Query gi|254780153|ref|YP_003064566.1| phosphoserine aminotransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 391
No_of_seqs 151 out of 2406
Neff 8.0
Searched_HMMs 39220
Date Sun May 22 20:24:06 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780153.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK03080 phosphoserine aminotr 100.0 0 0 659.3 36.4 379 1-385 1-380 (381)
2 TIGR01364 serC_1 phosphoserine 100.0 0 0 581.0 28.2 347 14-377 2-386 (391)
3 cd00611 PSAT_like Phosphoserin 100.0 0 0 548.1 31.3 334 14-376 1-351 (355)
4 PRK05355 phosphoserine aminotr 100.0 0 0 535.6 32.0 340 11-381 2-357 (360)
5 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 0 0 533.6 33.3 343 14-379 1-355 (355)
6 PRK12462 phosphoserine aminotr 100.0 0 0 534.1 31.7 343 9-381 1-361 (364)
7 COG1932 SerC Phosphoserine ami 100.0 0 0 533.4 31.9 347 9-383 2-365 (365)
8 COG0075 Serine-pyruvate aminot 100.0 0 0 522.4 31.6 353 13-388 6-370 (383)
9 PRK13479 2-aminoethylphosphona 100.0 0 0 518.8 31.3 352 10-384 3-366 (368)
10 cd06451 AGAT_like Alanine-glyo 100.0 0 0 496.8 31.8 344 14-380 1-356 (356)
11 KOG2862 consensus 100.0 0 0 447.5 28.6 358 7-383 12-384 (385)
12 KOG2790 consensus 100.0 0 0 447.7 23.6 342 12-381 7-367 (370)
13 TIGR01365 serC_2 phosphoserine 100.0 0 0 408.7 25.3 372 10-381 1-378 (379)
14 TIGR02326 transamin_PhnW 2-ami 100.0 0 0 398.6 25.2 344 14-380 5-364 (366)
15 TIGR01366 serC_3 phosphoserine 100.0 0 0 367.2 25.6 355 10-381 1-361 (362)
16 TIGR01979 sufS cysteine desulf 100.0 5.6E-37 1.4E-41 254.4 23.3 349 15-380 22-406 (409)
17 pfam00266 Aminotran_5 Aminotra 100.0 1E-35 2.6E-40 246.4 27.3 337 17-371 5-371 (371)
18 PRK09295 selenocysteine lyase; 100.0 4.9E-31 1.2E-35 216.6 30.3 346 15-381 26-404 (406)
19 PRK10874 cysteine sulfinate de 100.0 8.9E-31 2.3E-35 215.0 29.3 355 7-383 14-400 (401)
20 TIGR03392 FeS_syn_CsdA cystein 100.0 1.8E-30 4.7E-35 213.0 30.7 355 7-383 11-397 (398)
21 COG0520 csdA Selenocysteine ly 100.0 8.1E-31 2.1E-35 215.2 28.3 348 14-378 24-402 (405)
22 cd06453 SufS_like Cysteine des 100.0 6.4E-30 1.6E-34 209.5 27.7 338 18-375 6-373 (373)
23 TIGR01977 am_tr_V_EF2568 cyste 100.0 5.7E-29 1.5E-33 203.5 23.3 335 25-377 13-383 (384)
24 PRK02948 cysteine desulfurase; 100.0 4.9E-28 1.2E-32 197.5 27.3 330 21-391 10-380 (381)
25 TIGR03402 FeS_nifS cysteine de 100.0 1.2E-27 3E-32 195.2 26.2 328 18-384 6-375 (379)
26 TIGR03403 nifS_epsilon cystein 100.0 1.2E-26 2.9E-31 188.8 27.3 330 18-384 6-378 (382)
27 COG1104 NifS Cysteine sulfinat 99.9 7.2E-22 1.8E-26 158.4 27.2 327 21-385 11-381 (386)
28 TIGR03235 DNA_S_dndA cysteine 99.9 1.2E-22 3.1E-27 163.3 22.1 297 21-352 8-328 (354)
29 KOG1549 consensus 99.8 1.1E-16 2.9E-21 125.4 22.6 339 12-381 45-418 (428)
30 TIGR01976 am_tr_V_VC1184 cyste 99.8 7.2E-16 1.8E-20 120.3 23.3 332 14-375 23-410 (410)
31 cd01494 AAT_I Aspartate aminot 99.7 4.7E-17 1.2E-21 127.8 12.8 154 50-207 2-170 (170)
32 cd06454 KBL_like KBL_like; thi 99.6 8.5E-13 2.2E-17 100.7 23.6 303 24-378 17-348 (349)
33 PRK05958 8-amino-7-oxononanoat 99.6 1.4E-11 3.5E-16 93.0 26.7 306 23-381 54-386 (387)
34 PRK10534 L-threonine aldolase; 99.5 2E-11 5.1E-16 92.0 22.6 299 18-380 10-332 (333)
35 cd06502 TA_like Low-specificit 99.5 2.6E-11 6.6E-16 91.3 22.7 306 18-377 8-337 (338)
36 PRK13520 L-tyrosine decarboxyl 99.5 5.5E-11 1.4E-15 89.2 23.8 326 14-381 27-375 (375)
37 PRK06225 aspartate aminotransf 99.5 1.2E-10 3.1E-15 87.1 25.0 328 10-384 21-374 (375)
38 pfam00155 Aminotran_1_2 Aminot 99.5 3.4E-10 8.7E-15 84.2 26.8 304 24-375 16-351 (351)
39 PRK06939 2-amino-3-ketobutyrat 99.5 2.5E-10 6.4E-15 85.0 25.3 316 14-382 45-394 (395)
40 PRK07179 hypothetical protein; 99.5 1.5E-10 3.8E-15 86.4 24.0 309 24-386 70-404 (408)
41 PRK04870 histidinol-phosphate 99.5 4.8E-10 1.2E-14 83.3 26.2 296 24-378 41-355 (356)
42 cd06450 DOPA_deC_like DOPA dec 99.5 2.1E-10 5.3E-15 85.5 24.3 298 17-377 5-344 (345)
43 cd06452 SepCysS Sep-tRNA:Cys-t 99.5 2.7E-11 6.8E-16 91.2 19.6 294 50-377 46-358 (361)
44 PRK13393 5-aminolevulinate syn 99.5 4E-10 1E-14 83.8 25.5 315 15-383 49-398 (404)
45 PRK00950 histidinol-phosphate 99.4 9.1E-10 2.3E-14 81.5 25.6 310 14-379 38-368 (369)
46 TIGR00858 bioF 8-amino-7-oxono 99.4 6.5E-11 1.7E-15 88.7 19.2 303 21-376 37-378 (378)
47 PRK09064 5-aminolevulinate syn 99.4 1.3E-09 3.2E-14 80.5 25.5 318 14-385 48-400 (406)
48 PRK05937 8-amino-7-oxononanoat 99.4 1.8E-09 4.6E-14 79.6 26.2 311 13-383 6-352 (370)
49 PRK07310 consensus 99.4 1.1E-09 2.9E-14 80.9 25.0 321 25-383 45-394 (395)
50 PRK08249 cystathionine gamma-s 99.4 3E-10 7.7E-15 84.5 21.7 287 43-385 62-397 (398)
51 PRK13392 5-aminolevulinate syn 99.4 3.2E-09 8.2E-14 78.0 26.9 315 14-383 49-399 (410)
52 PRK09331 Sep-tRNA:Cys-tRNA syn 99.4 1.6E-10 4.2E-15 86.2 20.2 294 50-378 64-377 (386)
53 PRK08776 cystathionine gamma-s 99.4 4.2E-10 1.1E-14 83.6 22.1 290 44-390 59-399 (405)
54 PRK02731 histidinol-phosphate 99.4 1.8E-09 4.7E-14 79.5 25.2 297 26-381 48-366 (367)
55 PRK09028 cystathionine beta-ly 99.4 4.2E-10 1.1E-14 83.6 21.7 287 43-385 59-391 (394)
56 PRK07503 methionine gamma-lyas 99.4 4.2E-10 1.1E-14 83.6 21.3 290 43-386 63-401 (403)
57 PRK09105 putative aminotransfe 99.4 3.4E-09 8.6E-14 77.9 25.8 294 25-380 62-372 (374)
58 PRK06207 aspartate aminotransf 99.4 3.1E-09 7.8E-14 78.1 25.1 327 11-383 38-405 (406)
59 PRK08045 cystathionine gamma-s 99.4 1.2E-09 3E-14 80.8 22.5 285 43-383 50-384 (386)
60 PRK05387 histidinol-phosphate 99.4 3.5E-09 8.9E-14 77.7 24.7 302 25-380 40-352 (353)
61 PRK05764 aspartate aminotransf 99.4 1.4E-09 3.6E-14 80.3 22.5 314 25-383 46-389 (389)
62 PRK07505 hypothetical protein; 99.4 2E-09 5.2E-14 79.3 23.1 307 19-382 61-403 (405)
63 PRK03566 consensus 99.4 4E-09 1E-13 77.4 24.5 295 25-381 47-364 (365)
64 PRK05968 hypothetical protein; 99.4 3.6E-10 9.3E-15 84.0 19.1 284 43-383 61-388 (389)
65 PRK08153 histidinol-phosphate 99.4 3.4E-09 8.5E-14 77.9 23.9 313 13-383 37-368 (370)
66 PRK07049 methionine gamma-lyas 99.4 1.2E-09 3.1E-14 80.7 21.0 276 53-381 88-426 (427)
67 PRK08114 cystathionine beta-ly 99.3 2.5E-09 6.4E-14 78.7 22.0 285 43-382 60-394 (395)
68 PRK05957 aspartate aminotransf 99.3 2E-08 5E-13 73.0 26.4 329 10-381 26-385 (389)
69 PRK01533 histidinol-phosphate 99.3 5E-09 1.3E-13 76.8 23.3 295 25-385 45-359 (366)
70 PRK06507 consensus 99.3 1.6E-08 4.1E-13 73.5 25.9 331 14-381 34-398 (400)
71 PRK05967 cystathionine beta-ly 99.3 3.1E-09 7.8E-14 78.1 21.9 285 43-382 62-389 (392)
72 PRK06234 methionine gamma-lyas 99.3 4E-09 1E-13 77.4 22.4 286 43-382 62-397 (399)
73 PRK08362 consensus 99.3 1.5E-08 3.9E-13 73.7 25.2 317 25-384 41-388 (389)
74 PRK07678 aminotransferase; Val 99.3 9.9E-09 2.5E-13 74.9 24.2 332 24-383 65-451 (451)
75 PRK00011 glyA serine hydroxyme 99.3 1.1E-08 2.9E-13 74.5 24.4 315 23-381 37-388 (415)
76 PRK08064 cystathionine beta-ly 99.3 2E-09 5.2E-14 79.2 20.6 285 43-385 52-386 (390)
77 PRK06107 aspartate aminotransf 99.3 1.2E-08 3.2E-13 74.3 24.6 324 25-383 48-402 (402)
78 PRK07811 cystathionine gamma-s 99.3 5.4E-09 1.4E-13 76.5 22.2 284 43-381 56-385 (386)
79 PRK06917 hypothetical protein; 99.3 2.5E-08 6.3E-13 72.4 25.5 335 24-385 49-441 (447)
80 PRK08861 cystathionine gamma-s 99.3 3.8E-09 9.7E-14 77.5 21.1 286 43-384 51-386 (388)
81 PRK03244 argD acetylornithine 99.3 7.8E-09 2E-13 75.6 22.6 308 24-383 61-396 (398)
82 PRK07212 consensus 99.3 2.1E-08 5.4E-13 72.8 24.7 306 25-379 46-377 (378)
83 PRK07504 O-succinylhomoserine 99.3 5.1E-09 1.3E-13 76.7 21.5 285 43-383 63-397 (397)
84 PRK07543 consensus 99.3 8.5E-09 2.2E-13 75.3 22.6 318 25-382 46-399 (400)
85 cd00610 OAT_like Acetyl ornith 99.3 7.6E-09 1.9E-13 75.6 22.1 319 24-379 54-413 (413)
86 PRK07481 hypothetical protein; 99.3 3.4E-09 8.6E-14 77.9 20.3 334 24-385 60-448 (448)
87 PRK07482 hypothetical protein; 99.3 3E-08 7.6E-13 71.8 25.1 337 24-387 68-460 (461)
88 PRK08361 aspartate aminotransf 99.3 4.8E-08 1.2E-12 70.5 26.1 329 11-381 32-389 (390)
89 PRK05965 hypothetical protein; 99.3 1.7E-08 4.3E-13 73.4 23.5 332 24-384 64-450 (459)
90 PRK07036 hypothetical protein; 99.3 4.2E-08 1.1E-12 70.9 25.6 330 24-387 69-458 (466)
91 PRK06056 consensus 99.3 3.2E-08 8.1E-13 71.7 24.8 333 14-383 37-402 (402)
92 PRK07682 hypothetical protein; 99.3 4.6E-08 1.2E-12 70.7 25.4 313 25-383 35-378 (378)
93 PRK08069 consensus 99.3 2.6E-08 6.7E-13 72.2 24.1 315 25-378 45-388 (390)
94 PTZ00094 serine hydroxymethylt 99.3 1.3E-08 3.2E-13 74.2 22.2 322 27-384 46-408 (450)
95 PRK05166 histidinol-phosphate 99.3 3.9E-08 9.8E-13 71.1 24.6 297 24-380 53-372 (374)
96 PRK08247 cystathionine gamma-s 99.3 4.9E-09 1.2E-13 76.8 19.9 279 44-383 51-366 (366)
97 PRK08593 4-aminobutyrate amino 99.3 4.5E-08 1.1E-12 70.7 24.6 322 24-384 63-435 (448)
98 PRK06148 hypothetical protein; 99.2 2.5E-08 6.3E-13 72.4 23.0 320 24-382 642-1013(1015)
99 pfam00464 SHMT Serine hydroxym 99.2 5.6E-09 1.4E-13 76.5 19.6 311 24-375 33-380 (380)
100 PRK06105 aminotransferase; Pro 99.2 3.9E-08 1E-12 71.1 23.9 334 24-387 66-455 (460)
101 PRK06460 hypothetical protein; 99.2 8.3E-09 2.1E-13 75.4 20.4 282 43-381 43-374 (375)
102 PRK07582 cystathionine gamma-l 99.2 1.9E-08 4.9E-13 73.1 22.3 281 43-382 51-369 (370)
103 COG0076 GadB Glutamate decarbo 99.2 8.8E-09 2.3E-13 75.2 20.4 278 16-315 67-382 (460)
104 PRK03321 putative aminotransfe 99.2 5.6E-08 1.4E-12 70.1 24.4 302 13-377 24-347 (352)
105 PRK05942 aspartate aminotransf 99.2 4.4E-08 1.1E-12 70.7 23.9 322 14-381 38-392 (394)
106 PRK06375 consensus 99.2 3.9E-08 9.9E-13 71.1 23.5 311 25-381 44-380 (381)
107 PRK07683 aminotransferase A; V 99.2 7.6E-08 1.9E-12 69.3 25.0 327 11-382 28-384 (387)
108 PRK03317 histidinol-phosphate 99.2 9.4E-08 2.4E-12 68.7 25.4 296 27-382 43-366 (369)
109 PRK07050 cystathionine beta-ly 99.2 1.4E-08 3.5E-13 74.0 21.2 284 43-381 63-391 (394)
110 PRK11522 putrescine--2-oxoglut 99.2 3.7E-08 9.4E-13 71.3 23.3 323 24-389 109-468 (468)
111 PRK06173 adenosylmethionine--8 99.2 1.3E-07 3.4E-12 67.7 26.1 312 24-382 62-426 (429)
112 PRK08068 transaminase; Reviewe 99.2 5.9E-08 1.5E-12 70.0 24.1 318 12-376 33-384 (389)
113 PRK07030 adenosylmethionine--8 99.2 1.1E-07 2.8E-12 68.2 25.5 335 24-390 65-456 (467)
114 PRK12381 bifunctional succinyl 99.2 4.2E-08 1.1E-12 70.9 23.3 317 24-391 57-406 (406)
115 PRK06938 diaminobutyrate--2-ox 99.2 5.2E-08 1.3E-12 70.3 23.8 325 24-383 81-462 (464)
116 PRK06108 aspartate aminotransf 99.2 6.9E-08 1.8E-12 69.5 24.3 324 11-379 24-380 (382)
117 PRK05794 consensus 99.2 6.4E-08 1.6E-12 69.7 23.8 319 25-381 45-395 (397)
118 TIGR03540 DapC_direct LL-diami 99.2 1.3E-07 3.4E-12 67.7 25.4 306 25-376 44-381 (383)
119 PRK06176 cystathionine gamma-s 99.2 1.9E-08 4.8E-13 73.1 20.8 281 43-381 48-378 (379)
120 PRK07550 hypothetical protein; 99.2 1.5E-07 3.7E-12 67.5 25.3 319 14-376 33-383 (387)
121 PRK02627 acetylornithine amino 99.2 2.6E-08 6.6E-13 72.2 21.5 308 24-382 57-397 (398)
122 cd00609 AAT_like Aspartate ami 99.2 1.6E-07 4E-12 67.3 25.4 287 46-376 38-349 (350)
123 PRK07908 hypothetical protein; 99.2 9.2E-08 2.4E-12 68.7 24.2 312 9-380 19-345 (346)
124 PRK08574 cystathionine gamma-s 99.2 4.8E-08 1.2E-12 70.5 22.7 284 43-381 51-383 (384)
125 PRK06575 consensus 99.2 8.4E-08 2.2E-12 69.0 24.0 321 25-381 46-398 (399)
126 PRK04152 consensus 99.2 1.9E-07 4.8E-12 66.8 25.5 303 15-379 35-364 (364)
127 PRK05964 adenosylmethionine--8 99.2 8.8E-08 2.2E-12 68.9 23.8 318 24-381 60-420 (421)
128 PRK08117 4-aminobutyrate amino 99.2 3.6E-08 9.2E-13 71.3 21.7 316 24-382 59-428 (429)
129 PRK13034 serine hydroxymethylt 99.2 1.1E-08 2.7E-13 74.7 19.0 312 28-381 47-395 (422)
130 PRK08360 4-aminobutyrate amino 99.2 1E-07 2.6E-12 68.5 24.0 322 24-384 59-429 (443)
131 PRK08134 O-acetylhomoserine am 99.2 7.3E-09 1.9E-13 75.7 17.8 305 44-385 63-431 (433)
132 PRK06348 aspartate aminotransf 99.2 3.7E-07 9.5E-12 64.9 26.5 322 10-376 28-380 (383)
133 PRK06916 adenosylmethionine--8 99.2 1E-07 2.6E-12 68.4 23.6 327 24-382 76-458 (462)
134 PRK09044 consensus 99.2 1.4E-07 3.5E-12 67.6 24.3 314 24-381 60-417 (418)
135 PRK06943 adenosylmethionine--8 99.2 1.4E-07 3.7E-12 67.5 24.4 320 24-383 71-447 (452)
136 PRK07812 O-acetylhomoserine am 99.2 5E-09 1.3E-13 76.8 16.9 304 43-384 67-434 (436)
137 PRK02610 histidinol-phosphate 99.2 1.7E-07 4.4E-12 67.0 24.5 297 25-381 40-368 (369)
138 PRK09148 aminotransferase; Val 99.2 1.5E-07 3.9E-12 67.4 24.2 332 14-389 34-399 (406)
139 PRK11658 UDP-4-amino-4-deoxy-L 99.2 1.7E-07 4.3E-12 67.1 24.3 321 28-379 20-377 (379)
140 COG0079 HisC Histidinol-phosph 99.2 2.2E-07 5.6E-12 66.4 24.9 299 25-381 37-354 (356)
141 PRK06702 O-acetylhomoserine am 99.2 2.4E-08 6.1E-13 72.5 20.0 307 43-384 59-427 (432)
142 PRK08443 consensus 99.2 4.8E-07 1.2E-11 64.2 26.6 312 25-381 44-386 (388)
143 PRK03158 histidinol-phosphate 99.2 1.2E-07 3.1E-12 67.9 23.5 305 15-378 33-358 (359)
144 PRK06082 4-aminobutyrate amino 99.2 2.2E-07 5.6E-12 66.4 24.8 325 24-386 90-457 (460)
145 PRK07367 consensus 99.2 1.3E-07 3.4E-12 67.7 23.6 310 25-380 43-383 (385)
146 pfam01212 Beta_elim_lyase Beta 99.2 1.8E-09 4.5E-14 79.7 13.9 238 18-295 8-273 (288)
147 PRK07810 O-succinylhomoserine 99.2 3.5E-08 8.8E-13 71.4 20.5 285 43-379 71-405 (406)
148 PRK06290 aspartate aminotransf 99.2 6E-07 1.5E-11 63.6 27.1 326 14-381 47-402 (411)
149 PRK06767 methionine gamma-lyas 99.2 4.6E-08 1.2E-12 70.7 21.0 283 43-381 59-385 (386)
150 PRK07046 aminotransferase; Val 99.2 9.2E-08 2.3E-12 68.7 22.4 326 24-383 92-451 (452)
151 PRK08912 hypothetical protein; 99.2 5.2E-07 1.3E-11 64.0 26.1 328 10-380 25-385 (387)
152 PRK07483 hypothetical protein; 99.2 2.5E-07 6.3E-12 66.0 24.4 332 24-385 48-441 (443)
153 pfam01053 Cys_Met_Meta_PP Cys/ 99.2 3.5E-08 9E-13 71.4 20.1 280 43-379 50-380 (381)
154 PRK06541 hypothetical protein; 99.2 2.4E-07 6E-12 66.1 24.2 330 24-384 70-458 (460)
155 PRK04612 argD bifunctional N-s 99.2 6.1E-08 1.5E-12 69.9 21.1 313 24-384 58-406 (408)
156 COG3844 Kynureninase [Amino ac 99.2 7E-08 1.8E-12 69.5 21.4 321 36-382 63-403 (407)
157 PRK09276 aspartate aminotransf 99.1 1.1E-07 2.9E-12 68.1 22.4 316 14-376 34-383 (385)
158 PRK07986 adenosylmethionine--8 99.1 1.2E-07 3.1E-12 67.9 22.5 316 24-382 61-424 (428)
159 PRK00451 glycine dehydrogenase 99.1 3E-08 7.7E-13 71.8 19.4 312 43-379 107-448 (449)
160 PRK08466 consensus 99.1 3.2E-07 8.2E-12 65.3 24.6 319 24-383 64-430 (430)
161 PRK06149 hypothetical protein; 99.1 2.6E-07 6.7E-12 65.8 24.0 321 24-381 601-970 (972)
162 PRK07568 aspartate aminotransf 99.1 7.9E-07 2E-11 62.8 26.5 323 14-383 33-394 (396)
163 PRK08248 O-acetylhomoserine am 99.1 5.6E-09 1.4E-13 76.5 15.3 304 43-384 62-430 (431)
164 PRK06062 hypothetical protein; 99.1 1.4E-07 3.6E-12 67.6 22.4 327 24-384 54-431 (434)
165 PRK08133 O-succinylhomoserine 99.1 1.6E-07 4.1E-12 67.2 22.5 283 43-380 59-390 (391)
166 PTZ00125 ornithine aminotransf 99.1 9.2E-08 2.3E-12 68.7 21.2 311 24-382 67-414 (415)
167 PRK07777 aminotransferase; Val 99.1 3.8E-07 9.6E-12 64.8 24.2 324 9-376 22-381 (386)
168 PRK05994 O-acetylhomoserine am 99.1 3.8E-08 9.7E-13 71.2 19.0 301 43-381 61-426 (426)
169 cd00614 CGS_like CGS_like: Cys 99.1 1.5E-07 3.8E-12 67.4 22.0 279 44-379 39-368 (369)
170 PRK05093 argD bifunctional N-s 99.1 2.4E-07 6.1E-12 66.1 22.9 306 24-382 58-401 (403)
171 COG0156 BioF 7-keto-8-aminopel 99.1 4.5E-07 1.1E-11 64.4 24.3 307 19-378 51-387 (388)
172 PRK12403 putative aminotransfe 99.1 3.1E-07 8E-12 65.4 23.5 329 24-383 72-454 (460)
173 cd00378 SHMT Serine-glycine hy 99.1 7.8E-08 2E-12 69.2 20.3 313 23-381 31-385 (402)
174 PRK04635 histidinol-phosphate 99.1 3.2E-07 8.1E-12 65.3 23.4 277 41-379 48-345 (346)
175 PRK03967 histidinol-phosphate 99.1 4.1E-07 1E-11 64.6 24.0 288 25-381 33-334 (337)
176 COG2008 GLY1 Threonine aldolas 99.1 8.2E-08 2.1E-12 69.1 20.3 305 17-378 9-340 (342)
177 PRK07324 transaminase; Validat 99.1 3E-07 7.8E-12 65.4 23.1 284 52-383 66-372 (373)
178 PRK07671 cystathionine beta-ly 99.1 4.6E-08 1.2E-12 70.6 18.7 279 44-380 49-377 (377)
179 PRK08088 4-aminobutyrate amino 99.1 2.3E-07 5.8E-12 66.2 22.3 323 24-383 60-426 (426)
180 COG0399 WecE Predicted pyridox 99.1 3.2E-07 8.1E-12 65.3 23.0 316 27-380 20-372 (374)
181 PRK07309 aromatic amino acid a 99.1 1E-06 2.5E-11 62.2 25.4 328 10-381 29-388 (390)
182 PRK06918 4-aminobutyrate amino 99.1 8.6E-07 2.2E-11 62.6 24.9 320 24-390 73-450 (454)
183 TIGR03588 PseC UDP-4-keto-6-de 99.1 1.9E-07 4.8E-12 66.8 21.5 319 28-378 16-379 (380)
184 PRK05630 adenosylmethionine--8 99.1 4.6E-07 1.2E-11 64.3 23.4 314 24-380 60-421 (423)
185 PRK05613 O-acetylhomoserine am 99.1 1.4E-07 3.5E-12 67.6 20.7 302 43-381 67-436 (437)
186 PRK13360 omega amino acid--pyr 99.1 6.2E-07 1.6E-11 63.5 24.0 322 24-382 63-440 (441)
187 PRK07337 aminotransferase; Val 99.1 1.3E-06 3.3E-11 61.5 25.6 316 25-378 45-386 (388)
188 TIGR01821 5aminolev_synth 5-am 99.1 2.4E-08 6.1E-13 72.4 16.7 307 23-385 61-425 (427)
189 PRK07681 aspartate aminotransf 99.1 9.5E-07 2.4E-11 62.3 24.9 326 14-386 35-395 (399)
190 PRK07894 consensus 99.1 2.1E-07 5.3E-12 66.5 21.5 315 24-382 69-429 (430)
191 PRK04260 acetylornithine amino 99.1 2.5E-07 6.3E-12 66.0 21.8 303 24-379 46-375 (375)
192 PRK07392 threonine-phosphate d 99.1 7.4E-07 1.9E-11 63.0 24.1 307 14-381 25-357 (358)
193 PRK09792 PLP-dependent GABA am 99.1 7.3E-07 1.9E-11 63.0 24.1 319 24-381 58-421 (421)
194 PRK07495 4-aminobutyrate amino 99.1 6.3E-07 1.6E-11 63.4 23.7 323 24-384 56-422 (422)
195 PRK06220 consensus 99.1 1.2E-06 3E-11 61.7 25.1 326 14-383 34-382 (384)
196 PRK07480 putative aminotransfe 99.1 1E-06 2.6E-11 62.1 24.7 327 24-384 71-454 (459)
197 PRK06209 glutamate-1-semialdeh 99.1 4.9E-08 1.2E-12 70.5 17.8 326 24-389 66-413 (431)
198 PRK06084 O-acetylhomoserine am 99.1 1.9E-08 4.8E-13 73.1 15.6 302 43-382 56-423 (424)
199 PRK09264 diaminobutyrate--2-ox 99.1 5E-07 1.3E-11 64.0 22.8 322 24-391 57-426 (426)
200 PRK02936 argD acetylornithine 99.1 3E-07 7.7E-12 65.5 21.5 298 24-379 47-377 (377)
201 PRK07366 succinyldiaminopimela 99.1 1.2E-06 3E-11 61.7 24.5 319 14-376 33-385 (388)
202 TIGR03246 arg_catab_astC succi 99.1 2.9E-07 7.3E-12 65.6 21.3 309 24-382 53-396 (397)
203 PRK03262 consensus 99.1 1E-06 2.6E-11 62.1 24.1 279 41-376 52-351 (355)
204 PRK06358 threonine-phosphate d 99.0 7.7E-07 2E-11 62.9 23.0 294 25-379 34-353 (354)
205 PRK00854 rocD ornithine--oxo-a 99.0 2.1E-07 5.2E-12 66.5 20.0 306 24-380 62-403 (404)
206 PRK04781 histidinol-phosphate 99.0 1.4E-06 3.6E-11 61.2 24.2 282 41-380 52-360 (362)
207 PRK06777 4-aminobutyrate amino 99.0 8.2E-07 2.1E-11 62.7 23.0 320 24-380 58-420 (421)
208 PRK08636 aspartate aminotransf 99.0 1.3E-06 3.3E-11 61.4 23.9 327 14-384 36-403 (403)
209 COG0436 Aspartate/tyrosine/aro 99.0 3.7E-07 9.4E-12 64.9 21.1 328 12-380 29-390 (393)
210 pfam01041 DegT_DnrJ_EryC1 DegT 99.0 4.9E-07 1.2E-11 64.1 21.5 299 47-376 24-363 (363)
211 PRK01688 histidinol-phosphate 99.0 1.8E-06 4.6E-11 60.5 24.4 278 41-376 52-351 (355)
212 TIGR02006 IscS cysteine desulf 99.0 1.4E-07 3.7E-12 67.5 18.7 329 22-384 14-382 (404)
213 PRK05939 hypothetical protein; 99.0 9.1E-08 2.3E-12 68.8 17.6 298 43-380 44-394 (396)
214 PRK07323 consensus 99.0 1.1E-06 2.7E-11 62.0 22.9 313 24-382 76-443 (443)
215 PRK09221 beta alanine--pyruvat 99.0 1.4E-06 3.6E-11 61.2 23.3 212 137-382 217-444 (445)
216 PRK08363 alanine aminotransfer 99.0 2.8E-06 7.1E-11 59.3 24.8 328 14-380 33-393 (398)
217 TIGR02539 SepCysS Sep-tRNA:Cys 99.0 1.7E-08 4.2E-13 73.5 13.2 308 44-381 51-379 (381)
218 COG0112 GlyA Glycine/serine hy 99.0 3E-07 7.6E-12 65.5 19.6 313 28-383 42-392 (413)
219 PRK06434 cystathionine gamma-l 99.0 3.4E-07 8.6E-12 65.2 19.7 281 43-381 62-384 (384)
220 PRK02769 histidine decarboxyla 99.0 6.5E-07 1.7E-11 63.3 21.1 295 29-376 47-367 (380)
221 PRK06931 diaminobutyrate--2-ox 99.0 2.9E-06 7.3E-11 59.2 24.3 323 24-383 71-451 (454)
222 TIGR03372 putres_am_tran putre 99.0 3.5E-07 8.8E-12 65.1 19.6 313 24-379 93-442 (442)
223 PRK06836 aspartate aminotransf 99.0 2.5E-06 6.4E-11 59.6 23.8 326 13-383 36-394 (396)
224 TIGR03537 DapC succinyldiamino 99.0 3.3E-06 8.5E-11 58.8 26.1 303 25-376 15-348 (350)
225 COG0160 GabT 4-aminobutyrate a 99.0 2.2E-06 5.7E-11 59.9 23.5 320 24-382 74-446 (447)
226 cd00616 AHBA_syn 3-amino-5-hyd 99.0 5.2E-07 1.3E-11 64.0 20.2 309 28-376 5-352 (352)
227 PRK03715 argD bifunctional N-s 99.0 1.8E-06 4.6E-11 60.5 22.9 308 24-382 54-394 (395)
228 PRK00062 glutamate-1-semialdeh 99.0 8.5E-07 2.2E-11 62.6 21.0 323 24-383 70-428 (429)
229 COG4992 ArgD Ornithine/acetylo 99.0 5.6E-07 1.4E-11 63.7 19.8 312 24-384 60-401 (404)
230 PRK05639 4-aminobutyrate amino 99.0 3.5E-06 8.8E-11 58.7 23.8 320 24-384 71-446 (457)
231 PRK00615 glutamate-1-semialdeh 99.0 6.2E-07 1.6E-11 63.5 20.0 322 24-382 71-429 (433)
232 pfam00282 Pyridoxal_deC Pyrido 99.0 5.5E-07 1.4E-11 63.8 19.6 283 15-313 44-370 (370)
233 cd00613 GDC-P Glycine cleavage 99.0 2.2E-06 5.5E-11 60.0 22.5 327 25-375 35-398 (398)
234 PRK06058 4-aminobutyrate amino 99.0 6.4E-07 1.6E-11 63.4 19.8 291 52-382 103-446 (446)
235 PRK05769 4-aminobutyrate amino 99.0 1.8E-06 4.5E-11 60.6 22.0 313 24-382 73-441 (442)
236 PRK09082 putative aminotransfe 99.0 4.5E-06 1.1E-10 58.0 24.8 322 10-375 29-383 (386)
237 PRK07269 cystathionine gamma-s 99.0 8.1E-07 2.1E-11 62.7 20.1 276 43-379 52-362 (364)
238 PRK08742 adenosylmethionine--8 99.0 4.7E-06 1.2E-10 57.9 25.6 326 24-383 82-469 (472)
239 PRK11706 TDP-4-oxo-6-deoxy-D-g 98.9 3E-06 7.7E-11 59.1 22.8 317 27-379 16-374 (375)
240 PRK06959 putative threonine-ph 98.9 3.8E-06 9.8E-11 58.4 23.3 268 51-385 56-337 (339)
241 PRK08175 aminotransferase; Val 98.9 5.1E-06 1.3E-10 57.6 26.6 313 25-381 44-389 (395)
242 PRK12389 glutamate-1-semialdeh 98.9 3.1E-07 7.9E-12 65.4 17.5 321 24-382 71-428 (429)
243 COG0626 MetC Cystathionine bet 98.9 1.2E-06 3.1E-11 61.6 19.8 289 40-382 58-395 (396)
244 PRK06942 glutamate-1-semialdeh 98.9 6.7E-07 1.7E-11 63.3 18.4 319 24-382 68-425 (425)
245 PRK08960 hypothetical protein; 98.9 7E-06 1.8E-10 56.8 25.9 323 14-379 35-385 (387)
246 PRK13580 serine hydroxymethylt 98.9 8.1E-07 2.1E-11 62.7 18.3 313 27-383 66-449 (493)
247 PRK05664 threonine-phosphate d 98.9 4.3E-06 1.1E-10 58.1 21.9 260 52-382 53-328 (330)
248 PRK08056 threonine-phosphate d 98.9 2.2E-06 5.7E-11 59.9 20.5 296 25-380 35-354 (356)
249 PRK01278 argD bifunctional N-s 98.9 2.1E-06 5.4E-11 60.1 20.2 302 24-381 49-388 (389)
250 PRK06425 histidinol-phosphate 98.9 6.3E-06 1.6E-10 57.1 22.5 276 41-379 35-331 (332)
251 TIGR01141 hisC histidinol-phos 98.9 3.9E-06 9.8E-11 58.4 21.3 297 25-377 43-376 (377)
252 COG1103 Archaea-specific pyrid 98.9 8.2E-07 2.1E-11 62.7 17.8 296 50-379 63-378 (382)
253 PRK04073 rocD ornithine--oxo-a 98.9 6E-06 1.5E-10 57.2 22.2 300 24-379 58-395 (396)
254 PRK08555 consensus 98.8 5.6E-06 1.4E-10 57.4 21.3 313 24-381 70-442 (443)
255 pfam01276 OKR_DC_1 Orn/Lys/Arg 98.8 3E-06 7.7E-11 59.1 19.6 218 47-291 65-318 (417)
256 PRK08297 L-lysine aminotransfe 98.8 1.4E-05 3.5E-10 54.9 23.1 296 41-382 94-448 (449)
257 PRK07778 consensus 98.8 1.6E-05 4.2E-10 54.4 23.5 321 13-376 32-381 (386)
258 TIGR01825 gly_Cac_T_rel pyrido 98.8 6.6E-06 1.7E-10 56.9 20.1 310 24-383 49-390 (392)
259 PRK08354 putative aminotransfe 98.7 2.4E-05 6.1E-10 53.4 24.1 275 26-376 23-307 (312)
260 PRK09265 aminotransferase AlaT 98.7 2.5E-05 6.3E-10 53.3 24.8 324 25-383 51-403 (404)
261 TIGR01885 Orn_aminotrans ornit 98.7 1.3E-05 3.2E-10 55.1 20.1 307 24-376 60-423 (426)
262 cd00615 Orn_deC_like Ornithine 98.7 2.3E-06 5.9E-11 59.8 15.5 213 47-288 58-293 (294)
263 TIGR01822 2am3keto_CoA 2-amino 98.7 2.3E-06 5.9E-11 59.9 15.1 305 19-382 52-392 (395)
264 TIGR03539 DapC_actino succinyl 98.7 3.7E-05 9.3E-10 52.2 25.0 299 14-370 24-351 (357)
265 TIGR01326 OAH_OAS_sulfhy O-ace 98.7 2.4E-07 6E-12 66.1 9.1 219 58-295 64-325 (434)
266 KOG1404 consensus 98.6 4.3E-05 1.1E-09 51.8 20.2 327 24-385 68-441 (442)
267 COG2873 MET17 O-acetylhomoseri 98.6 1.9E-05 4.8E-10 54.0 17.6 285 70-381 80-425 (426)
268 PRK12414 putative aminotransfe 98.6 6.4E-05 1.6E-09 50.7 24.0 319 10-373 28-379 (384)
269 TIGR03538 DapC_gpp succinyldia 98.6 7E-05 1.8E-09 50.4 25.8 315 14-376 32-391 (394)
270 TIGR03251 LAT_fam L-lysine 6-t 98.6 7.5E-05 1.9E-09 50.2 20.1 292 41-378 78-431 (431)
271 KOG0257 consensus 98.6 5.2E-05 1.3E-09 51.2 19.1 331 16-390 36-410 (420)
272 PRK08637 hypothetical protein; 98.6 8.3E-05 2.1E-09 49.9 22.8 296 43-383 46-386 (386)
273 COG0161 BioA Adenosylmethionin 98.5 0.00011 2.7E-09 49.2 22.0 324 24-385 62-447 (449)
274 PRK09147 aminotransferase; Pro 98.5 0.00012 3E-09 49.0 24.1 316 14-378 32-394 (397)
275 KOG0053 consensus 98.5 1.2E-05 3E-10 55.4 13.6 205 51-294 80-298 (409)
276 KOG1402 consensus 98.5 0.00015 3.9E-09 48.3 19.1 308 24-379 77-425 (427)
277 KOG1360 consensus 98.4 8.5E-05 2.2E-09 49.9 17.3 307 24-386 187-529 (570)
278 KOG1359 consensus 98.4 2.6E-05 6.7E-10 53.1 14.5 316 14-382 70-413 (417)
279 TIGR03542 DAPAT_plant LL-diami 98.4 6.6E-05 1.7E-09 50.6 16.6 326 14-378 36-401 (402)
280 TIGR02407 ectoine_ectB diamino 98.4 1.9E-05 4.9E-10 54.0 13.8 282 44-380 81-412 (413)
281 COG1167 ARO8 Transcriptional r 98.4 0.00022 5.5E-09 47.3 25.9 327 11-382 89-456 (459)
282 KOG2467 consensus 98.4 7.5E-05 1.9E-09 50.2 15.8 323 42-384 79-429 (477)
283 COG0001 HemL Glutamate-1-semia 98.4 0.00027 6.8E-09 46.7 18.4 297 55-384 100-431 (432)
284 TIGR01437 selA_rel pyridoxal p 98.4 3.2E-05 8.1E-10 52.6 13.6 327 19-380 22-388 (391)
285 PRK09440 avtA valine--pyruvate 98.3 0.0003 7.7E-09 46.4 26.0 335 5-382 24-412 (416)
286 PRK06855 aminotransferase; Val 98.3 0.00034 8.7E-09 46.1 21.8 253 24-299 49-334 (433)
287 COG1982 LdcC Arginine/lysine/o 98.3 0.00024 6.1E-09 47.0 16.9 289 49-376 71-403 (557)
288 KOG1401 consensus 98.3 0.00037 9.6E-09 45.8 20.7 325 17-382 69-431 (433)
289 pfam02347 GDC-P Glycine cleava 98.3 0.00045 1.1E-08 45.3 20.5 301 46-374 108-428 (429)
290 TIGR01329 cysta_beta_ly_E cyst 98.2 9.5E-05 2.4E-09 49.6 14.1 216 41-296 44-286 (415)
291 PRK04013 argD acetylornithine/ 98.2 0.0003 7.6E-09 46.4 16.4 287 24-382 42-361 (364)
292 KOG1357 consensus 98.2 0.00019 4.7E-09 47.7 15.3 316 17-382 152-503 (519)
293 PRK09257 aromatic amino acid a 98.2 0.00052 1.3E-08 44.9 18.6 313 10-379 25-396 (397)
294 PRK07590 L,L-diaminopimelate a 98.2 0.00054 1.4E-08 44.8 20.8 329 12-376 35-406 (409)
295 KOG1368 consensus 98.2 0.0004 1E-08 45.6 16.7 308 22-383 32-370 (384)
296 TIGR00707 argD acetylornithine 98.2 0.00056 1.4E-08 44.7 20.2 310 24-379 47-401 (402)
297 pfam00202 Aminotran_3 Aminotra 98.2 0.00014 3.7E-09 48.4 14.0 235 24-290 34-316 (338)
298 PRK07865 N-succinyldiaminopime 98.2 0.00067 1.7E-08 44.2 26.3 306 13-375 29-362 (364)
299 KOG3846 consensus 98.1 0.00079 2E-08 43.7 16.6 329 40-382 101-462 (465)
300 pfam03841 SelA L-seryl-tRNA se 98.1 0.0007 1.8E-08 44.1 15.4 187 19-217 14-236 (367)
301 COG1921 SelA Selenocysteine sy 98.1 0.00055 1.4E-08 44.7 14.8 214 20-266 36-272 (395)
302 TIGR01328 met_gam_lyase methio 98.1 3.1E-05 7.9E-10 52.7 8.4 209 43-294 57-282 (392)
303 COG0403 GcvP Glycine cleavage 98.0 0.0013 3.3E-08 42.4 20.2 307 46-378 118-447 (450)
304 PRK05839 hypothetical protein; 98.0 0.0014 3.7E-08 42.1 26.3 307 14-376 27-369 (376)
305 COG1448 TyrB Aspartate/tyrosin 97.9 0.00076 2E-08 43.8 13.8 260 70-378 97-395 (396)
306 COG1168 MalY Bifunctional PLP- 97.8 0.0027 6.9E-08 40.3 17.9 308 24-376 40-385 (388)
307 PRK13578 ornithine decarboxyla 97.8 0.0035 8.8E-08 39.7 21.7 302 49-376 175-560 (720)
308 TIGR01814 kynureninase kynuren 97.6 0.0031 8E-08 39.9 12.8 316 43-379 81-443 (444)
309 PRK04311 selenocysteine syntha 97.5 0.008 2E-07 37.3 18.0 158 51-217 132-318 (465)
310 TIGR01265 tyr_nico_aTase tyros 97.5 0.0099 2.5E-07 36.8 16.3 281 56-376 102-417 (424)
311 PRK04366 glycine dehydrogenase 97.4 0.01 2.6E-07 36.6 19.8 313 45-384 112-454 (490)
312 TIGR01325 O_suc_HS_sulf O-succ 97.4 0.0015 3.7E-08 42.1 8.6 230 45-317 54-311 (386)
313 PRK13355 bifunctional HTH-doma 97.3 0.015 3.8E-07 35.6 22.0 279 68-380 210-513 (518)
314 PRK12566 glycine dehydrogenase 97.0 0.028 7.1E-07 33.9 21.4 292 51-375 127-438 (954)
315 PRK05367 glycine dehydrogenase 96.9 0.037 9.5E-07 33.1 19.6 293 51-376 128-441 (955)
316 KOG0256 consensus 96.9 0.039 9.9E-07 33.0 20.1 303 40-380 120-460 (471)
317 TIGR00713 hemL glutamate-1-sem 96.7 0.047 1.2E-06 32.4 12.9 212 137-381 199-433 (434)
318 TIGR00474 selA L-seryl-tRNA se 96.6 0.057 1.5E-06 31.9 13.3 300 37-376 104-447 (448)
319 TIGR00709 dat 2,4-diaminobutyr 95.8 0.15 3.8E-06 29.3 12.8 325 28-385 60-442 (445)
320 KOG0629 consensus 95.8 0.15 3.9E-06 29.2 15.5 338 26-379 120-507 (510)
321 KOG1358 consensus 95.4 0.21 5.4E-06 28.3 17.0 288 49-378 140-462 (467)
322 KOG0259 consensus 94.8 0.32 8.1E-06 27.2 20.8 275 70-376 129-428 (447)
323 pfam05889 SLA_LP_auto_ag Solub 94.7 0.33 8.4E-06 27.1 14.5 166 43-210 51-240 (389)
324 TIGR01324 cysta_beta_ly_B cyst 94.6 0.37 9.4E-06 26.8 13.6 296 39-380 49-387 (389)
325 KOG2040 consensus 94.0 0.49 1.2E-05 26.0 12.3 283 56-375 171-477 (1001)
326 TIGR02080 O_succ_thio_ly O-suc 92.9 0.73 1.9E-05 24.9 10.3 286 39-381 45-382 (383)
327 pfam06838 Alum_res Aluminium r 92.5 0.81 2.1E-05 24.6 12.6 260 27-316 29-322 (405)
328 TIGR03576 pyridox_MJ0158 pyrid 92.1 0.92 2.3E-05 24.3 20.7 258 43-359 52-324 (346)
329 KOG1383 consensus 90.6 1.3 3.3E-05 23.4 18.8 303 44-385 116-450 (491)
330 KOG1411 consensus 90.1 1.4 3.6E-05 23.1 11.3 260 71-381 126-425 (427)
331 TIGR03531 selenium_SpcS O-phos 90.0 1.4 3.7E-05 23.0 19.3 165 43-209 100-289 (444)
332 pfam04864 Alliinase_C Allinase 89.1 1.7 4.3E-05 22.6 22.8 292 49-376 47-360 (363)
333 TIGR01788 Glu-decarb-GAD gluta 83.1 3.4 8.7E-05 20.6 18.5 316 44-380 84-490 (493)
334 KOG0634 consensus 71.3 7.5 0.00019 18.5 19.7 165 44-213 100-315 (472)
335 COG1003 GcvP Glycine cleavage 70.6 7.7 0.0002 18.4 20.5 314 46-385 107-451 (496)
336 cd01013 isochorismatase Isocho 69.1 7.6 0.00019 18.4 3.9 122 51-177 53-183 (203)
337 TIGR00461 gcvP glycine dehydro 68.4 8.6 0.00022 18.1 10.0 271 74-376 137-444 (965)
338 TIGR02237 recomb_radB DNA repa 67.9 6.1 0.00015 19.0 3.2 94 73-180 21-121 (223)
339 KOG0628 consensus 67.9 8.8 0.00023 18.0 17.4 317 43-384 108-474 (511)
340 KOG1412 consensus 62.8 11 0.00028 17.4 14.0 325 10-385 29-409 (410)
341 PRK13942 protein-L-isoaspartat 62.6 11 0.00028 17.4 7.7 69 54-123 65-135 (214)
342 COG1611 Predicted Rossmann fol 60.5 12 0.00031 17.1 4.5 52 40-95 23-74 (205)
343 pfam09659 Cas_Csm6 CRISPR-asso 51.5 17 0.00043 16.2 4.7 49 40-91 17-67 (382)
344 TIGR01264 tyr_amTase_E tyrosin 49.7 18 0.00046 16.0 5.4 322 12-370 41-406 (415)
345 TIGR01140 CobD L-threonine-O-3 49.4 18 0.00047 16.0 18.5 306 13-377 7-348 (349)
346 PRK07206 hypothetical protein; 43.5 23 0.00057 15.4 3.0 16 162-177 199-214 (415)
347 cd01394 radB RadB. The archaea 42.2 24 0.0006 15.3 3.1 20 161-180 102-121 (218)
348 PRK13972 glutathione S-transfe 41.2 18 0.00046 16.0 1.9 22 269-290 126-147 (215)
349 cd00617 Tnase_like Tryptophana 39.7 26 0.00066 15.1 12.8 300 41-383 50-410 (431)
350 cd03148 GATase1_EcHsp31_like T 39.3 26 0.00067 15.0 2.6 34 97-132 20-56 (232)
351 pfam01135 PCMT Protein-L-isoas 38.1 27 0.0007 14.9 7.7 70 53-123 61-132 (205)
352 cd00764 Eukaryotic_PFK Phospho 38.0 27 0.0007 14.9 4.5 77 40-116 360-444 (762)
353 COG3977 Alanine-alpha-ketoisov 37.9 27 0.0007 14.9 19.2 332 7-382 26-416 (417)
354 COG4100 Cystathionine beta-lya 37.9 27 0.0007 14.9 5.3 182 28-215 40-257 (416)
355 pfam04048 Sec8_exocyst Sec8 ex 37.8 28 0.0007 14.9 4.3 34 29-62 28-61 (142)
356 PRK13534 7-cyano-7-deazaguanin 37.5 28 0.00071 14.9 2.4 95 3-120 22-120 (630)
357 pfam10100 DUF2338 Uncharacteri 36.7 29 0.00073 14.8 5.2 111 15-126 6-149 (429)
358 TIGR00462 genX lysyl-tRNA synt 34.2 31 0.0008 14.5 3.2 23 43-65 126-148 (330)
359 TIGR00763 lon ATP-dependent pr 33.5 14 0.00036 16.8 0.4 86 25-113 504-612 (941)
360 pfam01209 Ubie_methyltran ubiE 33.5 32 0.00082 14.4 6.1 55 54-111 36-90 (233)
361 TIGR00700 GABAtrnsam 4-aminobu 33.4 32 0.00082 14.4 11.1 206 138-379 200-425 (427)
362 TIGR00954 3a01203 Peroxysomal 33.4 17 0.00043 16.2 0.8 27 182-208 555-586 (788)
363 smart00828 PKS_MT Methyltransf 33.0 33 0.00084 14.4 2.5 37 160-197 95-131 (224)
364 pfam00996 GDI GDP dissociation 32.9 33 0.00084 14.4 2.6 41 64-107 2-45 (439)
365 TIGR02478 6PF1K_euk 6-phosphof 31.9 34 0.00087 14.3 2.5 160 41-214 369-559 (777)
366 PRK08085 gluconate 5-dehydroge 31.3 35 0.00089 14.2 2.1 38 58-97 2-39 (254)
367 PRK08317 hypothetical protein; 31.3 35 0.00089 14.2 6.4 47 50-97 4-50 (241)
368 TIGR01393 lepA GTP-binding pro 29.6 20 0.00052 15.7 0.7 39 50-89 140-182 (598)
369 KOG1201 consensus 29.6 37 0.00095 14.0 5.0 162 47-212 15-194 (300)
370 PRK08277 D-mannonate oxidoredu 28.3 39 0.001 13.9 4.6 63 57-122 2-66 (278)
371 TIGR00928 purB adenylosuccinat 28.0 33 0.00084 14.4 1.5 46 35-84 156-209 (469)
372 TIGR02442 Cob-chelat-sub cobal 27.8 25 0.00064 15.1 0.9 43 164-206 511-571 (688)
373 pfam06070 Herpes_UL32 Herpesvi 27.7 40 0.001 13.8 11.8 20 41-60 255-274 (777)
374 TIGR02081 metW methionine bios 27.7 25 0.00063 15.2 0.8 92 56-153 3-99 (205)
375 PRK10294 6-phosphofructokinase 27.6 41 0.001 13.8 6.4 48 73-121 36-84 (309)
376 PRK06935 2-deoxy-D-gluconate 3 27.4 41 0.001 13.8 5.2 37 59-97 9-45 (258)
377 pfam01488 Shikimate_DH Shikima 27.0 42 0.0011 13.7 7.6 110 56-181 2-113 (134)
378 TIGR00438 rrmJ ribosomal RNA l 26.5 42 0.0011 13.7 2.4 94 85-188 27-130 (192)
379 cd03062 TRX_Fd_Sucrase TRX-lik 25.4 44 0.0011 13.6 3.2 33 344-376 46-83 (97)
380 pfam04127 DFP DNA / pantothena 24.4 46 0.0012 13.4 3.7 76 97-178 26-101 (197)
381 PRK08213 gluconate 5-dehydroge 24.2 47 0.0012 13.4 4.2 40 56-97 3-42 (259)
382 cd00411 Asparaginase Asparagin 24.2 47 0.0012 13.4 5.0 55 40-100 58-113 (323)
383 pfam06745 KaiC KaiC. This fami 24.0 47 0.0012 13.4 2.1 58 56-113 7-71 (231)
384 PRK07097 gluconate 5-dehydroge 23.9 47 0.0012 13.4 2.8 39 57-97 2-40 (265)
385 PRK06171 sorbitol-6-phosphate 23.7 48 0.0012 13.4 2.0 38 58-97 2-39 (266)
386 PRK13533 7-cyano-7-deazaguanin 23.2 49 0.0012 13.3 2.8 66 3-80 23-92 (486)
387 TIGR01931 cysJ sulfite reducta 22.9 35 0.00088 14.3 0.8 155 168-376 447-618 (628)
388 TIGR01133 murG undecaprenyldip 22.4 50 0.0013 13.2 1.6 24 68-91 6-32 (368)
389 PRK08367 porA pyruvate ferredo 22.2 51 0.0013 13.2 6.3 27 354-380 350-377 (395)
390 PRK09275 aspartate aminotransf 22.1 47 0.0012 13.4 1.4 317 58-388 154-528 (531)
391 KOG4044 consensus 21.9 44 0.0011 13.6 1.2 51 130-180 97-147 (201)
392 TIGR02347 chap_CCT_zeta T-comp 21.6 53 0.0013 13.1 2.8 63 280-345 357-421 (548)
393 TIGR00611 recf DNA replication 21.5 32 0.00083 14.4 0.5 74 279-361 230-305 (399)
394 PRK13397 3-deoxy-7-phosphohept 21.5 53 0.0013 13.1 9.0 164 1-179 1-200 (250)
395 KOG4181 consensus 21.3 33 0.00084 14.4 0.5 30 359-388 395-424 (491)
396 KOG1405 consensus 20.7 55 0.0014 13.0 10.4 202 138-380 271-482 (484)
397 cd01015 CSHase N-carbamoylsarc 20.7 27 0.0007 14.9 -0.1 78 97-175 71-153 (179)
398 PRK13943 protein-L-isoaspartat 20.6 55 0.0014 13.0 7.8 70 53-123 63-134 (317)
399 TIGR02153 gatD_arch glutamyl-t 20.5 55 0.0014 12.9 4.2 115 45-179 127-249 (413)
400 PRK06416 dihydrolipoamide dehy 20.3 56 0.0014 12.9 3.3 32 92-124 173-205 (462)
401 TIGR02774 rexB_recomb ATP-depe 20.1 56 0.0014 12.9 2.0 37 162-198 185-229 (1116)
No 1
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=659.27 Aligned_cols=379 Identities=56% Similarity=0.973 Sum_probs=355.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
Q ss_conf 98765564689988868887768968999986321036532898899999999999999968899857999748734899
Q gi|254780153|r 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAV 80 (391)
Q Consensus 1 ~~~~~~~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ 80 (391)
|+..-+|.++|.+|+||+|||.++|+|.+.++..++||+||||++|.+++++++++||+||++|+||+|+|+|||||+||
T Consensus 1 ~~~~~~~~~~P~~~~F~~GPs~~~p~~~l~~l~~sile~SHRs~~f~~i~~~a~~~lr~Ll~iPddY~Vlfl~GGaT~qf 80 (381)
T PRK03080 1 MTLTIPPALRPADPRFSSGPCKKRPGWSLDALADALLGRSHRQAPGKAKLGEAIDGTRELLSLPADYEVGIVPGSDTGAV 80 (381)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 98778965679999968888388810216661531112762773899999999999999958999847999678467999
Q ss_pred HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCC-CCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEEC
Q ss_conf 9875320578970799707368888876532387-630674057776578676785565799742024202203203502
Q gi|254780153|r 81 EMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSL-QDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIP 159 (391)
Q Consensus 81 ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~ 159 (391)
+++++||++++...++++|.||++|++++.+... .++.+...++|..+++..++...++++|||||++|++.|....++
T Consensus 81 ~~i~~nLl~~~~~~~~~~G~fs~kwa~~a~~~~~~~~~~v~~a~~g~iP~~~~~~~~~d~~~t~NeTi~Gv~~p~~~~~~ 160 (381)
T PRK03080 81 EMALWSLLGARRVDHLAWESFGAKWATDVVKQLKLEDPRVLKADYGELPDLSAVDFDVDVVFTWNGTTSGVRVPNADWIG 160 (381)
T ss_pred HHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCCCEEEEECCCEEEEECCCCCCCC
T ss_conf 99987455777772787431446999999974366761587057777888123376564798735640108746767788
Q ss_pred CCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf 56861488640110110254556857999700120017665154456778887654114457783123200112321033
Q gi|254780153|r 160 ESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239 (391)
Q Consensus 160 ~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (391)
...+.++|+||+|+++++|+|++++|++|+|+|||||+|+|++++++||+|++|.+...+.+++|.+|+|..+.++.++.
T Consensus 161 ~~~~~llv~D~SS~i~s~~iD~sk~dviyagaQKnlG~~aGl~vvI~sp~al~r~~~~~~~r~iP~~l~~~~~~~a~e~~ 240 (381)
T PRK03080 161 ADREGLTICDATSAAFALPLDWAKLDVYTFSWQKVLGGEGGHGMLILSPRAVERLESYAPAWPLPKIFRLTKGGKLIENI 240 (381)
T ss_pred CCCCCCEEEECHHHHCCCCCCHHHCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 88886278743244436767855742799870002578774279997699998886138877884464245578887646
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 47864466644889999999986201031899999999779999999874797167668820036531789824731011
Q gi|254780153|r 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS 319 (391)
Q Consensus 240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~ 319 (391)
.++||+||||++.||.+..+|+|++++||++++.+|++++++.||+|+|+++++.+++.+++.||++|+||++.|+.
T Consensus 241 ~~~s~~NTPp~f~iy~~~~~l~Wl~~~GGl~~~~~rn~~ka~lLY~~id~s~~~~~~v~d~~~RS~~nv~f~~~d~~--- 317 (381)
T PRK03080 241 FKGQTINTPSMLTVEDYLDQLDWAKSIGGLDALIARTAANSSVLYDWAEKTPWATPLAADPATRSNTSVCLDFVDPA--- 317 (381)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCH---
T ss_conf 53464899618999999999999997288999999999999999999970887433668844523764899945805---
Q ss_pred CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 373456788899999888628287266556767505686158889999999999999999999998
Q gi|254780153|r 320 LDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
..+..+.+.+...+++|+++++++|||+...|||||+|++++.+||++|+.||||+|.++|..
T Consensus 318 ---~~~~~~~~~~~~~l~~e~g~~di~ghR~~~~GlR~s~y~av~~~dv~aL~~~ld~~~~~~~~~ 380 (381)
T PRK03080 318 ---DAQAAFDKALVAKLLRENGAVDIGPYRDAPNGLRIWCGATVEPSDVEALTPWLDWAFERLKAA 380 (381)
T ss_pred ---HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf ---547999999999999829874565535689855888327789999999999999999998600
No 2
>TIGR01364 serC_1 phosphoserine aminotransferase; InterPro: IPR003248 Phosphoserine aminotransferases (2.6.1.52 from EC) catalyse the conversion of O-phospho-L-serine and oxoglutarate to 3-phosphonooxypyruvate and L-glutamate in the major phosphorylated serine biosynthesis pathway. In bacteria it is also equired for the biosynthesis of pyridoxine. The enzyme requires pyridoxal phosphate as a cofactor, and is part of the aminotransferase class-V family.; GO: 0006564 L-serine biosynthetic process.
Probab=100.00 E-value=0 Score=581.01 Aligned_cols=347 Identities=22% Similarity=0.310 Sum_probs=301.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 88688877689689999863210----------36532898899999999999999968899857999748734899987
Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391)
Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391)
-||+|||+.+ |+.||+.++.++ ||+||||++|.+|+.++.++||+|+++||+|+|+|||||||+||.++
T Consensus 2 ~NF~AGPA~L-P~~VL~~aq~Ellnf~~~G~SVmEiSHRsk~F~~v~~~Ae~dlR~LL~iPd~Y~vLFLQGGAt~QFa~~ 80 (391)
T TIGR01364 2 YNFSAGPAAL-PEEVLEQAQKELLNFNGLGMSVMEISHRSKEFEAVASEAESDLRELLNIPDNYEVLFLQGGATTQFAAV 80 (391)
T ss_pred CCCCCCCCCC-CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
T ss_conf 4478872227-888999999998657517976699853868999999999999998824799826898738724689999
Q ss_pred HHHCCC--CCC------EEEEEECCHHHHHHHHHHHCCC---CCEEEE-----ECCCCCCCCHHHCCCC---CCEEEEE-
Q ss_conf 532057--897------0799707368888876532387---630674-----0577765786767855---6579974-
Q gi|254780153|r 84 LWSLLG--YRG------VDVLAWESFGLGWMSDIRQLSL---QDVREF-----TAPYGSLPDFSKVDFD---RDVVFVW- 143 (391)
Q Consensus 84 ~~nl~~--~~~------~~~~~~g~~~~r~~~~~~~~~~---~~~~~~-----~~~~g~~~~~~~~~~~---~~v~~~h- 143 (391)
|+||+. +++ +.++++|.||.++++++.+++. .++.+. +..++.+|+.+.|+.. ++.+|+|
T Consensus 81 PlNL~~~~~~~~GK~~~A~Y~~TG~WS~kA~~EA~~~~~~~G~~v~~~~~~~~~~~y~~iP~~~~w~~~~~G~~~~Yvh~ 160 (391)
T TIGR01364 81 PLNLLAAKEGKNGKILVADYIVTGAWSKKALKEAKKLGNPLGVEVNVVASGEEEGNYTKIPDQSEWEISEDGEDAAYVHY 160 (391)
T ss_pred HHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99889753699985788500221758899999988604304656776142000578642777021232778787466572
Q ss_pred --EECCCCEEEC-CEEEECC-CCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC--
Q ss_conf --2024202203-2035025-686148864011011025455685799970012001766515445677888765411--
Q gi|254780153|r 144 --NGTTSGVCVP-DVGFIPE-SREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY-- 217 (391)
Q Consensus 144 --~ETstGv~~~-~~~~~~~-~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~-- 217 (391)
|||..||+.+ ..+.... ..+++||+|++|+|.++|+|+.++|++|||+|||+ ||+|+++|+++++.|+|....
T Consensus 161 c~NETi~Gvef~P~~P~~~~~~Pn~~LVaDmSS~ilSR~~Dvs~fglIYAGAQKN~-GpaG~TvVIvR~DLLgr~~~~~L 239 (391)
T TIGR01364 161 CANETIHGVEFRPELPEVKNKDPNAPLVADMSSNILSRPIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASDAEL 239 (391)
T ss_pred CCCCCCCCEEECCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCEEEEEHHHCC-CCCEEEEEEECCHHHCCCCCCCH
T ss_conf 57871102166476886788897526885154323157678511355750032120-53226899981144156762302
Q ss_pred --CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf --445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r 218 --VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN 295 (391)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~ 295 (391)
-.-...|+.|+|..+.+ ++|++||||||.||.+.++++|++++||++++.+++++||++||+.||++++|+.
T Consensus 240 H~L~vP~~P~~~~Y~~~~~------~~SmYNTPPtF~iY~~~LVf~Wlk~~GGv~~~e~~N~~KA~LLY~~ID~S~gFY~ 313 (391)
T TIGR01364 240 HKLGVPITPSMLNYKIHAE------NDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDAIDNSNGFYR 313 (391)
T ss_pred HHCCCCCCCCCCCHHHHHH------CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 0166659784132189886------3887334025899987889999986062899999989999999999864898011
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 66882003653178982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r 296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
...+|+.||.|||||++++.. .+.+.+..|+++. ++.+.++|+|||++| |||+|.||+++.|.|++|++.+
T Consensus 314 ~~v~k~~RS~MNV~F~~~~~~---G~~eLe~~Fl~eA-----~~~gl~~LKGHRsVG-G~RASiYNA~ple~Vq~Lv~FM 384 (391)
T TIGR01364 314 NPVDKRARSLMNVVFTLPNEK---GDEELEKEFLKEA-----EERGLVGLKGHRSVG-GMRASIYNALPLEGVQALVDFM 384 (391)
T ss_pred CCCCHHHCCCCCEEEECCCCC---CCHHHHHHHHHHH-----HHCCCHHCCCCCEEC-CEEEEHHCCCCHHHHHHHHHHH
T ss_conf 643754267464221378877---8555548999999-----970500127630331-2521011176889999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 376 RW 377 (391)
Q Consensus 376 e~ 377 (391)
++
T Consensus 385 ~~ 386 (391)
T TIGR01364 385 KE 386 (391)
T ss_pred HH
T ss_conf 99
No 3
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=0 Score=548.09 Aligned_cols=334 Identities=24% Similarity=0.348 Sum_probs=291.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 8868887768968999986321----------036532898899999999999999968899857999748734899987
Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391)
Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391)
.||++||+.+|++ |++.++++ +||+||||++|.+++++++++||+||++|++|+|+|+|||||+||+++
T Consensus 1 ~NF~aGPa~lp~~-Vl~~~~~e~~~~~~~G~sile~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y~Vlfl~GGat~qf~~i 79 (355)
T cd00611 1 INFSAGPAALPEE-VLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAV 79 (355)
T ss_pred CCCCCCCCCCCHH-HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
T ss_conf 9678887658999-999999997542688601551266887899999999999999848999808999578449999999
Q ss_pred HHHCCCCCC-EEEEEECCHHHHHHHHHHHCCCCCEEEE---ECCCCCCCCHHHCCCCCC---EEEEEEECCCCEEECCEE
Q ss_conf 532057897-0799707368888876532387630674---057776578676785565---799742024202203203
Q gi|254780153|r 84 LWSLLGYRG-VDVLAWESFGLGWMSDIRQLSLQDVREF---TAPYGSLPDFSKVDFDRD---VVFVWNGTTSGVCVPDVG 156 (391)
Q Consensus 84 ~~nl~~~~~-~~~~~~g~~~~r~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~---v~~~h~ETstGv~~~~~~ 156 (391)
++||+.++. ..++++|.|++++++++++.+....... ..+++..++.+.|+...+ +++|+|||++|++.+..
T Consensus 80 p~Nll~~~~~a~y~~tG~ws~ka~~eA~~~~~~~~i~~~~~~~~~~~iP~~~~~~~~~~~~yvh~t~NETi~Gv~~~~~- 158 (355)
T cd00611 80 PLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDEV- 158 (355)
T ss_pred HHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEECCCC-
T ss_conf 9851478870589973726899999998746774103665667877689934327888777799932577534344656-
Q ss_pred EECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 50256861488640110110254556857999700120017665154456778887654114457783123200112321
Q gi|254780153|r 157 FIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 157 ~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
+...+.++|+||+|+++++|+|++++|++|+|+|||| ||+|+++|+++++++++.. ...|.+++|..+.+
T Consensus 159 --p~~~~~~lV~D~SS~~~s~~iD~~~~d~iYagaQKnl-GpaG~tvvIir~~ll~~~~-----~~~P~~l~y~~~~~-- 228 (355)
T cd00611 159 --PDTGGVPLVADMSSNILSRPIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKDLLGKAR-----KITPSMLNYKTHAD-- 228 (355)
T ss_pred --CCCCCCCEEEEECCHHCCCCCCHHHCCEEEEECCCCC-CCCCEEEEEECHHHHHHCC-----CCCCCHHHHHHHHH--
T ss_conf --6778962787502054086767789218998710015-6665089998499971024-----46973200999985--
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
++|++|||||+.||.+.++++|++++||++++.+|++++++.||+|+|++..++.++.+++.||++|++|++.++.
T Consensus 229 ----~~s~~NTPp~f~iy~~~lv~~Wl~~~GGl~~~~~~n~~kA~~LY~~iD~s~~~y~~~v~~~~RS~mnv~f~~~~~~ 304 (355)
T cd00611 229 ----NNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEE 304 (355)
T ss_pred ----HCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCCEEEEEECCHH
T ss_conf ----2555579627999999999999887689999999999999999999985888011789823358775899858878
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 011373456788899999888628287266556767505686158889999999999999
Q gi|254780153|r 317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
. +..|++. . +++++++++|||++| |+|||+|+++++++|++|+++++
T Consensus 305 l-------~~~Fl~~----a-~~~Gl~~lkGhRsvG-g~RaS~ynA~~~e~V~aL~~fm~ 351 (355)
T cd00611 305 L-------EKEFLKE----A-EAAGMIGLKGHRSVG-GIRASIYNALSLEGVQALADFMK 351 (355)
T ss_pred H-------HHHHHHH----H-HHCCCCCCCCCCCCC-CEEEEEECCCCHHHHHHHHHHHH
T ss_conf 8-------9999999----9-987882556875223-52788508989999999999999
No 4
>PRK05355 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=535.64 Aligned_cols=340 Identities=22% Similarity=0.330 Sum_probs=292.9
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
Q ss_conf 9988868887768968999986321----------036532898899999999999999968899857999748734899
Q gi|254780153|r 11 PKRPFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAV 80 (391)
Q Consensus 11 p~~~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ 80 (391)
.+--||+|||+.+|++ |++.++++ +||+||||++|.+++++++++||+||++|++|+|+|+|||||+||
T Consensus 2 ~r~~NF~aGPa~LP~~-Vl~~~~~e~~~~~g~G~silEiSHRs~~f~~i~~~a~~~lr~Ll~iPd~YeVlflqGGat~qF 80 (360)
T PRK05355 2 MRVYNFSAGPAMLPEE-VLEQAQQELLDWNGSGMSVMEISHRSKEFIAVAEEAEADLRELLNIPDNYKVLFLQGGASLQF 80 (360)
T ss_pred CCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 9851178885438999-999999998602588860575455888899999999999999848999818999578458999
Q ss_pred HHHHHHCCCCCC-EEEEEECCHHHHHHHHHHHCCCCCEEEEECC--CCCCCCHHHCCCCCC---EEEEEEECCCCEEECC
Q ss_conf 987532057897-0799707368888876532387630674057--776578676785565---7997420242022032
Q gi|254780153|r 81 EMALWSLLGYRG-VDVLAWESFGLGWMSDIRQLSLQDVREFTAP--YGSLPDFSKVDFDRD---VVFVWNGTTSGVCVPD 154 (391)
Q Consensus 81 ea~~~nl~~~~~-~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~---v~~~h~ETstGv~~~~ 154 (391)
+++++||+.+++ ..++++|.|++++++++.+++...+.....+ +..+++.++|+..++ +++|+|||++|++.+.
T Consensus 81 ~~ip~Nll~~~~~a~y~~tG~Ws~KA~~EA~~~~~~~v~~~~~~~~~~~iP~~~~~~~~~~~~Y~h~t~NETi~Gv~~~~ 160 (360)
T PRK05355 81 AMVPLNLLGKGGKADYVVTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTPNETIDGTEIHE 160 (360)
T ss_pred HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCEEECC
T ss_conf 99987467889802389538889999997376168732013466777558986652779775679971477501046101
Q ss_pred EEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 03502568614886401101102545568579997001200176651544567788876541144577831232001123
Q gi|254780153|r 155 VGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 155 ~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
. +...+.++|+||+|+++++|+|++++|++|+|+|||| ||+|+++|+++++++++. ....|.+++|..+.+
T Consensus 161 ~---P~~~~~pLV~DmSS~~lsrpiD~~~~d~iYagaQKNl-GpaGvtvvIvr~~ll~~~-----~~~iP~~l~y~~~~~ 231 (360)
T PRK05355 161 L---PDTGDVPLVADMSSDILSRPIDVSKFGLIYAGAQKNI-GPAGLTIVIVREDLLGRA-----LPNIPSMLDYKTHAD 231 (360)
T ss_pred C---CCCCCCCEEEECCCCCCCCCCCHHHCCEEEEECCCCC-CCCCCEEEEEEHHHHHCC-----CCCCCCHHHHHHHHH
T ss_conf 3---6668984799734543477677789157998743357-876518999759996223-----668960530999986
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
+++++|||||+.||.+.++|+|++++||++++.+|++++++.||+++|+++++.+.+ ++++||++|++|++.+
T Consensus 232 ------~~Sl~NTPp~f~iy~~~lvl~Wl~~~GGl~~~~~~n~~KA~lLY~~iD~s~fy~~~v-~~~~RS~mNV~F~~~~ 304 (360)
T PRK05355 232 ------NDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAIEKRNQEKAALLYDAIDSSDFYRNPV-APENRSRMNVPFTLAD 304 (360)
T ss_pred ------HCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CHHHCCCCEEEEECCC
T ss_conf ------367666884289999999999998617699999999998999999986078635889-8565686544787187
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 3101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
+.+ +..|++. ++++++++++|||++| |+|+|+|+++++++|++|++.++ -|++
T Consensus 305 ~~l-------~~~Fl~~-----a~~~Gl~~LkGhRsvG-G~RaSlYNa~~~e~V~~L~~fm~-~F~~ 357 (360)
T PRK05355 305 EEL-------DKKFLAE-----AEAAGLVGLKGHRSVG-GMRASIYNAMPLEGVQALVDFMK-EFEK 357 (360)
T ss_pred HHH-------HHHHHHH-----HHHCCCCCCCCCCCCC-CEEEEECCCCCHHHHHHHHHHHH-HHHH
T ss_conf 778-------9999999-----9987986666876538-52788017999999999999999-9999
No 5
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=0 Score=533.64 Aligned_cols=343 Identities=19% Similarity=0.151 Sum_probs=290.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf 88688877689689999863210365328988999999999999999688998579997487348999875320578970
Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV 93 (391)
Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~ 93 (391)
..|+|||++++|+ |+++|..++ ||||++|.+++++++++||++|++|++|++++++||||++||+++.|+++++++
T Consensus 1 lL~~PGP~~v~~~-V~~am~~~~---~HRs~~F~~i~~~~~~~L~~l~~~~~~~~v~~l~gsGt~a~Ea~~~nl~~~g~~ 76 (355)
T TIGR03301 1 ILLTPGPLSTSAT-VRDAMLVDW---CHWDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGK 76 (355)
T ss_pred CCCCCCCCCCCHH-HHHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCE
T ss_conf 9765899999999-999718777---889889999999999989999589998479999165599999999852367987
Q ss_pred E-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--ECCCCC
Q ss_conf 7-99707368888876532387630674057776578676785-------5657997420242022032035--025686
Q gi|254780153|r 94 D-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IPESRE 163 (391)
Q Consensus 94 ~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~~~~~ 163 (391)
+ ++++|.||+||++++.+++ .+++.+..+||+.+++++++. .+.+++||||||||+.+|+.++ ++++++
T Consensus 77 vlv~~~G~fg~r~~~~a~~~g-~~~~~~~~~~g~~~~~~~v~~~l~~~~~~~~v~~~h~ETstGv~~~~~~i~~~~~~~~ 155 (355)
T TIGR03301 77 LLVLINGAYGERLAKICEYLG-IPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHG 155 (355)
T ss_pred EEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCC
T ss_conf 999954889999999999829-9669973688778998999999725778548999501267874175376656650479
Q ss_pred CEEEEEECCHHHHCCCCC--CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCC
Q ss_conf 148864011011025455--685799970012001766515445677888765411445778312320011232103347
Q gi|254780153|r 164 GLVICDATSAVFARHIDF--NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFC 241 (391)
Q Consensus 164 ~llivD~vSs~g~~p~d~--~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (391)
+++|||++||+|++|+|+ |++|+++++|||||++|||++++++|++++++.... ....|+++....++ ....
