189999999977999999987479716766882003653178982473101137345
Q gi|254780153|r  245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINS  324 (391)
Q Consensus       245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~  324 (391)
                      .-.+-|..+.+--..=+|+.++ =+....+|-+.+-+.+-+++++.+. .++.     +.....++.--...+.....+.
T Consensus       334 ~vSs~tQ~~la~LLSD~~f~~~-yl~en~~Rl~~rh~~~~~gLk~lgI-~cl~-----s~AGlF~wvDlr~lL~s~tfe~  406 (471)
T KOG0256         334 LVSSQTQYLLASLLSDEEFTRE-YLRENNKRLRIRHRYIVEGLKALGI-PCLK-----SNAGLFCWVDLRKLLTSLTFEG  406 (471)
T ss_pred             CCCHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCC-CEEE-----CCCCEEEEEEHHHHCCCCCHHH
T ss_conf             8758999999998430889999-9999999999999999754876488-4030-----6870699976677457578188


Q ss_pred             HHHHHHHHHHHHHHC-CEEECCCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             678889999988862-82872665--567675056861588899999999999999999
Q gi|254780153|r  325 QKSFCKSMLSFLEKE-EIAYDIGS--YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       325 ~~~~~~~~~~~l~~~-g~~~~~~~--~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      +.    .+-..+..+ ++-+..|.  |...+.=|||= +....++.++-.++-|.....
T Consensus       407 El----~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvc-FAn~~~~t~~~am~Ri~~~~~  460 (471)
T KOG0256         407 EL----ELWERILDNVKLNLSPGSSCHCHEPGWFRVC-FANMSEETLEVAMRRLKQFLD  460 (471)
T ss_pred             HH----HHHHHHHHHHCCCCCCCCCCEECCCCEEEEE-ECCCCHHHHHHHHHHHHHHHH
T ss_conf             99----9999999860632579976243689858998-424887789999999999987


No 317
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase; InterPro: IPR004639   Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin .   The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA.   The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III.   Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) .   This entry represents glutamate-1-semialdehyde (GSA) aminotransferase (5.4.3.8 from EC), which catalyse a transamination reaction to produce 5-aminoaevulinic acid during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme has a high degree of similarity to amino acid transaminases, and is classed as a class III aminotransferase.; GO: 0042286 glutamate-1-semialdehyde 21-aminomutase activity, 0033014 tetrapyrrole biosynthetic process.
Probab=96.75  E-value=0.047  Score=32.44  Aligned_cols=212  Identities=17%  Similarity=0.157  Sum_probs=128.2

Q ss_pred             CCEEEEEEECCC---CEEECCEEE------ECCCCCCEEEEEEC-CHH-----HHCCCCCCCCEEEEECCHHCCCC-CCC
Q ss_conf             657997420242---022032035------02568614886401-101-----10254556857999700120017-665
Q gi|254780153|r  137 RDVVFVWNGTTS---GVCVPDVGF------IPESREGLVICDAT-SAV-----FARHIDFNKLDVVTFSAQKVLGG-EAG  200 (391)
Q Consensus       137 ~~v~~~h~ETst---Gv~~~~~~~------~~~~~~~llivD~v-Ss~-----g~~p~d~~~iDv~~a~sQK~l~~-ppG  200 (391)
                      ..++-+=.|=+-   |+..|..+.      +|..+|.|+|.|=| +.|     |+.++.-=.=|++  .-.|=||| -| 
T Consensus       199 ~~iAgvIvEPv~GNmGvvpP~~eFL~~Lr~lt~e~g~LLI~DEV~TGFRva~~GAQ~yfgV~PDl~--~lGKI~GGGlP-  275 (434)
T TIGR00713       199 EEIAGVIVEPVAGNMGVVPPKKEFLEGLRELTEEYGALLIFDEVITGFRVALGGAQEYFGVEPDLT--TLGKIIGGGLP-  275 (434)
T ss_pred             CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHCCHHHCCHHCCCCCCCE--EECHHHCCCCC-
T ss_conf             834378861202576664885223589999998729577550221012213321501137874103--42332337645-


Q ss_pred             CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHH
Q ss_conf             154456778887654114457783123200112321033478644666448899999999862010-3189999999977
Q gi|254780153|r  201 FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM-GGLSACVERCNAN  279 (391)
Q Consensus       201 l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~-gGl~~~~~r~~~~  279 (391)
                      ++.+.-+++-.|++   .+.+..         +|       -.|.+==|+. +-|-.++|+.++++ |=.+...+..++.
T Consensus       276 ~gA~gGrrEiM~~l---aP~G~v---------YQ-------AGTlsGNPla-m~AG~atLk~~~~~~~~Y~~l~~~~~~L  335 (434)
T TIGR00713       276 VGAFGGRREIMERL---APEGPV---------YQ-------AGTLSGNPLA-MAAGLATLKLLDEEKGVYTELDELAKRL  335 (434)
T ss_pred             CEEECCCHHHHHHH---CCCCCC---------CC-------CCCCCCCHHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             10122675688431---788774---------45-------6435558899-9999999998534888348999999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEE
Q ss_conf             99999998747971676688200365317898-24731011373456788899999888628287266556767505686
Q gi|254780153|r  280 AAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVW  358 (391)
Q Consensus       280 a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg  358 (391)
                      ++-+.+.+++.+.-. -+  -..-|...+-|. .+.+.....-..-+-.....+...+.++|+.+       .+..|=.+
T Consensus       336 ~~g~~e~l~~~gip~-~~--~~~gSMf~~FFtd~~~V~ny~~A~~SD~e~F~~Ff~~mL~~GVyl-------pPS~FEa~  405 (434)
T TIGR00713       336 AEGLSEVLEDKGIPH-TV--NRVGSMFSLFFTDEEEVTNYADAKKSDTELFAKFFHEMLEKGVYL-------PPSQFEAC  405 (434)
T ss_pred             HHHHHHHHHHCCCCE-EE--EECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-------CCCCHHHH
T ss_conf             999999998279858-99--504400456657788987889998861898899999998588878-------98721155


Q ss_pred             -CCCCCCHHHHH----HHHHHHHHHHHH
Q ss_conf             -15888999999----999999999999
Q gi|254780153|r  359 -VGVTVEKEDLL----LLCDWLRWVFYF  381 (391)
Q Consensus       359 -~~g~i~~~dv~----~L~~aLe~~~~~  381 (391)
                       +--+.++|+|+    ..+++++.+|++
T Consensus       406 F~S~AH~~E~i~yaq~~ti~a~~~~f~~  433 (434)
T TIGR00713       406 FISAAHTEEDIEYAQTNTIEAAEEVFAE  433 (434)
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             5167777211789999999999999840


No 318
>TIGR00474 selA L-seryl-tRNA selenium transferase; InterPro: IPR004534 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation.   This family describes SelA. A close homolog of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N-terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pyloriputative SelA.; GO: 0004125 L-seryl-tRNASec selenium transferase activity, 0001514 selenocysteine incorporation, 0005737 cytoplasm.
Probab=96.63  E-value=0.057  Score=31.91  Aligned_cols=300  Identities=15%  Similarity=0.075  Sum_probs=143.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC-----HHHHHHHHHHH
Q ss_conf             3653289889999999999999996889985799974873489998753205789707997073-----68888876532
Q gi|254780153|r   37 LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES-----FGLGWMSDIRQ  111 (391)
Q Consensus        37 l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~-----~~~r~~~~~~~  111 (391)
                      .+++||.....+++.++.       +.. +..|++ . -+..++=+.+  ++..|+.+++.-|.     =..|.-+...+
T Consensus       104 ~gRG~R~~~i~~lLc~lT-------gae-~~cvvn-N-na~avlL~l~--~~a~GKeVi~srGEL~eiGg~fRipdim~~  171 (448)
T TIGR00474       104 GGRGHRDAHIEKLLCKLT-------GAE-DACVVN-N-NAAAVLLMLA--TLAKGKEVIISRGELVEIGGAFRIPDIMKQ  171 (448)
T ss_pred             CCCCHHHHHHHHHHHHHC-------CCC-CCEEEE-C-HHHHHHHHHH--HHCCCCEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf             575317899999987532-------862-330442-3-3899999999--960798799978865789875654488965


Q ss_pred             CCCCCEEEEE-CCCCCCCC-HHHCCCCCCEEE-EEEE--CCCCEEEC--CEE--EECCCCCCEEEEEECCHHH------H
Q ss_conf             3876306740-57776578-676785565799-7420--24202203--203--5025686148864011011------0
Q gi|254780153|r  112 LSLQDVREFT-APYGSLPD-FSKVDFDRDVVF-VWNG--TTSGVCVP--DVG--FIPESREGLVICDATSAVF------A  176 (391)
Q Consensus       112 ~~~~~~~~~~-~~~g~~~~-~~~~~~~~~v~~-~h~E--TstGv~~~--~~~--~~~~~~~~llivD~vSs~g------~  176 (391)
                      .| ...+.+. ..-...-| ...+...++..+ ||.+  ...|-...  +.+  .+.+..++++++|.-|...      +
T Consensus       172 ~g-~~l~eVGttn~t~~~Dy~~ai~~nTa~Lmkvh~sNf~~~gft~~~~eeeLv~LG~~~~~pv~~D~gSG~LvdL~~~g  250 (448)
T TIGR00474       172 AG-CELDEVGTTNRTHVKDYRVAITENTALLMKVHLSNFKIVGFTAKVKEEELVKLGKELDVPVVTDLGSGLLVDLSQYG  250 (448)
T ss_pred             CC-CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHCC
T ss_conf             38-56510110120004467776531034444443016625652111577899973223377079987766212254416


Q ss_pred             CCCC--------CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf             2545--------56857999700120017665154456778887654114457783123200112321033478644666
Q gi|254780153|r  177 RHID--------FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP  248 (391)
Q Consensus       177 ~p~d--------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP  248 (391)
                      .|+|        .-++|.|.+|.-|=|||| --|+++.+++.++++....-.    +-+..++                 
T Consensus       251 L~~~eP~~~~~i~~G~dLVs~SgDKLLgGp-qaGiivGKKeli~ki~~~p~k----r~Lr~dk-----------------  308 (448)
T TIGR00474       251 LPKNEPNVQEAIALGVDLVSFSGDKLLGGP-QAGIIVGKKELIEKIQIHPLK----RALRADK-----------------  308 (448)
T ss_pred             CCCCCCCCCHHHHCCCCEEECCCCCCCCCC-CCCEEECCHHHHHHHHHCCCC----EEHHCCH-----------------
T ss_conf             666889710688669857861651004676-503462307899998547862----2101241-----------------


Q ss_pred             CHHHHHHHHHHHHHHHCC----CCH------HHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             448899999999862010----318------99999999779999999874797--167668820036531789824731
Q gi|254780153|r  249 SLLCIEDYIDALLWLKKM----GGL------SACVERCNANAAVLFQFIQENDW--IENLAVDETTRSNTSICMKIVDSD  316 (391)
Q Consensus       249 ~v~~i~al~~~l~~i~~~----gGl------~~~~~r~~~~a~~l~~~i~~~~~--~~~~~~~~~~rS~~~v~~~~~d~~  316 (391)
                      +  .+.++..+|+-+.+-    +-+      ..-.+.-+.+++.|...+++..+  |..-+......--...-....+|.
T Consensus       309 ~--~LAGle~tLkly~~PEkl~E~ip~lr~ltr~~~~~~~~a~rL~~~L~~~~~~~f~i~i~~~~~~~G~gs~p~~~~pt  386 (448)
T TIGR00474       309 L--TLAGLEATLKLYLNPEKLLEKIPTLRLLTRAKKFLRIKAERLEKELKAIDGAEFNIQIVKERAQIGSGSLPVERLPT  386 (448)
T ss_pred             H--HHHHHHHHHHHHCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf             6--79999999974158024304421556530348899999999888750356882268886205788974365322663


Q ss_pred             CCCCCHHHHH--HHHHHHHHHHHHCCE-EECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHH
Q ss_conf             0113734567--888999998886282-87266556767505686-158889999999999999
Q gi|254780153|r  317 IASLDINSQK--SFCKSMLSFLEKEEI-AYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       317 ~~~~~~~~~~--~~~~~~~~~l~~~g~-~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe  376 (391)
                      .+.....+..  .....+.+++..-.. +++.   +.+-+.-||| .+=.+.-+|...++++|+
T Consensus       387 ~~v~~~~~~~~G~~l~~L~~r~~~~~~pv~Gr---PGa~~~~rl~Ld~R~~~~~D~~~i~~~l~  447 (448)
T TIGR00474       387 IAVTILIEIGSGAKLENLSARYRILTIPVIGR---PGAIKSGRLWLDLRDLERIDDNTILKTLV  447 (448)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             23111111067512799998618567774407---77761242113256788887999999833


No 319
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminase; InterPro: IPR004637 This is a very small family, with two known examples at the time of model creation. This enzyme is a pyridoxal phosphate-containing class III aminotransferase and is quite similar to 4-aminobutyrate aminotransferase (2.6.1.19 from EC). Diaminobutyrate-2-oxoglutarate transaminase (2.6.1.76 from EC) is a homotetramer which catalyses the conversion of L-2,4-diaminobutyrate and 2-oxoglutarate to L-glutamate and L-aspartic 4-semialdehyde during 1,3-diaminopropane biosynthesis.; GO: 0008483 transaminase activity, 0009058 biosynthetic process.
Probab=95.84  E-value=0.15  Score=29.29  Aligned_cols=325  Identities=16%  Similarity=0.135  Sum_probs=167.1

Q ss_pred             HHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHCC--CCCCEEEEECCCCHHHHHHHHH---HCCCCCCEEEEEECC
Q ss_conf             99986321036--5328988999999999999999688--9985799974873489998753---205789707997073
Q gi|254780153|r   28 SLGILEGALLG--RSHRCVLGKERINKAIQLTRKVLEV--PENYRIAIVPASDTGAVEMALW---SLLGYRGVDVLAWES  100 (391)
Q Consensus        28 v~~~~~~~~l~--~sHRs~~f~~i~~~~~~~l~~l~~~--p~~y~v~~l~GsgT~~~ea~~~---nl~~~~~~~~~~~g~  100 (391)
                      +.+++...+=+  .-|-=.--..+=++-.+.|..++--  .++|.+.|.-=||--+.|+++-   ...++..++-..+|.
T Consensus        60 ~~Q~~~~~l~~~~~~H~LDl~T~~K~~F~~~l~~~~~~~r~~~Y~l~F~GP~GA~a~EaA~KLA~~~TGR~~visF~~Gf  139 (445)
T TIGR00709        60 LKQKIKDVLQSGLPLHTLDLTTPLKDAFIEALLNILPKPRKEDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGF  139 (445)
T ss_pred             HHHHHHHHHHHCCCEEEHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             99999999860785543002200027899999997068877631787188898535789999743117870047633885


Q ss_pred             HHHHHHHHHHHCCCC-----------------CEEEEECCCCCCCCHH--H----C----CCC----CCEEEEEEECCCC
Q ss_conf             688888765323876-----------------3067405777657867--6----7----855----6579974202420
Q gi|254780153|r  101 FGLGWMSDIRQLSLQ-----------------DVREFTAPYGSLPDFS--K----V----DFD----RDVVFVWNGTTSG  149 (391)
Q Consensus       101 ~~~r~~~~~~~~~~~-----------------~~~~~~~~~g~~~~~~--~----~----~~~----~~v~~~h~ETstG  149 (391)
                      .|--. .-++-.++.                 ....+..|.|..=...  .    +    +..    ..=+.+=.||..|
T Consensus       140 HGMT~-GaLa~TGN~~~~Na~~~~~~~~~~~PY~~~~~~P~G~GGeaG~~~~~~Y~ENF~~~~~SG~~KPAA~I~E~iQG  218 (445)
T TIGR00709       140 HGMTI-GALALTGNLFAKNAVEMLLPGVQFLPYPHEYRCPLGLGGEAGSNAVIEYFENFIEDVESGVDKPAAVILEAIQG  218 (445)
T ss_pred             CHHHH-HHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC
T ss_conf             10122-13665224200012455677762278842324766677034467899998775413667765760468863307


Q ss_pred             ---EE-EC-----CEEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCC-CCCCEEEEECHHHHH
Q ss_conf             ---22-03-----2035025686148864011011025---4--55685--7999700120017-665154456778887
Q gi|254780153|r  150 ---VC-VP-----DVGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGG-EAGFGIIILSPASVE  212 (391)
Q Consensus       150 ---v~-~~-----~~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~-ppGl~~v~~s~~al~  212 (391)
                         +. -|     ..+.++.++++++|+|-|++=.++-   +  +..+|  |+++.|  |++|| -.=|+++.++++   
T Consensus       219 EGG~~~A~~~wL~~i~~v~~~~~I~lIlD~VQAG~~R~G~~FaFE~AGI~PD~v~~S--KavGGng~PLAv~~i~~~---  293 (445)
T TIGR00709       219 EGGVVAAPVEWLQKIREVTRKHDIKLILDEVQAGFGRSGKMFAFEHAGIEPDVVVLS--KAVGGNGLPLAVLLIKKE---  293 (445)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEE--CCCCCCCHHHHHHHHHHH---
T ss_conf             885102247999999998742784799822345701255511002478986768983--033888506888776343---


Q ss_pred             HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             65411445778312320011232103347864466644889999999986201031899999999779999999874797
Q gi|254780153|r  213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW  292 (391)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~  292 (391)
                                      |+.    ++...+..| |-=+-+.+.--..+|+.++++-=-++..+|.++....|.+-+.+.+ 
T Consensus       294 ----------------fD~----~~Pa~H~GT-FRGN~lA~~TG~~~L~~~kd~~L~~N~QE~~E~~t~~L~~~~K~~P-  351 (445)
T TIGR00709       294 ----------------FDA----WQPAGHTGT-FRGNQLAMVTGLEALNIIKDDNLAQNAQERGERITSFLDDLIKEYP-  351 (445)
T ss_pred             ----------------CCC----CCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf             ----------------045----688986655-4301578888899999888766765554446789999999987378-


Q ss_pred             CCCCCCCCC-CCCCCEEEEEECCC-CCCCC-CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf             167668820-03653178982473-10113-7345678889999988862828726655676750568615888999999
Q gi|254780153|r  293 IENLAVDET-TRSNTSICMKIVDS-DIASL-DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLL  369 (391)
Q Consensus       293 ~~~~~~~~~-~rS~~~v~~~~~d~-~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~  369 (391)
                         ...+-. -|..+.-.-.+.+. ..+.. ....+......+.+++-+++.+...+|-  -+..||+=+--.|+.++++
T Consensus       352 ---~~~~VRkGRGlM~Gi~~~~E~~~~D~~G~~P~D~~LA~~I~~~CF~~~LllE~~G~--~~~V~~ll~p~~I~~~~~~  426 (445)
T TIGR00709       352 ---CIGNVRKGRGLMIGIEIVDERKSKDAIGAYPADSELAAAIQGACFENGLLLEKGGR--EGEVVRLLCPITIDQEELE  426 (445)
T ss_pred             ---CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC--CCCEEEEECCEEECHHHHH
T ss_conf             ---54762056633541321025774222478862148999998632205733430689--9736897066032456689


Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             9999999999999998
Q gi|254780153|r  370 LLCDWLRWVFYFQKIS  385 (391)
Q Consensus       370 ~L~~aLe~~~~~~k~~  385 (391)
                      ..+.-++.+..++-..
T Consensus       427 ~~~~~~~~av~e~~~~  442 (445)
T TIGR00709       427 EVISRLKQAVEEALAE  442 (445)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999999987


No 320
>KOG0629 consensus
Probab=95.81  E-value=0.15  Score=29.21  Aligned_cols=338  Identities=13%  Similarity=0.083  Sum_probs=181.8

Q ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH----HCCC---CCC----EE
Q ss_conf             899998632103653289889999999999999996889985799974873489998753----2057---897----07
Q gi|254780153|r   26 GWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW----SLLG---YRG----VD   94 (391)
Q Consensus        26 ~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~----nl~~---~~~----~~   94 (391)
                      +|.-+.+...+. +.---|-|.-+=.++...++++-+-+..-.=+|-+||++.-|-++..    ++.+   .|-    .+
T Consensus       120 ~wlT~t~Ntn~~-TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~l  198 (510)
T KOG0629         120 EWLTSTANTNMF-TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPL  198 (510)
T ss_pred             HHHHHCCCCCCC-EEEECCEEEEEHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
T ss_conf             999850478863-3884232775269999999998387778886536884067789998887611842443002038857


Q ss_pred             EEEE---CCHHHHHHHHHHHCCCCCEEEEEC-CCCCCCCHHHCCC-------C----CCEEEEEEECCCCEEECCEEE--
Q ss_conf             9970---736888887653238763067405-7776578676785-------5----657997420242022032035--
Q gi|254780153|r   95 VLAW---ESFGLGWMSDIRQLSLQDVREFTA-PYGSLPDFSKVDF-------D----RDVVFVWNGTTSGVCVPDVGF--  157 (391)
Q Consensus        95 ~~~~---g~~~~r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~-------~----~~v~~~h~ETstGv~~~~~~~--  157 (391)
                      ++-+   ..||-+-+......+--++..+.. .-|+. .+++++.       .    -.|..+-..|+.|..-|+..+  
T Consensus       199 ilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm-~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iad  277 (510)
T KOG0629         199 ILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKM-IPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIAD  277 (510)
T ss_pred             EEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC-CHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHH
T ss_conf             8984242012499999985668750688325556865-669999999988854899759982478666424586788999


Q ss_pred             ECCCCCCEEEEEECCHHHH-CC------CC-CCCCEEEEECCHHCCCCCCCCEEEEECHHH-HHHHHHCCCCC----CCC
Q ss_conf             0256861488640110110-25------45-568579997001200176651544567788-87654114457----783
Q gi|254780153|r  158 IPESREGLVICDATSAVFA-RH------ID-FNKLDVVTFSAQKVLGGEAGFGIIILSPAS-VERLEKYVPSW----PLP  224 (391)
Q Consensus       158 ~~~~~~~llivD~vSs~g~-~p------~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a-l~~~~~~~~~~----~~~  224 (391)
                      +|..++.-+=|||.=.=|. ++      +. .+..|-+--..+|-+|.|=--+....+++- ++++.......    ...
T Consensus       278 iC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~  357 (510)
T KOG0629         278 ICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKF  357 (510)
T ss_pred             HHHHCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCE
T ss_conf             98754879995100055512475557640575325741166788645861245799887778876402002443146856


Q ss_pred             CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCC
Q ss_conf             123200112321033478644666448899999999862010318999999997799999998747971676688-2003
Q gi|254780153|r  225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD-ETTR  303 (391)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~-~~~r  303 (391)
                      ...+++.-.+..+..+      --++|-++.+-.    .+-..|.++...++-++++.+++.+...+++..+... ++  
T Consensus       358 YdvS~DTgdK~iQCGR------h~D~FKlWlmwk----aKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe--  425 (510)
T KOG0629         358 YDVSYDTGDKAIQCGR------HVDVFKLWLMWK----AKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE--  425 (510)
T ss_pred             EECCCCCCCCHHHCCC------CCCHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCC--
T ss_conf             5210035630332476------542999999997----3256258999999999999999998726561110137875--


Q ss_pred             CCCEEEEEECCCCCCCCCHHHHH-----HHHHHHHHHHHHCCEEECCCCCCC--CCCEEEEECCC-CCCHHHHHHHHHHH
Q ss_conf             65317898247310113734567-----888999998886282872665567--67505686158-88999999999999
Q gi|254780153|r  304 SNTSICMKIVDSDIASLDINSQK-----SFCKSMLSFLEKEEIAYDIGSYRD--APLGLRVWVGV-TVEKEDLLLLCDWL  375 (391)
Q Consensus       304 S~~~v~~~~~d~~~~~~~~~~~~-----~~~~~~~~~l~~~g~~~~~~~~r~--~~~~~RIg~~g-~i~~~dv~~L~~aL  375 (391)
                       .+|++|-..++.+.......+.     ++.-.+.....+ .+-..++.++.  .+.=||...-+ +++..|++-|++.|
T Consensus       426 -~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~-~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEI  503 (510)
T KOG0629         426 -HVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMK-KGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEI  503 (510)
T ss_pred             -EEEEEECCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHH-CCCEEEEECCCCCCCCHHHEECCCCHHHHHHHHHHHHHH
T ss_conf             -478750458667616864603666777407087999975-454356754355544413112156101146588899999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  376 RWVF  379 (391)
Q Consensus       376 e~~~  379 (391)
                      |..-
T Consensus       504 erlg  507 (510)
T KOG0629         504 ERLG  507 (510)
T ss_pred             HHHC
T ss_conf             8751


No 321
>KOG1358 consensus
Probab=95.41  E-value=0.21  Score=28.29  Aligned_cols=288  Identities=14%  Similarity=0.102  Sum_probs=149.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC-HHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             9999999999996889985799974873489998753205789707997073-688888765323876306740577765
Q gi|254780153|r   49 RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES-FGLGWMSDIRQLSLQDVREFTAPYGSL  127 (391)
Q Consensus        49 i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~-~~~r~~~~~~~~~~~~~~~~~~~~g~~  127 (391)
                      +.-+...+|.+++++++  .++.  +-|-..++.++--+..+||..+...+. |.-...-++.+     .....+.....
T Consensus       140 vHldlE~~iakF~G~E~--aivY--s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSR-----S~i~~Fkhndm  210 (467)
T KOG1358         140 VHLDLEKRIAKFMGTED--AIVY--SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSR-----STISYFKHNDM  210 (467)
T ss_pred             EECCCHHHHHHHHCCCC--EEEE--CCCCCHHHHCCHHHHCCCCEEEEEHHHHHHHHHHHHHHH-----HEEEEECCCCH
T ss_conf             10466778987508864--2663--266300320001231147679986210299887776402-----00378547887


Q ss_pred             CCHHH---------CCCCC--C-EEEEEEE---CCCCEEECCEEEE--CCCCCCEEEEEECCHHHHC---------C--C
Q ss_conf             78676---------78556--5-7997420---2420220320350--2568614886401101102---------5--4
Q gi|254780153|r  128 PDFSK---------VDFDR--D-VVFVWNG---TTSGVCVPDVGFI--PESREGLVICDATSAVFAR---------H--I  179 (391)
Q Consensus       128 ~~~~~---------~~~~~--~-v~~~h~E---TstGv~~~~~~~~--~~~~~~llivD~vSs~g~~---------p--~  179 (391)
                      .+++.         .+..+  . --|.+.|   -.+|-+.|..+++  ..++...+++|-+=|||..         .  +
T Consensus       211 ~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v  290 (467)
T KOG1358         211 EDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGV  290 (467)
T ss_pred             HHHHHHCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf             88997545762223314444541379999764047775035099999876625899983333324303568663246898


Q ss_pred             CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             55685799970012001766515445677888765411445778312320011232103347864466644889999999
Q gi|254780153|r  180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDA  259 (391)
Q Consensus       180 d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~  259 (391)
                      +...+|++.++---+|+.-.  +|+..+.-..+ .+.+....   ..|                -.-+||...- +..++
T Consensus       291 ~~~~iDiv~~sm~~alas~G--gFc~G~~~i~~-hQrLSg~~---Y~f----------------SAslPp~la~-aa~~a  347 (467)
T KOG1358         291 PITDIDIVTASMETALASGG--GFCAGKSFIAD-HQRLSGSG---YCF----------------SASLPPYLAG-AAIKA  347 (467)
T ss_pred             CCCCEEEEEECCCCCCCCCC--CEEECCEEEEE-EEECCCCC---EEE----------------ECCCCHHHHH-HHHHH
T ss_conf             80311256511444431467--54325523675-30015662---565----------------1347555545-67777


Q ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             98620103189999999977999999987479716766882003653178982473101137345678889999988862
Q gi|254780153|r  260 LLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE  339 (391)
Q Consensus       260 l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~  339 (391)
                      ++.++.+.+   +++.-+.++..+.+.+....++.. .  -+.-|++.. ++..++.   ...+.+.+....++...-.+
T Consensus       348 i~i~~~~p~---~~~~L~~k~~~~H~~l~~~s~~~v-~--~~~~SPi~h-l~l~~~~---~s~e~e~~lL~eivd~~i~~  417 (467)
T KOG1358         348 ILIEEWNPE---IVQPLRAKVAKFHAALSSNSGFIV-S--GSPESPIIH-LQLERSY---GSREKEEKLLEEIVDKCIAE  417 (467)
T ss_pred             HHHHHHCCC---HHHHHHCCCCCCCHHHHCCCCEEE-E--CCCCCCEEE-EEECCCC---CCHHHHHHHHHHHHHHHHHH
T ss_conf             777761840---222222025210466604772598-4--686772001-2324555---66677999999999999862


Q ss_pred             CEEECCCCC------CCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             828726655------676750568615888999999999999999
Q gi|254780153|r  340 EIAYDIGSY------RDAPLGLRVWVGVTVEKEDLLLLCDWLRWV  378 (391)
Q Consensus       340 g~~~~~~~~------r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~  378 (391)
                      +..+--..|      ...++++||-+-...++++++++.+.|+.+
T Consensus       418 ~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~  462 (467)
T KOG1358         418 GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEV  462 (467)
T ss_pred             CCEEHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             531003145530334799985799870799999999999999999