T Consensus 156 ~llvVDavSs~g~~p~d~~~~gvD~~~~~sQK~l~~ppGl~~v~~~~~~~~~~~~~----~~~~y~dl~~~~~~--~~~~ 229 (355)
T TIGR03301 156 AVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGN----ARSLYLDLYDQWAY--MEKT 229 (355)
T ss_pred CEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHCCCC----CCCCCCCHHHHHHH--HHCC
T ss_conf 64999745643568642011565899953655567888757888669999751379----87666358999988--6347
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 86446664488999999998620103189999999977999999987479716766882003653178982473101137
Q gi|254780153|r 242 GETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLD 321 (391)
Q Consensus 242 ~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~ 321 (391)
++++|||||++||+++++|+||+++||++++++||+++++.+|+++++++ +.+++ ++++||+++++++++++... +
T Consensus 230 g~~~~Tppv~~i~al~~al~~i~~eGGl~~~~~r~~~~a~~l~~~l~~lg-l~~~~-~~~~~s~~vt~~~~p~~~~~--d 305 (355)
T TIGR03301 230 GKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLL-PERWQSPIIVSFLYPDDPDF--D 305 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCCEEEEECCCCCCC--C
T ss_conf 98787885499999999999999723799999999999999999999869-94358-91564986699988998885--7
Q ss_pred HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 3456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 322 INSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 322 ~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.+.+.+.+.++|+.+ .+||+..+++|||||||+++++||++|+++||.++
T Consensus 306 -------~~~~~~~l~~~g~~i-~~G~~~~~~~fRig~mG~~~~~dv~~ll~~le~~L 355 (355)
T TIGR03301 306 -------FDDFYQELKERGFVI-YPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred -------HHHHHHHHHHCCEEE-ECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf -------999999999779078-57876779989898189999999999999999769
No 6
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=534.11 Aligned_cols=343 Identities=22% Similarity=0.318 Sum_probs=294.8
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf 6899888688877689689999863210----------365328988999999999999999688998579997487348
Q gi|254780153|r 9 RKPKRPFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391)
Q Consensus 9 ~~p~~~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391)
|+++..||++||+.+ |..|++.+++.+ ||+||||++|.+++++++++||+||++|++|+|+|+|||||+
T Consensus 1 m~~~~~NF~aGPa~L-P~~Vl~~~~~e~~~~~~~G~simE~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y~VlflqGGAt~ 79 (364)
T PRK12462 1 MHRNQLNFSGGPGAL-PDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAQADLRDLLGIPDEYGVVFLQGGSSL 79 (364)
T ss_pred CCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHH
T ss_conf 996762158886448-9999999999986056897027850668888999999999999998589998279995681789
Q ss_pred HHHHHHHHCCCCCCE--EEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCCC---CCEEEEEEECCCCEE
Q ss_conf 999875320578970--799707368888876532387630674--0577765786767855---657997420242022
Q gi|254780153|r 79 AVEMALWSLLGYRGV--DVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDFD---RDVVFVWNGTTSGVC 151 (391)
Q Consensus 79 ~~ea~~~nl~~~~~~--~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~---~~v~~~h~ETstGv~ 151 (391)
||+++++||+.++.. .++++|.|+.++++++.+.+...+... ...++..|+.++|+.. ..+++|+|||++|++
T Consensus 80 qf~~ip~Nll~~~~~~a~y~~tG~WS~kA~~EA~k~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~y~h~t~NeTi~Gvq 159 (364)
T PRK12462 80 QFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAALDWDARAPFRHYVSNETVEGLQ 159 (364)
T ss_pred HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCEE
T ss_conf 99999863756788523499627868999999997589148623566888646774322778884469862577423324
Q ss_pred ECCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 03203502568614886401101102545568579997001200176651544567788876541144577831232001
Q gi|254780153|r 152 VPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 152 ~~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
.+.. +...+.++|+||+|+++++|+|++++|++|+|+|||| ||+|+++++++++++++... ..|.+++|..
T Consensus 160 ~~~~---~~~~~~plV~DmSS~~lsrpiD~s~~~viYagaQKN~-G~aG~tvvIir~dll~~~~~-----~iP~~ldy~~ 230 (364)
T PRK12462 160 FPDA---ADLPDSPLIADMSSDFMSRPFDVRAYGMVYAHAQKNL-GPAGVTVAIIRRALLERVPD-----TLPPMLDFRT 230 (364)
T ss_pred ECCC---CCCCCCEEEEECCHHHHCCCCCHHHEEEEEEECCCCC-CCCCEEEEEECHHHHCCCCC-----CCCCCCCHHH
T ss_conf 1567---8999973887346065167656779038998621125-66661899987999616220-----3864021888
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 12321033478644666448899999999862010-31899999999779999999874797167668820036531789
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM-GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~-gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391)
+.+ ++|++|||||+.||.+.++++|++++ ||++++.+|++++++.||+++|++..++..+.+++.||++|++|
T Consensus 231 ~~~------~~S~yNTPp~f~Iy~~~lvl~Wl~~~~GGl~~~~~~n~~Ka~~LY~~iD~s~~fy~~~v~~~~RS~mNv~F 304 (364)
T PRK12462 231 HVE------HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAF 304 (364)
T ss_pred HHH------HCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEE
T ss_conf 986------08878894269999999999999862135589999999999999999971878766889846588588468
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 82473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
+++++.+ +..+++. ++++++++++|||++| |||||+|++++.++|++|++.++ -|++
T Consensus 305 ~~~~~~l-------~~~Fl~~-----a~~~Gl~~lkGhRsvG-G~RaSlYNa~~~e~V~~L~~fM~-~F~~ 361 (364)
T PRK12462 305 RFRQPRL-------DTLFKEQ-----STEAGFCGLSGHRSIG-GIRASLYNAVSEQAVSRLCAFLK-DFAI 361 (364)
T ss_pred ECCCHHH-------HHHHHHH-----HHHCCCCCCCCCCCCC-CCEEECCCCCCHHHHHHHHHHHH-HHHH
T ss_conf 1497667-------8999999-----9987986651887114-52677117999999999999999-9998
No 7
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=533.40 Aligned_cols=347 Identities=34% Similarity=0.516 Sum_probs=303.4
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf 689988868887768968999986321----------0365328988999999999999999688998579997487348
Q gi|254780153|r 9 RKPKRPFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391)
Q Consensus 9 ~~p~~~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391)
.+|+.+|||+||+.+||+ ||+.++.. ++|+||||++|.++++++++++|+||++|+||+|+|+|||+|+
T Consensus 2 ~~~~~~nFsaGPa~lp~~-vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~ 80 (365)
T COG1932 2 SMPRVYNFSAGPAALPPE-VLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATG 80 (365)
T ss_pred CCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
T ss_conf 987788878885248989-9999999886341678630122133388899999999989999579987469997485378
Q ss_pred HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCC----CCEEEEECCCCCCCCHHHCCCCC-C--EEEEEEECCCCEE
Q ss_conf 999875320578970799707368888876532387----63067405777657867678556-5--7997420242022
Q gi|254780153|r 79 AVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSL----QDVREFTAPYGSLPDFSKVDFDR-D--VVFVWNGTTSGVC 151 (391)
Q Consensus 79 ~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~-~--v~~~h~ETstGv~ 151 (391)
||+|+++||++++...+++.|.|+....+++.+++. .++...+.++|.+++++.|+..+ + |++|||||++||.
T Consensus 81 qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~ayv~~~~NeTi~Gv~ 160 (365)
T COG1932 81 QFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWDFSDNDAYVHFCWNETISGVE 160 (365)
T ss_pred HHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEE
T ss_conf 99988886421357505766214576899999864565312320002676679982214667775579993488612157
Q ss_pred ECCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 03203502568614886401101102545568579997001200176651544567788876541144577831232001
Q gi|254780153|r 152 VPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 152 ~~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
.+..+.+..+ .++|+|++|+++++|+|+.++|++|+|+|||| ||.|++++|+||++++|.+..+ .|..|+|..
T Consensus 161 v~~~p~~~~~--~~~v~D~SS~ilsr~iDvsk~dviyagaQKnl-GpaGltvvIvr~~~l~r~~~~~----~P~if~y~~ 233 (365)
T COG1932 161 VPELPDIGSD--GLLVADASSAILSRPIDVSKYDVIYAGAQKNL-GPAGLTVVIVRPDLLERAESYT----LPSIFDYLT 233 (365)
T ss_pred CCCCCCCCCC--CEEEEECCCHHHCCCCCHHHCCEEEEEHHHCC-CCCCEEEEEECHHHHHCCCCCC----CCHHHHCHH
T ss_conf 1688988877--60899656277557777567135887621125-7655399998689970113568----961764312
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 12321033478644666448899999999862010318999999997799999998747971676688200365317898
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK 311 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~ 311 (391)
+ ..++||+|||||+.+|.+..+++|++++||++++.+|++++++.||+++|+++++.+.+.+ +.||+||+||.
T Consensus 234 ~------~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~-~~RS~mnV~f~ 306 (365)
T COG1932 234 H------ADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK-ANRSRMNVTFT 306 (365)
T ss_pred H------HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH-HHCCCEEEEEE
T ss_conf 1------1048842784899999999999999974999999998899899999998727753344552-12153268987
Q ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 247310113734567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r 312 IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 312 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
+.++. ..+.+++...++|.+. ++|||..| |+|||+|++++.+||++|+++++|+++..|
T Consensus 307 ~~~~~-----------ld~~fv~eae~~gl~~-lkGhr~vg-GmRasiynA~~~e~veaL~~fm~~f~~~~~ 365 (365)
T COG1932 307 LVDAE-----------LDKGFVAEAEAAGLIY-LKGHRSVG-GLRASIYNAVPLEDVEALTDFMDWFEETYK 365 (365)
T ss_pred CCCHH-----------HHHHHHHHHHHCCCCE-ECCCCCCC-CEEEEEECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 27377-----------7799999999737741-02664778-616654357788999999999999998609
No 8
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=522.39 Aligned_cols=353 Identities=23% Similarity=0.214 Sum_probs=302.6
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf 88868887768968999986321036532898899999999999999968899857999748734899987532057897
Q gi|254780153|r 13 RPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391)
Q Consensus 13 ~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391)
+..|+|||++++|+ |+++|..++++ |||++|..++++++++|+++|++. ++.+++++||||++|||++.|++++|+
T Consensus 6 ~~Ll~PGP~~v~~~-V~~am~~~~~~--h~s~~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgd 81 (383)
T COG0075 6 RLLLTPGPVPVPPR-VLLAMARPMVG--HRSPDFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGD 81 (383)
T ss_pred CEEEECCCCCCCHH-HHHHHCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf 52433799888999-99974577777--779889999999999999996688-874799768837999999986058998
Q ss_pred EE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--ECCCC
Q ss_conf 07-99707368888876532387630674057776578676785-------5657997420242022032035--02568
Q gi|254780153|r 93 VD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IPESR 162 (391)
Q Consensus 93 ~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~~~~ 162 (391)
++ +++||.||+||++++.+++ .+++.++.+||+.+++++++. .+.|++||||||||+.+|+.++ +++.+
T Consensus 82 kVLv~~nG~FG~R~~~ia~~~g-~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~ 160 (383)
T COG0075 82 KVLVVVNGKFGERFAEIAERYG-AEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH 160 (383)
T ss_pred EEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHC
T ss_conf 6999827807779999999829-966998478888799999999985289950899981157520137699999999972
Q ss_pred CCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC
Q ss_conf 614886401101102545--568579997001200176651544567788876541144577831232001123210334
Q gi|254780153|r 163 EGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240 (391)
Q Consensus 163 ~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
++++|||+|||+|+.|++ .|++|++++||||||++|||++++.+|++|+++.+..+.+ ..|||+..+.+++...
T Consensus 161 g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~~~~~~~~~~---~~ylDL~~~~~~~~~~- 236 (383)
T COG0075 161 GALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP---SFYLDLKKWLKYMEKK- 236 (383)
T ss_pred CCEEEEEECCCCCCCCCCHHHCCCCEEEECCCHHCCCCCCCCEEEECHHHHHHHHCCCCC---CEEECHHHHHHHHHHC-
T ss_conf 988999823457881254444284589976720115898614367779999998558887---6022199999988536-
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 78644666448899999999862010318999999997799999998747971676688200365317898247310113
Q gi|254780153|r 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL 320 (391)
Q Consensus 241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~ 320 (391)
++||+||||+.+|+|+++|+.|++| |++++++||+++++.+++++++++ +..++ +++++|++++++++|++...
T Consensus 237 -~~~p~Tppv~~i~aL~~al~~i~~E-Gle~r~~RH~~~~~a~r~~~~alG-l~~~~-~~~~~s~tvta~~~P~g~~~-- 310 (383)
T COG0075 237 -GSTPYTPPVNLIYALREALDLILEE-GLEARIARHRRLAEALRAGLEALG-LELFA-DPERRSPTVTAIKVPEGVDD-- 310 (383)
T ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CCCCCCCCEEEEECCCCCCC--
T ss_conf -8988898778999999999999986-579999999999999999999769-84236-86557885489978988772--
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 73456788899999888628287266556767505686158889999999999999999999998775
Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLR 388 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~ 388 (391)
.. .....+.+.|+.+.-+....+||.|||||||.+++.|+..++.+||.++.+....+..
T Consensus 311 ----~~----~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~~~ 370 (383)
T COG0075 311 ----KK----VRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKVEA 370 (383)
T ss_pred ----HH----HHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf ----99----9999998479996456545576189983575678899999999999999974975436
No 9
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=0 Score=518.79 Aligned_cols=352 Identities=19% Similarity=0.138 Sum_probs=297.7
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 89988868887768968999986321036532898899999999999999968899857999748734899987532057
Q gi|254780153|r 10 KPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391)
Q Consensus 10 ~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391)
++....|+|||++++|+ |+++|.+++ .||+++|.+++++++++|+++|+++++|.+++++||||++|||++.|+++
T Consensus 3 ~~~~lL~~PGPt~v~~~-V~~Am~~~~---~~~~~eF~~l~~~~~~~L~~l~~~~~~~~~v~~~gSGT~amEaai~nl~~ 78 (368)
T PRK13479 3 ENDPLLLTPGPLTTSRT-TREAMLRDW---GSWDDDFNAITASVRADLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP 78 (368)
T ss_pred CCCEEEECCCCCCCCHH-HHHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf 89805745899999999-999747577---89877899999999999999957888707999716867999999961547
Q ss_pred CCCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--EC
Q ss_conf 89707-99707368888876532387630674057776578676785-------5657997420242022032035--02
Q gi|254780153|r 90 YRGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IP 159 (391)
Q Consensus 90 ~~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~ 159 (391)
+|+++ ++++|.||+||++.+++++ .+++.++.+||+.+++++++. .+.|++||||||||+.+|+.++ ++
T Consensus 79 ~gdkvLv~~~G~FG~R~~~ia~~~g-~~v~~l~~~~g~~~~~~~ve~~L~~~~~~~~v~~vH~ETSTGvln~l~~i~~~~ 157 (368)
T PRK13479 79 RDGKVLVPDNGAYGARIAKIAEYLG-IAHVVLDTGEDEPPDAAAVEAALAADPRITHVALVHCETTTGILNPLDEIAAVV 157 (368)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH
T ss_conf 9997999817927999999999819-975998789999889999999997499967899985067720316799999999
Q ss_pred CCCCCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf 568614886401101102545--568579997001200176651544567788876541144577831232001123210
Q gi|254780153|r 160 ESREGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME 237 (391)
Q Consensus 160 ~~~~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
+++++++|||+|||+|+.|++ .|++|++++||||||++|||++++++|++++++.+.. .+ ..||++....+ .
T Consensus 158 ~~~~~lliVDaVSs~G~~~~~~d~wgiD~~~tgSQK~l~~pPGLs~v~~s~~a~~~~~~~-~~---~~yldl~~~~~--~ 231 (368)
T PRK13479 158 KRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSALEACKGN-SR---SLALDLYDQWA--Y 231 (368)
T ss_pred HHCCCEEEEECCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCC-CC---CCCCCHHHHHH--H
T ss_conf 854986999702001572110244535699953765145799710122089999987425-88---76636899999--9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 33478644666448899999999862010318999999997799999998747971676688200365317898247310
Q gi|254780153|r 238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317 (391)
Q Consensus 238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~ 317 (391)
....++|++||||+++|+|+++|++|++|||++++++||++.++.+++++++++ +++++ +++++|++++++..|+...
T Consensus 232 ~~~~~~~~~Tp~v~li~aL~eaL~~i~~EGgl~~r~~r~~~~~~~~~~~~~~lG-l~~~~-~~~~~s~tvtav~~P~~~~ 309 (368)
T PRK13479 232 MEKTGQWRFTPPTHVVAAFYQALLQLEEEGGVPARGARYARNCRTLVAGMRALG-FEPLL-DDEIQSPIIVTFHAPADPA 309 (368)
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCCEEEEECCCCCC
T ss_conf 864499886882899999999999999831889999999999999999999738-76578-9456598679997678856
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1137345678889999988862828726655676750568615888999999999999999999999
Q gi|254780153|r 318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
. ..+.+...+.++|..+..|+ ...++.|||||||.++++||.+++.+||.+++++.+
T Consensus 310 ~---------d~~~~~~~l~~~g~~i~~G~-~~~~~~fRIGhMG~~~~~di~~~l~ale~~L~~~Gi 366 (368)
T PRK13479 310 Y---------DFKEFYERLKEQGFVIYPGK-LTQVDTFRIGCIGAVDAADIRRLVAAIAEALYWMGV 366 (368)
T ss_pred H---------HHHHHHHHHHHCCCEEECCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 3---------59999999997793896885-577897988779999999999999999999998599
No 10
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=0 Score=496.83 Aligned_cols=344 Identities=22% Similarity=0.211 Sum_probs=292.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf 88688877689689999863210365328988999999999999999688998579997487348999875320578970
Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV 93 (391)
Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~ 93 (391)
..|+|||++++|+ |+++|..+++ +||+++|.+++++++++|+++|+++ +|.+++++||||++||+++.|+++++++
T Consensus 1 lL~tPGP~~~~~~-V~~Am~~~~~--~hR~~~F~~~~~~~~~~L~~~~~~~-~~~~v~~~gsgt~a~ea~~~n~~~~~~k 76 (356)
T cd06451 1 LLLIPGPSNVPPR-VLKAMNRPML--GHRSPEFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLLEPGDK 76 (356)
T ss_pred CCCCCCCCCCCHH-HHHHHCCCCC--CCCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCHHHHHHHHHHHCCCCCCC
T ss_conf 9775899988899-9998579998--8678899999999999999995899-9848999577089999999852688881
Q ss_pred E-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC------CCCEEEEEEECCCCEEECCEEE--ECCCCCC
Q ss_conf 7-99707368888876532387630674057776578676785------5657997420242022032035--0256861
Q gi|254780153|r 94 D-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF------DRDVVFVWNGTTSGVCVPDVGF--IPESREG 164 (391)
Q Consensus 94 ~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~v~~~h~ETstGv~~~~~~~--~~~~~~~ 164 (391)
+ ++++|.||.||++++++++ .+++.++.+||+.+++++++. .+.|++||||||||+.+|+.++ +++++++
T Consensus 77 vlv~~~G~fg~r~~~~a~~~g-~~~~~i~~~~~~~~~~~~v~~~l~~~~~~~v~~~h~etstG~~~~l~~i~~~~~~~~~ 155 (356)
T cd06451 77 VLVGVNGVFGDRWADMAERYG-ADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDA 155 (356)
T ss_pred EEEEEEEECCCCHHHHHHHCC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCE
T ss_conf 478853040541676441159-7239986899997898999988633896589996653651014775889998741572
Q ss_pred EEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC
Q ss_conf 488640110110254556--857999700120017665154456778887654114457783123200112321033478
Q gi|254780153|r 165 LVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG 242 (391)
Q Consensus 165 llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (391)
+++||++||+|+.|+|++ ++|++++|+||||++|||++++++|++++++.+.... ..+.|+++..+.++ ...++
T Consensus 156 ~~~vDavss~g~~~id~~~~giD~~~~ssqK~l~~ppGl~~~~vs~~a~~~~~~~~~--~~~~y~dl~~~~~~--~~~~~ 231 (356)
T cd06451 156 LLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTK--PKGFYFDLLLLLKY--WGEGY 231 (356)
T ss_pred EEEEECCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCC--CCCCCCCHHHHHHH--HHCCC
T ss_conf 799725311055650256666059997688644589966899988999999860389--98777798999987--61489
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
Q ss_conf 64466644889999999986201031899999999779999999874797167668820036531789824731011373
Q gi|254780153|r 243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI 322 (391)
Q Consensus 243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~ 322 (391)
++++|||++.+++++++|+|++++ |++++++||+++++.+++++++. ++++++ +++.+|++++++++++...
T Consensus 232 ~~~~Tp~~~~i~al~~AL~~i~~~-G~~~~~~r~~~l~~~l~~~l~~l-Gl~~~~-~~~~~S~~vt~~~~p~g~~----- 303 (356)
T cd06451 232 SYPHTPPVNLLYALREALDLILEE-GLENRWARHRRLAKALREGLEAL-GLKLLA-KPELRSPTVTAVLVPEGVD----- 303 (356)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHC-CCCCCC-CHHHCCCEEEEEECCCCCC-----
T ss_conf 878898806889999999999860-65899999999999999999975-996568-9365498279997999999-----
Q ss_pred HHHHHHHHHHHHHH-HHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 45678889999988-86282872665567675056861588899999999999999999
Q gi|254780153|r 323 NSQKSFCKSMLSFL-EKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 323 ~~~~~~~~~~~~~l-~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.+.+.+.+ .+.|+.+..+.+..+++.|||||||+++.+||++++++||.+++
T Consensus 304 ------~~~~~~~l~~~~~i~i~~g~g~~~~~~fRIg~mG~~~~~di~~~l~al~~~Lk 356 (356)
T cd06451 304 ------GDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ------HHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf ------99999999997899997886656895898618989999999999999999859
No 11
>KOG2862 consensus
Probab=100.00 E-value=0 Score=447.53 Aligned_cols=358 Identities=18% Similarity=0.170 Sum_probs=298.0
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 64689988868887768968999986321036532898899999999999999968899857999748734899987532
Q gi|254780153|r 7 PTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n 86 (391)
|.-+|.+..|+|||+++ |+.|+++|..+++| |+||+|.+||+++++++|++|++-+++. +.++|+||++||+++.|
T Consensus 12 ~m~~p~~~L~gPGPsnl-~~~V~~A~~~~~lg--h~sPe~~qIm~~v~egikyVFkT~n~~t-f~isgsGh~g~E~al~N 87 (385)
T KOG2862 12 PMYVPVRTLLGPGPSNL-SGRVQEAMSRPSLG--HMSPEFVQIMDEVLEGIKYVFKTANAQT-FVISGSGHSGWEAALVN 87 (385)
T ss_pred CCCCCCCEEECCCCCCC-CHHHHHHHCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEEECCCCCHHHHHHHH
T ss_conf 44578301555787678-77899850677656--6787899999999987899840478962-89836984168998875
Q ss_pred CCCCCCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC------CCCEEEEEEECCCCEEECCEE---
Q ss_conf 05789707-99707368888876532387630674057776578676785------565799742024202203203---
Q gi|254780153|r 87 LLGYRGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF------DRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 87 l~~~~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~v~~~h~ETstGv~~~~~~--- 156 (391)
+++|||.+ ++.+|.||+||+. ++++.+.+|++++.++|+...++++.. .+.+++||+||||||.+|+.+
T Consensus 88 ~lePgd~vLv~~~G~wg~ra~D-~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g 166 (385)
T KOG2862 88 LLEPGDNVLVVSTGTWGQRAAD-CARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISG 166 (385)
T ss_pred HCCCCCEEEEEEECHHHHHHHH-HHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH
T ss_conf 2578974999972337778899-998608655587158556754999999987158745999834764111155788887
Q ss_pred EECCCCCCEEEEEECCHHHHCCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 50256861488640110110254--5568579997001200176651544567788876541144577831232001123
Q gi|254780153|r 157 FIPESREGLVICDATSAVFARHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 157 ~~~~~~~~llivD~vSs~g~~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
.+|++++++++||+++|+|+.|+ |.|++|+.|++|||+|++|||++++++|++|+++....+. ++...||++..+.+
T Consensus 167 ~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~-~~~~~yFd~~~~~~ 245 (385)
T KOG2862 167 ELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKT-KPVSFYFDILRLGN 245 (385)
T ss_pred HHHHCCCEEEEEECHHHCCCCCCEEHHHCCCEEEECCHHHCCCCCCCCEEECCHHHHHHHHHCCC-CCEEEEEEHHHHCC
T ss_conf 87406781899720221478641121106507884243430799985603238889999861457-75489986776103
Q ss_pred HHC-CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 210-3347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r 235 VME-GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391)
Q Consensus 235 ~~~-~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391)
++- +.....+++|||+.++|.|+++|..|.+| |++++++||+++++.++..+++++ +.+|+.+++.|+++++++.++
T Consensus 246 ~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~ee-GL~~~~~rH~e~s~~l~~~l~~~G-Lq~fv~~e~~rlptvttv~vp 323 (385)
T KOG2862 246 FWGCDGEPRAYHHTPPVQLLYSLRAALALIAEE-GLENSWRRHREMSKWLKLSLEALG-LQLFVVDEELRLPTVTTVKVP 323 (385)
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-CCCEECCHHHCCCCCEEEECC
T ss_conf 205588635111688489999999999999998-789999999999999999999848-610213764526750256547
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 73101137345678889999988862-8287266556767505686158-8899999999999999999999
Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLGLRVWVGV-TVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~~RIg~~g-~i~~~dv~~L~~aLe~~~~~~k 383 (391)
..... ++++.+.-.. ++.++.+....+||.||||++| .-+.+.|+..++.|.-+.+..|
T Consensus 324 ~gvDw-----------~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862 324 YGVDW-----------KDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred CCCCH-----------HHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 77887-----------99999998716778614667775628999875115772899999999999986416
No 12
>KOG2790 consensus
Probab=100.00 E-value=0 Score=447.69 Aligned_cols=342 Identities=21% Similarity=0.308 Sum_probs=293.5
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
Q ss_conf 9888688877689689999863210----------365328988999999999999999688998579997487348999
Q gi|254780153|r 12 KRPFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVE 81 (391)
Q Consensus 12 ~~~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~e 81 (391)
+-.||+|||+.+ |+.|+..++..+ +|+||||++|..|++++.+++|+|+++|++|+|+|||||||+||.
T Consensus 7 ~vvnFaaGPAkl-p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFa 85 (370)
T KOG2790 7 RVVNFAAGPAKL-PESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFA 85 (370)
T ss_pred CEECCCCCCCCC-CHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf 303057883007-8899999998752667764127774145255788888889999999659975069999578746310
Q ss_pred HHHHHCCC--CC-CEEEEEECCHHHHHHHHHHHCCCCCEEE-EE--CCCCCCCCHHHCCCC---CCEEEEEEECCCCEEE
Q ss_conf 87532057--89-7079970736888887653238763067-40--577765786767855---6579974202420220
Q gi|254780153|r 82 MALWSLLG--YR-GVDVLAWESFGLGWMSDIRQLSLQDVRE-FT--APYGSLPDFSKVDFD---RDVVFVWNGTTSGVCV 152 (391)
Q Consensus 82 a~~~nl~~--~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~-~~--~~~g~~~~~~~~~~~---~~v~~~h~ETstGv~~ 152 (391)
|+++||.+ .| .+.++++|.|+.+.++++++++...... .. -.+|.+|+.+.|+.. ..|.+|-|||..||..
T Consensus 86 Av~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~da~yvyyCaNETVHGVEf 165 (370)
T KOG2790 86 AVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPDASYVYYCANETVHGVEF 165 (370)
T ss_pred HHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCEEECEEC
T ss_conf 10022210456884564886630076799987519800671365333467689835425388974799914851421113
Q ss_pred CCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHH
Q ss_conf 32035025686148864011011025455685799970012001766515445677888765411445778312320011
Q gi|254780153|r 153 PDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKG 232 (391)
Q Consensus 153 ~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~ 232 (391)
+..+ ....+++.+|+|++|.|.++|+|+.+++++|+|+|||+ ||+|+++++++++.+.+.... .|..++|..+
T Consensus 166 ~~~P-~~~~~~~vlVaDmSSnflSrpvDvsk~gvi~aGAQKN~-G~aG~Tvvivr~dllg~~~~~-----tP~v~dyk~~ 238 (370)
T KOG2790 166 DFIP-VNDPKGAVLVADMSSNFLSRPVDVSKFGVIFAGAQKNV-GPAGVTVVIVRKDLLGNALDI-----TPSVLDYKIM 238 (370)
T ss_pred CCCC-CCCCCCCEEEEECCCCHHCCCCCCHHCCEEEECCCCCC-CCCCCEEEEEEHHHHCCCCCC-----CCCCCCCHHH
T ss_conf 7888-77889965887633203138754012015886021255-655518999835642565558-----9620222310
Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 23210334786446664488999999998620103189999999977999999987479716766882003653178982
Q gi|254780153|r 233 GRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI 312 (391)
Q Consensus 233 ~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~ 312 (391)
..+++.+||||++.||+++.+++||++.||++++.+..+++++.+|+.||++.+|+..+.++..||.+|++|++
T Consensus 239 ------~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri 312 (370)
T KOG2790 239 ------DKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRI 312 (370)
T ss_pred ------CCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCEEE
T ss_conf ------26641015998503643366899999736699999887887789999886149868755673442101450684
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r 313 VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 313 ~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.+..+ +..|+++. .++ ..+.++|||++| |||.|.|++++.++++.|++.++ .|++
T Consensus 313 ~~d~L-------e~eFLkeA----~~~-~mv~LKGhRSVG-GiRASlYNAisv~~~q~L~~~m~-~F~k 367 (370)
T KOG2790 313 EKDEL-------EAEFLKEA----AKE-HMVQLKGHRSVG-GIRASLYNAISVEEVQKLAAFMK-EFQK 367 (370)
T ss_pred CCHHH-------HHHHHHHH----HHH-HCCCCCCCCCCC-CCHHHHHCCCCHHHHHHHHHHHH-HHHH
T ss_conf 63477-------89999999----984-032224654335-34356541322999999999999-9998
No 13
>TIGR01365 serC_2 phosphoserine aminotransferase; InterPro: IPR006271 These sequences represent a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.; GO: 0009058 biosynthetic process.
Probab=100.00 E-value=0 Score=408.71 Aligned_cols=372 Identities=63% Similarity=1.101 Sum_probs=358.2
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 89988868887768968999986321036532898899999999999999968899857999748734899987532057
Q gi|254780153|r 10 KPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391)
Q Consensus 10 ~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391)
.|.+|+|++||+..+|++..+.+....+|+|||+.--++-++++.+..|+++++|+||.+=++++|-||++|++++++++
T Consensus 1 ~P~~P~fssGPCak~PG~~~e~l~~~~lGrshr~~~Gk~~l~~ai~~tr~~l~~P~d~~~Giv~~sdtGa~em~lWs~lG 80 (379)
T TIGR01365 1 RPANPEFSSGPCAKRPGYSVEELKNAALGRSHRSKLGKEKLKEAIEKTREVLEVPADYLIGIVPASDTGAVEMALWSLLG 80 (379)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 98988866787667889777875200145046767659999999998789860874214666506662068988998745
Q ss_pred CCCEEEEEECCHHHHHHHHHH-HCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEE
Q ss_conf 897079970736888887653-2387630674057776578676785565799742024202203203502568614886
Q gi|254780153|r 90 YRGVDVLAWESFGLGWMSDIR-QLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVIC 168 (391)
Q Consensus 90 ~~~~~~~~~g~~~~r~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~lliv 168 (391)
...+.++++..|+..|..++. +....++..++.++|+.|++..++...++.|++|.|++||..|....++.++..+.++
T Consensus 81 ~r~v~~~~~esf~~~W~td~~kqlkl~dv~~l~a~yG~lPd~~k~d~~~d~vf~WnGttsGv~vPn~d~i~~~r~G~t~C 160 (379)
T TIGR01365 81 ARGVDLLAWESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDFKKDVVFTWNGTTSGVRVPNGDFIPADREGLTIC 160 (379)
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCEEEE
T ss_conf 78504788712345247777776300124432023467886201353447788874732530146643330126700420
Q ss_pred EECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH-----HHHHHCCCCCCC
Q ss_conf 401101102545568579997001200176651544567788876541144577831232001-----123210334786
Q gi|254780153|r 169 DATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK-----GGRVMEGLFCGE 243 (391)
Q Consensus 169 D~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 243 (391)
|++|++.+..+|+.++|++.++.||.|||..-.+++++||+|..|++.-++.++.|..|.+.. -.+.....++|+
T Consensus 161 datsa~fa~~~~~~kldv~tfsWqk~lGGeGahG~lilsPrav~rlesy~PaWPlPk~frlt~~~~~~G~k~~~~if~G~ 240 (379)
T TIGR01365 161 DATSAAFAQDLDYEKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKANKDGGGKLSKKIFEGE 240 (379)
T ss_pred HHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCC
T ss_conf 35678887516732012455311222068875315785646787754168877723666654200123303555542465
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH
Q ss_conf 44666448899999999862010318999999997799999998747971676688200365317898247310113734
Q gi|254780153|r 244 TINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDIN 323 (391)
Q Consensus 244 ~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~ 323 (391)
|.|||+....-....+|+|....||++.+.+|...+.+.+.+++++.....++...++.||.+.+|+.+.||.+...+.+
T Consensus 241 tintPsml~~ed~l~~l~Wa~s~GGl~~l~~r~~~n~~vl~~~v~k~~W~~~la~~~~~rs~tsvCl~~~dp~~~~~~~~ 320 (379)
T TIGR01365 241 TINTPSMLCVEDYLDALKWAESIGGLKALVARADDNLAVLEAFVAKSSWVDFLAETPEIRSNTSVCLKVVDPDVAALDED 320 (379)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECHHHHHCCHH
T ss_conf 32541356577799888777630307899986666899999986334788987503001022216888616144520012
Q ss_pred HHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r 324 SQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 324 ~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.+..+.+.++..|.+|++++++|.||+++.|+|||++.+++.+|++.|+++|||+|+.
T Consensus 321 ~~a~f~k~l~~~l~ke~~a~diG~yrdaP~GlriWCGatve~~dl~~l~~W~~Wa~~~ 378 (379)
T TIGR01365 321 AQADFAKELVSLLEKEGVAYDIGSYRDAPAGLRIWCGATVEKSDLEALLPWLDWAFAL 378 (379)
T ss_pred HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHC
T ss_conf 3679999999886321300002554447886547512421367899999999887614
No 14
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase; InterPro: IPR012703 Phosphonates are a class of organophosphorus compounds, characterised by a stable C-P bond, which are found in a variety of biologically produced molecules including antiobiotics, lipids, proteins and polysaccharides . The functions of these molecules include phosphorus storage, cell communication, host recognition and chemical warfare. 2-Aminoethylphosphonate (AEP), the most common naturally occurring phosphonate, is an important precursor used in the biosynthesis of phosphonolipids, phosphonoproteins, and phosphonoglycans. This entry represents 2-aminoethylphosphonate-pyruvate transaminase (AEPT)(2.6.1.37 from EC) which catalyses the interconversion of AEP and phosphonoacetaldehyde (P-Ald), coupled with the interconversion of pryuvate and L-alanine. In some bacterial species this is the first step in an AEP degradation pathway which allows them to utilise this compound as a source of carbon, nitrogen and phosphorus. Phosphonoacetaldeyhde hydrolase, often encoded by an adjacent gene, then converts P-Ald to acetaldehyde and phosphate.Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lyase complex as found in Escherichia coli. The crystal structure of AEPT from Salmonella typhimurium has been studied to 2.2 A resolution . The protein is a homodimer where each subunit is composed of two domains, large and small. The large domain forms an alpha-beta complex characteristic of the aspartate transaminase family, while the small domain is comosed of highly twisted beta strands. The active site contains a pyridoxal 5'-phosphate cofactor and is found at the domain interface, being composed of residues from both subunits..
Probab=100.00 E-value=0 Score=398.65 Aligned_cols=344 Identities=19% Similarity=0.153 Sum_probs=289.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCC-C
Q ss_conf 88688877689689999863210365328988999-999999999999688998-57999748734899987532057-8
Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLG-Y 90 (391)
Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~-~ 90 (391)
...+|||=.- -..|.++|....= -=+.+|.+ +.+.++.+|-++....++ |+.++||||||.+.||++-+++. +
T Consensus 5 lLLTPGPLtT-s~~vk~aMl~D~C---tWD~dYn~~~~~~ir~~L~~la~~~~~~YT~VllQGSGtf~VEA~iGs~~pr~ 80 (366)
T TIGR02326 5 LLLTPGPLTT-SKTVKEAMLVDWC---TWDSDYNEDVVESIRQKLLKLATAEEEKYTTVLLQGSGTFAVEAVIGSAVPRK 80 (366)
T ss_pred CCCCCCCCCH-HHHHHHHHHCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCC
T ss_conf 5357887630-0688886621045---87155313679999999999860689854678612751255566541124788
Q ss_pred CCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-------CCCCEEEEEEECCCCEEECCEEE--ECC
Q ss_conf 9707-9970736888887653238763067405777657867678-------55657997420242022032035--025
Q gi|254780153|r 91 RGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-------FDRDVVFVWNGTTSGVCVPDVGF--IPE 160 (391)
Q Consensus 91 ~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~v~~~h~ETstGv~~~~~~~--~~~ 160 (391)
++++ ++.||.||.|.++++.-+.. .....+..+...++..+++ ...+++++|+||+||++||+.++ +.+
T Consensus 81 ~~klLv~~NGAYG~R~~~ia~~l~i-~~~~~~~~E~~~~~~~~ve~~L~~dp~ItH~A~vHcETtTGiLNPi~~~~~~~~ 159 (366)
T TIGR02326 81 DGKLLVVINGAYGKRIAQIAEYLQI-PHHVVETEENEPTNVVEVEAILAADPAITHVALVHCETTTGILNPIEAVAKVAK 159 (366)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf 9738997178534789999998478-616751587777788999999851897127889836752662112899999998
Q ss_pred CCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf 68614886401101102545568--5799970012001766515445677888765411445778312320011232103
Q gi|254780153|r 161 SREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391)
Q Consensus 161 ~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
.+|..+||||+||||+.|+|..+ +|.+++|++||+.|.||++||+.+...|+++.. ..++|.++.+.++..+
T Consensus 160 ~hGk~~ivDAMSSfGgi~idi~~l~~D~LIssanKCi~GVPGfgFviA~~~~L~~~~g------~arSLsLDLydQw~~M 233 (366)
T TIGR02326 160 RHGKVTIVDAMSSFGGIPIDIAELDIDYLISSANKCIQGVPGFGFVIAKQAELEKCAG------NARSLSLDLYDQWECM 233 (366)
T ss_pred HCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC------CCCHHHHHHHHHHHHH
T ss_conf 5597799853411376001164325676352347813376843667768999986204------3210235489999996
Q ss_pred C-CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 3-478644666448899999999862010318999999997799999998747971676688200365317898247310
Q gi|254780153|r 239 L-FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317 (391)
Q Consensus 239 ~-~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~ 317 (391)
. ..|+|+||+|||.+.|+.+||.++++|||+.+|++|++.+.+.|.+.+.+++ |..++ +++.+||.+++|..|....
T Consensus 234 ~~~~GkWRFTsPTHvV~Af~qAL~el~~EGGv~aR~~RY~~nq~~L~~~m~~LG-F~~ll-~~~~~sPIItsF~~P~~~~ 311 (366)
T TIGR02326 234 EKQHGKWRFTSPTHVVHAFAQALLELEKEGGVEARYQRYQSNQKLLVAGMRALG-FEPLL-DDELQSPIITSFYSPEDPD 311 (366)
T ss_pred HCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCEEEEEECCCCCC
T ss_conf 448996221772689999999999998458974578999999999999998615-51147-5434588689850778897
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r 318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.. .+++..++.+.|-++..|.= +.-..||||++|.|+.+||.+|+.+|+.+.+
T Consensus 312 y~---------F~~fY~~lk~~GFviYPGKv-s~~~~FRiG~IG~V~~~di~~l~~~I~~~~~ 364 (366)
T TIGR02326 312 YR---------FADFYQRLKEQGFVIYPGKV-SQVDTFRIGNIGDVDAADIERLVTAIGKALY 364 (366)
T ss_pred CH---------HHHHHHHHHHCCCEECCCCC-CCCCCEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 13---------89999999767817627610-4566211167676388999999999998750
No 15
>TIGR01366 serC_3 phosphoserine aminotransferase, putative; InterPro: IPR006272 These sequences represent a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria. ; GO: 0009058 biosynthetic process.
Probab=100.00 E-value=0 Score=367.20 Aligned_cols=355 Identities=23% Similarity=0.330 Sum_probs=316.8
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHH---HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 899888688877689689999863---21036532898899999999999999968899857999748734899987532
Q gi|254780153|r 10 KPKRPFFSSGPCAKRPGWSLGILE---GALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 10 ~p~~~~F~pGP~~~~p~~v~~~~~---~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n 86 (391)
+|.+..|++||++++++. ++++. ..++|+|||.+..+.++..++++|+++|.+|+.|+|++-.||+|.-|+++...
T Consensus 1 ~P~dGrfG~GPskvr~e~-~~~~~~~~~~~~Gtshrq~~vkn~vG~~r~G~~~lf~lP~Gye~il~~GG~tafWd~a~~G 79 (362)
T TIGR01366 1 KPADGRFGAGPSKVRLEQ-LQALVATAASLLGTSHRQAPVKNLVGKVREGLAELFSLPDGYEVILGNGGATAFWDAATFG 79 (362)
T ss_pred CCCCCCCCCCCCCCCHHH-HHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 989886458732001888-9988721111000210201467777678887899840888607876178731456666653
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCC-CCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCE
Q ss_conf 0578970799707368888876532387-630674057776578676785565799742024202203203502568614
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSL-QDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGL 165 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~l 165 (391)
|++++..++ ..|.|+.++++....... .+..++..+.|..+.....+..+.+++.|||||||+..++.+.-..+.+.|
T Consensus 80 li~~~s~hl-~~Gefs~kfa~a~~~~P~~~eP~~~~~~~G~~P~~~~~~~~dv~~~~hnetstG~~~~~~r~~G~~~~~l 158 (362)
T TIGR01366 80 LIEKKSLHL-SFGEFSSKFAKAAKLAPWLDEPEIVTADPGDAPEPQAEEGVDVIAWAHNETSTGVAVPVRRPEGSDEGAL 158 (362)
T ss_pred HHHHCCCCC-CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEE
T ss_conf 343111211-0003567887765407642487477327888853000045315675124544532677640357888407
Q ss_pred EEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC-CCCCCHHHCCHHHHHHCCCCCCCC
Q ss_conf 8864011011025455685799970012001766515445677888765411445-778312320011232103347864
Q gi|254780153|r 166 VICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS-WPLPKIFRMVKGGRVMEGLFCGET 244 (391)
Q Consensus 166 livD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 244 (391)
+++|++|..|++|+|..+-|+.|++.|||+..-.|+.+.++||.|++|.+.+... ++.|.++++.. +..+..++||
T Consensus 159 v~~datsGaGGlPvdi~~~d~yyf~Pqk~fasdGGlW~~~~sPaa~~r~e~~~a~~r~~P~fl~l~~---a~~ns~knqt 235 (362)
T TIGR01366 159 VVIDATSGAGGLPVDIKETDVYYFAPQKSFASDGGLWLAVMSPAALERIEKIAASGRFVPEFLSLPT---AVDNSLKNQT 235 (362)
T ss_pred EEEECCCCCCCCCEEECCCCEEEECCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHH---HHHHHHHCCC
T ss_conf 9997467888752000026135523542212355302315255889988876522563402433577---8765441123
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf 46664488999999998620103189999999977999999987479716766882003653178982473101137345
Q gi|254780153|r 245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINS 324 (391)
Q Consensus 245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~ 324 (391)
+|||++..+..|.++++|+..+||++...+|....+..+|.|.+......+|+.++..||..+-++.+.|...
T Consensus 236 yntPa~atl~ll~~q~~W~~~~GGld~~~~rt~~ss~~ly~Wa~~~~~~~P~v~d~~~rs~v~Gtidf~d~~d------- 308 (362)
T TIGR01366 236 YNTPAVATLLLLDEQVDWLNGNGGLDFAVARTKDSSSRLYSWAEEREYATPFVADPAKRSQVVGTIDFSDDID------- 308 (362)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCC-------
T ss_conf 3517999999999888886338871054565578899998776410246861005333303676640244400-------
Q ss_pred HHHHHHHHHHHHHHCCEEECCCCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 67888999998886282872665567675-0568615888999999999999999999
Q gi|254780153|r 325 QKSFCKSMLSFLEKEEIAYDIGSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 325 ~~~~~~~~~~~l~~~g~~~~~~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
+..+....+.|+++++.+||+.|+ ++||++++++++.||++|.+++||+..+
T Consensus 309 -----a~~~ak~lranGi~dtePyrklGrnqlr~~mfPa~~~~dv~~lt~~~d~~~~~ 361 (362)
T TIGR01366 309 -----AAVVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPADVEALTECVDFVVEK 361 (362)
T ss_pred -----HHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf -----78999998745721365012414100124430565867899999888888616
No 16
>TIGR01979 sufS cysteine desulfurases, SufS subfamily; InterPro: IPR010970 Cysteine desulphurases are pyridoxal-phosphate enzymes which catalyse the removal of sulphur from L-cysteine to form L-alanine and elemental sulphur. These enzymes have been shown to play an important role in the biosynthesis of iron-sulphur clusters, thionucleosides in tRNA, thiamine, biotin, lipoate and molydopterin This entry represents a subfamily of NifS-related cysteine desulphurases that are often involved in iron-sulphur cluster formation, which is needed for nitrogen fixation and other vital functions . Many of these enzymes, in addition to cysteine desulphurase activity, also show selenocysteine lyase activity where L-selenocysteine is converted to L-alanine and selenide . Some of these enzymes are much more specific for selenocysteine than cysteine and are thus believed to function in selenium metabolism rather than sulphur metabolism. Structural studies of the E. coli and Synechocystis enzymes indicate that they are homodimers which show a similar fold to other members of the alpha family of pyridoxal-phosphate enzymes .; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=100.00 E-value=5.6e-37 Score=254.35 Aligned_cols=349 Identities=17% Similarity=0.182 Sum_probs=278.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCC---CC-----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 86888776896899998632103653---28-----98899999999999999968899857999748734899987532
Q gi|254780153|r 15 FFSSGPCAKRPGWSLGILEGALLGRS---HR-----CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 15 ~F~pGP~~~~p~~v~~~~~~~~l~~s---HR-----s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n 86 (391)
++=.+-|.+.|..|++++..-.=..+ || |.+..+.|+++|+.++++.|++.+.|++| +.|+|.+...++.+
T Consensus 22 YLDsAAT~QKP~~Vida~~~yY~~~nANVHRG~H~Ls~~AT~~YE~~R~kva~FiNA~~~~EIvF-T~gtTe~iNLvA~s 100 (409)
T TIGR01979 22 YLDSAATSQKPQAVIDAVEEYYRKSNANVHRGIHTLSVRATEAYEEAREKVAKFINAASAEEIVF-TRGTTESINLVAYS 100 (409)
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE-ECCCCHHHHHHHHH
T ss_conf 73485100284779999999987516700168999999999999999999998508899854787-07602788999998
Q ss_pred C----CCC----CCEEEEEE-CCHHH--HHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCE
Q ss_conf 0----578----97079970-73688--8887653238763067405777657867678-----5565799742024202
Q gi|254780153|r 87 L----LGY----RGVDVLAW-ESFGL--GWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGV 150 (391)
Q Consensus 87 l----~~~----~~~~~~~~-g~~~~--r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv 150 (391)
+ +++ ||.+++.- ..-++ =| ++++++.++....+.....-..++++++ ..+.|+++|....||+
T Consensus 101 ~g~~~l~~av~pGDeIv~s~mEHHaNiVPW-Q~l~~r~GA~lk~~~l~~~G~ld~~~l~~~~~~~TKlVa~~HvSNVlGt 179 (409)
T TIGR01979 101 WGRSRLKAAVDPGDEIVISEMEHHANIVPW-QLLAERTGATLKFIPLDDDGTLDLDDLEELLTEKTKLVAITHVSNVLGT 179 (409)
T ss_pred HCCCCCHHHCCCCCEEEECCHHHHCCHHHH-HHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHCCCEEEEEEEEECCCCC
T ss_conf 311013425389887984011100121479-9999760987899744887605188899883269829999742022030
Q ss_pred EECCEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf 2032035--02568614886401101102545568--5799970012001766515445677888765411445778312
Q gi|254780153|r 151 CVPDVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 151 ~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
.+|+.++ ++|.+|++++||+.+++.-+|+|+.+ ||..++|++| |.||.|+|+++.+++.||.+......+..-..
T Consensus 180 vnP~~ei~~~AH~~GA~vlvDGAQ~~pH~pvDv~~ldcDFyvFSGHK-myGPtGiGVLYGK~~lLe~MPPf~gGG~MI~~ 258 (409)
T TIGR01979 180 VNPVEEIIKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHK-MYGPTGIGVLYGKEELLEEMPPFLGGGEMIEE 258 (409)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECCH-HHCCCCCEEEHHHHHHHHHCCCCCCCCCEEEE
T ss_conf 14878999998657976998625575898988565578744561004-52576630112788988647784669861578
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391)
-.+..-..|.+-..|.+ -.||||..+.+|..|+||+++. |++++.++-.++...+.+.|.+.++++.+=+.++..--.
T Consensus 259 V~~~~g~ty~~~P~KFE-AGTPniagviGLgaAidYl~~i-G~~~I~~~E~~L~~yal~~L~~ipg~~iyGP~~~~~R~g 336 (409)
T TIGR01979 259 VSLEEGTTYNEAPHKFE-AGTPNIAGVIGLGAAIDYLEKI-GLEKIEAHEKELTAYALERLGEIPGLRIYGPRDAEDRGG 336 (409)
T ss_pred EEECCCCEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 88057711367875456-8883589999999999998523-878999999999999999960189858746877432643
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC--------CEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 1789824731011373456788899999888628287266556767--------50568615888999999999999999
Q gi|254780153|r 307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP--------LGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~--------~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
++.|.+++-. .+|+...|.++|++++.|.|...| -++|+|.+=++|.||||+|+++|+-+
T Consensus 337 ~isFn~~g~H------------pHDVg~~LD~~GiAvR~GHHCAqPlm~~~~v~atcRASf~~YNT~ediD~Lv~aL~~v 404 (409)
T TIGR01979 337 IISFNVEGVH------------PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYLYNTEEDIDALVEALKKV 404 (409)
T ss_pred EEEECCCCCC------------CCHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 3330258887------------0022301226775686170532489865599636788741038989999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 379 FY 380 (391)
Q Consensus 379 ~~ 380 (391)
-+
T Consensus 405 ~~ 406 (409)
T TIGR01979 405 RK 406 (409)
T ss_pred HH
T ss_conf 98
No 17
>pfam00266 Aminotran_5 Aminotransferase class-V. This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.
Probab=100.00 E-value=1e-35 Score=246.38 Aligned_cols=337 Identities=19% Similarity=0.183 Sum_probs=248.2
Q ss_pred CCCCCCCCHHHHHHHHHHHCCC--------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 8887768968999986321036--------5328988999999999999999688998579997487348999875320-
Q gi|254780153|r 17 SSGPCAKRPGWSLGILEGALLG--------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL- 87 (391)
Q Consensus 17 ~pGP~~~~p~~v~~~~~~~~l~--------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl- 87 (391)
.++.|+++|. |+++|...+.+ .|+++.+..++++++++.+.++++++++++|+|. +|+|.++..++.++
T Consensus 5 ~aattp~~~~-V~~~~~~~~~~~~~np~s~~~~~~~~~~~~~e~aR~~ia~~lga~~~~~i~ft-~~~Te~~n~~~~~~~ 82 (371)
T pfam00266 5 SAATTQKPQA-VLDALQEYYTDYNGNVHRGVHHLGKEATQAYEEAREKVAEFINAPSDEEIIFT-SGTTEAINLVAISLG 82 (371)
T ss_pred CCCCCCCCHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC-CCHHHHHHHHHHHHH
T ss_conf 8123689999-99999999986488856521499999999999999999997193998979984-887899887652345
Q ss_pred --CCCCCEEEEEE-CCHHHHH-HHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE-
Q ss_conf --57897079970-7368888-8765323876306740577765786767-----855657997420242022032035-
Q gi|254780153|r 88 --LGYRGVDVLAW-ESFGLGW-MSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF- 157 (391)
Q Consensus 88 --~~~~~~~~~~~-g~~~~r~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~- 157 (391)
+++|+.+++.. .+.+... +...++..+..+..+........+++++ +..+.|+++|..+.||+.+|+.++
T Consensus 83 ~~~~~gd~ii~s~~eh~s~~~~~~~l~~~~g~~v~~i~~~~~g~i~~~~l~~~i~~~t~lv~~~~v~n~tG~~~pi~~i~ 162 (371)
T pfam00266 83 RRLKPGDEILVTEMEHHANLVPWQELAKRTGATVRVIPVDPNGLLDLDALEKLLTPRTKLVAITHVSNVTGTVNPVEEIG 162 (371)
T ss_pred HCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEECHHHHHH
T ss_conf 31499899999547755236599998762495699935698986989999985689964999967667788240555699
Q ss_pred -ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf -0256861488640110110254556--8579997001200176651544567788876541144577831232001123
Q gi|254780153|r 158 -IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 158 -~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
+++.++++++||+++++|..|+|+. ++|++++|++| |+||+|+|+++++++++++.......+......+......
T Consensus 163 ~~~~~~g~~~~vDa~q~~g~~~id~~~~g~D~~~~s~hK-~~GP~G~G~L~v~~~~~~~l~p~~~g~~~~~~~~~~~~~~ 241 (371)
T pfam00266 163 KLAHEYGALVVVDAAQAVGHRPIDVQALGVDFLAFSGHK-LYGPTGIGVLYGRRDLLEKLPPWKGGGGMIDLVSLLQETT 241 (371)
T ss_pred HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 998636917998751236752203232436569986555-6899843999981577845787567998435654222355
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
+..... .--..||++..++++.++++++.+. |++++.+|..+.++.+++.+.+.++...+. ++..+.+.+++|.++.
T Consensus 242 ~~~~~~-~~e~GT~n~~~~~~l~~al~~~~~~-g~~~i~~~~~~L~~~l~~~L~~~~~~~i~~-~~~~~~~~ivsf~~~~ 318 (371)
T pfam00266 242 FADAPS-KFEAGTPNIAGIIGLGAALDYLAEI-GLEAIEKHERELAAYLYERLLAIPGIRLVP-AVAERRPSIISFNFPG 318 (371)
T ss_pred CCCCHH-HHCCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCCEEEEEECC
T ss_conf 456144-4047899878899999999999981-989999999999999999985599989949-8624668889999599
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHH
Q ss_conf 310113734567888999998886282872665567--------675056861588899999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLL 371 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L 371 (391)
-. ...+...|.++|+.+..|.+.. .+..+|||...+.+.+|||+|
T Consensus 319 ~~------------~~~~~~~L~~~gI~vs~G~~Cs~~~l~~~~~~g~iRiS~~~ynT~eeId~L 371 (371)
T pfam00266 319 VH------------PHDVATLLDERGIAVRSGHHCAQPLMERLGVHGTLRASLYFYNTEEEVDRL 371 (371)
T ss_pred CC------------HHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHCC
T ss_conf 09------------999999973488199764000324448767998899976887999998259
No 18
>PRK09295 selenocysteine lyase; Validated
Probab=100.00 E-value=4.9e-31 Score=216.62 Aligned_cols=346 Identities=14% Similarity=0.151 Sum_probs=242.5
Q ss_pred CCC-CCCCCCCHHHHHHHHHHHCCC---CCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 868-887768968999986321036---53289-----889999999999999996889985799974873489998753
Q gi|254780153|r 15 FFS-SGPCAKRPGWSLGILEGALLG---RSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW 85 (391)
Q Consensus 15 ~F~-pGP~~~~p~~v~~~~~~~~l~---~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~ 85 (391)
+|- ++=|++ |..|+++|..-+.+ ..||+ .+..+.++++++.+.+++++++..+|+| +.|+|.++..++.
T Consensus 26 YlDnaAtt~~-p~~Vi~a~~~~~~~~~~n~~~~~~~~~~~a~~~~e~aR~~iA~~lga~~~~eIvF-ts~~Tea~N~~~~ 103 (406)
T PRK09295 26 YLDSAASAQK-PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQASLFINARSAEELVF-VRGTTEGINLVAN 103 (406)
T ss_pred EECCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCHHHHHHHHH
T ss_conf 9528853789-9999999999998656988864138999999999999999999749999896999-3781699888886
Q ss_pred HC----CCCCCEEEEEECCHHH---HHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEEC
Q ss_conf 20----5789707997073688---888765323876306740577765786767-----85565799742024202203
Q gi|254780153|r 86 SL----LGYRGVDVLAWESFGL---GWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVP 153 (391)
Q Consensus 86 nl----~~~~~~~~~~~g~~~~---r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~ 153 (391)
.+ +++|+.+++..-.+-. -|. ..++..+.++..+..+..-..+++++ +..+.|+++|....||+.+|
T Consensus 104 ~~~~~~~~~gd~vi~s~~EH~s~~~pw~-~l~~~~G~~v~~vp~~~~g~id~~~l~~~i~~~T~LVsv~~vsn~~G~i~p 182 (406)
T PRK09295 104 SWGNSNVRAGDNIIISEMEHHANIVPWQ-MLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENP 182 (406)
T ss_pred HHHHHHCCCCCEEEEECCCCHHHHHHHH-HHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
T ss_conf 6688605898989994664287888999-999964962489803899848599999875379639999713678887178
Q ss_pred CEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 2035--02568614886401101102545568--5799970012001766515445677888765411445778312320
Q gi|254780153|r 154 DVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 154 ~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
+.++ +++.++++++||+++++|..|+|+.+ +|++.+|++| |.||.|+|+++++++.++........+......++
T Consensus 183 v~~I~~~~~~~g~~~~vDaaQ~~g~~~idv~~l~~D~~~~S~HK-l~GP~G~G~Lyv~~~~~~~l~P~~~GG~~~~~~~~ 261 (406)
T PRK09295 183 LAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSL 261 (406)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCEEEEEHHH-CCCCCCEEEEEECHHHHHHCCCCCCCCCCEEEECC
T ss_conf 99999988755854896423466810554666315479986142-26998149999833456317863168863110034
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
.....+.....+. -..||++..+.++..+++++.+. |++.+.++.++..+.+++.+.+.+....+- +..|+ .+++
T Consensus 262 ~~~~~~~~~p~rf-e~GT~n~~~i~gl~aAl~~~~~~-g~~~i~~~~~~L~~~l~~~L~~~~~v~~~g--p~~r~-~ivs 336 (406)
T PRK09295 262 TEGTTWAKAPWRF-EAGTPNTGGIIGLGAALDYVSAL-GLNNIAEYEQNLMHYALSQLEQVPDLTLYG--PQNRL-GVIA 336 (406)
T ss_pred CCCCCCCCCCHHC-CCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCEEEEC--CCCCC-EEEE
T ss_conf 5675535652220-58887688999999999999971-889999999999999999973699989958--87755-0799
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98247310113734567888999998886282872665567--------6750568615888999999999999999999
Q gi|254780153|r 310 MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
|.+.... ..++...|.+.|+.+..|.|.. .+..+|||.+.+.+.+||++|+++|+...+-
T Consensus 337 f~~~~~~------------~~~v~~~L~~~gI~vr~G~~Ca~~~~~~~~~~~~iRvS~~~ynT~eeId~lv~aL~~I~k~ 404 (406)
T PRK09295 337 FNLGKHH------------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHRL 404 (406)
T ss_pred EECCCCC------------HHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9738989------------9999999854998997634333044576289967999788999999999999999999997
No 19
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=8.9e-31 Score=214.96 Aligned_cols=355 Identities=15% Similarity=0.167 Sum_probs=248.0
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf 646899888688877689689999863210---3653289-----88999999999999999688998579997487348
Q gi|254780153|r 7 PTRKPKRPFFSSGPCAKRPGWSLGILEGAL---LGRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391)
Q Consensus 7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~---l~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391)
|.+.-...+|--.-+...|..|+++|..-+ -+..||+ .+..+.++++++.+.+++++++..+++| +.|+|.
T Consensus 14 P~l~~~~iYlD~Aatt~~p~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~e~aR~~iA~llga~~~~eI~f-ts~~Te 92 (401)
T PRK10874 14 PALQDAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDAKNIVW-TRGTTE 92 (401)
T ss_pred CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHH
T ss_conf 3779994897487526899999999999998644898864108999999999999999999829699897999-796589
Q ss_pred HHHHHHHHC----CCCCCEEEEEECCHHH---HHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEEC
Q ss_conf 999875320----5789707997073688---888765323876306740577765786767-----8556579974202
Q gi|254780153|r 79 AVEMALWSL----LGYRGVDVLAWESFGL---GWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGT 146 (391)
Q Consensus 79 ~~ea~~~nl----~~~~~~~~~~~g~~~~---r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ET 146 (391)
++..++..+ +++|+.+++....+-. -|...+++.+ ..+..+.....-.++++.+ +..+.|+++|...
T Consensus 93 ~~n~~~~~~~~~~~~~gd~vv~s~~Eh~s~~~pw~~~~~~~g-~~v~~~p~~~~g~~d~~~l~~~i~~~T~lVai~~vsn 171 (401)
T PRK10874 93 SINMVAQCYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTG-AKVVKLPLGADRLPDVDLLPELITPRSRILALGQMSN 171 (401)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCC
T ss_conf 999999999997358998388704413541589999998539-6369941588887599999998558965999979667
Q ss_pred CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf 42022032035--0256861488640110110254556--8579997001200176651544567788876541144577
Q gi|254780153|r 147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391)
.||+.+|+.++ +++.+++++++|+++++|..|+|+. ++|++.+|++| |+||.|+|+++++++.+++.......+.
T Consensus 172 ~~G~~~pv~~I~~~~~~~g~~~~vDa~Q~~g~~~idv~~l~vD~l~~S~HK-l~GP~G~G~Lyv~~~~~~~l~P~~~Gg~ 250 (401)
T PRK10874 172 VTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHK-LYGPTGIGVLYGKSELLEAMSPWLGGGK 250 (401)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECHH-CCCCCCEEEEEECCCHHHHCCCEECCCC
T ss_conf 886557699999999764977997530137742546678439889987033-1699814999985303642786535875
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
......+..+. . ......--..||++..++++..+++++.+. |++++.++.+..++.+.+.+.+.+++..+-. +
T Consensus 251 ~~~~~~~~~~~-~-~~~~~r~e~GT~n~~~i~~l~aal~~l~~~-~~~~~~~~~~~L~~~~~~~L~~~~g~~~~~~-~-- 324 (401)
T PRK10874 251 MLTEVSFDGFT-P-QSAPWRLEAGTPNVAGVIGLSAALEWLADI-DIEQAESWSRSLATLAEDALAKRPGFRSFRC-Q-- 324 (401)
T ss_pred CCCCCCCCCCC-C-CCCCHHCCCCCCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C--
T ss_conf 40023467654-2-555000257783288999999999999963-9999999999999999999852899653479-9--
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 3653178982473101137345678889999988862828726655676--------75056861588899999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~a 374 (391)
...++.|.+++-. ..++...|.+.|+.+..|.|... ...+|||.+.+.+.+||++|+++
T Consensus 325 -~~~i~sf~~~gi~------------~~~l~~~L~~~gi~v~~g~~ca~~~l~alg~~g~iRvS~~~ynT~~dId~li~a 391 (401)
T PRK10874 325 -DSSLLAFDFAGVH------------HSDMVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNA 391 (401)
T ss_pred -CCCEEEEEECCCC------------HHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf -9988999879959------------999999997789789618534289999859999799965888899999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780153|r 375 LRWVFYFQK 383 (391)
Q Consensus 375 Le~~~~~~k 383 (391)
|+.+.+.++
T Consensus 392 l~~~v~~lr 400 (401)
T PRK10874 392 VDRALELLV 400 (401)
T ss_pred HHHHHHHHC
T ss_conf 999999830
No 20
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.8e-30 Score=212.97 Aligned_cols=355 Identities=15% Similarity=0.171 Sum_probs=247.0
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf 6468998886888776896899998632103---653289-----88999999999999999688998579997487348
Q gi|254780153|r 7 PTRKPKRPFFSSGPCAKRPGWSLGILEGALL---GRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391)
Q Consensus 7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391)
|.+.....+|--.-+...|..|+++|..-+- +..||+ ....++++++++.+.++++.++..+|+| ++|+|.
T Consensus 11 P~l~~~~iYlDnAatt~~p~~V~~a~~~~~~~~~~n~~~s~~~~~~~~~~~~e~aR~~iA~~lga~~~~~Iif-ts~~Te 89 (398)
T TIGR03392 11 PALQDGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVW-TRGTTE 89 (398)
T ss_pred CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHH
T ss_conf 4889990886786326898999999999998634888751439999999999999999999709599897999-587799
Q ss_pred HHHHHHHHC----CCCCCEEEEEECCHH---HHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEEC
Q ss_conf 999875320----578970799707368---8888765323876306740577765786767-----8556579974202
Q gi|254780153|r 79 AVEMALWSL----LGYRGVDVLAWESFG---LGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGT 146 (391)
Q Consensus 79 ~~ea~~~nl----~~~~~~~~~~~g~~~---~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ET 146 (391)
++..++..+ +++|+.+++....+- .-|...+.+.+ ..+..+.......++++.+ +..+.|++.|...
T Consensus 90 ~~n~~~~~~~~~~~~~gd~ii~s~~EH~s~~~pw~~~~~~~g-~~v~~~~~~~~~~~d~~~l~~~i~~~T~lVsi~~vsn 168 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTG-AKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSN 168 (398)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCC
T ss_conf 999898776887239989899824400342389998876448-5279961478898799999985257870899825556
Q ss_pred CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf 42022032035--0256861488640110110254556--8579997001200176651544567788876541144577
Q gi|254780153|r 147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391)
.||+.+|+.++ +++.+++++++|+++++|..|+|+. ++|++.+|++| |+||.|+|+++++++.+++.......+.
T Consensus 169 ~~G~i~pi~~I~~~~~~~g~~~~vDa~Q~~g~~~idv~~~~~D~~~~S~hK-l~GP~G~G~Ly~~~~~~~~l~p~~~Gg~ 247 (398)
T TIGR03392 169 VTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHK-LYGPTGIGVLYGKTELLEAMPPWQGGGK 247 (398)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCEEEEEECCHHHHHCCCCCCCCC
T ss_conf 788858799999999865974786334115620334102678779986553-5699841899984114743797357997
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
.....++..+. . +.....--..||++..++++..+++++.+. |++.+.++.....+.+.+.+.+.++...+-. +
T Consensus 248 ~~~~~~~~~~~-~-~~~~~r~e~GT~n~~~i~gl~~al~~l~~~-~~~~~~~~~~~L~~~~~~~l~~l~g~~~~~~-~-- 321 (398)
T TIGR03392 248 MLSHVSFDGFI-P-QAVPHRFEAGTPNIAGVIGLSAALEWLTDI-DIAAAEAWSVSLADLAEERLAQLPGFRSFRC-P-- 321 (398)
T ss_pred CCCCCCCCCCC-C-CCCCHHCCCCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C--
T ss_conf 34433477764-4-555021146885487899999999999964-9999999999999999999863899644579-9--
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 3653178982473101137345678889999988862828726655676--------75056861588899999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~a 374 (391)
...++.|.+++-. ..++...|.+.|+.+..|.|... ...+|||.+.+.+.+||++|+++
T Consensus 322 -~~~~~~f~~~~~~------------~~~l~~~L~~~gi~v~~G~~ca~~~l~a~g~~g~iRvS~~~ynT~edId~li~a 388 (398)
T TIGR03392 322 -GSSLLAFDFAGVH------------HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDA 388 (398)
T ss_pred -CCCEEEEEECCCC------------HHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf -9967999879939------------999999997789799668665489999868998799967888899999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780153|r 375 LRWVFYFQK 383 (391)
Q Consensus 375 Le~~~~~~k 383 (391)
|+.+.+.++
T Consensus 389 L~~~l~~l~ 397 (398)
T TIGR03392 389 VGAALELLN 397 (398)
T ss_pred HHHHHHHHC
T ss_conf 999999843
No 21
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-31 Score=215.21 Aligned_cols=348 Identities=17% Similarity=0.193 Sum_probs=256.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 886888776896899998632103---653289-----889999999999999996889985799974873489998753
Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALL---GRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW 85 (391)
Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~ 85 (391)
.+|-..-+...|..|++++..... ..-||+ ....+.++++++.++++++.+...+|+| +.+.|.+...+..
T Consensus 24 vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvf-t~~tT~aln~va~ 102 (405)
T COG0520 24 VYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVF-TRGTTEALNLVAR 102 (405)
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE-ECCHHHHHHHHHH
T ss_conf 763676566678899999999999740245755441279999999999999999819998772999-5983799999999
Q ss_pred HC---CCCCCEEEEEECCHH---HHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECC
Q ss_conf 20---578970799707368---8888765323876306740577765786767-----855657997420242022032
Q gi|254780153|r 86 SL---LGYRGVDVLAWESFG---LGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPD 154 (391)
Q Consensus 86 nl---~~~~~~~~~~~g~~~---~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~ 154 (391)
.+ +.+|+.+++..-.+- .-| ...++..+..+..+.....-..+.+.+ +..+.|+++|....||+.+|+
T Consensus 103 ~l~~~~~~gdeIv~s~~EH~sn~~pw-~~~~~~~Ga~v~~i~~~~~g~~~~d~~~~~i~~~Tklvais~vSn~tG~~~pv 181 (405)
T COG0520 103 GLGRSLKPGDEIVVSDLEHHSNIVPW-QELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPV 181 (405)
T ss_pred HHHHHHCCCCEEEEECCCCCCCHHHH-HHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCH
T ss_conf 70241068998998046552008999-99998759689998418999728899986469994499996641675540409
Q ss_pred EEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf 035--0256861488640110110254556--857999700120017665154456778887654114457783123200
Q gi|254780153|r 155 VGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV 230 (391)
Q Consensus 155 ~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~ 230 (391)
.++ +++.++++++||++++++.+|+|+. ++|++++|++|.|+||.|+|+++++++.++++......+....+.+..