No 322
>KOG0259 consensus
Probab=94.82  E-value=0.32  Score=27.21  Aligned_cols=275  Identities=16%  Similarity=0.096  Sum_probs=144.4

Q ss_pred             EEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCC--CCCHHHCC----CCCCEEEEE
Q ss_conf             997487348999875320578970799707368888876532387630674057776--57867678----556579974
Q gi|254780153|r   70 AIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGS--LPDFSKVD----FDRDVVFVW  143 (391)
Q Consensus        70 ~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~----~~~~v~~~h  143 (391)
                      +++++|-+.|.|.++..|..++.-.++--=+|--  ....++..+.++..++.-..+  ..|++.++    +.+...++-
T Consensus       129 V~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~--Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~Aivvi  206 (447)
T KOG0259         129 VVLTSGCSQAIELAISSLANPGANILLPRPGFPL--YDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVI  206 (447)
T ss_pred             EEEECCCHHHHHHHHHHHCCCCCCEECCCCCCCH--HHHHHHHCCCEEEEECCCCCCCCEECHHHHHHHHCCCEEEEEEE
T ss_conf             6995563699999999743899866547999846--88766325843676325676561531688997644670699996


Q ss_pred             E-ECCCCEEECC---EE--EECCCCCCEEEEEEC---CHHHHCCC-CCCCCE----E-EEECCHHCCCCCCCCEE--EEE
Q ss_conf             2-0242022032---03--502568614886401---10110254-556857----9-99700120017665154--456
Q gi|254780153|r  144 N-GTTSGVCVPD---VG--FIPESREGLVICDAT---SAVFARHI-DFNKLD----V-VTFSAQKVLGGEAGFGI--IIL  206 (391)
Q Consensus       144 ~-ETstGv~~~~---~~--~~~~~~~~llivD~v---Ss~g~~p~-d~~~iD----v-~~a~sQK~l~~ppGl~~--v~~  206 (391)
                      | ..-+|-.+..   ..  ..++..+.++|.|-+   .-||+-|+ .+.++.    | ...|--|.+. .||--+  +++
T Consensus       207 NP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~-VPGWRlGWi~~  285 (447)
T KOG0259         207 NPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWI-VPGWRLGWIAL  285 (447)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHCCEEECCCCCCCCHHHCCCCCCEEEECCCCCCCC-CCCCEEEEEEE
T ss_conf             79999865151999999999999849769761112313317997300133056573686154235640-47730346897


Q ss_pred             CHHHHHHHHHCCCCCCCCCHHH-CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             7788876541144577831232-001123210334786446664488999999998620103189999999977999999
Q gi|254780153|r  207 SPASVERLEKYVPSWPLPKIFR-MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQ  285 (391)
Q Consensus       207 s~~al~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~  285 (391)
                      .+          +.+ ....-. .....+      .-+...-|++..=-|+-.-|+.--++ =.++...--+.+++..|+
T Consensus       286 hD----------~~g-vf~~~~~~q~~~~------~~~~~~~p~TiiQ~AlP~IL~kTp~e-fF~k~~~~lk~na~l~y~  347 (447)
T KOG0259         286 HD----------PRG-VFRDTKVVQGIKN------FLDIIPGPATIIQGALPDILEKTPEE-FFDKKLSFLKSNADLCYS  347 (447)
T ss_pred             EC----------CCC-CCCCHHHHHHHHH------HHHCCCCCCHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHH
T ss_conf             56----------665-4244189999999------98545995085987758898748399-999999998762799999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH-HCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf             9874797167668820036531789824731011373456788899999888-628287266556767505686158889
Q gi|254780153|r  286 FIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLE-KEEIAYDIGSYRDAPLGLRVWVGVTVE  364 (391)
Q Consensus       286 ~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~~~~r~~~~~~RIg~~g~i~  364 (391)
                      ++...+.+...+ .|+....+-+  .+.-..+.  +...+-    ++...|. +|++++--|.--..+.-+||...-  +
T Consensus       348 ~Lk~IP~l~cp~-kPeg~mylmv--~l~~s~~~--~~~dD~----dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~--~  416 (447)
T KOG0259         348 RLKDIPCLTCPV-KPEGCMYLMV--KLNLSLFP--DIEDDV----DFCQKLAREESVICLPGQAFGLKNWLRIVITV--E  416 (447)
T ss_pred             HHHCCCCCCCCC-CCCCCEEEEE--CCCHHHHC--CCCCCH----HHHHHHHHHCCEEEECCCCCCCCCEEEEEECC--C
T ss_conf             984598766675-8875158985--26665400--224508----99999863142687251203678848999705--7


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780153|r  365 KEDLLLLCDWLR  376 (391)
Q Consensus       365 ~~dv~~L~~aLe  376 (391)
                      .+.++-..+-|+
T Consensus       417 ~~~leea~~Rik  428 (447)
T KOG0259         417 EEMLEEAFSRIK  428 (447)
T ss_pred             HHHHHHHHHHHH
T ss_conf             378999999999


No 323
>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=94.74  E-value=0.33  Score=27.08  Aligned_cols=166  Identities=17%  Similarity=0.134  Sum_probs=94.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHH-HHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789-70799707368888-876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGW-MSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~-~~~~~~~~~~~~~~~  120 (391)
                      |.-..++.+.+...+-+++++++--.+++++ =+||.=-++.+.+.... ..-+++|-.--++- ++-+...+ ....++
T Consensus        51 sSll~kLTn~l~~d~lr~~G~~s~~~~~vvP-~aTGMsl~~~L~~~~~rp~a~yViw~RiDqKSc~Kai~~AG-l~p~vV  128 (389)
T pfam05889        51 SSVLAKLTNELVKDFLKLLGLREVKNCFVVP-LATGMSLLCMLSWRRKRPKAKYVIWPRIDQKSSIKAAERAG-FEPRLV  128 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC-CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC-CEEEEE
T ss_conf             1899999999999999982974316578950-41047999999998558899789986355522689999769-714887


Q ss_pred             E---CCCCCCCCHHHCCC------CCCEEEEEEECCCCE-EECC----EEEECCCCCCEEEEEEC---CH-HHHCCCC--
Q ss_conf             0---57776578676785------565799742024202-2032----03502568614886401---10-1102545--
Q gi|254780153|r  121 T---APYGSLPDFSKVDF------DRDVVFVWNGTTSGV-CVPD----VGFIPESREGLVICDAT---SA-VFARHID--  180 (391)
Q Consensus       121 ~---~~~g~~~~~~~~~~------~~~v~~~h~ETstGv-~~~~----~~~~~~~~~~llivD~v---Ss-~g~~p~d--  180 (391)
                      +   .+..-..+.+.++.      .+.+..++..||.=. .+|.    .+.+|..++++-||-..   ++ .....++  
T Consensus       129 e~~~~~d~l~Td~~~ie~~i~~~g~~~ilcVlsTTScFaPR~pD~v~~IAklC~~~~IpHvVNnAYGlQ~~~~~~~i~~a  208 (389)
T pfam05889       129 ETVLDGDYLITDVNDVETIIEEKGEEVILAVLSTTSCFAPRSPDNVKEIAKICAEYDVPHLVNGAYGIQSEETIRLIAAA  208 (389)
T ss_pred             EEEECCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
T ss_conf             52522882435899999999983877668998446656999966799999999974997478430366179999999999


Q ss_pred             --CCCCEEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf             --568579997001200176651544567788
Q gi|254780153|r  181 --FNKLDVVTFSAQKVLGGEAGFGIIILSPAS  210 (391)
Q Consensus       181 --~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a  210 (391)
                        .-.+|+++-|.-|||..|-|=++++-+.+-
T Consensus       209 ~r~GRVDa~VQStDKNflVPVGGaIIas~d~~  240 (389)
T pfam05889       209 HECGRVDAVVQSLDKNFIVPVGGAIIAAFDES  240 (389)
T ss_pred             HHCCCCEEEEEECCCCEEEECCCEEEEECCHH
T ss_conf             86388218997068662553487489708889


No 324
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase; InterPro: IPR006233   Cystathionine beta-lyase (alternate name: beta-cystathionase) is one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys .; GO: 0004121 cystathionine beta-lyase activity, 0006520 amino acid metabolic process, 0005737 cytoplasm.
Probab=94.55  E-value=0.37  Score=26.79  Aligned_cols=296  Identities=16%  Similarity=0.176  Sum_probs=174.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHHCCCCC
Q ss_conf             532898899999999999999968899857999748734899987532057897079970736--888887653238763
Q gi|254780153|r   39 RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF--GLGWMSDIRQLSLQD  116 (391)
Q Consensus        39 ~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~--~~r~~~~~~~~~~~~  116 (391)
                      +.-|+-.-..-+++++   .++=|.-   -+.+.+ ||+.|+...++.+++.||.++++...|  -+++...+.++-+.+
T Consensus        49 YG~rGt~T~~ALq~a~---~elEG~a---g~~lyP-sGlAAvT~~~LafvkaGDhvL~vdsaY~PTr~Fcd~vLkr~gv~  121 (389)
T TIGR01324        49 YGIRGTLTTVALQDAL---AELEGAA---GVILYP-SGLAAVTNALLAFVKAGDHVLVVDSAYKPTRRFCDIVLKRLGVE  121 (389)
T ss_pred             CCCCCCCHHHHHHHHH---HHHCCCC---CEEEEC-CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCEE
T ss_conf             1346875388999999---9724777---607624-75578889999887438837986464611589998875363445


Q ss_pred             EEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEE---ECC--CCCCEEEEEECCHHHH--CCCCCCCCEEEEE
Q ss_conf             06740577765786767855657997420242022032035---025--6861488640110110--2545568579997
Q gi|254780153|r  117 VREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGF---IPE--SREGLVICDATSAVFA--RHIDFNKLDVVTF  189 (391)
Q Consensus       117 ~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~---~~~--~~~~llivD~vSs~g~--~p~d~~~iDv~~a  189 (391)
                      ++-++...|..--..-+...+.|.++=.=.|...+.+..+.   .++  .+++++++|=+=+.|-  .|++ .++|+-+-
T Consensus       122 ~~YYDP~igPe~ia~Li~pnTkv~flEaP~S~TfE~qDIPaIakaA~kv~~g~~~miDNTWaagllFkpL~-HgvdiSiq  200 (389)
T TIGR01324       122 VEYYDPKIGPEDIAALIKPNTKVVFLEAPASLTFEVQDIPAIAKAARKVAAGVVVMIDNTWAAGLLFKPLE-HGVDISIQ  200 (389)
T ss_pred             EEEECCCCCHHHHHHHCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCC-CCCCEEEE
T ss_conf             88727886888898740888448998378745103588468999986418982999636302001023001-78636875


Q ss_pred             CCHHCCCCCCC--CEEEEECHHHHHHHH-HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             00120017665--154456778887654-114457783123200112321033478644666448899999999862010
Q gi|254780153|r  190 SAQKVLGGEAG--FGIIILSPASVERLE-KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM  266 (391)
Q Consensus       190 ~sQK~l~~ppG--l~~v~~s~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~  266 (391)
                      +.-|=++|-+=  +|=|..++++|+++. +.  .+      .            -|+.-..-   ..|....-|+     
T Consensus       201 A~TKY~~GHSD~~~Gtv~an~~~w~qL~Ge~--~~------~------------~G~~v~~D---daYt~lRGlR-----  252 (389)
T TIGR01324       201 AATKYLAGHSDVLLGTVAANEDAWEQLLGEA--SY------L------------LGQSVDAD---DAYTVLRGLR-----  252 (389)
T ss_pred             ECCCCCCCCCHHHHHHHHHHHHHHHHHCCHH--HH------H------------CCCCCCCC---HHHHHHHHHH-----
T ss_conf             0335575500245634775578998751202--44------4------------16434753---4888886565-----


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--------------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             31899999999779999999874797167668820--------------0365317898247310113734567888999
Q gi|254780153|r  267 GGLSACVERCNANAAVLFQFIQENDWIENLAVDET--------------TRSNTSICMKIVDSDIASLDINSQKSFCKSM  332 (391)
Q Consensus       267 gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~--------------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~  332 (391)
                       .+.-|.+||++++=.+-.||+.-+...-. -.|.              .=|.....+.+..+        --.+..+.+
T Consensus       253 -TlgvRL~~Hqes~laiA~WL~eqpeVarV-lHPALPs~pgH~~wkRDF~GssGlFs~vLt~~--------~~~k~vhaF  322 (389)
T TIGR01324       253 -TLGVRLKRHQESALAIAKWLEEQPEVARV-LHPALPSDPGHELWKRDFSGSSGLFSVVLTKR--------LSQKEVHAF  322 (389)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHCCCCCCCEE-ECCCCCCCCCCCCCCCCCCCCCCCCEEEECCC--------CCHHHHHHH
T ss_conf             -66432577666689999864379965555-57786228873322112255654410237479--------886789999


Q ss_pred             HHHHHHCCEEECCCCCCCCC-----C--E-EEEECCCCC---------CHHHHHHHHHHHHHHHH
Q ss_conf             99888628287266556767-----5--0-568615888---------99999999999999999
Q gi|254780153|r  333 LSFLEKEEIAYDIGSYRDAP-----L--G-LRVWVGVTV---------EKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       333 ~~~l~~~g~~~~~~~~r~~~-----~--~-~RIg~~g~i---------~~~dv~~L~~aLe~~~~  380 (391)
                      ...|.-.+..|..|||=+.-     .  + +|...=+..         =.||||.|..=|.-.|+
T Consensus       323 lD~l~lFglgySWGGyESLal~~~p~e~~h~r~~ik~~leGpLiR~hIGlE~vddLkADl~~Gfe  387 (389)
T TIGR01324       323 LDALKLFGLGYSWGGYESLALNVDPEELAHIRRSIKRDLEGPLIRLHIGLEDVDDLKADLKAGFE  387 (389)
T ss_pred             HHHHHHHHHHCCCCCHHHEEEECCHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf             87888876211300010101207866640001227778987667897066875789999998774


No 325
>KOG2040 consensus
Probab=93.96  E-value=0.49  Score=26.02  Aligned_cols=283  Identities=16%  Similarity=0.121  Sum_probs=127.0

Q ss_pred             HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC
Q ss_conf             999996889985799974873489998753205-7897079970736888887653238763067405777657867678
Q gi|254780153|r   56 LTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD  134 (391)
Q Consensus        56 ~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  134 (391)
                      .+..+-+.|-..--+ + --||.+=||+.+..- .++.+.++...-.-+-..-.-.+..+..+.+.      ..+..+.+
T Consensus       171 mi~dlTGL~~aNASL-L-DEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~------~~~~~~~~  242 (1001)
T KOG2040         171 MITDLTGLPMANASL-L-DEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVV------VSDIKEAD  242 (1001)
T ss_pred             HHHHCCCCCCCCHHH-H-CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCEEEE------ECCHHHHH
T ss_conf             766502886554233-2-131258999999876322642886587783332465203666533688------44778720


Q ss_pred             C-CCCE--EEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCC----CCCCCEEEEECCHHCCCCCCCCE---
Q ss_conf             5-5657--997420242022032035--0256861488640110110254----55685799970012001766515---
Q gi|254780153|r  135 F-DRDV--VFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHI----DFNKLDVVTFSAQKVLGGEAGFG---  202 (391)
Q Consensus       135 ~-~~~v--~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~----d~~~iDv~~a~sQK~l~~ppGl~---  202 (391)
                      . .++|  .+++--...|-..+-.+.  .++..+.+  |=+.+++.+.-+    -.++.|+.+.+||. ||.|=|.+   
T Consensus       243 ~s~~~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~--vv~atDLLaLtiLrpPgefGaDIavGSsQR-FGVPlGYGGPH  319 (1001)
T KOG2040         243 YSSKDVSGVLVQYPDTEGSVLDFDELVELAHANGSL--VVMATDLLALTILRPPGEFGADIAVGSSQR-FGVPLGYGGPH  319 (1001)
T ss_pred             CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCE--EEEEHHHHHHHCCCCHHHCCCEEEECCCCC-CCCCCCCCCCH
T ss_conf             233552169997588777607889999976306855--898402568870278233284146414321-37655678840


Q ss_pred             --EEEECHHHHHHHHHC----CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH----HHHHHHCCCCHHHH
Q ss_conf             --445677888765411----44577831232001123210334786446664488999999----99862010318999
Q gi|254780153|r  203 --IIILSPASVERLEKY----VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYID----ALLWLKKMGGLSAC  272 (391)
Q Consensus       203 --~v~~s~~al~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~----~l~~i~~~gGl~~~  272 (391)
                        |..+++.....+...    .....--.-+.+...... +..++.  -.|-++-.--+|..    .--.+.--.|++++
T Consensus       320 AaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTRE-QHIrRD--KATSNICTAQALLANmaAmyaiYHGp~gL~~I  396 (1001)
T KOG2040         320 AAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTRE-QHIRRD--KATSNICTAQALLANMAAMYAIYHGPHGLKEI  396 (1001)
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH-HHHHHH--CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf             889999999974389735755305666688999888899-887632--01001467999998778777543083789999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC
Q ss_conf             99999779999999874797167668820036531789824731011373456788899999888628287266556767
Q gi|254780153|r  273 VERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP  352 (391)
Q Consensus       273 ~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~  352 (391)
                      .+|.......+-.++++.+ .+ ++ ++.+--  ...+++...             .+++..+-.++.+-+     |.+.
T Consensus       397 Arrvh~~T~~l~~~l~~ag-he-l~-~k~fFD--TLkI~~~~s-------------~~~~l~rA~~~~iNl-----r~~e  453 (1001)
T KOG2040         397 ARRVHNLTLILAEGLKNAG-HE-LQ-HKPFFD--TLKIRCGCS-------------AEEVLDRAAKRQINL-----RLVE  453 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHCC-HH-HC-CCCCCC--EEEEEECCC-------------HHHHHHHHHHHCCCE-----EEEE
T ss_conf             9998889999999876336-23-30-455300--379883685-------------999999998623665-----9960


Q ss_pred             C-EEEEECCCCCCHHHHHHHHHHH
Q ss_conf             5-0568615888999999999999
Q gi|254780153|r  353 L-GLRVWVGVTVEKEDLLLLCDWL  375 (391)
Q Consensus       353 ~-~~RIg~~g~i~~~dv~~L~~aL  375 (391)
                      . .+-++.=-+++.+||+.|+...
T Consensus       454 d~tigvslDETv~~~DvddLl~vf  477 (1001)
T KOG2040         454 DGTIGVSLDETVTEKDVDDLLWVF  477 (1001)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf             684368604435387799999997


No 326
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase; InterPro: IPR011821   Proteins in this entry are important in the interconversion of the sulphur-containing amino acids L-cysteine and L-methionine in bacteria. In bacteria, inorganic sulphur is reduced to sulphide, which is then used to displace the acetyl group of O-acetyl-L-serine to form the essential amino acid L-cysteine. Biosynthesis of L-methionine then occurs via the transsulphuration pathway which involves the sequential action of two pyridoxal 5'-phosphate (PLP) enzymes, cystathionine gamma-synthase (CGS) and cystathionine beta-lyase (CBL). Firstly CGS catalyses the formation of the intermediate cystathione from a homoserine ester and L-cysteine. This intermediate is then converted by CBL to L-homoserine, which is subsequently methylated by methionine synthase to form L-methionine. For more information see .   The CGS enzyme (P00935 from SWISSPROT) from Escherichia coli is, like other CGS enzymes, a homotetramer composed of two catalytically active dimers . The active site of each dimer is found at the interface between the monomers and involves residues from each monomer. Catalysis occurs by alpha,gamma-elimination/replacement reactions..
Probab=92.87  E-value=0.73  Score=24.91  Aligned_cols=286  Identities=18%  Similarity=0.187  Sum_probs=164.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE---EECCHHHHHHHHHHHCCCC
Q ss_conf             5328988999999999999999688998579997487348999875320578970799---7073688888765323876
Q gi|254780153|r   39 RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL---AWESFGLGWMSDIRQLSLQ  115 (391)
Q Consensus        39 ~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~---~~g~~~~r~~~~~~~~~~~  115 (391)
                      +|=|+.+-.+|++++...|-   +- +  . .++|.||+.|+.-+..-+++++|.++.   .+|+ +.|..+-.++.+..
T Consensus        45 YsRsGNPTRd~l~~aLA~LE---~G-~--~-AVvT~~GMsAI~L~~~~lL~pdDLlvAPHDCYGG-tYRLl~~lA~kG~~  116 (383)
T TIGR02080        45 YSRSGNPTRDILQQALAELE---GG-A--G-AVVTNSGMSAIDLVTTALLGPDDLLVAPHDCYGG-TYRLLNALAKKGQF  116 (383)
T ss_pred             CCCCCCCCHHHHHHHHHHHH---CC-C--C-CEECCCHHHHHHHHHHHEECCCCEEEECCCCCCC-HHHHHHHHHHCCCE
T ss_conf             68898975658999999984---89-9--8-2566856898876643120789768804326770-48888645207833


Q ss_pred             CEEEEECCCCCCCCHHHCC---CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEEC--CHHHHCCCCCCCCE
Q ss_conf             3067405777657867678---55657997420242022032035-----02568614886401--10110254556857
Q gi|254780153|r  116 DVREFTAPYGSLPDFSKVD---FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDAT--SAVFARHIDFNKLD  185 (391)
Q Consensus       116 ~~~~~~~~~g~~~~~~~~~---~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~v--Ss~g~~p~d~~~iD  185 (391)
                      .+..++=.     |.....   ..++..+|..||-+==+..+..+     +++..|.+++||=|  |=+.-.|+. =+.|
T Consensus       117 ~v~fVDQ~-----D~~al~~ALa~kdPKLVlIEtPSNPLlRVVDI~~lc~La~~~G~~vvVDNTFLsP~lQ~PL~-LGAD  190 (383)
T TIGR02080       117 KVQFVDQS-----DEQALEAALAQKDPKLVLIETPSNPLLRVVDIAKLCKLAKAVGAVVVVDNTFLSPILQQPLS-LGAD  190 (383)
T ss_pred             EEEEEECC-----HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCC-HHCC
T ss_conf             89986076-----28999999974698479986799885218889999988761883899855216776727530-1111


Q ss_pred             EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999700120017665--154456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r  186 VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL  263 (391)
Q Consensus       186 v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i  263 (391)
                      .++=|.-|=|-|-+=  .|.||.++.-                  ......+|.|.. |.   |-.-|-=|.+   |+=|
T Consensus       191 ~V~HS~TKYlNGHSDVi~GaVIaKd~q------------------~~e~L~WW~N~l-G~---tG~aFDSY~t---LRGl  245 (383)
T TIGR02080       191 LVIHSTTKYLNGHSDVIAGAVIAKDPQ------------------LAEELAWWANAL-GV---TGGAFDSYLT---LRGL  245 (383)
T ss_pred             EEHHHHHCCCCCCHHHHHHHHHCCCHH------------------HHHHHHHHHHCC-CC---CCCHHHHHHH---HHHH
T ss_conf             301111100034034312124014712------------------234433343002-55---4443468899---8678


Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-------------CC-CCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             010318999999997799999998747971676688200-------------36-5317898247310113734567888
Q gi|254780153|r  264 KKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT-------------RS-NTSICMKIVDSDIASLDINSQKSFC  329 (391)
Q Consensus       264 ~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~-------------rS-~~~v~~~~~d~~~~~~~~~~~~~~~  329 (391)
                      +   .|..|...++++++.+-+++++.+..+... .|.-             ++ -....|.++...      ..-.+|.
T Consensus       246 R---TL~~Rm~~~qrnA~~Iv~yL~~~P~V~k~Y-yPgLpdH~GH~IA~~QQ~GFGAmlSFEL~G~~------~~v~~FL  315 (383)
T TIGR02080       246 R---TLAARMRSQQRNAQTIVEYLQTQPLVKKVY-YPGLPDHPGHEIAARQQKGFGAMLSFELKGGE------EAVRRFL  315 (383)
T ss_pred             H---HHHHHHHHHHHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------HHHHHHH
T ss_conf             8---888888888788999999984489402633-58788866769998625654330233321886------8999998


Q ss_pred             HHHHHHHHHCCEEECCCC------------CCC--------CC--CE-EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             999998886282872665------------567--------67--50-568615888999999999999999999
Q gi|254780153|r  330 KSMLSFLEKEEIAYDIGS------------YRD--------AP--LG-LRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       330 ~~~~~~l~~~g~~~~~~~------------~r~--------~~--~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                      +.+.-+-    .+=.+||            |+.        +|  .. +|+|+|    .||.+-|++=||.+|..
T Consensus       316 ~~L~LFt----LAESLGGVESLiaHPATMTH~aM~~eAR~~AGI~~~LLRlSvG----lED~~DLiaDL~~gl~a  382 (383)
T TIGR02080       316 GKLSLFT----LAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVG----LEDADDLIADLDQGLQA  382 (383)
T ss_pred             HHCCCHH----HHHHHCCHHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCEEEEE----ECCHHHHHHHHHHHHHC
T ss_conf             4314012----1233155123333010126021018989745841142000210----03468899999999741


No 327
>pfam06838 Alum_res Aluminium resistance protein. This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria.
Probab=92.50  E-value=0.81  Score=24.60  Aligned_cols=260  Identities=15%  Similarity=0.081  Sum_probs=136.1

Q ss_pred             HHHHHHHHHCCCCCCCC--------HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             99998632103653289--------8899999999999999968899857999748734899987532057897079970
Q gi|254780153|r   27 WSLGILEGALLGRSHRC--------VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAW   98 (391)
Q Consensus        27 ~v~~~~~~~~l~~sHRs--------~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~   98 (391)
                      .||++++..-++-+|-.        ..=.+.++++-   .++|++.+. -|-.---|||-+...+++.+++|||.++.++
T Consensus        29 KVL~Af~~~~vs~~hf~~sTGYGy~D~GRd~Le~vy---A~vfgaE~A-LVR~q~vSGTHAi~~aLfg~LrPGD~ll~it  104 (405)
T pfam06838        29 KVLNAFQEHRVSDSHFTGSTGYGYDDIGRDTLERVY---ARVFGAEAA-LVRPQFVSGTHAIATALFGVLRPGDELLYIT  104 (405)
T ss_pred             HHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHH---HHHHCCHHH-HCCCCCCCHHHHHHHHHHHCCCCCCEEEECC
T ss_conf             999999980977766688887787764689999999---999673776-5034325528999999983678998787448


Q ss_pred             CCHHHHHHHHHHHCCC---------CCEEEEECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC----E---EEE--
Q ss_conf             7368888876532387---------630674057776578676785--5657997420242022032----0---350--
Q gi|254780153|r   99 ESFGLGWMSDIRQLSL---------QDVREFTAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD----V---GFI--  158 (391)
Q Consensus        99 g~~~~r~~~~~~~~~~---------~~~~~~~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~----~---~~~--  158 (391)
                      |.=..-.-+.+-..+.         .....+.-...-.+|.+.+..  ....-+++.--|.|-....    .   +.+  
T Consensus       105 G~PYDTL~eVIGi~g~~~GSL~e~Gv~Y~~v~L~~~g~~D~~~i~~ai~~~tk~v~IQRS~GYs~R~slsi~~I~~~i~~  184 (405)
T pfam06838       105 GKPYDTLEEVIGIRGEGQGSLKDFGIGYREVPLLENGKVDWQAVKTAITPNTKLIGIQRSKGYAWRPSLTIAEIKEMIKF  184 (405)
T ss_pred             CCCCHHHHHHHCCCCCCCCCHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf             99736589871858899888899596603643577898499999976175645999962568666888799999999999


Q ss_pred             --CCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCC--CCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHH
Q ss_conf             --256861488640110110254556--857999700120017--66515445677888765411445778312320011
Q gi|254780153|r  159 --PESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGG--EAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKG  232 (391)
Q Consensus       159 --~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~--ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~  232 (391)
                        ....++++.||-.=.=..+.....  +.|++..|-=||.||  .|.=+.++-++++.|++...-....+-        
T Consensus       185 vk~~~pd~ivfVDNCYGEFvE~~EP~~vGADliaGSLIKNpGGgiaptGGYIaGk~dlVe~aa~RLTaPGiG--------  256 (405)
T pfam06838       185 VKEINPNVIVFVDNCYGEFVETKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKEELVEQASYRLTAPGIG--------  256 (405)
T ss_pred             HHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHEECCCEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCC--------
T ss_conf             997689939999788602026758530163440120124799773675777853699999987520688346--------


Q ss_pred             HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             23210334786446664488999999998620103189999999977999999987479716766882003653178982
Q gi|254780153|r  233 GRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI  312 (391)
Q Consensus       233 ~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~  312 (391)
                            .+-|.++++     ...+-+.|  +.+    .++....-+-+-..-..++++ ++...+.-.+.|+-.+.++.+
T Consensus       257 ------~e~Gat~~~-----~r~~~QGl--FlA----P~vv~eAlKga~~~A~~~e~l-G~~v~P~~~~~R~DiIQav~l  318 (405)
T pfam06838       257 ------REGGATLGS-----LREMYQGL--FLA----PHVVGEALKGAHFTARVLELL-GFPVLPKYNEKRTDLIQAVKF  318 (405)
T ss_pred             ------CCCCCCCCH-----HHHHHHHH--CCC----HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCEEEEEEC
T ss_conf             ------545768137-----89998786--002----499999999999999999984-994689999987745788867


Q ss_pred             CCCC
Q ss_conf             4731
Q gi|254780153|r  313 VDSD  316 (391)
Q Consensus       313 ~d~~  316 (391)
                      .+++
T Consensus       319 ~~~e  322 (405)
T pfam06838       319 GDKE  322 (405)
T ss_pred             CCHH
T ss_conf             9989


No 328
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=92.06  E-value=0.92  Score=24.26  Aligned_cols=258  Identities=17%  Similarity=0.152  Sum_probs=135.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH-HHHHHHHHHHCCCCCEEEEE
Q ss_conf             98899999999999999968899857999748734899987532057897079970736-88888765323876306740
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF-GLGWMSDIRQLSLQDVREFT  121 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~-~~r~~~~~~~~~~~~~~~~~  121 (391)
                      ..-|.+   ++++.=++.|+-+ .+.++...-. |.+.-|+++.|..++..++-+--.- +.-.....++.-+       
T Consensus        52 paif~e---k~~~~g~~HlgG~-~e~~v~~NRT-SsailAtIlaL~~~~~~Vvh~vPe~paHPSI~rsc~lag-------  119 (346)
T TIGR03576        52 PAIFEE---KVQELGREHLGGP-EEKILVFNRT-SSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAG-------  119 (346)
T ss_pred             CHHHHH---HHHHHHHHHCCCC-CCEEEEECCC-HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECC-------
T ss_conf             087699---9999999873998-3257774562-699999999835788705897878789997302005148-------


Q ss_pred             CCCCCCCCHHHCCCCC--CEEEEEEECCCCEEECCEE---E--ECCCCCCEEEEEECCHHHH-----CCCC-CCCCEEEE
Q ss_conf             5777657867678556--5799742024202203203---5--0256861488640110110-----2545-56857999
Q gi|254780153|r  122 APYGSLPDFSKVDFDR--DVVFVWNGTTSGVCVPDVG---F--IPESREGLVICDATSAVFA-----RHID-FNKLDVVT  188 (391)
Q Consensus       122 ~~~g~~~~~~~~~~~~--~v~~~h~ETstGv~~~~~~---~--~~~~~~~llivD~vSs~g~-----~p~d-~~~iDv~~  188 (391)
                      .++-+..+++++....  .+.++.-.|.+.-..+...   +  .++++++++++|=.|..--     .|-. .-+.|.++
T Consensus       120 aey~E~d~~~el~~~d~~slvviTgstmd~~vi~~d~~k~vI~~Ak~~~a~V~vDDAsGARvR~L~gq~~al~lGADLvV  199 (346)
T TIGR03576       120 AEYFESDELSELKKIDGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVV  199 (346)
T ss_pred             CCEEECCCHHHHCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCEEE
T ss_conf             71475066776276788718999378777300457889999999874698499854888751665199986555642688


Q ss_pred             ECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             70012001766515445677888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r  189 FSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG  268 (391)
Q Consensus       189 a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG  268 (391)
                      +|.-|-|.|| =.|+++.+++.+++....              ..++      |..-. ||  .+.++-.+|+.+.-+ -
T Consensus       200 TS~DKlM~GP-R~GlLaG~~eLV~ki~~~--------------~~~~------GlEaq-~P--i~aAmv~aLe~f~~~-~  254 (346)
T TIGR03576       200 TSTDKLMDGP-RGGLLAGRKELVDKIKSV--------------GEQF------GLEAQ-AP--LLAAVVRALEEFELS-R  254 (346)
T ss_pred             EEHHHCCCCC-CCCEECCCHHHHHHHHHH--------------HHHC------CCCCC-CC--HHHHHHHHHHCCCHH-H
T ss_conf             4002126677-541122888999999999--------------8752------77778-41--599999999707999-9


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE-CCCC
Q ss_conf             899999999779999999874797167668820036531789824731011373456788899999888628287-2665
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAY-DIGS  347 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~  347 (391)
                      +...++|.++    +|...-  ..+.      -.+.++-..+  ....        ..+.+.-...+|.+.|++- -..|
T Consensus       255 l~~a~~r~~~----~~l~~~--~~l~------~e~TptGf~i--k~~~--------~e~~~~~~~~LL~~ygIiTIta~G  312 (346)
T TIGR03576       255 IRDAFKRKEE----VYLRLF--DKLN------VERTPTGFVI--KGVE--------EEKLIEIGLDLLRNYGIITITAVG  312 (346)
T ss_pred             HHHHHHHHHH----HHHHHH--HCCC------CCCCCCEEEE--ECCC--------HHHHHHHHHHHHHHCCEEEEECCC
T ss_conf             9999999999----887653--0357------4327853798--5656--------888899999999976948983477


Q ss_pred             CCCCCCEEEEEC
Q ss_conf             567675056861
Q gi|254780153|r  348 YRDAPLGLRVWV  359 (391)
Q Consensus       348 ~r~~~~~~RIg~  359 (391)
                      +..+-+++|+-.
T Consensus       313 mpgasktlR~d~  324 (346)
T TIGR03576       313 MPGASKTLRFDL  324 (346)
T ss_pred             CCCCCCEEEEEE
T ss_conf             888763268762


No 329
>KOG1383 consensus
Probab=90.65  E-value=1.3  Score=23.36  Aligned_cols=303  Identities=13%  Similarity=0.049  Sum_probs=162.7

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH---HCCCC--C-CEEEEEECCHHHHHHHHHHHCCCCCE
Q ss_conf             889999999999999996889985799974873489998753---20578--9-70799707368888876532387630
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW---SLLGY--R-GVDVLAWESFGLGWMSDIRQLSLQDV  117 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~---nl~~~--~-~~~~~~~g~~~~r~~~~~~~~~~~~~  117 (391)
                      |--.++-+++.+.+..+|+.|++ .+=-.+-|||.+..++..   |....  + +.--++.+.-.+-..+.++++-....
T Consensus       116 p~~~~~e~~~Vnm~~~L~~~~~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~i~~p~iv~~~~v~~a~eK~a~yf~v~l  194 (491)
T KOG1383         116 PVVRKLEAECVNMIANLFNAPSD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL  194 (491)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEE
T ss_conf             33589999999999998469964-56755446516888898999999974059887100215889999999876679999


Q ss_pred             EEEECCCC-CCCCHHHCCC--CCCEEE--E-EEECCCCEEECCEEE--EC-CCCCCEEEEEECCHHHHCC--------CC
Q ss_conf             67405777-6578676785--565799--7-420242022032035--02-5686148864011011025--------45
Q gi|254780153|r  118 REFTAPYG-SLPDFSKVDF--DRDVVF--V-WNGTTSGVCVPDVGF--IP-ESREGLVICDATSAVFARH--------ID  180 (391)
Q Consensus       118 ~~~~~~~g-~~~~~~~~~~--~~~v~~--~-h~ETstGv~~~~~~~--~~-~~~~~llivD~vSs~g~~p--------~d  180 (391)
                      ..+....+ ...|+.....  +....+  . --.|-+|..-++...  +. ...+.++=||+.+.=.-.|        +|
T Consensus       195 ~~V~~~~~~~~~D~~k~~~~i~eNti~lV~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fd  274 (491)
T KOG1383         195 REVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFD  274 (491)
T ss_pred             EEEECCCCCEEECHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCC
T ss_conf             76503632257629999987534637999975888767301599999999987277504201676621013245754566


Q ss_pred             CCCCEE--EEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC------CHHH
Q ss_conf             568579--99700120017665154456778887654114457783123200112321033478644666------4488
Q gi|254780153|r  181 FNKLDV--VTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP------SLLC  252 (391)
Q Consensus       181 ~~~iDv--~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP------~v~~  252 (391)
                      +..-.+  +-+..+|==-.|+|++.|+-+.+-+.      ...++ .-.+|.           |..+.||      |-+.
T Consensus       275 Fr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~l------~~q~~-~~~~w~-----------Gg~y~s~TlngSR~g~~  336 (491)
T KOG1383         275 FRVPGVTSISADGHKYGLAPAGSSWVLYRNKELL------PHQLF-FHTDWL-----------GGIYASPTLNGSRPGSQ  336 (491)
T ss_pred             CCCCCEEEEEECCCEEEEECCCCEEEEECCCCCC------CCEEE-EECCCC-----------CCCCCCCCCCCCCCCCH
T ss_conf             6888811487235300013078579998566666------54389-842546-----------76556752125785128


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             99999999862010318999999997799999998747971676688200365317898247310113734567888999
Q gi|254780153|r  253 IEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSM  332 (391)
Q Consensus       253 i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~  332 (391)
                      +.+.-.+|-.+= +.|-.+..+++.+.++.+++++++.+.+..+-       .-.++|..-+....+         +..+
T Consensus       337 va~~wa~~~~lG-~eGY~~~~~~ive~~~~l~egie~i~~i~i~g-------kp~vs~~~~~s~~~~---------i~el  399 (491)
T KOG1383         337 VAAQWAALMSLG-EEGYRENTQNIVETARKLREGIENIKGIKIVG-------KPLVSFILFGSNDVN---------IFEL  399 (491)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC-------CCCEEEEECCCCCCC---------CEEH
T ss_conf             999999999861-78899999999999999998654355613327-------873799971687653---------1114


Q ss_pred             HHHHHHCCEEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99888628287266556767505686-158889999999999999999999998
Q gi|254780153|r  333 LSFLEKEEIAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       333 ~~~l~~~g~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      ...+.+.|..+  +.|+ .+.++-|- +...+.++=.++|+.-|+-+..+.|..
T Consensus       400 sd~l~~~GW~l--nalq-~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~  450 (491)
T KOG1383         400 SDLLRKKGWIL--NALQ-FPAAIHICVTRVHAREDVADRFVADIRKVVEELKSL  450 (491)
T ss_pred             HHHHHHCCCCC--CCCC-CCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             57898638676--6567-887216898864135888999999999999999848


No 330
>KOG1411 consensus
Probab=90.12  E-value=1.4  Score=23.07  Aligned_cols=260  Identities=13%  Similarity=0.145  Sum_probs=137.6

Q ss_pred             EECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHH----HCCCC--CCEEEE
Q ss_conf             974873489998753205789707997073688888765323876306740--5777657867----67855--657997
Q gi|254780153|r   71 IVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFS----KVDFD--RDVVFV  142 (391)
Q Consensus        71 ~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~----~~~~~--~~v~~~  142 (391)
                      -++|.|....-|...-..-++..+++-.-.||+.  ..+-+..+..+..+.  .+.....+.+    ++...  ....++
T Consensus       126 ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh--~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilL  203 (427)
T KOG1411         126 TLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNH--KNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILL  203 (427)
T ss_pred             ECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCC--CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEE
T ss_conf             4057532667789998626666156158753456--76300258612566630541001356778998741788848985


Q ss_pred             E--EECCCCEEECCE--EEE---CCCCCCEEEEEEC-CHHHHCCCCC----------CCCEEEEE-CCHHCCCCC----C
Q ss_conf             4--202420220320--350---2568614886401-1011025455----------68579997-001200176----6
Q gi|254780153|r  143 W--NGTTSGVCVPDV--GFI---PESREGLVICDAT-SAVFARHIDF----------NKLDVVTF-SAQKVLGGE----A  199 (391)
Q Consensus       143 h--~ETstGv~~~~~--~~~---~~~~~~llivD~v-Ss~g~~p~d~----------~~iDv~~a-~sQK~l~~p----p  199 (391)
                      |  .+.-|||.-..+  +.+   -..++.+-++|+. ++|.+-.+|.          ++.+++++ |--||||+-    .
T Consensus       204 haCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvG  283 (427)
T KOG1411         204 HACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVG  283 (427)
T ss_pred             EHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHCCC
T ss_conf             22103887889608889999987654035614665540423587024578999998707756765556552320332035


Q ss_pred             CCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHCCCCHHHH
Q ss_conf             5154456778887654114457783123200112321033478644666448899999999-------862010318999
Q gi|254780153|r  200 GFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-------LWLKKMGGLSAC  272 (391)
Q Consensus       200 Gl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-------~~i~~~gGl~~~  272 (391)
                      -+++|+-+.+.-.|.+.-         +...          -.-++.+||+++-......|       .|..   -++.|
T Consensus       284 a~svvc~~ad~A~rV~SQ---------lk~l----------iRpmYSnPP~hGArIv~~Il~d~~l~~~W~~---evk~M  341 (427)
T KOG1411         284 ALSVVCKDADEAKRVESQ---------LKIL----------IRPMYSNPPLHGARIVATILSDPDLKNQWLG---EVKGM  341 (427)
T ss_pred             EEEEEECCHHHHHHHHHH---------HHHH----------HCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH---HHHHH
T ss_conf             057872678888878877---------8888----------6011358986511455540477677778888---89998


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf             9999977999999987479716766882003653--17898247310113734567888999998886282872665567
Q gi|254780153|r  273 VERCNANAAVLFQFIQENDWIENLAVDETTRSNT--SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD  350 (391)
Q Consensus       273 ~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~--~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~  350 (391)
                      ..|.....+.+++.+++.+.-.    +-.+-...  -.||..-.|               +-+..+.+|--++-++    
T Consensus       342 adRi~~mR~~L~d~L~~~gs~~----~W~hI~~QIGMF~fTgl~p---------------eQv~~l~ke~~iYmT~----  398 (427)
T KOG1411         342 ADRIISMRQQLFDALEKEGSPG----NWSHITKQIGMFCFTGLNP---------------EQVDWLTKEYHIYLTK----  398 (427)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCC----CHHHHHHHHHEEEECCCCH---------------HHHHHHHHHHEEEECC----
T ss_conf             7766556888767763579876----6799997620033247899---------------9999987652366525----


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             6750568615888999999999999999999
Q gi|254780153|r  351 APLGLRVWVGVTVEKEDLLLLCDWLRWVFYF  381 (391)
Q Consensus       351 ~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~  381 (391)
                         --|||+-| ++..+|..|.++|..+.+.
T Consensus       399 ---dGRiS~aG-~ss~nV~yLa~aih~vtk~  425 (427)
T KOG1411         399 ---DGRISMAG-LSSSNVPYLADAIHAVTKN  425 (427)
T ss_pred             ---CCEEEECC-CCCCCCCCCCHHHHHHHCC
T ss_conf             ---86376234-5656775411106767437


No 331
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=90.01  E-value=1.4  Score=23.02  Aligned_cols=165  Identities=18%  Similarity=0.168  Sum_probs=93.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH-HHHHHCCCCC-CEEEEEECCHHHHHH-HHHHHCCCCCEEE
Q ss_conf             988999999999999999688998579997487348999-8753205789-707997073688888-7653238763067
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVE-MALWSLLGYR-GVDVLAWESFGLGWM-SDIRQLSLQDVRE  119 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~e-a~~~nl~~~~-~~~~~~~g~~~~r~~-~~~~~~~~~~~~~  119 (391)
                      |.-..++.+.....+-++++++.--.+++++ =+||.=- .++..+-... +.-+++|-.--++-. +-+...+ ....+
T Consensus       100 SSll~kLTn~l~ld~lr~~G~~s~~~~~vvP-~ATGMsL~LcL~alr~~rp~a~yViw~RiDQKSc~K~i~~AG-l~piv  177 (444)
T TIGR03531       100 SSLLYKLTNKLVKDFLKLLGLRSVKSAIVVP-LATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAG-LEPRV  177 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-CCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHCC-CEEEE
T ss_conf             2899999999999999983985326579962-534518999999985018899889985355532688998659-72799


Q ss_pred             EE-CCCC--CCCCHHHCCC------CCCEEEEEEECCCCE-EEC----CEEEECCCCCCEEEEEEC---CH-HHHCCCC-
Q ss_conf             40-5777--6578676785------565799742024202-203----203502568614886401---10-1102545-
Q gi|254780153|r  120 FT-APYG--SLPDFSKVDF------DRDVVFVWNGTTSGV-CVP----DVGFIPESREGLVICDAT---SA-VFARHID-  180 (391)
Q Consensus       120 ~~-~~~g--~~~~~~~~~~------~~~v~~~h~ETstGv-~~~----~~~~~~~~~~~llivD~v---Ss-~g~~p~d-  180 (391)
                      ++ ...|  -..++++++.      ++.+..++..||.=. ..|    ..+.+|..++++-||--.   ++ .....++ 
T Consensus       178 ie~~l~gd~l~tdv~~ie~~i~~~g~~~i~cVlSTTScFAPR~~D~i~eiAklC~~~~IpHvVNNAYGlQ~~~~~~~i~~  257 (444)
T TIGR03531       178 IETVLDGDRLTTDVEDIERAIEEIGPENILCVLSTTSCFAPRSPDDIEEIAKICAKYDIPHVVNNAYGLQSNKYMEKINK  257 (444)
T ss_pred             EEEEECCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH
T ss_conf             74075188774699999999998286764799853654599997669999999997499837842036617999999999


Q ss_pred             ---CCCCEEEEECCHHCCCCCCCCEEEEECHH
Q ss_conf             ---56857999700120017665154456778
Q gi|254780153|r  181 ---FNKLDVVTFSAQKVLGGEAGFGIIILSPA  209 (391)
Q Consensus       181 ---~~~iDv~~a~sQK~l~~ppGl~~v~~s~~  209 (391)
                         ...+|+++-|+-|||+.|=|=++|+-+++
T Consensus       258 A~r~GRVDa~VQStDKNflVPVGGaII~s~d~  289 (444)
T TIGR03531       258 AIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE  289 (444)
T ss_pred             HHHCCCCEEEEEECCCCEEEECCCEEEEECCH
T ss_conf             98649831999706866254348748971888


No 332
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=89.08  E-value=1.7  Score=22.58  Aligned_cols=292  Identities=16%  Similarity=0.062  Sum_probs=133.1

Q ss_pred             HHHHHHHHHHHHHCC--CCCCEEEEECCCCHHHHHHHHHHCCCCCC-----EEEEEECCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             999999999999688--99857999748734899987532057897-----07997073688888765323876306740
Q gi|254780153|r   49 RINKAIQLTRKVLEV--PENYRIAIVPASDTGAVEMALWSLLGYRG-----VDVLAWESFGLGWMSDIRQLSLQDVREFT  121 (391)
Q Consensus        49 i~~~~~~~l~~l~~~--p~~y~v~~l~GsgT~~~ea~~~nl~~~~~-----~~~~~~g~~~~r~~~~~~~~~~~~~~~~~  121 (391)
                      -+++...+|+++-|-  .+++.++|.+|| |.-+.|++..|-.++.     .-++..--|..- ......+-.  .. ..
T Consensus        47 eLe~~Ir~LH~~VGNAvtdgr~iv~GtGs-TQL~~Aav~ALs~~~~~~~~p~~VVa~aPyYs~-y~~qT~~~~--s~-~y  121 (363)
T pfam04864        47 ELEREIRRLHRAVGNAVTDDRYIVFGTGS-TQLLQAAVYALSPNVTPTSPPVKVVAAVPYYSV-YKEQTSYFD--SK-GY  121 (363)
T ss_pred             HHHHHHHHHHHHHCCCEECCEEEEEECCH-HHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC-CHHHHHHHC--CC-CC
T ss_conf             99999999998633421066169991788-999999998638899987887323556876644-287888845--67-84


Q ss_pred             CCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEE---ECCCCCCEEEEEECCHHHHC-CCC-CCCCEEEEECCHHCCC
Q ss_conf             577765786767855657997420242022032035---02568614886401101102-545-5685799970012001
Q gi|254780153|r  122 APYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGF---IPESREGLVICDATSAVFAR-HID-FNKLDVVTFSAQKVLG  196 (391)
Q Consensus       122 ~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~---~~~~~~~llivD~vSs~g~~-p~d-~~~iDv~~a~sQK~l~  196 (391)
                      .+.|   +...+... +-.-...|-.|.=.||.-.+   +........|-|-.=--... ||. ...-|++.+.--|+- 
T Consensus       122 ~w~G---da~~~~~~-~~~~~~IElVtSPNNPdG~lr~aV~~g~~~k~i~D~aYYWPhyTpIt~~aD~DIMLFTlSK~T-  196 (363)
T pfam04864       122 EWKG---NASAYVNT-DNPGPFIELVTSPNNPDGTLREAVIDGSEAKVIHDLAYYWPHYTPITYPADEDIMLFTMSKYT-  196 (363)
T ss_pred             EECC---CHHHHCCC-CCCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC-
T ss_conf             4634---68983679-998872899838999840133665069984188752000666667677776767989861223-


Q ss_pred             CCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHH---HHHHHHHHHCCCCHHH
Q ss_conf             7665--1544567788876541144577831232001123210334786446664488999---9999986201031899
Q gi|254780153|r  197 GEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIED---YIDALLWLKKMGGLSA  271 (391)
Q Consensus       197 ~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~a---l~~~l~~i~~~gGl~~  271 (391)
                      |-+|  +|.++++++.+.+.              +..+.+       -+|..+.-...+++   |..+++.++.+.|-..
T Consensus       197 GHAGsRiGWALVKD~~Vakk--------------M~~y~~-------lNt~GvS~dSQlRa~kiLkvv~~~~~~~~~~~~  255 (363)
T pfam04864       197 GHAGSRFGWALVKDEEVAKK--------------MVEYIE-------LNTIGVSKESQLRTLKILKVVLATCKTESGTMG  255 (363)
T ss_pred             CCCCCCEEEEEECCHHHHHH--------------HHHHHH-------HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf             67625234788637999999--------------999976-------505306889999999999999976326766235


Q ss_pred             H----HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC
Q ss_conf             9----999997799999998747971676688200365317898247310113734567888999998886282872665
Q gi|254780153|r  272 C----VERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS  347 (391)
Q Consensus       272 ~----~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~  347 (391)
                      +    ...-+++=+.|++.++.++-|++....+.+..-....+ -+.|...=+.-+.+  .+++....|.+.+++..-|.
T Consensus       256 iF~fg~~~m~~RW~~L~~~v~~S~~FsL~~~~p~yC~ff~~~~-~~sPafaWlkCe~e--ed~DC~~~L~~~~I~~r~G~  332 (363)
T pfam04864       256 FFDFGYQTMRERWERLRELVSSSTRFSLQKLPPEYCNYFKKIR-EPSPAYAWLKCEWE--EDTDCYEVLREGKILTRSGE  332 (363)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCC-CCCCCEEEEEECCC--CHHHHHHHHHHCCEECCCCC
T ss_conf             7899999999999999999711580772677877665423216-89986379972663--20179999987886456876


Q ss_pred             CCCCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             567675-05686158889999999999999
Q gi|254780153|r  348 YRDAPL-GLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       348 ~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                      +=.++. ..|+|+.-  ..+|.+.|++-|+
T Consensus       333 ~Fga~~~YVRlSll~--~~d~Fd~lleRL~  360 (363)
T pfam04864       333 RFGADSRYVRLSLIK--TQDDFDQLLQRLK  360 (363)
T ss_pred             CCCCCCCEEEEEEEC--CHHHHHHHHHHHH
T ss_conf             458898769998406--8878999999998


No 333
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase; InterPro: IPR010107   This entry represents Glutamate decarboxylase (gad;) it is a pyridoxal 5'-phosphate (PLP)-dependent enzyme, which catalyses the irreversible alpha-decarboxylation of L-glutamate to gamma-aminobutyrate (GABA). This enzyme is widely distributed amongst eukaryotes and prokaryotes, but its function varies in different organisms .   Gad has a crucial role in the vertebrate central nervous system where it is responsible for the synthesis of GABA, the major inhibitory neurotransmitter. In the majority of vertebrates Gad occurs in two isoforms, GAD65 and GAD67, both active at neutral pH . Gad isoforms (GadA and GadB) have also been reported in some bacterial species, including the Gram-negative bacterium  and Gram-positive bacterium .   A unique feature of plant and yeast Gad is the presence of a calmodulin (CaM)-binding domain in the C-terminal region. In Saccharomyces cerevisiae, Gad expression is required for normal oxidative stress tolerance . In plants, Gad is thought to be a stress-adapter chaperonin sensing Ca2+ signals.; GO: 0004351 glutamate decarboxylase activity, 0030170 pyridoxal phosphate binding, 0006536 glutamate metabolic process.
Probab=83.11  E-value=3.4  Score=20.63  Aligned_cols=316  Identities=17%  Similarity=0.076  Sum_probs=185.9

Q ss_pred             HHHH-HHHHHHHHHHHHHHCCC--CCCEE-EEECCCCHHHHHHHHHHCC--------------CCCC--EEEEEECCHHH
Q ss_conf             8899-99999999999996889--98579-9974873489998753205--------------7897--07997073688
Q gi|254780153|r   44 VLGK-ERINKAIQLTRKVLEVP--ENYRI-AIVPASDTGAVEMALWSLL--------------GYRG--VDVLAWESFGL  103 (391)
Q Consensus        44 ~~f~-~i~~~~~~~l~~l~~~p--~~y~v-~~l~GsgT~~~ea~~~nl~--------------~~~~--~~~~~~g~~~~  103 (391)
                      |.-- +|-.+|.+.|.+||++|  .|.+. =++-.|-+|.=|||++..+              ++.+  +==+|.|.=-|
T Consensus        84 PqTar~i~~RCVnM~a~LfhAp~~~D~~~~savGtsTiGSSEAiMLGGlAmK~rWr~R~~~~Gk~~d~kKPNlv~g~~vQ  163 (493)
T TIGR01788        84 PQTAREIENRCVNMLADLFHAPALKDEEAASAVGTSTIGSSEAIMLGGLAMKWRWRKRMKAAGKPADAKKPNLVMGSNVQ  163 (493)
T ss_pred             CHHHHHHHHCCEEHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCE
T ss_conf             54489885043012344114787778775664351773258999987777579999999863888787887236079861


Q ss_pred             HHHHHHHHCCCCCEEEEECCC-C-CCCCHHH----CCCCCC-EEEEEEECCCCEEECCE------EEE--CC----CCCC
Q ss_conf             888765323876306740577-7-6578676----785565-79974202420220320------350--25----6861
Q gi|254780153|r  104 GWMSDIRQLSLQDVREFTAPY-G-SLPDFSK----VDFDRD-VVFVWNGTTSGVCVPDV------GFI--PE----SREG  164 (391)
Q Consensus       104 r~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~----~~~~~~-v~~~h~ETstGv~~~~~------~~~--~~----~~~~  164 (391)
                      =..+.++++--++...+--.. + ...++++    +|+.+- |+.+-.-|=||-.=|+.      ..+  .+    .-++
T Consensus       164 VCWEKF~RYfdVE~R~VP~~~r~r~~i~Pe~~~~~vDENTIGV~~ILG~TyTG~yE~v~~lnD~L~~~~~~~PDWsg~d~  243 (493)
T TIGR01788       164 VCWEKFARYFDVELREVPMDKRDRYVIDPEEVVDLVDENTIGVVAILGTTYTGEYEDVKALNDLLEELNAKTPDWSGWDI  243 (493)
T ss_pred             EEECCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             64212203355401367207777601188999986076752488874723258708889999999997427887477876


Q ss_pred             EEEEEECCHHHHCCCC------------CCCCE---EE-E-ECCHHCCC-CCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             4886401101102545------------56857---99-9-70012001-766515445677888765411445778312
Q gi|254780153|r  165 LVICDATSAVFARHID------------FNKLD---VV-T-FSAQKVLG-GEAGFGIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       165 llivD~vSs~g~~p~d------------~~~iD---v~-~-a~sQK~l~-~ppGl~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
                      ++=|||-|.=.-.||-            .|.+-   |+ + +|.+| .| .+||+|.|+.+.+      +     ..|.=
T Consensus       244 PiHvDAASGGFi~PFGfekehmk~~PDl~WDFRLprV~SINvSGHK-YGLvYPGvGWViWRd~------e-----~LPeE  311 (493)
T TIGR01788       244 PIHVDAASGGFIAPFGFEKEHMKVEPDLEWDFRLPRVKSINVSGHK-YGLVYPGVGWVIWRDE------E-----ALPEE  311 (493)
T ss_pred             CEEEECCCCCCCCCCCCCCCCEEECCCEEECCCCCCEEEECCCCCC-CCCCCCCCCEEEECCC------C-----CCHHH
T ss_conf             6477446788113766353411545712656617824687046551-2464766126887581------1-----37013


Q ss_pred             HHCCHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCCCC
Q ss_conf             320011232103347864466-6448899999999862010318999999997799999998747----97167668820
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINT-PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN----DWIENLAVDET  301 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~T-P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~----~~~~~~~~~~~  301 (391)
                      |-+.-. .........+.=|. |+-+.|...-.-|+ +=.+ |-..+.+.+...|+.|.+.|+++    +-|+.+....+
T Consensus       312 LiF~vn-YLGg~~~tFtLNFSrp~~qViaQYYnFlR-LG~~-GYr~i~q~~~~vA~~La~~~~~~sklPG~Fe~~s~g~~  388 (493)
T TIGR01788       312 LIFHVN-YLGGDEPTFTLNFSRPANQVIAQYYNFLR-LGRE-GYRKIMQNLLDVAQYLAEEIAKLSKLPGPFEILSDGRE  388 (493)
T ss_pred             CEEECC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHH-CCHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf             111011-02665654301355762311364466885-0401-34899998999999999999986069984588717875