T Consensus 182 ~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~ 261 (405)
T COG0520 182 KEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRD 261 (405)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCEEECCCC
T ss_conf 99999999849989997713347566885561898999767432579985299998665584378977788724401445
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 11232103347864466644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391)
Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391)
....+.....+ ---.||++..++++..+++++++. |++++.++.++..+.+++.+...++...+...++.| ..+++|
T Consensus 262 ~~~~~~~~p~r-fe~gTpn~~~~i~l~aAl~~~~~i-g~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r-~~~vsF 338 (405)
T COG0520 262 EGVTLAELPLR-FEAGTPNIAGAIGLAAALDYLLEI-GMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADR-GGIVSF 338 (405)
T ss_pred CCCEECCCHHH-CCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-CCEEEE
T ss_conf 55301564153-155784378898699999999985-799999999999999999985489849964663467-746999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 82473101137345678889999988862828726655676--------750568615888999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
.++.. ...++...|.++|+.+..+.|... ..++|+|.+-+.+.+||++|+++|+.+
T Consensus 339 ~v~~~------------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 339 NVKGI------------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred EECCC------------CHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 97895------------98999999986786998256443267875377775799974259999999999999987
No 22
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=6.4e-30 Score=209.54 Aligned_cols=338 Identities=14% Similarity=0.132 Sum_probs=234.9
Q ss_pred CCCCCCCHHHHHHHHHHHCC---CCCCC-----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-
Q ss_conf 88776896899998632103---65328-----9889999999999999996889985799974873489998753205-
Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALL---GRSHR-----CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL- 88 (391)
Q Consensus 18 pGP~~~~p~~v~~~~~~~~l---~~sHR-----s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~- 88 (391)
++=|+++|. |+++|...+. +..|| +.+..++++++++.+.++++.++..+|+| +.|+|.++..++.++.
T Consensus 6 aatt~~~~~-V~~~~~~~~~~~~~np~~~~~~~~~~a~~~le~aR~~ia~~lg~~~~~eI~f-ts~aTea~n~~~~~l~~ 83 (373)
T cd06453 6 AATSQKPQP-VIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIF-TRNTTEAINLVAYGLGR 83 (373)
T ss_pred CCCCCCCHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCCHHHHHHHHHHHHHH
T ss_conf 764689999-9999999999758998730509999999999999999999749699897999-18867998788653020
Q ss_pred --CCCCEEEEEECCHHH-H-HHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE--
Q ss_conf --789707997073688-8-88765323876306740577765786767-----855657997420242022032035--
Q gi|254780153|r 89 --GYRGVDVLAWESFGL-G-WMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF-- 157 (391)
Q Consensus 89 --~~~~~~~~~~g~~~~-r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~-- 157 (391)
++|+.+++....+-. . -+...++..+..+..+..+..-..+++++ +..+.|++.|....||+.+|+.++
T Consensus 84 ~~~~gd~Vi~s~~EH~s~~~p~~~la~~~G~~v~~ip~~~~G~i~~~~l~~~i~~~T~lV~~~~v~n~tG~~~pi~~I~~ 163 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGE 163 (373)
T ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 26999989976011124278999998705958985078978858899999754589569999785667760887999999
Q ss_pred ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 0256861488640110110254556--85799970012001766515445677888765411445778312320011232
Q gi|254780153|r 158 IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 158 ~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
+++.++++++||+++++|..|+|+. ++|++.++++| |+||.|+|+++++++.+++.......+..........+ .+
T Consensus 164 ~~~~~g~~~~vDa~Qa~g~~~idv~~~~~D~~~~s~hK-~~GP~G~G~Lyv~~~~~~~l~p~~~gg~~~~~~~~~~~-~~ 241 (373)
T cd06453 164 IAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHK-MLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET-TY 241 (373)
T ss_pred HHHHCCCEEEEECCCCCCCCCCCHHHHHCCEEEEECHH-CCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCC-CC
T ss_conf 99874976998762124554651777627738976101-15888349999860145247833168875333234322-22
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391)
.....+. -..||++..++++.++++++.+. |++++.+|..+..+.+++.+.+.++.... .++..|+. +++|.++.-
T Consensus 242 ~~~~~rf-e~GT~n~~~i~~l~~al~~~~~~-g~~~i~~~~~~L~~~l~~~L~~l~~v~i~-~~~~~r~~-ivsf~~~~~ 317 (373)
T cd06453 242 ADLPHKF-EAGTPNIAGAIGLGAAIDYLEKI-GMEAIAAHEHELTAYALERLSEIPGVRVY-GDAEDRAG-VVSFNLEGI 317 (373)
T ss_pred CCCCCCC-CCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCCEEC-CCCCCCCC-EEEEEECCC
T ss_conf 5552202-55675588999999999999984-89999999999999999999638997624-88455688-899996995
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 10113734567888999998886282872665567--------6750568615888999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
. ...+...|.++|+.+..|.+.. .+..+|||...+.+++|||+|+++|
T Consensus 318 ~------------~~~v~~~L~~~gI~vs~G~~Ca~~~~~~~g~~g~iRvS~~~ynt~~dId~li~al 373 (373)
T cd06453 318 H------------PHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred C------------HHHHHHHHHHCCEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf 9------------9999999967992997863324488997289987999688889999999999559
No 23
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.97 E-value=5.7e-29 Score=203.48 Aligned_cols=335 Identities=15% Similarity=0.166 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHC------CCCC-CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-CCC--CCCE
Q ss_conf 689999863210------3653-289-8899999999999999968899857999748734899987532-057--8970
Q gi|254780153|r 25 PGWSLGILEGAL------LGRS-HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-LLG--YRGV 93 (391)
Q Consensus 25 p~~v~~~~~~~~------l~~s-HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-l~~--~~~~ 93 (391)
|+.|.++|..-+ .||+ ||. -+....+.|+|+.|++||++|+..+|+| +-++|.+...++.- .++ +|+.
T Consensus 13 P~ev~~a~~~~~~~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~F-t~nAT~aLN~~L~Gl~lknr~g~h 91 (384)
T TIGR01977 13 PDEVYEAMADFLKNYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVF-TNNATTALNIALKGLILKNREGDH 91 (384)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEE-ECCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 3899999999987348756888750345414228899999999848897462784-060779999998433000559996
Q ss_pred EEEEE-CCHHH-HHHHHHHHCC-CCCEEEEECCCCCCCCHHHC----CC--CCCEEEEEEECCCCEEECCEEE---ECCC
Q ss_conf 79970-73688-8887653238-76306740577765786767----85--5657997420242022032035---0256
Q gi|254780153|r 94 DVLAW-ESFGL-GWMSDIRQLS-LQDVREFTAPYGSLPDFSKV----DF--DRDVVFVWNGTTSGVCVPDVGF---IPES 161 (391)
Q Consensus 94 ~~~~~-g~~~~-r~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~~--~~~v~~~h~ETstGv~~~~~~~---~~~~ 161 (391)
+++.. .+-+- |=...+++.. +..+.......--..+++++ +. .+.+.+.|....||+.+|++++ +++.
T Consensus 92 Vi~t~mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~kTk~iv~~HaSNV~G~ilpiEEIgR~lA~e 171 (384)
T TIGR01977 92 VITTPMEHNSVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKNKTKLIVVSHASNVTGTILPIEEIGRELAKE 171 (384)
T ss_pred EEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHHHH
T ss_conf 78647602366438999973599758998627888521679999853378830043220030103112578999999986
Q ss_pred CCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf 8614886401101102545568--57999700120017665154456778887654114457783123200112321033
Q gi|254780153|r 162 REGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239 (391)
Q Consensus 162 ~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (391)
++.++|+||++++|..|+|+++ +|++.+..+|+|.||.|.|-.+++++.-+-+..+...+--..+.++... ..+.++
T Consensus 172 ~g~~~~~DAaQtAGv~~Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~e~~~~~l~pl~~GGTGs~S~~~~~P-~~~Pdr 250 (384)
T TIGR01977 172 NGIFFILDAAQTAGVIPIDMEELAIDMLAFTGHKGLLGPQGTGGLIIKEGIKEILKPLKSGGTGSHSALIDQP-SELPDR 250 (384)
T ss_pred CCCEEEEECCCCCCCCHHCCCHHHCCEEEECCCHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCC-CCCCCH
T ss_conf 7973998320003754101032206767637752200113631578873705674532068875453444577-604320
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 47864466644889999999986201031899999999779999999874797167668820036531789824731011
Q gi|254780153|r 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS 319 (391)
Q Consensus 240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~ 319 (391)
+.-. |-|+.+|.+|+++++|+++. |+.++.++-..+.+.+-+.|.+.....-+=+.+...-..++.|.+..=
T Consensus 251 fE~G---TLN~pGI~gL~agik~~~~~-gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~~~~~vvSf~~~g~---- 322 (384)
T TIGR01977 251 FESG---TLNTPGIAGLNAGIKFIEKI-GIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPAKRVGVVSFTVEGI---- 322 (384)
T ss_pred HCCC---CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCEEEEEECCC----
T ss_conf 1144---00379999998887887564-477899999999999987401678067627703433267589983488----
Q ss_pred CCHHHHHHHHHHHHHHHHHCC-EEECCCCC------CCCCC----EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 373456788899999888628-28726655------67675----056861588899999999999999
Q gi|254780153|r 320 LDINSQKSFCKSMLSFLEKEE-IAYDIGSY------RDAPL----GLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~------r~~~~----~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
....+...|.++. ++++.|-| +.+|. .+|+|.+...++|||+.|++||++
T Consensus 323 --------d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R~S~gyFnt~ee~~~l~~al~~ 383 (384)
T TIGR01977 323 --------DSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLVEALSE 383 (384)
T ss_pred --------CHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf --------8778999998618918976766641230353116765388727877888999999999850
No 24
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=4.9e-28 Score=197.55 Aligned_cols=330 Identities=14% Similarity=0.083 Sum_probs=228.7
Q ss_pred CCCCHHHHHHHHHHHCCCC--C----CC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC----CC
Q ss_conf 7689689999863210365--3----28-988999999999999999688998579997487348999875320----57
Q gi|254780153|r 21 CAKRPGWSLGILEGALLGR--S----HR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL----LG 89 (391)
Q Consensus 21 ~~~~p~~v~~~~~~~~l~~--s----HR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl----~~ 89 (391)
|+++|+ |+++|...+.+. + |+ +....++++++++.+.++++.+.+ +|+| ++|+|.+.-.++..+ ..
T Consensus 10 tp~~~~-v~~a~~~~~~~~~~N~~s~h~~~~~a~~~~e~aR~~ia~~lga~~~-~IvF-Tsg~Tes~nlai~~~~~~~~~ 86 (381)
T PRK02948 10 TPMSEE-ALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGKEQ-GVYF-TSGGTESNYLAIQSLLNALPQ 86 (381)
T ss_pred CCCCHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CEEE-ECCHHHHHHHHHHHHHHHHCC
T ss_conf 999999-9999999998706898514179999999999999999998099978-0899-288769999999999997057
Q ss_pred CCCEEEEEECCH-H-HHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE--ECC
Q ss_conf 897079970736-8-88887653238763067405777657867678-----55657997420242022032035--025
Q gi|254780153|r 90 YRGVDVLAWESF-G-LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF--IPE 160 (391)
Q Consensus 90 ~~~~~~~~~g~~-~-~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~--~~~ 160 (391)
+++.+++..-.. + ..|...+++.+ ..+..+..+..-..++++++ ....|+++|....||+.+|+.++ +++
T Consensus 87 ~g~~ii~s~~EH~sv~~~~~~l~~~G-~~v~~i~~d~~G~id~~~l~~~l~~~t~LV~v~~asN~tG~i~pi~~I~~~a~ 165 (381)
T PRK02948 87 NKKHIITTPMEHASIHSYFQSLESQG-YTVTEIPVDKSGLIRLVDLERAITEDTVLASIQHANSEIGTIQPIAEIGALLK 165 (381)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECEEECCCCCCCHHHHHHHHH
T ss_conf 99989974642200789999999729-98999677888876999999756899469999750206864775889999998
Q ss_pred CCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf 6861488640110110254556--85799970012001766515445677888765411445778312320011232103
Q gi|254780153|r 161 SREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391)
Q Consensus 161 ~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
.++++++||++++++..|+|+. ++|.+.+|++| |+||.|+|+++++++.. .. |.+ . ...
T Consensus 166 ~~g~~~~vDa~Q~~g~~~idv~~l~~D~~~fS~HK-~~GP~GiG~L~~~~~~~-----~~-----~~~---~-----g~~ 226 (381)
T PRK02948 166 KYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHK-IYGPKGVGAVYINPQVR-----WK-----PVF---P-----GTS 226 (381)
T ss_pred HHCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEHHC-CCCCCCEEEEEECCCCC-----CC-----CCC---C-----CCC
T ss_conf 70987984656614651665344677625620000-45887259999878986-----55-----566---8-----988
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 34786446664488999999998620103189999999977999999987479716766882003653178982473101
Q gi|254780153|r 239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391)
Q Consensus 239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391)
+..+--+.||++..|.++..+++++.+ +++...++.++..+.+++.+...+.-......+..|.+.++.|.+++-.
T Consensus 227 ~e~~~~~GT~nv~gi~~l~~A~~~~~~--~~~~~~~~~~~L~~~l~~~l~~~~~~~~~~~~~~~~~p~i~~~~~~~~~-- 302 (381)
T PRK02948 227 HEKGFRPGTVNVPGIAAFLTAAENILK--NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGFE-- 302 (381)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCC--
T ss_conf 789766786759999999999999986--4999999999999999999854799746568863456867887338868--
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC-------------------CEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 1373456788899999888628287266556767-------------------505686158889999999999999999
Q gi|254780153|r 319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP-------------------LGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~-------------------~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
-..+...|.+.|+.+..|.+...+ ..+|||.+-+.+.+|||+|+++|+...
T Consensus 303 ----------~~~~~~~l~~~gI~v~~GsaCa~~~~~~s~~l~a~g~~~~~a~~~vRvS~g~ynT~eeId~~i~al~~i~ 372 (381)
T PRK02948 303 ----------GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIG 372 (381)
T ss_pred ----------HHHHHHHCCCCCCEEECCHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf ----------8999985421681897804527898870089997599878809259997479999999999999999999
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999998775119
Q gi|254780153|r 380 YFQKISFLRAIS 391 (391)
Q Consensus 380 ~~~k~~~~~~~~ 391 (391)
++ |.|++|
T Consensus 373 ~~----f~r~~~ 380 (381)
T PRK02948 373 NQ----FYRGVK 380 (381)
T ss_pred HH----HHHHCC
T ss_conf 99----820216
No 25
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=1.2e-27 Score=195.16 Aligned_cols=328 Identities=17% Similarity=0.133 Sum_probs=228.4
Q ss_pred CCCCCCCHHHHHHHHHHHCCC-------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--
Q ss_conf 887768968999986321036-------53289889999999999999996889985799974873489998753205--
Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLG-------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-- 88 (391)
Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~-------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-- 88 (391)
++=|+++|+ |++++..-+.. .++.+.+..++++++++.+.++++++.+ +|+| ++|+|.++..++..+.
T Consensus 6 AAtt~~~~~-V~~a~~~~~~~~~~np~~~h~~~~~a~~~~e~aR~~iA~~lga~~~-eIvF-t~~~T~a~n~~i~~~~~~ 82 (379)
T TIGR03402 6 NATTRVDPE-VLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIF-TSGGTESDNTAIKSALAA 82 (379)
T ss_pred CCCCCCCHH-HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEE-ECCHHHHHHHHHHHHHHH
T ss_conf 665889999-9999999999658997765899999999999999999998299967-3999-288799999999999986
Q ss_pred -CCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEEEC-CCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE--
Q ss_conf -789707997073688--8887653238763067405-77765786767-----855657997420242022032035--
Q gi|254780153|r 89 -GYRGVDVLAWESFGL--GWMSDIRQLSLQDVREFTA-PYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF-- 157 (391)
Q Consensus 89 -~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~-- 157 (391)
.+++.+++..-.+.. +.+..+++. +..+..+.. +.|. .+++++ +..+.|+++|....||+.+|+.++
T Consensus 83 ~~~~d~Ii~s~~eH~a~~~~~~~l~~~-g~~v~~~~~~~~g~-id~~~l~~~l~~~T~lvs~~~~sn~tG~i~pv~~I~~ 160 (379)
T TIGR03402 83 QPEKRHIITTAVEHPAVLSLCQHLEKQ-GYKVTYLPVDEEGR-LDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGE 160 (379)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHC-CCEEEEEECCCCCC-CCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
T ss_conf 799999998013104566799999965-98899970378982-6426678872678628996125788870178999999
Q ss_pred ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 0256861488640110110254556--85799970012001766515445677888765411445778312320011232
Q gi|254780153|r 158 IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 158 ~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
+++.+++++++|+++++|..|+|+. ++|++.+|++| |+||.|+|++++++.. + ..+. ..- .
T Consensus 161 ~~~~~g~~~~vDa~Q~~g~~pidv~~~~~D~~~~S~hK-~~GP~G~G~Ly~r~~~--~---~~P~-----~~G--g---- 223 (379)
T TIGR03402 161 IAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGT--R---FRPL-----LRG--G---- 223 (379)
T ss_pred HHHHCCCEEEEECCCCCCCCCCCHHHHCCCCEECCHHH-CCCCCCEEEEEECCCC--C---CCCC-----CCC--C----
T ss_conf 99763988994531124664640344157721202111-3688725999982676--6---6876-----788--8----
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 1033478644666448899999999862010318999999997799999998-747971676688200365317898247
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI-QENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i-~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
....+.-..||++..+.++..++++..+ +++....|.++..+.+.+.+ ...+.... ..++..|.+.++.|.++.
T Consensus 224 --~~e~~~~~GT~n~~~i~gl~~a~~~~~~--~~~~~~~~~~~l~~~l~~~ll~~~~~~~i-~g~~~~r~p~~~~~~~~~ 298 (379)
T TIGR03402 224 --HQERGRRAGTENVPGIVGLGKAAELATE--HLEEENTRVRALRDRLEAGLLARIPDARL-NGDPTKRLPNTVNISFEY 298 (379)
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCCHHHCCCCCEEECCCC
T ss_conf --8777767897129999999999999997--59999999999999999999850898275-478666488730323699
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC-------------------CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 3101137345678889999988862828726655676-------------------750568615888999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA-------------------PLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~-------------------~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
-. ...+...|.++|+.+..|.+... ...+|||...+.+.+||++|+++|
T Consensus 299 ~~------------~~~i~~~L~~~gI~v~~G~~Ca~~~~~ps~vL~a~g~~~~~~~g~iRvS~~~ynT~edId~li~aL 366 (379)
T TIGR03402 299 IE------------GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVL 366 (379)
T ss_pred CC------------HHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 89------------999999845189299750321599986249999759983333956999738999999999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780153|r 376 RWVFYFQKI 384 (391)
Q Consensus 376 e~~~~~~k~ 384 (391)
+.+.++.|+
T Consensus 367 ~~iv~~lr~ 375 (379)
T TIGR03402 367 PPIIARLRA 375 (379)
T ss_pred HHHHHHHHH
T ss_conf 999999985
No 26
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation.
Probab=99.96 E-value=1.2e-26 Score=188.83 Aligned_cols=330 Identities=16% Similarity=0.108 Sum_probs=234.8
Q ss_pred CCCCCCCHHHHHHHHHHHCCCC------CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--
Q ss_conf 8877689689999863210365------328-9889999999999999996889985799974873489998753205--
Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLGR------SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-- 88 (391)
Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~~------sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-- 88 (391)
+.=|+++|+ |+++|..-+-+. .|+ +.+..+.++++++.+.++++.++..+|+| ++|+|.+...++..+.
T Consensus 6 aAtt~~~~~-Vi~~~~~~~~~~~~Np~s~h~~~~~a~~~~e~aR~~ia~~l~a~~~~eIvF-Tsg~Tea~N~~~~gl~~~ 83 (382)
T TIGR03403 6 NATTMLDPK-VKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIII-TSCATESNNWVLKGVYFD 83 (382)
T ss_pred CCCCCCCHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHH
T ss_conf 356899999-999999999866899632539999999999999999999759699786999-387589999999999999
Q ss_pred ---CCC-CEEEEEECC-HH-HHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE
Q ss_conf ---789-707997073-68-88887653238763067405777657867678-----55657997420242022032035
Q gi|254780153|r 89 ---GYR-GVDVLAWES-FG-LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF 157 (391)
Q Consensus 89 ---~~~-~~~~~~~g~-~~-~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~ 157 (391)
.++ +.+++..-. -+ ..+...+.+.+ ..+..+..+..-..++++++ ....|+++|....||+.+|+.++
T Consensus 84 ~~~~~~~~~ii~s~~EH~sv~~~~~~l~~~G-~~v~~~~~d~~G~~d~~~l~~~l~~~T~LVai~~anN~tG~i~pv~~I 162 (382)
T TIGR03403 84 EILKGGKNHIITTEVEHPAVRATCAFLESLG-VEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEI 162 (382)
T ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH
T ss_conf 8636899999995565153899999999659-789997759998588999997601466067763147677777879999
Q ss_pred --ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf --0256861488640110110254556--857999700120017665154456778887654114457783123200112
Q gi|254780153|r 158 --IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 158 --~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
+++++++++++|+++++|..|+|+. ++|.+.+|++| |+||.|+|++++++.. ...+. +.-.
T Consensus 163 ~~~~~~~g~~~~vDa~Q~~g~~pidv~~l~~D~l~~S~HK-~~GP~GiG~L~ir~~~-----~l~P~-----~~Gg---- 227 (382)
T TIGR03403 163 GEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHK-FHGPKGVGGLYIRKGV-----ELTPL-----FHGG---- 227 (382)
T ss_pred HHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEHHH-CCCCCCEEEEEECCCC-----CCCCC-----CCCC----
T ss_conf 9999872987996713413564643232346524531010-3688834999986777-----65876-----5898----
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 32103347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391)
....+--..||++..+.++.++++...+ .++...++.++..+.+++.+...+....+ ..++.|.+.++.+.++
T Consensus 228 ----~~~~~~r~GT~n~~~i~~l~~A~~~~~~--~~~~~~~~~~~L~~~l~~~L~~i~~~~i~-g~~~~r~p~~~~~~~~ 300 (382)
T TIGR03403 228 ----EHMGGRRSGTLNVPYIVAMGEAMRLANE--YLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIK 300 (382)
T ss_pred ----CCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCHHHCCCCEEEEECC
T ss_conf ----7747612798678899999999999999--89999999999999999999817794671-6833258857986279
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC-------------------CCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 73101137345678889999988862828726655676-------------------75056861588899999999999
Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA-------------------PLGLRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~-------------------~~~~RIg~~g~i~~~dv~~L~~a 374 (391)
.-. ...+...|.+.|+.+..|.+... ...+|+|.+-+.+.+||+.++++
T Consensus 301 ~i~------------~~~~~~~L~~~gI~v~~GsaCas~~~~~s~vl~a~g~~~~~~~~~vR~S~~~ynT~eeId~~i~~ 368 (382)
T TIGR03403 301 GVE------------GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEV 368 (382)
T ss_pred CCC------------HHHHHHHHCCCCEEEECHHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 989------------89999984709979975577289988758999971998544595799975899999999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780153|r 375 LRWVFYFQKI 384 (391)
Q Consensus 375 Le~~~~~~k~ 384 (391)
|+.+.++.|.
T Consensus 369 l~~~v~~lr~ 378 (382)
T TIGR03403 369 FKKAVQRLRA 378 (382)
T ss_pred HHHHHHHHHH
T ss_conf 9999999987
No 27
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.92 E-value=7.2e-22 Score=158.37 Aligned_cols=327 Identities=19% Similarity=0.142 Sum_probs=235.1
Q ss_pred CCCCHHHHHHHHHHHCCCC------CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC--CC--
Q ss_conf 7689689999863210365------328-988999999999999999688998579997487348999875320--57--
Q gi|254780153|r 21 CAKRPGWSLGILEGALLGR------SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL--LG-- 89 (391)
Q Consensus 21 ~~~~p~~v~~~~~~~~l~~------sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl--~~-- 89 (391)
|++.|+ |+++|...+-.. .|+ +.+..++++++++.+.+++++.. ++++| ++|||.+...++... ..
T Consensus 11 Tp~~~~-v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiF-TSG~TEsnNlaI~g~~~a~~~ 87 (386)
T COG1104 11 TPVDPE-VLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP-EEIIF-TSGATESNNLAIKGAALAYRN 87 (386)
T ss_pred CCCCHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEE-ECCCCHHHHHHHHHHHHHHHC
T ss_conf 889899-999999998753189611557579999999999999999839997-80899-569847777999864876423
Q ss_pred -CCCEEEEEE--CCHHHH-HHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----CCEEEEEEECCCCEEECCEEE--E
Q ss_conf -897079970--736888-88765323876306740577765786767855-----657997420242022032035--0
Q gi|254780153|r 90 -YRGVDVLAW--ESFGLG-WMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----RDVVFVWNGTTSGVCVPDVGF--I 158 (391)
Q Consensus 90 -~~~~~~~~~--g~~~~r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~v~~~h~ETstGv~~~~~~~--~ 158 (391)
++..+++++ ..-+-. -.+.. +..+.+|+.+.....-.+++++++.. ..|.+-|...-+|+..|+.++ +
T Consensus 88 ~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~v~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i 166 (386)
T COG1104 88 AQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEI 166 (386)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHH-HHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEEECCCCEEECCCHHHHHHH
T ss_conf 568985887554349999999999-8669757996888897287999998638884599998502682011209999999
Q ss_pred CCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 2568614886401101102545568--57999700120017665154456778887654114457783123200112321
Q gi|254780153|r 159 PESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 159 ~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
|++++++|-+|+++++|-.|+|.+. +|.+-+|++| |+||-|+|++++++.. +.... + ..
T Consensus 167 ~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~--~~~p~-----------i-----~G 227 (386)
T COG1104 167 CKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGV--RLEPL-----------I-----HG 227 (386)
T ss_pred HHHCCCEEEEEHHHHCCCEECCCCCCCCCEEEEEHHH-CCCCCCEEEEEECCCC--CCCCE-----------E-----EC
T ss_conf 9975981797613325760046021576568731121-3699842799987998--73744-----------6-----04
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 033478644666448899999999862010318999999997799999998747-9716766882003653178982473
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDS 315 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391)
-.++++--..|.++..|.++.++++...++ ++....|.....+.+.+.+... +..... .++..|.+-++.+.++.-
T Consensus 228 GgQE~g~RsGTenv~~Ivg~~~A~~~a~~~--~~~~~~~~~~lr~~l~~~l~~~~p~~~~~-g~~~~rlP~~~~~~f~gv 304 (386)
T COG1104 228 GGQERGLRSGTENVPGIVGFGKAAEIAVEE--LEEENARLRKLRDRLEDGLLEIIPDVYLN-GDDEPRLPNILNFSFPGV 304 (386)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CCCCCCCCCEEEEEECCC
T ss_conf 767899788875579999999999999987--78889999999999999998509968986-885457898689996897
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC-------------------CEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 1011373456788899999888628287266556767-------------------505686158889999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP-------------------LGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~-------------------~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
.. .-+.-.|..+|+.+..|.=++.+ ..+|+|.+-..+++||+++++++.
T Consensus 305 ~g------------E~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~ 372 (386)
T COG1104 305 EG------------ESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALK 372 (386)
T ss_pred CH------------HHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 57------------899986104086873364345899871499998099968837248997379998999999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999998
Q gi|254780153|r 377 WVFYFQKIS 385 (391)
Q Consensus 377 ~~~~~~k~~ 385 (391)
.++++.+..
T Consensus 373 ~~i~~lr~~ 381 (386)
T COG1104 373 EIIKRLREL 381 (386)
T ss_pred HHHHHHHHH
T ss_conf 999998630
No 28
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.92 E-value=1.2e-22 Score=163.29 Aligned_cols=297 Identities=15% Similarity=0.126 Sum_probs=206.6
Q ss_pred CCCCHHHHHHHHHHHCCC---C----CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC----
Q ss_conf 768968999986321036---5----328-9889999999999999996889985799974873489998753205----
Q gi|254780153|r 21 CAKRPGWSLGILEGALLG---R----SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---- 88 (391)
Q Consensus 21 ~~~~p~~v~~~~~~~~l~---~----sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---- 88 (391)
|+++|+ |+++|...+.+ . +|+ +.+..++++++++.+.++++...+ +++| ++|+|.++..++..+.
T Consensus 8 tp~~~~-v~~~~~~~~~~~~~Np~s~~h~~g~~a~~~le~aR~~ia~~lga~~~-eiiF-Tsg~Tes~nl~i~g~~~~~~ 84 (354)
T TIGR03235 8 TPVDPE-VAEVMLPFLLEEFGNPGSRTHEHGHNAKKAVERARKQVAEALGAQTK-EVIF-TSGATESNNIAILGLARAHE 84 (354)
T ss_pred CCCCHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEE-ECCHHHHHHHHHHHHHHHHH
T ss_conf 989999-99999999986687973031289999999999999999998099967-7899-68837999999999998502
Q ss_pred CCCCEEEEEECCH-HH-HHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE--EC
Q ss_conf 7897079970736-88-8887653238763067405777657867678-----55657997420242022032035--02
Q gi|254780153|r 89 GYRGVDVLAWESF-GL-GWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF--IP 159 (391)
Q Consensus 89 ~~~~~~~~~~g~~-~~-r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~--~~ 159 (391)
.+++.+++..-.. +. ...+.+++. +..+..+..+..-..+++++. ....|++.|....||+.+|+.++ ++
T Consensus 85 ~~g~~ii~s~~EH~svl~~~~~l~~~-G~~v~~~~vd~~G~id~~~l~~~l~~~t~lvsi~~~nnetG~i~pi~~i~~~~ 163 (354)
T TIGR03235 85 NKGKHIITTAIEHPAILEPARALERN-GFTVTYLEVDESGRVSVEELADAIRDDTLLVSIMHVNNETGSLQPIREIAELC 163 (354)
T ss_pred CCCCEEEECHHHHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 69999998100304479999999964-96899955578982877999987268977999988756667638899998865
Q ss_pred CCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf 56861488640110110254556--8579997001200176651544567788876541144577831232001123210
Q gi|254780153|r 160 ESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME 237 (391)
Q Consensus 160 ~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
+.+++++++|+++++|..|+|+. ++|.+.++++| |+||.|+|+++++++.+.+.. .. |.++ .-
T Consensus 164 ~~~g~~~~vDa~Q~~g~~~id~~~~~~D~~s~S~HK-~~GP~GiG~L~vr~~~~~~~~-l~-----Pl~~--------GG 228 (354)
T TIGR03235 164 EAREVFFHSDAAQVVGKITVDLERDHIDLISLSGHK-AYGPKGIGALYIRKRGKPKAP-LA-----PIMF--------GG 228 (354)
T ss_pred HCCCCEEEEECHHCCCCCCCCHHHHCCCEEEEECCC-CCCCCCEEEEEEECCCCCCCC-CC-----CEEC--------CC
T ss_conf 225641562500115875557788499737631000-348871499998046676666-46-----4036--------89
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 3347864466644889999999986201031899999999779999999874-797167668820036531789824731
Q gi|254780153|r 238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE-NDWIENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~-~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
.++++--..|+++..|.++.++++...+ +.+...++.++..+.+.+.+.. .+.... ..++..|++.++.|.+++-.
T Consensus 229 gqe~g~r~GT~nv~~i~g~~~A~~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~~v~i-~g~~~~r~p~i~s~~~~gi~ 305 (354)
T TIGR03235 229 GQERGLRPGTLPVPLIVGMGEAAEIARR--NAQAWGVRLRAMCNLLRDALQTSLPGVKL-NGDPAETLPNILSFSFEGVN 305 (354)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCCCCCCCCCEEEEEECCCC
T ss_conf 8868746899659999999999999998--28999999999999999999745996596-58822475888999979969
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC
Q ss_conf 011373456788899999888628287266556767
Q gi|254780153|r 317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP 352 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~ 352 (391)
. ..+...| ++++.+..|.+...+
T Consensus 306 ~------------~~l~~~L-~~~iavstGSACssg 328 (354)
T TIGR03235 306 P------------EALIRNL-KADAAVSTGSACTSS 328 (354)
T ss_pred H------------HHHHHHH-CCCCEEEHHHHCCCC
T ss_conf 9------------9999986-399899822420699
No 29
>KOG1549 consensus
Probab=99.80 E-value=1.1e-16 Score=125.36 Aligned_cols=339 Identities=17% Similarity=0.136 Sum_probs=201.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-H--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 98886888776896899998632103---653289-8--89999999999999996889985799974873489998753
Q gi|254780153|r 12 KRPFFSSGPCAKRPGWSLGILEGALL---GRSHRC-V--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW 85 (391)
Q Consensus 12 ~~~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~ 85 (391)
-+.|.++=+ +++|. |+++|..-++ +..|+- + +-...++++++.+.++++.... +|+| +.+||.+...++.
T Consensus 45 vyld~~at~-p~~~~-Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~-dIiF-ts~ATEs~Nlvl~ 120 (428)
T KOG1549 45 VYLDNQATG-PMDPR-VLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPS-DIVF-TSGATESNNLVLK 120 (428)
T ss_pred EEEECCCCC-CCCHH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEE-ECCCHHHHHHHHH
T ss_conf 797067678-99989-999999999985259985542023358999999999998489977-3799-4796078889998
Q ss_pred HCCC-CC---C-EEEEEECCHH-HH-HHHHHHHCCCCCEEEEECCCCCCCCHHHCC----C-CCCEEEEEEECCCCEEEC
Q ss_conf 2057-89---7-0799707368-88-887653238763067405777657867678----5-565799742024202203
Q gi|254780153|r 86 SLLG-YR---G-VDVLAWESFG-LG-WMSDIRQLSLQDVREFTAPYGSLPDFSKVD----F-DRDVVFVWNGTTSGVCVP 153 (391)
Q Consensus 86 nl~~-~~---~-~~~~~~g~~~-~r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~-~~~v~~~h~ETstGv~~~ 153 (391)
.+.. .+ + .++.....+. .. +.......+ .+++.+..+....++.+.+. . ...+.+-|...-.|+.+|
T Consensus 121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g-~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P 199 (428)
T KOG1549 121 GVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEG-LEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP 199 (428)
T ss_pred HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC-EEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCC
T ss_conf 72202456666369995045760048999998668-27999156865521189999753877439999700367421056
Q ss_pred CEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 2035--02568614886401101102545568--5799970012001766515445677888765411445778312320
Q gi|254780153|r 154 DVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 154 ~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
+.++ +|..+++.+.+|+..++|..|+|+.+ +|.+.++++|.+ +|||+++++++++ ...... .|. +
T Consensus 200 v~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~~----~~~~~~---~p~---~ 268 (428)
T KOG1549 200 VKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIY-GPPGIGALYVRRK----RPRLRV---EPP---L 268 (428)
T ss_pred HHHHHHHHCCCCCEEEEEHHHHCCCCCCCHHHCCCHHEEEECCCCC-CCCCCEEEEECCC----CCCCCC---CCC---C
T ss_conf 9999998574780798454543497441188858212464325302-7996069997468----876544---576---4
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHH-HHCCCC-CCCCCCCCCCCCC
Q ss_conf 011232103347864466644889999999986201031-8999999997799999998-747971-6766882003653
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG-LSACVERCNANAAVLFQFI-QENDWI-ENLAVDETTRSNT 306 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG-l~~~~~r~~~~a~~l~~~i-~~~~~~-~~~~~~~~~rS~~ 306 (391)
..-.+.++-...|+++..+.++..+++...++.+ .+++..| ....+...+ .+.... ........+-+.+
T Consensus 269 -----~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~ 340 (428)
T KOG1549 269 -----SGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLV 340 (428)
T ss_pred -----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH---HHHHHHHHHHHHCCHHHCCCCCCCCCCCCE
T ss_conf -----677430122057757413543688999987502125899999---999999887640735440478600046523
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHH-HH---------HHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 178982473101137345678889-99---------99888628287266556767505686158889999999999999
Q gi|254780153|r 307 SICMKIVDSDIASLDINSQKSFCK-SM---------LSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 307 ~v~~~~~d~~~~~~~~~~~~~~~~-~~---------~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
++-|....+.....+.. ..... +. .-.+...|.-.+. +-.++|||.+-+.+.+|++.|.+++.
T Consensus 341 ~~~~~~~~g~~~~~~~~--~~~l~s~~a~~~~~~epsy~l~~~G~~~~~-----~~~~iRis~G~y~t~~di~~~~~~i~ 413 (428)
T KOG1549 341 SLSFPYVEGESLLMDLK--DVALSSGSACTSASLEPSYVLRAIGVDEDL-----AHSSIRISIGRYTTEEDIDYLVDAIK 413 (428)
T ss_pred EEECCCCCCCCHHHHHH--HHHHCCCCHHHCCCCCCCHHHHHCCCCHHH-----HCCEEEEEEEEECCHHHHHHHHHHHH
T ss_conf 66025655720021010--444023305443888862116543742322-----11206986322076899999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780153|r 377 WVFYF 381 (391)
Q Consensus 377 ~~~~~ 381 (391)
..-..
T Consensus 414 ~~v~~ 418 (428)
T KOG1549 414 KLVSL 418 (428)
T ss_pred HHHHH
T ss_conf 99873
No 30
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=99.78 E-value=7.2e-16 Score=120.25 Aligned_cols=332 Identities=17% Similarity=0.131 Sum_probs=229.0
Q ss_pred CCC-CCCCCCCCHHHHHHHHHHHCC-------CCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC--HHHHHH
Q ss_conf 886-888776896899998632103-------653289-889999999999999996889985799974873--489998
Q gi|254780153|r 14 PFF-SSGPCAKRPGWSLGILEGALL-------GRSHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASD--TGAVEM 82 (391)
Q Consensus 14 ~~F-~pGP~~~~p~~v~~~~~~~~l-------~~sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~Gsg--T~~~ea 82 (391)
.+| +||=+.+ |..|++++...+. +.+|++ ....++++++++.+..|+|+....+|+|...-. +..|..
T Consensus 23 ~~~DnpAG~q~-Pq~V~dAv~~~L~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~G~~~T~L~~~ls~ 101 (410)
T TIGR01976 23 VFFDNPAGTQI-PQSVLDAVSAALTRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVFGANATSLAYLLSR 101 (410)
T ss_pred EEEECCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHH
T ss_conf 89757888877-73479999999874130137677663068999999999999997267988856767866899999999
Q ss_pred HHHHCCCCCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCC-CCHHHC-----CCCCCEEEEEEECCCCEEEC
Q ss_conf 7532057897079970---73688888765323876306740577765-786767-----85565799742024202203
Q gi|254780153|r 83 ALWSLLGYRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSL-PDFSKV-----DFDRDVVFVWNGTTSGVCVP 153 (391)
Q Consensus 83 ~~~nl~~~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~-----~~~~~v~~~h~ETstGv~~~ 153 (391)
++....++||.+++.. ..-=.-|.+.+.+.+ ..|.....+.-+. .+.+++ +....|+++.-..++|...+
T Consensus 102 a~~~~~~~GDEvivt~LDHeaNispW~~~a~~~G-a~Vkw~~~d~~~~~L~~~~L~~Lls~rTRLVAvt~ASn~~Gs~~d 180 (410)
T TIGR01976 102 ALSRRWGPGDEVIVTRLDHEANISPWLQAAEDAG-AKVKWARVDEADGELHPDDLASLLSPRTRLVAVTAASNLLGSIVD 180 (410)
T ss_pred HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
T ss_conf 9851268985589716766001368999998389-789996336231544869982366882255562344023255115
Q ss_pred CEEE--ECCCCCCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 2035--02568614886401101102545--5685799970012001766515445677888765411445778312320
Q gi|254780153|r 154 DVGF--IPESREGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 154 ~~~~--~~~~~~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
+..+ +.|..|+.++||||......=+| .|++|+++.|+-|.| ||+ +|+++++++.++.+..-+.... .
T Consensus 181 l~A~~~~vh~aGA~v~VDaVhyaPH~L~Dvqa~gaD~l~cSaYK~f-GPH-~G~l~~R~~~~~~l~~~k~~~~------~ 252 (410)
T TIGR01976 181 LAALTELVHAAGALVYVDAVHYAPHGLIDVQALGADFLVCSAYKFF-GPH-LGILWGRPELLKSLPPYKLEFS------E 252 (410)
T ss_pred HHHHHHHHHHCCCEEEECHHHHCCCCCCCHHHHCCCEEEECCEECC-CCC-EEEEEECHHHHCCCCCCCCCCC------C
T ss_conf 8899999987598798811100456664134227887998563116-885-0178711466404687633677------8
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----C-------------HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 01123210334786446664488999999998620103----1-------------899999999779999999874797
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG----G-------------LSACVERCNANAAVLFQFIQENDW 292 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g----G-------------l~~~~~r~~~~a~~l~~~i~~~~~ 292 (391)
+-...+.+ ..||.--++.++..+++++.+-| + .+...+.-+..++.+-+.|...++
T Consensus 253 ----d~~P~r~E---~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~~~Ll~~L~~~P~ 325 (410)
T TIGR01976 253 ----DTGPERFE---LGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLAERLLAGLSDLPG 325 (410)
T ss_pred ----CCCCCEEE---ECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf ----88885145---14556026789999999999823210689886558999999999999999999999999874895
Q ss_pred CCCCCC---C-CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-C-----CCC-----CCEEEE
Q ss_conf 167668---8-200365317898247310113734567888999998886282872665-5-----676-----750568
Q gi|254780153|r 293 IENLAV---D-ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-Y-----RDA-----PLGLRV 357 (391)
Q Consensus 293 ~~~~~~---~-~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~-----r~~-----~~~~RI 357 (391)
...+-. + .+.|-+ +++|.+.+-. ...+++.|.++|+.+--|+ | |.. +..+||
T Consensus 326 ~t~yG~~d~~R~~~RvP-Tv~F~v~~~~------------P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~~GvvR~ 392 (410)
T TIGR01976 326 VTVYGVQDEKRLAERVP-TVAFTVAGLS------------PQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEADGGVVRV 392 (410)
T ss_pred EEEECHHHHHHHHHCCC-EEEEEECCCC------------HHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCEEEE
T ss_conf 69973557864642597-5889727878------------7999999853686331264116899986589898873898
Q ss_pred ECCCCCCHHHHHHHHHHH
Q ss_conf 615888999999999999
Q gi|254780153|r 358 WVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 358 g~~g~i~~~dv~~L~~aL 375 (391)
|+.++.+.|||+.|+++|
T Consensus 393 gLaHY~t~eevd~l~~aL 410 (410)
T TIGR01976 393 GLAHYNTAEEVDRLLEAL 410 (410)
T ss_pred EECCCCCHHHHHHHHHCC
T ss_conf 525779889999998509
No 31
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.74 E-value=4.7e-17 Score=127.77 Aligned_cols=154 Identities=27% Similarity=0.260 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCC--
Q ss_conf 999999999996889985799974873489998753205789707997073688888765323876306740577765--
Q gi|254780153|r 50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSL-- 127 (391)
Q Consensus 50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~-- 127 (391)
++++++.++++++++.+ .++| ++|||.++++++.+++++|+.+++....|+......+ ...+..+..+..+....
T Consensus 2 ~~e~e~~la~~~~~~~~-~~i~-~~sgt~A~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~-~~~g~~~~~~~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGND-KAVF-VPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAA-ELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHHCCCCC-EEEE-ECHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH-HHCCCEEEEECCCCCCCCC
T ss_conf 89999999998489989-8999-5669999999999972799999982684375689999-8659877872347787554
Q ss_pred CCHHHC------CCCCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCC-----CCCCCCEEEEECCHHC
Q ss_conf 786767------855657997420242022032035--025686148864011011025-----4556857999700120
Q gi|254780153|r 128 PDFSKV------DFDRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARH-----IDFNKLDVVTFSAQKV 194 (391)
Q Consensus 128 ~~~~~~------~~~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p-----~d~~~iDv~~a~sQK~ 194 (391)
.+.... +..+.++++|.++++|+..|..++ +|+++++++++|+++++|+.+ .+.+++|++.+++||+
T Consensus 79 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~l~~I~~la~~~gi~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~hK~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred CCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf 68999999855999636887740147873201999973562079699994684321606666677778985999898666
Q ss_pred CCCCCCCEEEEEC
Q ss_conf 0176651544567
Q gi|254780153|r 195 LGGEAGFGIIILS 207 (391)
Q Consensus 195 l~~ppGl~~v~~s 207 (391)
|+ |||.|+++++
T Consensus 159 lg-~~g~g~l~~~ 170 (170)
T cd01494 159 LG-GEGGGVVIVK 170 (170)
T ss_pred CC-CCCEEEEEEC
T ss_conf 78-9857999989
No 32
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.64 E-value=8.5e-13 Score=100.73 Aligned_cols=303 Identities=17% Similarity=0.099 Sum_probs=188.3
Q ss_pred CHHHHHHHHHHHCC--CCC---CCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 96899998632103--653---2898-89999999999999996889985799974873489998753205789707997
Q gi|254780153|r 24 RPGWSLGILEGALL--GRS---HRCV-LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l--~~s---HRs~-~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
+|+ +.++..+.+- |.+ .|.- --.+++.++.+.|.++++.++ ++++ .||+.+.-+++..+.++++.++..
T Consensus 17 ~p~-~~~a~~~a~~~~G~g~~~sr~~~G~~~~~~~lE~~la~~~g~e~---al~~-~sG~~an~~~i~~l~~~~d~i~~D 91 (349)
T cd06454 17 HPE-VIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA---ALVF-SSGYAANDGVLSTLAGKGDLIISD 91 (349)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE---EEEE-CCHHHHHHHHHHHCCCCCCEEEEC
T ss_conf 999-99999999997399888767364787999999999999869981---9995-570787788886205789779741
Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-C----CCCCEEEEEEE---CCCCEEECCEEE--ECCCCCCEEE
Q ss_conf 073688888765323876306740577765786767-8----55657997420---242022032035--0256861488
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-D----FDRDVVFVWNG---TTSGVCVPDVGF--IPESREGLVI 167 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~----~~~~v~~~h~E---TstGv~~~~~~~--~~~~~~~lli 167 (391)
...... ..+..+..+..+.. .+.....++++. + ..... ++-.| +..|-..|..++ +++++++.++
T Consensus 92 ~~~H~s--i~~G~~~s~a~~~~--f~Hnd~~~L~~~l~~~~~~~~~~-~iv~egv~Sm~Gd~apL~~l~~l~~~~~~~li 166 (349)
T cd06454 92 SLNHAS--IIDGIRLSGAKKRI--FKHNDMEDLEKLLREARRPYGKK-LIVTEGVYSMDGDIAPLPELVDLAKKYGAILF 166 (349)
T ss_pred CCCCHH--HHHHHHCCCCCEEE--ECCCCHHHHHHHHHHHHCCCCCE-EEEECCCCCCCCCCCCHHHHHHHHHHHCCEEE
T ss_conf 534372--88636524464799--78999999999998532258976-99965767888776798999999998297899
Q ss_pred EEECCHHHHC--------C--CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf 6401101102--------5--45568579997001200176651544567788876541144577831232001123210
Q gi|254780153|r 168 CDATSAVFAR--------H--IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME 237 (391)
Q Consensus 168 vD~vSs~g~~--------p--~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
||-.-++|.. . ....++|++.++-.|+||+..| ++..+++..+.......+ .
T Consensus 167 vDeAH~~Gv~G~~G~G~~~~~~~~~~~di~~~tlsKa~G~~Gg--~v~g~~~~i~~l~~~~~~----~------------ 228 (349)
T cd06454 167 VDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVGG--YIAGSKELIDYLRSYARG----F------------ 228 (349)
T ss_pred EECHHHCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCC--EEECCHHHHHHHHHHCCC----C------------
T ss_conf 7232331741588876788658988667998536543467771--242535689999861988----5------------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 33478644666448899999999862010318999999997799999998747971676688200365317898247310
Q gi|254780153|r 238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317 (391)
Q Consensus 238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~ 317 (391)
-.++ ++|...+.+...+|+.+.+ -..+.++-+++.+.+++.+.+.+ +.. . .. .+..++.+...++
T Consensus 229 ---i~s~--~l~p~~~aa~~~al~~l~~---~~~~~~~L~~~~~~~~~~l~~~g-~~i-~--~~-~~~~i~~~~~~~~-- 293 (349)
T cd06454 229 ---IFST--SLPPAVAAAALAALEVLQG---GPERRERLQENVRYLRRGLKELG-FPV-G--GS-PSHIIPPLIGDDP-- 293 (349)
T ss_pred ---CCCC--CCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHCC-CCC-C--CC-CCCCEEEEECCCH--
T ss_conf ---7777--7689999999999999863---95889999999999999999769-975-7--99-9972799986999--
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 1137345678889999988862828726655676750---568615888999999999999999
Q gi|254780153|r 318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
.....+...|.++|+.+..-.|..++++ +||......+++||+.|+++|+.+
T Consensus 294 ---------~~a~~~~~~L~~~Gi~v~~~~~Ptvp~~~~~lRi~~sa~ht~edId~li~~l~ev 348 (349)
T cd06454 294 ---------AKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ---------HHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf ---------9999999999887962863798978999835999868779999999999999974
No 33
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.60 E-value=1.4e-11 Score=93.02 Aligned_cols=306 Identities=14% Similarity=0.046 Sum_probs=193.7
Q ss_pred CCHHHHHHHHHHHC--CCCCCCCHH----HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE
Q ss_conf 89689999863210--365328988----999999999999999688998579997487348999875320578970799
Q gi|254780153|r 23 KRPGWSLGILEGAL--LGRSHRCVL----GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL 96 (391)
Q Consensus 23 ~~p~~v~~~~~~~~--l~~sHRs~~----f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~ 96 (391)
.+|+ +.++....+ .|.+.-++. ...++.++.+.|.++++.++ ++++ .||..+.-+++..|.++++.++.
T Consensus 54 ~hp~-v~~a~~~a~~~yG~g~~~SRl~~G~~~~h~~LE~~lA~~~g~e~---allf-~SGy~An~~~i~al~~~~d~ii~ 128 (387)
T PRK05958 54 NHPE-LIAAAQQAARRYGVGSGGSRLVTGNSPAHEALEAELAEWFGAER---ALLF-SSGYAANLAVLTALVGKGDLIVS 128 (387)
T ss_pred CCHH-HHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCC---EEEE-CCCHHHHHHHHHHCCCCCCEEEE
T ss_conf 9999-99999999998389886563230686999999999999868996---7964-55238666566532789978997
Q ss_pred EE-CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCC-CCEEEEEEECC---CCEEECCEE--EECCCCCCEEEE
Q ss_conf 70-73688888765323876306740577765786767-855-65799742024---202203203--502568614886
Q gi|254780153|r 97 AW-ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFD-RDVVFVWNGTT---SGVCVPDVG--FIPESREGLVIC 168 (391)
Q Consensus 97 ~~-g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~v~~~h~ETs---tGv~~~~~~--~~~~~~~~lliv 168 (391)
.- .+++- .+..+..+..+. ........+++.. +.. ..-.++-.|+. .|-..|..+ .+++.+++.++|
T Consensus 129 D~~~HaSi---~dG~~ls~a~~~--~f~HnD~~~Le~~L~~~~~~~~~iv~egvySMdGd~apL~~i~~L~~~y~~~L~v 203 (387)
T PRK05958 129 DKLNHASL---IDGARLSRAEVR--RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLV 203 (387)
T ss_pred ECCCCHHH---HHHHHHCCCCEE--EECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEE
T ss_conf 10046989---998872799289--9689999999999973889875999746657788766899999999970847884
Q ss_pred EECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf 401101102---------545-5685799970012001766515445677888765411445778312320011232103
Q gi|254780153|r 169 DATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391)
Q Consensus 169 D~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
|-.=++|.. .++ ..++|++.++-.|+||+..| +|+.|++.++...... +.+
T Consensus 204 DeAH~~Gv~G~~G~G~~e~~~~~~~vdi~~gTlsKA~gs~GG--~i~g~~~~i~~l~~~a-~~~---------------- 264 (387)
T PRK05958 204 DEAHGTGVLGPQGRGLAEAAGLAGEIVILVGTLGKALGSSGA--AVLGSETLIDYLINRA-RPF---------------- 264 (387)
T ss_pred CCHHHCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCE--EEEECHHHHHHHHHHC-CCC----------------
T ss_conf 262222633799984899847888868997605444567743--9950789999998739-020----------------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 34786446664488999999998620103189999999977999999987479716766882003653178982473101
Q gi|254780153|r 239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391)
Q Consensus 239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391)
-.++ .+|-..+.+...+|+.+.++ +.+.++-+++.+.+++.+...++ .. ....|+ ++++.+.++.
T Consensus 265 --ifSt--alpP~~~aa~~~al~~i~~~---~~~~~~L~~n~~~~~~~l~~~g~-~~----~~s~sp-Iipi~ig~~~-- 329 (387)
T PRK05958 265 --IFTT--ALPPAQAAAARAALRILREE---PERRERLAALIARLRAGLRALGL-GL----PDSESA-IQPLIVGDNE-- 329 (387)
T ss_pred --CCCC--CCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC----CCCCCC-EEEEEECCHH--
T ss_conf --3158--88779999999999998609---59999999999999864575399-85----899998-7999969999--
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 137345678889999988862828726655676750---568615888999999999999999999
Q gi|254780153|r 319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
....+.+.|.++|+.+..-.|+.++++ +||......+++||+.|+++|+++..+
T Consensus 330 ---------~~~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~i~a~ht~~dId~l~~~l~e~~~~ 386 (387)
T PRK05958 330 ---------RALALAAALQAQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEALAA 386 (387)
T ss_pred ---------HHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf ---------999999999977952831789988999844999978779999999999999999950
No 34
>PRK10534 L-threonine aldolase; Provisional
Probab=99.53 E-value=2e-11 Score=91.98 Aligned_cols=299 Identities=16% Similarity=0.149 Sum_probs=178.1
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 88776896899998632103653289889999999999999996889985799974873489998753205789707997
Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
.+|| |+ ++++|..+-.| +-..-=....++..+.+.++|+.+. .+|++ |||.+.-.+++.+..+++.+++.
T Consensus 10 t~p~---~~-m~~Am~~A~~G--ddvYgeDptv~~Le~~~A~l~G~ea---alFvp-sGTmaN~iAl~~~~~~g~~vi~~ 79 (333)
T PRK10534 10 TRPS---RA-MLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSGKEA---ALFLP-TGTQANLVALLSHCERGEEYIVG 79 (333)
T ss_pred CCCC---HH-HHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCE---EEEEC-CCCHHHHHHHHHHCCCCCEEEEC
T ss_conf 9999---99-99999737557--7545769899999999999858971---89957-87578999999847899869875
Q ss_pred ECCHHH-HHHHHHHHCCCCCEEEEEC-CCCCCCCHHHCC----C------CCCEEEEEEECCCCEEECCEEE-----ECC
Q ss_conf 073688-8887653238763067405-777657867678----5------5657997420242022032035-----025
Q gi|254780153|r 98 WESFGL-GWMSDIRQLSLQDVREFTA-PYGSLPDFSKVD----F------DRDVVFVWNGTTSGVCVPDVGF-----IPE 160 (391)
Q Consensus 98 ~g~~~~-r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~----~------~~~v~~~h~ETstGv~~~~~~~-----~~~ 160 (391)
....-. .-..-.+..++.....+.. ..|.. +++++. . ...+....| |..|..+|..++ .|+
T Consensus 80 ~~sHI~~~E~Gg~a~l~g~~~~~i~~~~~g~~-~~~~v~~~i~~~~~h~~~~~lv~len-T~~G~v~p~~el~~i~~~a~ 157 (333)
T PRK10534 80 QAAHNYLYEAGGAAVLGSIQPQPIDAAADGTL-PLDKVAAKIKPDDIHFARTRLLSLEN-THNGKVLPREYLKEAWEFTR 157 (333)
T ss_pred CCCCCHHCCCCCHHHHCCCCEEEECCCCCCCC-CHHHHHHHCCCCCCCCCCEEEEEEEE-CCCCEECCHHHHHHHHHHHH
T ss_conf 77761011466489876952155147889824-89999986187887667624665540-35885368999999999999
Q ss_pred CCCCEEEEEEC------CHHHHCCCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 68614886401------1011025455-6857999700120017665154456778887654114457783123200112
Q gi|254780153|r 161 SREGLVICDAT------SAVFARHIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 161 ~~~~llivD~v------Ss~g~~p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
.++..+-.|+- .+.|.-|-++ +.+|.++.+--|+||+|-| ++++.+++.+++........
T Consensus 158 ~~gl~vHlDGARl~NA~~a~g~~~~e~~~~~Dsvs~clsKgLGap~G-svl~g~~~~i~~a~~~RK~~------------ 224 (333)
T PRK10534 158 ERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVG-SLLVGNRDYIKRAIRWRKMT------------ 224 (333)
T ss_pred HCCCEEEECHHHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCCCC-EEEECCHHHHHHHHHHHHHH------------
T ss_conf 75983762327776446542999999997589889874067887332-14646899999999999985------------
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 32103347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391)
-|.+.. . .+.+ ...+. .+++ .++...+.|+ +++.+.+.+...+ .... .+ -+|+.|...
T Consensus 225 -------GGgmrQ---~-g~lA-Aa~l~-aL~~-~~~rl~~dH~-nA~~La~~L~~~g-~~~~--~~----eTN~vf~~~ 282 (333)
T PRK10534 225 -------GGGMRQ---A-GILA-AAGLY-ALKH-NVARLQEDHD-NAAWLAQQLREAG-ADVM--RQ----DTNMLFVRV 282 (333)
T ss_pred -------CCHHHH---H-HHHH-HHHHH-HHHC-CHHHHHHHHH-HHHHHHHHHHHCC-CCCC--CC----CCCEEEEEC
T ss_conf -------465558---9-9999-99999-9963-9998999999-8999999999769-8748--99----764799977
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
++. ....+...+.+.|+.+.. ++.+|+=+--.++++||+++++++...++
T Consensus 283 ~~~-----------~~~~l~~~~~~~gv~~~~------~~~vR~Vth~~it~~dv~~~i~~~r~~l~ 332 (333)
T PRK10534 283 GEE-----------NAAALGEYMRERNVLINA------SPIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CHH-----------HHHHHHHHHHHCCEEECC------CCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 877-----------799999999987967579------98189998089999999999999999971
No 35
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.53 E-value=2.6e-11 Score=91.29 Aligned_cols=306 Identities=16% Similarity=0.068 Sum_probs=184.6
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 88776896899998632103653289889999999999999996889985799974873489998753205789707997
Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
.|| +|+ ++++|..+-.| |-..-.....+++.+.++++|+-. .++|++ |||.+.-.++..++.+++.+++.
T Consensus 8 t~p---~p~-m~~A~~~A~~g--d~~yg~D~~~~~le~~~a~l~g~e---aa~f~~-sGT~aN~~al~~~~~~~~~vi~~ 77 (338)
T cd06502 8 TGP---TPE-MLEAMAAANVG--DDVYGEDPTTAKLEARAAELFGKE---AALFVP-SGTAANQLALAAHTQPGGSVICH 77 (338)
T ss_pred CCC---CHH-HHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHCCC---EEEEEC-CCCHHHHHHHHHHCCCCCEEEEE
T ss_conf 889---999-99999806367--866678989999999999984898---299807-84189999999856999758850
Q ss_pred E-CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----------CCEEEEEEECCCCEEECCEEE-----ECC
Q ss_conf 0-73688888765323876306740577765786767855-----------657997420242022032035-----025
Q gi|254780153|r 98 W-ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----------RDVVFVWNGTTSGVCVPDVGF-----IPE 160 (391)
Q Consensus 98 ~-g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~v~~~h~ETstGv~~~~~~~-----~~~ 160 (391)
. .+....-..-.....+..+..+..+.|. .++++++.. ..+..+-|-|.-|...|..++ +|+
T Consensus 78 ~~aHi~~~E~g~~~~~~G~~~~~~~~~~g~-l~~~~i~~~i~~~~~~h~~~~~lv~ient~e~G~v~~~~el~~i~~~a~ 156 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGENGK-LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAK 156 (338)
T ss_pred CCCCEEEECCCCHHHHCCCEEEEEECCCCC-CCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHH
T ss_conf 467145653773998749625643389997-3899999963156886466520799873128963127999999999999
Q ss_pred CCCCEEEEEEC------CHHHHCCCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 68614886401------1011025455-6857999700120017665154456778887654114457783123200112
Q gi|254780153|r 161 SREGLVICDAT------SAVFARHIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 161 ~~~~llivD~v------Ss~g~~p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
+++..+-+|+- -+.+.-+.++ ..+|.++.+.-|+++. |+=++++.+++.+++.......
T Consensus 157 ~~gl~lH~DGARl~nA~~a~g~~~~~~~~~~Dsvs~~~sKglga-p~gavl~g~~~~i~~a~~~rK~------------- 222 (338)
T cd06502 157 ENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGA-PVGAVVVGNRDFIARARRRRKQ------------- 222 (338)
T ss_pred HCCCEEEECCCCEECEEECCCCCHHHHHHHCCEEEEECCCCCCC-CCCEEEECCHHHHHHHHHHHHH-------------
T ss_conf 74972665365300445415999899864187899966566777-4324787788999999999986-------------
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 32103347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391)
.|+.. --...+. ...+..++ ...+-.+.++..++++.+.+.+++.++... ... +|+.+..+
T Consensus 223 -------~Gg~m--rq~g~lA--Aa~~~~L~-~~~~~~~l~~dh~~A~~La~~l~~~~~~~~-----~~e--tniv~~~~ 283 (338)
T cd06502 223 -------AGGGM--RQSGFLA--AAGLAALE-NDLWLRRLRHDHEMARRLAEALEELGGLES-----EVQ--TNIVLLDP 283 (338)
T ss_pred -------HCCCH--HHHHHHH--HHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCC--CCEEEEEC
T ss_conf -------47536--4599999--99999985-483789999999999999999986799766-----665--77589832
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 7310113734567888999998886282872665567675056861588899999999999999
Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
...... +.. .......+.++|+.+..-+ +..+|+=+.-.++.+||+.+++.|+.
T Consensus 284 ~~~n~~-~~~-----~~~~~~~~~~~g~~~~~~~----~~~vR~Vt~~~~t~~dvd~~i~~ik~ 337 (338)
T cd06502 284 VEANAV-FVE-----LSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CCCCHH-HHH-----HHHHHHHHHHCCEEEEECC----CCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 754188-987-----4699999996896999469----99289998899999999999999962
No 36
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.52 E-value=5.5e-11 Score=89.21 Aligned_cols=326 Identities=15% Similarity=0.088 Sum_probs=198.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-
Q ss_conf 88688877689689999863210365----3289889999999999999996889985799974873489998753205-
Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL- 88 (391)
Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~- 88 (391)
-+|+...+.-+|. ..+++. .++.. .--.|...++-+++.+-+.++|+.|+..- .++.|||.+.-.++...-
T Consensus 27 ~~~~~~~~~~~~~-a~~a~~-~~~~~N~~~~~~~P~~~~mE~~vv~~~a~l~g~p~~~G--~~tsGGTes~l~Al~aaR~ 102 (375)
T PRK13520 27 RILSSMCTKPHPI-AREAHE-MFLETNLGDPGLFPGTAKLEREVVRMLGELLHLPDAYG--YITSGGTEANIQAVRAARN 102 (375)
T ss_pred HEEEEEECCCHHH-HHHHHH-HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE--EEECHHHHHHHHHHHHHHH
T ss_conf 7347764783499-999999-99961789853387799999999999999809998808--9956189999999999976
Q ss_pred --CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC----CC-EEEEEEECCCCEEECCEEE--EC
Q ss_conf --789707997073688888765323876306740577765786767855----65-7997420242022032035--02
Q gi|254780153|r 89 --GYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD----RD-VVFVWNGTTSGVCVPDVGF--IP 159 (391)
Q Consensus 89 --~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~-v~~~h~ETstGv~~~~~~~--~~ 159 (391)
..+.-.+++. .=.+-....++++-+.++..+........++++++.. .. +..+-..|.+|..=|+.++ +|
T Consensus 103 ~~~~~~p~iv~~-~~aH~s~~Kaa~~~gi~~~~vp~d~~~~~d~~~l~~~i~~~ti~vvatagtt~~G~iDpi~~i~~i~ 181 (375)
T PRK13520 103 LADAEKPNIVVP-ESAHFSFDKAADMLGLELRRAPLDEDYRVDVKSVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIA 181 (375)
T ss_pred HCCCCCCEEEEE-CCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCHHHHHHHH
T ss_conf 268999879996-7316999999997495569940388886989999998864957999925887882235999999999
Q ss_pred CCCCCEEEEEECCHHHHCC-------CCC--CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf 5686148864011011025-------455--6857999700120017665154456778887654114457783123200
Q gi|254780153|r 160 ESREGLVICDATSAVFARH-------IDF--NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV 230 (391)
Q Consensus 160 ~~~~~llivD~vSs~g~~p-------~d~--~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~ 230 (391)
.+++..+=||+...-...| +|+ .++|-+....+|-+..|.|.|++.++++.+-+... ... .|+.
T Consensus 182 ~~~~i~lHVDaa~GGf~~pf~~~~~~~df~l~~vdSIs~d~HK~g~~p~g~g~vl~r~~~~~~~~~--~~~---~Yl~-- 254 (375)
T PRK13520 182 LENDIFLHVDAAFGGFVIPFLDDPYDFDFSLPGVSSITIDPHKMGLAPIPAGGILFRDPEFLDALD--VDT---PYLT-- 254 (375)
T ss_pred HHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHC--CCC---HHHC--
T ss_conf 975974998625520221125766400047788026424611136515771599987889998724--677---1435--
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 11232103347864466644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391)
Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391)
.........|-|-+.+..+-.+|..+=. .|...+.+++.+.++.+.+.|++.+ ++... +|. ..+++|
T Consensus 255 -------~~~~~tl~gSR~g~~~~~~Wa~l~~~G~-~Gy~~~~~~~~~~a~~la~~l~~~g-~e~~~-~P~---~~iV~F 321 (375)
T PRK13520 255 -------SKKQATLTGTRSGAGVAATYAVMKYLGR-EGYRKVVERCMENTRYLVEELEKLG-FEPVI-EPV---LNIVAF 321 (375)
T ss_pred -------CCCCEEEECCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC-CEEEC-CCC---CEEEEE
T ss_conf -------8987356058877559999999999739-9999999999999999999998679-98970-898---139999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 82473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
+.++. ..+...+.+.|..+.. ++ .+.++||-+++.++.+-++.+++-|+++.++
T Consensus 322 r~~~~--------------~~l~d~l~~~GW~v~~--~~-~P~~lhivv~~~~~~~~id~fl~DL~e~~~~ 375 (375)
T PRK13520 322 DDPNP--------------HEVRKKLRERGWRVSV--TR-CPEALRIVVMPHVTREHIEAFLEDLDEVKKR 375 (375)
T ss_pred ECCCH--------------HHHHHHHHHCCCEECC--CC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 57999--------------9999999976987457--88-9984899995999989999999999999529
No 37
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.51 E-value=1.2e-10 Score=87.06 Aligned_cols=328 Identities=14% Similarity=0.146 Sum_probs=187.8
Q ss_pred CCCCCCCCCCCCCC-CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 89988868887768-96899998632103653-28988999999999999999688998579997487348999875320
Q gi|254780153|r 10 KPKRPFFSSGPCAK-RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL 87 (391)
Q Consensus 10 ~p~~~~F~pGP~~~-~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl 87 (391)
+|+-++++.|=... +|..|++++.+.+-.-. ||-++-. -+.+.++.+.+.++.+.+.+|++ +.|++.++..++..+
T Consensus 21 ~~diI~L~~~e~~~~~p~~v~~a~~~~~~~~~~~~Y~~~~-g~~~Lr~aia~~~~~~~~~ei~v-t~G~~~~l~~~~~a~ 98 (375)
T PRK06225 21 KPELIWLGQNTNHLHPHPEVRDAMIRAAKEGEYNKYAPPE-GFEELRELILADLGLDDDFDALV-TAGATESLYLVIRAF 98 (375)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHHHHCCCCCCEEEE-CCCHHHHHHHHHHHH
T ss_conf 9990689999899885799999999996489878879963-58999999999868899974998-278899999999997
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE---ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE--
Q ss_conf 578970799707368888876532387630674---05777657867678-----55657997420242022032035--
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF---TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF-- 157 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~-- 157 (391)
+++||.+++..=.|.. ...+.+..+..+..+ ....+...+++.+. ..+.+.++.=..-||...+..+.
T Consensus 99 ~~pGD~vl~~~P~y~~--y~~~~~~~g~~~~~vpl~~~~~~~~~d~d~l~~~i~~~tk~i~l~nPnNPTG~v~s~~~l~~ 176 (375)
T PRK06225 99 LSPGTNTVTSDPGYKI--IDNFANRFGAEVIEVPIYSEECDYKLTPEALKENVDEETKLIVLIDPLNPLGSSYTREEIKE 176 (375)
T ss_pred CCCCCEEEECCCCCHH--HHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHH
T ss_conf 7998989984898335--99999984990574576685468878999999628888828998299899888788999999
Q ss_pred ---ECCCCCCEEEEEEC-CHHHHC-CC--CCC-CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf ---02568614886401-101102-54--556-857999700120017665--154456778887654114457783123
Q gi|254780153|r 158 ---IPESREGLVICDAT-SAVFAR-HI--DFN-KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIF 227 (391)
Q Consensus 158 ---~~~~~~~llivD~v-Ss~g~~-p~--d~~-~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~ 227 (391)
+|..++.++|.|-+ +.+... +. ... +-.+++.|.-|.++ .|| +|.++.+++.+++......
T Consensus 177 l~~~a~~~~i~ii~DE~Y~~f~~~~~~~~~~~~~~~iv~~S~SK~~~-~~G~RiG~~i~~~~~i~~l~~~~~-------- 247 (375)
T PRK06225 177 FAEIARDNDAYLVHDCTYRDFAREHTLAAEYAPEGTVTIYSFSKIFG-LAGLRIGAVVAAPDLLEQVAKYVV-------- 247 (375)
T ss_pred HHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHCCCCEEEECCCCHHCC-CHHHHHHHHCCCHHHHHHHHHHHC--------
T ss_conf 99999862770000221332067887234537787599823605135-734405141079999999998743--------
Q ss_pred HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf 20011232103347864466644889999999986201031899999999779999999874797167668820036531
Q gi|254780153|r 228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTS 307 (391)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~ 307 (391)
+ ...+++..-++...+|+.- ..-++.+.+...++.+.+.+.++...+...-+ .| +.++
T Consensus 248 ---------------~-~~~~~~~~q~aa~aal~~~--~~~~~~~~~~~~~~r~~~~~~l~~l~g~~~~~-~p---~~g~ 305 (375)
T PRK06225 248 ---------------S-DLGANVIAQEAAIAGLKVK--SEWIERIRREDFRNQALIKEAVDEIEGVFLPV-YP---SHAN 305 (375)
T ss_pred ---------------C-CCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE-EC---CCCE
T ss_conf ---------------8-7887899999999998489--99999999999999999999985373885167-07---9745
Q ss_pred EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC--CCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78-982473101137345678889999988862828726655--676750-56861588899999999999999999999
Q gi|254780153|r 308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY--RDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
.. +.+.+... ....+...|.++|+++..|.+ ...|.+ +||+.. .+.++++..++.|+.+.+++|
T Consensus 306 f~~~~~~~~g~----------~~~~~~~~l~e~gV~v~pG~~~~~~~g~~~iRis~~--~~~e~l~~a~~rl~~~l~~lr 373 (375)
T PRK06225 306 MLVIDTSEAGI----------RPEDLVEYLLERKIFVRQGTYTSKRFGDRFIRVSFS--IPREWVERFCEEFPDVVATLR 373 (375)
T ss_pred EEEEECCCCCC----------CHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHHH
T ss_conf 99998668898----------999999999978909968986788789992999970--489999999999999999864
Q ss_pred H
Q ss_conf 9
Q gi|254780153|r 384 I 384 (391)
Q Consensus 384 ~ 384 (391)
-
T Consensus 374 ~ 374 (375)
T PRK06225 374 K 374 (375)
T ss_pred C
T ss_conf 5
No 38
>pfam00155 Aminotran_1_2 Aminotransferase class I and II.
Probab=99.50 E-value=3.4e-10 Score=84.18 Aligned_cols=304 Identities=16% Similarity=0.120 Sum_probs=166.4
Q ss_pred CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHH----CCCCCC-EEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 96899998632103653-289889999999999999996----889985-799974873489998753205789707997
Q gi|254780153|r 24 RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVL----EVPENY-RIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~----~~p~~y-~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
+|. |++++.++.-+-+ |. ..-.+-..+.++.+.+++ +.+-+. ..+++++|++.++..++.-++++|+.+++.
T Consensus 16 ~p~-v~~A~~~a~~~~~~~~-Y~~~~G~~~LR~aia~~~~~~~~~~~~~e~~I~~t~G~~~~l~~~~~~l~~~gd~Vli~ 93 (351)
T pfam00155 16 LPA-VAKAEKDALAGGTRNL-YGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGAGANIEALIFLLANPGDAILVP 93 (351)
T ss_pred CHH-HHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 899-9999999974999980-79818789999999998601029999947489981139999999999966994999988
Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCE
Q ss_conf 073688888765323876306740--57776578676785-----565799742024202203203-----502568614
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGL 165 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~l 165 (391)
.=.|..- ....+..+..+..+. ...+...++++++. .+.+.++.-..-||...+..+ .++..++.+
T Consensus 94 ~P~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPTG~~~~~~~l~~l~~~a~~~~~~ 171 (351)
T pfam00155 94 APTYASY--IRIARLAGGEVVRYPLYDSNDFHLDFDALEAALKEKPKVVLHESPHNPTGTVAPLEELEKLLDLAKEHNIL 171 (351)
T ss_pred CCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 9986889--99999839977898456434779899999975415986999889919877776889999998653028889
Q ss_pred EEEEECCHHHHC---C-CC-----CCC-CEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 886401101102---5-45-----568-579997001200176651--54456778887654114457783123200112
Q gi|254780153|r 166 VICDATSAVFAR---H-ID-----FNK-LDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 166 livD~vSs~g~~---p-~d-----~~~-iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
+|+|-+=+.+.. + .. ... -.+++.|.-|.++ -||+ |.++.+++.+++........