Q ss_pred             ---------------------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC---CC-----
Q ss_conf             ---------------------0365317898247310113734567888999998886282872665567---67-----
Q gi|254780153|r  302 ---------------------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD---AP-----  352 (391)
Q Consensus       302 ---------------------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~---~~-----  352 (391)
                                           ....=+|+|+++|....+    +..--..++...|...|-+|=.  |+.   +.     
T Consensus       389 sienDsaPksvkDYWehPqaY~~~~P~VaFrLKd~~~~~----Y~~Yt~~~ls~~LR~rGWiVPA--YtlP~~~~GsDd~  462 (493)
T TIGR01788       389 SIENDSAPKSVKDYWEHPQAYKSGIPLVAFRLKDDADEE----YTGYTLYDLSHKLRERGWIVPA--YTLPKNAEGSDDI  462 (493)
T ss_pred             CCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCC----CCCCCHHHHHHHHHHCCCCCCC--CCCCCCCCCCCCE
T ss_conf             433456774012331364122789777988536877888----8767899999985034731347--8884335677872


Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             5056861588899999999999999999
Q gi|254780153|r  353 LGLRVWVGVTVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       353 ~~~RIg~~g~i~~~dv~~L~~aLe~~~~  380 (391)
                      ..+||=+=-..+.+=-+.|++=++-+.+
T Consensus       463 ~v~RiVvRe~~~~d~A~~Li~D~~~~~~  490 (493)
T TIGR01788       463 EVLRIVVREDFSRDLAELLIEDLEKALA  490 (493)
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf             7999987258984069999999999999


No 334
>KOG0634 consensus
Probab=71.31  E-value=7.5  Score=18.48  Aligned_cols=165  Identities=14%  Similarity=0.144  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHCCC--CCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEE-EE
Q ss_conf             889999999999999996889--985799974873489998753205789707997073688888765323876306-74
Q gi|254780153|r   44 VLGKERINKAIQLTRKVLEVP--ENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVR-EF  120 (391)
Q Consensus        44 ~~f~~i~~~~~~~l~~l~~~p--~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~-~~  120 (391)
                      .=.-+++..++...+..++.|  .+|. +++++|.|-+++-+...++..++.+++.--.|..- .+-+...+ +.+. +.
T Consensus       100 ~G~peLl~fik~h~~~~ih~p~~~~wd-iiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~A-L~s~~a~g-v~~ipv~  176 (472)
T KOG0634         100 SGIPELLLFIKDHNRPTIHAPPYKNWD-IIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSA-LQSMEALG-VKIIPVK  176 (472)
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCE-EEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHH-HHHCCCCC-CEEEECC
T ss_conf             684899999987462314277778843-89806872178999998516788268740343678-87331048-4577414


Q ss_pred             ECCCCCCCC-H----HHCCCC------CCEEEE--EEECCCCEEECCEEE-----ECCCCCCEEEEEECCHHHHCC----
Q ss_conf             057776578-6----767855------657997--420242022032035-----025686148864011011025----
Q gi|254780153|r  121 TAPYGSLPD-F----SKVDFD------RDVVFV--WNGTTSGVCVPDVGF-----IPESREGLVICDATSAVFARH----  178 (391)
Q Consensus       121 ~~~~g~~~~-~----~~~~~~------~~v~~~--h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs~g~~p----  178 (391)
                      -...|..++ +    +.|+..      ..|.+|  -.-.-||.....+..     ++.+++.|+|-|=.=.+.-++    
T Consensus       177 md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~  256 (472)
T KOG0634         177 MDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNP  256 (472)
T ss_pred             CCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCC
T ss_conf             56789887999989864885434689970799676888998874689999999999987678999247631243366688


Q ss_pred             ------------------------CCCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHH
Q ss_conf             ------------------------45568579997001200176651--544567788876
Q gi|254780153|r  179 ------------------------IDFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVER  213 (391)
Q Consensus       179 ------------------------~d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~  213 (391)
                                              +|.++-=+-..+.-|-++  ||+  |.+..++..++|
T Consensus       257 ~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia--PGlRlG~it~~~~~l~r  315 (472)
T KOG0634         257 SLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA--PGLRLGWITGNSLFLKR  315 (472)
T ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHC--CCCEEEEEECCHHHHHH
T ss_conf             766467552478898864477323666661786341244416--76315786357778888


No 335
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=70.61  E-value=7.7  Score=18.38  Aligned_cols=314  Identities=15%  Similarity=0.029  Sum_probs=157.7

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--HCC-CCC----CEEEEEECCHHHHHHHHHHHCCCCCEE
Q ss_conf             9999999999999996889985799974873489998753--205-789----707997073688888765323876306
Q gi|254780153|r   46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW--SLL-GYR----GVDVLAWESFGLGWMSDIRQLSLQDVR  118 (391)
Q Consensus        46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~--nl~-~~~----~~~~~~~g~~~~r~~~~~~~~~~~~~~  118 (391)
                      ..+++.+.++-|+++-+...  -.+=-..|+.|-+...+.  ..- ..|    ++.++-....|-.-+  .+.+.+.+|.
T Consensus       107 ~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA--SAam~G~~VV  182 (496)
T COG1003         107 YLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA--SAAMAGFKVV  182 (496)
T ss_pred             HHHHHHHHHHHHHHHCCCCE--EECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH--HHHHCCCEEE
T ss_conf             99999999999997409762--6406787764156789999999997588777679831655689865--6765485599


Q ss_pred             EEECCCCCCCCHHHCCC----CCCEEEEEEECCCCEEECC-EEE--ECCCCCCEEEEEECCH---HH-HCCCCCCCCEEE
Q ss_conf             74057776578676785----5657997420242022032-035--0256861488640110---11-025455685799
Q gi|254780153|r  119 EFTAPYGSLPDFSKVDF----DRDVVFVWNGTTSGVCVPD-VGF--IPESREGLVICDATSA---VF-ARHIDFNKLDVV  187 (391)
Q Consensus       119 ~~~~~~g~~~~~~~~~~----~~~v~~~h~ETstGv~~~~-~~~--~~~~~~~llivD~vSs---~g-~~p~d~~~iDv~  187 (391)
                      ++.....-.+|++++..    .....++-|-++-|+--.. .++  +.|+.|.++-.|+.--   +| ++|=| .++||+
T Consensus       183 ~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd-~G~DV~  261 (496)
T COG1003         183 VVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGD-MGFDVV  261 (496)
T ss_pred             EEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCC-CCCCEE
T ss_conf             9832898871699999874131158886168645450451999999999729989844754352522556655-656357


Q ss_pred             EECCHHCCCCC-----CCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH--CCCC----C-CCCCCCCCHHHHHH
Q ss_conf             97001200176-----65154456778887654114457783123200112321--0334----7-86446664488999
Q gi|254780153|r  188 TFSAQKVLGGE-----AGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM--EGLF----C-GETINTPSLLCIED  255 (391)
Q Consensus       188 ~a~sQK~l~~p-----pGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~-~~~~~TP~v~~i~a  255 (391)
                      =.--+|-|+.|     ||.+.|.++..+..-+       +.|.  .+....++.  ....    + ...+..-++..+.-
T Consensus       262 HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfL-------P~p~--~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~  332 (496)
T COG1003         262 HLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFL-------PGPV--VYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAW  332 (496)
T ss_pred             EEECCCCCCCCCCCCCCCCCCEEHHHHCCCCC-------CCCC--CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH
T ss_conf             75223110258888999877602585512338-------9873--34777530036787764226514557616899999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999862010318999999997799999998747971676688200365317898247310113734567888999998
Q gi|254780153|r  256 YIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF  335 (391)
Q Consensus       256 l~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~  335 (391)
                      .  .+..+=.+ ||...-+..--+++.+-..++.  .+. ..-.+.. -...-++.-..|.     ...-+.-..++.++
T Consensus       333 ~--YI~~mG~~-GL~~ase~AvLNANYia~rL~~--~y~-~~y~~~~-~~~HE~ild~r~l-----~~~~Gv~~~DvAKr  400 (496)
T COG1003         333 A--YIRMMGAD-GLKQASEVAVLNANYIARRLKG--YYP-VPYTGEN-RVAHECILDARPL-----KKETGVRALDVAKR  400 (496)
T ss_pred             H--HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH--CCC-CCCCCCC-CCEEEEEEECHHH-----HHHCCCCHHHHHHH
T ss_conf             9--99987577-8889899999847999997540--275-5547887-6115899605666-----76429838999999


Q ss_pred             HHHCCEEECCCCCCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             886282872665567-67505686158889999999999999999999998
Q gi|254780153|r  336 LEKEEIAYDIGSYRD-APLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       336 l~~~g~~~~~~~~r~-~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      |...|..--+-.+.. +...+=|----.-+.+++|+.+++|.-.-.+.+..
T Consensus       401 LlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~  451 (496)
T COG1003         401 LLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV  451 (496)
T ss_pred             HHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             872588887465753356504535777768899999999999999998746


No 336
>cd01013 isochorismatase Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems. Isochorismatase is part of the phenazine biosynthesis pathway. Phenazines are antimicrobial compounds that provide the competitive advantage for certain bacteria.
Probab=69.10  E-value=7.6  Score=18.45  Aligned_cols=122  Identities=10%  Similarity=0.019  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHCC--CCCCEEEEEC--CCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCC-
Q ss_conf             9999999999688--9985799974--8734899987532057897079970736888887653238763067405777-
Q gi|254780153|r   51 NKAIQLTRKVLEV--PENYRIAIVP--ASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYG-  125 (391)
Q Consensus        51 ~~~~~~l~~l~~~--p~~y~v~~l~--GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g-  125 (391)
                      .++..++++|+..  ..+-.|++..  +.......+...++.+++    +..|.|+.....++.-..+ +..+.+.-+. 
T Consensus        53 ~~vv~ni~rL~~aaR~~GipVi~t~~~~~~~~~~r~~~~~~~g~~----~~~g~~g~eiv~eL~P~~~-d~vi~K~~~sa  127 (203)
T cd01013          53 PQLIANIARLRDWCRQAGIPVVYTAQPGNQTPEQRALLNDFWGPG----LTASPEETKIVTELAPQPD-DTVLTKWRYSA  127 (203)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCCCCC-CEEEECCCCCC
T ss_conf             889999999999999879969998347879966730011023788----7689864533714389999-98985486788


Q ss_pred             -CCCCHHHC---CCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEECCHHHHC
Q ss_conf             -65786767---85565799742024202203203502568614886401101102
Q gi|254780153|r  126 -SLPDFSKV---DFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFAR  177 (391)
Q Consensus       126 -~~~~~~~~---~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~vSs~g~~  177 (391)
                       ...+++.+   ...+.+.++...|..+|...........+...++.||+++.-..
T Consensus       128 F~~T~L~~~Lr~~gi~~Lvv~Gv~T~~CV~~T~rdA~~~gy~v~vv~Da~a~~~~e  183 (203)
T cd01013         128 FKRSPLLERLKESGRDQLIITGVYAHIGCLSTAVDAFMRDIQPFVVADAIADFSLE  183 (203)
T ss_pred             CCCCCHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCHH
T ss_conf             67999899999769998999865425139999999998799499931145789999


No 337
>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437   This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is:    Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).
Probab=68.35  E-value=8.6  Score=18.08  Aligned_cols=271  Identities=16%  Similarity=0.117  Sum_probs=137.4

Q ss_pred             CCCHHHHHHHHHHC-CCCCC-EE-EEEECCHHHHHHHHH-HHCCCCCEEEEECCCCCCCCHHHCCCCCC--EEEEEEECC
Q ss_conf             87348999875320-57897-07-997073688888765-32387630674057776578676785565--799742024
Q gi|254780153|r   74 ASDTGAVEMALWSL-LGYRG-VD-VLAWESFGLGWMSDI-RQLSLQDVREFTAPYGSLPDFSKVDFDRD--VVFVWNGTT  147 (391)
Q Consensus        74 GsgT~~~ea~~~nl-~~~~~-~~-~~~~g~~~~r~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--v~~~h~ETs  147 (391)
                      =-||.|=||+++++ +++.+ +. ++|.-.-=..-..-+ .|..-...+++..+...+.+..++=...+  -++++-=-+
T Consensus       137 DEgTAAaEAMals~~vSk~Knan~ffva~d~HpQT~~V~~TRA~pfgiEvIv~D~~~~~~~~dvfknPdvsG~LlQypaT  216 (965)
T TIGR00461       137 DEGTAAAEAMALSFRVSKKKNANKFFVAKDVHPQTLEVVKTRAKPFGIEVIVDDASDVKKAVDVFKNPDVSGVLLQYPAT  216 (965)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf             17889999999987642222110110210377343688752403145168863445556544332177744157623577


Q ss_pred             CCEEECCEE---EE--CCCCCCEEEEEECCHHHHCCC----CCCCCEEEEECCHHCCCCCCCCE----------------
Q ss_conf             202203203---50--256861488640110110254----55685799970012001766515----------------
Q gi|254780153|r  148 SGVCVPDVG---FI--PESREGLVICDATSAVFARHI----DFNKLDVVTFSAQKVLGGEAGFG----------------  202 (391)
Q Consensus       148 tGv~~~~~~---~~--~~~~~~llivD~vSs~g~~p~----d~~~iDv~~a~sQK~l~~ppGl~----------------  202 (391)
                      +|-.+|...   .+  .|.+..  +|=-.|++.++-+    -.-+.|+++.|+|. ||.|=|.|                
T Consensus       217 dG~i~PPddy~~lid~lhshk~--lvsvAaD~maLtLL~pPg~~GADIv~GS~QR-FGvPmGYGGPHAAfFA~kdey~Rk  293 (965)
T TIGR00461       217 DGEIYPPDDYKALIDKLHSHKA--LVSVAADLMALTLLTPPGKLGADIVLGSSQR-FGVPMGYGGPHAAFFAVKDEYKRK  293 (965)
T ss_pred             CCCCCCCHHHHHHHHHHHCCHH--HHHHHHHHHHHHHCCCCHHCCCCEEEECCCC-CCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             7723686228999998741301--2467878999985058213088678625432-565688872448999999984488


Q ss_pred             ----EEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCHHHHHHHHH
Q ss_conf             ----4456778887654114457783123200112321033478644666448899999999-86201031899999999
Q gi|254780153|r  203 ----IIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-LWLKKMGGLSACVERCN  277 (391)
Q Consensus       203 ----~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-~~i~~~gGl~~~~~r~~  277 (391)
                          +|.+||++.-+.           -|.++...+...=++..-|-|==-...+.|--.++ --+.--.||+++..|.-
T Consensus       294 ~PGRIvGvSKDa~G~t-----------ALRlAlQTREQHIrRdKAtSNICTaQvLLAn~AS~Y~VYHGp~GLknIa~RIh  362 (965)
T TIGR00461       294 MPGRIVGVSKDALGNT-----------ALRLALQTREQHIRRDKATSNICTAQVLLANVASLYAVYHGPKGLKNIARRIH  362 (965)
T ss_pred             CCCEEEEEECCCCCCH-----------HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             9950676511345877-----------89988631222010024566236899999998875011026645789999988


Q ss_pred             HHHHHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEE
Q ss_conf             7799999998747-971676688200365317898247310113734567888999998886282872665567675056
Q gi|254780153|r  278 ANAAVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLR  356 (391)
Q Consensus       278 ~~a~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~R  356 (391)
                      +....|-.+|++. -.+++.  ++-+-  =..++.+.+...          -...+.+++...++=  +  -......+=
T Consensus       363 ~LT~iLA~gl~~~sC~~~L~--n~~~F--DTL~v~vg~~~~----------~~ql~lkaae~~~IN--L--r~~~~~~vg  424 (965)
T TIGR00461       363 RLTSILAAGLKRKSCNYELR--NKYYF--DTLTVKVGDKAS----------SEQLVLKAAEEAEIN--L--RAVVLTEVG  424 (965)
T ss_pred             HHHHHHHHHHHHCCCCCCCC--CCCCC--CEEEEEECCCCC----------HHHHHHHHHHHCCCC--C--CCCCCCCEE
T ss_conf             89999999975306885114--35334--303663033466----------578999999755885--2--211325411


Q ss_pred             EECCCCCCHHHHHHHHHHHH
Q ss_conf             86158889999999999999
Q gi|254780153|r  357 VWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       357 Ig~~g~i~~~dv~~L~~aLe  376 (391)
                      |++==+++.+||..|.+.++
T Consensus       425 i~LDETtT~~dv~~L~~Vf~  444 (965)
T TIGR00461       425 IALDETTTKEDVLDLLKVFA  444 (965)
T ss_pred             EEECCHHHHHHHHHHHHHHC
T ss_conf             22142343899999999850


No 338
>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939    This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.
Probab=67.90  E-value=6.1  Score=19.05  Aligned_cols=94  Identities=15%  Similarity=0.129  Sum_probs=50.7

Q ss_pred             CCCC--HHHHHHHHHHCCCCCC-EEEEEECC-HHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCC
Q ss_conf             4873--4899987532057897-07997073-688888765323876306740577765786767855657997420242
Q gi|254780153|r   73 PASD--TGAVEMALWSLLGYRG-VDVLAWES-FGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTS  148 (391)
Q Consensus        73 ~Gsg--T~~~ea~~~nl~~~~~-~~~~~~g~-~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETst  148 (391)
                      +|+|  +-+|-+++.+. +.|. ++|+.+.+ +|..+.+.+++-...|.+....             .--|+=+|.=+=.
T Consensus        21 ~G~GKTn~c~~~a~~a~-~~Gk~v~YiDTEGGLS~ER~~q~~~~~~~D~e~~~~-------------~~iv~~~~~f~eQ   86 (223)
T TIGR02237        21 PGSGKTNICLILAVNAA-RQGKKVVYIDTEGGLSPERFKQIAEDRALDPERVLS-------------NVIVFEVFDFDEQ   86 (223)
T ss_pred             CCCCHHHHHHHHHHHHH-HCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHC-------------CEEEECCCCHHHH
T ss_conf             99867899999999998-618958999628983289999986305889888841-------------5355235356789


Q ss_pred             CEEECCEEEECCCC---CCEEEEEECCHHHHCCCC
Q ss_conf             02203203502568---614886401101102545
Q gi|254780153|r  149 GVCVPDVGFIPESR---EGLVICDATSAVFARHID  180 (391)
Q Consensus       149 Gv~~~~~~~~~~~~---~~llivD~vSs~g~~p~d  180 (391)
                      +........++...   --|+|||+.|+|.-.+-.
T Consensus        87 ~~ai~~~~~~~~~~G~~~~LvVvDs~t~~YRle~~  121 (223)
T TIGR02237        87 EVAIQKTSKLIDRDGDKADLVVVDSFTALYRLERS  121 (223)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHCCC
T ss_conf             99999999998606883314888153345420257


No 339
>KOG0628 consensus
Probab=67.85  E-value=8.8  Score=18.02  Aligned_cols=317  Identities=12%  Similarity=0.012  Sum_probs=158.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEE-------EEECCCCHHHHHHHHHH----C---CCCCC---------EEEEEE-
Q ss_conf             988999999999999999688998579-------99748734899987532----0---57897---------079970-
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRI-------AIVPASDTGAVEMALWS----L---LGYRG---------VDVLAW-   98 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v-------~~l~GsgT~~~ea~~~n----l---~~~~~---------~~~~~~-   98 (391)
                      ||-..++=--++.=|.+++++|+.+.-       =.+|||++.+.-.+++-    .   ++.+.         ..++++ 
T Consensus       108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~  187 (511)
T KOG0628         108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC  187 (511)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEE
T ss_conf             84067899999999999851809874367899960685475135899999999999998632897644055653424882


Q ss_pred             CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC----CC------CCEEEEEEECCCCEEECC---EEEECCCCCCE
Q ss_conf             736888887653238763067405777657867678----55------657997420242022032---03502568614
Q gi|254780153|r   99 ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD----FD------RDVVFVWNGTTSGVCVPD---VGFIPESREGL  165 (391)
Q Consensus        99 g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~------~~v~~~h~ETstGv~~~~---~~~~~~~~~~l  165 (391)
                      ..=++.-.+.++..++.....+..+.+.....+.+.    .+      +.....-..|++--.++.   ...+|.+++.-
T Consensus       188 SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glW  267 (511)
T KOG0628         188 SDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLW  267 (511)
T ss_pred             CCCCCCHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHCCHHHHCCEE
T ss_conf             47641268876744002688851366767787999999999986798657999840576555554187741035226878


Q ss_pred             EEEEEC---CHHHHCCCC--CCC---CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCC-CCCCCCHHHCCHHHHHH
Q ss_conf             886401---101102545--568---579997001200176651544567788876541144-57783123200112321
Q gi|254780153|r  166 VICDAT---SAVFARHID--FNK---LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVP-SWPLPKIFRMVKGGRVM  236 (391)
Q Consensus       166 livD~v---Ss~g~~p~d--~~~---iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~-~~~~~~~~~~~~~~~~~  236 (391)
                      +=|||.   |.+++.+++  +.+   .|-.-+-..|.+..-=--+...++++-     .... -.-.|-|++   +....
T Consensus       268 LHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~-----~~~~~~~vdp~yL~---h~~~~  339 (511)
T KOG0628         268 LHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGT-----KLSRAFNVDPLYLK---HAYQG  339 (511)
T ss_pred             EEEEHHHCCCCCCCHHHHHHHHCCHHHCCCCCCHHHEEEEEEEEECCEEECCC-----EEEEEEECCHHHHC---CHHHC
T ss_conf             99634531543158878877502233303357852603776530003450476-----04666503827644---43323


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             03347864466644889999999--9862010318999999997799999998747971676688200365317898247
Q gi|254780153|r  237 EGLFCGETINTPSLLCIEDYIDA--LLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD  314 (391)
Q Consensus       237 ~~~~~~~~~~TP~v~~i~al~~~--l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d  314 (391)
                      . ....--..-|=-.-+..|..-  ++.+--+ ++.+..++|.+.++.+.+-+.+-+-|+...  +  +-...+||+.++
T Consensus       340 ~-~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve-~lq~~iR~h~~La~~fe~lv~~d~~FE~~~--~--~~lgLvcFRlk~  413 (511)
T KOG0628         340 S-APDYRHWQIPLGRRFRSLKLWFVLRSYGVE-NLQNYIREHVRLAKEFETLVRADPRFEIVN--K--RILGLVCFRLKG  413 (511)
T ss_pred             C-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCEEEC--C--CCCCEEEEEECC
T ss_conf             6-888210115200113267899999988688-999999999999999999860487415502--2--100215775258


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE-EEEE-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3101137345678889999988862828726655676750-5686-15888999999999999999999999
Q gi|254780153|r  315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG-LRVW-VGVTVEKEDLLLLCDWLRWVFYFQKI  384 (391)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~-~RIg-~~g~i~~~dv~~L~~aLe~~~~~~k~  384 (391)
                      .+..          -+.+.+++...+-+. +..--..|+. +|-- +.+..+.+||+.-.+-|.....+.+.
T Consensus       414 ~N~~----------ne~Ll~~in~~g~i~-l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~  474 (511)
T KOG0628         414 DNEI----------NEALLNRLNSSGRIH-LVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFE  474 (511)
T ss_pred             CCHH----------HHHHHHHHHHCCCEE-EEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             7478----------999999997369689-977631466999998247878578899999999999999876


No 340
>KOG1412 consensus
Probab=62.77  E-value=11  Score=17.41  Aligned_cols=325  Identities=11%  Similarity=0.094  Sum_probs=160.1

Q ss_pred             CCCCCCCCCCCCCC---CHHHHHHHHHHHCCCCCCCC------------HHHHHHHHHHHHHHHHHHCCCCCCEEEEE-C
Q ss_conf             89988868887768---96899998632103653289------------88999999999999999688998579997-4
Q gi|254780153|r   10 KPKRPFFSSGPCAK---RPGWSLGILEGALLGRSHRC------------VLGKERINKAIQLTRKVLEVPENYRIAIV-P   73 (391)
Q Consensus        10 ~p~~~~F~pGP~~~---~p~~v~~~~~~~~l~~sHRs------------~~f~~i~~~~~~~l~~l~~~p~~y~v~~l-~   73 (391)
                      -|.+.|.+-|--+.   .| |||..+......+.|+.            +.|.+--.++.-+-.... +.++ +++=+ +
T Consensus        29 ~p~KvnL~igAYRtd~g~P-WvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a-~kE~-Rv~~vQs  105 (410)
T KOG1412          29 DPVKVNLGIGAYRTDDGKP-WVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPA-IKED-RVFGVQS  105 (410)
T ss_pred             CCCEEECCCCEEECCCCCE-EEEHHHHHHHHHCCCCHHCCCHHCCCCCCHHHHHHHHHHHCCCCCHH-HHHC-CCCCEEE
T ss_conf             7505502210477488986-67535543112036740105111331486356666587700788534-3322-1120242


Q ss_pred             CCCHHHHHHHHHHC--CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCC--CCCHH----HCCCC--CCEEEEE
Q ss_conf             87348999875320--578970799707368888876532387630674057776--57867----67855--6579974
Q gi|254780153|r   74 ASDTGAVEMALWSL--LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGS--LPDFS----KVDFD--RDVVFVW  143 (391)
Q Consensus        74 GsgT~~~ea~~~nl--~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~--~~~~~----~~~~~--~~v~~~h  143 (391)
                      =||||+.-...--|  .-+...+++.+-.|..-. ..+++.|...+..+..+..+  ..+++    +++.+  ..+.++|
T Consensus       106 lsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~-~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLh  184 (410)
T KOG1412         106 LSGTGALRIAADFLATFYNKNTVYVSNPTWENHH-AIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILH  184 (410)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHH-HHHHHCCCCEEEEEEEECCCCCEECHHHHHHHHHHCCCCCEEEEE
T ss_conf             1565324566788887524652674388606778-899873884455666315777121399999898638987378620


Q ss_pred             EE--CCCCEEECCEEE--E---CCCCCCEEEEEE-CCHHHHCCC--CCCC--------CEEEE-ECCHHCCCCC----CC
Q ss_conf             20--242022032035--0---256861488640-110110254--5568--------57999-7001200176----65
Q gi|254780153|r  144 NG--TTSGVCVPDVGF--I---PESREGLVICDA-TSAVFARHI--DFNK--------LDVVT-FSAQKVLGGE----AG  200 (391)
Q Consensus       144 ~E--TstGv~~~~~~~--~---~~~~~~llivD~-vSs~g~~p~--d~~~--------iDv~~-a~sQK~l~~p----pG  200 (391)
                      .+  .-||+.-..+.+  +   -+.+..+.+.|. -+.|.+=+.  |.|.        +.+.+ -|.-||+|.-    .-
T Consensus       185 aCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGn  264 (410)
T KOG1412         185 ACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGN  264 (410)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCC
T ss_conf             01369878997889999999999744760354202101246995410899999996187388776656431664655363


Q ss_pred             CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHCCCCHHHHH
Q ss_conf             154456778887654114457783123200112321033478644666448899999999-------8620103189999
Q gi|254780153|r  201 FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-------LWLKKMGGLSACV  273 (391)
Q Consensus       201 l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-------~~i~~~gGl~~~~  273 (391)
                      +.+|. ...+..           +...+......       ..+..-||..+-...++.|       +|+   ..+..|-
T Consensus       265 ltvv~-~n~a~i-----------~~v~SQl~lvi-------R~~~SNPPAyGArIV~kvL~tP~lre~W~---~sik~Ms  322 (410)
T KOG1412         265 LTVVV-NNPAVI-----------AGVKSQLTLVI-------RSNWSNPPAYGARIVHKVLSTPELREQWI---QSIKTMS  322 (410)
T ss_pred             EEEEE-CCHHHH-----------HHHHHHHHHHH-------HHCCCCCCCHHHHHHHHHHCCHHHHHHHH---HHHHHHH
T ss_conf             69994-475577-----------77887779988-------61267885114589999846888899999---9999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC
Q ss_conf             99997799999998747971676688200365317898247310113734567888999998886282872665567675
Q gi|254780153|r  274 ERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPL  353 (391)
Q Consensus       274 ~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~  353 (391)
                      .|..+....|++.+.+++--..    =++--...--|.+..     +.        ...+..|.++--++-+.       
T Consensus       323 sRI~~MR~aLrd~L~aL~TPGt----WDHI~~QiGMFSyTG-----Lt--------p~qV~~li~~h~vyLl~-------  378 (410)
T KOG1412         323 SRIKKMRTALRDHLVALKTPGT----WDHITQQIGMFSYTG-----LT--------PAQVDHLIENHKVYLLS-------  378 (410)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCC----HHHHHHHCCCEEECC-----CC--------HHHHHHHHHHCEEEEEC-------
T ss_conf             9999999999999986189985----778876505143148-----99--------89999998736389943-------


Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             05686158889999999999999999999998
Q gi|254780153|r  354 GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS  385 (391)
Q Consensus       354 ~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~  385 (391)
                      .=||++-| ....+|+-..+|||.+....|++
T Consensus       379 ~GRInisG-LN~~NveyVAkAIde~Vr~~~~~  409 (410)
T KOG1412         379 DGRINISG-LNMKNVEYVAKAIDETVRAIKSN  409 (410)
T ss_pred             CCCEEEEC-CCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             88376614-56545899999999999752368


No 341
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=62.64  E-value=11  Score=17.39  Aligned_cols=69  Identities=10%  Similarity=0.187  Sum_probs=42.9