T Consensus 172 ii~DE~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~i~~~~~~i~~l~~~~~~~------------ 238 (351)
T pfam00155 172 LLVDEAYAGFVFGSPDAVATRALLAEGPNLLVVGSFSKAFG-LAGWRVGYILGNAAVISQLRKLARPF------------ 238 (351)
T ss_pred EEEECCCCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHCC-CCCCCEEEEEECHHHHHHHHHHHCCC------------
T ss_conf 99826633315279888613331145786799913615237-93515599998999999999971668------------
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 3210334786446664488999999998620-103189999999977999999987479716766882003653178982
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLK-KMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI 312 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~-~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~ 312 (391)
...+| .-.+...++.... ...-++.+.++.+++.+.+++.+.+.+ +..... .+...+.+.+
T Consensus 239 ----------~~s~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~p----~g~~~~~~~~ 300 (351)
T pfam00155 239 ----------YSSTH---LQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAG-LSVLPS----QAGFFLLTGL 300 (351)
T ss_pred ----------CCCHH---HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCC----CCEEEEEEEC
T ss_conf ----------74789---99999999958455689999999999999999999998789-857279----9449999978
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH-HCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 4731011373456788899999888-62828726655676750568615888999999999999
Q gi|254780153|r 313 VDSDIASLDINSQKSFCKSMLSFLE-KEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 313 ~d~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
+.. ....+...|. +.|+++..|..-..+..+||+. .+.++|+++.++++|
T Consensus 301 ~~~------------~~~~~~~~Ll~~~gV~v~pG~~fg~~~~iRis~-a~~s~e~i~~~~~rl 351 (351)
T pfam00155 301 DPE------------TAKELAQVLLEEVGVYVTPGSSPGVPGWLRITV-AGGTEEELEELLEAI 351 (351)
T ss_pred CCC------------CHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEE-CCCCHHHHHHHHHHC
T ss_conf 732------------299999999975989997788889999089981-789999999999419
No 39
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.49 E-value=2.5e-10 Score=85.04 Aligned_cols=316 Identities=16% Similarity=0.071 Sum_probs=196.8
Q ss_pred CCCCC----CCCCCCHHHHHHHHHHHCC--CC-CCCCH---HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 88688----8776896899998632103--65-32898---899999999999999968899857999748734899987
Q gi|254780153|r 14 PFFSS----GPCAKRPGWSLGILEGALL--GR-SHRCV---LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391)
Q Consensus 14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~-sHRs~---~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391)
.||++ |=+. +|. +.+++.+.+- |. +.-|. =...++.+..+.|.++++.++ ++++ .||..+.-++
T Consensus 45 lnf~SndYLGL~~-~p~-v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~lA~~~g~e~---allf-~SGy~aN~~~ 118 (395)
T PRK06939 45 INFCANNYLGLAN-HPE-LIAAAKAALDSHGFGMASVRFICGTQDLHKELEQKLAKFLGTED---AILY-SSCFDANGGL 118 (395)
T ss_pred EEEECCCCCCCCC-CHH-HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH
T ss_conf 9977676557889-989-99999999997299987768574783999999999999869994---9997-5527767889
Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC-CCEEEEEEECCCCEE---ECCE
Q ss_conf 53205789707997073688888765323876306740577765786767----855-657997420242022---0320
Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD-RDVVFVWNGTTSGVC---VPDV 155 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~v~~~h~ETstGv~---~~~~ 155 (391)
+..|+++++.++..--. .....+..+....... ..+.....+++.. ... ..-.++-.|..-.+. -|+.
T Consensus 119 i~aL~~~~d~i~~D~l~--HaSiidG~~ls~a~~~--~f~HnD~~~Le~~L~~~~~~~~~~~~ivtegVfSMdGDiapL~ 194 (395)
T PRK06939 119 FETLLGKEDAIISDALN--HASIIDGVRLCKAKRY--RYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIANLP 194 (395)
T ss_pred HHHHCCCCCEEEEECCC--CHHHHHHHHHCCCCEE--EECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH
T ss_conf 99964799889984563--5889999986589479--9668999999999996002158628999966777787601599
Q ss_pred EE--ECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf 35--02568614886401101102---------545-5685799970012001766515445677888765411445778
Q gi|254780153|r 156 GF--IPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL 223 (391)
Q Consensus 156 ~~--~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~ 223 (391)
++ +++.+++.++||=.=++|.. .+. ..++|++..+-.|+|+|- +=++|+.++..++-.....
T Consensus 195 ~l~~L~~~y~a~L~vDeAH~~GvlG~~G~G~~e~~gl~~~vdi~~gTlsKA~~G~-~Ggfv~g~~~~i~~l~~~~----- 268 (395)
T PRK06939 195 EICDLADKYDALVMVDDSHAVGFLGENGRGTVEHCGVMDRVDIITGTLGKALGGA-SGGYTAGKKEVIDWLRQRS----- 268 (395)
T ss_pred HHHHHHHHHCEEEEEECCCCEEEECCCCCCHHHHCCCCCCCEEEECCCHHHHHCC-CCCEEECCHHHHHHHHHHC-----
T ss_conf 9999999727379861430000345899867998099988689977327666247-6514516678899999847-----
Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 312320011232103347864466-6448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINT-PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~T-P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
+...+.| +|-..+.+..++|+.+++. +.+.++-+++.+.+++.+.+.++ ... ..
T Consensus 269 -----------------r~~ifStalpp~~~aa~~~al~~~~~~---~~~r~~L~~n~~~~r~~l~~~g~-~~~----~s 323 (395)
T PRK06939 269 -----------------RPYLFSNSLAPAIVAASIKVLELLEES---DELRDRLWENARYFREGMTAAGF-TLG----PG 323 (395)
T ss_pred -----------------HHHHCCCCCCHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHCCC-CCC----CC
T ss_conf -----------------122115799879999999999998749---59999999999999999996799-868----99
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 3653178982473101137345678889999988862828726655676750---5686158889999999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.++ ++++.+.++. ....+...|.++|+.+..-.|+.++++ +||......+.+||+.|+++|+.+-
T Consensus 324 ~sp-I~pi~iG~~~-----------~a~~~~~~L~~~Gi~v~~ir~PtVp~g~~rlRi~lta~ht~~did~lv~~l~~v~ 391 (395)
T PRK06939 324 EHP-IIPVMLGDAK-----------LAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (395)
T ss_pred CCC-EEEEEECCHH-----------HHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 999-7999969999-----------9999999999779748207899889898569988787799999999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780153|r 380 YFQ 382 (391)
Q Consensus 380 ~~~ 382 (391)
++.
T Consensus 392 ~~l 394 (395)
T PRK06939 392 KEL 394 (395)
T ss_pred HHC
T ss_conf 963
No 40
>PRK07179 hypothetical protein; Provisional
Probab=99.49 E-value=1.5e-10 Score=86.43 Aligned_cols=309 Identities=15% Similarity=0.102 Sum_probs=194.0
Q ss_pred CHHHHHHHHHHHCC--CC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 96899998632103--65----3289889999999999999996889985799974873489998753205789707997
Q gi|254780153|r 24 RPGWSLGILEGALL--GR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l--~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
+|+ |.++..+++- |. |..-.-..++..+..+.|.++++.++ ++++ +||-.+.-+++..|.++++.++..
T Consensus 70 hp~-v~~a~~~ai~~~G~g~~~Srl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~i~aL~~~~d~I~~D 144 (408)
T PRK07179 70 HPD-IIKAQIAALQEYGDGLVMSAVFLHDDSPKPQFEKKLAAFTGFES---GLLC-QSGWAANVGLLQTIADPNTPVYID 144 (408)
T ss_pred CHH-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 999-99999999998499987468031675899999999999868992---9998-753899999999967999889998
Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCC-CCEEEEEEECC---CCEEECCEEE--ECCCCCCEEEEEE
Q ss_conf 073688888765323876306740577765786767-855-65799742024---2022032035--0256861488640
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFD-RDVVFVWNGTT---SGVCVPDVGF--IPESREGLVICDA 170 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~v~~~h~ETs---tGv~~~~~~~--~~~~~~~llivD~ 170 (391)
.+..--.-+..+..+..+. ........+++.. +.. ..+.+| |.. .|-.-|+.++ +++.+++.++||=
T Consensus 145 --~~~HaSi~dG~rls~a~~~--~f~HND~~~Le~~L~~~~~~iIv~--egVfSMdGDiapL~~l~~la~~y~a~L~VDE 218 (408)
T PRK07179 145 --FFAHMSLWEGVRAAGAQAH--PFRHNDVDHLRRQIERHGPGIIVV--DSVYSTTGTIAPLVDIVDIAEEFGCVLVVDE 218 (408)
T ss_pred --CCCCHHHHHHHHHCCCCEE--EECCCCHHHHHHHHHHCCCCEEEE--EECCCCCCCCCCHHHHHHHHHHHCEEEEEEC
T ss_conf --8778889876761488579--947999999999998469977999--7423578876689999999987267988614
Q ss_pred CCHHHHC---------CCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC
Q ss_conf 1101102---------5455-68579997001200176651544567788876541144577831232001123210334
Q gi|254780153|r 171 TSAVFAR---------HIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240 (391)
Q Consensus 171 vSs~g~~---------p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
.=++|.. .+.. .++|++..+-.|+||+-.| +|+.|++..+-...... + ..
T Consensus 219 AH~~Gv~G~~G~G~~~~~gl~~~vdi~~gTlsKA~G~~GG--fi~gs~~~id~L~~~ar--~--~I-------------- 278 (408)
T PRK07179 219 SHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRAG--IITCPAELAEYFPFVSY--P--AI-------------- 278 (408)
T ss_pred CCEEEEECCCCCCHHHHCCCCCCCEEEEEEHHHHHHHCCC--CEECCHHHHHHHHHHCC--C--CC--------------
T ss_conf 3505236799987799849987872899371786763766--34237999999997187--7--45--------------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 78644666448899999999862010318999999997799999998747971676688200365317898247310113
Q gi|254780153|r 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL 320 (391)
Q Consensus 241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~ 320 (391)
.++ ++|-..+.+...+|+.+.++ +.+.++-+++.+.+++.+...++ .. ....|+ ++++.+.++.
T Consensus 279 -fSt--al~P~~~aa~~aal~ii~~~---~~~r~~L~~n~~~~r~~L~~~G~-~i----~~s~sp-Ivpi~~G~~~---- 342 (408)
T PRK07179 279 -FSS--TLLPHEIAGLEATLEVIESA---DERRARLHANARFLREGLSELGY-NI----RSSESQ-IIALETGSER---- 342 (408)
T ss_pred -CCC--CCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC----CCCCCC-EEEEECCCHH----
T ss_conf -566--67899999999999998629---99999999999999999983799-97----899999-7999859999----
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7345678889999988862828726655676750---56861588899999999999999999999987
Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF 386 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~ 386 (391)
....+...|.++|+.+..-.|+.++++ +||+.....+.+||+.|+++|+.+..+....+
T Consensus 343 -------~a~~~~~~L~~~Gi~v~~i~~PtVP~g~~rlRislsA~ht~~dId~ll~~l~~~~~e~~l~~ 404 (408)
T PRK07179 343 -------NTEVLRDALEERNVFGAVFCAPATPKNRALIRLSLNADLTKSDLDRVLEVCREARDEVDLWF 404 (408)
T ss_pred -------HHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf -------99999999997896284167998999981699874877999999999999999999809875
No 41
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.48 E-value=4.8e-10 Score=83.26 Aligned_cols=296 Identities=16% Similarity=0.127 Sum_probs=180.6
Q ss_pred CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHH
Q ss_conf 96899998632103653-28988999999999999999688998579997487348999875320578970799707368
Q gi|254780153|r 24 RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFG 102 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~ 102 (391)
+|. +.+++...+-..+ ||=|+-. ..+.++.|.+.+++|++..|++. .|+...++.++..++++|+.+++..-.|+
T Consensus 41 ~~~-v~~ai~~~~~~~~lnrYPd~~--~~~Lr~~lA~~~gv~~~~~Ii~G-nGSdElI~~i~~~~~~pgd~vl~~~Ptf~ 116 (356)
T PRK04870 41 PAE-LQAELGERLAEVALNRYPDPR--AAALKAALRAAMGVPAGADVLLG-NGSDELIQLIALACAKPGAKVLAPVPGFV 116 (356)
T ss_pred CHH-HHHHHHHHHHCCCCCCCCCCC--HHHHHHHHHHHHCCCCCCEEEEC-CCHHHHHHHHHHHHHCCCCEEEECCCCHH
T ss_conf 999-999999975122437798998--99999999998687987769981-67999999999998189898997677766
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCC--CCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH-
Q ss_conf 888876532387630674057776578676----785--5657997420242022032035--0256861488640110-
Q gi|254780153|r 103 LGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDF--DRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA- 173 (391)
Q Consensus 103 ~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~--~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs- 173 (391)
.. ..+++..+..+..+........+++. +.. .+.+.+|.=..-||...+..++ ++...+.++|+|-.=.
T Consensus 117 ~Y--~~~a~~~g~~~~~vpl~~d~~~d~~~~~~~i~~~~~klv~i~nPNNPTG~~~~~~~l~~l~~~~~~lvVvDEAY~e 194 (356)
T PRK04870 117 MY--RMSAKFAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVYLAYPNNPTGNLFDDADVEAIIAAAPGLVVIDEAYQP 194 (356)
T ss_pred HH--HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHH
T ss_conf 89--9999982987999846876562128899874146873899768999766336878899998506986552254075
Q ss_pred HHHCC-CC-CCCC-EEE-EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCC
Q ss_conf 11025-45-5685-799-97001200176651--5445677888765411445778312320011232103347864466
Q gi|254780153|r 174 VFARH-ID-FNKL-DVV-TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINT 247 (391)
Q Consensus 174 ~g~~p-~d-~~~i-Dv~-~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T 247 (391)
|.... ++ ..+. .++ .-+.-| + |-||+ |.++.+++.++++.+...+ +.
T Consensus 195 F~~~s~~~~~~~~~nlivlRTfSK-~-glaGlRvGy~ia~~~~i~~l~k~~~p-------------------------~~ 247 (356)
T PRK04870 195 FAGRSWLPRAAEFPNVLVMRTVSK-L-GLAGLRLGYLAGHPAWIAELDKVRPP-------------------------YN 247 (356)
T ss_pred HCCCCCCHHHHCCCCEEEEECCCC-C-CCCCCCEEEEEECHHHHHHHHHHCCC-------------------------CC
T ss_conf 567862101203796899860541-0-13656627775099999999773489-------------------------87
Q ss_pred CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHH
Q ss_conf 6448899999999862010318999999997799999998747971676688200365317898-247310113734567
Q gi|254780153|r 248 PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQK 326 (391)
Q Consensus 248 P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~ 326 (391)
-+.....+...+|+ ..+-++...++..+-.+.+++.+.+..++..+. |.+|..+. +++
T Consensus 248 vn~~a~~aa~~aL~---d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p------S~aNFil~~~~~------------ 306 (356)
T PRK04870 248 VNVLTQATALFALE---HVDVLDAQAAELRAERTRLAAALAALPGVTVFP------SAANFILVRVPD------------ 306 (356)
T ss_pred CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC------CCCEEEEEECCC------------
T ss_conf 33999999999974---958899999999999999999998369978889------988089998899------------
Q ss_pred HHHHHHHHHHHHCCEEECC-CCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 8889999988862828726-655-676750568615888999999999999999
Q gi|254780153|r 327 SFCKSMLSFLEKEEIAYDI-GSY-RDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 327 ~~~~~~~~~l~~~g~~~~~-~~~-r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
.+.+...|.++|+++.- .++ ...+..+||+.+ ++++.++|+++|+.+
T Consensus 307 --a~~l~~~L~~~gIlVR~~~~~~~~~~~~lRIsig---t~een~~ll~aLk~~ 355 (356)
T PRK04870 307 --AAAVFDGLKTRRVLVKNVSGMHPLLANCLRVTVG---SPEENAQFLAALKLA 355 (356)
T ss_pred --HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHH
T ss_conf --9999999996990999889888889998999839---999999999999985
No 42
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.48 E-value=2.1e-10 Score=85.53 Aligned_cols=298 Identities=13% Similarity=0.066 Sum_probs=183.1
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC----
Q ss_conf 88877689689999863210365----3289889999999999999996889985799974873489998753205----
Q gi|254780153|r 17 SSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---- 88 (391)
Q Consensus 17 ~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---- 88 (391)
-|+++. +|. ++..+-...++. .--+|-..++=+++.+-+.++++.|+..-.=.+++|||.+.-.+++---
T Consensus 5 ~~~~~~-~~~-~l~d~l~~~~n~~~~~~~~sP~~t~lE~~vi~wl~~l~g~p~~~~~G~~tsGgs~anl~al~~AR~~~~ 82 (345)
T cd06450 5 FVTTMD-PPA-LLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRAR 82 (345)
T ss_pred CCCCCC-HHH-HHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 758998-999-999999962176787643485899999999999999838997788769827568999999999999998
Q ss_pred --------CCCCE-EEEE--ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----------CCEEEEEEEC
Q ss_conf --------78970-7997--073688888765323876306740577765786767855-----------6579974202
Q gi|254780153|r 89 --------GYRGV-DVLA--WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----------RDVVFVWNGT 146 (391)
Q Consensus 89 --------~~~~~-~~~~--~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~v~~~h~ET 146 (391)
..... .+++ ..+++-. .++.+.+..+..+..+.....+.+.++.. -.+..+-..|
T Consensus 83 ~~~~~~~~~~~~~~~v~~s~~aH~Sv~---KAa~ilg~~~~~vp~d~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT 159 (345)
T cd06450 83 KRLKAGGGRGIDKLVIVCSDQAHVSVE---KAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTT 159 (345)
T ss_pred HHHHHCCCCCCCCEEEEECCCCCHHHH---HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 888741677888769998897528999---99997489769975399980889999999999986699738999557876
Q ss_pred CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCC--------CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHH
Q ss_conf 42022032035--02568614886401101102545--------568579997001200176651544567788876541
Q gi|254780153|r 147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHID--------FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEK 216 (391)
Q Consensus 147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d--------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~ 216 (391)
.||..=|+.++ +|++++.-+=||+.-.-...+.+ .+..|-+....+|.++.|.+.+++.++ +
T Consensus 160 ~~GaiD~l~~i~~i~~~~~iwlHVDaA~GG~~~~~~~~~~~~~gie~aDSit~d~HK~l~~p~~~~~~l~r--a------ 231 (345)
T cd06450 160 DTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR--A------ 231 (345)
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEECHHCCHHHCCCCCCHHHCCCCCCCEEEECCHHCCCCCCCCEEEEHH--H------
T ss_conf 76256789999999998499477510001201106220076579999888998812224878882688618--8------
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391)
. -+| ..|+.+= ..|+..+.+++-++++.+++.+++.+.++.+
T Consensus 232 ---------------------------------l-klw---~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~el~ 273 (345)
T cd06450 232 ---------------------------------L-KLW---ATLRRFG-RDGYGEHIDRIVDLAKYLAELIRADPGFELL 273 (345)
T ss_pred ---------------------------------H-HHH---HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf ---------------------------------8-999---9999998-9999999999999999999999629898996
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC-EEEEECCCCC-CHHHHHHHHHH
Q ss_conf 688200365317898247310113734567888999998886282872665567675-0568615888-99999999999
Q gi|254780153|r 297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPL-GLRVWVGVTV-EKEDLLLLCDW 374 (391)
Q Consensus 297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~-~~RIg~~g~i-~~~dv~~L~~a 374 (391)
.. + ...+|||+..++... + .....+...+.+.|..+ +.+.+.-|+ .+|+.+.+.. +.+||+.|++.
T Consensus 274 ~~-p---~l~iV~Fr~~~~~~~--d-----~~~~~l~~~l~~~g~~~-vs~t~~~g~~~lR~~i~n~~tt~~di~~l~~~ 341 (345)
T cd06450 274 GE-P---NLSLVCFRLKPSVKL--D-----ELNYDLSDRLNERGGWH-VPATTLGGPNVLRFVVTNPLTTRDDADALLED 341 (345)
T ss_pred CC-C---CEEEEEEEECCCHHC--C-----HHHHHHHHHHHHCCCEE-EEEEEECCEEEEEEEECCCCCCHHHHHHHHHH
T ss_conf 69-9---658999997682011--4-----89999999998139999-86159999789999979999999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780153|r 375 LRW 377 (391)
Q Consensus 375 Le~ 377 (391)
|+.
T Consensus 342 i~~ 344 (345)
T cd06450 342 IER 344 (345)
T ss_pred HHH
T ss_conf 974
No 43
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.48 E-value=2.7e-11 Score=91.21 Aligned_cols=294 Identities=10% Similarity=0.005 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEECC-C-CC
Q ss_conf 999999999996889985799974873489998753205789707997-07368888876532387630674057-7-76
Q gi|254780153|r 50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTAP-Y-GS 126 (391)
Q Consensus 50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~~-~-g~ 126 (391)
+++..+.+.++++. | .++|++ |||.++.++++.++++||.+++. +.+++.- .+....+..+..+... + ..
T Consensus 46 i~efe~~aAeflG~-d--~A~~V~-Ggt~Gnqa~i~t~c~~GD~VIv~~naH~S~~---~a~~laG~~~~~v~~~~~~~~ 118 (361)
T cd06452 46 IKDFHHDLAEFLGM-D--EARVTP-GAREGKFAVMHSLCEKGDWVVVDGLAHYTSY---VAAERAGLNVREVPNTGHPEY 118 (361)
T ss_pred HHHHHHHHHHHCCC-C--EEEEEC-CCCHHHHHHHHHHHCCCCEEEECCCCHHHHH---HHHHHCCCEEEEECCCCCCCC
T ss_conf 89999999987199-6--699946-8520899999998479988985575128899---888863846999567768566
Q ss_pred CCCHHHC----C-------CCCC-EEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEEC
Q ss_conf 5786767----8-------5565-7997420242022032035--0256861488640110110254556--85799970
Q gi|254780153|r 127 LPDFSKV----D-------FDRD-VVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFS 190 (391)
Q Consensus 127 ~~~~~~~----~-------~~~~-v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~ 190 (391)
..+++.. + ..+. +.++|..-.-|...+..++ ++|.++.++++|+.=+.+-+|.+.. +.|.+..|
T Consensus 119 ~i~pe~~~~~Iee~~~e~g~~p~Lilit~~dy~yG~~~dl~~I~~iah~y~iPvlvD~A~~~g~lpv~a~~~gaD~v~~s 198 (361)
T cd06452 119 HITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGS 198 (361)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHCCCCEEEEE
T ss_conf 51889999999999986189964999966787736631379999999985996897154224757987545079689986
Q ss_pred CHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 01200176651544567788876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r 191 AQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS 270 (391)
Q Consensus 191 sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~ 270 (391)
.+|.|+.+...|++..+++..++......... -+... .-|. |..-..+|+|-..++-.+++ ++
T Consensus 199 ~hK~~~a~~p~gvL~~~~~~~~~v~R~~~~~~-~K~~~-----------~Lg~---t~~~~~~~~lmAS~~~~~~~--v~ 261 (361)
T cd06452 199 GHKSMAASAPIGVLATTEEWADIVFRTSQMFK-IKEVE-----------LLGC---TLRGAPLVTLMASFPHVKER--VK 261 (361)
T ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHCCCCH-HHHHH-----------HHCC---CCCCCHHHHHHCCCHHHHHH--HH
T ss_conf 56555345743788505067888874110110-45778-----------7467---86551799998072999999--98
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf 99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD 350 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~ 350 (391)
++..--++++.+.+.+.+.++++.+-.+|. ....+.|.. +.+......+.... ..+...|.++|+....-+
T Consensus 262 -~~~eev~~ar~~~~el~kI~G~~~~ge~p~--~~dl~~~dt--~~~~~~~~~~~~~G-~~L~~~L~~rgI~~~~~g--- 332 (361)
T cd06452 262 -RWDEEVEKARWFVAELEKIEGIKQLGEKPK--NHDLMFFET--PSFDEIAKKHKRRG-YFLYSELKKRGIHGIKPG--- 332 (361)
T ss_pred -HHHHHHHHHHHHHHHHHCCCCHHHCCCCCC--CCCCEEECC--CCCEEEEECCCCCC-CHHHHHHHHCCCEEECCC---
T ss_conf -777899999999999842845312155777--677456147--86324410478650-069999987697687168---
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 675056861588899999999999999
Q gi|254780153|r 351 APLGLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 351 ~~~~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
.-+.+.+++|| ++.|+++.|++|+.+
T Consensus 333 ~t~~~~~~tyG-~t~e~i~~l~~a~ke 358 (361)
T cd06452 333 LTRYFKLSTYG-LTWEQVEYVVDAFKE 358 (361)
T ss_pred CCCEEEEEEEC-CCHHHHHHHHHHHHH
T ss_conf 53379999951-688899999999999
No 44
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.48 E-value=4e-10 Score=83.76 Aligned_cols=315 Identities=17% Similarity=0.097 Sum_probs=193.4
Q ss_pred CCCC----CCCCCCHHHHHHHHHHHCC--CCCCCC----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 8688----8776896899998632103--653289----88999999999999999688998579997487348999875
Q gi|254780153|r 15 FFSS----GPCAKRPGWSLGILEGALL--GRSHRC----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMAL 84 (391)
Q Consensus 15 ~F~p----GP~~~~p~~v~~~~~~~~l--~~sHRs----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~ 84 (391)
||++ |=+. +|+ |.+++.+.+- |.+--+ .=...++.+..+.|.++++.++ ++++ .||..++-+++
T Consensus 49 ~f~SNdYLGL~~-~p~-v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~i 122 (404)
T PRK13393 49 VWCSNDYLGMGQ-HPA-VLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA---ALLF-TSGYVSNWAAL 122 (404)
T ss_pred EEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHHH
T ss_conf 877434457678-999-99999999998689987660201887999999999999869991---9998-74488899999
Q ss_pred HHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCCCCCEEEEEEECCCCEE---ECCE
Q ss_conf 320578--970799707368888876532387630674057776578676----7855657997420242022---0320
Q gi|254780153|r 85 WSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDFDRDVVFVWNGTTSGVC---VPDV 155 (391)
Q Consensus 85 ~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~v~~~h~ETstGv~---~~~~ 155 (391)
..|.++ ++.++.. .......-+..+..+..+.. .......+++. .+.... .++-.|..-.+. -|..
T Consensus 123 ~aL~~~~~~d~i~~D--~l~HaSi~dG~rls~a~~~~--f~HnD~~~Le~~L~~~~~~~~-~lIv~egVfSMdGDiapL~ 197 (404)
T PRK13393 123 STLASRLPGCVILSD--ELNHASMIEGIRHSRAETRI--FRHNDPADLERKLSDLDPHAP-KLVAFESVYSMDGDIAPIA 197 (404)
T ss_pred HHHHCCCCCCEEEEE--CCCCHHHHHHHHHCCCCEEE--EECCCHHHHHHHHHHCCCCCC-CEEEEEEECCCCCCCCCHH
T ss_conf 998578999789998--75459899988854798799--827999999999985622488-0899965535578856899
Q ss_pred EE--ECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf 35--02568614886401101102---------545-5685799970012001766515445677888765411445778
Q gi|254780153|r 156 GF--IPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL 223 (391)
Q Consensus 156 ~~--~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~ 223 (391)
++ +++.+++.++||=.=++|.. .+. .+++|++..+-.|+||+-.| +|+.|+...+-......+
T Consensus 198 el~~L~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~gl~~~vdi~~gTfsKA~Gs~Gg--~v~gs~~~id~L~~~ar~--- 272 (404)
T PRK13393 198 EICDVADKHGAMTYLDEVHAVGLYGPRGGGIAERDGLADRLTIIEGTLAKAFGVVGG--YITGSAALCDFIRSFASG--- 272 (404)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCC--EEECCHHHHHHHHHHCHH---
T ss_conf 999999740949998443200103689987888738988762899717764335775--031476889999984728---
Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 31232001123210334786446664488999999998620103189999999977999999987479716766882003
Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR 303 (391)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r 303 (391)
.. .+|. +|-..+.+...+++.++++ +.+.+|.+++...+++.+...++ ... ...
T Consensus 273 -~I---------------fSta--lpP~~~aa~~~al~~l~~~---~~~r~~L~~n~~~~r~~L~~~G~-~~~----~s~ 326 (404)
T PRK13393 273 -FI---------------FTTS--LPPAVAAGALASIRHLKAS---SAERERHQDRVARLRARLDQAGV-PHM----DNP 326 (404)
T ss_pred -HH---------------HCCC--CCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CCC----CCC
T ss_conf -65---------------2779--8899999999999998619---69999999999999999996699-978----999
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 653178982473101137345678889999988862-828726655676750---5686158889999999999999999
Q gi|254780153|r 304 SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 304 S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
|+ ++++.+.++. ....+...|.++ |+.+..-.|+.++++ +||.+....+.+||+.|+++|+.+.
T Consensus 327 s~-Iipi~ig~~~-----------~a~~~~~~Ll~~~Gi~v~~i~~PtVP~g~~rLRi~lsA~ht~~did~l~~~L~~v~ 394 (404)
T PRK13393 327 SH-IVPVMVGDAV-----------LCKQISDLLLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIW 394 (404)
T ss_pred CC-EEEEEECCHH-----------HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 88-7999969999-----------99999999986189899988898589997359987688799999999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 380 YFQK 383 (391)
Q Consensus 380 ~~~k 383 (391)
++..
T Consensus 395 ~~lg 398 (404)
T PRK13393 395 ARLG 398 (404)
T ss_pred HHCC
T ss_conf 9839
No 45
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.45 E-value=9.1e-10 Score=81.49 Aligned_cols=310 Identities=15% Similarity=0.113 Sum_probs=184.7
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf 8868887768-968999986321036532898899999999999999968899857999748734899987532057897
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391)
..|+.|=.+. +|..+.+++...+- ..||=|+.. ..+.++.+.+.++++.+ .+++...|++.++..++.-++++|+
T Consensus 38 i~ls~nenp~gp~p~v~~a~~~~~~-~~~~YPd~~--~~~Lr~aiA~~~gv~~e-~ii~~gnGs~e~i~~l~~~~~~~Gd 113 (369)
T PRK00950 38 IKLGSNENPLGPSPKAVEALIDEAP-NIHQYPEPD--APELREAISKYTGVPVE-NIIVGGDGADEIIDVLMRILIDEGD 113 (369)
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCC--HHHHHHHHHHHHCCCCC-CEEEECCCHHHHHHHHHHHHHCCCC
T ss_conf 8812989986788999999998753-258799988--89999999998681975-8799756499999999999957999
Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE--ECCCCC
Q ss_conf 07997073688888765323876306740--577765786767-----855657997420242022032035--025686
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF--IPESRE 163 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~--~~~~~~ 163 (391)
.+++.+=+|+.. ....+..+..+.... ...+...+++++ +..+.+.++.=..-||...+..++ ++...+
T Consensus 114 ~vl~~~P~y~~Y--~~~a~~~G~~~~~v~~~~~~~f~~d~~~l~~~i~~~tklv~l~nPnNPTG~~~~~~el~~l~~~~~ 191 (369)
T PRK00950 114 EVIIPIPTFTYY--EISARACGAKPVYAKFDREEDFKLDVESVLNAITDKTKIIFLCTPNNPTGNLIPEEDIRKIVESTD 191 (369)
T ss_pred EEEECCCCCHHH--HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHCCC
T ss_conf 999898873036--999998398202236771249988999999736767608998089998783247999878987188
Q ss_pred CEEEEEECCH-HHHCCC-----CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 1488640110-110254-----5568579997001200176651--5445677888765411445778312320011232
Q gi|254780153|r 164 GLVICDATSA-VFARHI-----DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 164 ~llivD~vSs-~g~~p~-----d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
.++|+|=+=. |...+. +.+++ ++.-+.-|.++ -||+ |.++.+++.++.......
T Consensus 192 ~~vv~DEaY~ef~~~~~~~l~~~~~n~-iv~~SfSK~~~-laGlRlGy~i~~~~li~~l~~~~~---------------- 253 (369)
T PRK00950 192 ALVFVDEAYIEFAEYDLTELALEYDNV-LVLRTFSKVFG-LAGMRIGYGIMPKWIIEYMMRIKP---------------- 253 (369)
T ss_pred EEEEECCCHHHHCCCCHHHHHHHCCCE-EEEEECCHHHH-CCCCEEEEEECCHHHHHHHHHHCC----------------
T ss_conf 799942426752579715678745865-89841215540-577504676469999999998568----------------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECC
Q ss_conf 103347864466644889999999986201031899999999779999999874797167668820036531789-8247
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVD 314 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d 314 (391)
+++-+.....+...+|+ .+.-++...+..++..+.+.+.+.+.+++.... |.++..+ .+++
T Consensus 254 ---------~~~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~l~~~~v~p------s~anFil~~~~~ 315 (369)
T PRK00950 254 ---------PFSLTRLSQAAAIAALR---DKEFIEKSIELGIESREYLYEGLKKFKPLKVYP------SEANYVLVDVKP 315 (369)
T ss_pred ---------CCCHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC------CCCEEEEEECCC
T ss_conf ---------75706999999999950---958899999999999999999998579977878------986189998999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 310113734567888999998886282872665-5676750-5686158889999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
. . ....+...|.++|+++.-+. ++..+++ +||+.+ ++++.++|+++|+..+
T Consensus 316 ~-~----------~~~~~~~~Ll~~gI~Vr~g~~f~~~~~~~iRisig---t~~en~~ll~al~~il 368 (369)
T PRK00950 316 G-M----------TAKEFTEELLKKGVIVRDCTSFEGLGDYYIRVSIG---TLEENERFLEILKEIV 368 (369)
T ss_pred C-C----------CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHH
T ss_conf 9-9----------99999999996995999687777789898999808---9999999999999985
No 46
>TIGR00858 bioF 8-amino-7-oxononanoate synthase; InterPro: IPR004723 8-amino-7-oxononanoate synthase (2.3.1.47 from EC) is involved in biotin biosynthesis. Synonym(s): AONS, 8-amino-7-ketopelargonate synthase, 7-keto-8-amino-pelargonic acid synthetase, 7-KAP synthetase; GO: 0008710 8-amino-7-oxononanoate synthase activity, 0009102 biotin biosynthetic process.
Probab=99.44 E-value=6.5e-11 Score=88.74 Aligned_cols=303 Identities=14% Similarity=0.047 Sum_probs=200.4
Q ss_pred CCCCHHHHHHH-HHHHCC--C----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC----
Q ss_conf 76896899998-632103--6----532898899999999999999968899857999748734899987532057----
Q gi|254780153|r 21 CAKRPGWSLGI-LEGALL--G----RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG---- 89 (391)
Q Consensus 21 ~~~~p~~v~~~-~~~~~l--~----~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~---- 89 (391)
++ +|+ |.++ ..+..- | =||--.=...++++..+.|.++.+++. -++| |||..|+-+++..|++
T Consensus 37 a~-hp~-l~~af~~~~~~~~G~Gs~aSrLv~G~~~~H~~LE~~lA~~kg~Ea--ALlF--sSGY~AN~Gvi~aL~~~~~l 110 (378)
T TIGR00858 37 AS-HPE-LIQAFAQQAAEQYGAGSTASRLVTGNSPLHEELEEELAEFKGTEA--ALLF--SSGYLANVGVISALVGKRVL 110 (378)
T ss_pred CC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--EEEE--HHHHHHHHHHHHHHHHCCCC
T ss_conf 37-988-999999999986687736743403785689999999998628820--3420--02789999999987515765
Q ss_pred -CCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECC---EE--EEC
Q ss_conf -89707997073688888765323876306740577765786767----855657997420242022032---03--502
Q gi|254780153|r 90 -YRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPD---VG--FIP 159 (391)
Q Consensus 90 -~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~---~~--~~~ 159 (391)
++|.+ ..-.+..--..+.++.-++.+.+ .+.+....++.. .....-.++=.|++=-|--+. .+ .+|
T Consensus 111 ~~~Dli--lsD~LNHASl~dG~rLS~A~~~~--y~H~D~~~L~~lL~~~~g~~~~~livTDGVFSMDGD~APL~~L~~la 186 (378)
T TIGR00858 111 EKGDLI--LSDALNHASLIDGCRLSGARVLR--YRHNDVEHLERLLEKNRGKERRKLIVTDGVFSMDGDIAPLPQLVALA 186 (378)
T ss_pred CCCCEE--EEHHHHHHHHHHHHHCCCCCEEE--CCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCHHHHHHHH
T ss_conf 678604--42025477789864159862787--06899899999997401513776889700131688848978999999
Q ss_pred CCCCCEEEEE--------ECCHHHHC-CCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 5686148864--------01101102-545--568579997001200176651544567788876541144577831232
Q gi|254780153|r 160 ESREGLVICD--------ATSAVFAR-HID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 160 ~~~~~llivD--------~vSs~g~~-p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
+.+++.|+|| +-+..|.. .+. ...+|+.+..--|+||+-.| +|+.|+.+.+=+.+..
T Consensus 187 ~~~~A~L~VDDAHgtGVlG~~G~G~~~~fgl~~~~~~i~~GTlSKAlGs~Ga--~V~g~~~l~~yL~n~A---------- 254 (378)
T TIGR00858 187 ERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPAPVDIQVGTLSKALGSYGA--YVAGSEALIDYLINRA---------- 254 (378)
T ss_pred HHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHHHCHH--HHHHHHHHHHHHHHCC----------
T ss_conf 8709889998654536628875414976598888726998613166540525--6354589999998415----------
Q ss_pred CCHHHHHHCCCCCCCCCC---CCCHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 001123210334786446---664488999999998620-1031899999999779999999874797167668820036
Q gi|254780153|r 229 MVKGGRVMEGLFCGETIN---TPSLLCIEDYIDALLWLK-KMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS 304 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~---TP~v~~i~al~~~l~~i~-~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS 304 (391)
..++| .||- .+-+..++|+.|. ++ .++.++=.++.+.+++.+++.+-+.+ .. ....|
T Consensus 255 -------------R~~If~TaLPPa-~~aA~~aAl~~i~~~~---~~rr~~L~~~~~~~~~~l~~~~~~~f-~~-~~~~T 315 (378)
T TIGR00858 255 -------------RTFIFSTALPPA-VVAAALAALELIQEEE---PWRREKLLALIARLRKGLEALGKLVF-QL-MPSET 315 (378)
T ss_pred -------------CCCEECCCCCHH-HHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHCCCCCC-EE-CCCCC
T ss_conf -------------764232366588-9999999999722248---64789999999999999875476631-01-67898
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 53178982473101137345678889999988862828726655676750---5686158889999999999999
Q gi|254780153|r 305 NTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+ ++++.+.|+..+ . .+.+.|.++|+.+..=.++++|+| +||+..-+.+++||+.|+++|+
T Consensus 316 P-I~P~~~G~~~~a--------l---~~a~~L~~~G~~v~AIRPPTVP~G~sRLR~Tl~A~Ht~~di~~L~~~l~ 378 (378)
T TIGR00858 316 P-IVPVIIGDEESA--------L---ALAEELQEQGIFVGAIRPPTVPKGTSRLRLTLSAAHTEGDIDRLLEALK 378 (378)
T ss_pred C-CEEEEECCCHHH--------H---HHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCC
T ss_conf 6-258870892899--------9---9999998779479102588887796104557740489889999999739
No 47
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.43 E-value=1.3e-09 Score=80.55 Aligned_cols=318 Identities=16% Similarity=0.086 Sum_probs=193.8
Q ss_pred CCCCC----CCCCCCHHHHHHHHHHHCC--CCCCC-C---HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 88688----8776896899998632103--65328-9---8899999999999999968899857999748734899987
Q gi|254780153|r 14 PFFSS----GPCAKRPGWSLGILEGALL--GRSHR-C---VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391)
Q Consensus 14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~sHR-s---~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391)
.||++ |=+. +|+ |.+++.+.+- |.+-- | .=...++.+..+.|.++++.++ ++++ .||-.+.-++
T Consensus 48 ~~FsSNdYLGLs~-~p~-v~~a~~~a~~~~G~gs~gSrl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~ 121 (406)
T PRK09064 48 TVWCSNDYLGMGQ-HPK-VIEAMHEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA---ALVF-TSGYVSNDAT 121 (406)
T ss_pred EEEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH
T ss_conf 9846544357779-999-99999999998489987777040587999999999999858885---8997-7417888999
Q ss_pred HHHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEE---CC
Q ss_conf 5320578--9707997073688888765323876306740577765786767----8556579974202420220---32
Q gi|254780153|r 84 LWSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCV---PD 154 (391)
Q Consensus 84 ~~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~---~~ 154 (391)
+..|.+. ++.++.. ....--.-+..+..+..+.. .......+++.. +..... ++-.|..-.+.. |+
T Consensus 122 i~aL~~~~p~~~i~~D--~l~HASiidG~rls~a~~~~--f~HND~~~Le~~L~~~~~~~~~-iIvtEgVfSMdGDiapL 196 (406)
T PRK09064 122 LSTLAKLIPGCVIFSD--ELNHASMIEGIRRSGAEKHI--FRHNDVAHLEELLAAADPDRPK-LIAFESVYSMDGDIAPI 196 (406)
T ss_pred HHHHHCCCCCCEEEEE--CCCCHHHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHCCCCCCE-EEEEEECCCCCCCCCCH
T ss_conf 9998567999689981--42332489998755995899--4799989999999837778970-99997000167876579
Q ss_pred EE--EECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf 03--502568614886401101102---------545-568579997001200176651544567788876541144577
Q gi|254780153|r 155 VG--FIPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 155 ~~--~~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391)
.+ .+++++++.++||=.=++|.. .+. .+++|++..+-.|+||+-.| +|+.|+..++-...... .
T Consensus 197 ~~l~~l~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~g~~~~vdi~~gTfsKA~Gs~Gg--fv~gs~~~id~L~~~ar-~- 272 (406)
T PRK09064 197 AEICDLADKYNAMTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMGG--YIAGSASLIDAVRSYAP-G- 272 (406)
T ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCE--EECCCHHHHHHHHHHCC-C-
T ss_conf 9999999860959999622102203688877398729866670799216652357750--43178899999987185-3-
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
. -.+|. +|-..+.+...+++.+.++ +.+.++-+++.+.+++.+...++ .. . ..
T Consensus 273 --~---------------IfSta--lpp~~~aa~~~al~~l~~~---~~~r~~L~~n~~~~r~~l~~~G~-~~-~---~s 325 (406)
T PRK09064 273 --F---------------IFTTS--LPPAIAAAALASIRHLKES---NEERERHQERAAKLKASLDAAGI-PV-M---PN 325 (406)
T ss_pred --C---------------CCCCC--CCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC-C---CC
T ss_conf --0---------------02678--9999999999999998709---07789999999999986774499-74-7---99
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 3653178982473101137345678889999988862-828726655676750---568615888999999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
.|+ ++++.+.++. ....+...|.++ |+.+..-.|+.++++ +||++....+.+||+.|+++|+.+
T Consensus 326 ~sp-Iipi~ig~~~-----------~~~~~~~~Ll~~~Gi~v~~I~~PtVP~g~~rLRi~l~a~ht~edid~l~~~L~ev 393 (406)
T PRK09064 326 PSH-IVPVIVGDPE-----------KCKKASDRLLEEHGIYVQPINYPTVPRGTERLRITPTPLHTDEMIDHLVEALVEV 393 (406)
T ss_pred CCC-EEEEEECCHH-----------HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 998-7999959999-----------9999999999868987810889988999846998868669999999999999999
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254780153|r 379 FYFQKIS 385 (391)
Q Consensus 379 ~~~~k~~ 385 (391)
.++...+
T Consensus 394 ~~~~g~~ 400 (406)
T PRK09064 394 WARLGLP 400 (406)
T ss_pred HHHCCCC
T ss_conf 9980998
No 48
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.43 E-value=1.8e-09 Score=79.59 Aligned_cols=311 Identities=13% Similarity=0.039 Sum_probs=182.8
Q ss_pred CCCCCC----CCCCCCHHHHHHHHHHHCC-----------CC-CCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 888688----8776896899998632103-----------65-3289-88999999999999999688998579997487
Q gi|254780153|r 13 RPFFSS----GPCAKRPGWSLGILEGALL-----------GR-SHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPAS 75 (391)
Q Consensus 13 ~~~F~p----GP~~~~p~~v~~~~~~~~l-----------~~-sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~Gs 75 (391)
-.||++ |=+. +|+ +.+++...+- |. +-|- .=...++.++.+.|.++++.++ ++++ +|
T Consensus 6 ~lnFsSNDYLGLs~-~p~-v~~a~~~a~~~y~~~~~~~g~Gs~gSrl~~G~~~~h~~LE~~lA~f~g~e~---allf-~s 79 (370)
T PRK05937 6 SIDFVTNDFLGFSR-STT-LVHEVEKRYRLYCEQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---AFIV-PS 79 (370)
T ss_pred EEECCCCCCCCCCC-CHH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CC
T ss_conf 78240320038789-989-999999999987312578987686878262786999999999999869993---9998-76
Q ss_pred CHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----C-CCCCEEEEEEECCCCE
Q ss_conf 3489998753205789707997073688888765323876306740577765786767----8-5565799742024202
Q gi|254780153|r 76 DTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----D-FDRDVVFVWNGTTSGV 150 (391)
Q Consensus 76 gT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~v~~~h~ETstGv 150 (391)
|..+.-+++..|+++++.++..-.... -..+..+..+..+.. .......+++.. . ....-.++-.|..-.+
T Consensus 80 Gy~AN~~~i~al~~~~d~i~~D~l~Ha--Si~dG~rls~a~~~~--f~Hnd~~~Le~~L~~~~~~~~~~~~iv~egVfSM 155 (370)
T PRK05937 80 GYMANLGLCAHLSSVTDYVLWDEQVHI--SVVYSLSVISGKHQS--FRHNDLDHLESLLESCRAVSFGRIFIFVCSVYSF 155 (370)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCHH--HHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 688999999960899998999630619--999999864998699--6899989999999853311788559999405667
Q ss_pred ---EECCEEE--ECCCCCCEEEEEECCHHHHC---------CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHH
Q ss_conf ---2032035--02568614886401101102---------545568579997001200176651544567788876541
Q gi|254780153|r 151 ---CVPDVGF--IPESREGLVICDATSAVFAR---------HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEK 216 (391)
Q Consensus 151 ---~~~~~~~--~~~~~~~llivD~vSs~g~~---------p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~ 216 (391)
.-|..++ +++++++.++||=.=++|.+ .+..++++.+...--|+||+-. ++++.+++..+-...
T Consensus 156 dGdiapL~~l~~l~~~y~a~l~vDeAH~~Gv~G~~GrG~~e~~g~~~~~~i~~TlsKAlGs~G--gfv~~s~~~i~~l~~ 233 (370)
T PRK05937 156 KGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--AALLSSSEVKQDLML 233 (370)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCCCCCCCHHHHCCCCCCCEEEEEHHHHHHHCC--EEEECCHHHHHHHHH
T ss_conf 787558999999999819789973300004337999757887399887789813256621065--389828899999998
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391)
. .++ .. .+| .+|-..+.+...+++.+.+++ +...++..++.+.+++.+..
T Consensus 234 ~--ar~--~I---------------fSt--alpP~~~aa~~~al~~l~~e~--~~~r~~l~~~~~~~~~~~~~------- 283 (370)
T PRK05937 234 N--SPP--LR---------------YST--GLPPHALISIQVAYDFLSQEG--ELARKQLFRLKEYFAQKFSS------- 283 (370)
T ss_pred H--CCC--CC---------------CCC--CCCHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHCCC-------
T ss_conf 3--964--00---------------367--558999999999999998595--99999999999999985066-------
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 68820036531789824731011373456788899999888628287266556767505686158889999999999999
Q gi|254780153|r 297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
...+. ++++.+++. ....+...|.++|+.+..-.|+.+++ +||......+.+||+.|+++|.
T Consensus 284 ----~~~~~-i~pI~~~~~------------~~~~~~~~L~~~Gi~v~~Ir~PtVPr-LRi~l~A~HT~edId~Lv~~L~ 345 (370)
T PRK05937 284 ----AAPGC-VQPIFLPDI------------SEQELYSKLVETGIRVGVVCFPTKPF-LRVNLHAFNTEDEVDILVSVLH 345 (370)
T ss_pred ----CCCCC-EEEEEECCH------------HHHHHHHHHHHCCEEEEEECCCCCCE-EEEECCCCCCHHHHHHHHHHHH
T ss_conf ----78997-488980838------------99999999997897798689899883-7886186669999999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780153|r 377 WVFYFQK 383 (391)
Q Consensus 377 ~~~~~~k 383 (391)
.++++..
T Consensus 346 ~~~~~~~ 352 (370)
T PRK05937 346 SYLEKCQ 352 (370)
T ss_pred HHHHHHH
T ss_conf 9999986
No 49
>PRK07310 consensus
Probab=99.43 E-value=1.1e-09 Score=80.86 Aligned_cols=321 Identities=10% Similarity=0.032 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 6899998632103----653289889999999999999996889985799974873489998753205789707997073
Q gi|254780153|r 25 PGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391)
Q Consensus 25 p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391)
|..+++++...+- +.+-.+.-..++-+.+.+.+++-++..=+-+=++++.|++.++..++..++.+||.+++-.=.
T Consensus 45 p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lR~Aia~~~~~~~g~~v~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~ 124 (395)
T PRK07310 45 PKNIQDAAIESIENGRASFYTVASGLPELKAAIATYFENFYGYHLSPNQIVVGTGAKFILYAFFMAVLNPGDEVIIPTPY 124 (395)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 99999999999828988878997473999999999989987899883209987788999999999974999989983787
Q ss_pred HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEE
Q ss_conf 68888876532387630674-05777657867678-----55657997420242022032035-----025686148864
Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICD 169 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD 169 (391)
|..- ...+...++..+.+. ..+.+...++++++ ..+.+.+++=..-||...+..+. +|..++.++|.|
T Consensus 125 Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a~~~~i~visD 203 (395)
T PRK07310 125 WVSY-SDQVKMAEGVPVFVQAKEENHFKVTVEQLEAARTSKTKVVLLNSPSNPTGMIYSAEELRAIGEWAVEHDILILAD 203 (395)
T ss_pred CCCH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEC
T ss_conf 7546-999997599899975674457450499999746589749998999798562663541467765565268799943
Q ss_pred ECCH---HHHC---CC-----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 0110---1102---54-----556857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r 170 ATSA---VFAR---HI-----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 170 ~vSs---~g~~---p~-----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
-+=+ +.+. |+ +..+--+++.|.-|.++ -|| +|.++..++.+++.....
T Consensus 204 EiY~~l~~~g~~~~p~~~~~~~~~~~~i~~~s~SK~f~-~~G~RiG~~v~~~~~i~~~~~~~------------------ 264 (395)
T PRK07310 204 DIYGRLVYNGNQFTPISSLSEAIRKQTIVINGVSKTYA-MTGWRVGFAVGEPEIISAMSKIA------------------ 264 (395)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCC-CCCCEEEEEECCHHHHHHHHHHH------------------
T ss_conf 65210014898888888841243257358840123567-76654899977999999999998------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
.++...++...-++...++..-. .-++.+.+.++++.+.+++.+...+++....++-.+. +-..++..
T Consensus 265 -----~~~~~~~~~~~q~aa~~al~~~~--~~~~~~~~~~~~r~~~~~~~l~~~~g~~~~~P~g~~~----~w~~~~~~- 332 (395)
T PRK07310 265 -----GQTTSNLTAVSQYAAIEAFTGSQ--SSVEEMRLAFEERLNIIYPLLAQVPGFEVVKPQGAFY----LFPNVKKA- 332 (395)
T ss_pred -----HHHCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEE----EEEECCCH-
T ss_conf -----65047813899999999996888--9999999999999999999873089968726986689----81666511-
Q ss_pred CCCCCHHHHHHHHHHHHHH-HHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 0113734567888999998-886282872665567675056861588899999999999999999999
Q gi|254780153|r 317 IASLDINSQKSFCKSMLSF-LEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
........ ..++... +.+.|+++--|..=..+..+|++.. .+++.++.-++-|+.+++.-|
T Consensus 333 ~~~~g~~d----~~~~~~~ll~~~gV~v~PG~~FG~~~~vRl~~a--~~~~~l~eal~RL~~~l~s~~ 394 (395)
T PRK07310 333 MEMKGYTD----VTDFTTAILEEVGVALVTGAGFGAPENVRLSYA--TDLETLKEAVRRLHVFMESNE 394 (395)
T ss_pred HCCCCCCC----HHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 12478898----999999999849999988976699998899980--999999999999999998777
No 50
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.42 E-value=3e-10 Score=84.53 Aligned_cols=287 Identities=16% Similarity=0.182 Sum_probs=170.2
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..|-+.. -.+..+||-.|+.+++++++++|+.+++....||.- +........+..++..
T Consensus 62 ~nPT~~~lE~~l---a~LEg~~----~a~~~~SGmaAis~~l~~ll~~Gd~vv~~~~~YggT~~l~~~~l~~~Gi~v~fv 134 (398)
T PRK08249 62 TNPTVQALEAKV---KELEGAE----AATSFSTGMAAISNTLYTFLSPGDRVVSIKDTYGGTNKIFEEFLPRMGVDVTLC 134 (398)
T ss_pred CCHHHHHHHHHH---HHHHCCC----EEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf 886599999999---9982997----089964789999999999718999899818984379999997601598699987
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCE-----EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--56579974202420220320-----3502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDV-----GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~-----~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.++++. .+...+++.||.+--.+.+. ..+++++++++|||-+ +-+...|++. ++|+++-|.
T Consensus 135 d~~-----d~~~~~~ai~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~ 208 (398)
T PRK08249 135 ETG-----DHEQIEREIAKGCDLLYLETPTNPTLKITDIRRLSAAAHEVGALVVVDNTFATPINQNPLAL-GADLVVHSA 208 (398)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCC-CCCEEEECC
T ss_conf 999-----86999985588861899844899974666479999999874996998477420312782115-798799726
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-++|-+-+ ++++.+++.++++.. +. + ..|. +++-+.-|.+...| ..+
T Consensus 209 TKyi~GHsDvlgGvv~~~~~~~~~l~~------------~~---~-----~~G~---~lsP~~a~L~~RGL------~TL 259 (398)
T PRK08249 209 TKFLGGHADALGGVVCGPEALMAQVYH------------YR---E-----INGA---TLDPFAAYLILRGM------KTL 259 (398)
T ss_pred CCEECCCCCEEEEEECCCHHHHHHHHH------------HH---H-----HCCC---CCCCHHHHHHHCCC------CCH
T ss_conf 620036876351056088999999999------------99---7-----0488---78917789986468------979
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
.-|.+||.+++..+-+|+++++..... ...|.+ .....+.|.+.+.. +. .+.+...|
T Consensus 260 ~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~g~~------~~----~~~f~~~l 329 (398)
T PRK08249 260 ALRVRQQQENAMALAEYLQTEPLVEAVNYPGLPTHPNHAIAKAQMRGFGGMLSFALKGGM------DT----VRRLLPRL 329 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCH------HH----HHHHHHHC
T ss_conf 999999988999999999839980779899999996889999867999971179981899------99----99999718
Q ss_pred HHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 862828726655676----------------------75-05686158889999999999999999999998
Q gi|254780153|r 337 EKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 337 ~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
.--..+..+|+.++. .. -+|++++ .||++.|++-|+.||...|.+
T Consensus 330 ~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~~DLi~DL~qAL~~ir~~ 397 (398)
T PRK08249 330 QYAHRAANLGAVETIVGPARTTSHVENTPEERAALGIPEGLVRISVG----IEDTEDLIADLAQAFASVREE 397 (398)
T ss_pred CCCEECCCCCCCCCEEECHHHCCCCCCCHHHHHHCCCCCCEEEEEEE----CCCHHHHHHHHHHHHHHHHHH
T ss_conf 80500556387661202813247634999999976989394999960----099999999999999998855
No 51
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.42 E-value=3.2e-09 Score=77.99 Aligned_cols=315 Identities=18% Similarity=0.144 Sum_probs=191.0
Q ss_pred CCCCC----CCCCCCHHHHHHHHHHHCC--CCC---CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 88688----8776896899998632103--653---289-8899999999999999968899857999748734899987
Q gi|254780153|r 14 PFFSS----GPCAKRPGWSLGILEGALL--GRS---HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391)
Q Consensus 14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~s---HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391)
.||++ |=+. +|+ |.+++.+.+- |.+ -|- .=..+++.+..+.|.++++.++ ++++ .||-.++-++
T Consensus 49 l~f~SNdYLGLs~-~p~-v~~a~~~a~~~yG~gs~gSrl~~G~~~~h~~LE~~LA~f~g~e~---allf-~SGy~AN~g~ 122 (410)
T PRK13392 49 TIWCSNDYLGMGQ-HPD-VIGAMVDALDRYGAGAGGTRNISGTSHEHVLLERELADLHGKQS---ALLF-TSGYVSNDAA 122 (410)
T ss_pred EEEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH
T ss_conf 8977566657789-999-99999999998099987758562787999999999999869992---9997-6647888999
Q ss_pred HHHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECC---CCEEECC
Q ss_conf 5320578--9707997073688888765323876306740577765786767----85565799742024---2022032
Q gi|254780153|r 84 LWSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTT---SGVCVPD 154 (391)
Q Consensus 84 ~~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETs---tGv~~~~ 154 (391)
+..|.+. ++.++. ......-.-+..+..+..+.. .......+++.. +.... .++-.|.. .|-.-|.
T Consensus 123 i~aL~~~~~~d~i~~--D~l~HaSiidG~rlS~a~~~~--f~HnD~~~Le~~L~~~~~~~~-~~IvtEgVfSMdGd~apL 197 (410)
T PRK13392 123 LSTLARLLPNCLILS--DALNHASMIEGIRRSGAEKQV--WAHNDLADLERQLASVDPDRP-KLICFESCYSMDGDFAPM 197 (410)
T ss_pred HHHHHCCCCCCEEEE--CCCCCHHHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCCCCH
T ss_conf 999827799979998--731228899878755895899--718998999999975666785-599972531247886899
Q ss_pred EE--EECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf 03--502568614886401101102---------545-568579997001200176651544567788876541144577
Q gi|254780153|r 155 VG--FIPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 155 ~~--~~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391)
.+ .+++++++.++||=.=++|.. .+. ..++|++..+-.|+||+-.| +|+.|++.++-.....
T Consensus 198 ~~l~~L~~~y~a~L~VDeAH~~GvlG~~GrG~~e~~g~~~~vdi~~gTlsKA~Gs~Gg--fv~gs~~~id~l~~~a---- 271 (410)
T PRK13392 198 AAICDLAEKYNAFTYVDEVHAVGLYGPRGGGIAERDGLMDRIDMFQGTLSKAFGCLGG--YIAASADLVDFVRSFA---- 271 (410)
T ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCE--EEECCHHHHHHHHHHC----
T ss_conf 9999999984959996131002413589987799728987667998506541236760--3423737789998738----
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 8312320011232103347864466-644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINT-PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~T-P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
+...+.| .|-..+.+...+|+.+.++ +...++..++...+++.+...++ ... +
T Consensus 272 ------------------r~~IfStalpP~~~aa~~~al~~l~~~---~~~r~~L~~~~~~lr~~l~~~g~-~~~---~- 325 (410)
T PRK13392 272 ------------------PGFIFTTALPPPVVAGARAALRHLKTS---QWERDAHQDRTASLKAKLNANGI-PVL---P- 325 (410)
T ss_pred ------------------CCCCCCCCCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CCC---C-
T ss_conf ------------------754366678999999999999998719---58899999999999999986799-848---9-
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 03653178982473101137345678889999988-862828726655676750---56861588899999999999999
Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
..|+ ++++.+.++.. ...+...| .+.|+.+..-.|+.++++ +||+.....+++||+.|+++|..
T Consensus 326 s~s~-Iipi~ig~~~~-----------a~~~~~~ll~e~Gi~v~~i~~PtVP~g~~rLRi~lsA~Ht~~dId~l~~~L~~ 393 (410)
T PRK13392 326 SPSH-IVPVMVGDPEK-----------CKAISDLLMAEHGIYIQPINYPTVPRGTERLRITPSPLHTDEDIDALVAALVA 393 (410)
T ss_pred CCCC-EEEEEECCHHH-----------HHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9998-79999799999-----------99999999875998998678883799974498775866899999999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780153|r 378 VFYFQK 383 (391)
Q Consensus 378 ~~~~~k 383 (391)
+..+..
T Consensus 394 v~~e~g 399 (410)
T PRK13392 394 IWRELA 399 (410)
T ss_pred HHHHCC
T ss_conf 999809
No 52
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.42 E-value=1.6e-10 Score=86.21 Aligned_cols=294 Identities=11% Similarity=0.044 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEEC----CC
Q ss_conf 999999999996889985799974873489998753205789707997-0736888887653238763067405----77
Q gi|254780153|r 50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTA----PY 124 (391)
Q Consensus 50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~----~~ 124 (391)
+.+-.+.+.++++.- .+++..|+|.++-|+++.+.++||.+++. +.+++.--+.+.+ +..+..+.. .+
T Consensus 64 i~~f~~~la~flg~D----~~rlvnGar~g~qAv~~a~c~~GD~VIl~rnaHyS~~~A~ela---G~~~~~v~~~~~~~~ 136 (386)
T PRK09331 64 IADFHEDLAKFLGMD----EARVTPGAREGKFAVMHALCKKGDYVVLDGLAHYTSYVAAERA---GLNVREVPKTGYPDY 136 (386)
T ss_pred HHHHHHHHHHHHCCC----EEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHC---CCEEEEECCCCCCCC
T ss_conf 899999999984996----3785288427899999986369997984484059999999975---985899368777234
Q ss_pred CCCCC--HHHC-------CCCCCE-EEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEEC
Q ss_conf 76578--6767-------855657-997420242022032035--0256861488640110110254556--85799970
Q gi|254780153|r 125 GSLPD--FSKV-------DFDRDV-VFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFS 190 (391)
Q Consensus 125 g~~~~--~~~~-------~~~~~v-~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~ 190 (391)
+..+. .+.+ ...+.+ .++|.+=+-|...+...+ +||.++.++++|+.=+.+-+|++.. +.|+++.|
T Consensus 137 ~I~~~~~~~~Iee~~~e~gk~~aL~llt~pdy~yGn~~d~~~i~~iah~~~ip~lvdeA~~~~~~P~~a~~~GaD~~v~S 216 (386)
T PRK09331 137 RITPEAYAEKIEEVEDETGKPPALALLTHVDGNYGNLHDAKKIAKVAHQYGIPLLLNGAYTVGRMPVDGKELGADFIVGS 216 (386)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCEEEEE
T ss_conf 50800579999999986189855999968886644546389999999874981898144335778974666399889863
Q ss_pred CHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 01200176651544567788876541144577831232001123210334786446-66448899999999862010318
Q gi|254780153|r 191 AQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETIN-TPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 191 sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-TP~v~~i~al~~~l~~i~~~gGl 269 (391)
.+|-++.+.-.|++.++.+..++.-...+.. .-+.. ..-+.|-- -|...++.-+..+-+++
T Consensus 217 ~HK~~~s~t~sgvL~~~~e~~d~v~R~s~~~-~~Kev-----------~mLgcTs~g~psy~LMASfd~vrerv------ 278 (386)
T PRK09331 217 GHKSMAASAPSGVLATTEEYADKVFRTSKKF-GVKEV-----------ELLGCTLRGAPLVTLMASFPHVKERV------ 278 (386)
T ss_pred CCCCCCCCCCCEEEECCCCHHHHHHHCCCCC-HHHHH-----------HHHCCCCCCCHHHHHHHCCHHHHHHH------
T ss_conf 4544423463124430453015565226430-57899-----------88536334640899980659999999------
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCC
Q ss_conf 99999999779999999874797167668820036531789824731011373456788899999888628287266556
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYR 349 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r 349 (391)
+.|...-++++.+++.+.+..+++.+-..|. ....+.| ..+.++.....+.... -.+...|.+.|+..-..+
T Consensus 279 -~~~d~ev~~ar~~~~El~kIeG~~~lge~P~--~hdl~~f--dtt~~~~ia~~~~~~G-y~l~~~Lk~r~I~ge~sg-- 350 (386)
T PRK09331 279 -KNWDEEVEKARWFVDELEKIEGFKQLGEKPR--NHDLMRF--ETPSFDEIAKKHKRRG-FFLYEELKKRGIHGIKPG-- 350 (386)
T ss_pred -HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC--CCCCEEE--CCCCEEEEHHHCCCCC-EEHHHHHHHCCCEEEECC--
T ss_conf -8778999999999999860876554065778--7774353--3764122232048660-567999976796499557--
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 76750568615888999999999999999
Q gi|254780153|r 350 DAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 350 ~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
.-+.|-++.+|. +.|+++.|++|+..-
T Consensus 351 -~t~~lkl~s~G~-t~E~v~~li~A~keI 377 (386)
T PRK09331 351 -LTKEFKLSTYGL-TWEQVEYVADSFKEI 377 (386)
T ss_pred -CCEEEEEEECCC-CHHHHHHHHHHHHHH
T ss_conf -101787886178-789999999999999
No 53
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.42 E-value=4.2e-10 Score=83.58 Aligned_cols=290 Identities=15% Similarity=0.119 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEEE
Q ss_conf 8899999999999999968899857999748734899987532057897079970736888--88765323876306740
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREFT 121 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~~ 121 (391)
.+-.+.+++ .|..|=+... + +..+||-+|..+++++++++||.+++...-||.- .+....+.++..+...+
T Consensus 59 NPT~~~lE~---~lA~LEgg~~---a-~~~sSGmaAi~~~l~~ll~~GDhiv~~~~~YGgT~~l~~~~~~~~gi~~~~vd 131 (405)
T PRK08776 59 NPTRDLLGE---ALAELEGGAG---G-VITSTGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITAD 131 (405)
T ss_pred CHHHHHHHH---HHHHHHCCCC---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEC
T ss_conf 878999999---9999829996---8-99467999999999997389998998688611799999998754888999968
Q ss_pred CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCE---E--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf 57776578676785--56579974202420220320---3--502568614886401--101102545568579997001
Q gi|254780153|r 122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDV---G--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ 192 (391)
Q Consensus 122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~---~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ 192 (391)
.. +++.++. .+..-+++.||.+--...+. . .+++.+++++|||-+ |-+...|++. ++|+++-|.-
T Consensus 132 ~~-----d~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivihS~T 205 (405)
T PRK08776 132 LT-----DPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEF-GADLVLHSTT 205 (405)
T ss_pred CC-----CHHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEECC
T ss_conf 99-----98999974377765999988999988602759999999873997999799764002682652-7978999726
Q ss_pred HCCCCCCCC--EEEEECHHHHH-HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 200176651--54456778887-654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 193 KVLGGEAGF--GIIILSPASVE-RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 193 K~l~~ppGl--~~v~~s~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
|-|+|-..+ |.|+.++..+. +.. .+.. ..|. +++-+.-|.+...| ..+
T Consensus 206 Kyl~GHsDvl~G~vv~~~~~~~~~l~------------~~~~--------~~G~---~~sP~da~L~lRGL------kTL 256 (405)
T PRK08776 206 KYINGHSDVVGGAVVARDAALHQQLV------------WWAN--------ALGL---TGSPFDAFLTLRGL------RTL 256 (405)
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHH------------HHHH--------HCCC---CCCCHHHHHHHCCC------CCH
T ss_conf 04327865305622268889999999------------9998--------6088---88833578886457------889
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--------------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999779999999874797167668820--------------0365317898247310113734567888999998
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDET--------------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~--------------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
.-|.+||.+++..+-+|+++++..... ..|. ...-..++|.+.+.. ...+.+...
T Consensus 257 ~lRm~r~~~nA~~lA~~L~~hp~V~~V-~YPgL~shp~h~la~r~~~G~Ggm~Sf~l~~~~----------~~~~~f~d~ 325 (405)
T PRK08776 257 DARLRVHQENADAIAALLDGHAAVNQV-YFPGLASHPGHALAARQQKGFGAMLSFELEGGE----------AAVRAFVDG 325 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCCCHHHHHHCCCCCCCEEEEEECCHH----------HHHHHHHHH
T ss_conf 999999999999999999709896868-898888981678998648998652688845739----------999999980
Q ss_pred HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8862828726655676----------------------75-0568615888999999999999999999999877511
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLRAI 390 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~~~ 390 (391)
|.--..+..+|+.++. .. -+|+++| .||++.|++-|+.||++.++..+-++
T Consensus 326 l~lf~~a~SlGg~eSLi~~P~~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~~DLi~DL~qAL~~a~a~~~~~~ 399 (405)
T PRK08776 326 LRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVG----IESAEDLLIDLRAGLARAEAVLTAAA 399 (405)
T ss_pred CCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----CCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 883625215376541302775446645899999866989396999950----09999999999999999998875430
No 54
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.41 E-value=1.8e-09 Score=79.55 Aligned_cols=297 Identities=19% Similarity=0.157 Sum_probs=178.7
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH
Q ss_conf 89999863210365328988999999999999999688998579997487348999875320578970799707368888
Q gi|254780153|r 26 GWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW 105 (391)
Q Consensus 26 ~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~ 105 (391)
..|++++...+-. -||=|+-.. .+.++.+.+.++++.+ .|++ +.|++.++..++..++.+|+.+++..=+|+..
T Consensus 48 ~~v~~ai~~~~~~-~~~YPd~~~--~~Lr~aiA~~~~v~~~-~Ilv-~nGs~e~i~l~~~a~~~pgd~Vl~~~P~f~~Y- 121 (367)
T PRK02731 48 PKAIEAIRAAADE-LHRYPDGSG--FELKAALAEKFGVDPE-QIIL-GNGSDEILELLARAYLGPGDEVIYSEHAFAVY- 121 (367)
T ss_pred HHHHHHHHHHHHH-HCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCCHHHH-
T ss_conf 9999999987755-115959878--9999999999785811-1998-57899999999999847998644479862689-
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCCHHHC----C-CCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-HH
Q ss_conf 8765323876306740577765786767----8-55657997420242022032035---025-6861488640110-11
Q gi|254780153|r 106 MSDIRQLSLQDVREFTAPYGSLPDFSKV----D-FDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA-VF 175 (391)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs-~g 175 (391)
..+++..+..+..+... +...+++.+ . ..+.+.++.=..-||...+..+. +.. ..+.++|+|-+=. |.
T Consensus 122 -~~~a~~~G~~~~~vp~~-~~~~d~~~l~~~i~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vviDEaY~ef~ 199 (367)
T PRK02731 122 -PIAAQAVGAKPVEVPAK-DYGHDLDAMLAAVTPRTKLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYV 199 (367)
T ss_pred -HHHHHHCCCEEEEECCC-CCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHC
T ss_conf -99999829889995476-7765968999855878868998289999886575699999998545576388411267642
Q ss_pred HCC-----CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCC
Q ss_conf 025-----45-56857--9997001200176651--54456778887654114457783123200112321033478644
Q gi|254780153|r 176 ARH-----ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETI 245 (391)
Q Consensus 176 ~~p-----~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (391)
..+ ++ ..+.+ ++.-+.-|.++. ||+ |.++.+++.++.+.+.+. +
T Consensus 200 ~~~~~~~~~~l~~~~~n~iv~rSfSK~~gl-aGlRlGy~ia~~~~i~~l~~~~~-------------------------p 253 (367)
T PRK02731 200 ARKDYEDGIELVKEFPNVVVTRTFSKAYGL-AGLRVGYGIAPPEIIDALNRVRQ-------------------------P 253 (367)
T ss_pred CCCCCCCHHHHHHHCCCEEEEEECCHHHCC-CCCCEEEEECCHHHHHHHHHHHC-------------------------C
T ss_conf 576665589997623764799746666516-88705888669999999999847-------------------------6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHH
Q ss_conf 6664488999999998620103189999999977999999987479716766882003653178-982473101137345
Q gi|254780153|r 246 NTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINS 324 (391)
Q Consensus 246 ~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~ 324 (391)
++-++....+...+|+ ++.-++...+..++..+.+++.++..+ +..+. |.++.. ++++++.
T Consensus 254 ~~v~~~aq~aa~aaL~---d~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p------s~~nFil~~~~~~~-------- 315 (367)
T PRK02731 254 FNVNSLALAAAVAALD---DDAFVEKSRELNAKGMARLEEFLAELG-LEYIP------SYGNFILVDFDDGK-------- 315 (367)
T ss_pred CCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC------CCCEEEEEECCCCC--------
T ss_conf 6588999999999966---999999999999999999999999784-98878------98618999889999--------
Q ss_pred HHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 67888999998886282872665-5676750568615888999999999999999999
Q gi|254780153|r 325 QKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 325 ~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
....+...|.++|+++.-+. +. ....+||+.+ ++++.++|+++|+..+.+
T Consensus 316 ---~a~~~~~~L~~~gI~vr~~~~fg-l~~~~Risig---t~een~~li~al~~~l~e 366 (367)
T PRK02731 316 ---DAAAIYEALLKRGVIVRPLAGYG-LPNALRITIG---TPEENRRFLAALKEFLAQ 366 (367)
T ss_pred ---CHHHHHHHHHHCCEEEEECCCCC-CCCEEEEEEC---CHHHHHHHHHHHHHHHHH
T ss_conf ---99999999996893898588889-9896999928---999999999999999850
No 55
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.41 E-value=4.2e-10 Score=83.63 Aligned_cols=287 Identities=14% Similarity=0.099 Sum_probs=173.0
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..|=+.. .+ +..+||-+|+.+++++++++|+.+++...-||.- .++......+.+++..
T Consensus 59 ~NPT~~~lE~~l---a~LEgg~---~a-~~~~SGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~v 131 (394)
T PRK09028 59 GTPTHFAFQAAI---AELEGGA---GT-ALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILAGFGIETTYY 131 (394)
T ss_pred CCHHHHHHHHHH---HHHHCCC---CE-EEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 887799999999---9981998---77-9845999999999999847998787069986277999998886567479995
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.+.++. .+...+++.||.+--.+.+.. .+++++++++|||-+ +-+...|++. ++|+++-|.