Q ss_pred             HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE--ECCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             99999996889985799974873489998753205789707997--07368888876532387630674057
Q gi|254780153|r   54 IQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA--WESFGLGWMSDIRQLSLQDVREFTAP  123 (391)
Q Consensus        54 ~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~--~g~~~~r~~~~~~~~~~~~~~~~~~~  123 (391)
                      ...+-+.+++..+.+|+- -|+|||-..|++..++++...++.+  .-...+...+.+.+.+..++.....+
T Consensus        65 ~a~ml~~L~l~~~~~VLe-IGtGsGY~tAlla~lvg~~g~V~siE~~~~l~~~A~~~l~~~~~~nv~~~~gd  135 (214)
T PRK13942         65 VAIMCELLDLDEGQKVLE-IGTGSGYHAAVVAEIVGKSGKVTTIERIPELAEKAKKNLKKLGYENVEVILGD  135 (214)
T ss_pred             HHHHHHHHCCCCCCEEEE-ECCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             999999727999997999-67995299999999747678579997179999999999986376875898567


No 342
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=60.48  E-value=12  Score=17.15  Aligned_cols=52  Identities=21%  Similarity=0.252  Sum_probs=30.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEE
Q ss_conf             32898899999999999999968899857999748734899987532057897079
Q gi|254780153|r   40 SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDV   95 (391)
Q Consensus        40 sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~   95 (391)
                      |-|+..-...++.+++.-+.+-.- .   .++++||++|.||++.......+...+
T Consensus        23 s~~~~~~~~~~~~A~~lg~~la~~-g---~~V~tGG~~GiMea~~~gA~~~gg~~v   74 (205)
T COG1611          23 SARGIEPEEYYELARELGRELAKR-G---LLVITGGGPGVMEAVARGALEAGGLVV   74 (205)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHC-C---CEEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf             888889889999999999999767-9---889969865250578899987698389


No 343
>pfam09659 Cas_Csm6 CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.
Probab=51.49  E-value=17  Score=16.22  Aligned_cols=49  Identities=16%  Similarity=0.138  Sum_probs=37.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--HCCCCC
Q ss_conf             3289889999999999999996889985799974873489998753--205789
Q gi|254780153|r   40 SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW--SLLGYR   91 (391)
Q Consensus        40 sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~--nl~~~~   91 (391)
                      -|+=..|...+.+....|+.-.  |+ .++++=-.|||-||.+++.  |+.++-
T Consensus        17 ~~~fd~f~~~f~~~~~~i~~~~--~d-~eilLNlSSGTPQmks~L~~~~~~~~~   67 (382)
T pfam09659        17 PQQFDIFYPVFEKELIILHNAY--PD-CEILLNLSSGTPQMKSALHLINLTTPF   67 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC--CC-CEEEEECCCCCHHHHHHHHHHHHCCCC
T ss_conf             8774688999999999998529--98-669986688968999999999964754


No 344
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957   This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate.  L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=49.67  E-value=18  Score=16.04  Aligned_cols=322  Identities=15%  Similarity=0.126  Sum_probs=170.8

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHC-------CCC----CCEEEEECCCCHH
Q ss_conf             9888688877689689999863210365328--98899999999999999968-------899----8579997487348
Q gi|254780153|r   12 KRPFFSSGPCAKRPGWSLGILEGALLGRSHR--CVLGKERINKAIQLTRKVLE-------VPE----NYRIAIVPASDTG   78 (391)
Q Consensus        12 ~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHR--s~~f~~i~~~~~~~l~~l~~-------~p~----~y~v~~l~GsgT~   78 (391)
                      +..-|+==|+   ++...++|...+=  ||.  ++-=..=...+++-+.+.+.       -++    .-.|++ .+|++-
T Consensus        41 DPt~~gnL~~---~~~~~~a~~~~v~--S~~ynGY~p~vG~~~Ar~aia~~y~~sfvhn~~~~~~~~a~~Vvl-~SGCS~  114 (415)
T TIGR01264        41 DPTVFGNLPT---SEEAMQAMKESVD--SGKYNGYAPTVGALEAREAIAEYYRNSFVHNKRPDGSIEADDVVL-CSGCSH  114 (415)
T ss_pred             CCCCCCCCCC---CHHHHHHHHHHHC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-CCCCHH
T ss_conf             8888889988---8899999998752--566067720013488889999987631100236687201276477-167027


Q ss_pred             HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC-CCCC--CCCHHHC----CCCCCEEEEEE-ECCCCE
Q ss_conf             99987532057897079970736888887653238763067405-7776--5786767----85565799742-024202
Q gi|254780153|r   79 AVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA-PYGS--LPDFSKV----DFDRDVVFVWN-GTTSGV  150 (391)
Q Consensus        79 ~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~-~~g~--~~~~~~~----~~~~~v~~~h~-ETstGv  150 (391)
                      |+++++.-+..+|+-+++=-=||...  ..+++-.+..+..+.- -.++  -.|++++    |..+...++-| ..-+|-
T Consensus       115 Al~~ai~a~Ad~G~nvLVP~PGFplY--~Tlc~~~~i~~~~Y~~d~~d~~w~~DL~~l~~LiDd~T~~l~vnNPSNPcGS  192 (415)
T TIGR01264       115 ALEMAIEALADAGQNVLVPRPGFPLY--ETLCKALGIEVKLYNLDLPDEDWEIDLKQLESLIDDKTKALIVNNPSNPCGS  192 (415)
T ss_pred             HHHHHHHHHCCCCCEEECCCCCCCHH--HHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
T ss_conf             89999999537978063078887207--8864014762000025798733566489886312567407888375778898


Q ss_pred             EEC---CEEE--ECCCCCCEEEEEECCH------------HHHC-CCCCCCCE-EEEECCHHCCCCCCC--CEEEEECHH
Q ss_conf             203---2035--0256861488640110------------1102-54556857-999700120017665--154456778
Q gi|254780153|r  151 CVP---DVGF--IPESREGLVICDATSA------------VFAR-HIDFNKLD-VVTFSAQKVLGGEAG--FGIIILSPA  209 (391)
Q Consensus       151 ~~~---~~~~--~~~~~~~llivD~vSs------------~g~~-p~d~~~iD-v~~a~sQK~l~~ppG--l~~v~~s~~  209 (391)
                      .+.   +.++  +|+.+..++++|=+=.            |-+. .++ .++= +...|--|.|. .||  ||=+++-++
T Consensus       193 vF~~~Hl~~l~a~A~~~~Lpi~ADEIY~~~VF~GkDPnatF~~lA~L~-s~VP~~~cgG~AKr~l-VPGWRLGWli~hd~  270 (415)
T TIGR01264       193 VFRREHLEELLALAERLKLPIIADEIYGDMVFKGKDPNATFTPLASLS-SKVPILSCGGLAKRWL-VPGWRLGWLIIHDR  270 (415)
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCC-CCCCEEEECCCCCCCC-CCCCCCCCEEEECC
T ss_conf             878788999999987538723664202565138867864220202377-9988687076320022-47611024788878


Q ss_pred             HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r  210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE  289 (391)
Q Consensus       210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~  289 (391)
                                ....-+  ....-.+..     -+-.-=|+|..==||.+.|..-=++ =++.....-+.+|..+|+.|+.
T Consensus       271 ----------~~~~~~--e~~~GL~~l-----s~~i~GpntlvQGAl~~iL~~TPq~-Yf~~~~~~l~~nA~~~y~~La~  332 (415)
T TIGR01264       271 ----------KGVLRD--EVKDGLKKL-----SQRILGPNTLVQGALPEILLKTPQE-YFDGTVSVLESNAMLVYEILAE  332 (415)
T ss_pred             ----------CCCCCH--HHHHHHHHH-----HCHHCCCCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_conf             ----------886502--688999997-----2300462011442179886406556-7789999987408999988510


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEC-CC-CCCHHH
Q ss_conf             7971676688200365317898247310113734567888999998886282872665567675056861-58-889999
Q gi|254780153|r  290 NDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV-GV-TVEKED  367 (391)
Q Consensus       290 ~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~-~g-~i~~~d  367 (391)
                      -.|+.+.-+.    +.|=+-+.+.-..+..  ...+-.|...+   +.+|++.+=-|.==..|.-|||-+ -+ .+-.|-
T Consensus       333 v~Gl~pv~P~----GaMY~m~~i~~e~F~e--~k~Dv~F~~~L---~~E~sV~cLPG~~F~~PGf~Rvv~T~P~~~~~EA  403 (415)
T TIGR01264       333 VPGLRPVMPK----GAMYMMVGIELEKFPE--FKSDVEFVEKL---VEEESVFCLPGSCFEYPGFFRVVLTVPSSMMEEA  403 (415)
T ss_pred             CCCCEEECCC----CCEEEEEEEECCCCCC--CCCHHHHHHHH---HHHCCCEECCHHHHCCCCCEEEEEECCHHHHHHH
T ss_conf             6886111488----7558756002001777--24117999998---5114630464164458995899970780678999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780153|r  368 LLL  370 (391)
Q Consensus       368 v~~  370 (391)
                      +.+
T Consensus       404 ~~R  406 (415)
T TIGR01264       404 CSR  406 (415)
T ss_pred             HHH
T ss_conf             999


No 345
>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860    L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=49.36  E-value=18  Score=16.01  Aligned_cols=306  Identities=16%  Similarity=0.112  Sum_probs=165.8

Q ss_pred             CCCCCCCCCC-CCHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             8886888776-89689999863210--36532898899999999999999968899857999748734899987532057
Q gi|254780153|r   13 RPFFSSGPCA-KRPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG   89 (391)
Q Consensus        13 ~~~F~pGP~~-~~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~   89 (391)
                      -.-||+-=++ -+|..++.++...+  +++ -=++++..    .+.-+.+--+++.| .|+- +-|++..+..++..+..
T Consensus         7 lLDFsAninPlgpP~S~~aa~~~aLd~~~r-YPD~dY~h----lrqA~AdH~q~~~d-wvl~-gnG~~e~i~la~~t~~~   79 (349)
T TIGR01140         7 LLDFSANINPLGPPASVKAALAAALDALER-YPDDDYIH----LRQALADHHQVAAD-WVLA-GNGELESIRLAAETLVS   79 (349)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCHHH----HHHHHHHHHCCCCC-CEEC-CCCCHHHHHHHHHHCCC
T ss_conf             032434578888760204589874278760-88843189----99998654125601-2545-99727888998861478


Q ss_pred             CCCEEEEEECCHHHHHHHHHHHCCCCCEE---E-EE--CCCCCCCCHHHCCC------CCC-EEEEEEECCCCEEECCEE
Q ss_conf             89707997073688888765323876306---7-40--57776578676785------565-799742024202203203
Q gi|254780153|r   90 YRGVDVLAWESFGLGWMSDIRQLSLQDVR---E-FT--APYGSLPDFSKVDF------DRD-VVFVWNGTTSGVCVPDVG  156 (391)
Q Consensus        90 ~~~~~~~~~g~~~~r~~~~~~~~~~~~~~---~-~~--~~~g~~~~~~~~~~------~~~-v~~~h~ETstGv~~~~~~  156 (391)
                      .|+.++++.=+|++. .......| ++..   + +.  .+|...-+++++..      ..+ +..|-=..-||.......
T Consensus        80 ~Gd~~~V~~P~F~eY-gR~~~~~G-ae~~ti~w~~~~~~~W~~~~dPseiA~l~A~~s~h~~lilctPnNPtG~l~~r~~  157 (349)
T TIGR01140        80 RGDAVLVVAPAFAEY-GRELELAG-AELKTIRWSLDEADGWRVLRDPSEIALLDAVTSEHDLLILCTPNNPTGDLLERDA  157 (349)
T ss_pred             CCCEEEEECCCCHHH-HHHHHHCC-CCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHH
T ss_conf             887578708870267-99998569-8122345773168887455764566541268833135311176769898622478


Q ss_pred             E---E--CCCCCCEEEEEEC-CHHH--HCCC----CCCC-CEEEEE-CCHHCCCCCCCC--EEEEECHH-HHHHHHHCCC
Q ss_conf             5---0--2568614886401-1011--0254----5568-579997-001200176651--54456778-8876541144
Q gi|254780153|r  157 F---I--PESREGLVICDAT-SAVF--ARHI----DFNK-LDVVTF-SAQKVLGGEAGF--GIIILSPA-SVERLEKYVP  219 (391)
Q Consensus       157 ~---~--~~~~~~llivD~v-Ss~g--~~p~----d~~~-iDv~~a-~sQK~l~~ppGl--~~v~~s~~-al~~~~~~~~  219 (391)
                      +   .  |+.-+.-+++|=- =+|.  +.+-    +..+ =.+++. |--|=+ +-|||  |+++.+++ ++.+....+.
T Consensus       158 l~A~a~rc~~~N~~LllDEAF~dF~pPG~E~~l~p~l~~~P~~~vlRSLTKfy-~lPGLRlGylva~~Da~la~~r~~r~  236 (349)
T TIGR01140       158 LRALADRCKAVNIELLLDEAFLDFLPPGEETSLVPSLKDTPNVVVLRSLTKFY-ALPGLRLGYLVAVDDALLARLRAARR  236 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCHHHHH-CCHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf             99999888874046666556515789864434341332689789971115540-25024454555166178999997428


Q ss_pred             CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r  220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD  299 (391)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~  299 (391)
                      +|.                         -++..-.+-..+|+   +++=.+..++.-..-...+|..+...+++..++  
T Consensus       237 pW~-------------------------vnalAaaag~~al~---~sef~q~tw~wl~~erar~~qaL~~lP~l~v~P--  286 (349)
T TIGR01140       237 PWS-------------------------VNALAAAAGAAALR---DSEFRQETWRWLAEERARLRQALADLPLLDVYP--  286 (349)
T ss_pred             CCC-------------------------CCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--
T ss_conf             998-------------------------77689999999876---678999998743667789999997178875588--


Q ss_pred             CCCCCCCEEEE-EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE-CCCCCCCCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             20036531789-824731011373456788899999888628287-2665567675-05686158889999999999999
Q gi|254780153|r  300 ETTRSNTSICM-KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAY-DIGSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       300 ~~~rS~~~v~~-~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                          |.++-.+ ++..+.     .+       .....+.+++|.+ +--.||..+. -+||.+   .+++|-++|++||.
T Consensus       287 ----s~anfLLl~~~~~~-----~d-------l~~~llt~~~IliRdc~~fpgLds~~~RVAv---Rt~a~N~rLlaALa  347 (349)
T TIGR01140       287 ----SRANFLLLKVERED-----VD-------LQEELLTKERILIRDCLSFPGLDSDYYRVAV---RTAAENDRLLAALA  347 (349)
T ss_pred             ----CCCCCEEEECCCCC-----HH-------HHHHHHHHCCCCHHHCCCCCCCCCCEEEEEE---CCHHHHHHHHHHHH
T ss_conf             ----88761145458986-----88-------9999987434100120578888875278885---28554789999961


Q ss_pred             H
Q ss_conf             9
Q gi|254780153|r  377 W  377 (391)
Q Consensus       377 ~  377 (391)
                      .
T Consensus       348 ~  348 (349)
T TIGR01140       348 D  348 (349)
T ss_pred             C
T ss_conf             3


No 346
>PRK07206 hypothetical protein; Provisional
Probab=43.46  E-value=23  Score=15.43  Aligned_cols=16  Identities=6%  Similarity=-0.164  Sum_probs=10.1

Q ss_pred             CCCEEEEEECCHHHHC
Q ss_conf             8614886401101102
Q gi|254780153|r  162 REGLVICDATSAVFAR  177 (391)
Q Consensus       162 ~~~llivD~vSs~g~~  177 (391)
                      .|.-+.||++|.=|-.
T Consensus       199 ~G~EysVe~vs~~G~h  214 (415)
T PRK07206        199 IGTEYVVNTVSINGNH  214 (415)
T ss_pred             CCCEEEEEEEEECCCE
T ss_conf             6857899999878968


No 347
>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=42.21  E-value=24  Score=15.31  Aligned_cols=20  Identities=20%  Similarity=0.489  Sum_probs=14.1

Q ss_pred             CCCCEEEEEECCHHHHCCCC
Q ss_conf             68614886401101102545
Q gi|254780153|r  161 SREGLVICDATSAVFARHID  180 (391)
Q Consensus       161 ~~~~llivD~vSs~g~~p~d  180 (391)
                      .+-.++|+|.++++...+++
T Consensus       102 ~~~~lvViDSi~tl~~~e~~  121 (218)
T cd01394         102 EKVDLVVVDSATALYRLELG  121 (218)
T ss_pred             CCCCEEEEECCHHHHHHHCC
T ss_conf             47729999140455455406


No 348
>PRK13972 glutathione S-transferase; Provisional
Probab=41.24  E-value=18  Score=16.04  Aligned_cols=22  Identities=14%  Similarity=0.424  Sum_probs=10.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             8999999997799999998747
Q gi|254780153|r  269 LSACVERCNANAAVLFQFIQEN  290 (391)
Q Consensus       269 l~~~~~r~~~~a~~l~~~i~~~  290 (391)
                      .....++.+...+.+++.+++.
T Consensus       126 ~~~~~~~~~~~~~~~~~~le~~  147 (215)
T PRK13972        126 IPYAIERYQVETQRLYHVLNKR  147 (215)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHH
T ss_conf             4589999999999999999998


No 349
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=39.70  E-value=26  Score=15.07  Aligned_cols=300  Identities=15%  Similarity=0.059  Sum_probs=143.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             28988999999999999999688998579997487348999875320578970799707368888876532387630674
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF  120 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~  120 (391)
                      -.|..|..+    ++-++++|+.+.   ++. +-.|.++=......++++|+. ++.|..| .-+...+...+...++..
T Consensus        50 AGs~sf~~l----~~av~d~~g~~~---v~P-tHQGRaAE~iLf~~~~k~g~~-v~~N~hF-dTTrahie~~G~~~vdl~  119 (431)
T cd00617          50 AGSKSFYDL----EDAVQDLFGFKH---IIP-THQGRGAENILFSILLKPGRT-VPSNMHF-DTTRGHIEANGAVPVDLV  119 (431)
T ss_pred             CCCCCHHHH----HHHHHHHCCCCC---EEE-CCCCHHHHHHHHHHHCCCCCE-ECCCCCC-CCHHHHHHHCCCEEEECC
T ss_conf             578028999----999998649971---247-687679999999983679988-4468787-325899997699787331


Q ss_pred             EC---------CCCCCCCHHHCC----C--CCCEEE---EEEECCCCEEEC-------CEEEECCCCCCEEEEEECCHH-
Q ss_conf             05---------777657867678----5--565799---742024202203-------203502568614886401101-
Q gi|254780153|r  121 TA---------PYGSLPDFSKVD----F--DRDVVF---VWNGTTSGVCVP-------DVGFIPESREGLVICDATSAV-  174 (391)
Q Consensus       121 ~~---------~~g~~~~~~~~~----~--~~~v~~---~h~ETstGv~~~-------~~~~~~~~~~~llivD~vSs~-  174 (391)
                      ..         |+.-..|++.++    .  ...+.+   +-...+.|- .|       ....+|+.++++++.|++=-. 
T Consensus       120 ~~ea~d~~~~~pFKGN~Dl~kLe~~i~~~g~~~I~~v~~tiTnN~~GG-QPVSm~Nir~v~~la~~~giplvlDaaRfaE  198 (431)
T cd00617         120 IDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGG-QPVSMANLREVRELAHKYGIPVVLDAARFAE  198 (431)
T ss_pred             CHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEHHHHHH
T ss_conf             500048577788488889999999998738666108999986368788-5667899999999999809979987667887


Q ss_pred             ----HH--CC----CC--------CCCCEEEEECCHHCCCCCCCCEEEEECHHHH-HHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf             ----10--25----45--------5685799970012001766515445677888-765411445778312320011232
Q gi|254780153|r  175 ----FA--RH----ID--------FNKLDVVTFSAQKVLGGEAGFGIIILSPASV-ERLEKYVPSWPLPKIFRMVKGGRV  235 (391)
Q Consensus       175 ----g~--~p----~d--------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al-~~~~~~~~~~~~~~~~~~~~~~~~  235 (391)
                          --  +|    ..        ++-.|.+++|+-|--..--| ++++++++.+ +++......               
T Consensus       199 NAyFIk~rE~gy~d~si~eI~rEmfs~aDg~tmSaKKD~~vniG-G~ia~~D~~l~~~~~~~~i~---------------  262 (431)
T cd00617         199 NAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEEARQRVVL---------------  262 (431)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCC-CEEEECCHHHHHHHHHHCCC---------------
T ss_conf             68999843530247999999999985402789970314532455-67885779999999754320---------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r  236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS  315 (391)
Q Consensus       236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~  315 (391)
                         .+-.-|+.--+.--+-++...|++..++.=+..+....+    .+-+.+.+.+.  +.+....     --++.+...
T Consensus       263 ---~EGf~TYGGlaGRD~eAlA~GL~E~~d~~yl~~Ri~qv~----yL~~~L~~~Gv--Pvv~P~G-----GHav~iDA~  328 (431)
T cd00617         263 ---YEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVR----YLGDRLDEAGV--PIVEPAG-----GHAVFIDAR  328 (431)
T ss_pred             ---CCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHH----HHHHHHHHCCC--CEECCCC-----CEEEEEEHH
T ss_conf             ---058744356325349998654075436799997799999----99999998899--6666897-----438997467


Q ss_pred             C-CCCCCHHHHHHHHHHHHHHHHHCCEEEC--CCC---CCCCC---------CEEEEECCC-CCCHHHHHHHHHHHHHHH
Q ss_conf             1-0113734567888999998886282872--665---56767---------505686158-889999999999999999
Q gi|254780153|r  316 D-IASLDINSQKSFCKSMLSFLEKEEIAYD--IGS---YRDAP---------LGLRVWVGV-TVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       316 ~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~---~r~~~---------~~~RIg~~g-~i~~~dv~~L~~aLe~~~  379 (391)
                      . +.-+  ....--...+...|..++|+-+  +|.   .|...         .-.|..+-- .-+.+.++-..++|.|+|
T Consensus       329 ~flPhi--p~~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grd~~t~e~~~~~~ElvRLAiPRRvYT~~H~dyva~~l~~l~  406 (431)
T cd00617         329 EFLPHI--PQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALY  406 (431)
T ss_pred             HHCCCC--CHHHCCHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHH
T ss_conf             746899--814391899999999970945685402002548887666788622256713502035879999999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780153|r  380 YFQK  383 (391)
Q Consensus       380 ~~~k  383 (391)
                      ++..
T Consensus       407 ~~r~  410 (431)
T cd00617         407 ERRE  410 (431)
T ss_pred             HHHH
T ss_conf             5587


No 350
>cd03148 GATase1_EcHsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31). Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31).  This group includes proteins similar to EcHsp31.  EcHsp31 has chaperone activity.  EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A.   The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. This Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain.  EcHsp31 is a homodimer.
Probab=39.30  E-value=26  Score=15.03  Aligned_cols=34  Identities=12%  Similarity=0.017  Sum_probs=16.6

Q ss_pred             EECCHHHHHHH---HHHHCCCCCEEEEECCCCCCCCHHH
Q ss_conf             70736888887---6532387630674057776578676
Q gi|254780153|r   97 AWESFGLGWMS---DIRQLSLQDVREFTAPYGSLPDFSK  132 (391)
Q Consensus        97 ~~g~~~~r~~~---~~~~~~~~~~~~~~~~~g~~~~~~~  132 (391)
                      .+|.|....+.   .+.+.| .++++.+ |.|..+..+.
T Consensus        20 ~TG~~l~Ela~Py~~f~~AG-~~VdiAS-p~Gg~~~~d~   56 (232)
T cd03148          20 STGNHPVEMLLPLYHLHAAG-FDFDVAT-LSGLPVKFEY   56 (232)
T ss_pred             CCCCCHHHHHHHHHHHHHCC-CEEEEEC-CCCCCCCCCC
T ss_conf             78789999999999999889-8299989-9999889785


No 351
>pfam01135 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
Probab=38.06  E-value=27  Score=14.90  Aligned_cols=70  Identities=16%  Similarity=0.139  Sum_probs=42.3

Q ss_pred             HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE--ECCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             999999996889985799974873489998753205789707997--07368888876532387630674057
Q gi|254780153|r   53 AIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA--WESFGLGWMSDIRQLSLQDVREFTAP  123 (391)
Q Consensus        53 ~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~--~g~~~~r~~~~~~~~~~~~~~~~~~~  123 (391)
                      +...+-+.+++..+.+|+- -|+|||=..|++..++++...++.+  .-.......+.+.+.+..++.....+
T Consensus        61 ~~a~ml~~L~l~~g~~VLe-IGtGsGY~tAlLa~l~~~~g~V~~iE~~~~l~~~A~~~l~~~~~~nV~~~~gd  132 (205)
T pfam01135        61 MHAMMLELLELKPGMRVLE-IGSGSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNLEKLGLENVIVVVGD  132 (205)
T ss_pred             HHHHHHHHCCCCCCCEEEE-ECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             9999999707899998999-66996599999999838787699983589999999999998488865898456


No 352
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=37.97  E-value=27  Score=14.90  Aligned_cols=77  Identities=19%  Similarity=0.123  Sum_probs=47.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHH-CCC--CCCEEEEECCCC-HHHHHHHHHHCC----CCCCEEEEEECCHHHHHHHHHHH
Q ss_conf             3289889999999999999996-889--985799974873-489998753205----78970799707368888876532
Q gi|254780153|r   40 SHRCVLGKERINKAIQLTRKVL-EVP--ENYRIAIVPASD-TGAVEMALWSLL----GYRGVDVLAWESFGLGWMSDIRQ  111 (391)
Q Consensus        40 sHRs~~f~~i~~~~~~~l~~l~-~~p--~~y~v~~l~Gsg-T~~~ea~~~nl~----~~~~~~~~~~g~~~~r~~~~~~~  111 (391)
                      .-|+.+|.+-++--+....... ..|  +.+++.+|+.|| ..+|.|++...+    ..|..++.+..+|.+-.-.++..
T Consensus       360 ~lr~~~F~~~~~~~~~~~~~~~~~~~~~~~~rIaIlt~GgdapGMNAAiRA~Vr~~~~~G~~v~gI~~Gf~GL~~g~i~~  439 (762)
T cd00764         360 ALRGKSFDKNWNLYKLLAIELPQPLPEKTNLNIAIVNVGAPAAGMNAAVRSAVRYGLAHGHRPYAIYDGFEGLAKGQIVE  439 (762)
T ss_pred             HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEE
T ss_conf             74377789999999986034777788667706999856889614779999999999988999999925843674798677


Q ss_pred             CCCCC
Q ss_conf             38763
Q gi|254780153|r  112 LSLQD  116 (391)
Q Consensus       112 ~~~~~  116 (391)
                      +...+
T Consensus       440 l~~~~  444 (762)
T cd00764         440 LGWID  444 (762)
T ss_pred             CCHHH
T ss_conf             78456


No 353
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=37.87  E-value=27  Score=14.89  Aligned_cols=332  Identities=13%  Similarity=0.119  Sum_probs=152.8

Q ss_pred             CCCCCCCCCCCCC-CCCCCHHHHHH---HHHHHCCCCCCC---------CHH-HHHHHHHHHHHHHHHHCCC-CCCEEEE
Q ss_conf             6468998886888-77689689999---863210365328---------988-9999999999999996889-9857999
Q gi|254780153|r    7 PTRKPKRPFFSSG-PCAKRPGWSLG---ILEGALLGRSHR---------CVL-GKERINKAIQLTRKVLEVP-ENYRIAI   71 (391)
Q Consensus         7 ~~~~p~~~~F~pG-P~~~~p~~v~~---~~~~~~l~~sHR---------s~~-f~~i~~~~~~~l~~l~~~p-~~y~v~~   71 (391)
                      -++-|...+.|.| |..+ |+ +.+   .....|+. ||.         +++ ...+++.+...+++-++-. ++--+.+
T Consensus        26 ~Lrt~g~imLggGNPa~i-Pe-m~~~f~~~~aemla-~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yGwnit~~NIal  102 (417)
T COG3977          26 GLRTPGAIMLGGGNPARI-PE-MDDYFQDLLAEMLA-SGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIAL  102 (417)
T ss_pred             HCCCCCCEEECCCCCCCC-HH-HHHHHHHHHHHHHH-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             515887156569985437-34-99999999999985-5607778754899764169999999999897578766441563


Q ss_pred             ECCCCHHHHHHHHHHCCC----CCCE--E-EEEE---CCHHHHHHH-HHHHCCCCCEEEEE-CCCCCCCCHHHCCCCCC-
Q ss_conf             748734899987532057----8970--7-9970---736888887-65323876306740-57776578676785565-
Q gi|254780153|r   72 VPASDTGAVEMALWSLLG----YRGV--D-VLAW---ESFGLGWMS-DIRQLSLQDVREFT-APYGSLPDFSKVDFDRD-  138 (391)
Q Consensus        72 l~GsgT~~~ea~~~nl~~----~~~~--~-~~~~---g~~~~r~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~-  138 (391)
                      ..||-|+-|-.  .|+++    +|+.  + +...   -+++.--.. ++---...+.+.+. .-...-+|++.+..... 
T Consensus       103 TnGSQs~fFYl--fNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~e~~  180 (417)
T COG3977         103 TNGSQSAFFYL--FNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIGEST  180 (417)
T ss_pred             CCCCCCHHHHH--HHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHCCCCCE
T ss_conf             27861158899--8875476679851046643683432655446572123552687532666662213778881336760