T Consensus 132 d~~-----~~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~ 205 (394)
T PRK09028 132 DPM-----IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEM-GVDISIQAA 205 (394)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHCCCCHHC-CCCEEEEEC
T ss_conf 799-----98999853687726999955899875236899999999983987996376431220682120-798899827
Q ss_pred HHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 120017665--154456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-|+|-+- .|.++.+++.+++..... . ..|. +++-+..|.+...| ..+
T Consensus 206 TKyi~GHsDv~~G~v~~~~~~~~~l~~~~---------------~-----~~G~---~~sP~~a~L~lRGL------~TL 256 (394)
T PRK09028 206 TKYIVGHSDVMLGTATANEKHWDQLREQS---------------Y-----LMGQ---CTSPDDVYLAARGL------RTL 256 (394)
T ss_pred CCEECCCCCCCCEEEECCHHHHHHHHHHH---------------H-----HHCC---CCCHHHHHHHHHCC------CCH
T ss_conf 70104887740316746889999999999---------------8-----7167---78878999998367------859
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676688200--------------365317898247310113734567888999998
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
.-|.+||.+++..+-+|+++++..... ..|.. -....+.|.+++... + ..+.+...
T Consensus 257 ~lRm~r~~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~h~la~r~~~g~gg~~sf~l~~g~~-----~----~~~~f~~~ 326 (394)
T PRK09028 257 GVRLAQHEKNALKVANWLATRPEVDHL-RHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDP-----K----AVTALVEG 326 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH-----H----HHHHHHHH
T ss_conf 999999999999999998609998789-8889988944899998677998699999816999-----9----99999984
Q ss_pred HHHCCEEECCCCCCCC------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676------------------75-05686158889999999999999999999998
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
|.--..+..+|+.++. .. -+|++++ .||++.|++-|+.||++..+-
T Consensus 327 L~lf~~a~SlGg~eSLi~~p~~~~~~~~~~~~~~~~~lvRlSVG----lEd~eDLi~DL~qAL~k~~a~ 391 (394)
T PRK09028 327 MQHFKMGFSWGGFESLILGPFGINKLRTATNWDFSKPLIRLHIG----LEDVDDLIADLEAGFERYNAV 391 (394)
T ss_pred CCCCEEEECCCCCCCEEECCCCCCCHHHHHCCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHHHHH
T ss_conf 88275711689875407888876742232035899997999941----099899999999999985556
No 56
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.40 E-value=4.2e-10 Score=83.58 Aligned_cols=290 Identities=17% Similarity=0.178 Sum_probs=175.4
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+-+... + +..+||.+|+.+++++++++|+.+++...-||. ++.+......+..++.+
T Consensus 63 ~nPT~~~lE~~l---a~LEg~~~---a-~~~sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgt~~l~~~~l~~~Gi~~~~v 135 (403)
T PRK07503 63 SNPTLALLEQRM---ASLEGGEA---G-LALASGMGAITATLWTLLRPGDEVIVGRTLYGCTFAFLHHGLGEFGVKVRHV 135 (403)
T ss_pred CCHHHHHHHHHH---HHHHCCCE---E-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 885699999999---99849964---8-8862789999999999659999899768875328999984463177599986
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC---EE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--5657997420242022032---03--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD---VG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~---~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+. .+++.++. .+...+++.||.+--...+ .. .+++.++++++||-+ +-+...|++. ++|+++-|.
T Consensus 136 d~-----~d~~~~~~ai~~~Tkli~~Etp~NP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~ 209 (403)
T PRK07503 136 DL-----TDAKALKAAISEKTRMIYFETPANPNMQLVDIAAVVEAARGHDALVVVDNTYCTPYLQRPLEL-GADLVVHSA 209 (403)
T ss_pred CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHC-CCCEEEEEC
T ss_conf 89-----898999975186732999952799986630579999999865885998367545140161331-898899954
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-++|-+.+ |.|+.+++.+.+.... .+.. ..|. +++-+..|.+...| ..+
T Consensus 210 TKYi~GHsD~l~G~v~~~~~~~~~~r~~----------~~~~--------~~G~---~lsP~da~L~lRGL------~TL 262 (403)
T PRK07503 210 TKYLSGHGDITAGLVVGGKALVDRIRLE----------GLKD--------MTGA---VLSPHDASLLMRGL------KTL 262 (403)
T ss_pred CEEECCCCCEEEEEEECCHHHHHHHHHH----------HHHH--------CCCC---CCCHHHHHHHHCCC------CCH
T ss_conf 5031378760557997261788999999----------9987--------4288---68868889986467------759
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
.-|.+||.+++..+-+|+++++..... ...|.+ .....+.|.++... +. .+.+...|
T Consensus 263 ~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~q~~g~gg~~sf~l~g~~------~~----~~~f~~~L 332 (403)
T PRK07503 263 ALRMDRHCANAQQVAEFLARQPAVELVHYPGLPSFAQHALAQRQMRLPGGMIAFELKGGI------EA----GRRFMNAL 332 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------HH----HHHHHHHC
T ss_conf 999999999999999999748995589898888980189999867899836899966989------99----99999808
Q ss_pred HHCCEEECCCCCCCCC----------------------C-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8628287266556767----------------------5-056861588899999999999999999999987
Q gi|254780153|r 337 EKEEIAYDIGSYRDAP----------------------L-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF 386 (391)
Q Consensus 337 ~~~g~~~~~~~~r~~~----------------------~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~ 386 (391)
.--..++.+|+..+.- . -+|++++ .||++.|++-|+.||...|+..
T Consensus 333 ~lf~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~~DLi~DL~qAL~a~k~~~ 401 (403)
T PRK07503 333 QLFARAVSLGDAESLAQHPASMTHSTYTPEERAHHGISEGLVRLSVG----LEDVEDLLADIAQALDACKVPA 401 (403)
T ss_pred CCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHHHHHC
T ss_conf 94655316677540324763346655999999866989396999860----1899999999999999730201
No 57
>PRK09105 putative aminotransferase; Provisional
Probab=99.40 E-value=3.4e-09 Score=77.85 Aligned_cols=294 Identities=14% Similarity=0.144 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391)
|. +++++...+- ..||=|+ .-..+.++.|.+.++++.+ .|++. .|++..++.++.-++++|+.+++..-.|+..
T Consensus 62 p~-v~~Ai~~~~~-~~~rYPd--~~~~~Lr~~lA~~~gv~~~-~I~~g-nGSdE~i~~l~~af~~~g~~vv~~~Ptf~~Y 135 (374)
T PRK09105 62 AA-ARAAAARSAA-LSGRYLF--EMQDELRTLFAAQLGLPVD-HLHAY-AGSSEPLNYAVLAFTSPEAGLVTADPTYEAG 135 (374)
T ss_pred HH-HHHHHHHHHH-HCCCCCC--CCHHHHHHHHHHHHCCCHH-HEEEE-CCHHHHHHHHHHHHHCCCCEEEECCCCHHHH
T ss_conf 99-9999997652-4577989--8689999999999785902-49993-6999999999999807998689588877999
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEE--EC--CCCCCEEEEEECC-HHH
Q ss_conf 88765323876306740577765786767----855657997420242022032035--02--5686148864011-011
Q gi|254780153|r 105 WMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGF--IP--ESREGLVICDATS-AVF 175 (391)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~--~~--~~~~~llivD~vS-s~g 175 (391)
...++..+..+..+........+++.+ +..+.+.+|.=..-||...+..++ ++ ...+.++|+|-.= .|.
T Consensus 136 --~~~a~~~g~~v~~vpl~~d~~~dl~~l~~~~~~tklv~l~nPNNPTG~~~~~~el~~~~~~~~~~~lvvvDEAY~ef~ 213 (374)
T PRK09105 136 --WRAADAQGAKVIKVPLRADGAHDVRAMLAADPNAGLIYICNPNNPTGSVTPRADIEWLLAHKPAGSVVLVDEAYIHFS 213 (374)
T ss_pred --HHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHC
T ss_conf --999998297799986165558586889735789878997889999876579999999997189881899862676625
Q ss_pred HCC--CCC-CCC-EEEEE-CCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 025--455-685-79997-001200176651--54456778887654114457783123200112321033478644666
Q gi|254780153|r 176 ARH--IDF-NKL-DVVTF-SAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP 248 (391)
Q Consensus 176 ~~p--~d~-~~i-Dv~~a-~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP 248 (391)
..+ ++. .+. ++++. +.-|.+| -+|+ |.++.+++.++++... ..|..
T Consensus 214 ~~~s~~~l~~~~~NvivlRTfSKayg-LAGlRvGY~ia~~~li~~l~~~--------------------------~~~~~ 266 (374)
T PRK09105 214 DAPSVVDLVAQRKDVVVLRTFSKLYG-MAGMRLGLAAARPDLLAKLARF--------------------------GGNPL 266 (374)
T ss_pred CCCCCHHHHHCCCCEEEEEHHHHHHC-CCCCCCCHHHCCHHHHHHHHHC--------------------------CCCCC
T ss_conf 78643256742898899822237626-6510022310899999999735--------------------------88988
Q ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCCCCCCCCHHHHHH
Q ss_conf 44889999999986201031899999999779999999874797167668820036531789-82473101137345678
Q gi|254780153|r 249 SLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDSDIASLDINSQKS 327 (391)
Q Consensus 249 ~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~~~~~~~~~~~~~ 327 (391)
++....+...+|+ .+.-++...+...+..+.+.+++...+ +..+ -|.+|..+ .+..+
T Consensus 267 ~~~a~aaa~aaL~---d~~~~~~~~~~~~~~R~~l~~~L~~~g-~~~~------pS~aNFil~~~~~~------------ 324 (374)
T PRK09105 267 PVPAAAAGLASLR---DPKLVPQRRAQNAAVREDTIAWLRKQG-YACT------PSQANCFMVDVKRP------------ 324 (374)
T ss_pred CHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEEECCCC------------
T ss_conf 7999999999962---999999999999999999999999783-9589------98785799955999------------
Q ss_pred HHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 88999998886282872665567675056861588899999999999999999
Q gi|254780153|r 328 FCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 328 ~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.+.+...|.++|++++- .+...+..+||+.+ ++++.++++++|+.+++
T Consensus 325 -a~~~~~~L~~~gIlV~r-~~~~~~~~lRISiG---t~een~~fl~AL~evL~ 372 (374)
T PRK09105 325 -AEVFADAMAKQGVFIGR-SWPIWPNWVRVTVG---TEEEMAAFRSAFAKVMR 372 (374)
T ss_pred -HHHHHHHHHHCCEEEEC-CCCCCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf -99999999969979937-99988997999469---99999999999999866
No 58
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.39 E-value=3.1e-09 Score=78.12 Aligned_cols=327 Identities=13% Similarity=0.121 Sum_probs=177.3
Q ss_pred CCCC-CCCCCCCCC---CHHHHHHHHHHHCC-CCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHH
Q ss_conf 9988-868887768---96899998632103-65328---988999999999999999688998-579997487348999
Q gi|254780153|r 11 PKRP-FFSSGPCAK---RPGWSLGILEGALL-GRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVE 81 (391)
Q Consensus 11 p~~~-~F~pGP~~~---~p~~v~~~~~~~~l-~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~e 81 (391)
|.+| +||-|=.-. .|..+ ++++...+ +-+|+ +.=..++=+.+-+.+++.++++-| -+-++++.|+..++.
T Consensus 38 ~~~~id~~~G~pD~~~PtP~~i-~~~~~~~~~~g~~~Yt~~~G~~eLReAia~~~~~~~g~~~d~~d~Iivt~G~~~al~ 116 (406)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGSL-ELFSQGVERGGVQAYTEYRGDLEIRELVAARLAEFTGAPVDARDGLIITPGTQGALF 116 (406)
T ss_pred CCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH
T ss_conf 9997237889999999986999-999999973899889998672999999999999986899998786998587799999
Q ss_pred HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE------CCCCCCCCHHHCCC-----CCCEEEEEEECCCCE
Q ss_conf 8753205789707997073688888765323876306740------57776578676785-----565799742024202
Q gi|254780153|r 82 MALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT------APYGSLPDFSKVDF-----DRDVVFVWNGTTSGV 150 (391)
Q Consensus 82 a~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv 150 (391)
.++.-++.+||.+++..=+|... ...+...++ .+..+. .+.+...++++++. .+.+.++.=..-||.
T Consensus 117 ~a~~al~~pGDeViv~~P~y~~y-~~~i~~~g~-~~vpv~l~~~~~~~~~~~~d~d~le~~i~~~tk~iil~nP~NPTG~ 194 (406)
T PRK06207 117 LAVASTVTRGDKVAIVQPDYFAN-RKLVEFFEG-EIVPVQLDYVSVDETRAGLDLDQLEAAFKAGVRVFLFSNPNNPAGV 194 (406)
T ss_pred HHHHHHCCCCCEEEEECCCCCCH-HHHHHHCCC-EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCH
T ss_conf 99999758998799978987457-999998298-7999856776776344689999999745448769998899798572
Q ss_pred EECCEE-----EECCCCCCEEEEEECCHHH---H--------CCCCCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHH
Q ss_conf 203203-----5025686148864011011---0--------254556857999700120017665--154456778887
Q gi|254780153|r 151 CVPDVG-----FIPESREGLVICDATSAVF---A--------RHIDFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVE 212 (391)
Q Consensus 151 ~~~~~~-----~~~~~~~~llivD~vSs~g---~--------~p~d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~ 212 (391)
..+..+ .+|..++..+|.|-+=+-. + .+.+.+++ +.+.|.-|.++ .|| +|.++.++..++
T Consensus 195 v~s~e~l~~l~~la~~~~i~visDEiY~~l~ydg~~~~~~~~~~~~~~~~-I~~~s~SK~~~-m~G~RlG~~~~~~~li~ 272 (406)
T PRK06207 195 VYSPEEIAQIAALARRYGATVIADQLYSRLRYAGASYTHLRALAVDPENV-ITIMGPSKTES-LSGYRLGVAFGSPAIIA 272 (406)
T ss_pred HCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCE-EEEEECHHHHH-CCCCCEEEEECCHHHHH
T ss_conf 13399999999987557959999646645455898877876635776767-99751324431-22562488978999999
Q ss_pred HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 65411445778312320011232103347864466644889999999986201031899999999779999999874797
Q gi|254780153|r 213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW 292 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~ 292 (391)
+....+.. ....++ ...-.++..+++.- ++-++.+.++++++...+.+.+...++
T Consensus 273 ~~~~~~~~----------------------~~~~~~-~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~R~~l~~~l~~~~g 327 (406)
T PRK06207 273 RMEKLQAI----------------------VSLRAA-GYCQAVLRTWFDEP--PGWMEDRIAQHQAIRDDLIRVLRGIDG 327 (406)
T ss_pred HHHHHHHH----------------------HCCCCH-HHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999988----------------------436842-99999999999677--999999999999999999999850899
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC--CCCCCCEEEEECCCCCCHHHHH
Q ss_conf 16766882003653178982473101137345678889999988-86282872665--5676750568615888999999
Q gi|254780153|r 293 IENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS--YRDAPLGLRVWVGVTVEKEDLL 369 (391)
Q Consensus 293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~--~r~~~~~~RIg~~g~i~~~dv~ 369 (391)
.....++-.+ -+-..+++-. .+ ..++...| .+.|+++--|. +...+..+|++.- .+.+++.
T Consensus 328 ~~~~~P~gg~----yl~~~l~~~~---~~-------~~~f~~~Ll~e~gVav~PG~~FG~~~~~~vRlsfa--~~~e~l~ 391 (406)
T PRK06207 328 VFARAPEAGS----YLFPRLPKLA---VG-------LADFVKILRLQAGVVVTPGTEFSPHTADSIRLNFS--QDHAAAV 391 (406)
T ss_pred CEECCCCCEE----EEEEECCCCC---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHH
T ss_conf 5745899148----9968888889---99-------99999999985899998865658999897999973--9899999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780153|r 370 LLCDWLRWVFYFQK 383 (391)
Q Consensus 370 ~L~~aLe~~~~~~k 383 (391)
.-++-|..++++.|
T Consensus 392 eal~RL~~~l~~yr 405 (406)
T PRK06207 392 AAVERIAALIERYR 405 (406)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999855
No 59
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.38 E-value=1.2e-09 Score=80.78 Aligned_cols=285 Identities=15% Similarity=0.145 Sum_probs=168.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++. |..+-+... + ++.+||-+|+.+++++++++|+.+++...-||. +.++......+.++...
T Consensus 50 gnPT~~~lE~~---la~LEg~~~---a-~~~~SGMaAis~~l~~~l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gi~v~~~ 122 (386)
T PRK08045 50 GNPTRDVVQRA---LAELEGGAG---A-VLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV 122 (386)
T ss_pred CCHHHHHHHHH---HHHHHCCCC---E-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf 88669999999---999809983---7-9856789999999997079999899837863489999998720795799996
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.+.++. .....+++.||.+--...+.. .+++++++++|||-+ |-++..|++. ++|+++-|.
T Consensus 123 d~~-----d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~g~~~vvDNT~atP~~~~Pl~~-GaDivvhS~ 196 (386)
T PRK08045 123 DQG-----DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLAL-GADLVLHSC 196 (386)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCHHCCCCCCC-CCCEEEEEC
T ss_conf 999-----98999975377855999977999876105769999999976998998275232311273003-887899966
Q ss_pred HHCCCCCCCC--EEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 1200176651--5445677-888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG 268 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG 268 (391)
-|-++|-..+ |.|+.++ +...+... +. . ..| .+++-+..|.+...| ..
T Consensus 197 TKyi~GhsD~l~G~vv~~~~~~~~~~~~------------~~---~-----~~G---~~~~p~~a~l~~rGL------~T 247 (386)
T PRK08045 197 TKYLNGHSDVVAGVVIAKDPEVVTELAW------------WA---N-----NIG---VTGGAFDSYLLLRGL------RT 247 (386)
T ss_pred CEEECCCCCCEEEEEEECCHHHHHHHHH------------HH---H-----HHC---CCCCHHHHHHHHHCC------CC
T ss_conf 6130588772348998177889999999------------99---9-----858---778988999998368------87
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCC--------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8999999997799999998747971676-----68820--------0365317898247310113734567888999998
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQENDWIENL-----AVDET--------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~--------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
+.-|.+||.+++..+-+++++++..... ...|. ......+.|.+.... ...+.+...
T Consensus 248 L~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~~q~~g~Ggm~sf~l~g~~----------~~~~~f~~~ 317 (386)
T PRK08045 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDE----------QTLRRFLGG 317 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCH----------HHHHHHHHH
T ss_conf 7889999999999999998639985379899998995779999708999735799965979----------999999970
Q ss_pred HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676----------------------75-056861588899999999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
|.--..++.+|+.++. .. -+|++++ .||++.|++-|+.||+...
T Consensus 318 l~lf~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~eDLi~DL~qAL~aa~ 384 (386)
T PRK08045 318 LSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG----IEDGEDLIADLENGFRAAN 384 (386)
T ss_pred CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHHC
T ss_conf 883556026688640003764235656899999866989596999960----0999999999999999850
No 60
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.38 E-value=3.5e-09 Score=77.75 Aligned_cols=302 Identities=15% Similarity=0.110 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391)
|. +++++...+-+.-||=|+-.. .+.++.|.+.++++.+ +|++ +.|++.++..++..++++|+.+++..=.|+..
T Consensus 40 p~-v~~a~~~~~~~~~~~YPd~~~--~~Lr~~iA~~~gv~~~-~I~v-g~Gs~e~i~~~~~~~~~~gd~Vl~p~Pty~~Y 114 (353)
T PRK05387 40 PK-VLEAIRAALGDDLRLYPDPDA--TALRQAIAAYYGVSPE-QVFV-GNGSDEVLAHAFLAFFKHDRPLLFPDITYSFY 114 (353)
T ss_pred HH-HHHHHHHHHHHHHCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH
T ss_conf 99-999999967525247999978--9999999999786858-8998-57899999999999618998664078770369
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCHHHCC-CCCCEEEEEEECCCCEEECCEE---EECCCCCCEEEEEECC-HHHHCC-
Q ss_conf 887653238763067405777657867678-5565799742024202203203---5025686148864011-011025-
Q gi|254780153|r 105 WMSDIRQLSLQDVREFTAPYGSLPDFSKVD-FDRDVVFVWNGTTSGVCVPDVG---FIPESREGLVICDATS-AVFARH- 178 (391)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~v~~~h~ETstGv~~~~~~---~~~~~~~~llivD~vS-s~g~~p- 178 (391)
...++..+..+..+........+++++. ..+.+.+++=..-||...+..+ ++...++.++|+|-.= .|+...
T Consensus 115 --~~~a~~~g~~~~~vp~~~~~~~~~~~~~~~~~~v~l~nPnNPTG~~~~~~~l~~ll~~~~~~~vvvDEAY~ef~~~s~ 192 (353)
T PRK05387 115 --PVYAGLYGIPYEEVPLDDDFSIDVEDYLRPNGGIIFPNPNAPTGIALPLADIERILAANPDSVVVIDEAYVDFGGESA 192 (353)
T ss_pred --HHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHCCCCCH
T ss_conf --999998095489950564345799997263676998489998788689999999997489988996053564187540
Q ss_pred CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 45-56857--9997001200176651--5445677888765411445778312320011232103347864466644889
Q gi|254780153|r 179 ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCI 253 (391)
Q Consensus 179 ~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i 253 (391)
++ ..+.+ ++.-+--|.+| -||+ |+++.+++.++.+.+.+... .+++-+....
T Consensus 193 ~~l~~~~~nlivlrTfSK~~g-laGlRlGy~ia~~~li~~l~~~~~~~----------------------~~~~v~~~a~ 249 (353)
T PRK05387 193 IPLIDRYPNLLVVQTLSKSRS-LAGLRVGFAIGHPELIEALERVKNSF----------------------NSYPLDRLAQ 249 (353)
T ss_pred HHHHHCCCCEEEEEECCHHHC-CCCCCCEEEECCHHHHHHHHHHHHHC----------------------CCCCCCHHHH
T ss_conf 245650787787630416308-77662342106999999999998541----------------------6777669999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999998620103189999999977999999987479716766882003653178982473101137345678889999
Q gi|254780153|r 254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSML 333 (391)
Q Consensus 254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 333 (391)
.+...+|+ .+.=++...++..+..+.+.+.+.+.+ +..+ -|.+|..+. ..+.. ..+.+.
T Consensus 250 ~aa~aal~---d~~~~~~~~~~~~~~R~~l~~~L~~lg-~~v~------ps~anFvl~-~~~~~----------~a~~~~ 308 (353)
T PRK05387 250 AGAIAAIE---DEAYFEETCAKVIATRERLVEELEALG-FEVL------PSAANFVFA-RHPQH----------DAAALA 308 (353)
T ss_pred HHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEE-ECCCC----------CHHHHH
T ss_conf 99999963---859999999999999999999999689-8789------898858999-89999----------999999
Q ss_pred HHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98886282872665567675056861588899999999999999999
Q gi|254780153|r 334 SFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 334 ~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
..|.++|+.+.-........-+||+.+ ++++.++|+++|+.+++
T Consensus 309 ~~L~~~gI~VR~~~~~~l~~~iRisvg---t~een~~l~~al~~il~ 352 (353)
T PRK05387 309 AALRERGIIVRHFNKPRIDQFLRITIG---TDEECEALVDALKEILA 352 (353)
T ss_pred HHHHCCCEEEEECCCCCCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf 999809939997998999998999729---99999999999999974
No 61
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.37 E-value=1.4e-09 Score=80.29 Aligned_cols=314 Identities=11% Similarity=0.025 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 689999863210----3653289889999999999999996889985799974873489998753205789707997073
Q gi|254780153|r 25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391)
Q Consensus 25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391)
|..+++++.+.+ .++++ +.=..++-+.+.+.+++-++.+=+-+=++++.|++.++..++..++++||.+++.+=.
T Consensus 46 p~~i~~a~~~~~~~~~~~Y~~-~~G~~~LR~aia~~~~~~~g~~v~~d~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~ 124 (389)
T PRK05764 46 PEHIKEAAIAALDEGKTKYTP-AAGIPELREAIAEKLKRDNGLDYEPDQIIVTTGAKQALYNAFMALLNPGDEVIIPAPY 124 (389)
T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 899999999998479999989-9887999999999999986899857978988887999999999958999989985786
Q ss_pred HHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEE
Q ss_conf 688888765323876306740--57776578676785-----5657997420242022032035-----02568614886
Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVIC 168 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~lliv 168 (391)
|..- ...+...+ ..+..+. .+.+..+++++++. .+.+.++.=..-||...+..+. +|..++.++|.
T Consensus 125 Y~~y-~~~~~~~g-~~~v~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~~a~~~~i~ii~ 202 (389)
T PRK05764 125 WVSY-PEMVKLAG-GKPVFVPTGEENGFKLTPEQLEAAITPKTKALILNSPSNPTGAVYSKEELEAIADVAVEHDIWVLS 202 (389)
T ss_pred CHHH-HHHHHHCC-CEEEEECCCHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 2458-99999649-865550436220876899999986384664999889989988675779999999998863532751
Q ss_pred EECCH---HHHCC-C-------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 40110---11025-4-------556857999700120017665--15445677888765411445778312320011232
Q gi|254780153|r 169 DATSA---VFARH-I-------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 169 D~vSs---~g~~p-~-------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
|-+=+ +.+.+ . ++.+--+.+.|.-|.++ -|| +|.++..++.+++....+.
T Consensus 203 DEiY~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-lpGlRiG~~i~~~~li~~~~~~~~---------------- 265 (389)
T PRK05764 203 DEIYEKLVYDGFEFTSIASLSPELFDRTITVNGFSKAYA-MTGWRLGYAAGPKELIKAMSKLQS---------------- 265 (389)
T ss_pred ECCCCCCCCCCCCCCCHHHHCCHHHCCCEEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH----------------
T ss_conf 013435556898888877849012114314314430247-866036999829999999999985----------------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391)
.+...+++..-++...+|+.-. .-++...+.++++.+.+.+.++..+++.... |+ +..-+-+.++..
T Consensus 266 -------~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~--P~--G~~~~~~~~~~~ 332 (389)
T PRK05764 266 -------QSTSNPTSIAQYAAIAALTGPQ--DAVEEMRKAFEERRDLMVDGLNEIPGLECPK--PE--GAFYVFPNVSKG 332 (389)
T ss_pred -------HCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECC--CC--CCEEEEEECCCC
T ss_conf -------4147898699999999985978--7899999999999999999998489988647--88--107995888888
Q ss_pred CCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 10113734567888999998-886282872665567675056861588899999999999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSF-LEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
.. . ...+... +.+.|+++--|..=..+.-||++.. .++++++.-++-|+.++++.|
T Consensus 333 ~~------~----~~~~~~~ll~~~gV~~~PG~~Fg~~g~~Rl~fa--~~~e~l~ea~~RL~~~l~~lk 389 (389)
T PRK05764 333 IT------D----SEDFAEALLEEAGVAVVPGIAFGAPGYVRLSYA--TSLEDIEEALERIERFLKSLK 389 (389)
T ss_pred CC------C----HHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 99------9----999999999819999980732489984999983--889999999999999999758
No 62
>PRK07505 hypothetical protein; Provisional
Probab=99.37 E-value=2e-09 Score=79.27 Aligned_cols=307 Identities=15% Similarity=0.129 Sum_probs=170.4
Q ss_pred CCCCCCHHHHHHHHHHHCC------CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC----
Q ss_conf 8776896899998632103------653289889999999999999996889985799974873489998753205----
Q gi|254780153|r 19 GPCAKRPGWSLGILEGALL------GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---- 88 (391)
Q Consensus 19 GP~~~~p~~v~~~~~~~~l------~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---- 88 (391)
|=+. +|+ |++++..++- +-|.|..-..+++.+..+.|.++++. + +++. .||..+.-+++-.|.
T Consensus 61 GL~~-hp~-v~~aa~~a~~~yG~g~~~s~~~~g~~~~h~~LE~~LA~~~g~-e---al~f-~sg~~An~g~i~~Lasg~~ 133 (405)
T PRK07505 61 GLDN-HPA-IIDGAVDALRRTGVLDLSSSRTRVQSQILKDLEESLSELFGA-S---VLTF-TSCSAAHLGILPLLASGHL 133 (405)
T ss_pred CCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-C---EEEE-CCHHHHHHHHHHHHHHCCC
T ss_conf 8889-999-999999999986889876486414839999999999987398-7---7987-3268999999999972222
Q ss_pred --CCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCCCCEEEEEEECCC--CEEECCEEE--ECC
Q ss_conf --789707997-073688888765323876306740577765786767-855657997420242--022032035--025
Q gi|254780153|r 89 --GYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFDRDVVFVWNGTTS--GVCVPDVGF--IPE 160 (391)
Q Consensus 89 --~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~v~~~h~ETst--Gv~~~~~~~--~~~ 160 (391)
++++..+.. ...++-...+-+ +... ..+...+......+++. +..+.+.++ .|+.- |-.-|..++ +++
T Consensus 134 ~~~~~~~ii~D~~~HaSl~~~~g~-~~s~--a~~~~f~HnD~~~Le~~~~~~~~~~iV-~EgVfSMGdiApL~~l~~L~~ 209 (405)
T PRK07505 134 TGGKPPHMVFDKYAHASLAILKGI-CADE--TEVETIDHNDLDALEDICKTNKRVAYV-ADGVYSMGGIAPVKELVDLQD 209 (405)
T ss_pred CCCCCCEEEEECCCCCCHHHHHHH-HCCC--CCEEEECCCCHHHHHHHHHHCCCCEEE-EEEEECCCCHHHHHHHHHHHH
T ss_conf 489987899987643784556677-5489--968986799999999987456994899-984255898345999999987
Q ss_pred CCCCEEEEEECCHHHHC----------CC--CCCCCEEEEECCHHCCCCCCCCEEEE-ECHHHHHHHHHCCCCCCCCCHH
Q ss_conf 68614886401101102----------54--55685799970012001766515445-6778887654114457783123
Q gi|254780153|r 161 SREGLVICDATSAVFAR----------HI--DFNKLDVVTFSAQKVLGGEAGFGIII-LSPASVERLEKYVPSWPLPKIF 227 (391)
Q Consensus 161 ~~~~llivD~vSs~g~~----------p~--d~~~iDv~~a~sQK~l~~ppGl~~v~-~s~~al~~~~~~~~~~~~~~~~ 227 (391)
++++.++||=.=++|.. .+ ..+++|++.++-.|+||+..| +|. -++...+-.... .
T Consensus 210 ~y~a~L~vDEAH~~Gv~G~~GrG~~~~~~~~~~~~~~i~~gTlsKA~Gs~GG--~V~~g~~~~~~~l~~~--a------- 278 (405)
T PRK07505 210 KYGLFVYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIATSLGKAFGASGG--VIMLGYAEQIRLILRY--A------- 278 (405)
T ss_pred HCCEEEEEECCCEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHCCCCE--EEEECCHHHHHHHHHH--C-------
T ss_conf 5676999965210012059997231687578888417998003210015615--9997859999999971--8-------
Q ss_pred HCCHHHHHHCCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 20011232103347864466--6448899999999862010318999999997799999998747971676688200365
Q gi|254780153|r 228 RMVKGGRVMEGLFCGETINT--PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSN 305 (391)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~T--P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~ 305 (391)
..+.|| +|...+.+...+++.+..+ -...+.++-+++.+.+...+.. .. ....++
T Consensus 279 --------------r~~ifStal~p~~~aa~~as~~i~~~~-e~~~~~~~L~~ni~~~~~~l~~----~~----~~s~~p 335 (405)
T PRK07505 279 --------------GPYAFSQPLNVAALGAISASAEIHLSS-ELDQLQQKLHNNIALFDSLIPT----EQ----SGSFLP 335 (405)
T ss_pred --------------CCHHCCCCCCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHCCC----CC----CCCCCC
T ss_conf --------------411136644799999999999998575-4799999999999999974587----77----899998
Q ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 3178982473101137345678889999988862828726655676750---5686158889999999999999999999
Q gi|254780153|r 306 TSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 306 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
++++.+.++. ....+...|.++|+.+..-.|+.++++ +||+.....+.+||+.|+++|+.++++.
T Consensus 336 -I~~v~ig~~~-----------~a~~~~~~L~e~Gi~v~~i~~PtVp~g~~rlRi~l~A~hT~edId~l~~~L~~v~~e~ 403 (405)
T PRK07505 336 -IRLIYIGDED-----------TAIKYAKQLKDAGFYTSPVFFPVVAKGNAGLRIMFRADHTNEEIKRLCSLLKEILADY 403 (405)
T ss_pred -EEEEEECCHH-----------HHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -7999949999-----------9999999999789018756388389798249987488899999999999999999985
No 63
>PRK03566 consensus
Probab=99.37 E-value=4e-09 Score=77.40 Aligned_cols=295 Identities=18% Similarity=0.162 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391)
|..+++++...+-. .||=|+-.. .+.++.|.+.++++.+ +|++ +.|++.++..++..++++|+.+++..-+|+..
T Consensus 47 ~~~v~~a~~~~~~~-~~~YPd~~~--~~Lr~aiA~~~gv~~~-~I~v-~~Gs~e~i~l~~~a~~~pGd~Vl~~~P~y~~Y 121 (365)
T PRK03566 47 SPKALEAIRAALSE-LHRYPDGNG--FELKAALAEKLGVPPE-QITL-GNGSNDLLELLARAFLGPGDEIIYSQYAFAVY 121 (365)
T ss_pred CHHHHHHHHHHHHH-CCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHCCCCCEEEECCCCHHHH
T ss_conf 99999999998886-166959668--9999999999784866-7998-77899999999998558998767668866899
Q ss_pred HHHHHHHCCCCCEEEEE-CCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-
Q ss_conf 88765323876306740-577765786767-----855657997420242022032035---025-6861488640110-
Q gi|254780153|r 105 WMSDIRQLSLQDVREFT-APYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA- 173 (391)
Q Consensus 105 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs- 173 (391)
....+..+..+..+. .++ ..+++++ +..+.+.++.=..-||...+..+. +.. ..+.++|+|-+=.
T Consensus 122 --~~~~~~~g~~~~~vp~~~~--~~dl~~l~~~i~~~~klv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vV~DEaY~e 197 (365)
T PRK03566 122 --PLATQAVGARAVEVPAKDY--GHDLEAMLAAITPKTRLVFIANPNNPTGTFLSAAELEAFLAKVPPDVLVVLDEAYTE 197 (365)
T ss_pred --HHHHHHCCCEEEEECCCCC--CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHH
T ss_conf --9999981974899617676--769588998638888689977999988773570658999975456744985245777
Q ss_pred HHHCC-----CC-CCCCE--EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCC
Q ss_conf 11025-----45-56857--999700120017665--1544567788876541144577831232001123210334786
Q gi|254780153|r 174 VFARH-----ID-FNKLD--VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE 243 (391)
Q Consensus 174 ~g~~p-----~d-~~~iD--v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (391)
|...+ ++ ..+.+ ++.-+.-|.++. || +|.++.+++..++....+.
T Consensus 198 f~~~~~~~~~~~~~~~~~n~iv~rSfSK~~gl-aGlRiGy~ia~~~li~~l~~~~~------------------------ 252 (365)
T PRK03566 198 YAAPEERPDSLAWLKKYPNLVVSRTFSKAYGL-AGLRVGYAVSNPEIADLLNRVRQ------------------------ 252 (365)
T ss_pred HCCCCCCCCHHHHHHHCCCEEEEEECCHHCCC-CCHHHEEEECCHHHHHHHHHHCC------------------------
T ss_conf 50477777788876413772598545452057-57301410169999999999618------------------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCH
Q ss_conf 446664488999999998620103189999999977999999987479716766882003653178-9824731011373
Q gi|254780153|r 244 TINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDI 322 (391)
Q Consensus 244 ~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~ 322 (391)
+++.++....+...+|+ .+.=++...+..++..+.+.+.+++.+ +..+. |.++-. ++++.+
T Consensus 253 -p~~vn~~aq~aa~aaL~---~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p------s~~nF~l~~~~~~------- 314 (365)
T PRK03566 253 -PFNVNSLALAAAVAALD---DDDFLAKSRELNRAGMQQLEAGFDALG-LEYIP------SKGNFVTVDVGRD------- 314 (365)
T ss_pred -CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC------CCCEEEEEECCCC-------
T ss_conf -88977999999999958---999999999999989999999999787-98878------9980899978999-------
Q ss_pred HHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4567888999998886282872665-5676750568615888999999999999999999
Q gi|254780153|r 323 NSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 323 ~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
...+...|.++|+++.-+. +. .+.-+||+.+ ++++.++|+++|+..+++
T Consensus 315 ------~~~l~~~L~~~gV~Vrp~~~fg-l~~~lRis~g---~~een~~l~~aL~~il~e 364 (365)
T PRK03566 315 ------AAAIYQALLRQGVIVRPVAGYG-MPNHLRVSIG---LPEENARFLAALKKVLAE 364 (365)
T ss_pred ------HHHHHHHHHHCCEEEEECCCCC-CCCEEEEEEC---CHHHHHHHHHHHHHHHCC
T ss_conf ------9999999997791898689899-9897999958---999999999999998766
No 64
>PRK05968 hypothetical protein; Provisional
Probab=99.37 E-value=3.6e-10 Score=84.01 Aligned_cols=284 Identities=14% Similarity=0.107 Sum_probs=171.3
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+=+... + +..+||-+|+.+++++++++|+.+++...-||. +++.......+.+++.+
T Consensus 61 ~NPT~~~lE~~l---a~LEgg~~---a-~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~v~~v 133 (389)
T PRK05968 61 DNPTVRAFEEML---AKLEGAED---A-RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAYRLFGTLLKRMGVEVDYV 133 (389)
T ss_pred CCHHHHHHHHHH---HHHHCCCE---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 886699999999---99829963---8-8854889999999999608999898588766758999998886078469996
Q ss_pred ECCCCCCCCHHHCCCC-CCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf 0577765786767855-657997420242022032---0--3502568614886401--101102545568579997001
Q gi|254780153|r 121 TAPYGSLPDFSKVDFD-RDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ 192 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~~-~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ 192 (391)
+.. +.+.++.. +..-+++.||.+--.+.+ . ..+++++++++|||-+ |-+...|++. ++|+++-|.-
T Consensus 134 d~~-----d~~~~~~~i~~Tklv~~EtpsNP~l~v~DI~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~T 207 (389)
T PRK05968 134 DGR-----DEEAVAKALPGAKLLYLESPTSWVFELQDIAALAALAKRHGVVTVIDNSWASPVFQRPITL-GVDLVIHSAS 207 (389)
T ss_pred CCC-----CHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHHH-CCCEEEEECC
T ss_conf 899-----9999996276872899978999887273899999999983995999778611642584240-7987997045
Q ss_pred HCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 200176651--544567788876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r 193 KVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS 270 (391)
Q Consensus 193 K~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~ 270 (391)
|-++|-+-+ |+|+.+++.+.+..... . ...|. +++-+..|.+...| ..+.
T Consensus 208 Kyi~GHsDvl~G~v~~~~~~~~~~~~~~--------------~-----~~lG~---~lsP~~a~l~lRGL------~TL~ 259 (389)
T PRK05968 208 KYLGGHSDTVAGVVAGSKEHIARINAEA--------------Y-----PYLGG---KLSPFEAWLLLRGL------RTLP 259 (389)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHH--------------H-----HHCCC---CCCHHHHHHHHCCC------CCHH
T ss_conf 3446898844269945699999999999--------------9-----86277---78858889998479------8699
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---------CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE
Q ss_conf 999999977999999987479716766882003---------65317898247310113734567888999998886282
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENLAVDETTR---------SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEI 341 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r---------S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~ 341 (391)
-|.+||.+++..+-+|+++++..... ..|.-. ....++|.+.+.. ..+.+...|.--..
T Consensus 260 lRm~rh~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~~~l~g~gg~~sf~l~~~~-----------~~~~f~~~L~lf~~ 327 (389)
T PRK05968 260 LRMKAHEASALLIARRLKAHPVVETV-CHPALANHPPAGLSGTSGLFSFIFREGV-----------DVRRFADALKLFRL 327 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCHHHHCCCCCEEEEEEECCHH-----------HHHHHHHHCCCCEE
T ss_conf 99999999999999999619998663-3888522313421786437999957779-----------99999984880756
Q ss_pred EECCCCCCCC--------------------C--C-EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8726655676--------------------7--5-056861588899999999999999999999
Q gi|254780153|r 342 AYDIGSYRDA--------------------P--L-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 342 ~~~~~~~r~~--------------------~--~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
+..+|+.++. | . -+|++++ .||++.|++-|+.||++.+
T Consensus 328 a~SlGg~eSLi~~~~~~~~~~~~~~~~~~~Gi~~~liRlSVG----lEd~eDLi~Dl~qAL~~a~ 388 (389)
T PRK05968 328 GVSWGGHESLVVPAEVVLQQKAQPNSAARFGISPRSVRLHVG----LEGTEALWADLEQALAAAS 388 (389)
T ss_pred ECCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHHC
T ss_conf 316686430218706641677998899865969496999931----0999999999999999843
No 65
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.36 E-value=3.4e-09 Score=77.87 Aligned_cols=313 Identities=15% Similarity=0.093 Sum_probs=182.6
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf 88868887768968999986321036532898899999999999999968899857999748734899987532057897
Q gi|254780153|r 13 RPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391)
Q Consensus 13 ~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391)
+.+++=-|-...|. +++++....-. .||=|+- -..+.++.|.+.++++.+ .|++ ..|+...+..++..++++|+
T Consensus 37 kL~sNENP~gpsp~-v~~Ai~~~~~~-~~rYPd~--~~~~Lr~~lA~~~gv~~e-~I~~-gnGSdeli~~~~~a~~~~g~ 110 (370)
T PRK08153 37 RIGANESGFGPSPS-VIAAMREAAAE-VWKYGDP--ENHDLRHALAAHHGVAPE-NIMV-GEGIDGLLGLIVRLYVEPGD 110 (370)
T ss_pred EECCCCCCCCCCHH-HHHHHHHHHHH-CCCCCCC--CHHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCC
T ss_conf 86899999898999-99999976864-5679997--789999999998687866-7998-08889999999999855999
Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----C-C-CCCCEEEEEEECCCCEEECCEEE--EC-C-CC
Q ss_conf 0799707368888876532387630674057776578676----7-8-55657997420242022032035--02-5-68
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----V-D-FDRDVVFVWNGTTSGVCVPDVGF--IP-E-SR 162 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~-~-~~~~v~~~h~ETstGv~~~~~~~--~~-~-~~ 162 (391)
.++.....|..-.. .+...+...+.+....... +++. . + ..+.+.+|.=..-||...+..++ +. . ..
T Consensus 111 ~vv~~~p~y~~y~~-~~~~~g~~~~~vp~~~~~~--d~~~~l~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~l~~~~~~ 187 (370)
T PRK08153 111 AVVTSLGAYPTFNY-HVAGFGGRLVTVPYRDDHE--DLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPE 187 (370)
T ss_pred CCCCCCCCCCHHHH-HHHHHCCEEEEEECCCCCC--CHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 23437887516999-9998196699994456544--86999986037897389976895985776786889999984777
Q ss_pred CCEEEEEECCH-HHHC----CCCCCCCEEE-EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 61488640110-1102----5455685799-97001200176651--544567788876541144577831232001123
Q gi|254780153|r 163 EGLVICDATSA-VFAR----HIDFNKLDVV-TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 163 ~~llivD~vSs-~g~~----p~d~~~iDv~-~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
++++|+|-.=. |... ++....=.++ .-+--|.+| -+|+ |..+.+++.++...+...
T Consensus 188 ~~lvVvDEAY~ef~~~~~~~~l~~~~~NliVlRTfSK~yg-LAGlRlGY~ia~~~li~~l~k~r~--------------- 251 (370)
T PRK08153 188 TTLLVLDEAYCETAPASAAPPIDPDDPNVIRMRTFSKAYG-LAGARVGYAIGTPGTIKAFDKVRN--------------- 251 (370)
T ss_pred CCEEEEEHHHHHHCCCCCHHHHHHCCCCEEEEEECCHHCC-CCCCCCCCCCCCHHHHHHHHHHCC---------------
T ss_conf 7389621535643564217788743998899982622037-888743201389999999998648---------------
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-EC
Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898-24
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IV 313 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~ 313 (391)
++.-+.....+...+|+ .+.=++...++..+-.+.+.+.++..+ +..+ -|.+|..+. +.
T Consensus 252 ----------p~~vn~~aq~aa~aaL~---d~~~~~~~~~~i~~~R~~l~~~l~~~g-~~~~------pS~aNFil~~~~ 311 (370)
T PRK08153 252 ----------HFGMNRIAQAAALAALK---DQAYLAEVVAKIAAARDRIAAIARANG-LTPL------PSATNFVAIDCG 311 (370)
T ss_pred ----------CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEEECC
T ss_conf ----------98877999999999977---999999999999999999999998685-8479------997877999848
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 7310113734567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
. +......+...|.++|+++.-.+.......+||+++ ++++.++|+++|+.+++++|
T Consensus 312 ~----------~~~~a~~l~~~L~~~GIlVR~~~~~~l~~~lRIsiG---t~een~~~l~aL~eiLk~~~ 368 (370)
T PRK08153 312 R----------DGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSVG---PEEELDLFAEALPEALKAAR 368 (370)
T ss_pred C----------CHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHHHHHHH
T ss_conf 9----------746999999999978919944998889998999739---99999999999999999863
No 66
>PRK07049 methionine gamma-lyase; Validated
Probab=99.35 E-value=1.2e-09 Score=80.68 Aligned_cols=276 Identities=17% Similarity=0.189 Sum_probs=159.3
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HH-HHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 9999999968899857999748734899987532057897079970736888--88-76532387630674057776578
Q gi|254780153|r 53 AIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WM-SDIRQLSLQDVREFTAPYGSLPD 129 (391)
Q Consensus 53 ~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~-~~~~~~~~~~~~~~~~~~g~~~~ 129 (391)
..+.|..|=+.. -.+..+||.+|..+++++++++|+.+++...-||.- .+ ..+.+.+ ..++..... .+
T Consensus 88 lE~~iA~LEg~~----~a~~~sSGmaAi~~~ll~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~G-I~~~~~~d~----~d 158 (427)
T PRK07049 88 VEDRLAVYEGAE----AAALFSSGMSAIATTLLAFVRPGDVIVHSQPLYGGTETLLAKTFRNFG-VGAVGFADG----VS 158 (427)
T ss_pred HHHHHHHHCCCC----CEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECC----CC
T ss_conf 999999980998----489934699999999998518999999899982789999999999759-889997089----99
Q ss_pred HHHCC-------CCCCEEEEEEECCCCEEE---CCEEE--EC------CCCCCEEEEEEC--CHHHHCCCCCCCCEEEEE
Q ss_conf 67678-------556579974202420220---32035--02------568614886401--101102545568579997
Q gi|254780153|r 130 FSKVD-------FDRDVVFVWNGTTSGVCV---PDVGF--IP------ESREGLVICDAT--SAVFARHIDFNKLDVVTF 189 (391)
Q Consensus 130 ~~~~~-------~~~~v~~~h~ETstGv~~---~~~~~--~~------~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a 189 (391)
.+.++ ......+++.||.+--.. ++..+ ++ +.+++++|||-+ +-+...|++. ++|+++-
T Consensus 159 ~~~~~~~i~~~~~~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~g~~~~~~i~~vvDNT~atP~~~~Pl~~-GaDivvh 237 (427)
T PRK07049 159 EAAIEAAAEAAAAKGRVSLIYIETPANPTNALVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEH-GADLSVY 237 (427)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHCCCCCEEEEECCCCCCCCCCCHHH-CCCEEEE
T ss_conf 999999998621478706999978999877265889999999984420147876999788623213681542-8988999
Q ss_pred CCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 001200176651--544567788876541144577831232001123210334786446664488999999998620103
Q gi|254780153|r 190 SAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG 267 (391)
Q Consensus 190 ~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g 267 (391)
|.-|-|+|-+-+ |.|+.+++.++++.... . ..|. +++-+..|.+...| .
T Consensus 238 S~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~---------------~-----~~G~---~~sP~~a~L~lrGL------~ 288 (427)
T PRK07049 238 SLTKYVGGHSDLVAGAVLGRKALVRQVRALR---------------G-----AIGT---QLDPHSCWMLGRSL------E 288 (427)
T ss_pred ECCCEECCCCCCCCCEEECCHHHHHHHHHHH---------------H-----HHCC---CCCCHHHHHHHCCC------C
T ss_conf 6361424887751351646799999999987---------------5-----3147---78906778886368------8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCC--C----CCCCC---------CCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 18999999997799999998747971676--6----88200---------365317898247310113734567888999
Q gi|254780153|r 268 GLSACVERCNANAAVLFQFIQENDWIENL--A----VDETT---------RSNTSICMKIVDSDIASLDINSQKSFCKSM 332 (391)
Q Consensus 268 Gl~~~~~r~~~~a~~l~~~i~~~~~~~~~--~----~~~~~---------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 332 (391)
.|.-|.+||.+++..+-+|+++++..... + .+..+ -...++.|.+.... +. ...+
T Consensus 289 TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~Ypgl~~~~~~~~~l~~~~~~G~Gg~~sf~l~g~~------~~----~~~f 358 (427)
T PRK07049 289 TLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVFKRQCTGAGSTFSFDIKGGQ------AA----AFRF 358 (427)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCH------HH----HHHH
T ss_conf 6999999999999999999984898327977897888768999999727898438999972889------99----9999
Q ss_pred HHHHHHCCEEECCCCCCCCC----------------------C-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99888628287266556767----------------------5-0568615888999999999999999999
Q gi|254780153|r 333 LSFLEKEEIAYDIGSYRDAP----------------------L-GLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 333 ~~~l~~~g~~~~~~~~r~~~----------------------~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
...|.--..++.+|+.++.- . -+|++++ .||++.|++-|+.||+.
T Consensus 359 ~~~l~lf~~a~SlGg~eSLi~hPa~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~eDLi~DL~qAL~a 426 (427)
T PRK07049 359 LNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESLIRLSIG----IEHPDDLIADLAQALDA 426 (427)
T ss_pred HHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHC
T ss_conf 982880636426687650313753115646999999965979296999923----39999999999999832
No 67
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.34 E-value=2.5e-09 Score=78.65 Aligned_cols=285 Identities=13% Similarity=0.098 Sum_probs=167.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++. |..+-+.. -.++.+||-+|..+++++++++|+.+++...-||.- .+.......+.++...
T Consensus 60 ~NPT~~~lE~~---la~LEg~~----~a~~fsSGmaAis~~ll~ll~~Gd~il~~~~~YggT~~l~~~~l~~~Gi~v~~~ 132 (395)
T PRK08114 60 GTLTHFSLQEA---MCELEGGA----GCALYPCGAAAVANSILAFVEQGDHVLMTGTAYEPSQDFCSKILSKLGVTTTWF 132 (395)
T ss_pred CCHHHHHHHHH---HHHHHCCC----CEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 88769999999---99970997----379826889999999999708999899768885689999999998759569985
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCC--CEEEEEEC--CHHHHCCCCCCCCEEEEE
Q ss_conf 057776578676785--565799742024202203203-----5025686--14886401--101102545568579997
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESRE--GLVICDAT--SAVFARHIDFNKLDVVTF 189 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~--~llivD~v--Ss~g~~p~d~~~iDv~~a 189 (391)
+. .+.++++. .+..-+++.||.+--...+.. .+++.++ ++++||-+ +-+...|+++ ++|+++-
T Consensus 133 d~-----~d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~~~~~~~vvDNTfatP~~~~Pl~~-GaDivih 206 (395)
T PRK08114 133 DP-----LIGADIAKLIQPNTKVVFLESPGSITMEVHDIPAIVAAVRSVAPDAVIMIDNTWAAGVLFKALDF-GIDISIQ 206 (395)
T ss_pred CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC-CCEEEEE
T ss_conf 79-----99999997468775499994489866522679999999986056868997188788765544466-6749999
Q ss_pred CCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 00120017665--1544567788876541144577831232001123210334786446664488999999998620103
Q gi|254780153|r 190 SAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG 267 (391)
Q Consensus 190 ~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g 267 (391)
|.-|-|+|-.- .|.++.+++.+++..... . ..|. +++-+..|.+...| .
T Consensus 207 S~TKyl~GHsDv~~G~v~~~~~~~~~l~~~~---------------~-----~~G~---~~~p~~a~Ll~RGL------~ 257 (395)
T PRK08114 207 AGTKYLIGHSDAMIGTAVANARCWEQLRENS---------------Y-----LMGQ---MVDADTAYMTSRGL------R 257 (395)
T ss_pred ECCCEECCCCCCEEEEEECCHHHHHHHHHHH---------------H-----HHCC---CCCHHHHHHHHCCC------C
T ss_conf 6665005778852478852788999999999---------------9-----7378---79979999997567------6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 18999999997799999998747971676688200--------------3653178982473101137345678889999
Q gi|254780153|r 268 GLSACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSML 333 (391)
Q Consensus 268 Gl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 333 (391)
.+.-|.+||.+++..+-+|+++++..... ..|.. .....+.|.+.+... .+. ...+.
T Consensus 258 TL~lRm~~~~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~h~la~~~~~g~gg~~sf~l~~~~~----~~~----~~~fl 328 (395)
T PRK08114 258 TLGVRLKQHQESSLKVAEWLAEHPEVARV-NHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLT----DEE----LANYL 328 (395)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCC----HHH----HHHHH
T ss_conf 38899999999999999999639997589-8999989843899997578987799999857779----999----99999
Q ss_pred HHHHHCCEEECCCCCCCC--------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 988862828726655676--------------------75-05686158889999999999999999999
Q gi|254780153|r 334 SFLEKEEIAYDIGSYRDA--------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 334 ~~l~~~g~~~~~~~~r~~--------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
..|.--..+..+|+.++. .. -+|+++| .||++.|++-||.||++.
T Consensus 329 ~~l~lf~~a~SlGg~eSLi~~~~~~~~~~~~~~~~~~i~~~liRlSvG----lEd~eDLi~DL~qAL~~i 394 (395)
T PRK08114 329 DNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIG----LEDVDDLIADLAAGFARI 394 (395)
T ss_pred HCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHH
T ss_conf 808926582051763402217985444436803443999797999942----399899999999999833
No 68
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.33 E-value=2e-08 Score=72.98 Aligned_cols=329 Identities=14% Similarity=0.044 Sum_probs=177.0
Q ss_pred CCCCCCCCCC-CCCCCHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHH
Q ss_conf 8998886888-7768968999986321036-5328---988999999999999999688998-57999748734899987
Q gi|254780153|r 10 KPKRPFFSSG-PCAKRPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMA 83 (391)
Q Consensus 10 ~p~~~~F~pG-P~~~~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~ 83 (391)
.|.-++|+-| |.--+|..+++++.+.+-+ -.|+ +.=..++-+.+-+.+++-.+.+-+ -..++++.|++.++..+
T Consensus 26 ~~~iI~l~~G~pd~~~p~~v~~a~~~al~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~vt~Ga~~al~~~ 105 (389)
T PRK05957 26 NPGTISLGQGVVSYPPPPEAIEALNNFLANPENHLYQSVQGIPPLLEAITQKLQADNGIEINNENAIVVTAGSNMAFMNA 105 (389)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
T ss_conf 99938899989999988999999999982867886899757499999999999999689989898899887889999999
Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--
Q ss_conf 5320578970799707368888876532387630674057776578676785-----565799742024202203203--
Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-- 156 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-- 156 (391)
+.-++.+||.+++..=.|..- ...+...+ ..+..+..+.+...+++.++. .+.+.++.-..-||...+..+
T Consensus 106 ~~al~~pGD~Vlv~~P~Y~~~-~~~~~~~g-~~~v~vp~d~~~~~~~~~l~~~i~~~~k~iil~~P~NPTG~v~s~~~l~ 183 (389)
T PRK05957 106 ILAITDPGDEIILNTPYYFNH-EMAITMAG-CQPVLVPTDENYQLRPEAIEAAITPKTRAIVTISPNNPTGVVYPEALLR 183 (389)
T ss_pred HHHHCCCCCEEEECCCCCCCH-HHHHHHCC-CCEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHH
T ss_conf 999759999899778877668-99999749-9358865799889799999984510262786189989989887677899
Q ss_pred ---EECCCCCCEEEEEECCHHH---HCC-C------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCC
Q ss_conf ---5025686148864011011---025-4------556857999700120017665--154456778887654114457
Q gi|254780153|r 157 ---FIPESREGLVICDATSAVF---ARH-I------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSW 221 (391)
Q Consensus 157 ---~~~~~~~~llivD~vSs~g---~~p-~------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~ 221 (391)
.+|..++.++|.|-+=+-. +.+ + +..+.-+.+.|.-|.++ .|| +|.++..++.+++....+
T Consensus 184 ~l~~la~~~~~~ii~DE~Y~~l~~~~~~~~s~~~~~~~~~~vI~i~S~SK~~~-~~G~RvG~~v~~~~l~~~~~~~~--- 259 (389)
T PRK05957 184 AVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYG-FASWRIGYMVIPIHLLEAIKKIQ--- 259 (389)
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEECHHHHHHHHHHH---
T ss_conf 99987606781899898432134588666776544563454301344431244-65643488983899999999998---
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
..+...+++..-++...+|+.- +.-++...++.+++.+.+.+.+...+....+.. ++
T Consensus 260 --------------------~~~~~~~~~~~Q~aa~~al~~~--~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~-p~ 316 (389)
T PRK05957 260 --------------------DTILICPPVVSQYAALGALQVG--KSYCQQHLPEIAQVRQILLKSLAQLQDWCFLHP-AN 316 (389)
T ss_pred --------------------HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC-CC
T ss_conf --------------------5456785399999999999779--999999999999999999999985689726607-98
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 03653178982473101137345678889999988-86282872665-567675-0568615888999999999999999
Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
+..-+-..++. . .+ ...+...+ .+.|+++--|. +...+. -+|++. ++.+++.++.-++-|..+
T Consensus 317 --G~f~~~~~~~~-~---~~-------~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~Rlsf-~~~~~e~l~eg~~RL~~a 382 (389)
T PRK05957 317 --GAFYCFLKVNT-D---LN-------DFELVKQLIRDYRVAVIPGSTFGMKNGCYLRIAY-GALQKATAKEGIERLVQG 382 (389)
T ss_pred --EEEEEEEECCC-C---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEE-CCCCHHHHHHHHHHHHHH
T ss_conf --57999897898-9---69-------9999999999799999787310889999899985-429999999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780153|r 379 FYF 381 (391)
Q Consensus 379 ~~~ 381 (391)
+++
T Consensus 383 lk~ 385 (389)
T PRK05957 383 LKT 385 (389)
T ss_pred HHH
T ss_conf 999
No 69
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.33 E-value=5e-09 Score=76.75 Aligned_cols=295 Identities=18% Similarity=0.124 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391)
|. +++++...... .||=|+ .-..+.++.|.+.++++.+ .|+ +..|++..+..++..++.+|+.+++..-.|+..
T Consensus 45 ~~-v~~al~~~~~~-~~~YPd--~~~~~Lr~~iA~~~gv~~e-~I~-vgnGs~E~i~~~~~a~~~~gd~vl~~~Ptf~~Y 118 (366)
T PRK01533 45 PR-VLDELQKSWLD-HALYPD--GGATTLRQTIANKLHVKME-QVL-CGSGLDEVIQIISRAVLKAGDNIVTAGATFPQY 118 (366)
T ss_pred HH-HHHHHHHHHHH-CCCCCC--CCHHHHHHHHHHHHCCCHH-HEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHH
T ss_conf 99-99999987874-557969--7789999999998682821-299-817899999999999947998236589886457
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC-CCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEEC-CHH
Q ss_conf 88765323876306740577765786767----855-657997420242022032035---025-68614886401-101
Q gi|254780153|r 105 WMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD-RDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDAT-SAV 174 (391)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~v-Ss~ 174 (391)
...++..+..+..+....+ ..+++++ +.. +.+.++.=..-||...+..++ +.. ..+.++|+|=. -.|
T Consensus 119 --~~~a~~~g~~~~~v~l~~~-~~d~~~i~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~ll~~~~~~~~vviDEAY~ef 195 (366)
T PRK01533 119 --RHHAIIEGCEVKEVALNNG-VYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEY 195 (366)
T ss_pred --HHHHHHCCCEEEEEECCCC-CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHH
T ss_conf --9999980864899836778-6699999975065987899779999976746706589998627877378612878976
Q ss_pred HHC-C----CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCC
Q ss_conf 102-5----45-56857--9997001200176651--5445677888765411445778312320011232103347864
Q gi|254780153|r 175 FAR-H----ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGET 244 (391)
Q Consensus 175 g~~-p----~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (391)
... + ++ ..+.+ ++.-+--|.+| -||+ |.++.+++.+++......
T Consensus 196 ~~~~~~~~~~~l~~~~~NliVlrTfSK~~g-laGlRiGy~ia~~~ii~~l~~~~~------------------------- 249 (366)
T PRK01533 196 VTAKDFPETLPLLEKHKNILVLRTFSKAYG-LASFRVGYAVGHEELIEKLNVVRL------------------------- 249 (366)
T ss_pred HCCCCCCHHHHHHHCCCCEEEEECCCHHCC-CCCHHHHHHHCCHHHHHHHHHHCC-------------------------
T ss_conf 425787105778761898489972743236-830345366289999999998558-------------------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf 46664488999999998620103189999999977999999987479716766882003653178982473101137345
Q gi|254780153|r 245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINS 324 (391)
Q Consensus 245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~ 324 (391)
|++-+.....+...+|. ++.-++...+...+..+.+...++.. ++..+ -|.+|..+. +-+.
T Consensus 250 p~~vn~la~~aa~aaL~---d~~~~~~~~~~~~e~~~~~~~~l~~~-g~~v~------pS~aNFilv-~~~~-------- 310 (366)
T PRK01533 250 PFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY------QSQTNFIFL-PVEN-------- 310 (366)
T ss_pred CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC------CCCCCEEEE-ECCC--------
T ss_conf 98843999999999967---99999999999999999999999878-68589------997877998-6699--------
Q ss_pred HHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6788899999888628287266556767505686158889999999999999999999998
Q gi|254780153|r 325 QKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 325 ~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
...+...|.++|+++ |..+..+||+.+ ++++.++|+++|+..|.+.|-.
T Consensus 311 ----~~~l~~~L~~~GIlV-----R~~~~~iRIsvg---t~eeN~~ll~aLke~~e~~~~~ 359 (366)
T PRK01533 311 ----GGEIYEACAHAGFII-----RPFPNGVRITVG---TREQNEGVISVLQQHFENKKRK 359 (366)
T ss_pred ----HHHHHHHHHHCCEEE-----EECCCCEEEECC---CHHHHHHHHHHHHHHHHHCCCC
T ss_conf ----999999999689899-----899598788279---9999999999999999855632
No 70
>PRK06507 consensus
Probab=99.33 E-value=1.6e-08 Score=73.54 Aligned_cols=331 Identities=10% Similarity=0.001 Sum_probs=176.5
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCCCCCC-CH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 8868887768-9689999863210365328-98--899999999999999968899857999748734899987532057
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLGRSHR-CV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391)
.+|+-|=-.. +|..+++++.+.+..-.++ ++ =..++-+.+-+.+++-++.+-+.+=++++.|++.++..++..++.
T Consensus 34 i~L~iG~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~I~vt~G~~~al~~~~~~l~~ 113 (400)
T PRK06507 34 VSLSSGEPDFPTPAHAIEAAHAAALAGDTKYPPMDGTPALKAAIQRKFKRENNLDYDPSEIVVSNGGKQVIFNAMMATCN 113 (400)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCC
T ss_conf 77789388998889999999999745899879987849999999999999848999824389817829999999999669
Q ss_pred CCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----
Q ss_conf 8970799707368888876532387630674--057776578676785-----5657997420242022032035-----
Q gi|254780153|r 90 YRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF----- 157 (391)
Q Consensus 90 ~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~----- 157 (391)
+||.+++..=.|..- ...+...+. .+..+ ....|..+++++++. .+.+.++.=..-||...+..+.
T Consensus 114 pGD~Vli~~P~y~~y-~~~~~~~g~-~~v~v~l~~~~g~~~d~~~le~~~~~~tk~iil~~P~NPTG~v~s~~~l~~i~~ 191 (400)
T PRK06507 114 PGDEVVIPAPSWVSY-ADIVKLAGG-VPVAVPCREETGFKLRPEDLEAAITPRTKWLFLNFPNNPTGAACTRAEMAAIAE 191 (400)
T ss_pred CCCEEEECCCCCCHH-HHHHHHCCC-EEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 999899905877405-799998199-159975670117641699999746756649997499293128864779999998
Q ss_pred ECCCC-CCEEEEEECCHH---HHCC-C-------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCC
Q ss_conf 02568-614886401101---1025-4-------556857999700120017665--15445677888765411445778
Q gi|254780153|r 158 IPESR-EGLVICDATSAV---FARH-I-------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPL 223 (391)
Q Consensus 158 ~~~~~-~~llivD~vSs~---g~~p-~-------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~ 223 (391)
++.++ +.++|.|-+=+- .+.+ . ++.+--+.+.|.-|.++ .|| +|.++..++.+++....+
T Consensus 192 ~a~~~~~v~visDEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~~~-~~G~RiG~~~~~~~~i~~~~~~~----- 265 (400)
T PRK06507 192 VMLRHPHVWIMTDDIYEHLVYDGFEFCTIAEVEPRLYDRVLTMNGVSKAYA-MTGWRLGFCGGPKELIKAMSNVN----- 265 (400)
T ss_pred HHHHCCCCEECCCCCHHHHEECCCCCCCHHHHCCCCCCCEEEEECCCCCCC-CCCCCEEEEECCHHHHHHHHHHH-----
T ss_conf 665316821405664244120897788788858564553589833544446-76510487748799999999998-----
Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 31232001123210334786446664488999999998620103189999999977999999987479716766882003
Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR 303 (391)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r 303 (391)
.+....++...-++...+|+.-. .-++.+.+.++++.+.+.+.+...+++....++-.+
T Consensus 266 ------------------~~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rrd~l~~~L~~~~g~~~~~P~G~f- 324 (400)
T PRK06507 266 ------------------GQATGGIATLAQAAAAAALDGPQ--DLLKERAAIYRERRDFVVEKLAEIPGLTCHKPEGAF- 324 (400)
T ss_pred ------------------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE-
T ss_conf ------------------65247654399999999984977--777899999999999999999847899567898147-
Q ss_pred CCCEEEEEECCCCCCC----CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 6531789824731011----373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 304 SNTSICMKIVDSDIAS----LDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 304 S~~~v~~~~~d~~~~~----~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
-+-..+++-.... .....+..+ ...++.+.|+++--|..=..+.-+||+.. .+.++++.-++-|+.++
T Consensus 325 ---y~~~~~~~~~~~~~~~~~~~~~d~~f---~~~Ll~e~gV~v~PG~~FG~~~~vRis~a--~~~~~l~eal~Rl~~f~ 396 (400)
T PRK06507 325 ---YIYPNIAGLIGKTSKGGRRLETDEDF---VMALLEEQHVATVQGAAYGMSPYFRLSYA--TDMESLGEGCARIAQFC 396 (400)
T ss_pred ---EEEEECCCCCCCCCCCCCCCCCHHHH---HHHHHHHCCEEEECCCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHH
T ss_conf ---99775401023345345667888999---99999858999977874489983999964--99999999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 380 YF 381 (391)
Q Consensus 380 ~~ 381 (391)
++
T Consensus 397 ~~ 398 (400)
T PRK06507 397 ED 398 (400)
T ss_pred HH
T ss_conf 96
No 71
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.33 E-value=3.1e-09 Score=78.11 Aligned_cols=285 Identities=14% Similarity=0.141 Sum_probs=166.5
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..|-+... + +..+||-+|+.+++++++++|+.++....-||.- +.+......+.+++.+
T Consensus 62 ~NPT~~~lE~~l---a~LEgg~~---a-~~~sSGmaAi~~~ll~~l~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~v 134 (392)
T PRK05967 62 GTPTTDALCKAI---DALEGSAG---T-ILVPSGLAAVTVPLLGFLSAGDHALIVDSVYYPTRHFADTMLKRLGVEVEYY 134 (392)
T ss_pred CCHHHHHHHHHH---HHHCCCCC---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEE
T ss_conf 887799999999---99809987---7-9945779999999999738998899448984458999999876368699998
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--5657997420242022032---0--3502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.+.++. .....+++.||.+--.+.+ . ..+++++++++|||-+ +-+...|++. +.|+++-|.
T Consensus 135 d~~-----~~~~~~~~i~~~Tklv~~Etp~NP~l~v~Di~~ia~~A~~~g~~~vVDNTfatP~~~~Pl~~-GADiVvhS~ 208 (392)
T PRK05967 135 DPE-----IGAGIEKLMRPNTKVVFTESPGSNTFEIQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDF-GVDISIHAA 208 (392)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCEECCCCC-CCCEEEEEC
T ss_conf 899-----99999974487865999855899864553549999999876987996177545342145655-686899966
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-|+|-..+ |.|+.+++.+++..... ...|. +++-+.-|.+...| ..+
T Consensus 209 TKyl~GHsDvl~G~v~~~~~~~~~l~~~~--------------------~~~G~---~l~P~~a~l~lrGl------~TL 259 (392)
T PRK05967 209 TKYPSGHSDILLGTVSANEKCWPQLLEAH--------------------GTLGL---CAGPDDTYQILRGL------RTM 259 (392)
T ss_pred CCCCCCCCCCCCCEECCCHHHHHHHHHHH--------------------HHHCC---CCCHHHHHHHHHCC------CHH
T ss_conf 64666887520432337778889999998--------------------75046---67978889987177------609
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
.-|.+||.+++..+-+|+++++..... ...|.+ -....++|.+..... . ....+...|
T Consensus 260 ~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~g~~-----~----~~~~f~~~l 330 (392)
T PRK05967 260 GIRLEHHRKSALEIARWLEGRPMVARVLHPALPSHPGHEIWKRDFSGASGIFSFVLAAGGH-----A----QAHAFLDAL 330 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH-----H----HHHHHHHHC
T ss_conf 9999999998999999997199976897999889944999998566897389999926839-----9----999999828
Q ss_pred HHCCEEECCCCCCCC----------------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 862828726655676----------------7-505686158889999999999999999999
Q gi|254780153|r 337 EKEEIAYDIGSYRDA----------------P-LGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 337 ~~~g~~~~~~~~r~~----------------~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.--..+..+|+.++. . .-+|+|++= ||++.|++=|+.||..+
T Consensus 331 ~l~~~a~SlGg~eSL~~h~~~~~~~~~~~~~~~~liRlSVGl----Ed~~DLi~DL~qAL~aa 389 (392)
T PRK05967 331 EIFGLGYSWGGYESLALHVKLGDRTVAKNPYAGPVIRLQIGL----EDVPDLKADLERGFAAA 389 (392)
T ss_pred CCCEEECCCCCCHHEEECCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHH
T ss_conf 716573155770020268889989997479998989999440----99999999999999973
No 72
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.32 E-value=4e-09 Score=77.40 Aligned_cols=286 Identities=17% Similarity=0.174 Sum_probs=167.2
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..|-+.. .+ +..+||-+|+.+++++++++||.+++....||. +.........+..++.+
T Consensus 62 ~nPT~~~lE~~l---a~LEgg~---~a-~~~sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgT~~l~~~~l~~~Gi~~~~v 134 (399)
T PRK06234 62 GNPTSTEVENKL---ALLEGGE---AA-VVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFV 134 (399)
T ss_pred CCHHHHHHHHHH---HHHHCCC---EE-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 886799999999---9983997---59-9845889999999999718999899758872048999998865168578862
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CEE--EECCCC-CCEEEEEECC--HHHHCCCCCCCCEEEEEC
Q ss_conf 057776578676785--565799742024202203---203--502568-6148864011--011025455685799970
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DVG--FIPESR-EGLVICDATS--AVFARHIDFNKLDVVTFS 190 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~~--~~~~~~-~~llivD~vS--s~g~~p~d~~~iDv~~a~ 190 (391)
+. .+++.++. .+...+++.||.+--... +.. .+++++ ++++|||-+= -+...|++. ++|+++-|
T Consensus 135 d~-----~d~~~~~~ai~~~Tklv~~Etp~NP~l~v~Di~~ia~iA~~~~g~~~vvDNT~atP~~~~Pl~~-GaDivihS 208 (399)
T PRK06234 135 DT-----SNLEEVRNALKANTKVVYLETPANPNLKVTDIKAISNIAHENKECLVFVDNTFCTPYIQRPLQL-GADVVVHS 208 (399)
T ss_pred CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC-CCCEEEEE
T ss_conf 68-----8969999647888449999789998866148589999876557976872589776144674004-89789982
Q ss_pred CHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 01200176651--5445677888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r 191 AQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG 268 (391)
Q Consensus 191 sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG 268 (391)
.-|-|+|-.-+ |+|+.+++.+.+.... .+.. ..|. +++-+..|.+...| ..
T Consensus 209 ~TKyi~GHsD~l~G~v~~~~~~~~~~r~~----------~~~~--------~~G~---~l~p~~a~l~lrGL------~T 261 (399)
T PRK06234 209 ATKYLNGHGDVIAGFVVGKEEFINQVKLF----------GVKD--------MTGS---VIGPFEAFLIIRGM------KT 261 (399)
T ss_pred CCCEECCCCCCEEEEEECCHHHHHHHHHH----------HHHH--------HCCC---CCCHHHHHHHHCCC------CC
T ss_conf 56310588771546996559999999999----------9887--------0188---68878889986246------74
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC----C-CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 899999999779999999874797167----6-688200--------365317898247310113734567888999998
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQENDWIEN----L-AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~~~~~~----~-~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
+.-|.+||.+++..+-+|+++++.... - ...|.+ .....+.|.+.... +. ...+...