Q ss_pred             --EEEEEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHHHCCCC---------CCCCE-EEEECCHHCCCCCCCC
Q ss_conf             --799742024202203203-----502568614886401101102545---------56857-9997001200176651
Q gi|254780153|r  139 --VVFVWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVFARHID---------FNKLD-VVTFSAQKVLGGEAGF  201 (391)
Q Consensus       139 --v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g~~p~d---------~~~iD-v~~a~sQK~l~~ppGl  201 (391)
                        +++.--..-||-.....+     .++..+++++++|-.   .+.|++         .|+=. ++.+|-.| +|. ||.
T Consensus       181 g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnA---Yg~PFP~iifsd~~~~w~~NiilC~SLSK-~GL-PG~  255 (417)
T COG3977         181 GAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNA---YGVPFPGIIFSDATPLWNENIILCMSLSK-LGL-PGS  255 (417)
T ss_pred             EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC---CCCCCCCEECCCCCCCCCCCEEEEEEHHH-CCC-CCC
T ss_conf             2699647889887736488999899874223896797356---67997862003564156787788831433-489-873


Q ss_pred             --EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             --544567788876541144577831232001123210334786446664488999999998620103189999999977
Q gi|254780153|r  202 --GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNAN  279 (391)
Q Consensus       202 --~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~  279 (391)
                        ++++..++.+......+.--      ++            .....-|++..=..-.-.|..+-++. +.-.   ++.+
T Consensus       256 R~GIiIane~viqaitnmn~ii------sL------------ap~~~G~Aiaa~mie~gdl~rlseqV-IrPF---Y~~~  313 (417)
T COG3977         256 RCGIIIANEKVIQAITNMNGII------SL------------APGRMGPAIAAEMIESGDLLRLSEQV-IRPF---YRNR  313 (417)
T ss_pred             EEEEEECCHHHHHHHHHCCCEE------EE------------CCCCCCHHHHHHHHHCCHHHHHHHHH-HHHH---HHHH
T ss_conf             0357962699999997114535------31------------67875689999886024288899986-4388---8988


Q ss_pred             HHHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC---------C
Q ss_conf             99999998747-9716766882003653178982473101137345678889999988862828726655---------6
Q gi|254780153|r  280 AAVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY---------R  349 (391)
Q Consensus       280 a~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---------r  349 (391)
                      .+..-..+.+. +-...+..+++-.-  -.-+-+.|=          -.-...+.++|.++|+++=.|.|         .
T Consensus       314 ~q~~~~~l~~~lp~~~~~iHkpEGAI--FlWLWf~dL----------PItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewp  381 (417)
T COG3977         314 VQTTIAILRRYLPEYRCLIHKPEGAI--FLWLWFKDL----------PITTEELYQRLKARGVLMVPGHYFFPGLDKEWP  381 (417)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCE--EEHHHHCCC----------CCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCC
T ss_conf             99999999986577652542687515--413355358----------766899999998686899446324789998887


Q ss_pred             CCCCEEEEECCCCCC--HHHHHHHHHHHHHHHHHH
Q ss_conf             767505686158889--999999999999999999
Q gi|254780153|r  350 DAPLGLRVWVGVTVE--KEDLLLLCDWLRWVFYFQ  382 (391)
Q Consensus       350 ~~~~~~RIg~~g~i~--~~dv~~L~~aLe~~~~~~  382 (391)
                      -..-.+|++.-+.-+  +..|..|.+.+|.+|++.
T Consensus       382 H~hqC~Rmn~~~~~e~ie~Gva~lae~ve~~yq~~  416 (417)
T COG3977         382 HTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQEV  416 (417)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             61224787536987999999999999999997407


No 354
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=37.86  E-value=27  Score=14.88  Aligned_cols=182  Identities=18%  Similarity=0.125  Sum_probs=97.4

Q ss_pred             HHHHHHHHCCCCCCCC----HHHHHHHHHHHHHH-HHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf             9998632103653289----88999999999999-999688998-57999748734899987532057897079970736
Q gi|254780153|r   28 SLGILEGALLGRSHRC----VLGKERINKAIQLT-RKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF  101 (391)
Q Consensus        28 v~~~~~~~~l~~sHRs----~~f~~i~~~~~~~l-~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~  101 (391)
                      ||++....-.+-||-.    .-+.++=.+..+++ .++|++... -++-|+  |||-++..++..+++|||.++.+.|.=
T Consensus        40 VL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~i--sGTHAI~~aLfg~LRpgDell~i~G~P  117 (416)
T COG4100          40 VLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQII--SGTHAIACALFGILRPGDELLYITGSP  117 (416)
T ss_pred             HHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE--CCHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf             999998543530025788877765322667999999985541002310552--360299999984268887477752886


Q ss_pred             HHHHHHHHHHCCCCCEEEE-E----------CCCCCCCCHHHCC--CCCCEEEEEEECCCCEEEC-CE------EEE---
Q ss_conf             8888876532387630674-0----------5777657867678--5565799742024202203-20------350---
Q gi|254780153|r  102 GLGWMSDIRQLSLQDVREF-T----------APYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVP-DV------GFI---  158 (391)
Q Consensus       102 ~~r~~~~~~~~~~~~~~~~-~----------~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~-~~------~~~---  158 (391)
                      ..-.-+.+--++ ...-.+ +          ...|++ |-..+.  .....-+++.--|.|-... ..      +.+   
T Consensus       118 YDTLeevIG~rg-~~~gSL~dfgi~Y~~v~Lt~~gki-D~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~v  195 (416)
T COG4100         118 YDTLEEVIGLRG-EGQGSLKDFGIKYKAVPLTADGKI-DIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFV  195 (416)
T ss_pred             CHHHHHHHCCCC-CCCCCHHHHCCCEEECCCCCCCCC-CHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf             056898756277-785427873855002135668823-389998750855259999732576778864299999999999


Q ss_pred             -CCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCC----EEEEECHHHHHHHH
Q ss_conf             -256861488640110110254556--8579997001200176651----54456778887654
Q gi|254780153|r  159 -PESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGF----GIIILSPASVERLE  215 (391)
Q Consensus       159 -~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl----~~v~~s~~al~~~~  215 (391)
                       ....+.++.||-.=.=..+.....  +.|++..|-=||-||  |+    +.+.-+.+..+.+.
T Consensus       196 k~inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGG--giaktGGYiaGk~~~ve~~~  257 (416)
T COG4100         196 KEINPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGG--GIAKTGGYIAGKAELVEAAA  257 (416)
T ss_pred             HHCCCCEEEEEECCCHHHHHCCCCCCCCHHHHCCCEEECCCC--CEEECCCEEECHHHHHHHHC
T ss_conf             844997799980563655411486300533420321327998--66511645524688987641


No 355
>pfam04048 Sec8_exocyst Sec8 exocyst complex component specific domain.
Probab=37.81  E-value=28  Score=14.88  Aligned_cols=34  Identities=21%  Similarity=0.249  Sum_probs=18.3

Q ss_pred             HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             9986321036532898899999999999999968
Q gi|254780153|r   29 LGILEGALLGRSHRCVLGKERINKAIQLTRKVLE   62 (391)
Q Consensus        29 ~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~   62 (391)
                      ++-|...-+|..||-++|.++.+.+...|+.+-+
T Consensus        28 L~llD~sSvG~a~~~~~F~~~~~~i~~~L~~vV~   61 (142)
T pfam04048        28 LQLLDDTSVGLAHRYPEFEQLKKQIEQALQEVVN   61 (142)
T ss_pred             HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             9880845656532336799999999999999999


No 356
>PRK13534 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional
Probab=37.54  E-value=28  Score=14.85  Aligned_cols=95  Identities=13%  Similarity=0.060  Sum_probs=54.1

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-CCCC---CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf             7655646899888688877689689999863210-3653---28988999999999999999688998579997487348
Q gi|254780153|r    3 DMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGAL-LGRS---HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG   78 (391)
Q Consensus         3 ~~~~~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~-l~~s---HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~   78 (391)
                      ..+-|.++|. .|  |----+.|+. ++.++..+ |-.|   ++++...+.-.  ..+|+++++.+.    .+|+-||+.
T Consensus        22 ~ieTP~~~PV-in--p~~~~i~p~e-l~~~G~~~iITNsYi~~~~~~~~~~a~--~~GlH~~l~~dg----~ImTDSG~f   91 (630)
T PRK13534         22 KIETPTIMPV-IN--PKKQTVDPKE-LKKMGFDIVITNSYIIYKNPELREKAL--EKGIHSLIDFDG----PIMTDSGSF   91 (630)
T ss_pred             CEECCCCCCC-CC--CCCCCCCHHH-HHHCCCCEEEEEEEEEEECCCHHHHHH--HHCHHHHCCCCC----CEEECCCCE
T ss_conf             2646831020-46--5536349999-986186589750057750762346666--404798718998----579778863


Q ss_pred             HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             999875320578970799707368888876532387630674
Q gi|254780153|r   79 AVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF  120 (391)
Q Consensus        79 ~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~  120 (391)
                      |.       ..-|++.      ...+-.-++++.-+.|+...
T Consensus        92 Q~-------~~yG~ve------v~~~eiv~fQ~~IGsDI~~~  120 (630)
T PRK13534         92 QL-------SVYGDVE------VTNREIIEFQEKIGVDIGTI  120 (630)
T ss_pred             EE-------EEECCEE------ECHHHHHHHHHHHCCCEEEE
T ss_conf             77-------7737662------06999999999857998887


No 357
>pfam10100 DUF2338 Uncharacterized protein conserved in bacteria (DUF2338). Members of this family of hypothetical bacterial proteins have no known function.
Probab=36.75  E-value=29  Score=14.77  Aligned_cols=111  Identities=18%  Similarity=0.197  Sum_probs=57.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHH----------------------HHHHHHHHCCCCCCE
Q ss_conf             8688877689689999863210365----32898899999999----------------------999999968899857
Q gi|254780153|r   15 FFSSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKA----------------------IQLTRKVLEVPENYR   68 (391)
Q Consensus        15 ~F~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~----------------------~~~l~~l~~~p~~y~   68 (391)
                      -+|.||+.+.-...+.+-....+|+    |-||..|.+-++..                      ..-.+.+-.+-++|.
T Consensus         6 i~GtGPvaIQLAv~~~~~~~~~vgi~~R~S~rs~~f~e~l~~~~~~~~~~vqn~~h~~~~G~~~id~~~~~~~~i~g~Wd   85 (429)
T pfam10100         6 ILGTGPVAIQLAVDLKLHGDARLGIAGRPSTRSKRLFEALARTDTLFLVGTQNEQHQQLEGKCTIDCFIKDYATIVGDWD   85 (429)
T ss_pred             EECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCEEHHHHHCCHHHHCCCCC
T ss_conf             96377799999999985237455453275355799999997377679861022456764471562454137988515133


Q ss_pred             EEEECCCCHHHHHHHHHH----CCCCCCEEEEEECCHHHHHH-HHHHHCCCCCEEEE--ECCCCC
Q ss_conf             999748734899987532----05789707997073688888-76532387630674--057776
Q gi|254780153|r   69 IAIVPASDTGAVEMALWS----LLGYRGVDVLAWESFGLGWM-SDIRQLSLQDVREF--TAPYGS  126 (391)
Q Consensus        69 v~~l~GsgT~~~ea~~~n----l~~~~~~~~~~~g~~~~r~~-~~~~~~~~~~~~~~--~~~~g~  126 (391)
                      .++|...+ -+--.++.+    .+..=+.+++++-.||.... +.+....+.+++++  +.-+|.
T Consensus        86 tlILavta-DaY~~VL~qi~~~~L~~vk~iILvSPt~GS~~lv~~~l~~~~~~~eVISfStY~gd  149 (429)
T pfam10100        86 TLILAVTA-DAYYDVLQQIPWETLKRVKCVILISPTFGSNLLVQNFLNALNKDAEVISFSTYYGD  149 (429)
T ss_pred             EEEEEEEH-HHHHHHHHCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             79999521-87899997079988704777999766644079999999855998169985300364


No 358
>TIGR00462 genX lysyl-tRNA synthetase homolog GenX; InterPro: IPR004525   The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases .   This entry represents lysyl-tRNA synthetases from bacteria, as well as other related proteins. Escherichia coli, Haemophilus influenzae, and Aquifex aeolicus each have a protein closely homologous to the C-terminal region of lysyl-tRNA synthetase (LysS). Multiple sequence alignment of these proteins with the homologous regions of collected LysS proteins shows that these proteins form a distinct set rather than just similar truncations of LysS, so they appear to be orthologous. The protein is termed PoxA or GenX after its designation in E. coli. Its function is unknown.; GO: 0000166 nucleotide binding, 0004824 lysine-tRNA ligase activity, 0005524 ATP binding, 0006412 translation, 0006430 lysyl-tRNA aminoacylation, 0005737 cytoplasm.
Probab=34.16  E-value=31  Score=14.51  Aligned_cols=23  Identities=26%  Similarity=0.260  Sum_probs=12.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             98899999999999999968899
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPE   65 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~   65 (391)
                      ..++..+++|+...|.++|+.|.
T Consensus       126 ~~d~~~Li~E~~~LL~~~ld~~~  148 (330)
T TIGR00462       126 HYDMLRLINEVDDLLQQLLDCPE  148 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             02389999999999999728863


No 359
>TIGR00763 lon ATP-dependent protease La; InterPro: IPR004815   Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes . They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence . Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases .   Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base . The geometric orientations of the catalytic residues are similar between families, despite different protein folds . The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) , .   Peptidases are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins.   Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule.    This signature defines the bacterial and eukaryotic lon proteases, which are ATP-dependent serine peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SF). This family of sequences does not include the archaeal lon homologs, IPR004663 from INTERPRO. In the eukaryotes the majority of the proteins are located in the mitochondrial matrix , . In yeast, Pim1, is located in the mitochondrial matrix, is required for mitochondrial function, is constitutively expressed but is increased after thermal stress, suggesting that Pim1 may play a role in the heat shock response .; GO: 0004176 ATP-dependent peptidase activity, 0005524 ATP binding, 0006510 ATP-dependent proteolysis.
Probab=33.50  E-value=14  Score=16.75  Aligned_cols=86  Identities=16%  Similarity=0.123  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHH-----C--------CC--CCCCCHHHHHHHHHHH----HHHH-HHHCCCCC-CEEE--EECCCCHHHHH
Q ss_conf             68999986321-----0--------36--5328988999999999----9999-99688998-5799--97487348999
Q gi|254780153|r   25 PGWSLGILEGA-----L--------LG--RSHRCVLGKERINKAI----QLTR-KVLEVPEN-YRIA--IVPASDTGAVE   81 (391)
Q Consensus        25 p~~v~~~~~~~-----~--------l~--~sHRs~~f~~i~~~~~----~~l~-~l~~~p~~-y~v~--~l~GsgT~~~e   81 (391)
                      |+.++++|...     +        |+  .|||+.++..|++=.=    .... -++++|=| ..|+  |+. +| -.++
T Consensus       504 PGriiQ~lk~~~t~NPl~LlDEIDK~~~~~~~~GDPaSALLEvLDPEQN~~F~DHYldvp~DLS~V~CyFi~-TA-N~~d  581 (941)
T TIGR00763       504 PGRIIQGLKKAKTKNPLILLDEIDKIGLKSSFRGDPASALLEVLDPEQNNAFSDHYLDVPFDLSKVLCYFIA-TA-NSID  581 (941)
T ss_pred             HHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHEEE-CC-CCCC
T ss_conf             257899987604158806862022001678865563788864128643604255300234004200210002-44-7576


Q ss_pred             HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCC
Q ss_conf             87532057897079970736888887653238
Q gi|254780153|r   82 MALWSLLGYRGVDVLAWESFGLGWMSDIRQLS  113 (391)
Q Consensus        82 a~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~  113 (391)
                      .+|.=|+ +.-.++-++|+-.+.=..++.++-
T Consensus       582 ~IP~PLL-DRMEvI~lsGY~~~EK~~IA~~yL  612 (941)
T TIGR00763       582 TIPRPLL-DRMEVIELSGYTEEEKLEIAKKYL  612 (941)
T ss_pred             CCCCCCC-CCEEEEECCCCCHHHHHHHHHHCC
T ss_conf             7772213-740245238887678999998547


No 360
>pfam01209 Ubie_methyltran ubiE/COQ5 methyltransferase family.
Probab=33.48  E-value=32  Score=14.44  Aligned_cols=55  Identities=18%  Similarity=0.128  Sum_probs=30.5

Q ss_pred             HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf             9999999688998579997487348999875320578970799707368888876532
Q gi|254780153|r   54 IQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQ  111 (391)
Q Consensus        54 ~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~  111 (391)
                      ++.+.+.++.+.+..|+= -|+|||-+...+.....+...++.+  .++....+.+.+
T Consensus        36 R~~~v~~~~~~~g~~vLD-l~cGTG~~~~~l~~~~~~~~~v~gv--D~S~~ML~~a~~   90 (233)
T pfam01209        36 KDFTMKCMGVKRGNKFLD-VAGGTGDWTFGLSDSAGSSGKVVGL--DINENMLKEGEK   90 (233)
T ss_pred             HHHHHHHCCCCCCCEEEE-ECCCCCHHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHH
T ss_conf             999998618999998998-2540588999999984999749999--699999999999


No 361
>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632   Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families.    This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=33.44  E-value=32  Score=14.44  Aligned_cols=206  Identities=17%  Similarity=0.083  Sum_probs=120.7

Q ss_pred             CEEEEEEECCCC---EEECCEE------EECCCCCCEEEEEECCHHHHC--------CCCCCCC--EEEEECCHHCCCC-
Q ss_conf             579974202420---2203203------502568614886401101102--------5455685--7999700120017-
Q gi|254780153|r  138 DVVFVWNGTTSG---VCVPDVG------FIPESREGLVICDATSAVFAR--------HIDFNKL--DVVTFSAQKVLGG-  197 (391)
Q Consensus       138 ~v~~~h~ETstG---v~~~~~~------~~~~~~~~llivD~vSs~g~~--------p~d~~~i--Dv~~a~sQK~l~~-  197 (391)
                      .|+.+=.|=..|   -..|..+      ..|+++++.+|.|=|++=.++        .++.+++  |.+  +.-|.|.. 
T Consensus       200 ~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQtGFARTG~~FA~eH~~~dGl~PDLi--t~aKslA~G  277 (427)
T TIGR00700       200 NVAAVVIEPVQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQTGFARTGKLFAIEHYDDDGLKPDLI--TVAKSLADG  277 (427)
T ss_pred             CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCEEEEECCCCCCCCCHH--HHHHHHHCC
T ss_conf             043789732247887333858899999997543875899725456800002112541006788875188--786677356


Q ss_pred             CCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             66515445677888765411445778312320011232103347864466644889999999986201031899999999
Q gi|254780153|r  198 EAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCN  277 (391)
Q Consensus       198 ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~  277 (391)
                      -| ||-|+-+-+.      +.                +-.-..-|.|+.=-|+ .+.|...+|+.|+++ ||   .+|.+
T Consensus       278 lP-LSgV~GrAei------md----------------ApapGgLGGTyaGnPl-acAAAlAvl~iIe~e-gL---~ERa~  329 (427)
T TIGR00700       278 LP-LSGVVGRAEI------MD----------------APAPGGLGGTYAGNPL-ACAAALAVLDIIEEE-GL---IERAE  329 (427)
T ss_pred             CC-CCHHHCCHHH------CC----------------CCCCCCCCCCCCCCHH-HHHHHHHHHHHHCCC-CH---HHHHH
T ss_conf             86-2111044121------16----------------8888888775568879-999999999863113-12---47899


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEE
Q ss_conf             77999999987479716766882003653178982473101137345678889999988862828726655676750568
Q gi|254780153|r  278 ANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRV  357 (391)
Q Consensus       278 ~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RI  357 (391)
                      +..+.+.|.+-...-..+++.+-..+..|.-+=.++||...+-+    ......+.++-..+|.++-+-|-  -|+.||.
T Consensus       330 qig~~~~d~l~~~k~~~p~IgdvRglGaMiAvE~vkdp~T~EPd----a~~a~~ia~~A~a~GlllLTcG~--~GNiIRf  403 (427)
T TIGR00700       330 QIGKLVKDKLIELKEEVPAIGDVRGLGAMIAVELVKDPDTTEPD----AALAEKIAAAALAAGLLLLTCGI--YGNIIRF  403 (427)
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCC----HHHHHHHHHHHHHCCHHHHHCCH--HCCHHHH
T ss_conf             98788988888887606721112026335788865488788831----79999999999756822123030--1155543


Q ss_pred             ECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             6158889999999999999999
Q gi|254780153|r  358 WVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       358 g~~g~i~~~dv~~L~~aLe~~~  379 (391)
                      =.==.|.++-++.-++-|+..+
T Consensus       404 L~PLtI~D~ll~egl~Il~a~L  425 (427)
T TIGR00700       404 LTPLTISDELLDEGLDILEAAL  425 (427)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH
T ss_conf             4886546788988999999985


No 362
>TIGR00954 3a01203 Peroxysomal long chain fatty acyl transporter; InterPro: IPR005283   ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs.   ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain .    The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyze ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarize the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site , , .   The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis , , , , , .   Proteins known to belong to this family are classified in several functional subfamilies depending on the substrate used (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1).     The members of this family are integral membrane proteins and they are involved in the import of activated long-chain fatty acids from the cytosol to the peroxisomal matrix. ; GO: 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane.
Probab=33.40  E-value=17  Score=16.23  Aligned_cols=27  Identities=0%  Similarity=-0.253  Sum_probs=15.6

Q ss_pred             CCCEEEEECCHHCCC-----CCCCCEEEEECH
Q ss_conf             685799970012001-----766515445677
Q gi|254780153|r  182 NKLDVVTFSAQKVLG-----GEAGFGIIILSP  208 (391)
Q Consensus       182 ~~iDv~~a~sQK~l~-----~ppGl~~v~~s~  208 (391)
                      ++-.+++.|.+=|=-     .-+||.++...+
T Consensus       555 sG~~lLi~GPNGCGKSSLFRiLGeLWP~~g~~  586 (788)
T TIGR00954       555 SGNHLLICGPNGCGKSSLFRILGELWPVYGKN  586 (788)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf             88766876889986478999986430235789


No 363
>smart00828 PKS_MT Methyltransferase  in polyketide synthase (PKS) enzymes.
Probab=32.97  E-value=33  Score=14.39  Aligned_cols=37  Identities=11%  Similarity=0.095  Sum_probs=25.5

Q ss_pred             CCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCC
Q ss_conf             56861488640110110254556857999700120017
Q gi|254780153|r  160 ESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGG  197 (391)
Q Consensus       160 ~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~  197 (391)
                      +..|.+++.|.++.. .-|++..+.+..+.+.++....
T Consensus        95 KPGG~lviaD~~~n~-~~~i~~~~~~~~~~t~~eW~~l  131 (224)
T smart00828       95 KDGGHLVLADFIANL-LSAIEHEETTSYLVTREEWAEL  131 (224)
T ss_pred             CCCEEEEEEEEECCC-CCCCCCCCCCCCCCCHHHHHHH
T ss_conf             798499999853378-8877787630024789999999


No 364
>pfam00996 GDI GDP dissociation inhibitor.
Probab=32.86  E-value=33  Score=14.38  Aligned_cols=41  Identities=24%  Similarity=0.229  Sum_probs=24.0

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHCCC-CCCEEEE--EECCHHHHHHH
Q ss_conf             99857999748734899987532057-8970799--70736888887
Q gi|254780153|r   64 PENYRIAIVPASDTGAVEMALWSLLG-YRGVDVL--AWESFGLGWMS  107 (391)
Q Consensus        64 p~~y~v~~l~GsgT~~~ea~~~nl~~-~~~~~~~--~~g~~~~r~~~  107 (391)
                      |+.|.|+++   |||--|.++.-+++ .|.+++-  .|.++|+.|+.
T Consensus         2 ~eeyDVIIl---GTGL~EsILaaaLS~~GKkVLHiDrN~yYGg~~AS   45 (439)
T pfam00996         2 DEEYDVIVL---GTGLKECILSGLLSVDGKKVLHIDRNDYYGGESAS   45 (439)
T ss_pred             CCCEEEEEE---CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
T ss_conf             985029997---99879999999997369989997799877863015


No 365
>TIGR02478 6PF1K_euk 6-phosphofructokinase; InterPro: IPR009161    Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (2.7.1.11 from EC) in which two tandem copies of the phosphofructokinase are found . Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).   Phosphofructokinase (PFK) catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate, which then enters the Embden-Meyerhof pathway. PFK is a key regulatory enzyme in glycolysis.   For additional information please see , , .; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005737 cytoplasm.
Probab=31.87  E-value=34  Score=14.28  Aligned_cols=160  Identities=18%  Similarity=0.177  Sum_probs=83.7

Q ss_pred             CCCHHHHHHHH---HHHHHHHHHHCCC--C---CCEEEEECCCC-HHHHHHHHHHCC----CCCCEEEEEECCHHHHHHH
Q ss_conf             28988999999---9999999996889--9---85799974873-489998753205----7897079970736888887
Q gi|254780153|r   41 HRCVLGKERIN---KAIQLTRKVLEVP--E---NYRIAIVPASD-TGAVEMALWSLL----GYRGVDVLAWESFGLGWMS  107 (391)
Q Consensus        41 HRs~~f~~i~~---~~~~~l~~l~~~p--~---~y~v~~l~Gsg-T~~~ea~~~nl~----~~~~~~~~~~g~~~~r~~~  107 (391)
                      =|+.+|.+-++   .+-.-.+.=...|  +   +|+|.+++=|| .++|.++++.++    .+|..++-+.++|.+-...
T Consensus       369 LRg~eF~~~~~~~~~~s~~~~~~~~~~~~~~r~~~R~AIihvGAPA~GMNaA~R~avr~~~~~Gh~v~aI~nGf~GL~~~  448 (777)
T TIGR02478       369 LRGREFVENLATFLELSKPDQDKKLVPSKADRLNLRVAIIHVGAPAGGMNAATRAAVRYALARGHTVIAIHNGFSGLARG  448 (777)
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCC
T ss_conf             35723577544477620337888677754356742079996488853023999999999850698799981684100228


Q ss_pred             H-------HHHCCCCCEEEEECCCCCCC-CHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEECCHHHHC-C
Q ss_conf             6-------53238763067405777657-8676785565799742024202203203502568614886401101102-5
Q gi|254780153|r  108 D-------IRQLSLQDVREFTAPYGSLP-DFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFAR-H  178 (391)
Q Consensus       108 ~-------~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~vSs~g~~-p  178 (391)
                      +       +.++...||.-.....|... .--++|...++-    ++...       +-.+.=+.|+||=+=.+|-+. .
T Consensus       449 ~DDtPicsvrEL~W~dV~gW~~~GGS~lGTnR~lP~~~d~~----~iA~~-------f~~~kiDgL~IIGGFEAf~al~q  517 (777)
T TIGR02478       449 DDDTPICSVRELTWSDVEGWVGEGGSELGTNRELPNGKDLG----EIAYK-------FQKHKIDGLLIIGGFEAFEALLQ  517 (777)
T ss_pred             CCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHH----HHHHH-------HHHCCCCEEEEECCHHHHHHHHH
T ss_conf             88974331222023444233428876216778977865389----99999-------98609887999760368899999


Q ss_pred             CCC-------CCCEEEE--ECCHHCCCCCCCCEEEEECHHHHHHH
Q ss_conf             455-------6857999--70012001766515445677888765
Q gi|254780153|r  179 IDF-------NKLDVVT--FSAQKVLGGEAGFGIIILSPASVERL  214 (391)
Q Consensus       179 ~d~-------~~iDv~~--a~sQK~l~~ppGl~~v~~s~~al~~~  214 (391)
                      ++.       =.|=++.  |.--=|.   ||.-+=+-++-||..+
T Consensus       518 L~~aR~~YP~F~IPmv~iPATISNNV---PGTe~SLG~DTaLN~i  559 (777)
T TIGR02478       518 LEQAREKYPAFRIPMVVIPATISNNV---PGTEYSLGSDTALNEI  559 (777)
T ss_pred             HHHHHHHCCCCCCCEEEECCEEECCC---CCCCCHHHHHHHHHHH
T ss_conf             99998618855788578666010778---7244302201577789


No 366
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=31.34  E-value=35  Score=14.22  Aligned_cols=38  Identities=11%  Similarity=0.166  Sum_probs=27.5

Q ss_pred             HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             9996889985799974873489998753205789707997
Q gi|254780153|r   58 RKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        58 ~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      .++|++.+  ++++++|+++|-=-++...|.+.|..+++.
T Consensus         2 ~~~~~L~g--K~alVTG~~~GIG~aiA~~la~~Ga~Vvi~   39 (254)
T PRK08085          2 NDLFSLAG--KNILITGSAQGIGFLLATGLAEYGAEIIIN   39 (254)
T ss_pred             CCCCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             96728999--989996856789999999999869999999


No 367
>PRK08317 hypothetical protein; Provisional
Probab=31.32  E-value=35  Score=14.22  Aligned_cols=47  Identities=21%  Similarity=0.101  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             999999999996889985799974873489998753205789707997
Q gi|254780153|r   50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      +..-++.+-+.+++..+.+|+=+ |.|||.+...+...++++..++.+
T Consensus         4 ~~~~r~~~l~~L~l~pG~~vLDi-GcG~G~~~~~la~~~g~~~~v~gv   50 (241)
T PRK08317          4 FRRYRARTFELLAVQPGERVLDV-GCGPGNDLRELADRVGPEGRVVGI   50 (241)
T ss_pred             HHHHHHHHHHHCCCCCCCEEEEE-CCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf             68999999973699997999996-641749999999974999789999


No 368
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297   LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=29.62  E-value=20  Score=15.72  Aligned_cols=39  Identities=10%  Similarity=0.150  Sum_probs=19.9

Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECC-CCHH---HHHHHHHHCCC
Q ss_conf             9999999999968899857999748-7348---99987532057
Q gi|254780153|r   50 INKAIQLTRKVLEVPENYRIAIVPA-SDTG---AVEMALWSLLG   89 (391)
Q Consensus        50 ~~~~~~~l~~l~~~p~~y~v~~l~G-sgT~---~~ea~~~nl~~   89 (391)
                      .++++..+..++|+... +++..+| +|.|   -+|+++--...
T Consensus       140 pe~v~~eIe~~iGld~~-~ai~~SAKtG~Gi~e~LEaIv~~vPp  182 (598)
T TIGR01393       140 PERVKKEIEEVIGLDAS-EAILASAKTGIGIEEILEAIVKRVPP  182 (598)
T ss_pred             HHHHHHHHHHHCCCCCC-CCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf             58999987654188964-30387503678889998897101810


No 369
>KOG1201 consensus
Probab=29.56  E-value=37  Score=14.03  Aligned_cols=162  Identities=16%  Similarity=0.139  Sum_probs=78.6

Q ss_pred             HHHHHHHHHHHHHHHCCCC---CCEEEEECCCCHHHHHHHHHHCCCCCCEEE-EEECCHH-HHHHHHHHHCCCCCEEEEE
Q ss_conf             9999999999999968899---857999748734899987532057897079-9707368-8888765323876306740
Q gi|254780153|r   47 KERINKAIQLTRKVLEVPE---NYRIAIVPASDTGAVEMALWSLLGYRGVDV-LAWESFG-LGWMSDIRQLSLQDVREFT  121 (391)
Q Consensus        47 ~~i~~~~~~~l~~l~~~p~---~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~-~~~g~~~-~r~~~~~~~~~~~~~~~~~  121 (391)
                      ..++....+.+..++.-|.   .-++++++|||+|-=-+++..+.+.+.+++ ...+..+ ....+++++.+  .+..+.
T Consensus        15 ~~~~~~~~s~~~~~l~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g--~~~~y~   92 (300)
T KOG1201          15 LLLLALLESLIKLLLPKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG--EAKAYT   92 (300)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCC--CEEEEE
T ss_conf             999999999998755543344069889996898607899999999707848999556512399999998448--525899


Q ss_pred             CCCCCCCCHHH----C-CCCCCEEEEEEECCCCEEEC--C----EEEECC--CCCCEEEEEECCHHHHCCCCCCCCEEEE
Q ss_conf             57776578676----7-85565799742024202203--2----035025--6861488640110110254556857999
Q gi|254780153|r  122 APYGSLPDFSK----V-DFDRDVVFVWNGTTSGVCVP--D----VGFIPE--SREGLVICDATSAVFARHIDFNKLDVVT  188 (391)
Q Consensus       122 ~~~g~~~~~~~----~-~~~~~v~~~h~ETstGv~~~--~----~~~~~~--~~~~llivD~vSs~g~~p~d~~~iDv~~  188 (391)
                      .+-....+...    + ++..++.+.=|.  -|+...  .    .+.+.+  +-+.+--...++.|.=.-++-++--++-
T Consensus        93 cdis~~eei~~~a~~Vk~e~G~V~ILVNN--AGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~  170 (300)
T KOG1201          93 CDISDREEIYRLAKKVKKEVGDVDILVNN--AGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVT  170 (300)
T ss_pred             ECCCCHHHHHHHHHHHHHHCCCCEEEEEC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             55898899999999999861995499836--6424488756799899999998766899999998738887457963998


Q ss_pred             ECCHHCCCCCCCCEEEEECHHHHH
Q ss_conf             700120017665154456778887
Q gi|254780153|r  189 FSAQKVLGGEAGFGIIILSPASVE  212 (391)
Q Consensus       189 a~sQK~l~~ppGl~~v~~s~~al~  212 (391)
                      -+|-=++.++||++.=+.|+-|..
T Consensus       171 IaS~aG~~g~~gl~~YcaSK~a~v  194 (300)
T KOG1201         171 IASVAGLFGPAGLADYCASKFAAV  194 (300)
T ss_pred             EHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf             355331357765323565189999


No 370
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=28.31  E-value=39  Score=13.89  Aligned_cols=63  Identities=6%  Similarity=-0.003  Sum_probs=37.9

Q ss_pred             HHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE--CCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             999968899857999748734899987532057897079970--736888887653238763067405
Q gi|254780153|r   57 TRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAW--ESFGLGWMSDIRQLSLQDVREFTA  122 (391)
Q Consensus        57 l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~--g~~~~r~~~~~~~~~~~~~~~~~~  122 (391)
                      +.++|++.+  ++++++|++.+-=.++..-|.+.|-.+++..  -.-.++..+++.+.++ .+..+..
T Consensus         2 m~~lf~L~g--KvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~-~~~~~~~   66 (278)
T PRK08277          2 MNNLFSLKG--KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVEEIKANGG-EAIALKA   66 (278)
T ss_pred             CCCCCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCC-EEEEEEC
T ss_conf             400638899--9899958674899999999998799899997988999999999984599-0999982


No 371
>TIGR00928 purB adenylosuccinate lyase; InterPro: IPR004769 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown ,  to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes.   Adenylosuccinate lyase is involved in purine ribonucleotide biosynthesis.; GO: 0004018 adenylosuccinate lyase activity, 0009152 purine ribonucleotide biosynthetic process.
Probab=28.03  E-value=33  Score=14.38  Aligned_cols=46  Identities=17%  Similarity=0.194  Sum_probs=35.6

Q ss_pred             HCCCCCCC--------CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf             10365328--------988999999999999999688998579997487348999875
Q gi|254780153|r   35 ALLGRSHR--------CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMAL   84 (391)
Q Consensus        35 ~~l~~sHR--------s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~   84 (391)
                      .|+|++|=        +..|---.+|++.++++|-++++...+    |+.+|++-+..
T Consensus       156 ~m~GRTHGq~A~PtT~G~~~A~w~~E~~R~~~rL~~~~~~~~v----g~i~Ga~GT~a  209 (469)
T TIGR00928       156 VMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLKQAKERIKV----GGISGAVGTYA  209 (469)
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCCCCHHH
T ss_conf             8841357824344869999999999999999999988861665----74225421476


No 372
>TIGR02442 Cob-chelat-sub cobaltochelatase subunit; InterPro: IPR012804   Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in Salmonella typhimurium) , . The corresponding cobalt chelatases are not homologous.   Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (IPR010388 from INTERPRO). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis, (IPR011953 from INTERPRO, IPR006537 from INTERPRO, IPR006538 from INTERPRO) .    The two pathways differ in the point of cobalt insertion during corrin ring formation . There are apparently a number of variations on these two pathways, where the major differences seem to be concerned with the process of ring contraction .   Cobaltochelatase shows similarities with magnesium chelatase, which is also a complex ATP-dependent enzyme made up of two separable components. However, unlike the situation in cobaltochelatase, one of these two components is membrane bound in magnesium chelatase . .
Probab=27.82  E-value=25  Score=15.12  Aligned_cols=43  Identities=16%  Similarity=0.251  Sum_probs=24.3

Q ss_pred             CEEEEEECCHHHHC-CCCC----------------CCCEEEEE-CCHHCCCCCCCCEEEEE
Q ss_conf             14886401101102-5455----------------68579997-00120017665154456
Q gi|254780153|r  164 GLVICDATSAVFAR-HIDF----------------NKLDVVTF-SAQKVLGGEAGFGIIIL  206 (391)
Q Consensus       164 ~llivD~vSs~g~~-p~d~----------------~~iDv~~a-~sQK~l~~ppGl~~v~~  206 (391)
                      ++|||||+.|++++ .|..                +++.+|-| +.+=.+.+||=-++-.+
T Consensus       511 viFvVDASGSM~ar~RM~~~KGavLsLL~DAYq~RDkValI~FrG~~AevlLPPT~sv~~A  571 (688)
T TIGR02442       511 VIFVVDASGSMAARGRMAAAKGAVLSLLRDAYQKRDKVALITFRGEEAEVLLPPTSSVELA  571 (688)
T ss_pred             EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCHHHHH
T ss_conf             2235335320442357899899999988888862776888623673435765878848999


No 373
>pfam06070 Herpes_UL32 Herpesvirus large structural phosphoprotein UL32. The large phosphorylated protein (UL32-like) of herpes viruses is the polypeptide most frequently reactive in immuno-blotting analyses with antisera when compared with other viral proteins.
Probab=27.70  E-value=40  Score=13.83  Aligned_cols=20  Identities=10%  Similarity=0.076  Sum_probs=6.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q ss_conf             28988999999999999999
Q gi|254780153|r   41 HRCVLGKERINKAIQLTRKV   60 (391)
Q Consensus        41 HRs~~f~~i~~~~~~~l~~l   60 (391)
                      ||..-|.+++.|=..-++..
T Consensus       255 ~sv~tlL~~L~EDf~I~~~s  274 (777)
T pfam06070       255 TSVDTLLERLEEDFDIYEDS  274 (777)
T ss_pred             CHHHHHHHHHHHHHHHHHHH
T ss_conf             30999999999889999877


No 374
>TIGR02081 metW methionine biosynthesis protein MetW; InterPro: IPR010743   This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells . .
Probab=27.67  E-value=25  Score=15.17  Aligned_cols=92  Identities=12%  Similarity=-0.014  Sum_probs=38.4

Q ss_pred             HHHHHHCC-CCCCEEEEECCCCHHHHHHHHHHCC---C-CCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
Q ss_conf             99999688-9985799974873489998753205---7-89707997073688888765323876306740577765786
Q gi|254780153|r   56 LTRKVLEV-PENYRIAIVPASDTGAVEMALWSLL---G-YRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDF  130 (391)
Q Consensus        56 ~l~~l~~~-p~~y~v~~l~GsgT~~~ea~~~nl~---~-~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~  130 (391)
                      .++.+++. |...+|+=+ |.|-|..=+++.+=-   + |...+-+-.=+-.++-..+|.++| .+|+....+.|    +
T Consensus         3 Dl~~I~~~Ip~GSRVLDL-GCGdG~LL~~L~d~k~v~GPPttehRL~G~Eid~~~v~Ac~~RG-v~VIq~Dld~G----L   76 (205)
T TIGR02081         3 DLELILDLIPPGSRVLDL-GCGDGELLALLRDEKQVRGPPTTEHRLYGIEIDQDGVLACVARG-VSVIQGDLDEG----L   76 (205)
T ss_pred             HHHHHHHHCCCCCEEEEE-CCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHCC-CCEECCCCCCC----C
T ss_conf             578898616888736410-16887899999974378988871200010234544599998625-20130060034----0


Q ss_pred             HHCCCCCCEEEEEEECCCCEEEC
Q ss_conf             76785565799742024202203
Q gi|254780153|r  131 SKVDFDRDVVFVWNGTTSGVCVP  153 (391)
Q Consensus       131 ~~~~~~~~v~~~h~ETstGv~~~  153 (391)
                      +..+...-=.++-+=|-..|.||
T Consensus        77 ~~F~D~~FD~ViLsQTLQa~~Np   99 (205)
T TIGR02081        77 EAFPDKSFDYVILSQTLQATRNP   99 (205)
T ss_pred             CCCCCCCCCEEEECHHHHHHHCH
T ss_conf             11678876625421356642256


No 375
>PRK10294 6-phosphofructokinase 2; Provisional
Probab=27.58  E-value=41  Score=13.81  Aligned_cols=48  Identities=15%  Similarity=0.046  Sum_probs=28.1

Q ss_pred             CCCCHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             487348999875320578970799-7073688888765323876306740
Q gi|254780153|r   73 PASDTGAVEMALWSLLGYRGVDVL-AWESFGLGWMSDIRQLSLQDVREFT  121 (391)
Q Consensus        73 ~GsgT~~~ea~~~nl~~~~~~~~~-~~g~~~~r~~~~~~~~~~~~~~~~~  121 (391)
                      .-||-|.+-|++...++-....+. +.|..|....+.+++ .+.++..+.
T Consensus        36 ~pGGKG~NvA~al~~LG~~~~~ig~vGg~~G~~l~~~L~~-~gv~~~~v~   84 (309)
T PRK10294         36 EPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLAD-ENVPVATVE   84 (309)
T ss_pred             CCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH-CCCCEEEEE
T ss_conf             3886289999999986998699999148768999999998-699646999


No 376
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=27.40  E-value=41  Score=13.79  Aligned_cols=37  Identities=16%  Similarity=0.170  Sum_probs=24.6

Q ss_pred             HHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             996889985799974873489998753205789707997
Q gi|254780153|r   59 KVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        59 ~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      ++|++.+  ++++++|++.|-=.++...|.+.|-.+++.
T Consensus         9 ~~f~L~g--KvalVTGas~GIG~aiA~~la~~Ga~Vvi~   45 (258)
T PRK06935          9 DFFSLKG--KVAIVTGGNTGLGQGYAVALAKAGADIIIT   45 (258)
T ss_pred             HHCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             4319999--989994857589999999999879999997


No 377
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=26.96  E-value=42  Score=13.74  Aligned_cols=110  Identities=15%  Similarity=0.214  Sum_probs=49.2

Q ss_pred             HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC
Q ss_conf             99999688998579997487348999875320578970799707368888876532387630674057776578676785
Q gi|254780153|r   56 LTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF  135 (391)
Q Consensus        56 ~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  135 (391)
                      ..+++|+--++-+++++-.|+.+  ..++.+|.+.+-..+.+.+---.|..+.+.++++..+....  +.   ++.+.-.
T Consensus         2 la~~~~~~l~~~~vlVIGaG~~~--~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~---~l~~~l~   74 (134)
T pfam01488         2 LAKKIFGDLKGKKVLLIGAGEMA--RLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALP--LD---ELEELLA   74 (134)
T ss_pred             HHHHHHCCCCCCEEEEECCCHHH--HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEE--CH---HHHHHHH
T ss_conf             27776388148989999960999--99999999759988999547578999999984997258985--13---5441363


Q ss_pred             CCCEEEEEEECCCCEEECCE--EEECCCCCCEEEEEECCHHHHCCCCC
Q ss_conf             56579974202420220320--35025686148864011011025455
Q gi|254780153|r  136 DRDVVFVWNGTTSGVCVPDV--GFIPESREGLVICDATSAVFARHIDF  181 (391)
Q Consensus       136 ~~~v~~~h~ETstGv~~~~~--~~~~~~~~~llivD~vSs~g~~p~d~  181 (391)
                      ..++.++  .|+.+  .+..  +.+......++++|.     +.|=|.
T Consensus        75 ~~DivI~--aT~s~--~~ii~~~~~~~~~~~~~iiDL-----avPrnv  113 (134)
T pfam01488        75 EADIVIS--ATSAP--TPIITKEMVEEALKGLLFVDI-----AVPRDI  113 (134)
T ss_pred             HCCEEEE--ECCCC--CCEECHHHHHHCCCCEEEEEE-----CCCCCC
T ss_conf             1999999--25999--736489999744398599983-----478886


No 378
>TIGR00438 rrmJ ribosomal RNA large subunit methyltransferase J; InterPro: IPR004512 The ribosomal RNA large subunit methyltransferase J 2.1.1 from EC methylates the 23S rRNA. It specifically methylates the uridine in position 2552 of 23s rRNA in the 50S particle using S-adenosyl-L-methionine as a substrate. It was previously known as cell division protein ftsJ.; GO: 0016436 rRNA (uridine) methyltransferase activity, 0006364 rRNA processing.
Probab=26.52  E-value=42  Score=13.69  Aligned_cols=94  Identities=15%  Similarity=0.131  Sum_probs=51.7

Q ss_pred             HHCCCCCCEEE---EEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC--CCCCEEEEEEE-CCCCEEECCEEEE
Q ss_conf             32057897079---970736888887653238763067405777657867678--55657997420-2420220320350
Q gi|254780153|r   85 WSLLGYRGVDV---LAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD--FDRDVVFVWNG-TTSGVCVPDVGFI  158 (391)
Q Consensus        85 ~nl~~~~~~~~---~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~v~~~h~E-TstGv~~~~~~~~  158 (391)
                      .+|+++|+.++   ..=|+|+|-....+..-|..  .        +.|+..++  ....|.+...+ |-.-+++-+.+.+
T Consensus        27 ~kLik~G~~VlDLGAAPGGWsQva~~~~G~kG~V--i--------A~Dl~~~k~FP~~nv~fi~GDftdee~l~ki~~~~   96 (192)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRV--I--------AVDLQPMKGFPIENVDFIRGDFTDEEVLNKILERV   96 (192)
T ss_pred             CCCEECCCEEEECCCCCCCHHHHHHHHHCCCCEE--E--------EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHC
T ss_conf             5611078867865789873877887760685338--9--------98545578856466147544767878999999857


Q ss_pred             CCC--CCCEEEEEECCHHHHCC-CCCCC-CEEEE
Q ss_conf             256--86148864011011025-45568-57999
Q gi|254780153|r  159 PES--REGLVICDATSAVFARH-IDFNK-LDVVT  188 (391)
Q Consensus       159 ~~~--~~~llivD~vSs~g~~p-~d~~~-iDv~~  188 (391)
                      +.+  +--.+|-||+=++-+.+ +|.-. +|.+-
T Consensus        97 g~dekk~DVV~SDaaP~~SG~~~iDh~Rs~dLv~  130 (192)
T TIGR00438        97 GDDEKKVDVVMSDAAPNISGIWDIDHLRSIDLVE  130 (192)
T ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf             8987437789852688878987543443799999


No 379
>cd03062 TRX_Fd_Sucrase TRX-like [2Fe-2S] Ferredoxin (Fd) family, Sucrase subfamily; composed of proteins with similarity to a novel plant enzyme, isolated from potato, which contains a Fd-like domain and exhibits sucrolytic activity. The putative active site of the Fd-like domain of the enzyme contains two cysteines and two histidines for possible binding to iron-sulfur clusters, compared to four cysteines present in the active site of Fd.
Probab=25.40  E-value=44  Score=13.56  Aligned_cols=33  Identities=18%  Similarity=-0.022  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCEEEE----E-CCCCCCHHHHHHHHHHHH
Q ss_conf             26655676750568----6-158889999999999999
Q gi|254780153|r  344 DIGSYRDAPLGLRV----W-VGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       344 ~~~~~r~~~~~~RI----g-~~g~i~~~dv~~L~~aLe  376 (391)
                      -+||||-+++.+=-    | .||.++++|+..+++...
T Consensus        46 H~GGHrfA~n~i~~p~~~g~~yGrv~p~~~~~iv~~~~   83 (97)
T cd03062          46 HVGGHKFAGNVIIYPKGDGIWYGRVTPEHVPPIVDRLI   83 (97)
T ss_pred             CCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHH
T ss_conf             04676547537996178861788338899999999998


No 380
>pfam04127 DFP DNA / pantothenate metabolism flavoprotein. The DNA/pantothenate metabolism flavoprotein (EC:4.1.1.36) affects synthesis of DNA, and pantothenate metabolism.
Probab=24.44  E-value=46  Score=13.45  Aligned_cols=76  Identities=11%  Similarity=0.113  Sum_probs=45.8

Q ss_pred             EECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEECCHHHH
Q ss_conf             70736888887653238763067405777657867678556579974202420220320350256861488640110110
Q gi|254780153|r   97 AWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFA  176 (391)
Q Consensus        97 ~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~vSs~g~  176 (391)
                      .+|.-|...++.+.++| .+|+.+..+....+     +....+-.++.+|+.-+..-....+....+.++.+-|+|++--
T Consensus        26 SSGkmG~alA~~~~~~G-a~V~li~g~~~~~~-----~~~~~~~~i~v~t~~em~~~~~~~~~~~~D~~I~aAAVsDf~p   99 (197)
T pfam04127        26 SSGKMGAAIAEEFLKRG-ADVTLIAGKGSLKP-----EPSGNLLIIPVETAEEMLNALKEIAPDLHDVFILAAAVSDFRP   99 (197)
T ss_pred             CCHHHHHHHHHHHHHCC-CCEEEEECCCCCCC-----CCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
T ss_conf             95599999999999789-93899723565566-----8988818999689999999999747565779999100044554


Q ss_pred             CC
Q ss_conf             25
Q gi|254780153|r  177 RH  178 (391)
Q Consensus       177 ~p  178 (391)
                      .+
T Consensus       100 ~~  101 (197)
T pfam04127       100 KE  101 (197)
T ss_pred             CC
T ss_conf             00


No 381
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=24.24  E-value=47  Score=13.42  Aligned_cols=40  Identities=15%  Similarity=0.086  Sum_probs=29.7

Q ss_pred             HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             999996889985799974873489998753205789707997
Q gi|254780153|r   56 LTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        56 ~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      .+.++|++.+  ++++++|++.|-=.++..-|.+.|-.+++.
T Consensus         3 ~i~~lf~L~g--KvalVTG~s~GIG~aia~~la~~Ga~V~i~   42 (259)
T PRK08213          3 TVLELFDLTG--KTALVTGGSRGLGLQIAEALGEAGARVVLS   42 (259)
T ss_pred             CHHHHHCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             7678739999--989994877689999999999869999999


No 382
>cd00411 Asparaginase Asparaginase (amidohydrolase): Asparaginases are tetrameric enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases, one  highly specific for asparagine and localised to the periplasm, and a second (asparaginase- glutaminase) present in the cytosol that hydrolyzises both asparagine and glutamine with similar specificities.
Probab=24.19  E-value=47  Score=13.42  Aligned_cols=55  Identities=16%  Similarity=-0.057  Sum_probs=39.0

Q ss_pred             CCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             3289-889999999999999996889985799974873489998753205789707997073
Q gi|254780153|r   40 SHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES  100 (391)
Q Consensus        40 sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~  100 (391)
                      |+-+ .+..+|.+.+.+.+..    -+  -+++++|.-|.+..|..++|+=++++=++.+|.
T Consensus        58 s~m~p~~w~~ia~~i~~~~~~----~d--G~VVtHGTDTle~TA~~Ls~~l~~~kPVVlTGs  113 (323)
T cd00411          58 SDMTDEDWLKIAKDINELYDS----YD--GFVITHGTDTMEETAYFLSLTLENDKPVVLTGS  113 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHC----CC--EEEEECCCCHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             438999999999999998732----68--599955852499999999998247997899678


No 383
>pfam06745 KaiC KaiC. This family represents a conserved region within bacterial and archaeal proteins, most of which are hypothetical. More than one copy is sometimes found in each protein. This family includes KaiC, which is one of the Kai proteins among which direct protein-protein association may be a critical process in the generation of circadian rhythms in cyanobacteria.
Probab=24.00  E-value=47  Score=13.40  Aligned_cols=58  Identities=16%  Similarity=0.178  Sum_probs=29.2

Q ss_pred             HHHHHH--CCCCCCEEEEECCCCHH----HHHHHHHHCCCCCC-EEEEEECCHHHHHHHHHHHCC
Q ss_conf             999996--88998579997487348----99987532057897-079970736888887653238
Q gi|254780153|r   56 LTRKVL--EVPENYRIAIVPASDTG----AVEMALWSLLGYRG-VDVLAWESFGLGWMSDIRQLS  113 (391)
Q Consensus        56 ~l~~l~--~~p~~y~v~~l~GsgT~----~~ea~~~nl~~~~~-~~~~~~g~~~~r~~~~~~~~~  113 (391)
                      .|=+++  ++|.+..+++.-.+|+|    ++..+..++.+.|+ .+++....--+.....+...+
T Consensus         7 ~LD~~l~GGi~~gs~~LI~G~pGsGKT~la~qfl~~ga~~~ge~~lYis~ee~~~~l~~~~~~~g   71 (231)
T pfam06745         7 GLDEILKGGIPEGRVVLITGGPGTGKTIFGLQFLYNGALEYGEPGVYVTLEEPPEDLRENAKSFG   71 (231)
T ss_pred             HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCC
T ss_conf             68863169982996999985897259999999999999865896899981379999999999829


No 384
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=23.85  E-value=47  Score=13.38  Aligned_cols=39  Identities=10%  Similarity=0.089  Sum_probs=27.6

Q ss_pred             HHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             99996889985799974873489998753205789707997
Q gi|254780153|r   57 TRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        57 l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      ++++|++.+  ++++++|++.|-=-++...|.+.|-.+++.
T Consensus         2 m~~~f~l~g--K~alVTG~s~GIG~aiA~~la~~Ga~Vii~   40 (265)
T PRK07097          2 MENMFSLKG--KIALITGASYGIGFAIAKAYAEAGATIVFN   40 (265)
T ss_pred             CCCCCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             640419899--989995857689999999999869999999


No 385
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=23.66  E-value=48  Score=13.35  Aligned_cols=38  Identities=18%  Similarity=0.173  Sum_probs=25.9

Q ss_pred             HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             9996889985799974873489998753205789707997
Q gi|254780153|r   58 RKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA   97 (391)
Q Consensus        58 ~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~   97 (391)
                      ..+|++.+  ++++++|++.|-=.++...|.+.|-.+++.
T Consensus         2 ~~~~~L~g--KvalVTGgs~GIG~aia~~la~~Ga~V~~~   39 (266)
T PRK06171          2 QTWLNLQG--KIIIVTGGSSGIGLAIVEELLAQGANVQMV   39 (266)
T ss_pred             CCCCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             98638999--979994778789999999999879999999


No 386
>PRK13533 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional
Probab=23.21  E-value=49  Score=13.30  Aligned_cols=66  Identities=12%  Similarity=-0.026  Sum_probs=39.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-CCCC---CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf             7655646899888688877689689999863210-3653---28988999999999999999688998579997487348
Q gi|254780153|r    3 DMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGAL-LGRS---HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG   78 (391)
Q Consensus         3 ~~~~~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~-l~~s---HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~   78 (391)
                      ..+-|..+|. .|  |---.+.|+.+ +.++.++ |..+   ++.+- .++   +..+|+++++-+.    .+|+-||+.
T Consensus        23 ~IeTP~fmPV-in--p~vk~i~p~el-~~~Ga~iIItNtY~l~~rpg-~~a---~~~GLH~fm~wdg----pImTDSGgF   90 (486)
T PRK13533         23 VVETPALFPV-IN--PHKQEIPPEEL-KEFGFEALITNSYIIYRSER-ERA---LEKGLHELLGFDG----VIMTDSGSY   90 (486)
T ss_pred             EEECCCCCCC-CC--CCCCCCCHHHH-HHHCCCEEEEECCCEECCCC-HHH---HHCCHHHHCCCCC----CEEECCCCC
T ss_conf             6607853235-27--74571189999-98179899310110002760-667---7607087609999----737668876


Q ss_pred             HH
Q ss_conf             99
Q gi|254780153|r   79 AV   80 (391)
Q Consensus        79 ~~   80 (391)
                      |.
T Consensus        91 Qv   92 (486)
T PRK13533         91 QL   92 (486)
T ss_pred             EE
T ss_conf             43


No 387
>TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component; InterPro: IPR010199   This entry describes an NADPH-dependent sulphite reductase flavoprotein subunit. Most members of the proteins of this entry are found in Cys biosynthesis gene clusters. The closest homologues are designated as subunits nitrate reductase.; GO: 0004783 sulfite reductase (NADPH) activity, 0000103 sulfate assimilation, 0019344 cysteine biosynthetic process.
Probab=22.89  E-value=35  Score=14.25  Aligned_cols=155  Identities=15%  Similarity=0.038  Sum_probs=75.6

Q ss_pred             EEECCHHHHCCCCCCCCEEEEECCHHCCCC-----------CCCCEEEEECHHHHHHHHHCCCCCCCCCHHH------CC
Q ss_conf             640110110254556857999700120017-----------6651544567788876541144577831232------00
Q gi|254780153|r  168 CDATSAVFARHIDFNKLDVVTFSAQKVLGG-----------EAGFGIIILSPASVERLEKYVPSWPLPKIFR------MV  230 (391)
Q Consensus       168 vD~vSs~g~~p~d~~~iDv~~a~sQK~l~~-----------ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~------~~  230 (391)
                      .=+.|+|++..+..++.==||--.+++|=.           =||.|+.=++-=.-+|.+.. ..+.+|-+|=      -.
T Consensus       447 ~GgaS~fLA~rl~~gd~v~vyve~N~nFRLP~d~dtPiIMIGpGTGvAPFRaF~QeR~~~~-A~GknWLFFGnpHF~~DF  525 (628)
T TIGR01931       447 LGGASGFLAERLEEGDTVKVYVERNDNFRLPEDPDTPIIMIGPGTGVAPFRAFMQERAEDG-AKGKNWLFFGNPHFTTDF  525 (628)
T ss_pred             ECCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCC-CCCCEEEEECCCCCCCCH
T ss_conf             4410577886508897677887517788888888978787368778000023578876348-998625321788713213