T Consensus 262 L~lR~~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~lak~~~~g~gg~~sf~l~~~~------~~----~~~f~~~ 331 (399)
T PRK06234 262 LQIRMEKHCKNAMEVAEFLEKHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV------EE----GKVLMNN 331 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------HH----HHHHHHH
T ss_conf 9999999999999999999848984779898988994689999767899963688856979------99----9999981
Q ss_pred HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676----------------------75-05686158889999999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
|.-...+..+|+.++. .. -+|++++= ||++.|++-|+.||.+.
T Consensus 332 l~lf~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~gi~~~liRlSVGl----Ed~eDLi~DL~qAL~~i 397 (399)
T PRK06234 332 VKLATLAVSLGDAETLIQHPASMTHSPYTAEERAEAGISDGLVRLSVGL----EDVEDIIADLKQALDLI 397 (399)
T ss_pred CCCCEECCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHHHH
T ss_conf 8846430467766330058521257679999999669891969999400----99999999999999986
No 73
>PRK08362 consensus
Probab=99.32 E-value=1.5e-08 Score=73.72 Aligned_cols=317 Identities=15% Similarity=0.132 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHCC-CCCCCCH--HHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 6899998632103-6532898--8999999999999999688998--579997487348999875320578970799707
Q gi|254780153|r 25 PGWSLGILEGALL-GRSHRCV--LGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391)
Q Consensus 25 p~~v~~~~~~~~l-~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391)
|..+.+++...+= +..|-++ -..++-+.+.+.+++-++.+-+ .+|++ +.|++.++..++..++.+||.+++-+=
T Consensus 41 p~~i~~a~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~p~~~i~i-t~G~~~al~~~~~~l~~pGD~Vlv~~P 119 (389)
T PRK08362 41 PQHIKEYAKEALDKGLTHYGPNIGLPELREAIAEKLKKQNGIEADPKKEIMV-LVGANQAFLMGLATFLKDGEEVLIPSP 119 (389)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE-CCCHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 8999999999985587688998570999999999998840999997643998-188699999999997589998998158
Q ss_pred CHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEE
Q ss_conf 368888876532387630674-057776578676785-----5657997420242022032035-----02568614886
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVIC 168 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~lliv 168 (391)
.|..- ...+...+...+.+. ..+.+..+++++++. .+.+.++.-..-||...+..+. +|.+++.++|.
T Consensus 120 ~Y~~y-~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~i~~~~k~iil~~P~NPtG~v~s~~~l~~i~~~a~~~~~~ii~ 198 (389)
T PRK08362 120 MFVSY-APAVILAGGKPVEVPTYEENEFRLNVDDLKKYVTEKTRALIINSPNNPTGSVLTKKDLEEIADFAVEHDLMVIS 198 (389)
T ss_pred CCCCH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 65426-89999749989998545777887699999974544682999848989847463199999999998754957981
Q ss_pred EECCHHH---H-CCCC---CCC---CEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 4011011---0-2545---568---579997001200176651--54456778887654114457783123200112321
Q gi|254780153|r 169 DATSAVF---A-RHID---FNK---LDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 169 D~vSs~g---~-~p~d---~~~---iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
|-+=+-. + .+.. .++ --+.+.|.-|.++ -||+ |.++..+..+++....+ .
T Consensus 199 DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-l~G~RiG~~i~~~~~i~~~~~~~---------------~-- 260 (389)
T PRK08362 199 DEVYEHFIYDGVKHYSIASLDGMFERTITVNGFSKTFA-MTGWRLGFVAAPSWVIEKMVKFQ---------------M-- 260 (389)
T ss_pred CCCHHHHCCCCCCCCCHHHCCCCCCCEEEECCCHHHCC-CCCCCEEEEECCHHHHHHHHHHH---------------H--
T ss_conf 46456410189777686660454452023033101016-87653699980899999999999---------------8--
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
.+..+|+++.-++...+|..-.....++.+.+.++++.+.+++.+...+ +.... |. +..-+-+.+++..
T Consensus 261 ------~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~--P~--g~~~~w~~~~~~~ 329 (389)
T PRK08362 261 ------YNATCPVTFIQYAAAKALRDERSWKAVEEMRKEYDRRRNLVWKRLNEMG-LPTVK--PK--GAFYIFPRIRDTG 329 (389)
T ss_pred ------HCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEC--CC--EEEEEEEECCCCC
T ss_conf ------6047886599999999985970479999987889999999999888759-95557--88--2589947888889
Q ss_pred CCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0113734567888999998-886282872665-5676750-568615888999999999999999999999
Q gi|254780153|r 317 IASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
.. ...+... +.+.|+++--|. +...+.+ +|++.. .+++.++.-++.|+.++++.|.
T Consensus 330 ~~----------~~~~~~~ll~e~gV~~~PG~~Fg~~~~~~~Rl~~a--~~~e~l~ea~~RL~~~l~e~k~ 388 (389)
T PRK08362 330 LT----------SKEFSELMLKEAKVAVVPGSAFGKAGEGYIRISYA--TAYEKLEEAMDRMEKVLKEKKL 388 (389)
T ss_pred CC----------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHCCC
T ss_conf 89----------99999999982999998673338899897999971--9999999999999999985569
No 74
>PRK07678 aminotransferase; Validated
Probab=99.32 E-value=9.9e-09 Score=74.89 Aligned_cols=332 Identities=12% Similarity=0.028 Sum_probs=172.7
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCCC-EE
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205-------7897-07
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYRG-VD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~~-~~ 94 (391)
+|+ |.+++..++-...|-+..+. ...-+.-+.|.+++ |.++.| |+..||+.|+|+++.=.. .++. ..
T Consensus 65 ~p~-i~~Ai~~q~~~l~~~~~~~~~~~~~~lae~L~~~~--p~~~~v-ff~~SGsEAvE~AiKlAr~y~~~~g~~~r~~i 140 (451)
T PRK07678 65 RKE-LAEAAYEQLQTLSYFPLSQSHEPAIKLAEKLNEWL--GGEYVI-FFSNSGSEANETAFKIARQYHAQKGEPHRYKF 140 (451)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCEE-EECCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 699-99999999975888677534689999999999757--976189-95397389999999999999986099974243
Q ss_pred EEEECCHHHHHHHHHHHCCC-----------CCEEEEE------CCCCCCCCH------HHC------CCCCCEEEEEEE
Q ss_conf 99707368888876532387-----------6306740------577765786------767------855657997420
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSL-----------QDVREFT------APYGSLPDF------SKV------DFDRDVVFVWNG 145 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~------~~~g~~~~~------~~~------~~~~~v~~~h~E 145 (391)
+...++|=++-..-...-+. ..+.... .+.+...+. +.+ +....++.+-.|
T Consensus 141 i~~~~~yHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAaii~E 220 (451)
T PRK07678 141 ISRYRGYHGNTMGALAATGQAQRKYKYEPLAPGFLHVAPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAFIME 220 (451)
T ss_pred CCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 46267403897234511574310578888888815738984235776665226679999999999875078867999997
Q ss_pred CC---CCEEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHH
Q ss_conf 24---2022032------0350256861488640110-110--254--5568579997001200176-651544567788
Q gi|254780153|r 146 TT---SGVCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPAS 210 (391)
Q Consensus 146 Ts---tGv~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~a 210 (391)
.. -|+..|. .+.+|+++++++|+|=|.+ ||- .-+ +..++.-.+....|+|++= .=++.++.+++.
T Consensus 221 Pi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~gG~~Plsav~~~~ei 300 (451)
T PRK07678 221 PIITGGGILMPPQDYMKAVHEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEI 300 (451)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCEEEEECHHH
T ss_conf 53777882318879867787741245955773224027874566500110595277200133445777761677762989
Q ss_pred HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 87654114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r 211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN 290 (391)
Q Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~ 290 (391)
.+.... ...... ...++|+.-=|+ ...+..++|+.++++ ++ .++.+++.+.+.+.+...
T Consensus 301 ~~~~~~---~~~~~~-------------~~h~~T~~gnpl-a~aaa~a~L~~l~~~-~l---~~~~~~~g~~l~~~L~~~ 359 (451)
T PRK07678 301 YEAFKG---KGEYEF-------------FRHINTFGGNPA-ACALALKNLEIMENE-NL---IERSAQLGSLLLEQLKEE 359 (451)
T ss_pred HHHHCC---CCCCCC-------------CCCCCCCCCCHH-HHHHHHHHHHHHHCC-CH---HHHHHHHHHHHHHHHHHH
T ss_conf 976357---887666-------------434788987989-999999999998415-09---999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--CCCEEEEECCCCCCHHHH
Q ss_conf 971676688200365317898247310113734567888999998886282872665567--675056861588899999
Q gi|254780153|r 291 DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--APLGLRVWVGVTVEKEDL 368 (391)
Q Consensus 291 ~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--~~~~~RIg~~g~i~~~dv 368 (391)
-.-.+.+.+-..+..+...=.+.|+....- .+......+...+.++|.+++..|... .+..+|+.--=.++.+++
T Consensus 360 ~~~~p~i~dVRG~GLm~gielv~d~~~~~p---~~~~~~~~i~~~~~~~Glli~~~g~~~~~~~n~lr~~PPL~it~~ei 436 (451)
T PRK07678 360 LGEHPLVGDIRGKGLLVGIELVNDKETKEP---ADNDKVASVVNACKEKGLIIGKNGMTVAGYNNVLTLAPPLCISSEEL 436 (451)
T ss_pred HHCCCCEEEEEECCEEEEEEEECCCCCCCC---CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCHHHH
T ss_conf 745998888761656899998536655787---99999999999999779888147873257899899978824889999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780153|r 369 LLLCDWLRWVFYFQK 383 (391)
Q Consensus 369 ~~L~~aLe~~~~~~k 383 (391)
+.+++.|+.++.++|
T Consensus 437 d~~~~~l~~al~~v~ 451 (451)
T PRK07678 437 AFVVGTLKTAMERIK 451 (451)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999639
No 75
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.32 E-value=1.1e-08 Score=74.53 Aligned_cols=315 Identities=15% Similarity=0.158 Sum_probs=188.6
Q ss_pred CCHHHHHHHHHHHCCCC---------CCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf 89689999863210365---------328988999-99999999999968899857999748734899987532057897
Q gi|254780153|r 23 KRPGWSLGILEGALLGR---------SHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391)
Q Consensus 23 ~~p~~v~~~~~~~~l~~---------sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391)
+.|. |+++++..+-++ .+-+.++.+ +=.-+.++.+++|+.. | +=+-+-||+.++-++...|++|||
T Consensus 37 ~S~~-v~~a~gS~l~nkYaEG~pg~RyY~G~~~iD~iE~la~~ra~~lF~a~--~-anVqp~SGs~AN~av~~all~PGD 112 (415)
T PRK00011 37 VSPA-VMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKKLFGAE--Y-ANVQPHSGSQANAAVYFALLKPGD 112 (415)
T ss_pred CCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC--C-CCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 7999-99986472227577889984245665269999999999999983898--6-056778639999999999627898
Q ss_pred EEEEEE---CC-HHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECC
Q ss_conf 079970---73-688888765323876306740-57776578676785-----565799742024202203--2035025
Q gi|254780153|r 93 VDVLAW---ES-FGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPE 160 (391)
Q Consensus 93 ~~~~~~---g~-~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~ 160 (391)
.++... |+ -+.....-+.... .+...+. .+.....|.+++.. .+.+.++-- ++.--..| ....+++
T Consensus 113 ~im~l~l~~GGHltHg~~~~~~~~~-~~~~~y~~d~~~~~IDyd~~~~~a~~~kPklIi~G~-S~y~r~~d~~~~reIad 190 (415)
T PRK00011 113 TILGMDLAHGGHLTHGSPVNFSGKL-YNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGA-SAYSRPIDFKKFREIAD 190 (415)
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCE-EEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECC-CCCCCCCCHHHHHHHHH
T ss_conf 5876686667876578675544652-478986786434816799999999860998899646-13533128899999999
Q ss_pred CCCCEEEEEECCHHHH-----CCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 6861488640110110-----25455685799970012001766515445677888765411445778312320011232
Q gi|254780153|r 161 SREGLVICDATSAVFA-----RHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 161 ~~~~llivD~vSs~g~-----~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
+.++++++|+.--.|= .|=+....|++.++.+|-|-||-| +++..+++..+++...
T Consensus 191 ~vgA~l~~D~aHi~GLIA~g~~~~Pl~~ADvvt~tTHKTlrGPrG-GiIl~~~e~~~kId~a------------------ 251 (415)
T PRK00011 191 EVGAYLMVDMAHIAGLVAAGVHPNPVPHADVVTTTTHKTLRGPRG-GLILTNEELAKKINSA------------------ 251 (415)
T ss_pred HHCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCHHHHHHHCC------------------
T ss_conf 709889945355666664333799667756885453346789886-0797340666665412------------------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391)
.+ ..+-..|-.+.|.++..++.+..+. +.....++..++++.+-+.+...+ +.... -..-+.. +.+.+.+.
T Consensus 252 ---VF-Pg~qggph~h~iAa~Aval~Ea~~~-~f~~Ya~qVv~NAk~La~~L~~~G-~~vv~--ggTdnHl-vlvdl~~~ 322 (415)
T PRK00011 252 ---VF-PGIQGGPLMHVIAAKAVAFKEALEP-EFKEYAQQVVKNAKALAEALQERG-FKVVS--GGTDNHL-VLVDLRKK 322 (415)
T ss_pred ---CC-CCCCCCCHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEEE--CCCCCCE-EEEECCCC
T ss_conf ---07-5314680477899999999998474-189999999999999999997689-77971--7987744-77645645
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--C--CC--CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHH
Q ss_conf 10113734567888999998886282872665--5--67--67505686158----88999999999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--Y--RD--APLGLRVWVGV----TVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~--r~--~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~ 381 (391)
.+. -+.....|.+.|+.+.-+. + ++ .+.|+|||+-- ...++|+..+.+.|..++..
T Consensus 323 g~~----------G~~a~~~Le~~gI~vNkn~iP~d~~~~~~~SGiRiGt~a~TtrG~~e~em~~ia~~I~~~l~~ 388 (415)
T PRK00011 323 GLT----------GKDAEAALEEANITVNKNAIPFDPRSPFVTSGIRIGTPAITTRGFKEAEMEEIAELIADVLDN 388 (415)
T ss_pred CCC----------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf 688----------999999999859087558798999998888601436788974899889999999999999837
No 76
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.32 E-value=2e-09 Score=79.25 Aligned_cols=285 Identities=16% Similarity=0.174 Sum_probs=163.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+=+... .++.+||-+|..++++ ++.+|+.+++....||. ++..+.....+..+...
T Consensus 52 ~nPT~~~Le~~l---a~LE~~~~----a~~~~SGmaAi~~~l~-~l~~Gd~vv~~~~~Yg~T~~l~~~~l~~~Gi~~~f~ 123 (390)
T PRK08064 52 GNPTREALEDII---AELEGGTK----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFV 123 (390)
T ss_pred CCHHHHHHHHHH---HHHHCCCC----EEEHHHHHHHHHHHHH-HHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf 886699999999---99829976----5502339999999999-867999999848885679999986765098799997
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. ++++++. .+..-+++.||.+--...+.. .++++++++++||-+ |-+...|+++ ++|+++-|.
T Consensus 124 d~~-----d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~atP~~~~Pl~~-GaDivihS~ 197 (390)
T PRK08064 124 DMT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAHGCLTFVDNTFLTPLLQKPLDL-GADVVLHSA 197 (390)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf 885-----73779974788845999978999887412719999999883996997377335043685774-886999963
Q ss_pred HHCCCCCCCC--EEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 1200176651--5445677-888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG 268 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG 268 (391)
-|-++|-..+ |.++.+. +..++..... ...|. +++-+..|.+...| ..
T Consensus 198 TKyi~Ghsd~l~G~vv~~~~~~~~~~~~~~--------------------~~~G~---~l~p~~a~l~lrgl------~T 248 (390)
T PRK08064 198 TKFLAGHSDVLAGLAVVKDEELAQKLYFLQ--------------------NSFGA---VLGVQDCWLVLRGL------KT 248 (390)
T ss_pred CCCCCCCCCCCCEEEEECCHHHHHHHHHHH--------------------HHCCC---CCCCHHHHHHHHCC------CC
T ss_conf 631158876404168617889999999999--------------------85077---67905678987256------86
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCC--------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8999999997799999998747971676-----68820--------0365317898247310113734567888999998
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQENDWIENL-----AVDET--------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~--------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
+.-|.+||.+++..+-+|+++++..... ...+. .....+++|.+.+.+ ..+.+...
T Consensus 249 L~lRm~~~~~nA~~iA~~L~~hp~V~~V~yPgL~s~p~h~l~~~~~~g~Gg~~sf~l~~~~-----------~~~~f~~~ 317 (390)
T PRK08064 249 LHVRLEHSAATANKIAQYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEE-----------AVRQFVSK 317 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCHH-----------HHHHHHHH
T ss_conf 8899999999999999999719990679898999991499999628997149999989999-----------99999983
Q ss_pred HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676----------------------75-05686158889999999999999999999998
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
|.--..++.+|+..+. .. -+|+++| .||++.|++-|+.||.+.|..
T Consensus 318 l~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~~~~~Gi~~~liRlSvG----lE~~~DLi~DL~qAL~~i~~~ 386 (390)
T PRK08064 318 VKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVG----LENVDDLIADFEQALSYVEEP 386 (390)
T ss_pred CCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHHHHH
T ss_conf 882622116377444104762246634899999975989394999960----089999999999999973314
No 77
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.32 E-value=1.2e-08 Score=74.27 Aligned_cols=324 Identities=11% Similarity=0.012 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHCCCCCCC-CH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf 689999863210365328-98--899999999999999968899857999748734899987532057897079970736
Q gi|254780153|r 25 PGWSLGILEGALLGRSHR-CV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF 101 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~ 101 (391)
|..+++++...+-.-.|+ ++ -..++-+.+.+.+++-++.+-+-+=++++.|++.++..++..++++||.+++.+=.|
T Consensus 48 p~~i~~a~~~al~~~~~~Y~~~~G~~eLReAia~~~~~~~g~~v~p~~I~vt~G~~~al~~~~~al~~pGD~Vlv~~P~Y 127 (402)
T PRK06107 48 PDHIKAAAVAAIERGETKYTLVNGTPALRKAIIAKMERRNGLHYADNEICVGGGAKQAIFLALMATLEEGDEVIIPAPYW 127 (402)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 89999999999855999996998889999999999999868999820499868889999999999579999899816866
Q ss_pred HHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCC-CCEEEEE
Q ss_conf 888887653238763067-4057776578676785-----5657997420242022032035-----02568-6148864
Q gi|254780153|r 102 GLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESR-EGLVICD 169 (391)
Q Consensus 102 ~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~-~~llivD 169 (391)
..-. ..+...++..+.+ .....+..++++.++. .+.+.++.=..-||...+..+. ++..+ +.++|.|
T Consensus 128 ~~y~-~~~~~~g~~~~~~p~~~~~~~~~d~d~le~~~~~~tk~iil~~P~NPTG~v~s~~~l~~i~~i~~~~~~i~iisD 206 (402)
T PRK06107 128 VSYP-DMVLANDGTPVIVPCPEEDGFKLTAEALEAAITPRTRWLILNAPSNPTGAAYSRDELRALADVLLRHPHVLVLTD 206 (402)
T ss_pred CCHH-HHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 5379-999983995673687823487589999997456476699988998989966534899999887752489328622
Q ss_pred ECCH---HHHCCCC--------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 0110---1102545--------56857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r 170 ATSA---VFARHID--------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 170 ~vSs---~g~~p~d--------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
-+=+ +...+.. +.+--+++.|.-|.++ -|| +|.++..++.+++....+
T Consensus 207 EiY~~l~~~~~~~~~~~~~~p~~~~~~i~i~s~SK~~~-~~G~RiG~~v~~~~li~~l~~~~------------------ 267 (402)
T PRK06107 207 DIYDHIRFDDEPVTHLLTAAPELRDRVLLTNGVSKTYA-MTGWRIGYAAGPADLIAAINKLQ------------------ 267 (402)
T ss_pred HHHHHHEECCCCCCCHHHHCHHHHCCCEEECCCCCCCC-CCCCEEEEEEECHHHHHHHHHHH------------------
T ss_conf 20255221898888689858244225447424534567-76622689985899999999996------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE--CC
Q ss_conf 0334786446664488999999998620103189999999977999999987479716766882003653178982--47
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI--VD 314 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~--~d 314 (391)
.++...++...-++...+|+.- +.=++.+.+.++++.+.+.+.+.+.+++....++-.+.-.....-.+ ..
T Consensus 268 -----~~~~~~~~~~~Q~aa~~aL~~~--~~~~~~~~~~y~~rrd~~~~~l~~~~g~~~~~P~g~~y~~~d~~~~~~~~~ 340 (402)
T PRK06107 268 -----SQSSSCPSSISQAAAAAALNGD--QSFVAESVKVYKQRRDYALERLNAIPGLSCLVPDGAFYLYVNCAGLIGKTT 340 (402)
T ss_pred -----HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCC
T ss_conf -----2434689899999999999688--478999999999999999998875799676279812798130510034458
Q ss_pred CCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 31011373456788899999-8886282872665567675056861588899999999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
|.... .+. ..++.. ++.+.|+++--|-.=....-||++.. .+.+.++.-++-|+-+.+..|
T Consensus 341 p~~~~--~~~----~~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~fa--~~~e~L~ea~~Rl~~al~~lr 402 (402)
T PRK06107 341 PEGKV--LET----DTDVVLYLLDSVGVAVVQGTAYGLSPYFRMSIA--TSLETLEAGCDRIERAVAALR 402 (402)
T ss_pred CCCCC--CCC----HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 66566--568----899999999858999977853389982999971--999999999999999999649
No 78
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.31 E-value=5.4e-09 Score=76.54 Aligned_cols=284 Identities=14% Similarity=0.147 Sum_probs=167.8
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++. |..+-+... . +..+||-+|+.+++++++++|+.+++...-||. +.........+..+..+
T Consensus 56 ~nPT~~~le~~---la~LEg~~~---a-~~~sSGmaAi~~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~~~~v 128 (386)
T PRK07811 56 GNPTRTALEEQ---LAALEGGKY---G-RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV 128 (386)
T ss_pred CCHHHHHHHHH---HHHHHCCCC---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEE
T ss_conf 88679999999---999849987---8-9833399999999999838999899378765219999999987358049977
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--565799742024202203---203--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +++.++. .+...+++.||.+--... +.. .+++++++++|||-+ +-+...|++ .++|+++-|.
T Consensus 129 d~~-----d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~Pl~-~GaDiVvhS~ 202 (386)
T PRK07811 129 DLS-----DLDAVRAAITPRTKLIWVETPTNPLLSITDIAAIAELAHDAGAKVVVDNTFASPYLQQPLA-LGADVVLHST 202 (386)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEECHHH-HCCCEEEEEC
T ss_conf 887-----8788986558883499997799987640585899999985578188316733520425234-0798799734
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-++|-..+ |.++.+++.+... . .+. . ...|. +++-+..|.+...|+ .+
T Consensus 203 TKyl~GHsDvl~G~vv~~~~~~~~~--~----------~~~--~-----~~~G~---~~sP~~a~l~lrGL~------TL 254 (386)
T PRK07811 203 TKYIGGHSDVVGGALVTNDEELDEE--F----------AFL--Q-----NGAGA---VPGPFDAYLTMRGLK------TL 254 (386)
T ss_pred CCEECCCCCCEEEEEEECCHHHHHH--H----------HHH--H-----HHCCC---CCCHHHHHHHHHHHH------HH
T ss_conf 4400578772424786082899999--9----------999--9-----74278---788578889986573------69
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
.-|.+||.+++..+-+|+++++..... ...|.+ ....+++|.+++.. +. .+.+...|
T Consensus 255 ~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~Gg~~sf~l~g~~------~~----~~~f~~~L 324 (386)
T PRK07811 255 AVRMDRHSENAEAVAEFLDGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLRGGE------EA----ARDFCART 324 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------HH----HHHHHHHC
T ss_conf 999999999999999999729983779899999993789999867999863489962869------99----99999708
Q ss_pred HHCCEEECCCCCCCC-------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 862828726655676-------------------75-0568615888999999999999999999
Q gi|254780153|r 337 EKEEIAYDIGSYRDA-------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 337 ~~~g~~~~~~~~r~~-------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.--..+..+|+.++. +. -+|++++ .||++.|++-|+.||.+
T Consensus 325 ~lf~~a~SlGg~eSLi~~pa~~th~~~~~~~~~i~~~liRlSVG----lEd~~DLi~Dl~qAL~~ 385 (386)
T PRK07811 325 KVFTLAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVG----IEDVADLLADLEQALGK 385 (386)
T ss_pred CCCEEEECCCCCCHHEECCCCCCCCCCCHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHC
T ss_conf 91626578775523004875466311597763999496999760----08999999999999824
No 79
>PRK06917 hypothetical protein; Provisional
Probab=99.30 E-value=2.5e-08 Score=72.37 Aligned_cols=335 Identities=13% Similarity=0.070 Sum_probs=174.6
Q ss_pred CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCC-CE
Q ss_conf 9689999863210--365328988999999999999999688998579997487348999875320------5-789-70
Q gi|254780153|r 24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYR-GV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~-~~ 93 (391)
+|+ |.+++.+++ +...|++.-..+...+.-+.|.+++. .+..-+++..|||.++|+++.=. - .++ ..
T Consensus 49 ~p~-i~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p--~~~~~~~f~~SGsEAvE~AiKlA~~y~~~r~~t~r~~ 125 (447)
T PRK06917 49 VKE-IADVIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANETAMKIAIQHWQERGIQGKHK 125 (447)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 799-9999999985388736664245899999999998578--8878799628789999999999999999838999848
Q ss_pred EEEEECCHHHHHHHHHHHCC---------C--CCEEEEECCC------CCCCC------HHHCC------CCCCEEEEEE
Q ss_conf 79970736888887653238---------7--6306740577------76578------67678------5565799742
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLS---------L--QDVREFTAPY------GSLPD------FSKVD------FDRDVVFVWN 144 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~---------~--~~~~~~~~~~------g~~~~------~~~~~------~~~~v~~~h~ 144 (391)
++...++|=++...-..--+ . .+......|+ ....+ .++++ ....++.+-.
T Consensus 126 Iis~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~ 205 (447)
T PRK06917 126 ILSRWMSYHGITMGALSMSGHPLRRQRFVSILEDYPTISAPYCYRCPVQKVYPTCQLACATELERSIERIGAEHIAAFIA 205 (447)
T ss_pred EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 99950551466660366238821147878878897744898655777776540358999999999999738877469997
Q ss_pred ECCCC----EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf 02420----22032------0350256861488640110-110--254--5568579997001200176-6515445677
Q gi|254780153|r 145 GTTSG----VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP 208 (391)
Q Consensus 145 ETstG----v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~ 208 (391)
|...| +..|. ...+|+++++++|+|=|.+ ||- .-+ +.+++.=.+...-|+|++= .=++.++.++
T Consensus 206 EPi~g~~Gg~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDii~~gK~l~gG~~Pl~av~~~~ 285 (447)
T PRK06917 206 EPIIGAAGGAVVPPKGYYKVIKDICSHYDILFIADEVMTGLGRTGAWFAMEHWGVEPDIMTLGKGLGAGYTPMAATVVSD 285 (447)
T ss_pred CCCEECCCCCEECCHHHHHHHHHHHHHCCCEEEEEECEECCCCCCCCCHHHHCCCCCCEEEECHHHCCCCCCEEEEEECH
T ss_conf 13030579716468789999999965269528974110078756874315335989778977401118987738998818
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
+..+..... .. ....++|+.--|+ ...+..++|+.+++++ ..+|.+++.+.+.+.+.
T Consensus 286 ~i~~~~~~g--~~----------------~~~~g~Tf~gnpl-a~aaa~a~L~~l~~~~----l~~~~~~~G~~l~~~L~ 342 (447)
T PRK06917 286 RVMEPILRG--SR----------------SVMSGHTLSANPL-SAATALAVIEYMEKHN----LPEKTAEKGEYLIKGLQ 342 (447)
T ss_pred HHHHHHCCC--CC----------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHH
T ss_conf 988654058--87----------------6201778989999-9999999999998645----99999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC--C-CCCCCCEEEEECCCCCCH
Q ss_conf 4797167668820036531789824731011373456788899999888628287266--5-567675056861588899
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIG--S-YRDAPLGLRVWVGVTVEK 365 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~-~r~~~~~~RIg~~g~i~~ 365 (391)
.+..-.+++.+-.-+..+...-.+.|..... ...........+.....++|.++... + ....+..+|+.--=.++.
T Consensus 343 ~l~~~~~~i~dVRG~GLm~giel~~d~~~~~-~~~~~~~~a~~i~~~~~~~Gll~~~~~~~~~g~~~~~lrl~PPL~it~ 421 (447)
T PRK06917 343 EVQQQSTIIGDVRGKGLLIGVEFVADQKTKK-PFPQPFSKASELISVAAKNGLLLYPAVSGQAGKEGSALLIAPPMTTTY 421 (447)
T ss_pred HHHHCCCCEEEEEECCEEEEEEEECCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCCH
T ss_conf 9986399778765156169999842665567-787248999999999997898898744567789999899979922789
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998
Q gi|254780153|r 366 EDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 366 ~dv~~L~~aLe~~~~~~k~~ 385 (391)
++|+.+++.|+.++.++-.+
T Consensus 422 ~eid~~i~~l~~al~ev~~~ 441 (447)
T PRK06917 422 SELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999983
No 80
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.30 E-value=3.8e-09 Score=77.53 Aligned_cols=286 Identities=17% Similarity=0.157 Sum_probs=167.8
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++. |..+-+.. .++ +.+||-+|+.+++++++++|+.+++....||. +++....+..+.++...
T Consensus 51 ~nPT~~~le~~---la~LEg~~---~a~-~~~SGmaAis~~~l~ll~~Gd~iv~~~~~Yg~T~~l~~~~l~~~gi~~~~~ 123 (388)
T PRK08861 51 GNPNRGLLEQA---LSELESGK---GAV-VTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVLFV 123 (388)
T ss_pred CCHHHHHHHHH---HHHHHCCC---CEE-EECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 88659999999---99984998---379-963789999999998368999899868985506899998986288699998
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC--EE---EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--5657997420242022032--03---502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD--VG---FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~--~~---~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.+.++. .+...+++.||.+--...+ .+ .++++++++++||-+ +-+...|++ .++|+++-|.
T Consensus 124 d~~-----d~~~~~~~i~~~Tkli~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atP~~~~Pl~-~GaDivvhS~ 197 (388)
T PRK08861 124 DQS-----DAAALDAALAKKPKLILLETPSNPLVRVVDIAEVCQKAKQVGALVAVDNTFLTPVLQKPLE-LGADFVIHST 197 (388)
T ss_pred CCC-----CCHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCHHHHCCCHH-CCCCEEEEEC
T ss_conf 999-----8278997348785399984489998366565999999987399599978851253037210-3887899962
Q ss_pred HHCCCCCCCC--EEEEECHHHH-HHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 1200176651--5445677888-765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASV-ERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG 268 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG 268 (391)
-|-++|-..+ |.|+.+.+.+ ++... + . ...|. +++-+..|.+...| ..
T Consensus 198 TKyi~GHsDvlgG~vv~~~~~~~~~l~~------------~---~-----~~~G~---~~sP~~a~l~~RGL------~T 248 (388)
T PRK08861 198 TKYINGHSDVIGGVLITKTKEHAEELAW------------W---G-----NCIGA---TGTPFDSYMTLRGI------RT 248 (388)
T ss_pred CCCCCCCCCCCCEEEEECCHHHHHHHHH------------H---H-----HHCCC---CCCHHHHHHHHCCC------CC
T ss_conf 4012588875021895074888899999------------9---9-----85177---78867778885478------97
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCC--------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8999999997799999998747971676-----68820--------0365317898247310113734567888999998
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQENDWIENL-----AVDET--------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~--------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
+.-|.+|+.+++..+-+|+++++..... ...|. ......+.|.+.+.. + ....+...
T Consensus 249 L~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~lak~~~~g~ggm~sf~l~~~~------~----~~~~f~~~ 318 (388)
T PRK08861 249 LGARMRVHEESAQEILKYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSF------E----QLKVFVKA 318 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------H----HHHHHHHH
T ss_conf 8899999998699999999849992789898999992699998645698626999977989------9----99999983
Q ss_pred HHHCCEEECCCCCCCCC-----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88628287266556767-----------------------50568615888999999999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDAP-----------------------LGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~~-----------------------~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
|.--..++.+|++++.- .-+|+++| .||++.|++=|+.|+++.+.
T Consensus 319 l~lf~~a~SlGg~eSLi~~p~s~sh~~~~~~~~~~~gi~~~liRlsVG----lEd~eDLi~Dl~qAL~~a~~ 386 (388)
T PRK08861 319 LKLFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG----LEDAQDLIADLKQAFAKAAE 386 (388)
T ss_pred CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHHHH
T ss_conf 880533116687750213775455411899999866989496999942----19999999999999999875
No 81
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.30 E-value=7.8e-09 Score=75.55 Aligned_cols=308 Identities=17% Similarity=0.129 Sum_probs=176.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC-EEEEEECCH
Q ss_conf 96899998632103653289889-9999999999999968899857999748734899987532057897-079970736
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG-VDVLAWESF 101 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~-~~~~~~g~~ 101 (391)
+|+ |.+++..++-...|-+..| .+...+.-+.|.+++..++..+|+| ..||+.++|+++.=--..+. .++...++|
T Consensus 61 ~p~-i~~ai~~q~~~l~~~~~~~~~~~~~~lae~L~~~~~~~~~~kvff-~~SGsEA~E~AlKlAr~tgr~~Iis~~~sY 138 (398)
T PRK03244 61 HPA-VVEAVTRQLATLGHVSNLFATEPQIALAERLVALLGAPEGARVFF-CNSGAEANEAAFKLARLTGRTKIVAAEGGF 138 (398)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 899-999999999754777565358699999999998608996567997-186778999999999982998799983877
Q ss_pred HHHHHHHHHHCCCC---------CEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECCE------EEECCCCC
Q ss_conf 88888765323876---------3067405777657867678556579974202420---220320------35025686
Q gi|254780153|r 102 GLGWMSDIRQLSLQ---------DVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPDV------GFIPESRE 163 (391)
Q Consensus 102 ~~r~~~~~~~~~~~---------~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~~------~~~~~~~~ 163 (391)
=++......--+.. ...+...|++....++.. ....++.+-.|...| +..|.. ..+|+.++
T Consensus 139 HG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~-~~~~iAAii~EPiqg~gG~~~~~~~fl~~l~~lc~~~g 217 (398)
T PRK03244 139 HGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAA-VDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHG 217 (398)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH-HCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 68876542336885312346788787277157866899997-38985899985876889985688889999999985734
Q ss_pred CEEEEEECCHHHHCCCCC-----CCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 148864011011025455-----685--7999700120017665154456778887654114457783123200112321
Q gi|254780153|r 164 GLVICDATSAVFARHIDF-----NKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 164 ~llivD~vSs~g~~p~d~-----~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
.++|+|=|.+=.++-=.+ .++ |++..| |+|++===++.++.+++..+.. .
T Consensus 218 illI~DEV~tGfGRtG~~fa~e~~~v~PDIv~~g--K~lggG~P~sa~~~~~~~~~~~---~------------------ 274 (398)
T PRK03244 218 ALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLA--KGLGGGLPIGACLAFGPAADLL---T------------------ 274 (398)
T ss_pred CCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEC--CCCCCCCCCEEEEECHHHHHHC---C------------------
T ss_conf 5366662124877667861565337999889973--2024887616889718888641---7------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789-82473
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDS 315 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~ 315 (391)
....++|+.--|+ ...+..++|+.+++++ +.++.+++.+.+.+.++... .+++. +.|......- .+..
T Consensus 275 -~~~h~~T~~gnpl-~~aaa~a~L~~i~~~~----l~~~v~~~g~~l~~~L~~l~--~~~i~--~VRG~Gl~~giel~~- 343 (398)
T PRK03244 275 -PGLHGSTFGGNPV-ACAAALAVLRVIADEG----LLENAERLGKQLRAGIEALG--HPLVD--HVRGRGLLLGIVLTA- 343 (398)
T ss_pred -CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHCC--CCCEE--EEEEEEEEEEEEECC-
T ss_conf -8876747898989-9999999999997557----99999999999999998548--98614--100126899999667-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 10113734567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
+ ..+.+...+.+.|.++...+ ++.+|+.--=.++.++++.+++.||.++.++-
T Consensus 344 -------~----~~~~~~~~~~~~Gll~~~~g----~n~ir~~PPl~it~~eid~~~~~l~~~L~~~a 396 (398)
T PRK03244 344 -------P----VAKAVEAAAREAGFLVNAPA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred -------C----HHHHHHHHHHHCCCEECCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf -------3----19999999996891993189----99799949957899999999999999999985
No 82
>PRK07212 consensus
Probab=99.30 E-value=2.1e-08 Score=72.79 Aligned_cols=306 Identities=13% Similarity=0.084 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 689999863210----365328988999999999999999688998-579997487348999875320578970799707
Q gi|254780153|r 25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391)
Q Consensus 25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391)
|..+++++.+.+ .++++ +.-..++-+.+.+.+++-++.+=+ .+|++ +.|++.++..++..++++||.+++..=
T Consensus 46 p~~i~ea~~~~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~v~p~~I~v-t~G~~~al~~~~~~l~~pGD~Vlv~~P 123 (378)
T PRK07212 46 PKHICDAAIDAMDRGKTHYAP-SNGIPELREAIAEKLRTENHIDVTPDDVIV-TPGAKQAIYEAMMAVLDDGDEVILLDP 123 (378)
T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEEE-ECCHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 899999999998579998899-999999999999999998489987331999-478999999999984799898998179
Q ss_pred CHHHHHHHHHHHCCCCCEEEEE--CCCCCCCC-HHH-C-CCCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEE
Q ss_conf 3688888765323876306740--57776578-676-7-855657997420242022032035-----025686148864
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQDVREFT--APYGSLPD-FSK-V-DFDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICD 169 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~-~~~-~-~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD 169 (391)
.|..-. ..+...+ ..+..+. ...+..++ +++ + +..+.+.++.=..-||...+..+. +|..++..+|.|
T Consensus 124 ~Y~~y~-~~~~~~g-~~~v~vpl~~~~~~~~~~l~~~i~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~la~~~~~~ii~D 201 (378)
T PRK07212 124 AWVSYE-ACIKFAG-GKPVWVPLNPEDFQLPDDLAEAITDKTKLIVVNSPSNPTGAVFGKESLQGVADLAVDHDLYVLSD 201 (378)
T ss_pred CCCCHH-HHHHHCC-CEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCC
T ss_conf 634256-8999719-96999835556785289999856657829998899799898847176889999777424501330
Q ss_pred ECCH---HHHCCCCC---CC---CEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf 0110---11025455---68---57999700120017665--15445677888765411445778312320011232103
Q gi|254780153|r 170 ATSA---VFARHIDF---NK---LDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391)
Q Consensus 170 ~vSs---~g~~p~d~---~~---iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
-+=+ ++..+... .+ --+.+.|.-|.++ .|| +|.++.+++.+++.....
T Consensus 202 EiY~~l~~~~~~~~~~~l~~~~~~~i~~~S~SK~~~-l~GlRvG~~~~~~~~i~~~~~~~-------------------- 260 (378)
T PRK07212 202 EIYEKIIYGKEHISLGSLDGMADRTITINGFSKAYA-MTGWRLGYLTAPEEIIKQMGKVQ-------------------- 260 (378)
T ss_pred CCHHHHHCCCCCCCHHHCCCCCCCCCEECCCCCCCC-CCCEEEEEEECCHHHHHHHHHHH--------------------
T ss_conf 011544048877774334454555403335421367-77604898973999999999998--------------------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 34786446664488999999998620103189999999977999999987479716766882003653178982473101
Q gi|254780153|r 239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391)
Q Consensus 239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391)
..+...++.+..++...+++.-. .-++.+.++.+++.+.+.+.+...+ +.... ++ +..-+-+.++.
T Consensus 261 ---~~~~~~~~~~~q~aa~~al~~~~--~~l~~~~~~~~~~r~~l~~~L~~~g-~~~~~--p~--g~~~~~~~~~~---- 326 (378)
T PRK07212 261 ---SHSVSSATTFVQYGGVAALKGPQ--DCVEEMRDEFEARRDILIDGLADMG-LECAP--PD--GAFYAFPNVDG---- 326 (378)
T ss_pred ---HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CC--EEEEEEEECCC----
T ss_conf ---64557887699999999996877--8899999999999999999999769-86626--88--16999997899----
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 1373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
+ ...+ ....+.+.|+++.-|..=..+.-+|++... ++++++.-++-|+.++
T Consensus 327 --~---~~~~---~~~ll~~~gV~v~pG~~Fg~~g~iRl~~a~--~~e~l~eal~RL~~~L 377 (378)
T PRK07212 327 --D---DTAV---AERLLKDAHVAVTPGSAFGAPGWIRISYAT--SMERLKEALERLEKVL 377 (378)
T ss_pred --C---HHHH---HHHHHHHCCEEEEECCCCCCCCEEEEEEEC--CHHHHHHHHHHHHHHH
T ss_conf --9---9999---999997098999817445999939999808--9999999999999985
No 83
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.29 E-value=5.1e-09 Score=76.74 Aligned_cols=285 Identities=16% Similarity=0.154 Sum_probs=164.0
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+=+.. -.+..+||-+|+.+++++++++||.+++...-||.- ..+......+.+++.+
T Consensus 63 ~NPT~~~lE~~l---a~LEg~~----~a~~~~SGmaAi~~~lla~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gi~~~~v 135 (397)
T PRK07504 63 SNPTVDMFEKRM---CALEGAE----DARATASGMAAVTAAILCQLKAGDHVVAARALFGSCRYVVETLLPRYGIESTLV 135 (397)
T ss_pred CCHHHHHHHHHH---HHHHCCC----EEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 886499999999---9982998----598734499999999998558999898558875569999999986078589987
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--565799742024202203---203--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. ++++++. .+..-+++.||.+--... +.. .+++.+++++|||-+ +-+...|++. ++|+++-|.
T Consensus 136 d~~-----d~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDiVvhS~ 209 (397)
T PRK07504 136 DGL-----DLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAEIANQAGAKLVVDNVFATPLFQKPLEL-GAHIVVYSA 209 (397)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf 898-----85889974587753999854899974513719999999982995997366221112684562-888799742
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-|+|-.-+ |+|+.+++.+.+.. ..+.. ..|. +++-+.-|.+...| ..+
T Consensus 210 TKyi~GHsDvlgGvv~~~~~~~~~~~--------------~~~~~-----~~G~---~~~p~~a~l~lRGL------~TL 261 (397)
T PRK07504 210 TKHIDGQGRCLGGVVLSDKAWIEEHL--------------QDYFR-----HTGP---SLSPFNAWVLLKGL------ETL 261 (397)
T ss_pred CCCCCCCCCEEEEEEECCHHHHHHHH--------------HHHHH-----HCCC---CCCHHHHHHHHCCC------CCH
T ss_conf 52125887625469955589999999--------------99999-----7188---78837889987167------729
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676688200--------------365317898247310113734567888999998
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
.-|.+||.+++..+-+|+++++..... ..|.. .....+.|.++... +.. ..+...
T Consensus 262 ~lRm~r~~~nA~~iA~~L~~hp~V~~V-~yPgl~s~p~~~~a~k~~~g~gg~~sf~l~~~~------~~~----~~f~~~ 330 (397)
T PRK07504 262 AVRVRQQTESAAAIADFLAGHPKVARV-IYPGRADHPQADIVAKQMTGGSTLVAFELKGGK------EAA----FRFLNA 330 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCH------HHH----HHHHHC
T ss_conf 999999999999999999738995579-798987782788999857998524589982889------999----999980
Q ss_pred HHHCCEEECCCCCCCC----------------------CCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676----------------------750-56861588899999999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA----------------------PLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~----------------------~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
|.--..+..+|+..+. ..+ +|+++| .||++.|++-|+.||++.|
T Consensus 331 L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~lvRlSVG----lEd~eDLi~Dl~~AL~~ir 397 (397)
T PRK07504 331 LKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFIRLSAG----LEDTDDLIEDLEAALKKVR 397 (397)
T ss_pred CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHCC
T ss_conf 891522226787650323764234311899999866979295999960----0899999999999998529
No 84
>PRK07543 consensus
Probab=99.29 E-value=8.5e-09 Score=75.31 Aligned_cols=318 Identities=10% Similarity=0.025 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 689999863210365328---988999999999999999688998-5799974873489998753205789707997073
Q gi|254780153|r 25 PGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391)
|..+++++.+.+-.-.|+ +.-..++-+.+.+.+++-++.+-+ -+|++ +.|++.++..++..++.+||.+++.+=.
T Consensus 46 p~~i~~a~~~al~~~~~~Y~~~~G~~eLR~aia~~~~~~~g~~~~pd~V~v-t~G~~~al~~~~~al~~pGD~Vlv~~P~ 124 (400)
T PRK07543 46 PDNIKQAAIAAINAGKTKYTAVDGIPELKQAICAKFKRENGLDYKPEQVIV-GTGGKQILYNALMATLNPGDEVIIPAPY 124 (400)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 999999999998459998989988099999999999998489988042899-2782699999999857999989982786
Q ss_pred HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCC-CCEEEE
Q ss_conf 68888876532387630674-057776578676785-----5657997420242022032035-----02568-614886
Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESR-EGLVIC 168 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~-~~lliv 168 (391)
|..-. ..+...++..+.+. ....|..+++++++. .+.+.+++=..-||...+..+. ++..+ +.++|.
T Consensus 125 Y~~y~-~~~~~~g~~~v~v~~~~e~~~~~d~~~le~~i~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~~~~~~~v~iis 203 (400)
T PRK07543 125 WVSYP-EMVALAGGTPVFVETTAEFGFKLTPEALEAAITPKTKWFIFNSPSNPTGAAYTRAELKALTDVLVKHPHVWVLT 203 (400)
T ss_pred CCCCH-HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECC
T ss_conf 65536-89998088359952463337543847789747866719998799898883764167899999888753860313
Q ss_pred EECCHH---HHCC------CCCCCCE--EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 401101---1025------4556857--999700120017665--15445677888765411445778312320011232
Q gi|254780153|r 169 DATSAV---FARH------IDFNKLD--VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 169 D~vSs~---g~~p------~d~~~iD--v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
|-+=+- ...+ ++....| +.+.|.-|.++ -|| +|.++..++.+++.....
T Consensus 204 DEiY~~l~~~~~~~~~~~~~~p~~~~~~i~~~s~SK~~~-~~G~RiG~~~~p~~li~~~~~~~----------------- 265 (400)
T PRK07543 204 DDMYEHLVYDDFVFTTPAQVEPSLYDRTLTMNGVSKAYA-MTGWRIGYAAGPAELIKAMDTIQ----------------- 265 (400)
T ss_pred HHHHHHHHCCCCCCCCHHHCCHHHHCCCCCCCCCCHHCC-CCCCCEEEEECCHHHHHHHHHHH-----------------
T ss_conf 124566414897889967829022103420377405206-83430488867899999999999-----------------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC--
Q ss_conf 103347864466644889999999986201031899999999779999999874797167668820036531789824--
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV-- 313 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~-- 313 (391)
..+...++...-++...+|+.-. .=++...+.++++.+.+.+.+....++....++-.+. +-..+.
T Consensus 266 ------~~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rrd~~~~~L~~~~g~~~~~P~g~fy----~~~~~~~~ 333 (400)
T PRK07543 266 ------SQSTSNPCSIAQWAAVEALNGPQ--DFIPANKKIFQERRDLVVSMLNQAKGIDCPTPEGAFY----VYPSCAGL 333 (400)
T ss_pred ------HHHCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE----EEECCHHH
T ss_conf ------75046766099999999985859--9999999999999999999998677984679986689----82110323
Q ss_pred ----CCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ----731011373456788899999-888628287266556767505686158889999999999999999999
Q gi|254780153|r 314 ----DSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 314 ----d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.|..... ... .++.. ++.+.|+++--|..=..+..||++.. .++++++.-++-|+-..++.
T Consensus 334 ~~~~~p~~~~~--~~~----~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~~a--~~~e~l~ea~~Rl~~f~~~l 399 (400)
T PRK07543 334 IGKTTPSGKVI--ETD----EDFVTELLETEGVAVVHGSAFGLGPNFRISYA--TSDELLEEACKRIQRFCASL 399 (400)
T ss_pred HHCCCCCCCCC--CCH----HHHHHHHHHHCCEEEECCCCCCCCCCEEEEEC--CCHHHHHHHHHHHHHHHHHC
T ss_conf 20037556767--999----99999999849999984701089999899975--98999999999999999965
No 85
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.29 E-value=7.6e-09 Score=75.63 Aligned_cols=319 Identities=16% Similarity=0.128 Sum_probs=168.7
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 96899998632103653289889--999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|+ |.+++.+++=...|-+..+ .+...+.-+.|.+++. .+..-+++..|||.++|+++.=.. ..+..++...+
T Consensus 54 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGsEA~e~AiklAr~~t~r~~ii~~~~ 130 (413)
T cd00610 54 HPE-VVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEG 130 (413)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 889-9999999997489725786688899999999998569--9848799818777999999999999739988999868
Q ss_pred CHHHHHHHHHHHCC---------C--CCEEEEECCCCC------CCCHHHCC-----CCCCEEEEEEECCCC---EEECC
Q ss_conf 36888887653238---------7--630674057776------57867678-----556579974202420---22032
Q gi|254780153|r 100 SFGLGWMSDIRQLS---------L--QDVREFTAPYGS------LPDFSKVD-----FDRDVVFVWNGTTSG---VCVPD 154 (391)
Q Consensus 100 ~~~~r~~~~~~~~~---------~--~~~~~~~~~~g~------~~~~~~~~-----~~~~v~~~h~ETstG---v~~~~ 154 (391)
+|=++...-...-+ . .++..+..+... ..+++.++ ....++.+-.|...| +..|.
T Consensus 131 ~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~l~~~~~~~~~~iAavi~EPi~g~~G~~~~~ 210 (413)
T cd00610 131 AYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPP 210 (413)
T ss_pred CCCCCCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 84787663344137832245778888996680898765554322778999999997389978999997987889987388
Q ss_pred ------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf ------0350256861488640110-110--254--55685799970012001766515445677888765411445778
Q gi|254780153|r 155 ------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL 223 (391)
Q Consensus 155 ------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~ 223 (391)
...+|+++++++|+|=|.+ ||- .-+ +.+++.-.+...-|+|++===+|.++.+++..+.... . .
T Consensus 211 ~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~lggG~Pisav~~~~~i~~~~~~---~-~- 285 (413)
T cd00610 211 PGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPA---G-P- 285 (413)
T ss_pred HHHHHHHHHHEEECCCEEEEEECEECCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHC---C-C-
T ss_conf 8997888632860580698520200777545431233258178756523345688986047775999998633---8-8-
Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 31232001123210334786446664488999999998620103189999999977999999987479716766882003
Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR 303 (391)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r 303 (391)
...++|+.--|+ ...+..++|+.+++++ ..++.+++.+.+.+.+.+...-.+++.+ .|
T Consensus 286 ---------------~~h~~T~~gnp~-~~Aaa~a~L~~i~~e~----l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vr 343 (413)
T cd00610 286 ---------------GLHGGTFGGNPL-ACAAALAVLEVLEEEG----LLENAAELGEYLRERLRELAEKHPLVGD--VR 343 (413)
T ss_pred ---------------CEECCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEE--EE
T ss_conf ---------------506778888849-9999999999984256----9999999999999999999974899369--64
Q ss_pred CCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 65317-89824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 304 SNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 304 S~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
..... .+.+.++.... .........+...+.++|+++...+ +..+|+.---.++.+||+.++++||.++
T Consensus 344 G~Gl~~gie~~~~~~~~---~~~~~~~~~i~~~~~~~Gvl~~~~g----~~~l~~~Ppl~it~~eid~~~~~l~~aL 413 (413)
T cd00610 344 GRGLMIGIELVKDRATK---PPDKELAAKIIKAALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EECEEEEEEEECCCCCC---CCCHHHHHHHHHHHHHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 32449999993687767---7589999999999997994891179----9989997883689999999999999869
No 86
>PRK07481 hypothetical protein; Provisional
Probab=99.29 E-value=3.4e-09 Score=77.86 Aligned_cols=334 Identities=13% Similarity=0.075 Sum_probs=167.7
Q ss_pred CHHHHHHHHHHHCCCCCCCCH--HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC------C-CC-C
Q ss_conf 968999986321036532898--89-999999999999996889985799974873489998753205------7-89-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV--LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL------G-YR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~--~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~------~-~~-~ 92 (391)
+|+ |.+++.+++=...|-+. .| .+...+.-+.|.+++. |.+..-+++..||+.++|+++.=.. + ++ .
T Consensus 60 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-p~~~~rv~f~~SGseA~E~AiKlAr~y~~~~g~~~r~ 137 (448)
T PRK07481 60 REE-VKEAIVRQLDELEYYSTFDGTTHPRAIELSYKLIDMFE-PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERT 137 (448)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 799-99999999965677136664468899999999998518-7787889974977999999999999999971898863
Q ss_pred EEEEEECCHHHHHHHHHHHCC-----------CCCEEEEEC------CCCCCCC------HHHC------CCCCCEEEEE
Q ss_conf 079970736888887653238-----------763067405------7776578------6767------8556579974
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLS-----------LQDVREFTA------PYGSLPD------FSKV------DFDRDVVFVW 143 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~-----------~~~~~~~~~------~~g~~~~------~~~~------~~~~~v~~~h 143 (391)
.++...++|=++-..-..--+ ...+..... |++..++ .+.+ .....++.+-
T Consensus 138 ~Ii~~~~syHG~t~g~~s~sg~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi 217 (448)
T PRK07481 138 KFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTQDPEELGRLCARLLEREIAFQGPDTIAAFI 217 (448)
T ss_pred EEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 69963686377662212146884344688899998278268752237778998999999999999998741888479999
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf 202420---22032------035025686148864011011025---4--5568579997001200176-6515445677
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP 208 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~ 208 (391)
.|...| +..|. ...+|+++++++|+|=|.+=.++- + +.+++.-.+...-|+|++= .=++.++.++
T Consensus 218 ~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~lggG~~Plsa~~~~~ 297 (448)
T PRK07481 218 AEPVQGAGGVIVPPANYWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGISSGYVPLGATMVNA 297 (448)
T ss_pred EECCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHCCH
T ss_conf 60466679714599999999999999779279995145388847632576568999971001224358977642111568
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
+..+......... .....++|+..=|+ ...+...+|+.+++++=+++..++-+...+.+.+..+
T Consensus 298 ~i~~~~~~~~~~~---------------~~~~hg~T~~gnpl-a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~ 361 (448)
T PRK07481 298 RIEDAFEANADFG---------------GAIMHGYTYSGHPV-ACAAALASLDIVVREDLPANAAKRGAYLLEGLQPLVE 361 (448)
T ss_pred HHHHHHCCCCCCC---------------CCCCCCCCCCCCHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999765688766---------------52100667788979-9999999999997556999999999999999999998
Q ss_pred HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf 47971676688200365317898247310113734567888999998886282872665567675056861588899999
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL 368 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv 368 (391)
++ +.+.+-..+..+...-.+.|..... ..+........+...+.++|+++.. .|..+|+.--=.++.+|+
T Consensus 362 ~~----~~i~~VRG~Glm~~ielv~d~~~~~-~~~~~~~~~~~v~~~~~~~Gll~~~-----~g~~i~~~PpL~it~~ei 431 (448)
T PRK07481 362 RF----ELVGDVRGKGLMVALDLVADKATRA-PIDPSKGYANAVADVARENGVLVRP-----SGTKIILSPPLVIQREDV 431 (448)
T ss_pred HC----CCEEEEEECCEEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHHHH
T ss_conf 48----9846755224999999960665567-6771279999999999969949972-----499899989978899999
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998
Q gi|254780153|r 369 LLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 369 ~~L~~aLe~~~~~~k~~ 385 (391)
+.++++||.+++++-.|
T Consensus 432 d~~l~~l~~al~~v~~~ 448 (448)
T PRK07481 432 DRIVDALDAGFAAVPFQ 448 (448)
T ss_pred HHHHHHHHHHHHHHCCC
T ss_conf 99999999999975339
No 87
>PRK07482 hypothetical protein; Provisional
Probab=99.29 E-value=3e-08 Score=71.83 Aligned_cols=337 Identities=12% Similarity=0.026 Sum_probs=173.0
Q ss_pred CHHHHHHHHHHHCC--CCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CCCC-C-C
Q ss_conf 96899998632103--653289889-9999999999999968899857999748734899987532------0578-9-7
Q gi|254780153|r 24 RPGWSLGILEGALL--GRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LLGY-R-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l--~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~~~-~-~ 92 (391)
+|+ |.+++.+++- ...|....+ .+...+.-+.|.+++... -.+|+| ..|||.++|+++.= ..+. + .
T Consensus 68 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~-l~~v~f-~~SGSEAvE~AiKlAr~y~~~~g~~~r~ 144 (461)
T PRK07482 68 RTE-VAEAIAEQAKELAYYHTYVGHGTEASIELSKRIIDRAPAG-MSKVYY-GLSGSDANETQIKLVWYYNNVLGRPEKK 144 (461)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCEEEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 499-9999999996587611467756889999999999757888-687996-1866999999999999998861887654
Q ss_pred EEEEEECCHHHHHHHHHHHCC-----------CCCEEEEECCC-------CCCCC------HHHCC------CCCCEEEE
Q ss_conf 079970736888887653238-----------76306740577-------76578------67678------55657997
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLS-----------LQDVREFTAPY-------GSLPD------FSKVD------FDRDVVFV 142 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~-----------~~~~~~~~~~~-------g~~~~------~~~~~------~~~~v~~~ 142 (391)
.++...++|=++...-..--+ ...+.....|+ +.... .++++ ....++.+
T Consensus 145 ~Iis~~~syHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAv 224 (461)
T PRK07482 145 KIISRWRGYHGSGIVTGSLTGLSLFHQHFDLPIDRVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAF 224 (461)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 59996178556753130024663334666799878322468854567886633777789999999999985098848999
Q ss_pred EEECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHC---CC--CCCCCEEEEECCHHCCCCC-CCCEEEEEC
Q ss_conf 4202420---22032------03502568614886401101102---54--5568579997001200176-651544567
Q gi|254780153|r 143 WNGTTSG---VCVPD------VGFIPESREGLVICDATSAVFAR---HI--DFNKLDVVTFSAQKVLGGE-AGFGIIILS 207 (391)
Q Consensus 143 h~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~---p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s 207 (391)
-.|+..| +..|. ...+|+++++++|+|=|.+=.++ .+ +..++.=.+...-|+|++= .=++.++++
T Consensus 225 I~EPi~g~gG~~~p~~~yl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~av~~~ 304 (461)
T PRK07482 225 IGEPVLGTGGIVPPPAGYWEAIQAVLKKYDILLIADEVVTGFGRLGSMFGSQHYGIEPDLITIAKGLTSAYAPLSGSIVG 304 (461)
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCEEEEEEC
T ss_conf 80563576885518878979999996245963771544324750358411116899997776324445776762799856
Q ss_pred HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r 208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI 287 (391)
Q Consensus 208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i 287 (391)
++..+......... . ....++|+.--|+ ...+...+|+.+++++ + .++.+++.+.+.+.+
T Consensus 305 ~~i~~~~~~~~~~~---~------------~~~h~~T~~GnPl-acAaa~a~L~~l~~~~-l---~~~~~~~G~~l~~~L 364 (461)
T PRK07482 305 EKVWDVLEQGSDEH---G------------AMGHGWTYSGHPI-CAAAALANLDILEREN-L---VGNAGEVGAYFRAQL 364 (461)
T ss_pred HHHHHHHHCCCCCC---C------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHH
T ss_conf 88998763265446---6------------6401568999989-9999999999983062-9---999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 74797167668820036531789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r 288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED 367 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d 367 (391)
....--.+.+.+-.-+..+...-.+++...... .+........+...+.++|++....++ ++.+|+.--=.|+.++
T Consensus 365 ~~~~~~~p~v~~VRG~GL~~gvelv~~~~~~~~-~~~~~~~~~~i~~~~~~~Gll~~~~~~---g~vl~~~PPL~Is~~e 440 (461)
T PRK07482 365 RAAFGGHPLVGEVRGVGMLAAVEFVADRDDRTF-FDPALKIGPQVSAAALERGVIARAMPH---GDILGFAPPLVLTRAE 440 (461)
T ss_pred HHHHHCCCCEEEEEECCEEEEEEEEECCCCCCC-CCHHHHHHHHHHHHHHHCCCEEEECCC---CCEEEEECCEECCHHH
T ss_conf 999854998788880675899999505654666-674579999999999978988960599---9989997994088999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999877
Q gi|254780153|r 368 LLLLCDWLRWVFYFQKISFL 387 (391)
Q Consensus 368 v~~L~~aLe~~~~~~k~~~~ 387 (391)
++.+++.|+.++.+.-.+++
T Consensus 441 id~~~~~l~~al~~v~~~~~ 460 (461)
T PRK07482 441 ADEIVAIAAKAVDEVAGRLL 460 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999852
No 88
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.28 E-value=4.8e-08 Score=70.52 Aligned_cols=329 Identities=16% Similarity=0.133 Sum_probs=174.9
Q ss_pred CCCCCCCCCCCCC-CHHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9988868887768-968999986321036-532898--899999999999999968899857999748734899987532
Q gi|254780153|r 11 PKRPFFSSGPCAK-RPGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 11 p~~~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n 86 (391)
|+-.+|+-|=-.. +|..+++++...+-+ ..|=++ =..++-+.+.+.+++.++.+=+-+=++++.|++.++..++..
T Consensus 32 ~dvI~l~~G~pd~~~p~~i~~a~~~~l~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~v~~d~I~vt~G~~~al~~~~~~ 111 (390)
T PRK08361 32 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES 111 (390)
T ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHH
T ss_conf 99389989989998789999999999846888889988879999999999999878898823299877899999999999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE--
Q ss_conf 0578970799707368888876532387630674--057776578676785-----5657997420242022032035--
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-- 157 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-- 157 (391)
++++||.+++-.=.|..- ...+...+ ..+..+ ..+.+..++++++.. .+.+.++.-..-||...+..+.
T Consensus 112 l~~pGD~Vli~~P~Y~~y-~~~~~~~g-~~~~~vpl~~~~~~~~d~~~l~~~~~~~~k~ivl~~P~NPTG~v~s~e~l~~ 189 (390)
T PRK08361 112 LLEQGDEVIIPDPAFVCY-VEDAKIAE-AKPIRIPLREENNFQPDPDELLEAITKRTRMIVINYPNNPTGAVLDKETAKA 189 (390)
T ss_pred HCCCCCEEEECCCCHHHH-HHHHHHCC-CEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 659999899847607779-99999829-9799997158789877999999736546759998899897577866788889
Q ss_pred ---ECCCCCCEEEEEECCHHH---H-CCCCC---C-CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf ---025686148864011011---0-25455---6-857999700120017665--154456778887654114457783
Q gi|254780153|r 158 ---IPESREGLVICDATSAVF---A-RHIDF---N-KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLP 224 (391)
Q Consensus 158 ---~~~~~~~llivD~vSs~g---~-~p~d~---~-~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~ 224 (391)
+|..++.++|.|-+=+-. . .+... . +--+++.|.-|.++ .|| +|.++..++.+++.....
T Consensus 190 l~~la~~~~i~ii~DE~Y~~l~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~v~~~~~i~~~~~~~------ 262 (390)
T PRK08361 190 IADIAEDYNIYILSDEPYEHFLYEDAKHYPMIKFAPDNTILANSFSKTFA-MTGWRLGFVIAPTQVIREMIKLH------ 262 (390)
T ss_pred HHHHHHHCCCEECCHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCHHHCC-CCCCCEEEEEECHHHHHHHHHHH------
T ss_conf 99999863955347065687603887542011313552899802524147-87423799983899999999997------
Q ss_pred CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 12320011232103347864466644889999999986201031899999999779999999874797167668820036
Q gi|254780153|r 225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS 304 (391)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS 304 (391)
..+...++.+.-++...++..-....-++.+.+.++++.+.+.+.+.+.+++....++ +
T Consensus 263 -----------------~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~~rr~~~~~~l~~~~g~~~~~P~----g 321 (390)
T PRK08361 263 -----------------AYVIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLNKMPHITVFEPK----G 321 (390)
T ss_pred -----------------HHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC----E
T ss_conf -----------------6602787689999999998485048999999999999999999999858996866888----6
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 53178982473101137345678889999988-86282872665-5676750-568615888999999999999999999
Q gi|254780153|r 305 NTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
..-+-+.+++... + ...+...+ .+.|+++--|. +...+.+ ||++.. .++++++.-++-|+.++++
T Consensus 322 g~~lw~~l~~~~~---~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~f~--~~~e~l~eal~Rl~~al~~ 389 (390)
T PRK08361 322 AFYVFPKIDETDM---S-------SEDFSEWLLEKARVVVIPGTAFGKMGEGYVRISYA--TSKEKLIEAMERMEKALSK 389 (390)
T ss_pred EEEEEEECCCCCC---C-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
T ss_conf 6699788888898---9-------99999999971999998873228899997999972--9999999999999999971
No 89
>PRK05965 hypothetical protein; Provisional
Probab=99.28 E-value=1.7e-08 Score=73.39 Aligned_cols=332 Identities=11% Similarity=0.021 Sum_probs=172.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH---HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CCC-CC-C
Q ss_conf 96899998632103653289889---9999999999999968899857999748734899987532------057-89-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG---KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LLG-YR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f---~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~~-~~-~ 92 (391)
+|+ |.+++.+++-...|-+.-| .+-..+.-++|.+++ |.+..-+|+..|||.+.|+++.= .-+ ++ .
T Consensus 64 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~~la~~L~~~~--p~~l~~v~f~~SGSEAvE~AlKlar~y~~a~g~~~r~ 140 (459)
T PRK05965 64 QES-IVEAAAKQMRKLPYATGYFHFGSEPAIRLAAELAERA--PGSLNHVYFTLGGSDAVDSAVRFITHYWNATGRPSKK 140 (459)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 799-9999999997567735665668669999999999857--8886879984867999999999999999972799875
Q ss_pred EEEEEECCHHHHHHHHH--------HH-CCC--CCEEEEEC------CCCCCCC------HHHC----C--CCCCEEEEE
Q ss_conf 07997073688888765--------32-387--63067405------7776578------6767----8--556579974
Q gi|254780153|r 93 VDVLAWESFGLGWMSDI--------RQ-LSL--QDVREFTA------PYGSLPD------FSKV----D--FDRDVVFVW 143 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~--------~~-~~~--~~~~~~~~------~~g~~~~------~~~~----~--~~~~v~~~h 143 (391)
.++...++|=++...-+ .+ +.. ........ +.+.... .+.+ + ....++.+-
T Consensus 141 ~ii~~~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~vAAvi 220 (459)
T PRK05965 141 QFIALERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNPVGDDPQAIIAASVAALEAKVAELGADNVAAFF 220 (459)
T ss_pred EEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 79997178589974310257774322356899998623578865568788977889999999999999861887579999
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf 202420---22032------035025686148864011011025---4--5568579997001200176-6515445677
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP 208 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~ 208 (391)
.|...| +..|. ...+|+++++++|+|=|.+=.++- + +.+++.-.+...-|+|++= .=++.+++++
T Consensus 221 ~EPi~g~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgL~gG~~Plsav~~~~ 300 (459)
T PRK05965 221 CEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSD 300 (459)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECH
T ss_conf 54644668853287688799999987569179983054177624474100366618888887343457867516897648
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
+..+......... .....++|+..-|+.. .+...+|+.++++ + ..++.+++.+.+.+.++
T Consensus 301 ~i~~~~~~~~~~~---------------~~~~hg~T~~gnpla~-Aaa~a~L~~l~~~-~---l~~~~~~~g~~l~~~L~ 360 (459)
T PRK05965 301 HVYQGIADGAGAA---------------APVGHGYTYSAHPVSA-AVGLEVLRLYHEG-G---LLANGQAAAPRFAAGLD 360 (459)
T ss_pred HHHHHHHCCCCCC---------------CCCCCCCCCCCCHHHH-HHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHH
T ss_conf 9998761156656---------------5445677899898999-9999999999863-4---99999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf 47971676688200365317898247310113734567888999998886282872665567675056861588899999
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL 368 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv 368 (391)
.+.. .+++.+-..+..+...-.+.|... ....+........+.....++|.++...+ ...+|+.--=.|+.++|
T Consensus 361 ~L~~-~p~i~dVRG~GLm~gielv~d~~~-~~~~~~~~~~~~~i~~~~~~~Glli~~~g----~~vl~l~PPL~It~~ei 434 (459)
T PRK05965 361 ALRA-HPLVGDVRGRGLLGALELVADKAS-KTPFDAALEPADRIFDRAYANGLVFRAFG----DGVLGFAPALCCTEGEF 434 (459)
T ss_pred HHHC-CCCEEEEEECCEEEEEEEECCCCC-CCCCCHHHHHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHHH
T ss_conf 8764-997686782562799997126544-66775547999999999996992998079----99899978820899999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999
Q gi|254780153|r 369 LLLCDWLRWVFYFQKI 384 (391)
Q Consensus 369 ~~L~~aLe~~~~~~k~ 384 (391)
+.+++.|+.++.++=+
T Consensus 435 d~~~~~l~~al~evl~ 450 (459)
T PRK05965 435 DLIFERTRKTLDDVLA 450 (459)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999985
No 90
>PRK07036 hypothetical protein; Provisional
Probab=99.28 E-value=4.2e-08 Score=70.87 Aligned_cols=330 Identities=12% Similarity=0.083 Sum_probs=171.9
Q ss_pred CHHHHHHHHHHHCCCCCCCCH--HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CCC-CC-C
Q ss_conf 968999986321036532898--89-9999999999999968899857999748734899987532------057-89-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV--LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LLG-YR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~--~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~~-~~-~ 92 (391)
+|+ |.+++..++-...|-++ .| .....+..+.|.++. |.+..-+++..|||.++|+++.= ..+ ++ .
T Consensus 69 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGsEA~E~AlKlAr~~~~~~g~~~r~ 145 (466)
T PRK07036 69 REE-MADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELA--PGDLNHVFLTTGGSTAVDSALRFVHYYFNCRGRPAKK 145 (466)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 799-9999999997678606764326899999999999748--8775879983773889999999999998750888760
Q ss_pred EEEEEECCHHHHHHHHHHHCCC-----------CCEEEEECC------CCCCC-C-----HHHCC------CCCCEEEEE
Q ss_conf 0799707368888876532387-----------630674057------77657-8-----67678------556579974
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSL-----------QDVREFTAP------YGSLP-D-----FSKVD------FDRDVVFVW 143 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~~~------~g~~~-~-----~~~~~------~~~~v~~~h 143 (391)
.++...++|=++......--+. ..+..+..| .+... . ..+++ ....++.+-
T Consensus 146 ~ii~~~~syHG~T~~a~s~sg~~~~~~~~~~~~~~v~~~~~p~~~~~p~~~~~~~~~~~~~~~~e~~i~~~~~~~iAa~i 225 (466)
T PRK07036 146 HIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILELGADNIAAFI 225 (466)
T ss_pred EEEECCCCCCCCCHHHHECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 89834897689656562205884456787788875043257765557766523678999999999999861888668998
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---CC---CCCC--EEEEECCHHCCCCC-CCCEEEE
Q ss_conf 202420---22032------035025686148864011011025---45---5685--79997001200176-6515445
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---ID---FNKL--DVVTFSAQKVLGGE-AGFGIII 205 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~d---~~~i--Dv~~a~sQK~l~~p-pGl~~v~ 205 (391)
.|...| +..|. ...+|+++++++|+|=|.+=.++. +- ..++ |++.. -|+|++= .=++.++
T Consensus 226 ~EPi~G~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~~~~~gv~PDiv~~--gKgl~gG~~Pl~av~ 303 (466)
T PRK07036 226 AEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITV--AKGLTSGYQPLGAVI 303 (466)
T ss_pred ECCCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEE--CCCCCCCCCCEEEEE
T ss_conf 566216687130888999999999863790799745642888675520435863889877987--133568877648999
Q ss_pred ECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 67788876541144577831232001123210334786446664488999999998620103189999999977999999
Q gi|254780153|r 206 LSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQ 285 (391)
Q Consensus 206 ~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~ 285 (391)
.+++..+.......+. ..+ ..++|+..=|+ ...+..++|+.+++++ ..+|.+++.+.+.+
T Consensus 304 ~~~~i~~~~~~~~~~~---~~~------------~hg~T~~gnpl-a~Aaa~a~L~~l~~e~----l~~~~~~~G~~l~~ 363 (466)
T PRK07036 304 ISERLVDVISGPNAKG---GVF------------THGFTYSGHPV-ACAAALKNIEIMEREG----LCEHVREVGPYFEE 363 (466)
T ss_pred ECHHHHHHHCCCCCCC---CEE------------ECCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHH
T ss_conf 8599998750467888---455------------03678889989-9999999999986266----99999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCEE-EEE-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCC
Q ss_conf 98747971676688200365317-898-2473101137345678889999988862828726655676750568615888
Q gi|254780153|r 286 FIQENDWIENLAVDETTRSNTSI-CMK-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTV 363 (391)
Q Consensus 286 ~i~~~~~~~~~~~~~~~rS~~~v-~~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i 363 (391)
.++.+.- .+.+.+ .|..... .+. +.|+..... ...+......+...+.++|+++.. .+..+|+.--=.+
T Consensus 364 ~L~~L~~-~p~v~d--VRG~GLm~gie~v~d~~~~~~-~~~~~~~~~~i~~~~~~~Gll~~~-----~g~~~~l~PPL~i 434 (466)
T PRK07036 364 RLASLRE-LPLVGD--VRGDHLMACVECVADKGSKAL-LPEDIAIGQRIDRHCQERGLLVRP-----LEHLCVLSPPLII 434 (466)
T ss_pred HHHHHHC-CCCEEE--EEECCEEEEEEEECCCCCCCC-CCCCHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCC
T ss_conf 9997515-997788--863238999997026654445-771179999999999969949996-----6988999899768
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999877
Q gi|254780153|r 364 EKEDLLLLCDWLRWVFYFQKISFL 387 (391)
Q Consensus 364 ~~~dv~~L~~aLe~~~~~~k~~~~ 387 (391)
+.++++.+++.|+.++.++-.+..