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             11232103347864466644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r  231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM  310 (391)
Q Consensus       231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~  310 (391)
                      .|.-.|+..-|...        +--+..|  |-..+.-=-.+..|-+++++-||.||..  |...+|.            
T Consensus       526 LYQ~EWQ~ylK~G~--------LT~~DlA--fSRDq~eKiYVQhrirE~g~ELw~Wlq~--GA~iYVC------------  581 (628)
T TIGR01931       526 LYQVEWQKYLKKGV--------LTRMDLA--FSRDQAEKIYVQHRIREQGAELWQWLQE--GAHIYVC------------  581 (628)
T ss_pred             HHHHHHHHHHHCCC--------CEEECCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHC--CCEEEEE------------
T ss_conf             57899999983565--------3100230--0326565311556778748999999858--9748982------------


Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             824731011373456788899999888628287266556767505686158889999999999999
Q gi|254780153|r  311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
                        .|          +.++.|++=+.|..  |               |...|.++.|.-++-++-|.
T Consensus       582 --GD----------A~~MAKDVh~aLL~--v---------------i~~~G~~d~E~A~eyL~~LR  618 (628)
T TIGR01931       582 --GD----------AKKMAKDVHQALLD--V---------------IAKEGGLDAEEAEEYLTDLR  618 (628)
T ss_pred             --CC----------HHHHHHHHHHHHHH--H---------------HHHCCCCCHHHHHHHHHHHH
T ss_conf             --68----------20103479999999--9---------------99618988889999999887


No 388
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; InterPro: IPR006009    The murG gene of Escherichia coli encodes the N-acetylglucosaminyltransferase, UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, responsible for the final step in the formation of the lipid-linked disaccharide-pentapeptide subunit of peptidoglycan. The enzyme is peripherally associated with the inner face of the cytoplasmic membrane. Therefore, the peptidoglycan subunit is completely assembled before it traverses the cytoplasmic membrane .; GO: 0050511 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity, 0019277 UDP-N-acetylgalactosamine biosynthetic process, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=22.43  E-value=50  Score=13.21  Aligned_cols=24  Identities=13%  Similarity=0.124  Sum_probs=11.6

Q ss_pred             EEEEECCCCHHHHH---HHHHHCCCCC
Q ss_conf             79997487348999---8753205789
Q gi|254780153|r   68 RIAIVPASDTGAVE---MALWSLLGYR   91 (391)
Q Consensus        68 ~v~~l~GsgT~~~e---a~~~nl~~~~   91 (391)
                      ..+++.|||||++=   |+.-.|.+.+
T Consensus         6 ~~~~~~gGGTGG~fPAlA~a~~l~~~~   32 (368)
T TIGR01133         6 KKVALAGGGTGGIFPALAVAEELIKRG   32 (368)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf             289997278302689999999999748


No 389
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed
Probab=22.22  E-value=51  Score=13.18  Aligned_cols=27  Identities=11%  Similarity=-0.080  Sum_probs=21.1

Q ss_pred             EEEEECCC-CCCHHHHHHHHHHHHHHHH
Q ss_conf             05686158-8899999999999999999
Q gi|254780153|r  354 GLRVWVGV-TVEKEDLLLLCDWLRWVFY  380 (391)
Q Consensus       354 ~~RIg~~g-~i~~~dv~~L~~aLe~~~~  380 (391)
                      ++|.|++| .++++|+....+-++.+.+
T Consensus       350 ~~~~Glggrd~~~~~~~~~~~~~~~~~~  377 (395)
T PRK08367        350 DFILGLGGRDVTFKQLDEALAIAQKALE  377 (395)
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             3770578876999999999999999984


No 390
>PRK09275 aspartate aminotransferase; Provisional
Probab=22.09  E-value=47  Score=13.40  Aligned_cols=317  Identities=15%  Similarity=0.158  Sum_probs=130.9

Q ss_pred             HHHHCC---CCCCEEEEECCCCHHHHHHHHHH-----CCCCCCEEEEEECCHHHHH-HHHHHHCCCCCEEEEEC-CCC--
Q ss_conf             999688---99857999748734899987532-----0578970799707368888-87653238763067405-777--
Q gi|254780153|r   58 RKVLEV---PENYRIAIVPASDTGAVEMALWS-----LLGYRGVDVLAWESFGLGW-MSDIRQLSLQDVREFTA-PYG--  125 (391)
Q Consensus        58 ~~l~~~---p~~y~v~~l~GsgT~~~ea~~~n-----l~~~~~~~~~~~g~~~~r~-~~~~~~~~~~~~~~~~~-~~g--  125 (391)
                      +++++-   +.++. +|-+-|||.||-=+.-+     |+.+||++.+..--|.=.. .-+..++.. ++..+.+ +..  
T Consensus       154 ~em~~~~~~~~~fd-lFatEGgTAAM~YiF~sL~~N~LL~~GDkIAi~~PIFTPYlEIP~L~~Y~l-~vV~i~a~~~~~W  231 (531)
T PRK09275        154 QEMCGNRPPPGEFD-LFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPDYDL-EVVHISADEKNEW  231 (531)
T ss_pred             HHHCCCCCCCCCCC-EEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC-EEEEEECCCCCCC
T ss_conf             99628999988731-674167205799999999975887889878995677776301677666786-2899855654588


Q ss_pred             CCCC--HHHC--CCCCCEEEEE--EECCCCEEECC----EEEECC-CCCCEEEEEECCHHHHCCCC--CCCC---EEEEE
Q ss_conf             6578--6767--8556579974--20242022032----035025-68614886401101102545--5685---79997
Q gi|254780153|r  126 SLPD--FSKV--DFDRDVVFVW--NGTTSGVCVPD----VGFIPE-SREGLVICDATSAVFARHID--FNKL---DVVTF  189 (391)
Q Consensus       126 ~~~~--~~~~--~~~~~v~~~h--~ETstGv~~~~----~~~~~~-~~~~llivD~vSs~g~~p~d--~~~i---Dv~~a  189 (391)
                      +.++  ++.+  +..+++++|-  |=+|-.+.-..    .+++.. ..+..+|.|-|=.-.+..+.  +..+   -+.+-
T Consensus       232 Qy~d~EleKL~DP~IKAlf~VNPsNP~S~~ls~e~l~~i~~IV~~~nPdLmIiTDDVYgTF~~~F~Sl~a~~P~NTi~VY  311 (531)
T PRK09275        232 QYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESLEKIADIVKEDRPDLMIITDDVYGTFVDDFRSLFAELPYNTLLVY  311 (531)
T ss_pred             CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEHHHHCCCCEEEEE
T ss_conf             77989998744977118999899998666569999999999997429987999546532264564636564887547888


Q ss_pred             CCHHCCCCCCC--CEEEEECHH-------------HHHHHHHCC-CCCCCCCHHHCCHHHHH-----HCCCCCCCCCCCC
Q ss_conf             00120017665--154456778-------------887654114-45778312320011232-----1033478644666
Q gi|254780153|r  190 SAQKVLGGEAG--FGIIILSPA-------------SVERLEKYV-PSWPLPKIFRMVKGGRV-----MEGLFCGETINTP  248 (391)
Q Consensus       190 ~sQK~l~~ppG--l~~v~~s~~-------------al~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~TP  248 (391)
                      |--|=+|. .|  +|++.+.++             ..++..+.- .-...|.-+++-+-.-+     ..+..-|  ..||
T Consensus       312 SfSKyFGa-TGWRLG~Ialh~~NvfD~~i~~Lp~~~k~~L~~RY~~lt~~P~~lkFIDRlVADSR~VALnHTAG--LStP  388 (531)
T PRK09275        312 SFSKYFGA-TGWRLGVIALHEDNVFDKLIAELPEEKKKELDKRYSSLTTEPEKLKFIDRLVADSRQVALNHTAG--LSTP  388 (531)
T ss_pred             EEHHCCCC-CCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CCCH
T ss_conf             63100588-44110344541033077999866887899999877554688233540677652178888766037--8809


Q ss_pred             CHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH---H
Q ss_conf             44889999999986201031--899999999779999999874797167668820036531789824731011373---4
Q gi|254780153|r  249 SLLCIEDYIDALLWLKKMGG--LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI---N  323 (391)
Q Consensus       249 ~v~~i~al~~~l~~i~~~gG--l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~---~  323 (391)
                      - ....+|=.....+ .++.  .+.+.+.++++-+.+|+.+.    +. ...++. +..==+.+.+..-.-.....   +
T Consensus       389 Q-QvqM~LFsl~~L~-d~~~~Yk~~~~~ii~~R~~~L~~~lg----~~-~~~~~~-~~~YYt~idl~~~a~~~yg~~F~~  460 (531)
T PRK09275        389 Q-QVQMALFSLFSLL-DEEDAYKKAMKDIIRRRYKALYEGLG----LP-EPEDPN-NAAYYTLIDLEEWAEKNYGKEFAE  460 (531)
T ss_pred             H-HHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHCC----CC-CCCCCC-CCCEEEEEEHHHHHHHHHCHHHHH
T ss_conf             9-9999999999862-77338999999999999999998549----99-888987-655245660999999876789999


Q ss_pred             H--HHHHHHHHHHHHHHCCEEECCCCC--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             5--678889999988862828726655--6767505686158889999999999999999999998775
Q gi|254780153|r  324 S--QKSFCKSMLSFLEKEEIAYDIGSY--RDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLR  388 (391)
Q Consensus       324 ~--~~~~~~~~~~~l~~~g~~~~~~~~--r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~  388 (391)
                      +  +....-++.-+|.++.+++-+.|.  ..-.-++|||.=| .+++|-.+.-+.|...+.+-...+.+
T Consensus       461 ~l~~~~~p~d~lfrLA~e~~vVLl~G~GF~~p~ws~RVSLAN-L~~~dY~~IG~~i~~~l~eY~~~~~~  528 (531)
T PRK09275        461 YLKKNYSPLDLLFRLAEETGIVLLPGGGFGGPEWSLRVSLAN-LNEEDYAKIGKSIRKLLDEYYEEYKK  528 (531)
T ss_pred             HHHHHCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECC-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999728888899999987378995588779998625887368-99889999999999999999999987


No 391
>KOG4044 consensus
Probab=21.87  E-value=44  Score=13.58  Aligned_cols=51  Identities=18%  Similarity=0.107  Sum_probs=32.7

Q ss_pred             HHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEECCHHHHCCCC
Q ss_conf             676785565799742024202203203502568614886401101102545
Q gi|254780153|r  130 FSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHID  180 (391)
Q Consensus       130 ~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~vSs~g~~p~d  180 (391)
                      +.++...+.|.++..||---++....+.+...-+.-+|+||+||=...+-|
T Consensus        97 ~~~i~~~k~VvL~GiEthvCv~qTa~dLl~rgl~VhvVaDacSSRs~~DR~  147 (201)
T KOG4044          97 LKDIFGGKTVVLFGIETHVCVLQTALDLLERGLNVHVVADACSSRSNQDRD  147 (201)
T ss_pred             HHHCCCCCEEEEEECCHHEEHHHHHHHHHHCCCEEEEEEEHHCCCCCHHHH
T ss_conf             875359974999831000004887999986796499985400242000078


No 392
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit; InterPro: IPR012722    Members of this eukaryotic family are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding.
Probab=21.60  E-value=53  Score=13.10  Aligned_cols=63  Identities=8%  Similarity=0.106  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHH--HHHHHHHHHHCCEEECC
Q ss_conf             9999999874797167668820036531789824731011373456788--89999988862828726
Q gi|254780153|r  280 AAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSF--CKSMLSFLEKEEIAYDI  345 (391)
Q Consensus       280 a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~--~~~~~~~l~~~g~~~~~  345 (391)
                      |-++|+..-...-|++.   ++.+.|=++|+-+..|...++.+-.++.-  .+.+.......+++-|.
T Consensus       357 AGlVYE~~~GEEKyTFi---Ee~~~PkScTiLIkGpn~~ti~QiKDAvRDGLRAv~N~i~D~cv~~GA  421 (548)
T TIGR02347       357 AGLVYETVIGEEKYTFI---EEVKNPKSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGA  421 (548)
T ss_pred             CCEEEEEEECCCCCEEE---EECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf             52134135568500022---103878616887328864467764676652257645454135513561


No 393
>TIGR00611 recf DNA replication and repair protein RecF; InterPro: IPR001238   All proteins in this family, including recF, for which functions are known are DNA binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair. RecF is involved in DNA metabolism and is required for recombinational DNA repair and for induction of the SOS response , . ; GO: 0003697 single-stranded DNA binding, 0005524 ATP binding, 0006281 DNA repair.
Probab=21.55  E-value=32  Score=14.43  Aligned_cols=74  Identities=15%  Similarity=0.162  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC--CEEECCCCCCCCCCEEE
Q ss_conf             7999999987479716766882003653178982473101137345678889999988862--82872665567675056
Q gi|254780153|r  279 NAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE--EIAYDIGSYRDAPLGLR  356 (391)
Q Consensus       279 ~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~~~~~r~~~~~~R  356 (391)
                      -++.+|+.+.  ++.+..  .-.|++.+-++ .++++...   .+....+.+.+.....++  -++--.|+||.= --||
T Consensus       230 ~~~~~~~~~l--~~~~~~--~~~y~~s~e~~-~~~~~~~~---~~~~~~~~~~L~~~~~~d~~rg~T~~GPHRdD-l~~~  300 (399)
T TIGR00611       230 EAQKAHQLLL--PELESL--SLFYRGSLEVI-DADEAETL---WDIETDYAEALARNFERDLERGYTLVGPHRDD-LRFR  300 (399)
T ss_pred             HHHHHHHHHC--CCCHHH--HHHHCCCEEEE-ECCCCCCH---HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHH
T ss_conf             9999999742--520234--55430120133-27871256---88999999999987466886689964873477-7754


Q ss_pred             EECCC
Q ss_conf             86158
Q gi|254780153|r  357 VWVGV  361 (391)
Q Consensus       357 Ig~~g  361 (391)
                      |+=++
T Consensus       301 ~n~~p  305 (399)
T TIGR00611       301 LNGLP  305 (399)
T ss_pred             HCCCC
T ss_conf             15858


No 394
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=21.48  E-value=53  Score=13.08  Aligned_cols=164  Identities=15%  Similarity=0.153  Sum_probs=79.7

Q ss_pred             CCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHC--CC---------------CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             987655646--899888688877689689999863210--36---------------53289889999999999999996
Q gi|254780153|r    1 MLDMRKPTR--KPKRPFFSSGPCAKRPGWSLGILEGAL--LG---------------RSHRCVLGKERINKAIQLTRKVL   61 (391)
Q Consensus         1 ~~~~~~~~~--~p~~~~F~pGP~~~~p~~v~~~~~~~~--l~---------------~sHRs~~f~~i~~~~~~~l~~l~   61 (391)
                      |+++=+++-  --+.++|-+|||.+--+.-...++..+  ++               .|-|++-. + ==+....+++-+
T Consensus         1 ~~~~~~~f~~~~~~k~~lIAGPC~iES~e~~~~~A~~lk~~g~~~~r~~~~K~RTs~~sfrG~G~-e-gL~~L~~vk~~~   78 (250)
T PRK13397          1 MIDIMSDFQNKTCSKNNFIVGPCSIESYDHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGL-Q-GIRYLHEVCQEF   78 (250)
T ss_pred             CCHHHHHHCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCH-H-HHHHHHHHHHHC
T ss_conf             90267654046888887885587330999999999999984988575362688899977678888-8-999999999983


Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-------
Q ss_conf             8899857999748734899987532057897079970736888887653238763067405777657867678-------
Q gi|254780153|r   62 EVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-------  134 (391)
Q Consensus        62 ~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------  134 (391)
                      ++|---+|     --..+.|.+. ..     +.++-.|.|--|-...+...+..+..+ ...-|+..++++|.       
T Consensus        79 glpi~TdV-----h~~~q~e~v~-~~-----vDilQIpAfl~rqtdLl~a~a~t~kpV-~iKkgq~~s~~~~~~a~eki~  146 (250)
T PRK13397         79 GLLSVSEI-----MSERQLEEAY-DY-----LDVIQVGARNMQNFEFLKTLSHIDKPI-LFKRGLMATIEEYLGALSYLQ  146 (250)
T ss_pred             CCCEEEEC-----CCHHHHHHHH-HH-----CCEEEECHHHHCCHHHHHHHHHHCCEE-EECCCCCCCHHHHHHHHHHHH
T ss_conf             99748847-----9999999998-44-----748987726404989999987309808-978877799999999999999


Q ss_pred             --CCCCEEEEEEECCCCEEEC---CEE-----EECCCCCCEEEEEECCHHHHCCC
Q ss_conf             --5565799742024202203---203-----50256861488640110110254
Q gi|254780153|r  135 --FDRDVVFVWNGTTSGVCVP---DVG-----FIPESREGLVICDATSAVFARHI  179 (391)
Q Consensus       135 --~~~~v~~~h~ETstGv~~~---~~~-----~~~~~~~~llivD~vSs~g~~p~  179 (391)
                        -...+.+|+=.|+ |....   ...     .+.+..+.++|+|++-|.|.+++
T Consensus       147 ~~Gn~~i~l~ERG~~-gy~~~~rn~~d~~~ip~~~~~~~~PVi~D~SHs~G~r~~  200 (250)
T PRK13397        147 DTGKSNIILCERGVR-GYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGRRDL  200 (250)
T ss_pred             HCCCCCEEEEECCCC-CCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCH
T ss_conf             659982899828987-555631257007777999961599989928754788252


No 395
>KOG4181 consensus
Probab=21.35  E-value=33  Score=14.40  Aligned_cols=30  Identities=10%  Similarity=-0.034  Sum_probs=16.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             158889999999999999999999998775
Q gi|254780153|r  359 VGVTVEKEDLLLLCDWLRWVFYFQKISFLR  388 (391)
Q Consensus       359 ~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~  388 (391)
                      ........++.+.+.+++++..+.....++
T Consensus       395 L~pe~~~~~~~afl~~~~E~v~e~rer~~k  424 (491)
T KOG4181         395 LLPEVSSNKATAFLSCLGELVREFRERILK  424 (491)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             385546535667877538898864486627


No 396
>KOG1405 consensus
Probab=20.73  E-value=55  Score=12.98  Aligned_cols=202  Identities=11%  Similarity=0.011  Sum_probs=94.1

Q ss_pred             CEEEEEEE--CCCCEEECC-------EEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECH
Q ss_conf             57997420--242022032-------035025686148864011011025455685799970012001766515445677
Q gi|254780153|r  138 DVVFVWNG--TTSGVCVPD-------VGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSP  208 (391)
Q Consensus       138 ~v~~~h~E--TstGv~~~~-------~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~  208 (391)
                      .|+-+-.|  -|.|-.+..       .+.++.++++.+|||-|++=|+-.=++|..+      |=+|..||  -+|.+|+
T Consensus       271 pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHe------hw~l~~Pp--D~vTFSK  342 (484)
T KOG1405         271 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHE------HWNLDSPP--DVVTFSK  342 (484)
T ss_pred             CEEEEEEECHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEH------HCCCCCCC--CCEEHHH
T ss_conf             757998651102578866898999999999986495899640000788667543202------03899995--1011025


Q ss_pred             HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r  209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ  288 (391)
Q Consensus       209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~  288 (391)
                      +...       .+++ .-..+....-|   +-.+.|..-|.-  ...+.+++..|.+++=+    +......+.++.++.
T Consensus       343 K~q~-------gGff-h~~~frpn~pY---rifNTWmGdP~k--~lll~~vv~~I~~~~Ll----~n~~~vG~~l~~gL~  405 (484)
T KOG1405         343 KFQT-------GGFF-HDEEFRPNEPY---RIFNTWMGDPSK--NLLLEEVVQEIKREDLL----NNVAHVGKALLKGLL  405 (484)
T ss_pred             HHHC-------CCCC-CCCCCCCCCHH---HHHHHHCCCHHH--HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_conf             5522-------7642-47334878447---876543078588--89999999998588899----889999999998899


Q ss_pred             HCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf             4797167668820036531-789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r  289 ENDWIENLAVDETTRSNTS-ICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED  367 (391)
Q Consensus       289 ~~~~~~~~~~~~~~rS~~~-v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d  367 (391)
                      .+.--++-- -...|++.. +.+..+++...           -.+...+.-+|+.+  ||-..  +++|.--.=.-+...
T Consensus       406 ~Lq~~~p~~-~~~~RGrGTF~a~d~ps~~~R-----------dk~i~~~~~nGv~~--GGCg~--~siRfRPsLvf~~~H  469 (484)
T KOG1405         406 ELQAKYPGK-INNLRGRGTFIAWDCPSGSIR-----------DKLILIARLNGVNL--GGCGD--KSIRFRPSLVFRKHH  469 (484)
T ss_pred             HHHHHCCHH-HHCCCCCCEEEEEECCCHHHH-----------HHHHHHHHHCCCEE--CCCCC--CEEEECCCEEEHHHH
T ss_conf             998868425-542456632799738981788-----------99999998769421--46542--025403320114666


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999999999
Q gi|254780153|r  368 LLLLCDWLRWVFY  380 (391)
Q Consensus       368 v~~L~~aLe~~~~  380 (391)
                      .+-+++.++..++
T Consensus       470 a~i~l~~~~k~l~  482 (484)
T KOG1405         470 ADIFLDIFDKILA  482 (484)
T ss_pred             HHHHHHHHHHHHC
T ss_conf             8899999999860


No 397
>cd01015 CSHase N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin  N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.
Probab=20.66  E-value=27  Score=14.90  Aligned_cols=78  Identities=5%  Similarity=-0.099  Sum_probs=40.4

Q ss_pred             EECCHHHHHHHHHHHCCCCCEEEEECCCC--CCCCHHHC---CCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEEC
Q ss_conf             70736888887653238763067405777--65786767---85565799742024202203203502568614886401
Q gi|254780153|r   97 AWESFGLGWMSDIRQLSLQDVREFTAPYG--SLPDFSKV---DFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDAT  171 (391)
Q Consensus        97 ~~g~~~~r~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~---~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~v  171 (391)
                      ..|.++..+..++..... +..+.+..+.  ...+++.+   ...+.+.++-..|...|...........+...++-||+
T Consensus        71 ~~g~~~~~~~~~l~p~~~-d~vi~K~~~saF~~T~L~~~Lr~~gI~~lvi~G~~T~~CV~~Ta~dA~~~gy~v~vv~Da~  149 (179)
T cd01015          71 VEGSPLAAICDELAPQED-EMVLVKKYASAFFGTSLAATLTARGVDTLIVAGCSTSGCIRATAVDAMQHGFRPIVVRECV  149 (179)
T ss_pred             CCCCCCCCCCCCCCCCCC-CEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf             799972340645478999-8899738778676876899998679977999840013789999999998899799945055


Q ss_pred             CHHH
Q ss_conf             1011
Q gi|254780153|r  172 SAVF  175 (391)
Q Consensus       172 Ss~g  175 (391)
                      ++..
T Consensus       150 a~~~  153 (179)
T cd01015         150 GDRA  153 (179)
T ss_pred             CCCC
T ss_conf             8999


No 398
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=20.58  E-value=55  Score=12.96  Aligned_cols=70  Identities=13%  Similarity=0.108  Sum_probs=44.7

Q ss_pred             HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE--EECCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             99999999688998579997487348999875320578970799--707368888876532387630674057
Q gi|254780153|r   53 AIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL--AWESFGLGWMSDIRQLSLQDVREFTAP  123 (391)
Q Consensus        53 ~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~--~~g~~~~r~~~~~~~~~~~~~~~~~~~  123 (391)
                      +...+-++++...+.+|+= -|+|||=-.|++..+++++..++.  ..-....+..+...+.+..++.+...+
T Consensus        63 iVA~MlElL~l~pg~rVLE-IGTGSGYqAAlLA~Lvg~~G~V~TIE~~~~L~~~Ar~~L~~lG~~NV~vv~GD  134 (317)
T PRK13943         63 LMALFMEWVGLDKGMRVLE-IGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD  134 (317)
T ss_pred             HHHHHHHHHCCCCCCEEEE-ECCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             9999999717899986899-65774389999999848787599998679999999999997799864999799


No 399
>TIGR02153 gatD_arch glutamyl-tRNA(Gln) amidotransferase, subunit D; InterPro: IPR011878    This peptide is found only in the Archaea. It is part of a heterodimer, with GatD (IPR004414 from INTERPRO), that acts as an amidotransferase on misacylated Glu-tRNA(Gln) to produce Gln-tRNA(Gln). The analogous amidotransferase found in bacteria is the GatABC system, although GatABC homologs in the Archaea appear to act instead on Asp-tRNA(Asn) .; GO: 0006450 regulation of translational fidelity.
Probab=20.45  E-value=55  Score=12.95  Aligned_cols=115  Identities=18%  Similarity=0.098  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CC--CCEEEEEECCHHHHH-HHHHHHCCCCCEEEE
Q ss_conf             89999999999999996889985799974873489998753205-78--970799707368888-876532387630674
Q gi|254780153|r   45 LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GY--RGVDVLAWESFGLGW-MSDIRQLSLQDVREF  120 (391)
Q Consensus        45 ~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~--~~~~~~~~g~~~~r~-~~~~~~~~~~~~~~~  120 (391)
                      ...+|-+++    .+-++-+++ -|++.+|.=|.++.|++++|+ +.  ..-+++|..-.|..| ..|++- +..     
T Consensus       127 ~W~~IA~~V----~~al~~G~~-GVVvaHGTDTM~YTAaALSFm~~~Gl~~PvVlVGAQRSSDRPSSDAa~-NL~-----  195 (413)
T TIGR02153       127 YWIKIAEAV----AKALEEGAD-GVVVAHGTDTMAYTAAALSFMFKTGLPVPVVLVGAQRSSDRPSSDAAL-NLI-----  195 (413)
T ss_pred             HHHHHHHHH----HHHHCCCCC-EEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHH-HHH-----
T ss_conf             999999999----998408995-389941587468999999999971699988998574358887313799-999-----


Q ss_pred             ECCCCCCCCHHHC-CCCCCEEEEEEECCCCEEECCEE--E-ECCCCCCEEEEEECCHHHHCCC
Q ss_conf             0577765786767-85565799742024202203203--5-0256861488640110110254
Q gi|254780153|r  121 TAPYGSLPDFSKV-DFDRDVVFVWNGTTSGVCVPDVG--F-IPESREGLVICDATSAVFARHI  179 (391)
Q Consensus       121 ~~~~g~~~~~~~~-~~~~~v~~~h~ETstGv~~~~~~--~-~~~~~~~llivD~vSs~g~~p~  179 (391)
                           -......- |.+..+..=|-|||-+.+.=.-.  . -.|..-    =||=.|+...|+
T Consensus       196 -----~A~~~A~~a~~aEV~VvMHG~tsD~yc~~HRGVkVRKMHTSR----RDAF~SiN~~Pi  249 (413)
T TIGR02153       196 -----AAVRAATSAPIAEVVVVMHGETSDTYCLVHRGVKVRKMHTSR----RDAFQSINSIPI  249 (413)
T ss_pred             -----HHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCEEECCCCCC----HHHHHCCCCCCC
T ss_conf             -----999983369710038884012488679996582350365881----025531588653


No 400
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=20.30  E-value=56  Score=12.93  Aligned_cols=32  Identities=19%  Similarity=0.175  Sum_probs=18.5

Q ss_pred             CEEEEEECCH-HHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             7079970736-88888765323876306740577
Q gi|254780153|r   92 GVDVLAWESF-GLGWMSDIRQLSLQDVREFTAPY  124 (391)
Q Consensus        92 ~~~~~~~g~~-~~r~~~~~~~~~~~~~~~~~~~~  124 (391)
                      +.++++.|++ +-.++..+.+.+ .+|++++...
T Consensus       173 k~v~IiGgG~ig~E~A~~~~~lG-~~Vtli~~~~  205 (462)
T PRK06416        173 KSLVVIGGGYIGIEFASAYASLG-AEVTIIEALP  205 (462)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHC-CEEEEEECCC
T ss_conf             76999889787889999999739-7689974054


No 401
>TIGR02774 rexB_recomb ATP-dependent nuclease subunit B; InterPro: IPR014141   DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA is conserved between the firmicutes and the alphaproteobacteria, while its partner protein (RexB) is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important. This entry represents RexB proteins as found in Streptococcus and Lactococcus..
Probab=20.12  E-value=56  Score=12.90  Aligned_cols=37  Identities=11%  Similarity=0.229  Sum_probs=29.6

Q ss_pred             CCCEEEEEECCHHHHCC------CCCCCCEEEEE--CCHHCCCCC
Q ss_conf             86148864011011025------45568579997--001200176
Q gi|254780153|r  162 REGLVICDATSAVFARH------IDFNKLDVVTF--SAQKVLGGE  198 (391)
Q Consensus       162 ~~~llivD~vSs~g~~p------~d~~~iDv~~a--~sQK~l~~p  198 (391)
                      ....+|||+=|=|-+++      +.-.+.+|++.  .|||+--.|
T Consensus       185 ~~~vlvvDGFtRFSAEEe~lv~~L~~~g~eiiIGaYaSqKAY~~~  229 (1116)
T TIGR02774       185 KNTVLVVDGFTRFSAEEEALVSLLHEKGVEIIIGAYASQKAYKSS  229 (1116)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCC
T ss_conf             847889717877408899999997349707997462222533157


Done!