T Consensus 435 t~~eid~~l~~l~~al~ev~~~~~ 458 (466)
T PRK07036 435 TRAQIDEIVAILRAAIEETADELA 458 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999
No 91
>PRK06056 consensus
Probab=99.28 E-value=3.2e-08 Score=71.68 Aligned_cols=333 Identities=15% Similarity=0.072 Sum_probs=176.6
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 8868887768-968999986321036-5328---9889999999999999996889985799974873489998753205
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL 88 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~ 88 (391)
.+|+-|=-.. +|..+++++.+.+.+ ..|+ +.=..++-+.+.+.+++-++.+=+-+=++++.|++.++..++.-++
T Consensus 37 i~l~~G~Pd~~~p~~~~~a~~~a~~~~~~~~Y~~~~G~~eLR~aia~~~~~~~g~~~~~d~I~iT~G~~~al~~~~~~l~ 116 (402)
T PRK06056 37 IGFGAGEPDFPTPDHIVEAAVAACRDPKNHRYTPAAGLPELREAIAAKTLRDSGYEVSPSQVLVTNGGKQAVYEAFATLL 116 (402)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHC
T ss_conf 78889699999889999999999759988857998681999999999999983899880237980681499999999857
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE-----
Q ss_conf 78970799707368888876532387630674-05777657867678-----55657997420242022032035-----
Q gi|254780153|r 89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF----- 157 (391)
Q Consensus 89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~----- 157 (391)
.+||.+++..=.|..- ...+...+...+.+. ..+.+..+++++++ ..+.+.++.=..-||...+..+.
T Consensus 117 ~pGD~Vlv~~P~y~~y-~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~~~~~tk~iil~~P~NPtG~v~s~e~l~~l~~ 195 (402)
T PRK06056 117 DPGDEVILPAPYWTTY-PEAIRLAGGVPVEVVAGADQGYLVTVEQLEAARTERTKVLLFVSPSNPTGAVYSPEQVRAIGR 195 (402)
T ss_pred CCCCEEEEECCCCCCC-HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 9999899817987561-999997289707822373337787999999636668739998489798888742788999999
Q ss_pred ECCCCCCEEEEEECCHH---HHCCC--------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf 02568614886401101---10254--------556857999700120017665--154456778887654114457783
Q gi|254780153|r 158 IPESREGLVICDATSAV---FARHI--------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLP 224 (391)
Q Consensus 158 ~~~~~~~llivD~vSs~---g~~p~--------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~ 224 (391)
+|..++.++|.|-+=+- .+.+. ++..--+++.|.-|.++ -|| +|.++..++.+++....+.
T Consensus 196 la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~~~-~~G~R~G~~v~~~~~i~~~~~~~~----- 269 (402)
T PRK06056 196 WAAEHGIWVISDEIYEHLVYDGAVFTSIPAAVPELADRCIVVNGVAKTYA-MTGWRVGWMIGPADVIKAATNLQS----- 269 (402)
T ss_pred HHHHHCCCEECCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCC-CCCCEEEEEEECHHHHHHHHHHHH-----
T ss_conf 99971461551044321135898888888865454146447520113355-765307999708999999999986-----
Q ss_pred CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 12320011232103347864466644889999999986201031899999999779999999874797167668820036
Q gi|254780153|r 225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS 304 (391)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS 304 (391)
..+.++++. .-++...+|..-. ..++.+.+.++++.+.+.+.+...+++....++-.+
T Consensus 270 -----------------~~~~~~~~~-~q~~a~~al~~~~--~~~~~~~~~~~~rr~~~~~~L~~~~~~~~~~P~G~~-- 327 (402)
T PRK06056 270 -----------------HATSNVSNV-SQRAALAAVSGPL--DAVAEMREAFDRRRRTIVRMLNAIPGVSCPTPDGAF-- 327 (402)
T ss_pred -----------------HCCCCCCHH-HHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEE--
T ss_conf -----------------545774229-9999999985889--999999878999999999999867992735888446--
Q ss_pred CCEEEEEECCC---CCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 53178982473---101137345678889999988-86282872665567675056861588899999999999999999
Q gi|254780153|r 305 NTSICMKIVDS---DIASLDINSQKSFCKSMLSFL-EKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 305 ~~~v~~~~~d~---~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
-+-..+.+- ......... ..++...+ .+.|+++--|..=....-|||+.- .++++++.-++-|+.+++
T Consensus 328 --y~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~e~gV~v~PG~~Fg~~g~~Risfa--~~~e~l~eal~RL~~~l~ 399 (402)
T PRK06056 328 --YAYPDVKALLGREIRGRRPQT----SAELAALILEEAEVAVVPGEAFGTPGYLRLSYA--LGDDDLVEGVRRLQELLS 399 (402)
T ss_pred --EEEEECHHHCCCCCCCCCCCC----HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf --997755453363225899899----999999999709899974844489983999970--899999999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780153|r 381 FQK 383 (391)
Q Consensus 381 ~~k 383 (391)
+.|
T Consensus 400 e~k 402 (402)
T PRK06056 400 EAK 402 (402)
T ss_pred HCC
T ss_conf 568
No 92
>PRK07682 hypothetical protein; Validated
Probab=99.27 E-value=4.6e-08 Score=70.66 Aligned_cols=313 Identities=12% Similarity=0.077 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 689999863210----365328988999999999999999688998--57999748734899987532057897079970
Q gi|254780153|r 25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSLLGYRGVDVLAW 98 (391)
Q Consensus 25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~ 98 (391)
|..+++++...+ .++++ +.-..++-+.+.+-+++-++..-+ .+|+ ++.|++.++..++..++.+||.+++..
T Consensus 35 p~~i~ea~~~~~~~g~~~Y~~-~~G~~~lreaia~~~~~r~g~~~~p~~~i~-vt~G~~~al~~~~~~l~~pGD~Vlv~~ 112 (378)
T PRK07682 35 PWNVREASIRSLEQGYTSYTA-NAGLLELRQEIAKYLKKRFAVSYDPNDEII-VTVGASQALDVAMRAIINPGDEVLIVE 112 (378)
T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCEEE-ECCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 899999999998569999899-988899999999999998489999777599-907859999999999659999899925
Q ss_pred CCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEE
Q ss_conf 7368888876532387630674-05777657867678-----5565799742024202203203-----50256861488
Q gi|254780153|r 99 ESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVI 167 (391)
Q Consensus 99 g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~lli 167 (391)
=.|..- ...+...+...+.+. ..+.+...++++++ ..+.+.++.=..-||...+..+ .+|..++.++|
T Consensus 113 P~Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~~~~~~k~iil~~P~NPtG~v~s~~el~~l~~la~~~~i~ii 191 (378)
T PRK07682 113 PSFVSY-APLVTLAGGVPVPVATSLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHNLIVL 191 (378)
T ss_pred CCHHHH-HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
T ss_conf 850527-9999981885699402654586379999997365268389982897988888899999999997644596795
Q ss_pred EEECCHHHHC--C-CC---CC---CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 6401101102--5-45---56---857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r 168 CDATSAVFAR--H-ID---FN---KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 168 vD~vSs~g~~--p-~d---~~---~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
.|-+=+-... + .. .. .--+++.|.-|.++ .|| +|.++.+++.+++..... +
T Consensus 192 sDEiY~~l~~~~~~~~~~~~~~~~~~~i~~~s~SK~f~-l~G~R~G~~~~~~~~~~~~~~~~---------------~-- 253 (378)
T PRK07682 192 SDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFA-MTGWRLGMIAAPVYFSEAMLKIH---------------Q-- 253 (378)
T ss_pred CCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHCC-CCCCCEEEEEECHHHHHHHHHHH---------------H--
T ss_conf 22014653069876776552564445420234124207-85730698970899999999999---------------7--
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
..+..+| +..-++...+++.-.+ -++.+.+.++++.+.+.+.+...+ +.... |+ +..-+-..+.+..
T Consensus 254 -----~~~~~~~-~~~q~aa~~al~~~~~--~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~--P~--g~~~~~~~~~~~~ 320 (378)
T PRK07682 254 -----YSMMCAP-TMAQFAALEALRNGND--DVERMRDSYRKRRNFFVTSLNEIG-LTCHV--PG--GAFYAFPSISSTG 320 (378)
T ss_pred -----HCCCCCC-HHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CC--EEEEEEEECCCCC
T ss_conf -----5567798-4899999999975768--799999999999999999999759-82206--88--6789957878889
Q ss_pred CCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 011373456788899999-8886282872665-5676750-56861588899999999999999999999
Q gi|254780153|r 317 IASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
. + ...+.. .+.++|+++--|. +...+.+ +|++.. .+.+.++.-++-|+.++++.|
T Consensus 321 ~---~-------~~~~~~~ll~~~~V~v~PG~~Fg~~g~~~iRl~~a--~~~e~l~eal~Rl~~~l~~~k 378 (378)
T PRK07682 321 L---S-------SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENKK 378 (378)
T ss_pred C---C-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 8---9-------99999999996999998862228999897999961--999999999999999998469
No 93
>PRK08069 consensus
Probab=99.27 E-value=2.6e-08 Score=72.21 Aligned_cols=315 Identities=10% Similarity=0.037 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 6899998632103----653289889999999999999996889985799974873489998753205789707997073
Q gi|254780153|r 25 PGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391)
Q Consensus 25 p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391)
|..+++++.+.+- ++++ +.=..++-+.+.+.+++-++.+=+-+=++++.|++.++..++.-++++||.+++-.=.
T Consensus 45 p~~i~~a~~~~~~~~~~~Y~~-~~G~~~lreaia~~~~~~~g~~~~p~~V~it~G~~~al~~~~~~l~~pGD~Vlv~~P~ 123 (390)
T PRK08069 45 PEHIIDAAHKAMNEGHTKYTP-SGGLQALKQEIVKKFKRDQGLAYDPSEIIVCTGAKHALYTLFQVLLDEGDEVIIPTPY 123 (390)
T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 899999999998548998989-9672999999999999986899881118987888999999999727998989980686
Q ss_pred HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEE
Q ss_conf 68888876532387630674-05777657867678-----5565799742024202203203-----5025686148864
Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICD 169 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD 169 (391)
|..- ...+...++..+.+. ....+..+++++++ ..+.+.++.=..-||...+..+ .+|..++.++|.|
T Consensus 124 Y~~y-~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k~iil~~P~NPTG~v~s~e~l~~i~~la~~~~~~vi~D 202 (390)
T PRK08069 124 WVSY-PEQVKLAGGKPVYVEGLEDNDFKITAEQLEEAITEKTKAVIINSPSNPTGMIYTKEELAALGEVCLEHDILIVSD 202 (390)
T ss_pred CCCH-HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE
T ss_conf 6427-999998188048714566678767999999854436858998899698681655068999999987563059853
Q ss_pred ECCH---HHHCC-C-------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 0110---11025-4-------556857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r 170 ATSA---VFARH-I-------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 170 ~vSs---~g~~p-~-------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
-+=+ +.+.+ . ++.+--+++.|.-|.++. || +|.++..++.+++..... .
T Consensus 203 EiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~~-~G~RiG~~~~~~~li~~~~~~~------------~----- 264 (390)
T PRK08069 203 EIYEKLIYGGAEHVSIAQLSNELKEQTIIINGVSKSHSM-TGWRIGYAAGNKQIIKAMTNLA------------S----- 264 (390)
T ss_pred HHHHHHCCCCCCCCCHHHHCCCCCCCCCEECCCHHHCCC-CCCCEEEEECCHHHHHHHHHHH------------H-----
T ss_conf 323654069989889899495434564100353020377-6323588766999999999998------------6-----
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
..+ ..|+...-++...++..- +.-++.+.+.++++.+.+.+.+...+++....++-. .-+-..+++..
T Consensus 265 -----~~~-~~~~~~~q~aa~~a~~~~--~~~~~~~~~~~~~r~~~~~~~l~~~~g~~~~~P~Gg----~ylw~~~~~~~ 332 (390)
T PRK08069 265 -----HST-SNPTSIAQYGAIAAYAGS--QEPVETMRQAFEERLNIIYDKLIQIPGFTCIKPQGA----FYLFPNVKEAA 332 (390)
T ss_pred -----HCC-CCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE----EEEEEECCHHH
T ss_conf -----535-777639999999998688--687999999999999999999850668851479803----89978773111
Q ss_pred CCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 011373456788899999-88862828726655676750568615888999999999999999
Q gi|254780153|r 317 IASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
........ ..+.. .+.+.|+++--|..=..+..||++.- .+++.++.-++-|+.+
T Consensus 333 -~~~~~~~~----~~~~~~ll~~~gV~v~PG~~Fg~~~~~Rl~fa--~~~~~l~eal~RL~~~ 388 (390)
T PRK08069 333 -ALSGFETV----DEFVKALLEEEKVALVPGSGFGAPDNVRLSYA--TSLELLEEAIERIHRF 388 (390)
T ss_pred -CCCCCCCH----HHHHHHHHHHCCEEEECCCCCCCCCCEEEEEE--CCHHHHHHHHHHHHHH
T ss_conf -22678889----99999999859999981876799983899984--9999999999999998
No 94
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.27 E-value=1.3e-08 Score=74.23 Aligned_cols=322 Identities=15% Similarity=0.145 Sum_probs=186.3
Q ss_pred HHHHHHHHHCCC---------CCCCCHHHHHHH-HHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHHHHHCCCCCCEEE
Q ss_conf 999986321036---------532898899999-999999999968899-857999748734899987532057897079
Q gi|254780153|r 27 WSLGILEGALLG---------RSHRCVLGKERI-NKAIQLTRKVLEVPE-NYRIAIVPASDTGAVEMALWSLLGYRGVDV 95 (391)
Q Consensus 27 ~v~~~~~~~~l~---------~sHRs~~f~~i~-~~~~~~l~~l~~~p~-~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~ 95 (391)
.|++++...+-+ +++.+.++.+.+ .-+.++.+++|+... .|.+=+-+-||+.|+-|+.+.|++|||.++
T Consensus 46 ~v~~a~gS~ltnkYaEGyPg~Ryy~G~e~iD~iE~la~~ra~~lF~~~~~~wgaNVqp~SGs~AN~av~~all~pGD~im 125 (450)
T PTZ00094 46 AVLECLGSVFTNKYAEGYPGNRYYGGTEVVDKIENLCQKRALAAFNLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIM 125 (450)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 99998577423745588998445466425999999999999998389854366105768669999999999707999799
Q ss_pred EEE----CCHHHHHHHHHHHCCCC----CEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEEC
Q ss_conf 970----73688888765323876----306740-57776578676785-----565799742024202203--203502
Q gi|254780153|r 96 LAW----ESFGLGWMSDIRQLSLQ----DVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIP 159 (391)
Q Consensus 96 ~~~----g~~~~r~~~~~~~~~~~----~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~ 159 (391)
... |+.+........+.+.. +...+. .+.+ ..|.+++.. .+.+.++- .++.--..| ....++
T Consensus 126 ~l~l~~GGHltHG~~~~~~~v~~sg~~~~~~~Y~vd~~~-~IDyd~~~~~a~~~kPklIi~G-~Say~r~id~k~~reIa 203 (450)
T PTZ00094 126 GLDLPSGGHLTHGFYTAKKKVSATSIFFESLPYQVNEEG-LIDYDKLEKLAKAFRPKLIIAG-ASAYPRDIDYKRFREIC 203 (450)
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC-CCCHHHHHHHHHHHCCCEEEEC-CCCCCCCCCHHHHHHHH
T ss_conf 843566886554334677775401345556773246489-7489999999986199879988-82542543879999999
Q ss_pred CCCCCEEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 5686148864011011-----02545568579997001200176651544567788876541144577831232001123
Q gi|254780153|r 160 ESREGLVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 160 ~~~~~llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
...++++++|+.--.| ..|=++...|++.++.+|.|-||-| +++..+++.-+...+.
T Consensus 204 d~vGA~l~~D~AHiaGLIAgg~~psP~~~ADvVT~TTHKTLrGPrG-GiIl~~k~~~~e~~~k----------------- 265 (450)
T PTZ00094 204 DSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GMIFFRKKIRPDIESK----------------- 265 (450)
T ss_pred HHCCCEEEEECHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCCCHHHHHHH-----------------
T ss_conf 9739989963144444320455798434550475222234778984-2898446640899998-----------------
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
.....+ ..+-..|-.+.|.++..++.+.... ......++..++++.+-+.+...+ +.... ...-+..+ .+.+.+
T Consensus 266 Id~aVF-Pg~qggph~h~IAa~Ava~~Ea~~~-efk~Ya~qVv~NAkaLa~~L~~~G-~~vvs--ggTdnHlv-lvDl~~ 339 (450)
T PTZ00094 266 INQAVF-PGLQGGPHFHQIAAIAVQLKEVCSP-EWKEYAKQVVDNAKALAAELEKRG-FDLVT--GGTDNHLI-LWNLRP 339 (450)
T ss_pred HCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEEE--CCCCCEEE-EEECCC
T ss_conf 545128-8544677787999999999997576-799999999999999999999789-96950--89976279-997777
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC---CCC--CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 310113734567888999998886282872665---567--67505686158----88999999999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS---YRD--APLGLRVWVGV----TVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~r~--~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
-.+ . -+..-..|.+.|+.+.-+. -++ .+.|+|||+-. -..++|+..+.+.|+.+.+..+-
T Consensus 340 ~g~-------~---G~~ae~~Le~~gI~~NkN~iP~D~~~~~~SGiRiGT~a~TtrGm~e~em~~ia~lI~~~i~~~~~ 408 (450)
T PTZ00094 340 FGI-------T---GSKVEKLLDAVNISVNKNTIPGDKSALAPSGIRLGTPALTSRGAVEEDFEFVADFLDRAVKLAQD 408 (450)
T ss_pred CCC-------C---HHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 899-------9---99999999874938747879999999998703316778883899889999999999999999998
No 95
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.26 E-value=3.9e-08 Score=71.13 Aligned_cols=297 Identities=15% Similarity=0.072 Sum_probs=175.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH
Q ss_conf 96899998632103653289889999999999999996889985799974873489998753205789707997073688
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL 103 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~ 103 (391)
+|. +++++.... ...||=|+... .+.++.|.+.++++.+ +|+ ++.|++.++..++..++++|+.+++..-+|+.
T Consensus 53 sp~-v~~a~~~~~-~~~~rYPd~~~--~~Lr~aiA~~~gv~~~-~I~-v~nGs~e~i~~~~~a~~~pGd~Vl~~~Ptf~~ 126 (374)
T PRK05166 53 SPA-LARLFPDIA-ELLRLYPDPQG--RALRAEIAASFGVPTD-QII-LGNGSEDLIAVICRAVLRPGDRVVTLYPSFPL 126 (374)
T ss_pred CHH-HHHHHHHHH-HHCCCCCCCCH--HHHHHHHHHHHCCCHH-HEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCCHHH
T ss_conf 999-999999868-75376979878--9999999999683830-199-85689999999999997399989877887778
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCHHHC----C-CCCCEEEEEEECCCCEEECCEEE--EC--CCCCCEEEEEECC-H
Q ss_conf 888765323876306740577765786767----8-55657997420242022032035--02--5686148864011-0
Q gi|254780153|r 104 GWMSDIRQLSLQDVREFTAPYGSLPDFSKV----D-FDRDVVFVWNGTTSGVCVPDVGF--IP--ESREGLVICDATS-A 173 (391)
Q Consensus 104 r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~v~~~h~ETstGv~~~~~~~--~~--~~~~~llivD~vS-s 173 (391)
. ....+..+..+..+........+++++ . ..+.+.++.=..-||...+..++ +. ...+.++|+|-.= .
T Consensus 127 Y--~~~~~~~G~~v~~vpl~~~~~~d~~~l~~ai~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vvvDEaY~e 204 (374)
T PRK05166 127 H--EDYPTLMGARVERVTVTPDLTVDVDALLAAVARKPRMLMFSNPMNPVGSWLTPGALARLLDAVPPETLIVVDEAYAE 204 (374)
T ss_pred H--HHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHH
T ss_conf 9--99999829815997368667979999998615698789982898998765884779999974588739995047899
Q ss_pred HHHC---C--CC-CCCC--E-EEEECCHHCCCCCCCCEEE--EECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCC
Q ss_conf 1102---5--45-5685--7-9997001200176651544--5677-888765411445778312320011232103347
Q gi|254780153|r 174 VFAR---H--ID-FNKL--D-VVTFSAQKVLGGEAGFGII--ILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFC 241 (391)
Q Consensus 174 ~g~~---p--~d-~~~i--D-v~~a~sQK~l~~ppGl~~v--~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (391)
|... + +. ..+- . +++-+.-|.++ -||+=+- ++++ +..+...+.
T Consensus 205 f~~~~~~~~~~~~~~~~~~n~IvlrSfSK~~g-laGlRvGyai~~~~~i~~~l~~~------------------------ 259 (374)
T PRK05166 205 YAAGDDYPSALTLLKNRGLPWVVLRTFSKAYG-LAGLRIGYGLVSDPSLRAFLDRV------------------------ 259 (374)
T ss_pred HHCCCCCCCHHHHHHHCCCCEEEEEECCHHHH-CCCCCEEEEECCCHHHHHHHHHH------------------------
T ss_conf 75278866479886204787799995556551-57775045415929999999983------------------------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCC
Q ss_conf 8644666448899999999862010318999999997799999998747971676688200365317898-247310113
Q gi|254780153|r 242 GETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASL 320 (391)
Q Consensus 242 ~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~ 320 (391)
+.+++-+.....+...+|+ .++-++...+...+..+.+++.+.+.+ +..+ -|.++..+. +..+
T Consensus 260 -~~~~~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~~g-~~v~------ps~anFilv~~~~~----- 323 (374)
T PRK05166 260 -RTPFNANGIAQAAALAALD---DEEHLAKGVALALAERERMKKELAEMG-YRVA------PSRANFLFFDARTD----- 323 (374)
T ss_pred -CCCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCEEEEEECCCC-----
T ss_conf -4982869999999999856---999999999999999999999999777-9489------98661899868999-----
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
...+...|.++|+++.-+.......-+||+.+ ++++.++|+++|+.+++
T Consensus 324 --------~~~~~~~L~~~gI~Vr~~~~~gl~~~lRIsvg---t~een~rll~aL~~il~ 372 (374)
T PRK05166 324 --------ASALAEALLRQGVIVKPWKQPGFETYIRVSIG---SPEENDHFMAALDEVLA 372 (374)
T ss_pred --------HHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHH
T ss_conf --------99999999848919985898999998999818---99999999999999985
No 96
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.26 E-value=4.9e-09 Score=76.85 Aligned_cols=279 Identities=18% Similarity=0.165 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEEE
Q ss_conf 889999999999999996889985799974873489998753205789707997073688--888765323876306740
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREFT 121 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~~ 121 (391)
.+-.+.++ +.|..+-+... ++. .+||-+|+.+ +++++++|+.+++...-||. ++++......+..++..+
T Consensus 51 nPt~~~le---~~la~LEg~~~---a~~-f~SGmaAi~~-~l~~l~~Gd~vv~~~~~Yg~t~~~~~~~l~~~Gi~~~~~d 122 (366)
T PRK08247 51 NPTRGLLE---QAIADLEGGDQ---GFA-CSSGMAAIQL-VMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWGVRFVYVN 122 (366)
T ss_pred CHHHHHHH---HHHHHHHCCCC---EEE-CCCHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEC
T ss_conf 86799999---99999829850---531-1668999999-9997389998999589686488998877507746999848
Q ss_pred CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCE---E--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf 57776578676785--56579974202420220320---3--502568614886401--101102545568579997001
Q gi|254780153|r 122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDV---G--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ 192 (391)
Q Consensus 122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~---~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ 192 (391)
.. ++++++. ....-+++.||.+--.+... . .+++.+++++|||-+ +-+...|++. ++|+++-|.-
T Consensus 123 --~~---d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~~~Pl~~-GaDivihS~T 196 (366)
T PRK08247 123 --TA---SIKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLTE-GADIVIHSAT 196 (366)
T ss_pred --CC---CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHC-CCCEEEEECC
T ss_conf --88---97999975386754999855999853501599999998646704984177344133574102-8978997424
Q ss_pred HCCCCCCCCE--EEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 2001766515--445677-8887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 193 KVLGGEAGFG--IIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 193 K~l~~ppGl~--~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
|-++|-+.+- .++.+. +..++... + .+ ..|. ++.-+.-|.+...| ..+
T Consensus 197 Kyi~GhsDvl~G~vv~~~~~~~~~l~~------------~---~~-----~~G~---~~~p~~a~l~~rGl------~TL 247 (366)
T PRK08247 197 KYLGGHNDVLAGLVVAKGQELCERLAY------------Y---QN-----AAGA---VLSPFDSWLLIRGM------KTL 247 (366)
T ss_pred CCCCCCCCEEEEEEEECCHHHHHHHHH------------H---HH-----HCCC---CCCHHHHHHHHCCC------CCH
T ss_conf 201588871547997273888889999------------9---97-----3366---77937777886352------509
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCC
Q ss_conf 99999999779999999874797167668820036531789824731011373456788899999888628287266556
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYR 349 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r 349 (391)
.-|.+|+.+++..+.+|+++++.... |..|.. ...+.|.+.+.. ....+...|.--..+..+|+.+
T Consensus 248 ~lR~~~~~~nA~~lA~~L~~hp~V~~-V~yPG~--gg~~sf~l~~~~-----------~~~~f~~~l~l~~~a~SlGg~e 313 (366)
T PRK08247 248 ALRMRQHEENAKALAAFLNEQPGVTD-VLYPGK--GGMLSFRLQDEE-----------WVNPFLKSLKLITFAESLGGVE 313 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEE-EECCCC--CCEEEEEECCHH-----------HHHHHHHHCCCCEEECCCCCCC
T ss_conf 99999999999999999861997048-956998--777999978889-----------9999998474366812657677
Q ss_pred CC------------C----------C-EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 76------------7----------5-056861588899999999999999999999
Q gi|254780153|r 350 DA------------P----------L-GLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 350 ~~------------~----------~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
+. + . -+|++++ .||++.|++-|+.||++.|
T Consensus 314 SLi~~pa~~th~~~~~~~r~~~Gi~~~liRlSvG----LEd~~DLi~Dl~qAL~~i~ 366 (366)
T PRK08247 314 SFITYPATQTHMDIPEEIRIANGVCNRLLRFSVG----IENVEDLKADLKQAFKQVK 366 (366)
T ss_pred CEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHCC
T ss_conf 2445764245422899999975989295999950----0899999999999999539
No 97
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.26 E-value=4.5e-08 Score=70.71 Aligned_cols=322 Identities=11% Similarity=-0.003 Sum_probs=165.9
Q ss_pred CHHHHHHHHHHHCCCCCCCCHH-H-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 9689999863210365328988-9-999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVL-G-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~-f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|+ |.+++.+++-..-|-++- | .+-..+.-+.|.+++-.+-+.+|+| ..|||.++|+++.=.- ..+..++...+
T Consensus 63 ~p~-v~~Ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f-~~SGsEAvE~AlKlAr~~tgr~~ii~~~~ 140 (448)
T PRK08593 63 PPE-VVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTF-GLSGSDANDGIIKFARAYTGRPYIISFTN 140 (448)
T ss_pred CHH-HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE-CCCHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 899-9999999984076736663146799999999998578676637997-18757899999999975489987999947
Q ss_pred CHHHHHHHHHHHCC---------C---CCEEEEECCC------CCCCC------HHHC----C---CCCCEEEEEEECCC
Q ss_conf 36888887653238---------7---6306740577------76578------6767----8---55657997420242
Q gi|254780153|r 100 SFGLGWMSDIRQLS---------L---QDVREFTAPY------GSLPD------FSKV----D---FDRDVVFVWNGTTS 148 (391)
Q Consensus 100 ~~~~r~~~~~~~~~---------~---~~~~~~~~~~------g~~~~------~~~~----~---~~~~v~~~h~ETst 148 (391)
+|-++...-..--+ + ..+..+..|. ++..+ .+.+ + ....++.+-.|...
T Consensus 141 ~yHG~T~ga~s~sg~~~~~~~~~~p~~p~~~~vp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPvq 220 (448)
T PRK08593 141 AYHGSTYGSLSMSAISLNMRKKYGPLLPGFYHIPFPDKYRGMYEEPQANSVEEYLAPLKEMFEKYVPADEVACIVIETIQ 220 (448)
T ss_pred CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf 87768734001047875654456899999578079863345457870679999999999999851788976999997887
Q ss_pred C---EEECC------EEEECCCCCCEEEEEECCH-HHHC--CC--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHH
Q ss_conf 0---22032------0350256861488640110-1102--54--55685--7999700120017665154456778887
Q gi|254780153|r 149 G---VCVPD------VGFIPESREGLVICDATSA-VFAR--HI--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVE 212 (391)
Q Consensus 149 G---v~~~~------~~~~~~~~~~llivD~vSs-~g~~--p~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~ 212 (391)
| +..+. ...+|+.+++++|+|=|.+ +|-- -+ +..++ |++..| |+|++===++.++.+++..+
T Consensus 221 g~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~Plsav~~~~ei~~ 298 (448)
T PRK08593 221 GDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMTFG--KSLAGGMPMSAIVGRKEIME 298 (448)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCEEEEC--CCCCCCCCEEEEEECHHHHH
T ss_conf 8889873887886899999986680698743001777567603554305288867773--00258874079987589885
Q ss_pred HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 65411445778312320011232103347864466644889999999986201031899999999779999999874797
Q gi|254780153|r 213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW 292 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~ 292 (391)
... . ....+|+.- +-....+..++|+.+++++ ..++.+++.+.+++.+++..-
T Consensus 299 ~~~---~-------------------~~h~~T~~G-npla~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~ 351 (448)
T PRK08593 299 SLE---A-------------------PAHLFTTGA-NPVSCEAALATIDMIEDES----LLQASAEKGEYVRKRFDQWVS 351 (448)
T ss_pred HCC---C-------------------CCCCCCCCC-CHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHH
T ss_conf 217---8-------------------865657899-9899999999999997443----999999999999999999986
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 16766882003653178982473101137345678889999988862828726655676750568615888999999999
Q gi|254780153|r 293 IENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLC 372 (391)
Q Consensus 293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~ 372 (391)
-.+.+.+-.-+..+...-.+.++.....+. .....+...+.++|+++.. ..+..+|+.--=.++.++|+.++
T Consensus 352 ~~p~v~dVRG~GL~~giElv~~~~~~~~~~----~~~~~v~~~~~~~Gll~~~----~~gn~ir~~PpL~it~~eid~~~ 423 (448)
T PRK08593 352 KYNFVGDVRGKGLSIGIDIVSDKKLKTRDA----EAALKICNYCFEHGVVIIA----VAGNVLRFQPPLVITYEQLDTAL 423 (448)
T ss_pred CCCCEEEECCCCEEEEEEEEECCCCCCCCH----HHHHHHHHHHHHCCEEEEE----CCCCEEEEECCCCCCHHHHHHHH
T ss_conf 299788730255178999964555578888----9999999999978908986----79998999789008899999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 373 DWLRWVFYFQKI 384 (391)
Q Consensus 373 ~aLe~~~~~~k~ 384 (391)
+.|+.++.++++
T Consensus 424 ~~l~~al~~l~a 435 (448)
T PRK08593 424 NTIEDALTALEA 435 (448)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999874
No 98
>PRK06148 hypothetical protein; Provisional
Probab=99.25 E-value=2.5e-08 Score=72.35 Aligned_cols=320 Identities=14% Similarity=0.064 Sum_probs=174.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---CCCCCEEEEEECC
Q ss_conf 9689999863210365328988999999999999999688998579997487348999875320---5789707997073
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---LGYRGVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~~~~~~~~~~~g~ 100 (391)
+|+ |.+++++++--.+|-+--+..-..+.-++|..++ |+.-..+|+..|||.|.|+++.=- .++.+.+...+++
T Consensus 642 hP~-v~~ai~~Q~~~L~t~t~y~~~~~~~lAerL~~~~--P~~l~~vfF~NSGSEAnE~AiKlAr~~tgr~~iI~~~~aY 718 (1015)
T PRK06148 642 HPR-VVEAAARQAARLNTNTRYLHDAIVAYAERLTATL--PEGLTVASFVNSGSEANSLALRLARAHTGARDAIVLDWAY 718 (1015)
T ss_pred CHH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC--CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 989-9999999997624266656836999999999847--7776557630773889999999999860899748860355
Q ss_pred HHHHHHHHHHHCC-------C----CCEEEEECC------CCCCCC------HHHC-------C-CCCCEEEEEEECCCC
Q ss_conf 6888887653238-------7----630674057------776578------6767-------8-556579974202420
Q gi|254780153|r 101 FGLGWMSDIRQLS-------L----QDVREFTAP------YGSLPD------FSKV-------D-FDRDVVFVWNGTTSG 149 (391)
Q Consensus 101 ~~~r~~~~~~~~~-------~----~~~~~~~~~------~g~~~~------~~~~-------~-~~~~v~~~h~ETstG 149 (391)
.| +-..-+.--+ + ..+.....| ++.... .+.+ . ....++.+-.|+..|
T Consensus 719 HG-~T~gals~s~~~~~~~~g~~~~~~v~~~~~P~~yr~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~Aa~I~EpIqg 797 (1015)
T PRK06148 719 HG-TTQELIDLSPYKFKRKGGKGRPDHVEEAEVPDSYRAPERWPDAEHGRRFAESVAEQIAAMRAQGRAPAFFIAESIPS 797 (1015)
T ss_pred CC-CCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 68-63667763677455677889998537788997656777898167899999999999999871588158999788337
Q ss_pred E---EECC------EEEECCCCCCEEEEEECCHHHHCCCC-CC-----CC--EEEEECCHHCCCCCCCCEEEEECHHHHH
Q ss_conf 2---2032------03502568614886401101102545-56-----85--7999700120017665154456778887
Q gi|254780153|r 150 V---CVPD------VGFIPESREGLVICDATSAVFARHID-FN-----KL--DVVTFSAQKVLGGEAGFGIIILSPASVE 212 (391)
Q Consensus 150 v---~~~~------~~~~~~~~~~llivD~vSs~g~~p~d-~~-----~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~ 212 (391)
. ..+. ...+|.++|+++|+|=|++=.++-=. || ++ |++ ..-|.||+===+|.++.+++..+
T Consensus 798 ~gG~~~~p~gyl~~v~~~c~~~G~LlI~DEVQtGfGRTG~~~fa~e~~gV~PDIv--t~aKglg~G~PlgAv~~~~ei~~ 875 (1015)
T PRK06148 798 VAGQVFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV--TMGKPIGNGHPMSAVVTTREIAD 875 (1015)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEHHCCCCCCEE--EECCCCCCCCCCEEEEECHHHHH
T ss_conf 8884079889999999999983978999545338782366300003129988879--86564447867678898599997
Q ss_pred HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 65411445778312320011232103347864466644889999999986201031899999999779999999874797
Q gi|254780153|r 213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW 292 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~ 292 (391)
... .. ...++|+.--|+ ...+..++|+.|++++ ..++.++..+.+.+.+..+..
T Consensus 876 ~f~---~g------------------~~~~sTfgGnPl-acAaalavLdii~~e~----L~~na~~~G~~l~~~L~~L~~ 929 (1015)
T PRK06148 876 SFD---NG------------------MEYFNTFGGNPV-SCAIGLAVLDIIEDED----LRRNALEIGNYLLAGFRSLQQ 929 (1015)
T ss_pred HHC---CC------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHH
T ss_conf 542---68------------------752688786999-9999999999998737----999999999999999999886
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 1676688200365317898247310113734567888999998886282872665-567675056861588899999999
Q gi|254780153|r 293 IENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLL 371 (391)
Q Consensus 293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L 371 (391)
-.+++.+-.-++.+.-.=.+.|.....- .......+...+.++|++++..| | ++.+||---=.++.++++.+
T Consensus 930 ~~p~IgdVRG~GLm~GiElV~d~~tk~P----a~~~~~~v~~~~~e~GvLi~~~G~~---~nVlri~PPL~it~e~~D~~ 1002 (1015)
T PRK06148 930 RFDIIGDVRGLGLFLGIELVTDRKTKAP----ATAIARKVKDGARERGILIGTEGPK---DNVLKMRPPMIFSRADADHL 1002 (1015)
T ss_pred HCCCEEEEECCCCEEEEEECCCCCCCCC----CHHHHHHHHHHHHHCCEEEECCCCC---CCEEEECCCCCCCHHHHHHH
T ss_conf 0896887612770899996358777896----3999999999999789189327899---88799808964559999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780153|r 372 CDWLRWVFYFQ 382 (391)
Q Consensus 372 ~~aLe~~~~~~ 382 (391)
+++||.+|++.
T Consensus 1003 l~~Ld~vl~a~ 1013 (1015)
T PRK06148 1003 LEVLDDSFAAA 1013 (1015)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999997
No 99
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=99.25 E-value=5.6e-09 Score=76.46 Aligned_cols=311 Identities=14% Similarity=0.123 Sum_probs=178.8
Q ss_pred CHHHHHHHHHHHCCCC---------CCCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf 9689999863210365---------32898-8999999999999999688998579997487348999875320578970
Q gi|254780153|r 24 RPGWSLGILEGALLGR---------SHRCV-LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~---------sHRs~-~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~ 93 (391)
.|. |++++...+-++ ++.+. ...++-.-+.++.+++|+..- +=+-+-||+.++.++.+.|++|||.
T Consensus 33 S~~-v~~a~gS~ltnkYaEG~pg~Ryy~G~e~iD~iE~la~~rak~lF~a~~---anVqp~SGs~An~av~~all~PGD~ 108 (380)
T pfam00464 33 SRA-VMEALGSVLTNKYAEGYPGKRYYGGCEYVDEVETLAQDRAKELFGLDG---VNVQPLSGSQANLAVYTALLNPGDR 108 (380)
T ss_pred CHH-HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHHCCCCE
T ss_conf 999-999855731264658799843346763599999999999999839976---3517787699999999998379998
Q ss_pred EEEEE----CCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECCC
Q ss_conf 79970----73688888765323876306740-57776578676785-----565799742024202203--20350256
Q gi|254780153|r 94 DVLAW----ESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPES 161 (391)
Q Consensus 94 ~~~~~----g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~~ 161 (391)
++... |+.+......+.-.. .+...+. .+.....|.+++.. .+.+.++-. ++.--..| ....++.+
T Consensus 109 il~l~l~~GGHltHg~~~~~~g~~-~~~~~Y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~-Say~r~~d~~~~reIad~ 186 (380)
T pfam00464 109 IMGLDLPHGGHLTHGYPVNFSGKF-FESMPYGVDPDTGLIDYDQLEKNAKLFKPKLIVAGT-SAYSRLIDYARFREIADE 186 (380)
T ss_pred EEECCCCCCCCCCCCCCCCEECCE-EEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCHHHHHHHHHH
T ss_conf 995367777545679865620114-677874346454866899999999970998899874-004364488999999975
Q ss_pred CCCEEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 86148864011011-----0254556857999700120017665154456778887654114457783123200112321
Q gi|254780153|r 162 REGLVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 162 ~~~llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
.++++++|++--.| ..|=+....|++.++.+|-|-||-| +++..++..-+-.+++...
T Consensus 187 vgA~l~~D~aH~~GLIA~g~~p~Pl~~ADvvt~tTHKTlrGPrG-GiIl~~~~~~e~~~kId~a---------------- 249 (380)
T pfam00464 187 VGAYLMVDMAHIAGLVAAGVIPSPFPYAHVVTTTTHKTLRGPRG-GMIFFREILYELEKKINSA---------------- 249 (380)
T ss_pred CCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCCHHHHHHHHCCC----------------
T ss_conf 09889986377777774243799546665785354566789985-1798378379999997140----------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
.+ ..+-..|-.+.|.++..++.+....+ .....++.-++++.+-+.+...+ +.... -...+..+. +.+.+..
T Consensus 250 --vF-Pg~qggp~~h~iAa~Aval~Ea~~~~-f~~Ya~qVv~NAk~La~~L~~~G-~~vv~--ggTd~H~vl-vdl~~~g 321 (380)
T pfam00464 250 --VF-PGLQGGPLNHVIAAKAVALKQALTPE-FKVYQQQVLKNAKALAEALKERG-YKLVS--GGTDNHLVL-VDLRPKG 321 (380)
T ss_pred --CC-CCCCCCHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHCC-CEECC--CCCCCCEEE-EECCCCC
T ss_conf --48-87667700657999999999984852-99999999999999999999788-83577--999876899-9776669
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC----C--CCCCEEEEECCC----CCCHHHHHHHHHHH
Q ss_conf 01137345678889999988862828726655----6--767505686158----88999999999999
Q gi|254780153|r 317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSY----R--DAPLGLRVWVGV----TVEKEDLLLLCDWL 375 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----r--~~~~~~RIg~~g----~i~~~dv~~L~~aL 375 (391)
+. -+.....|.+.|+.+.-+.- + ..+.|+|||+-- -..++|+..+.+.|
T Consensus 322 ~~----------G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGt~~~T~rG~~e~em~~ia~~I 380 (380)
T pfam00464 322 LD----------GKRAEKALERANITANKNTIPGDPKSPFVTSGLRLGTPALTSRGFGEADFEEVAGYI 380 (380)
T ss_pred CC----------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHC
T ss_conf 99----------999999999769287888598999999888842657778983899889999999659
No 100
>PRK06105 aminotransferase; Provisional
Probab=99.25 E-value=3.9e-08 Score=71.08 Aligned_cols=334 Identities=8% Similarity=0.004 Sum_probs=172.3
Q ss_pred CHHHHHHHHHHHCC--CCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CC-CCCC-
Q ss_conf 96899998632103--653289889-9999999999999968899857999748734899987532------05-7897-
Q gi|254780153|r 24 RPGWSLGILEGALL--GRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LL-GYRG- 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l--~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~-~~~~- 92 (391)
+|+ |.+++.+++= ...|...-+ .+...+.-+.|.++...+ ..+|+| ..|||.++|+++.= .. .++.
T Consensus 66 hp~-i~~Ai~~Q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~-l~~v~f-~~sGSEAvE~AlKlA~~y~~a~g~~~r~ 142 (460)
T PRK06105 66 EQR-LVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVP-MSKVFF-TNSGSEANDTVVKLIWYYNNALGRPEKK 142 (460)
T ss_pred CHH-HHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCC-CCEEEE-ECCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999-9999999996578601258767889999999999737888-487998-3770889999999999999963898863
Q ss_pred EEEEEECCHHHHHHHHHHHCCC-----------CCEEEEECCC-------CCCCC------HHHCC------CCCCEEEE
Q ss_conf 0799707368888876532387-----------6306740577-------76578------67678------55657997
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSL-----------QDVREFTAPY-------GSLPD------FSKVD------FDRDVVFV 142 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~~~~-------g~~~~------~~~~~------~~~~v~~~ 142 (391)
.++...++|=++...-..--+. ..+.....|+ ++... .++++ ....++.+
T Consensus 143 ~iis~~~syHG~T~ga~s~tg~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAav 222 (460)
T PRK06105 143 KIISRKRGYHGVTIASASLTGLPNNHRSFDLPIDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAF 222 (460)
T ss_pred EEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 69972376366504455420895335566899888044678843466888878899999999999999985198856799
Q ss_pred EEECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEEC
Q ss_conf 4202420---22032------035025686148864011011025---4--5568579997001200176-651544567
Q gi|254780153|r 143 WNGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILS 207 (391)
Q Consensus 143 h~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s 207 (391)
-.|...| +..+. ...+|+++++++|+|=|.+=.++- + +..++.-.+....|+|++= .-++.++.+
T Consensus 223 IvEPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKglggG~~Pl~av~~~ 302 (460)
T PRK06105 223 IGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVLSKQLTSSYQPLSAVLIN 302 (460)
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCEEEEEEC
T ss_conf 83672488887269868989999999856977993354117873337612205873787456611235787750488423
Q ss_pred HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r 208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI 287 (391)
Q Consensus 208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i 287 (391)
++..+..... ...... ...++|+..-|+. ..+..++|+.+++++ ..++.+++.+.+.+.+
T Consensus 303 ~~i~~~~~~~---~~~~~~------------~~hg~T~~gnpla-~Aaala~L~~i~~~~----l~~~~~~~g~~l~~~L 362 (460)
T PRK06105 303 ERVYDPIADE---SGKIGT------------FGHGFTASGHPVA-AAVALENLAIIEERD----LVGNAAELGARFQDRL 362 (460)
T ss_pred HHHHHHHCCC---CCCCCC------------CCCCCCCCCCHHH-HHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf 8898765036---666666------------5325689999899-999999999998648----9999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 74797167668820036531789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r 288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED 367 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d 367 (391)
+...- .+++.+-.-+..+...-.+.++..... .+........+...+.++|+++.. .|+.+|+.--=.++.++
T Consensus 363 ~~l~~-~p~i~~VRG~Gl~~gielv~~~~~~~~-~~~~~~~~~~v~~~~~~~Gll~~~-----~gn~i~i~PPL~it~~e 435 (460)
T PRK06105 363 RALAD-HPLVGEVRGVGLIAAVELVADKATKTP-FDPPGAVGARANARAHEHGVISRA-----MGDTLAFCPPLIITAAQ 435 (460)
T ss_pred HHHHC-CCCEEEEECCCEEEEEEEECCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHH
T ss_conf 98626-997688851673999998516544556-772079999999999978968930-----69989997992488999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999877
Q gi|254780153|r 368 LLLLCDWLRWVFYFQKISFL 387 (391)
Q Consensus 368 v~~L~~aLe~~~~~~k~~~~ 387 (391)
++.+++.|+.++.+.-+.+.
T Consensus 436 id~~~~~l~~aL~e~~a~~~ 455 (460)
T PRK06105 436 VDEMVDRFGRALDDTAAWLA 455 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999
No 101
>PRK06460 hypothetical protein; Provisional
Probab=99.25 E-value=8.3e-09 Score=75.37 Aligned_cols=282 Identities=17% Similarity=0.140 Sum_probs=162.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++. |..+-+... + ++.+||-+|+.+++++++++|+.+++...-||. ++++......+.++...
T Consensus 43 gnPT~~~le~~---la~LEg~~~---a-~~~~SGmaAi~~~l~~~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gv~v~~~ 115 (375)
T PRK06460 43 VNPTVLKLAEK---IAELEEAEM---G-VAFSSGMGAISTTLLTLLKPGSSVLIHRDMFGRSYRFFTDFLRNWGVKVEVA 115 (375)
T ss_pred CCHHHHHHHHH---HHHHHCCCE---E-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 88779999999---999819980---8-9953599999999999728999899717875867999999987378677973
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--5657997420242022032---0--3502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+. . +.+.++. .....+++.||.+--.... . ..+++++++++|||-+ +-+...|++. ++|+++-|.
T Consensus 116 d~--~---~~~~~~~~~~~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~gi~~vVDNT~atP~~~~Pl~~-GaDivvhS~ 189 (375)
T PRK06460 116 RP--G---EENILEKIKNKRYDVVFVETISNPLLRVIDIPELSKACKENGALLIVDSTFATPINQKPLVQ-GADIVIHSA 189 (375)
T ss_pred CC--C---CHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf 89--9---99999973476760899988999876405858999999874993897567414122881451-798899955
Q ss_pred HHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 120017665--154456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-++|-.. .|+++.+++.++++.... ...|. +++-+..|.+ ++ .-..+
T Consensus 190 TKyi~GhsD~l~Gvv~~~~~~~~~l~~~~--------------------~~~G~---~lsP~~a~l~---~r---Gl~TL 240 (375)
T PRK06460 190 SKFIAGHNDVIAGLAAGSYELMKKIDLMR--------------------RTLGT---SLDPHAAYLT---IR---GIKTL 240 (375)
T ss_pred CCCCCCCCCEEEEEECCCHHHHHHHHHHH--------------------HHCCC---CCCHHHHHHH---HC---CCCCH
T ss_conf 64346788734034248199999999998--------------------64278---7881668888---63---69989
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676688200--------------365317898247310113734567888999998
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
.-|.+|+.+++..+-+|+++++..... ..|.. -....+.|.+... .+... .+...
T Consensus 241 ~lR~~~~~~nA~~lA~~L~~hp~V~~V-~yPgl~s~p~h~lakk~~~g~ggl~sf~l~~~------~~~~~----~f~~~ 309 (375)
T PRK06460 241 KIRMDVINSNAQKIAEFLQEHPKVSKV-YYPGLKSHPDYGIARRVLKGYGGVVSFEIKGS------QNDAL----KLMKR 309 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCCEEEEEECCC------HHHHH----HHHHH
T ss_conf 999999999999999999748981779-89899999479999985699974269997089------99999----99982
Q ss_pred HHHCCEEECCCCCCC------------C----------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 886282872665567------------6----------75-0568615888999999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRD------------A----------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 336 l~~~g~~~~~~~~r~------------~----------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
|.--..++.+|+.++ . .. -+|+++|= ||.+.|++-|+.|+.+
T Consensus 310 L~lf~~a~SlGg~eSLi~~p~~~sh~~~~~e~~~~~Gi~~~liRlSvGl----Ed~eDLi~DL~~AL~~ 374 (375)
T PRK06460 310 LSVILPAQTLGGVNSTISHPATMSHRTLTPEERKILGITDSMLRLSVGI----EDVEDLIEDLDRALSN 374 (375)
T ss_pred CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf 8826343167876301127542455318999999659793969999421----9999999999999833
No 102
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.24 E-value=1.9e-08 Score=73.07 Aligned_cols=281 Identities=18% Similarity=0.147 Sum_probs=160.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+-+. +-.+..+||-.|+.+++++++++|+.++....-||.- +........+.++...
T Consensus 51 gNPT~~~lE~~l---a~LEg~----~~a~~~sSGmaAi~~~l~~ll~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~v~~~ 123 (370)
T PRK07582 51 SNPTWRQLESAL---GELEGG----AAALVFGSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREA 123 (370)
T ss_pred CCHHHHHHHHHH---HHHCCC----CEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf 986899999999---997199----7189864879999999999708999899778877799999998875068168953
Q ss_pred ECCCCCCCCHHHCCCCCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCHH
Q ss_conf 057776578676785565799742024202203---203--502568614886401--1011025455685799970012
Q gi|254780153|r 121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQK 193 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQK 193 (391)
+.... .+... ...-+++.||.+--... +.+ .+++++++++|||-+ |-+...|+++ ++|+++-|.-|
T Consensus 124 --~~~d~--~~~~~--~~tklv~~EspsNP~l~v~Di~~ia~~A~~~gi~~vVDNT~atP~~~~Pl~~-GADivvhS~TK 196 (370)
T PRK07582 124 --PTAGM--AEAAA--GAADLVLAETPSNPGLDVVDLARLARACHAAGALLVVDNTTATPLGQRPLEL-GADLVVASDTK 196 (370)
T ss_pred --CCHHH--HHHHC--CCCCEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCHHHCCCHHC-CCCEEEEEECE
T ss_conf --85517--87722--5773899977999886533538889999876996999889840642480021-89869885043
Q ss_pred CCCCCCCC--EEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 00176651--5445677-88876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r 194 VLGGEAGF--GIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS 270 (391)
Q Consensus 194 ~l~~ppGl--~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~ 270 (391)
-++|-..+ |.|+.++ +..++... +. ...| .+++-+..|.+...| ..+.
T Consensus 197 Yl~Ghsd~lgG~v~~~~~~~~~~~~~------------~~--------~~~G---~~~sP~~a~lllrGl------~TL~ 247 (370)
T PRK07582 197 ALSGHSDLLAGYVAGRDPELMAAVER------------WR--------LLAG---AIPGPFEAWLAHRSL------ATLG 247 (370)
T ss_pred EECCCCCCCCEEEECCCHHHHHHHHH------------HH--------HHCC---CCCCHHHHHHHHHHC------CCHH
T ss_conf 52478874032872588889999999------------99--------8528---878878899998610------8688
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999997799999998747971676688200--------------3653178982473101137345678889999988
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
-|.+||.+++..+-+|+++++..... ..|.- ..-.++.|.+.+. +. ...+...|
T Consensus 248 lRm~r~~~nA~~lA~~L~~hp~V~~V-~yPgL~s~p~h~la~k~~~g~Gg~~sf~l~~~-------~~----~~~f~~~l 315 (370)
T PRK07582 248 LRFERQCQNALAVAELLREHPAVRGL-RYPGLPEDPAHAVARAQMRRFGGLVSFELADA-------EA----VEAFVDRS 315 (370)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCCEEEEEECCH-------HH----HHHHHHHC
T ss_conf 99999987899999999709996778-89899998139999986899873899997999-------99----99999817
Q ss_pred HHCCEEECCCCCCC-----------CCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 86282872665567-----------6750-5686158889999999999999999999
Q gi|254780153|r 337 EKEEIAYDIGSYRD-----------APLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 337 ~~~g~~~~~~~~r~-----------~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.--..+..+|+..+ .+.+ +|++++ .||++.|++-|+.||++.
T Consensus 316 ~l~~~a~SlGg~~s~~~~~~~~~~~i~~~liRlSVG----lEd~~DLi~Dl~qAL~~l 369 (370)
T PRK07582 316 RLLVAATSFGGVHTSADRRARWGDAVPPGFVRLSCG----IEDTDDLVADVEQALDAL 369 (370)
T ss_pred CCCEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEEE----CCCHHHHHHHHHHHHHHC
T ss_conf 947245363346678479988039979392999940----099999999999999856
No 103
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.24 E-value=8.8e-09 Score=75.20 Aligned_cols=278 Identities=16% Similarity=0.113 Sum_probs=172.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHC---CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---C
Q ss_conf 688877689689999863210---3653289889999999999999996889985799974873489998753205---7
Q gi|254780153|r 16 FSSGPCAKRPGWSLGILEGAL---LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---G 89 (391)
Q Consensus 16 F~pGP~~~~p~~v~~~~~~~~---l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---~ 89 (391)
++.+|+.+ |.+..+.+...+ ++-.+.+|-...+=+++...+.++++.|+...-.| +.|||.+.-.+++-.- .
T Consensus 67 ~~~~~~~~-~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~-t~GgTean~lal~aar~~~~ 144 (460)
T COG0076 67 AGFCPTRV-PPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTF-TSGGTEANLLALLAARERWR 144 (460)
T ss_pred ECCCCCCC-HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE-ECCHHHHHHHHHHHHHHHHH
T ss_conf 63578886-79999999998734799812383158889999999999957997660679-61707999999999999987
Q ss_pred C--C--------C-EEE-EEECCHHHHHHHHHHHCCCCCEEEEECCC-CCCCCHHHCC----CCCC---EEEEEEECCCC
Q ss_conf 8--9--------7-079-97073688888765323876306740577-7657867678----5565---79974202420
Q gi|254780153|r 90 Y--R--------G-VDV-LAWESFGLGWMSDIRQLSLQDVREFTAPY-GSLPDFSKVD----FDRD---VVFVWNGTTSG 149 (391)
Q Consensus 90 ~--~--------~-~~~-~~~g~~~~r~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~----~~~~---v~~~h~ETstG 149 (391)
+ + . .++ .....|+-. .++++-+.......... ....+.++++ .... +.-+-..|-+|
T Consensus 145 ~~~~~~~~~~~~~P~ii~s~~aH~s~~---Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G 221 (460)
T COG0076 145 KRALAESGKPGGKPNIVCSETAHFSFE---KAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTG 221 (460)
T ss_pred HHHHHCCCCCCCCCEEEECCCCCEEHH---HHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 664420234468874994574312099---99998188523787524750568999999998746476499972688887
Q ss_pred EEECCEEE--ECCCCCCEEEEEECCHHHHCCCC---------CCCCEEEEECCHHCCCCCCCCEEEEECHH-HHHHHHHC
Q ss_conf 22032035--02568614886401101102545---------56857999700120017665154456778-88765411
Q gi|254780153|r 150 VCVPDVGF--IPESREGLVICDATSAVFARHID---------FNKLDVVTFSAQKVLGGEAGFGIIILSPA-SVERLEKY 217 (391)
Q Consensus 150 v~~~~~~~--~~~~~~~llivD~vSs~g~~p~d---------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~-al~~~~~~ 217 (391)
..=|+.++ ++.+++..+-||+.+.-...|+. ...+|-+..+.+|.+..|+|.|.++++++ .+.+....
T Consensus 222 ~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~ 301 (460)
T COG0076 222 SIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIF 301 (460)
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHC
T ss_conf 77889999999997699789873440021102474225351788820899886427788887069999688984677612
Q ss_pred CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 44577831232001123210334786446664488999999998620103189999999977999999987479716766
Q gi|254780153|r 218 VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLA 297 (391)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~ 297 (391)
.. .+.+.+ .........|.+...+.++-..++.+-.+ |..++..++.+.++.+.+.+++.+.++...
T Consensus 302 ~~-~yl~~~-----------~~~~~ti~~sr~~~~~~~~~~~l~~lG~e-Gy~~l~~~~~~~a~~la~~l~~~~~~e~~~ 368 (460)
T COG0076 302 AD-YYLPGG-----------GIPNFTILGSRPGRQALALYANLRRLGRE-GYRKLLDRTLELARYLAEELEKLGDFELVN 368 (460)
T ss_pred CC-CCCCCC-----------CCCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 36-677877-----------86663688505418999999999996788-899999999999999999986478827633
Q ss_pred CCCCCCCCCEEEEEECCC
Q ss_conf 882003653178982473
Q gi|254780153|r 298 VDETTRSNTSICMKIVDS 315 (391)
Q Consensus 298 ~~~~~rS~~~v~~~~~d~ 315 (391)
++ -..+++|+.++.
T Consensus 369 -~p---~l~~V~fr~~~~ 382 (460)
T COG0076 369 -EP---ELPIVAFRLKDD 382 (460)
T ss_pred -CC---CCEEEEEECCCC
T ss_conf -88---650799965764
No 104
>PRK03321 putative aminotransferase; Provisional
Probab=99.24 E-value=5.6e-08 Score=70.12 Aligned_cols=302 Identities=16% Similarity=0.106 Sum_probs=175.4
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf 88868887768-96899998632103653289889999999999999996889985799974873489998753205789
Q gi|254780153|r 13 RPFFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR 91 (391)
Q Consensus 13 ~~~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~ 91 (391)
-..|+.+=.+. +|..|++++...+-+ .+|=|+ .-..+.++.|.+.++++.+ .|++ +.|++.++..++..++++|
T Consensus 24 ~i~ls~Nenp~gp~p~v~~ai~~~~~~-~~~YPd--~~~~~Lr~aiA~~~~v~~~-~I~v-~nGs~e~i~~~~~~~~~~g 98 (352)
T PRK03321 24 AIKLSSNETPFGPLPSVRAAIAEATDG-LNRYPD--NGAVELRAALAEHLGVAPE-HVAV-GCGSVALCQQLVQATAGPG 98 (352)
T ss_pred CEECCCCCCCCCCCHHHHHHHHHHHHH-CCCCCC--CCHHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCC
T ss_conf 378029699999889999999986530-677989--9869999999998787858-7998-7469999999999981797
Q ss_pred CEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE---ECC-CC
Q ss_conf 707997073688888765323876306740577765786767-----855657997420242022032035---025-68
Q gi|254780153|r 92 GVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF---IPE-SR 162 (391)
Q Consensus 92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~ 162 (391)
+.+++.+=+|+.. ..+.+..+..+..+........+++.+ +..+.+.++.=..-||...+..+. +.. ..
T Consensus 99 d~Vl~p~P~f~~Y--~~~~~~~G~~~~~v~l~~~~~~dl~~l~~~i~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~ 176 (352)
T PRK03321 99 DEVVFAWRSFEAY--PILVQVAGATPVQVPLTDDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAALARFVAAVPA 176 (352)
T ss_pred CEEEECCCCHHHH--HHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 9899888853268--99999809879998667555788378998658887589984999973013683758999975547
Q ss_pred CCEEEEEECCH-HHHCC-----CC-CCCC-E-EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 61488640110-11025-----45-5685-7-999700120017665--1544567788876541144577831232001
Q gi|254780153|r 163 EGLVICDATSA-VFARH-----ID-FNKL-D-VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 163 ~~llivD~vSs-~g~~p-----~d-~~~i-D-v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
+.++|+|-.=. |...+ +. ..+. . +++-+.-|.+|. || +|+++.+++.++++.+...
T Consensus 177 ~~~vvvDEaY~~f~~~~~~~~~~~~~~~~~nlivlrSfSK~~gl-aGlRlGy~ia~~~~i~~l~~~~~------------ 243 (352)
T PRK03321 177 DVLVVLDEAYVEYIRDGDVPDGLELVRDHPNVVVLRTFSKAYGL-AGLRVGYAVGHPEVITALRKVAV------------ 243 (352)
T ss_pred CCEEEEHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCC-CCCCCEEEECCHHHHHHHHHHCC------------
T ss_conf 84797224089884277876278875204525540254413378-98853320289999999998458------------
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 12321033478644666448899999999862010318999999997799999998747971676688200365317898
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK 311 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~ 311 (391)
++..+....++...+|+ .+.-+....++..+..+.+++.+.+.+ +..+ -|.++-.+.
T Consensus 244 -------------p~~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~~g-~~v~------ps~anFi~~ 300 (352)
T PRK03321 244 -------------PFSVNSLAQAAAIASLE---AADELLERVDAVVAERDRVSAALRAAG-WTVP------PSQANFVWL 300 (352)
T ss_pred -------------CCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCEEEEE
T ss_conf -------------98855999999999964---929999999999999999999999785-8588------998749999
Q ss_pred -ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf -247310113734567888999998886282872665567675056861588899999999999999
Q gi|254780153|r 312 -IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 312 -~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
+.++ ...+...|.++|+++.- +. +.++||+.+ ++++.++|++||+.
T Consensus 301 ~~~~~-------------~~~~~~~L~~~GIlVR~--~~--~~~~RIsvg---t~een~~ll~Alk~ 347 (352)
T PRK03321 301 PLGER-------------TADFAAAAAEAGVVVRP--FG--GEGVRVTVG---APEENDAFLRAARA 347 (352)
T ss_pred ECCCC-------------HHHHHHHHHHCCEEEEE--CC--CCEEEEEEC---CHHHHHHHHHHHHH
T ss_conf 51899-------------99999999819939986--69--991899809---99999999999999
No 105
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.24 E-value=4.4e-08 Score=70.74 Aligned_cols=322 Identities=12% Similarity=0.059 Sum_probs=173.2
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHCCC-CCCCCHH---HHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHH
Q ss_conf 886888776-8968999986321036-5328988---999999999999999688998--57999748734899987532
Q gi|254780153|r 14 PFFSSGPCA-KRPGWSLGILEGALLG-RSHRCVL---GKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 14 ~~F~pGP~~-~~p~~v~~~~~~~~l~-~sHRs~~---f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~n 86 (391)
.+|+-|=-. -+|..+++++...+-. ..|.=.+ ..++-+.+-+.+++-++..-+ .+| +.+.|++.++..+++-
T Consensus 38 i~L~iG~Pd~~~P~~v~~a~~~al~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~v-~vt~Ga~~al~~~~~a 116 (394)
T PRK05942 38 IDLGMGNPDGAAPQPVIEAAIAALEDPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEA-LPLLGSKEGLTHLALA 116 (394)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHH
T ss_conf 888598999988899999999998388888989976859999999999999868988988759-9888889999999999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEE--EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf 057897079970736888887653238763067--4057776578676785-----565799742024202203203---
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVRE--FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--- 156 (391)
++++||.+++-.=.|..-. ..+...+ ..+.. .....+...++++++. .+.+.++.=..-||...+...
T Consensus 117 l~~pGD~Vlv~~P~Yp~y~-~~~~~~g-~~~~~v~l~~~~~~~~d~~~l~~~i~~~tk~iil~~P~NPTG~v~~~e~l~~ 194 (394)
T PRK05942 117 YVNPGDVVLVPSPAYPAHF-RGPLIAG-AQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEE 194 (394)
T ss_pred HCCCCCEEEECCCCCHHHH-HHHHHCC-CEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHCCHHHHHH
T ss_conf 5799898997888867689-9999859-9899997058768877999999861126708999389881012201999999
Q ss_pred --EECCCCCCEEEEEECCHH---HH-CCCC------CCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCC
Q ss_conf --502568614886401101---10-2545------568579997001200176651--544567788876541144577
Q gi|254780153|r 157 --FIPESREGLVICDATSAV---FA-RHID------FNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 157 --~~~~~~~~llivD~vSs~---g~-~p~d------~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~ 222 (391)
.+|..++.++|.|-+=+- .+ .|.. ....-+.+.|.-|.++ .||+ |.++.+++.+++.......
T Consensus 195 i~~~a~~~~i~vIsDEiY~~l~~dg~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~ii~~~~~i~~l~~~~~~-- 271 (394)
T PRK05942 195 IVAFARKYEILLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYN-MAGWRVGFVVGNRDIIQGLRTLKTN-- 271 (394)
T ss_pred HHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHCCCCCCCCEEECCCCCCCC-CCCCCEEEEECCHHHHHHHHHHHHH--
T ss_conf 9998851786797037410025568766557655465344216603334567-8774259986799999999999985--
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
....+ +...-++...+|++-. .-++.+.++++++.+.+.+.+...+ +.... +.
T Consensus 272 --------------------~~~~~-~~~~q~aa~~al~~~~--~~~~~~~~~~~~rrd~l~~~L~~~g-~~~~~--p~- 324 (394)
T PRK05942 272 --------------------LDYGI-FSALQKAAETALQLPD--SYLQQVQERYRQRRDFLIQGLGELG-WDIPP--TK- 324 (394)
T ss_pred --------------------CCCCC-CHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CC-
T ss_conf --------------------34576-7699999999985847--7899999999999999999898769-67537--88-
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 365317898247310113734567888999998886282872665-5676750-56861588899999999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
+..-+-+.++. . .+ ...+ ...++.+.|+++--|. +...+.+ ||++.- .+.+.++.-++-|+.|+.
T Consensus 325 -g~~y~w~~~~~-~---~~---~~~f---~~~ll~~~gV~v~PG~~Fg~~g~~~iRlsf~--~~~~~l~ea~~Rl~~a~~ 391 (394)
T PRK05942 325 -ATMYLWVPCPV-G---MG---STDF---ALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALHRIKQAGI 391 (394)
T ss_pred -EEEEEEEECCC-C---CC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf -58899886899-9---79---8999---9999984999998873117899987999971--889999999999999998
Q ss_pred H
Q ss_conf 9
Q gi|254780153|r 381 F 381 (391)
Q Consensus 381 ~ 381 (391)
+
T Consensus 392 r 392 (394)
T PRK05942 392 R 392 (394)
T ss_pred H
T ss_conf 5
No 106
>PRK06375 consensus
Probab=99.24 E-value=3.9e-08 Score=71.12 Aligned_cols=311 Identities=10% Similarity=0.038 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf 68999986321036-532898--899999999999999968899857999748734899987532057897079970736
Q gi|254780153|r 25 PGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF 101 (391)
Q Consensus 25 p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~ 101 (391)
|..|++++.+.+.. ..|=++ =..++-+.+.+.+++-++..-+-+-+++++ |+.++..++..++.+||.+++-+=.|
T Consensus 44 P~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~i~vt~-~~~~l~~~~~~l~~pGD~Vii~~P~Y 122 (381)
T PRK06375 44 PDNIIKYAFEMAKSGKTHYTPSAGIPELREKIALKLKSRNNIDAVAKNVLVTP-TKFGINLAMMVILNPGDEVLIPSPYY 122 (381)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC-HHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 89999999999737998889999869999999999998559999957699854-89999999998669999899818887
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEEC
Q ss_conf 888887653238763067405777657867678-----55657997420242022032035-----02568614886401
Q gi|254780153|r 102 GLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDAT 171 (391)
Q Consensus 102 ~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~v 171 (391)
..- ...+...+ .....+....+..+++++++ ..+.+.++.=..-||...+..+. +|..++..+|.|-+
T Consensus 123 ~~y-~~~~~~~g-~~~v~~~~~~~~~~d~~~l~~~i~~~tk~i~l~nP~NPTG~v~s~e~l~~i~~la~~~~i~iIsDEi 200 (381)
T PRK06375 123 VSY-PDIVKLAG-GKPVFVDTDDDYNIDIDNMRKAVTPKTRAIIINNPVNPTGKVLSEKEIRELVDFALENNLYIVSDEI 200 (381)
T ss_pred HHH-HHHHHHHC-CEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCC
T ss_conf 619-99999819-9776420388779799999963786774999899979889999999999999988756589981320
Q ss_pred CHH---HHCC---CC---CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC
Q ss_conf 101---1025---45---56857999700120017665--1544567788876541144577831232001123210334
Q gi|254780153|r 172 SAV---FARH---ID---FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240 (391)
Q Consensus 172 Ss~---g~~p---~d---~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
=+- .+.+ .. ..+--+.+.|.-|.++ .|| +|.++..++.+++......
T Consensus 201 Y~~l~~~g~~~~~~~~~~~~~~~I~~~S~SK~~~-~~G~RiG~~i~~~~~i~~~~~~~~--------------------- 258 (381)
T PRK06375 201 YEDLIYRGKLFSPASIPEAFDKTITLNGFSKGYA-MTGWRIGYMVAPEEIVEAANKIQQ--------------------- 258 (381)
T ss_pred HHHHCCCCCCCCHHHHHHHHCCEEEEEHHHHHHH-CCCCCEEEEEECHHHHHHHHHHHH---------------------
T ss_conf 5755169987785340211065799841022433-146555999838999999999997---------------------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 78644666448899999999862010318999999997799999998747971676688200365317898247310113
Q gi|254780153|r 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL 320 (391)
Q Consensus 241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~ 320 (391)
.+....+...-++...+++ ....++.+.+.++++.+.+++.+++..++....++-. .+...+-. ...
T Consensus 259 --~~~~~~~~~~q~aa~~al~---~~~~~~~~~~~~~~rr~~~~~~l~~~~~~~~~~P~G~-------~~~~~~~~-~~~ 325 (381)
T PRK06375 259 --QTITCASSISQYAALRALD---DDESPKHMREEFEKRRDLVVSILKESDNLHVYEPEGA-------FYVFPGYE-SDI 325 (381)
T ss_pred --HCCCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEE-------EEEEEECC-CCC
T ss_conf --5446756299999999962---8277999999999999999999851899779567814-------89956079-998
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 734567888999998886282872665-567675-0568615888999999999999999999
Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
+. .. -...++.+.|+++--|. +...+. -+||+.. .+.+.++.-++-|+.+++.
T Consensus 326 ~~---~~---~~~~ll~~~gV~v~PG~~Fg~~g~~~~Ri~~a--~~~e~l~ea~~RL~~~~~~ 380 (381)
T PRK06375 326 KS---YK---AAENLLENKNVVVTPGSAFGRQGEHHFRISFA--TSEDIIKEGIERIGKFFKS 380 (381)
T ss_pred CH---HH---HHHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 98---99---99999985999997873548899997999981--9999999999999999985
No 107
>PRK07683 aminotransferase A; Validated
Probab=99.24 E-value=7.6e-08 Score=69.26 Aligned_cols=327 Identities=15% Similarity=0.101 Sum_probs=173.1
Q ss_pred CCCCCCCCCCCCC-CHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHH
Q ss_conf 9988868887768-96899998632103----6532898899999999999999968899--857999748734899987
Q gi|254780153|r 11 PKRPFFSSGPCAK-RPGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPE--NYRIAIVPASDTGAVEMA 83 (391)
Q Consensus 11 p~~~~F~pGP~~~-~p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~--~y~v~~l~GsgT~~~ea~ 83 (391)
|+-.+|+-|=-.. +|..+.+++.+.+- ++++ +.-..++-+.+.+.+++-++.+- +.+|++ +.|++.++..+
T Consensus 28 ~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~~~Y~~-~~G~~~lreaia~~~~~~~g~~~~~~~~I~i-t~G~~~al~~~ 105 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAIDENYTSYTH-NAGLLELRKAACNFVKDKYDLHYSPESEIIV-TIGASEAIDIA 105 (387)
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE-ECCHHHHHHHH
T ss_conf 991899999899997899999999998579998899-9887999999999999985899898875999-27829999999
Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE--
Q ss_conf 532057897079970736888887653238763067405777657867678-----5565799742024202203203--
Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG-- 156 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~-- 156 (391)
+..++.+||.+++-.=.|..- ...+...+...+.+...+.|...+.+.++ ..+.+.++.-..-||...+..+
T Consensus 106 ~~~~~~pGD~Vlv~~P~Y~~~-~~~~~~~g~~~v~v~~~~~~~~~d~~~le~~~~~~~k~iil~~P~NPtG~v~s~e~l~ 184 (387)
T PRK07683 106 FRTILEPGTEVILPAPIYPGY-EPIIRLCGATPVFIDTRETGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELK 184 (387)
T ss_pred HHHHCCCCCEEEECCCCCCCH-HHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHH
T ss_conf 999769999899837876656-9999970872353687867887899999973552575786479959897887899999
Q ss_pred ---EECCCCCCEEEEEECCHHHH---CCC---CCC---CCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCC
Q ss_conf ---50256861488640110110---254---556---8579997001200176651--544567788876541144577
Q gi|254780153|r 157 ---FIPESREGLVICDATSAVFA---RHI---DFN---KLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 157 ---~~~~~~~~llivD~vSs~g~---~p~---d~~---~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~ 222 (391)
.+|.+++.++|.|-+=+-.. .+. ... .--+++.|.-|.++ .||+ |.++..++.+++.....
T Consensus 185 ~i~~la~~~~i~ii~DEiY~~l~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~i~~~~~~~~~~~~~~---- 259 (387)
T PRK07683 185 DIANVLKDKNIFVLSDEIYSELVYDQPHTSIAHFPEMREKTIVINGLSKSHS-MTGWRIGFLFAPSYLAKHILKVH---- 259 (387)
T ss_pred HHHHHHHCCCCEEECCCCHHHHHCCCCCCCHHHCCCCCCEEEEEECCCCCCC-CCCCCEEEEECCHHHHHHHHHHH----
T ss_conf 9999761369447546513554069987764334455540367504410136-76522799975999999999999----
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
+ .+...++...-++...++..-.+ -++.+.+.++++.+.+++.+...+ +... .|+
T Consensus 260 -----------~--------~~~~~~~~~~q~aa~~al~~~~~--~~~~~~~~~~~r~~~~~~~L~~~g-~~~~--~P~- 314 (387)
T PRK07683 260 -----------Q--------YNVTCASSISQYAALEALTAGKD--DAKMMRHQYKKRRDYVYNRLISMG-LDVE--KPT- 314 (387)
T ss_pred -----------H--------HCCCCCCHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHCC-CCEE--CCC-
T ss_conf -----------7--------56578868999999999976988--999999999999999999998769-9556--788-
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 365317898247310113734567888999998886282872665-5676750-56861588899999999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
+..-+-..++.... +. ..+ ....+.+.|+++--|. +...+++ +|++.. .+++.++.-++-|+.+++
T Consensus 315 -G~~~~w~~~~~~~~---~~---~~~---~~~ll~~~gV~v~PG~~Fg~~g~g~~Rlsfa--~~~e~l~eal~Rl~~~l~ 382 (387)
T PRK07683 315 -GAFYIFPSIGHFTM---SS---FDF---ALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred -EEEEEEEECCCCCC---CH---HHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf -12799678788899---97---999---9999983999998784228899886999971--999999999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 381 FQ 382 (391)
Q Consensus 381 ~~ 382 (391)
+.
T Consensus 383 ~~ 384 (387)
T PRK07683 383 KK 384 (387)
T ss_pred HH
T ss_conf 87
No 108
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.24 E-value=9.4e-08 Score=68.67 Aligned_cols=296 Identities=14% Similarity=0.041 Sum_probs=171.3
Q ss_pred HHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHHHHH------CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 999986321036---53289889999999999999996------889985799974873489998753205789707997
Q gi|254780153|r 27 WSLGILEGALLG---RSHRCVLGKERINKAIQLTRKVL------EVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 27 ~v~~~~~~~~l~---~sHRs~~f~~i~~~~~~~l~~l~------~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
.+++++...+-. .-||=|+-. ..+.++.|.+++ +++.+ .|++ ..|+...+..++..++++|+.+++.
T Consensus 43 ~~~~ai~~a~~~~~~~~nrYPd~~--~~~Lr~alA~~l~~~~~~gv~~e-~Ii~-gnGSdE~i~~i~~af~~pGd~vl~~ 118 (369)
T PRK03317 43 ALVDDIARAVREAAAGLNRYPDRD--AVALRTDLAAYLTAQTGVGLGVE-NVWA-ANGSNEILQQLLQAFGGPGRSALGF 118 (369)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHCCCCCCCHH-HEEE-CCCHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 999999999997665247289974--89999999987503026797877-8788-2689999999999982899989974
Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CC--CCCEEEEEEECCCCEEECCEEE---ECCCCCCEEEE
Q ss_conf 073688888765323876306740577765786767----85--5657997420242022032035---02568614886
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DF--DRDVVFVWNGTTSGVCVPDVGF---IPESREGLVIC 168 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~--~~~v~~~h~ETstGv~~~~~~~---~~~~~~~lliv 168 (391)
.-.|+.. ...++..+..+.......+...+++.+ .. .+.+.+|.=..-||...+..++ +....+.++|+
T Consensus 119 ~Ptf~~Y--~~~a~~~g~~~v~v~~~~df~~d~d~l~~ai~~~~~klv~l~nPNNPTG~~~~~~~l~~i~~~~~~~~vvv 196 (369)
T PRK03317 119 VPSYSMH--PIIARGTHTEWVAAPRAADFGLDVDAAVAAIREHRPDVVFLTSPNNPTGTALPLDDVEALLDAAPPGIVVV 196 (369)
T ss_pred CCCHHHH--HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEECCHHHHHHHHHHCCCCEEEE
T ss_conf 7860279--99998709779993678788839999999863269858997589998771237899999998588777994
Q ss_pred EECC-HHHHCC----CC-CCCC-EE-EEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC
Q ss_conf 4011-011025----45-5685-79-997001200176651--5445677888765411445778312320011232103
Q gi|254780153|r 169 DATS-AVFARH----ID-FNKL-DV-VTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391)
Q Consensus 169 D~vS-s~g~~p----~d-~~~i-Dv-~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391)
|-.= .|.... ++ ..+. .+ +.-+--|.+| -+|+ |.++.+++.++.+.+.+.
T Consensus 197 DEAY~ef~~~~~~s~~~l~~~~~nlivlRTfSK~~g-LAGlRlGy~ia~~~~i~~l~~~~~------------------- 256 (369)
T PRK03317 197 DEAYAEFSRQGTPSALTLLPGYPRLVVSRTMSKAFA-FAGGRLGYLAAAPAVIDALRLVRL------------------- 256 (369)
T ss_pred CCCHHHHHCCCCCCHHHHHHCCCCEEEEECCHHHHC-CCCHHHEEEECCHHHHHHHHHHCC-------------------
T ss_conf 387798615688766788613797899941058644-665331410069999999998448-------------------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 34786446664488999999998620103189999999977999999987479716766882003653178982473101
Q gi|254780153|r 239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391)
Q Consensus 239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391)
++..+.....+...+|+.- .-+....+...+..+.+++++...+ +..+ -|.+|..+.-.-.
T Consensus 257 ------p~~vn~~a~~aa~aaL~d~---~~~~~~~~~i~~~R~~l~~~L~~lg-~~v~------pS~aNFil~~~~~--- 317 (369)
T PRK03317 257 ------PYHLSAVTQAAARAALRHA---DETLASVAALRAERDRVVAWLRELG-FRVA------PSDANFVLFGRFA--- 317 (369)
T ss_pred ------CCCCCHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEEECCC---
T ss_conf ------9886799999999997499---9999999999999999999999783-9788------8988779996379---
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 1373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
+ ...+...|.++|+++.--+ .+..+||+++ ++++.++|+++|+.+++..
T Consensus 318 --~-------~~~~~~~L~~~gIlVR~~g---~~~~lRisig---t~een~~~l~al~~il~~~ 366 (369)
T PRK03317 318 --D-------AHAVWQRLLDRGVLIRDVG---IPGWLRVTIG---TPEENDAFLDALAEVLATE 366 (369)
T ss_pred --C-------HHHHHHHHHHCCCEECCCC---CCCCEEEECC---CHHHHHHHHHHHHHHHHCC
T ss_conf --9-------9999999996896892289---9893799619---9999999999999997227
No 109
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.24 E-value=1.4e-08 Score=73.96 Aligned_cols=284 Identities=13% Similarity=0.096 Sum_probs=163.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+-+... .++.+||-+|+.+++++++++|+.+++...-||.- +.+...+..+.+++.+
T Consensus 63 ~nPT~~~lE~~l---a~LEg~~~----a~~~sSGmaAi~~~ll~ll~~Gd~vv~~~~~Yg~T~~~~~~~l~~~Gi~v~f~ 135 (394)
T PRK07050 63 ATPTSLALAQRL---AEIEGGRH----ALLQPSGLAAISNVYFGLVKAGDDVLIPDNVYGPNRDFGEWLAKDFGITVRFY 135 (394)
T ss_pred CCHHHHHHHHHH---HHHHCCCE----EEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 886599999999---99829974----99965789999999999607998578356663338999998753188799997
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CE--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--565799742024202203---20--3502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DV--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.+.++. .+...+++.||.+--.+. +. ..+++.+++++|||-+ +-+...|++ .+.|+++-|.
T Consensus 136 d~~-----d~~~~~~~i~~~Tkli~~Esp~NP~l~v~Di~~ia~~A~~~g~~~vVDNT~atP~~~~Pl~-~GaDiVihS~ 209 (394)
T PRK07050 136 DPM-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTWSAGLAFKPFE-HGVDISVQAL 209 (394)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-CCCCEEEEEC
T ss_conf 999-----9899984368664499984489876254372999999987598699857866865006310-4698999506
Q ss_pred HHCCCCCCCC--EEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 1200176651--544567788-8765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG 268 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG 268 (391)
-|-++|-..+ |.|+.+++. .++.... . ...|. +++-+.-|.+...| ..
T Consensus 210 TKyi~GHsDvl~G~vv~~~~~~~~~l~~~------------~--------~~~G~---~~sp~~a~l~~rGL------~T 260 (394)
T PRK07050 210 TKYQSGGSDVLMGATITADAELHAKLKLA------------R--------MRLGI---GVSADDCSLVLRGL------PS 260 (394)
T ss_pred CEEECCCCCCCCCCEECCCHHHHHHHHHH------------H--------HHCCC---CCCHHHHHHHHCCC------CC
T ss_conf 63443788876773656999999999999------------9--------86267---78989999997489------84
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------------CC-CCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 899999999779999999874797167668820-------------03-6531789824731011373456788899999
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQENDWIENLAVDET-------------TR-SNTSICMKIVDSDIASLDINSQKSFCKSMLS 334 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~-------------~r-S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 334 (391)
+.-|.+||.+++..+-+|++.++..... ..|. .. ......|.+.... .......+..
T Consensus 261 L~lRm~r~~~nA~~lA~~L~~hp~V~~V-~yPgL~s~p~h~~a~~~~~g~gg~~s~~~~~~~--------~~~~~~~f~~ 331 (394)
T PRK07050 261 MQVRFDAHSRSALELAQWLKARPEIATV-LHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--------DAAQVDAFVE 331 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEE-ECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC--------CHHHHHHHHH
T ss_conf 7888999999999999998618981089-899988981599999757999628999975667--------9999999998
Q ss_pred HHHHCCEEECCCCCCCC-----------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88862828726655676-----------------750568615888999999999999999999
Q gi|254780153|r 335 FLEKEEIAYDIGSYRDA-----------------PLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 335 ~l~~~g~~~~~~~~r~~-----------------~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.|.--..+..+|+..+. +.-+|++++= ||++.|++=|+.|++.
T Consensus 332 ~l~l~~~a~SlGg~eSL~~p~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~DL~qAL~a 391 (394)
T PRK07050 332 ALELFAIGWSWGGACSLAMPYDVASMRTGKWPHRGTLVRFYIGL----EDEADLRADLEQALQA 391 (394)
T ss_pred HCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC----CCHHHHHHHHHHHHHH
T ss_conf 38826550264576647458976555620027899869999411----9999999999999997
No 110
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.23 E-value=3.7e-08 Score=71.25 Aligned_cols=323 Identities=14% Similarity=0.105 Sum_probs=177.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC----CCC-CEEEEE
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205----789-707997
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL----GYR-GVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~----~~~-~~~~~~ 97 (391)
+|+ +.++++.++-...|-+..|. ..-.+.-+.|.++. |.+..-+|+..||+.++|+++.=.. ..| ...+..
T Consensus 109 ~P~-I~eAv~~Ql~~~~~~s~~~~~p~~~~LAe~L~~~~--P~~l~~vFF~nSGSEAvE~AiKlAr~y~~~~Gr~~IIs~ 185 (468)
T PRK11522 109 NPV-VVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALT--PGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAT 185 (468)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 989-99999999853575127727669999999999748--888897973797289999999999997774099189997
Q ss_pred ECCHHHHHHHHHHHCCCCC---------EEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCC---EEECC------
Q ss_conf 0736888887653238763---------06740577765786767-----8556579974202420---22032------
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQD---------VREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSG---VCVPD------ 154 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstG---v~~~~------ 154 (391)
.++|-++-..-..--+... ......|++....++.. .....++.+-.|+..| +..|.
T Consensus 186 ~~sYHG~T~galS~tg~~~~~~~f~pl~p~~~~vp~~d~~~~~~~~~~~~~~~~~vAAvIvEPIqG~gGv~~pp~~yl~~ 265 (468)
T PRK11522 186 SGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPPGYLTA 265 (468)
T ss_pred CCCCCCCCCHHHEECCCHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 17867764222031276210257778999845637899999999999865148968999997776778982699899999
Q ss_pred EEEECCCCCCEEEEEECCHHHHCCCCC-----CCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 035025686148864011011025455-----68579997001200176-651544567788876541144577831232
Q gi|254780153|r 155 VGFIPESREGLVICDATSAVFARHIDF-----NKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 155 ~~~~~~~~~~llivD~vSs~g~~p~d~-----~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
.+.+|+++++++|+|=|.+=.++-=.| .++-=.+...-|+|++= -=++.++.+++..+.... . +
T Consensus 266 lr~lc~~~giLLI~DEVqTGfGRTG~~fa~e~~gV~PDivt~aKgLggG~~Pigav~~~~~i~~~~~~---~-~------ 335 (468)
T PRK11522 266 VRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD---N-P------ 335 (468)
T ss_pred HHHHHHHCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHH---C-C------
T ss_conf 99987538078822641227886578514523678988899615555787750589762999999851---7-7------
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCE
Q ss_conf 0011232103347864466644889999999986201031899999999779999999874797167-668820036531
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETTRSNTS 307 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~rS~~~ 307 (391)
...++|+.--|+ ...+...+|+.++++. ...+.+++.+.+.+.++....-.+ ++.+ .|....
T Consensus 336 ----------~~hg~Tf~GnPl-acAaala~L~ii~~e~----l~~~a~~~G~~L~~~L~~l~~~~p~~i~d--VRG~GL 398 (468)
T PRK11522 336 ----------FLHTTTFGGNPL-ACAAALATINVLLEQN----LPAQAEQKGDMLLDGFRQLAREYPDLVQE--ARGKGM 398 (468)
T ss_pred ----------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE--EEECCE
T ss_conf ----------744667679979-9999999999998645----99999999999999999998768671125--100316
Q ss_pred EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78-98247310113734567888999998886282872665567675056861588899999999999999999999987
Q gi|254780153|r 308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF 386 (391)
Q Consensus 308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~ 386 (391)
.. +.+.++. ....+...+.++|+++...+. -+..+|+.--=.++.++|+.++++|+.++.+++.++
T Consensus 399 m~giel~~~~-----------~~~~v~~~~~~~Gvlv~~~~~--~~~~lr~~PPL~It~eeid~~l~~l~~aL~~l~~~~ 465 (468)
T PRK11522 399 LMAIEFVDNE-----------IGYNFASEMFRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVIKAARKALAAMRVSV 465 (468)
T ss_pred EEEEEECCCC-----------HHHHHHHHHHHCCEEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999957850-----------089999999978919987489--998899959965799999999999999999997550
Q ss_pred HHH
Q ss_conf 751
Q gi|254780153|r 387 LRA 389 (391)
Q Consensus 387 ~~~ 389 (391)
.+|
T Consensus 466 ~~~ 468 (468)
T PRK11522 466 EEA 468 (468)
T ss_pred HCC
T ss_conf 129
No 111
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23 E-value=1.3e-07 Score=67.70 Aligned_cols=312 Identities=14% Similarity=0.092 Sum_probs=163.2
Q ss_pred CHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHC------C-CCC-C
Q ss_conf 9689999863210365328--988999999999999999688998-579997487348999875320------5-789-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHR--CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSL------L-GYR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl------~-~~~-~ 92 (391)
+|+ |.+++.+++=...|- +....+...+.-+.|.+++ |.+ .+|+ +..||+.|+|+++.=. - .++ .
T Consensus 62 ~p~-i~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~-f~~SGsEAvE~AiKlA~~y~~~~g~~~r~ 137 (429)
T PRK06173 62 HPR-LNAAATNQLSKMSHIMFGGFTHEPAVELAQLLLEIL--PPELNKIF-FADSGSVAVEVAMKMALQYQQAKGEVQRT 137 (429)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEE-ECCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 899-999999999757785567757779999999999847--97758799-71865999999999999999972898765
Q ss_pred EEEEEECC-HHHHHHHHHH-----HCCCCC----EEEE-----ECCCCCCCC---HHHC----C-CCCCEEEEEEECC--
Q ss_conf 07997073-6888887653-----238763----0674-----057776578---6767----8-5565799742024--
Q gi|254780153|r 93 VDVLAWES-FGLGWMSDIR-----QLSLQD----VREF-----TAPYGSLPD---FSKV----D-FDRDVVFVWNGTT-- 147 (391)
Q Consensus 93 ~~~~~~g~-~~~r~~~~~~-----~~~~~~----~~~~-----~~~~g~~~~---~~~~----~-~~~~v~~~h~ETs-- 147 (391)
..+...++ .|.-+..... ...... .... ..+.+.... ++.+ + ....++.+-.|..
T Consensus 138 ~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAavi~EPi~q 217 (429)
T PRK06173 138 KFATIRSGYHGDTWHAMSVCDPVTGMHGLFNSSLPVQYFLPQPSVKFGEAWRDEAIEPLQDLLEQHGDEIAALILEPVVQ 217 (429)
T ss_pred EEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf 26750588588757677605764466666678898653468998765654227799999999985588636999986446
Q ss_pred --CCEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCC-CCCEEEEECHHHH
Q ss_conf --2022032------035025686148864011011025---4--55685--79997001200176-6515445677888
Q gi|254780153|r 148 --SGVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGE-AGFGIIILSPASV 211 (391)
Q Consensus 148 --tGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~p-pGl~~v~~s~~al 211 (391)
-|+..+. ...+|+++++++|+|=|.+=.++- + +..++ |++..+ |+|++= .-++.++.+++..
T Consensus 218 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDivt~g--KglggG~~P~~avi~~~~i~ 295 (429)
T PRK06173 218 GAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIG--KALTGGYLTLSATITTEEIA 295 (429)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEC--CCCCCCCCCEEEEEECHHHH
T ss_conf 7898667899999999987512485577301320687366844532368999789855--44568877617898768999
Q ss_pred HHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 76541144577831232001123210334786446664488999999998620103189999999977999999987479
Q gi|254780153|r 212 ERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND 291 (391)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~ 291 (391)
+.... +.. .. ...++|+.--| ....+...+|+.++++. ...+.+++.+.+++.+....
T Consensus 296 ~~~~~----g~~-~~------------f~hg~T~~Gnp-la~Aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~~~ 353 (429)
T PRK06173 296 QTICS----GEA-KC------------FMHGPTFMANP-LACAIAAESIRLLLESP----WQQNIQRIERQLRQELSPAA 353 (429)
T ss_pred HHHCC----CCC-CC------------CCCCCCCCCCH-HHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHC
T ss_conf 64246----876-66------------35278998689-99999999999998646----99999999999999999631
Q ss_pred CCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 716766882003653178-9824731011373456788899999888628287266556767505686158889999999
Q gi|254780153|r 292 WIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLL 370 (391)
Q Consensus 292 ~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~ 370 (391)
-. +.+.+ .|+...+. +.+.+|. ..+.+...+.++|+++.. .++.+|+.--=.++.++|+.
T Consensus 354 ~~-~~v~d--VRG~Gl~~~iel~~~~-----------~~~~l~~~~~~~Gll~~~-----~g~~l~l~PPL~it~~ei~~ 414 (429)
T PRK06173 354 EF-DYVAE--VRVLGAIGVVEMKSPV-----------DMATLQPRFVEHGIWVRP-----FGKLVYLMPPFIISQDELTQ 414 (429)
T ss_pred CC-CCEEE--ECCCCEEEEEEECCCC-----------CHHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHH
T ss_conf 69-96687--4235729999946845-----------699999999969958983-----49989995893689999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 371 LCDWLRWVFYFQ 382 (391)
Q Consensus 371 L~~aLe~~~~~~ 382 (391)
++++|+.++.++
T Consensus 415 ~~~~l~~aL~e~ 426 (429)
T PRK06173 415 LTSGLLRVLTQE 426 (429)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999998
No 112
>PRK08068 transaminase; Reviewed
Probab=99.23 E-value=5.9e-08 Score=69.96 Aligned_cols=318 Identities=14% Similarity=0.128 Sum_probs=172.8
Q ss_pred CCCCCCCC-CCCCCHHHHHHHHHHHCCC-CCCC-CH--HHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHH
Q ss_conf 98886888-7768968999986321036-5328-98--8999999999999999688998--579997487348999875
Q gi|254780153|r 12 KRPFFSSG-PCAKRPGWSLGILEGALLG-RSHR-CV--LGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMAL 84 (391)
Q Consensus 12 ~~~~F~pG-P~~~~p~~v~~~~~~~~l~-~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~ 84 (391)
+=.+|+-| |.--+|..+++++...+.+ .+|+ ++ =..++-+.+-+.+++-++.+-+ .+| +++.|++.++..++
T Consensus 33 ~vi~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~p~~eI-~vt~Ga~~al~~~~ 111 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEV-AILFGGKAGLVELP 111 (389)
T ss_pred CCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHH
T ss_conf 91899998899998999999999997387678889985809999999999999868998988809-98278899999999
Q ss_pred HHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-
Q ss_conf 320578970799707368888876532387630674--057776578676785-----565799742024202203203-
Q gi|254780153|r 85 WSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG- 156 (391)
Q Consensus 85 ~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~- 156 (391)
.-++++||.+++-.=.|-.-+ ..+. ..+..+..+ ..+.+..+++++++. .+.+.++.=..-||...+..+
T Consensus 112 ~al~~pGD~Vlv~~P~Yp~y~-~~~~-~~g~~~~~vpl~~~~~~~~d~e~l~~~i~~~tk~iil~~P~NPTG~v~~~~~l 189 (389)
T PRK08068 112 QCLLNPGDTALVPDPGYPDYL-SGVA-LARAQFETMPLIAENNFLPDYEKIPESVAEKAKLMYLNYPNNPTGAVATKAFF 189 (389)
T ss_pred HHHCCCCCEEEECCCCCCCHH-HHHH-HCCCEEEEEECCCCCCCCCCHHHHHHHCHHCCEEEEECCCCCCCCHHCCHHHH
T ss_conf 996699998998078898649-9999-71875689963666798689999987431046599988997984612059999
Q ss_pred ----EECCCCCCEEEEEECCHH----HHCCCC------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCC
Q ss_conf ----502568614886401101----102545------56857999700120017665--15445677888765411445
Q gi|254780153|r 157 ----FIPESREGLVICDATSAV----FARHID------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPS 220 (391)
Q Consensus 157 ----~~~~~~~~llivD~vSs~----g~~p~d------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~ 220 (391)
.+|..++..+|.|-+=+- +..|.. ....-+.+.|.-|.++ .|| +|.++.+++.+++....+..
T Consensus 190 ~~l~~la~~~~i~visDEiY~~l~~~~~~p~s~l~~~~~~~~~I~~~S~SK~~~-~~G~RiG~~v~~~~~i~~l~~~~~~ 268 (389)
T PRK08068 190 EETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIEIYTLSKTFN-MAGWRVAFAVGNESVIEAINLLQDH 268 (389)
T ss_pred HHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCEEEEEECCHHHHHHHHHHCCC
T ss_conf 999998710777999626521114678766411036532013406610356557-8631179997799999999973025
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~ 300 (391)
.+..+++. .-++...+|..- +.=++.+.++++++.+.+++.+++.+ +....++
T Consensus 269 ----------------------~~~~~~~~-~q~aa~~al~~~--~~~~~~~~~~~~~rr~~~~~~l~~~g-~~~~~P~- 321 (389)
T PRK08068 269 ----------------------LFVSLFGA-IQDAAIEALLSD--QSCVQELVARYESRRNAFISACREIG-WEVDAPK- 321 (389)
T ss_pred ----------------------CEECCCHH-HHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC-
T ss_conf ----------------------30047849-999999998688--88999999999999999999999759-7605888-
Q ss_pred CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 003653178982473101137345678889999988-86282872665-5676750-5686158889999999999999
Q gi|254780153|r 301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+..-+-+.+++. .+ ..++...+ .+.|+++--|. +...+.+ +|++. ..++++++.-++-|.
T Consensus 322 ---G~~y~w~~~~~~----~~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~vRl~f--a~~~e~l~ea~~RL~ 384 (389)
T PRK08068 322 ---GSFFAWMPVPKG----YT-------SEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGL--LIDEERLREAINRIA 384 (389)
T ss_pred ---EEEEEEEECCCC----CC-------HHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEE--ECCHHHHHHHHHHHH
T ss_conf ---135997868999----89-------8999999997099999878543789969699998--389999999999997
No 113
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23 E-value=1.1e-07 Score=68.22 Aligned_cols=335 Identities=11% Similarity=0.050 Sum_probs=175.0
Q ss_pred CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCCC-E
Q ss_conf 96899998632103653289--88999999999999999688998579997487348999875320------5-7897-0
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYRG-V 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~~-~ 93 (391)
+|+ |.+++.+++-..+|-. .--.+...+.-++|.++ +|.+..-+|+..||+.|+|+++.=- - .++. .
T Consensus 65 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~elAe~L~~~--~P~~l~~v~f~~SGSEAvE~AiKlAr~y~~~~g~~gr~~ 141 (467)
T PRK07030 65 NPR-INQRIKDQVDQLEHVILAGFSHQPVIELSERLVKI--TPAGLDRVFYADNGSSAIEVALKMSFHYWRNRGKPRKKR 141 (467)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH--CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 699-99999999975777245776877999999999973--888868799837848999999999999999808988707
Q ss_pred EEEEECCHHHHHHHHHHHCCC-----------CCEEEEECCC------CCCCC------HHHC-----CCCCCEEEEEEE
Q ss_conf 799707368888876532387-----------6306740577------76578------6767-----855657997420
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSL-----------QDVREFTAPY------GSLPD------FSKV-----DFDRDVVFVWNG 145 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~~~~------g~~~~------~~~~-----~~~~~v~~~h~E 145 (391)
++...++|=++...-..--+. .++.....|. +...+ ++.+ +....++.+-.|
T Consensus 142 iis~~~sYHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~~g~~~~~~~~~~~~~le~~l~~~~~~iAAvi~E 221 (467)
T PRK07030 142 FVTLTNSYHGETIAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRNMFAHMEQTLAEHHDEIAAVIVE 221 (467)
T ss_pred EEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 98733734342177776348701147877878886675898643566788889999999999999998479974699982
Q ss_pred C-C--C-CEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCC-CCCEEEEEC
Q ss_conf 2-4--2-022032------035025686148864011011025---4--55685--79997001200176-651544567
Q gi|254780153|r 146 T-T--S-GVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGE-AGFGIIILS 207 (391)
Q Consensus 146 T-s--t-Gv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~p-pGl~~v~~s 207 (391)
. . . |+..|. ...+|+.+++|+|+|=|.+=.++- + +.+++ |++ ..-|+|++= -=++.++.|
T Consensus 222 Piiqg~GG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDii--t~aKgl~gG~~Pl~av~~~ 299 (467)
T PRK07030 222 PLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL--CLSKALTGGYLPLAAVLTT 299 (467)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCCCCCCCCCCEE--EEECCCCCCCCCEEEEEEC
T ss_conf 32336799727998999999999975594687250031786245853200567899889--9704311687753899874
Q ss_pred HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r 208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI 287 (391)
Q Consensus 208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i 287 (391)
++..+....-... +. ....++|+.--|+ ...+..++|+.+++++ ..++.++..+.+.+.+
T Consensus 300 ~~I~~~~~~~~~~--------~~-------~~~Hg~Ty~GnPl-acAAala~L~ii~~e~----l~~~~~~~g~~l~~~l 359 (467)
T PRK07030 300 DTVYQAFYDDYPT--------LR-------AFLHSHSYTGNPL-ACAAALATLDIFEQDN----VIEANRALARRMAEAT 359 (467)
T ss_pred HHHHHHHHCCCCC--------CC-------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf 8999876325655--------55-------7675889997999-9999999999999768----9999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 74797167668820036531789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r 288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED 367 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d 367 (391)
+++.. .+.+.+-..+..+.-.=.+.|+.... ...........+...+.++|+++.. .+..+|+.--=.++.++
T Consensus 360 ~~l~~-~p~VgdVRG~GL~~giElv~d~~t~~-p~~~~~~~~~~v~~~~~~~G~l~~~-----~gnvi~~~PPL~it~~e 432 (467)
T PRK07030 360 AHLAD-HPHVAEVRQTGMALAIEMVQDKASKT-PYPWQERRGLKVYQHALERGALLRP-----LGSVVYFLPPYVITPEQ 432 (467)
T ss_pred HHHHC-CCCEEEEECCCCEEEEEEECCCCCCC-CCCHHHHHHHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHH
T ss_conf 98707-99758883475199999703787678-8854667999999999978988973-----49999997992789999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHC
Q ss_conf 999999999999999-99877511
Q gi|254780153|r 368 LLLLCDWLRWVFYFQ-KISFLRAI 390 (391)
Q Consensus 368 v~~L~~aLe~~~~~~-k~~~~~~~ 390 (391)
++.+++.|+.++.++ |.++.-|+
T Consensus 433 id~~~~~l~~al~~a~~e~v~~~~ 456 (467)
T PRK07030 433 IDFLAEVASEGIDIATRDSVSVAV 456 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999986777765
No 114
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.23 E-value=4.2e-08 Score=70.89 Aligned_cols=317 Identities=16% Similarity=0.067 Sum_probs=159.3
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--------CCCCEEE
Q ss_conf 96899998632103653289889999999999999996889985799974873489998753205--------7897079
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--------GYRGVDV 95 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--------~~~~~~~ 95 (391)
+|+ |.+++.+++-...|-+..|.. +...+...++...+-..+|+| ..||+.++|+++.=.. ..+..++
T Consensus 57 ~p~-v~~Ai~~q~~~l~~~~~~~~~--~~~~~la~~L~~~~~~~~v~f-~~SGsEAve~AiKlAr~~~~~~~~~~r~~Ii 132 (406)
T PRK12381 57 HPA-LREALNEQASKFWHTGNGYTN--EPVLRLAKKLIDATFADRVFF-CNSGAEANEAALKLARKYAHDRYGNHKSGIV 132 (406)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHHHHCCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 899-999999998655667787368--899999999873058764999-4877789999999999999863899987699
Q ss_pred EEECCHHHHHHHHHHHCCCCCEEEEECC--CC----CCCCHHHCCC--CCCEEEEEEECCCC---EEECC------EEEE
Q ss_conf 9707368888876532387630674057--77----6578676785--56579974202420---22032------0350
Q gi|254780153|r 96 LAWESFGLGWMSDIRQLSLQDVREFTAP--YG----SLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD------VGFI 158 (391)
Q Consensus 96 ~~~g~~~~r~~~~~~~~~~~~~~~~~~~--~g----~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~------~~~~ 158 (391)
...++|-++...-...-+.........| .+ ...+++.... .+.++.+-.|...| +..+. ...+
T Consensus 133 ~~~~~yHG~t~~~~s~~g~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAvivEPiqg~gG~~~~~~~yl~~lr~l 212 (406)
T PRK12381 133 AFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVEPIQGEGGVIPADKAFLQGLREL 212 (406)
T ss_pred EECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 96787678832232157873335677889974435652229999997388835999906456688326898999999975
Q ss_pred CCCCCCEEEEEECCH-HH--HCCCCC--CCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 256861488640110-11--025455--685--79997001200176651544567788876541144577831232001
Q gi|254780153|r 159 PESREGLVICDATSA-VF--ARHIDF--NKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 159 ~~~~~~llivD~vSs-~g--~~p~d~--~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
|+++++++|+|=|.+ +| +.-+-+ .++ |++ ...|+|++=-=++.++.+++..+...
T Consensus 213 c~~~gillI~DEV~tG~GRtG~~~a~~~~gv~PDiv--~~gK~lggG~P~sav~~~~~i~~~~~---------------- 274 (406)
T PRK12381 213 CDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTEKYASVMT---------------- 274 (406)
T ss_pred EECCCCEEECCCCEECCCCCCCCCCCCCCCCCCCEE--EECCCCCCCCEEEEEEECHHHHHHCC----------------
T ss_conf 211583797444200777666765354667899889--97420248860489987288786528----------------
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf 123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M 310 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~ 310 (391)
....++|+..-|+. ..+..++|+.++++.=+++..++.+...+.+.+..++. +.+. +.|...... +
T Consensus 275 ------~~~h~~T~~gnpla-~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~----~~i~--dVRG~GLm~gi 341 (406)
T PRK12381 275 ------VGTHGTTYGGNPLA-SAVAGKVLDLINTPEMLNGVKQRHDWFVERLNTINARY----GLFS--EIRGLGLLIGC 341 (406)
T ss_pred ------CCCCCCCCCCCHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC----CCEE--EEEECCEEEEE
T ss_conf ------88766389869999-99999999999755699999999999999999988738----9888--63025269999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 82473101137345678889999988862828726655676750568615888999999999999999999999877511
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLRAI 390 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~~~ 390 (391)
.+.++.. ...+.+...+.++|+++...+ ++.+|+.--=.++.++|+.+++.|+.++.+ -+.|++
T Consensus 342 el~~~~~---------~~~~~l~~~~~~~Gll~~~~g----~n~irl~PPL~it~~eid~~l~~l~~al~~---v~~~~~ 405 (406)
T PRK12381 342 VLNAEYA---------GKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNVSEEEIATGLDRFARACER---FVSRGS 405 (406)
T ss_pred EECCCCC---------CHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH---HHHCCC
T ss_conf 9648875---------359999999997996996079----996999799538999999999999999999---996428
Q ss_pred C
Q ss_conf 9
Q gi|254780153|r 391 S 391 (391)
Q Consensus 391 ~ 391 (391)
|
T Consensus 406 ~ 406 (406)
T PRK12381 406 S 406 (406)
T ss_pred C
T ss_conf 9
No 115
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.23 E-value=5.2e-08 Score=70.31 Aligned_cols=325 Identities=14% Similarity=0.124 Sum_probs=164.8
Q ss_pred CHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEE
Q ss_conf 9689999863210365--32898899999999999999968--899857999748734899987532057-89-707997
Q gi|254780153|r 24 RPGWSLGILEGALLGR--SHRCVLGKERINKAIQLTRKVLE--VPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~--sHRs~~f~~i~~~~~~~l~~l~~--~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~ 97 (391)
+|+ |.+++++++=.. .|...-......+..+.|..++- .+.+++++|+..|||.++|+++.-.-. .+ ..++..
T Consensus 81 ~p~-i~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAvE~AiKlAR~~tgr~~Iis~ 159 (464)
T PRK06938 81 HPV-VIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFGSLPEAFAKEAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSF 159 (464)
T ss_pred CHH-HHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 599-9999999986089812678586899999999999620555304408984798089999999998646798859998
Q ss_pred ECCHHHHHHHHHHHCCC-----------CCEEEEECC------CCCCC------CHHHCC----C----CCCEEEEEEEC
Q ss_conf 07368888876532387-----------630674057------77657------867678----5----56579974202
Q gi|254780153|r 98 WESFGLGWMSDIRQLSL-----------QDVREFTAP------YGSLP------DFSKVD----F----DRDVVFVWNGT 146 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~-----------~~~~~~~~~------~g~~~------~~~~~~----~----~~~v~~~h~ET 146 (391)
.++|=++......--+. .++.....| ++... ..+.++ . ...++.+-.|+
T Consensus 160 ~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~p~p~~~r~p~~~~~~~~~~~~~~~le~~i~~~~~g~~~iAAvi~Ep 239 (464)
T PRK06938 160 QGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVQLPAAVILEV 239 (464)
T ss_pred ECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 34788970655654178755556788899967816886446766776156788889999999740540688248999888
Q ss_pred CCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf 420---22032------035025686148864011011025---4--55685--79997001200176651544567788
Q gi|254780153|r 147 TSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPAS 210 (391)
Q Consensus 147 stG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~a 210 (391)
..| +..+. ...+|+++++|+|+|=|.+=.++- + +..++ |++ ..-|+|++-==++.++.+++.
T Consensus 240 Iqg~gGvi~~p~~yl~~lr~lc~~~giLlI~DEVqtGfGRTG~~fa~e~~gv~PDii--t~gKglgGg~Plsavi~~~~i 317 (464)
T PRK06938 240 VQGEGGVIPADDEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV--VLSKAIGGSLPLAVVVYREWL 317 (464)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCEE--EECHHCCCCCCEEEEEECHHH
T ss_conf 568779864998999999999866791598642012677436840643236888879--863000487734999982776
Q ss_pred HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 87654114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r 211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN 290 (391)
Q Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~ 290 (391)
+. ..+ ...++|+.--|+ ...+..++|+.+++++ ..++.+++.+.+.+.+.+.
T Consensus 318 -~~---~~~-------------------g~h~~T~~gnpl-a~AaalavL~iie~e~----l~~~a~~~G~~l~~~L~~l 369 (464)
T PRK06938 318 -DT---WQP-------------------GAHAGTFRGNQM-AMAAGSATLRYIKEHR----LAEHAAAMGERLLEHLRQL 369 (464)
T ss_pred -HH---CCC-------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHH
T ss_conf -50---478-------------------874872899989-9999999999998644----9999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCEEE-EEECCCCCCC-C--CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf 9716766882003653178-9824731011-3--7345678889999988862828726655676750568615888999
Q gi|254780153|r 291 DWIENLAVDETTRSNTSIC-MKIVDSDIAS-L--DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKE 366 (391)
Q Consensus 291 ~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~-~--~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~ 366 (391)
..-.+.+. +.|...... +.+.++.... . ...........+...+.++|+++...+. -++.+|+.--=.++.+
T Consensus 370 ~~~~p~V~--dVRG~GLm~giElv~~~~~~d~~~~~p~~~~~~~~v~~~~l~~Gll~~~~g~--~g~virl~PPL~it~e 445 (464)
T PRK06938 370 QRDYPQLG--DVRGRGLMLGVEIVDPQGEPDALGHPPANGELASRIQRECLRRGLILELGGR--HGSVVRFLPPLIITAE 445 (464)
T ss_pred HHCCCCEE--EEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHH
T ss_conf 85399879--7641606999998416666443335655589999999999978928964688--9998999799128899
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999
Q gi|254780153|r 367 DLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 367 dv~~L~~aLe~~~~~~k 383 (391)
+++.+++.|+.++.++-
T Consensus 446 eid~~~~~l~~al~~a~ 462 (464)
T PRK06938 446 QIDEVAEIFAEAVYAAV 462 (464)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999985
No 116
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.22 E-value=6.9e-08 Score=69.51 Aligned_cols=324 Identities=14% Similarity=0.071 Sum_probs=176.0
Q ss_pred CCCCCCCCCCCC-CCHHHHHHHHHHHCCCC-CCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 998886888776-89689999863210365-32898--899999999999999968899857999748734899987532
Q gi|254780153|r 11 PKRPFFSSGPCA-KRPGWSLGILEGALLGR-SHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 11 p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~-sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n 86 (391)
++-..|+-|=-. -.|..|++++.+.+-.- .|=++ -..++-+.+.+.+++-++..-+.+=++++.|++.++..++..
T Consensus 24 ~dvi~l~vgdpDf~~p~~i~~a~~~~~~~g~~~Y~~~~G~~~lreaia~~~~~~~g~~v~~d~I~it~G~~~al~~~~~~ 103 (382)
T PRK06108 24 EDVLPFWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGATTPPERIAVTSSGVQALMLAAQA 103 (382)
T ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHH
T ss_conf 99178889898999889999999999847998379998869999999999999878898668499807899999999999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE---CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--
Q ss_conf 05789707997073688888765323876306740---57776578676785-----565799742024202203203--
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT---APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-- 156 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-- 156 (391)
++++||.+++.+=.|..- ...+...+ ..+..+. ...+...++++++. .+.+.++.=..-||...+..+
T Consensus 104 ~~~pGD~Vlv~~P~Y~~~-~~~~~~~g-~~~~~vpl~~~~~~~~~d~~~le~~~~~~~k~iil~~P~NPtG~v~s~e~l~ 181 (382)
T PRK06108 104 LVGPGDEVVAVTPAWPNL-VAAPKILG-ARVVCVPLQYGGGGWQLDVDRLLAAITPRTRALFINSPNNPTGWTASRDDQQ 181 (382)
T ss_pred HCCCCCEEEECCCCCCCH-HHHHHHCC-CEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHCCHHHHH
T ss_conf 669999899816878656-99999738-8278534566678866799999964575664999889969966204478899
Q ss_pred ---EECCCCCCEEEEEECCHHH---HC---C--CC---CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCC
Q ss_conf ---5025686148864011011---02---5--45---56857999700120017665--15445677888765411445
Q gi|254780153|r 157 ---FIPESREGLVICDATSAVF---AR---H--ID---FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPS 220 (391)
Q Consensus 157 ---~~~~~~~~llivD~vSs~g---~~---p--~d---~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~ 220 (391)
.+|..++..+|.|-+=+-. .. | ++ ..+--+.+.|.-|.++ -|| +|.++..++..++.....
T Consensus 182 ~l~~la~~~~v~iisDEiY~~l~f~~~~~~ps~~~~~~~~~~~i~~~S~SK~f~-~~G~RiG~ii~~~~~~~~~~~~~-- 258 (382)
T PRK06108 182 AILAHCRRHGLWIVADEVYERLYYGGGGRAPSFLDIAEPDDRIIFVNSFSKNWA-MTGWRLGWLVAPPSLGQDLEKLI-- 258 (382)
T ss_pred HHHHHHHCCCCEEECHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCHHCC-CCCCEEEEEEECHHHHHHHHHHH--
T ss_conf 999987626975353343333013899888346652366764999804303104-76761799997999999999999--
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~ 300 (391)
++ ...++|.+.-++...+++.-. .=++.+.++.+++.+.+.+.+.+.+++....++-
T Consensus 259 -------------~~--------~~~~~~~~~q~aa~~al~~~~--~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~P~g 315 (382)
T PRK06108 259 -------------EY--------NTSCVPQFVQRAAVAALDEGE--DFVAQLVARLRRARDHLVDALRALPGVEVPKPDG 315 (382)
T ss_pred -------------HH--------CCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCE
T ss_conf -------------87--------037776899999999996862--6589999999999999999997379968737882
Q ss_pred CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 0036531789824731011373456788899999-8886282872665-5676750-56861588899999999999999
Q gi|254780153|r 301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
..-+-+++++. . + .. .+.. .+.+.|+++--|. +...+.+ +|++.. .+.+.++.-++-|+.
T Consensus 316 ----~~y~w~~~~~~--~--~---~~----~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~a--~~~~~l~eal~RL~~ 378 (382)
T PRK06108 316 ----AMYAFFRLDGA--T--D---SL----ALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFA--RDPARLDEGVERLRR 378 (382)
T ss_pred ----EEEEEEECCCC--C--C---HH----HHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHH
T ss_conf ----79998879999--9--9---99----999999996999998784118899997999962--999999999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 378 VF 379 (391)
Q Consensus 378 ~~ 379 (391)
++
T Consensus 379 ~l 380 (382)
T PRK06108 379 FL 380 (382)
T ss_pred HH
T ss_conf 96
No 117
>PRK05794 consensus
Probab=99.22 E-value=6.4e-08 Score=69.73 Aligned_cols=319 Identities=12% Similarity=0.012 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 689999863210365328---988999999999999999688998-5799974873489998753205789707997073
Q gi|254780153|r 25 PGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391)
|..+++++.+.+-.-.|+ +.=..++-+.+.+.+++-++.+=+ -+|+ ++.|++.++..++.-++.+||.+++-.=.
T Consensus 45 p~~i~~a~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~g~~v~~~~I~-it~G~~~al~~~~~~l~~pGD~Vlv~~P~ 123 (397)
T PRK05794 45 PENIKEAAIDAIEEGYTKYTPASGILELKQAICDKFKKDNGLNYEPSNII-VSNGAKQSLSNAFEAILNPGDEVIIPVPY 123 (397)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEE-ECCCHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 89999999999855899898997729999999999999858999800189-87885999999999966998989982687
Q ss_pred HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEE
Q ss_conf 68888876532387630674-057776578676785-----565799742024202203203-----5025686148864
Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICD 169 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD 169 (391)
|..- ...+...++..+.+. ....+..+++++++. .+.+.++.=..-||...+..+ .+|.+++.++|.|
T Consensus 124 Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~iil~~P~NPtG~v~s~~~l~~l~~la~~~~i~visD 202 (397)
T PRK05794 124 WVSY-PELVKLADGVPVFVDTKEENDFKYTIEELENAITSKTKAIIINSPNNPTGTVYSKEELEEIAKFAKEHDLFIISD 202 (397)
T ss_pred CCCH-HHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECH
T ss_conf 6434-999997188029965673237777999999753335718997899898782435067999997654103688433
Q ss_pred ECCHH---HHC-CCC-------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 01101---102-545-------56857999700120017665--154456778887654114457783123200112321
Q gi|254780153|r 170 ATSAV---FAR-HID-------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 170 ~vSs~---g~~-p~d-------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
-+=+- ... +.. ..+--+++.|.-|.++ .|| +|.++..++.+++....+
T Consensus 203 EiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~~~~~~------------------ 263 (397)
T PRK05794 203 EIYEKLIYGEEEHISIASLSEDAFKRTVVINGMSKAYA-MTGWRIGYAASSLEIIKVMSNIQ------------------ 263 (397)
T ss_pred HHHHHHHCCCCCCCCHHHHCHHHHCCCEECCCCCCCCC-CCCCEEEEEECCHHHHHHHHHHH------------------
T ss_conf 34577625898887889956143203320267644447-76522587755899999999999------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
..+...++...-++...+++.- +.-++.+.+..+++...+.+.+.+..++....++-. .-+-+.+++..
T Consensus 264 -----~~~~~~~~~~~q~a~~~al~~~--~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~P~g~----~y~~~~~~~~~ 332 (397)
T PRK05794 264 -----SHTTSNPNSIAQYASLEALNGD--QEQIKNMVEEFKKRRDYMVERINSIKGLSCIKPKGA----FYVMVNISKVI 332 (397)
T ss_pred -----HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEE----EEEEEECHHHH
T ss_conf -----8666897699999999998587--999999999999999999999860799676068813----69958783442
Q ss_pred C---CCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0---11373456788899999-88862828726655676750568615888999999999999999999
Q gi|254780153|r 317 I---ASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 317 ~---~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
. ......... ++.. .+.+.|+++--|..=....-+|++.. .+.+.++.-++-|+.++.+
T Consensus 333 ~~~~~~~~~~~~~----~f~~~ll~~~gV~v~PG~~Fg~~~~vRl~f~--~~~e~l~eal~RL~~~l~~ 395 (397)
T PRK05794 333 GKEIKGNTIKGSI----DFANLLLEEENVAVVPGIAFGMDNYIRLSYA--TSMENIEKGLDRIENFLNK 395 (397)
T ss_pred CCCCCCCCCCCHH----HHHHHHHHHCCEEEEECCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 5334688778999----9999999849999981853589983999982--9999999999999999985
No 118
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.22 E-value=1.3e-07 Score=67.72 Aligned_cols=306 Identities=12% Similarity=0.080 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHCCC-CCCCCH---HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 68999986321036-532898---8999999999999999688998-579997487348999875320578970799707
Q gi|254780153|r 25 PGWSLGILEGALLG-RSHRCV---LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391)
Q Consensus 25 p~~v~~~~~~~~l~-~sHRs~---~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391)
|..+++++.+.+-. ..|+=+ -..++-+.+.+.+++-++.+-+ ...++.+.|++.++..++..++++||.+++..=
T Consensus 44 p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~~~p~~~vi~t~Ga~~al~~~~~~l~~pGD~Vli~~P 123 (383)
T TIGR03540 44 PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDP 123 (383)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 99999999999828887654998784999999999999986898996766998478259999999996689898998789
Q ss_pred CHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEE
Q ss_conf 368888876532387630674--057776578676785-----565799742024202203203-----50256861488
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVI 167 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~lli 167 (391)
.|..- ...+...+ ..+..+ ....+..+++++++. .+.+.++.=..-||...+..+ .+|..++.++|
T Consensus 124 ~Y~~y-~~~~~~~g-~~~v~vpl~~~~~~~~d~e~l~~~~~~~~k~iil~~P~NPTG~v~s~~~l~~i~~la~~~~i~iI 201 (383)
T TIGR03540 124 GYPVY-RIGTLFAG-GEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVC 201 (383)
T ss_pred CCCCH-HHHHHHCC-CEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEE
T ss_conf 86016-99999719-85899613357798579999987452377499989998970701210222201001245540576
Q ss_pred EEECCHH---HH-CCC-----C-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 6401101---10-254-----5-56857999700120017665--15445677888765411445778312320011232
Q gi|254780153|r 168 CDATSAV---FA-RHI-----D-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 168 vD~vSs~---g~-~p~-----d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
.|-+=+- .+ .+. + .....+.+.|.-|.++ .|| +|.++..++.+++....+.
T Consensus 202 sDEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~i~~~~l~~~~~~~~~---------------- 264 (383)
T TIGR03540 202 HDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYN-MTGWRIGMAVGNADLIAGLGKVKT---------------- 264 (383)
T ss_pred CCHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCCCC-CCCCEEEEECCCHHHHHHHHHHHH----------------
T ss_conf 110255530389999771113665542577630235447-887348962289999999999975----------------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391)
.....+| ...-++...+++.-. .-++.+.+.++++.+.+.+.+.+.+ +.... |+ +..-+-+.+++.
T Consensus 265 ------~~~~~~~-~~~q~a~~~al~~~~--~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~~--p~--g~~~~w~~~~~~ 330 (383)
T TIGR03540 265 ------NVDSGVF-QAIQYAAIAALNGPQ--DVVKEIRKIYQRRRDLLLEALKKIG-IDVEK--PK--ATFYVWVPVPEG 330 (383)
T ss_pred ------HHCCCCC-HHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEEEC--CC--CEEEEEEECCCC
T ss_conf ------5135676-599999999985919--9999999999999999999998769-87735--78--057998989999
Q ss_pred CCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 10113734567888999998-886282872665-5676750-5686158889999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
.+ ..++... +.+.|+++--|. +...+.+ ||++.. .+.+.++.-++-|+
T Consensus 331 ----~~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~~--~~~e~l~eal~RL~ 381 (383)
T TIGR03540 331 ----YT-------SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIK 381 (383)
T ss_pred ----CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHH
T ss_conf ----89-------89999999983999998885328899886999986--99999999999984
No 119
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.21 E-value=1.9e-08 Score=73.14 Aligned_cols=281 Identities=14% Similarity=0.125 Sum_probs=160.0
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++. |..+=+.. .++ +.+||-+|+.+ ++.++++|+.+++...-|+. +.++......+..+...
T Consensus 48 ~nPt~~~lE~~---la~LEg~~---~a~-~~sSGmAAi~a-~la~~~~Gd~iv~~~~~Yg~t~~~~~~~l~~~GI~~~~v 119 (379)
T PRK06176 48 GNPTRFALEEL---IADLEGGV---KGF-AFASGLAGIHA-VFSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTII 119 (379)
T ss_pred CCHHHHHHHHH---HHHHHCCC---CEE-ECCCHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf 88549999999---99982986---533-12557999999-999868999899818988877674598764478499986
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+. .+.++++. .+...+++.||.+--.+.... .+++++++++|||-+ +-+...|++. +.|+++-|.
T Consensus 120 d~-----~d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~gi~~vvDNT~atP~~~~Pl~~-GaDiVihS~ 193 (379)
T PRK06176 120 DT-----SDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLL-GADIVVHSG 193 (379)
T ss_pred CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf 78-----676889965687745999977999876015858999999976987997367215133262341-898899954
Q ss_pred HHCCCCCCCC--EEEEECHHHHH-HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 1200176651--54456778887-65411445778312320011232103347864466644889999999986201031
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVE-RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG 268 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG 268 (391)
-|-++|-+.+ |.|+.+++.+. +... + .+ ..|. +++-+..|.+...| ..
T Consensus 194 TKyi~GhsD~l~G~vv~~~~~~~~~~~~------------~---~~-----~~G~---~l~p~~a~ll~rGL------~T 244 (379)
T PRK06176 194 TKYLGGHSDVVAGLVTTNNEALAQEIAF------------F---QN-----AIGG---VLGPQDSWLLQRGI------KT 244 (379)
T ss_pred CCCCCCCCCCCCEEEECCCHHHHHHHHH------------H---HH-----HCCC---CCCHHHHHHHHHCC------CC
T ss_conf 5011478774023883496899999999------------9---97-----5077---77846789997222------52
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 899999999779999999874797167-----6688200--------365317898247310113734567888999998
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQENDWIEN-----LAVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~~~~~~-----~~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
+.-|.+|+.+++..+-+|+++++.... +...|.+ .....++|.+.+.. ....+...
T Consensus 245 L~lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~~~la~~~~~g~gg~~sf~l~~~~-----------~a~~f~~~ 313 (379)
T PRK06176 245 LGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDS-----------EAVAFVES 313 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCHH-----------HHHHHHHH
T ss_conf 8999999999999999998719982679898999994399999767899985478856899-----------99999981
Q ss_pred HHHCCEEECCCCCCCC----------------------CCE-EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676----------------------750-568615888999999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA----------------------PLG-LRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~----------------------~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
|.--..+..+|+.++. +.+ +|+++| .||++.|++-|+.||++
T Consensus 314 l~lf~~a~slGg~eSLi~~P~~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~~DLi~Dl~~AL~~ 378 (379)
T PRK06176 314 LKLFILGESLGGVESLVGVPAFMTHACIPKEQREAAGIRDGLVRLSVG----IEHEQDLLEDLEQAFAK 378 (379)
T ss_pred CCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHC
T ss_conf 882546216688760424763225544899999866989394999951----19999999999999833
No 120
>PRK07550 hypothetical protein; Provisional
Probab=99.21 E-value=1.5e-07 Score=67.47 Aligned_cols=319 Identities=16% Similarity=0.044 Sum_probs=174.9
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHCCCC-CCC---CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 886888776-89689999863210365-328---9889999999999999996889985799974873489998753205
Q gi|254780153|r 14 PFFSSGPCA-KRPGWSLGILEGALLGR-SHR---CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL 88 (391)
Q Consensus 14 ~~F~pGP~~-~~p~~v~~~~~~~~l~~-sHR---s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~ 88 (391)
.|++-|=-. -+|..+++++...+..- .|+ +.=..++-+.+.+.+++.++.+-+-+=++++.|++.++..++.-|+
T Consensus 33 I~L~~G~Pdf~~p~~i~~a~~~a~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~pe~I~it~G~~~al~~~~~al~ 112 (387)
T PRK07550 33 IDLSQAVPVYPPPPELRRALAEAAGDPAAHLYGPVEGLPELREAYAAQYSRLYGAAINPGQVAITSGCNQAFWAAMVTLA 112 (387)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHC
T ss_conf 58989889898789999999999669888889898571999999999999986889967988987678999999999971
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----
Q ss_conf 78970799707368888876532387630674--057776578676785-----565799742024202203203-----
Q gi|254780153|r 89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG----- 156 (391)
Q Consensus 89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~----- 156 (391)
.+||.+++..=.|.... ..+...+ .....+ ....+..+++++++. .+.+.++.=..-||...+..+
T Consensus 113 ~pGD~Vli~~P~Y~~y~-~~~~~~G-~~~~~vp~~~~~~~~~d~~~le~~~~~~tk~iil~~P~NPtG~v~s~e~l~~l~ 190 (387)
T PRK07550 113 GAGDEVILPTPWYFNHK-MWLDMLG-IRAVLVPLDTGPGLLPDPEAAAALITPRTRAIVLVTPNNPTGVVYPPELLHELY 190 (387)
T ss_pred CCCCEEEEECCCCCCHH-HHHHHCC-CEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 89898998279675379-9999769-989734777567987799999975565783770389969988510779853465
Q ss_pred EECCCCCCEEEEEECCH-HHH---CCC------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf 50256861488640110-110---254------556857999700120017665--154456778887654114457783
Q gi|254780153|r 157 FIPESREGLVICDATSA-VFA---RHI------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLP 224 (391)
Q Consensus 157 ~~~~~~~~llivD~vSs-~g~---~p~------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~ 224 (391)
.+|..++..+|.|-+=+ +.. .|. ++.+--+.+.|.-|.++ -|| +|.++.+++.+++..+...
T Consensus 191 ~la~~~~~~iI~DEiY~~~~~~~~~~~~~~~~~~~~~~vI~i~S~SK~~~-~~G~RiG~i~~~~~~i~~~~~~~~----- 264 (387)
T PRK07550 191 DLARRRGLALILDETYRDFDSRGGAPHDLFADPDWGDTLVHLYSFSKAYR-LTGHRVGALAASPARLAEIEKFLD----- 264 (387)
T ss_pred HHCCCEEEEEEECCCHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCCCCC-CCCCEEEEEEECHHHHHHHHHHHH-----
T ss_conf 43033158999417578753388777667653366755999746764456-754217999839999999999997-----
Q ss_pred CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 12320011232103347864466644889999999986201031899999999779999999874797167668820036
Q gi|254780153|r 225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS 304 (391)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS 304 (391)
.+..+++...-++...+|+.... -++...+...++.+.+.+.+.+.+++... +. +
T Consensus 265 ------------------~~~~~~~~~~q~aa~~al~~~~~--~~~~~~~~~~~rr~~l~~~l~~~~~~~~~---~~--G 319 (387)
T PRK07550 265 ------------------TMAICAPRIGQIAVLWGIRNLAD--WVAGNRAEILRRRDALRAGFSRLPGWELL---AS--G 319 (387)
T ss_pred ------------------HHCCCCCHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEC---CC--C
T ss_conf ------------------60367877999999999863099--99999999999999999988646896547---88--3
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 531789824731011373456788899999-8886282872665-567675-05686158889999999999999
Q gi|254780153|r 305 NTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
..-+-+..+.+... ...+.. ++.+.|+++--|. +...+. -+|++.. ..++++++.-++-|+
T Consensus 320 ~~f~w~~~~~~~~~----------~~~~~~~ll~e~gV~v~PG~~Fg~~g~~~vRlsfa-~~~~~~i~ea~~RL~ 383 (387)
T PRK07550 320 AYFAYVRHPFPDAS----------SDEVARRLAKEAGILCLPGTMFGPGGERYLRLAFA-NIDVAGIAELVERLR 383 (387)
T ss_pred EEEEEEECCCCCCC----------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC-CCCHHHHHHHHHHHH
T ss_conf 47998837889989----------99999999986999997875338899897999946-799999999999998
No 121
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.21 E-value=2.6e-08 Score=72.23 Aligned_cols=308 Identities=15% Similarity=0.108 Sum_probs=163.2
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-------CCCCC-EE
Q ss_conf 968999986321036532898899-9999999999999688998579997487348999875320-------57897-07
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-------LGYRG-VD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-------~~~~~-~~ 94 (391)
+|+ |.+++.+++-...|.+.-|. +...+.-+.|.++.+. + +|+ +..||+.++|+++.=. -.++. .+
T Consensus 57 ~p~-i~~Ai~~Q~~~l~h~~~~~~~~~~~~lae~L~~~~~~--~-~v~-f~~sGseAvE~AiKlAr~y~~~~~~~~r~~i 131 (398)
T PRK02627 57 HPK-LVEAIQEQAAKLIHTSNLYYIPPQEELAEKLVELSGM--D-KVF-FCNSGAEANEAAIKLARKYGHTKGGIEKPEI 131 (398)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--C-EEE-EECCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 899-9999999998567866654670899999999752499--8-799-8287799999999999999886478888679
Q ss_pred EEEECCHHHHHHHHHHHCCCCC---------EEEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------EE
Q ss_conf 9970736888887653238763---------067405777657867678556579974202420---22032------03
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSLQD---------VREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------VG 156 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------~~ 156 (391)
+...++|=++.......-+... ......|++....++..-....++.+-.|...| +..|. ..
T Consensus 132 i~~~~syHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~~iAAvi~EPiqg~gG~~~~~~~yl~~lr 211 (398)
T PRK02627 132 ITAENSFHGRTLATLSATGQPKYQKGFEPLVPGFIYVPFNDIEALEAAINNPRTAAVLLEPIQGEGGVNPADKEYLQALR 211 (398)
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 99537869997510013788222367678888805624772999999845898799998278888898658888999999
Q ss_pred EECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 5025686148864011011025---4--5568579997001200176651544567788876541144577831232001
Q gi|254780153|r 157 FIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 157 ~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
.+|+++++++|+|=|.+=.++- + +.+++.-.+...-|+|++===++.++.+++..+.. .+
T Consensus 212 ~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~Plsav~~~~~i~~~~---~~------------ 276 (398)
T PRK02627 212 ELCDENNILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLGGGVPIGAVLAKGKAADVF---TP------------ 276 (398)
T ss_pred HHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCEECCHHHHHHC---CC------------
T ss_conf 998650740775300017785565104332697888577600024889871243169999636---79------------
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE-EE
Q ss_conf 12321033478644666448899999999862010318999999997799999998747971676688200365317-89
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI-CM 310 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v-~~ 310 (391)
...++|+.--|+ ...+...+|+.+++++ + .++.+++.+.+.+.+++.---.+.+. +.|..... .+
T Consensus 277 -------g~h~~T~~gnpl-a~aaa~a~L~~i~~~~-l---~~~~~~~g~~l~~~L~~l~~~~~~v~--~vRG~Gl~~gi 342 (398)
T PRK02627 277 -------GDHGSTFGGNPL-ACAAALAVLDIIEEEG-L---LENAAERGEYLRAGLRELLEKYPIIK--EVRGLGLMIGI 342 (398)
T ss_pred -------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHHHHCCCEE--EEEECCEEEEE
T ss_conf -------987888999989-9999999999998648-9---99999999999999999997199836--77322579999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.+..+ ...+...+.++|+++...+ +..+|+.--=.++.++++.+++.|+.++.++
T Consensus 343 el~~~-------------~~~~~~~~~~~Gll~~~~g----~~~ir~~PPL~it~~eid~~~~~l~~al~ev 397 (398)
T PRK02627 343 ELKRP-------------AKELVKKALEKGLLINVTG----DNVLRLLPPLIISKEEIDELVDRLDEVLKEL 397 (398)
T ss_pred EECCC-------------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 96787-------------9999999997897895079----9989998892089999999999999999986
No 122
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.21 E-value=1.6e-07 Score=67.25 Aligned_cols=287 Identities=16% Similarity=0.087 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CCC
Q ss_conf 9999999999999996889985799974873489998753205789707997073688888765323876306740-577
Q gi|254780153|r 46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-APY 124 (391)
Q Consensus 46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~ 124 (391)
..++-+.+.+.++..++.+-+.+-++++.|++.++..++..+.++|+.+++..=.|..- ...+...+ ..+..+. .+.
T Consensus 38 ~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~-~~~~~~~g-~~~~~v~~~~~ 115 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGY-EAAARLAG-AEVVPVPLDEE 115 (350)
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHH-HHHHHHCC-CCCCCCCCCCC
T ss_conf 19999999999878738997479789926999999999999808989899947986306-99999829-94125565600
Q ss_pred C-CCCCHHHC-----CCCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHH---HCCC------CCCCC
Q ss_conf 7-65786767-----85565799742024202203203-----5025686148864011011---0254------55685
Q gi|254780153|r 125 G-SLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVF---ARHI------DFNKL 184 (391)
Q Consensus 125 g-~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g---~~p~------d~~~i 184 (391)
+ ...+.+.. +..+.+.++.-..-||...+..+ .+|..++.++|+|-+=.-. ..+. +...-
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 195 (350)
T cd00609 116 GGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYER 195 (350)
T ss_pred CCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHCCCCCE
T ss_conf 38676689999856889978985699497254633788989999986238626885341220369988896785577980
Q ss_pred EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 7999700120017665--15445677888765411445778312320011232103347864466644889999999986
Q gi|254780153|r 185 DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLW 262 (391)
Q Consensus 185 Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~ 262 (391)
-+++.|.-|.++ -|| +|.++.+++.+.+..... ...+...++....+++...++.
T Consensus 196 ~i~~~S~SK~~~-l~GlRiG~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~q~~~~~~l~~ 252 (350)
T cd00609 196 VIVLRSFSKTFG-LPGLRIGYLIAPPEELLERLKKL----------------------LPYTTSGPSTLSQAAAAAALDD 252 (350)
T ss_pred EEEEECCCCCCC-CCCCCEEEEEECHHHHHHHHHHH----------------------CCCCCCCCCHHHHHHHHHHHHC
T ss_conf 899911723037-94537799998889999999862----------------------4214678987999999999868
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
Q ss_conf 20103189999999977999999987479716766882003653178982473101137345678889999988862828
Q gi|254780153|r 263 LKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIA 342 (391)
Q Consensus 263 i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 342 (391)
-. .-++...++.+++.+.+.+.+.+.+...... ++ +..-+.+.+++.. . ...+...+.++|++
T Consensus 253 ~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--p~--~g~f~~~~~~~~~--------~---~~~~~~~l~~~gv~ 315 (350)
T cd00609 253 GE--EHLEELRERYRRRRDALLEALKELGPLVVVK--PS--GGFFLWLDLPEGD--------D---EEFLERLLLEAGVV 315 (350)
T ss_pred CH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC--CC--CCEEEEEECCCCC--------H---HHHHHHHHHHCCEE
T ss_conf 29--9999999999999999999998579961207--99--5539989899998--------2---99999999979999
Q ss_pred ECCCCCC--CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 7266556--767505686158889999999999999
Q gi|254780153|r 343 YDIGSYR--DAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 343 ~~~~~~r--~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+..++.- .....+||+.... .++++..++.|.
T Consensus 316 v~~g~~f~~~~~~~iRl~~~~~--~~~~~~~~~rl~ 349 (350)
T cd00609 316 VRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred EEECHHHCCCCCCEEEEEECCC--HHHHHHHHHHHC
T ss_conf 9924564889989799996398--999999999857
No 123
>PRK07908 hypothetical protein; Provisional
Probab=99.21 E-value=9.2e-08 Score=68.73 Aligned_cols=312 Identities=17% Similarity=0.131 Sum_probs=168.1
Q ss_pred CCCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 68998886888776-89689999863210365328988999999999999999688998579997487348999875320
Q gi|254780153|r 9 RKPKRPFFSSGPCA-KRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL 87 (391)
Q Consensus 9 ~~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl 87 (391)
..|.-..||.|=-+ -+|..+++++...+-+ .||=|+ .+-..+.++.+.+.++++.+ +|++..| ++.++..... +
T Consensus 19 ~~pgiidlS~n~np~gpp~~v~~al~~a~~~-~~~YP~-~~~~~~Lr~aiA~~~gv~~d-~I~~gnG-s~E~i~~l~~-~ 93 (346)
T PRK07908 19 AAPGLLDFAVNVRADRPPEWLRERLAARLPD-LARYPS-TEDVRRARAAVAARHGRTRD-EVLLLAG-AAEGFALLAR-L 93 (346)
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHCCC-CCCCCC-CCCHHHHHHHHHHHHCCCHH-HEEEECC-HHHHHHHHHH-H
T ss_conf 8999778889999989799999999975554-668939-86569999999999785889-9987437-9999999999-7
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEE-EEEEECCCCEEECCEEE--ECCCCCC
Q ss_conf 57897079970736888887653238763067405777657867678556579-97420242022032035--0256861
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVV-FVWNGTTSGVCVPDVGF--IPESREG 164 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~-~~h~ETstGv~~~~~~~--~~~~~~~ 164 (391)
.+++.+++ .=.|+.. ..+.+..+..+..+........+.+.++....+. ++.=..-||...+..++ ++ ..+.
T Consensus 94 -~~~~~vi~-~P~f~~y--~~~~~~~g~~v~~v~l~~~~~ld~~ai~~~~~lv~l~nPnNPTG~~~~~e~l~~l~-~~~~ 168 (346)
T PRK07908 94 -LPRRAAVV-HPSFTEP--EAALRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVVGNPTNPTSVLHPAEQLLALR-RPGR 168 (346)
T ss_pred -CCCCEEEE-CCCCHHH--HHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHH-CCCC
T ss_conf -48996997-8885799--99999869925995079866689657676789899799979877867899999985-3498
Q ss_pred EEEEEECC-HHH-HCC--CCCCCC-E-EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 48864011-011-025--455685-7-9997001200176651--54456778887654114457783123200112321
Q gi|254780153|r 165 LVICDATS-AVF-ARH--IDFNKL-D-VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 165 llivD~vS-s~g-~~p--~d~~~i-D-v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
++|+|-.= .|. +.+ +-.... + +++-|--|.++ -||+ |+++.+++.+++....+..+.
T Consensus 169 ~lVvDEaY~df~~~~~~s~~~~~~~nvivlrSfSK~yg-laGlRiGy~va~~~~i~~l~~~~~~~~-------------- 233 (346)
T PRK07908 169 ILVVDEAFADAVPGEPESLAGDALPDLLVLRSLTKTWS-LAGLRVGYALGAPELLARLTAQRAHWP-------------- 233 (346)
T ss_pred EEEEEHHHHHCCCCCCHHHHHHCCCCEEEEECHHHHHC-CCHHHHEEEECCHHHHHHHHHHCCCCC--------------
T ss_conf 99995115432589713444424898899924357625-772551321169999999998277888--------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCC
Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789-82473
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDS 315 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~ 315 (391)
.++++ +.+....+. -....-.....++..+..+.+++.+.+.++.... -|.++..+ ++++
T Consensus 234 --------v~~~a---~~a~~a~~~-~~~~~~~~~~~~~~~~~R~~l~~~L~~~g~~~~~------ps~anF~l~~~~~- 294 (346)
T PRK07908 234 --------LGTLQ---LEAIAACCA-PRAVAEAAADAERLAALRAEMVAGLRAVGAEVVD------PGAAPFVLVRVPD- 294 (346)
T ss_pred --------CCHHH---HHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC------CCCEEEEEEECCC-
T ss_conf --------87999---999999958-7568999999999999999999999977886538------9950899986899-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCC-CCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 1011373456788899999888628287266-5567675-056861588899999999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIG-SYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
...+...|.++|+++.-+ .+...++ -+||+.+ ++++.++|+++|+..++
T Consensus 295 -------------a~~~~~~L~~~gIlVr~~~~f~gl~~~~iRiav~---~~een~rli~aL~~il~ 345 (346)
T PRK07908 295 -------------AELVRKRLRERGIAVRRGDTFPGLDPDYLRAAVR---PEWPVDRLVQAIAEILR 345 (346)
T ss_pred -------------HHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHC
T ss_conf -------------9999999980895999788778879898999838---89999999999999974
No 124
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.21 E-value=4.8e-08 Score=70.52 Aligned_cols=284 Identities=17% Similarity=0.162 Sum_probs=161.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+-+.. -.++.+||-+|..+++++++++|+.+++....||.- ..+.+.+.+ .+++..
T Consensus 51 gnPT~~~le~~l---a~LEg~~----~a~~~sSGmaAi~~~ll~~l~~Gd~il~~~~~Yg~t~~l~~~l~~~G-i~v~~~ 122 (384)
T PRK08574 51 ENPTVRPLEEKL---AKLEGGV----DALAFNSGMAAISTLFFSLLKAGDEVVLPMEAYGTTLRLLKSLEKFG-VRVRLA 122 (384)
T ss_pred CCHHHHHHHHHH---HHHHCCC----EEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHC-CEEEEE
T ss_conf 886599999999---9981997----18995587999999999816899989984897145999999998608-579994
Q ss_pred ECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCE-----EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCHH
Q ss_conf 05777657867678556579974202420220320-----3502568614886401--1011025455685799970012
Q gi|254780153|r 121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDV-----GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQK 193 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~-----~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQK 193 (391)
... ..+..+.-.....-+++.||.+--...+. ..+++.+++++|||-+ |-+...|++ .++|+++-|.-|
T Consensus 123 ~~~---~~~~~~~~~~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vvDNT~atP~~~~Pl~-~GaDivvhS~TK 198 (384)
T PRK08574 123 YPS---TEDLIEAIKESRTKLVFIETITNPTLRVIDVPEVAKAAKDLGAILVVDNTFATPILYRPLE-HGADFVVHSLTK 198 (384)
T ss_pred CCC---CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHH-HCCCEEEEECCC
T ss_conf 899---7899997447885499998899987634785999999977598599737751264268066-489889995462
Q ss_pred CCCCCCCC--EEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 00176651--544567788-876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r 194 VLGGEAGF--GIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS 270 (391)
Q Consensus 194 ~l~~ppGl--~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~ 270 (391)
-++|-..+ |.++.+.+. .++.. .+.. ..|. +++-+..|.+...| ..+.
T Consensus 199 yi~GHsdv~~G~vv~~~~~~~~~l~------------~~~~--------~~G~---~lsp~~a~l~~rgl------~TL~ 249 (384)
T PRK08574 199 YIAGHNDVLGGVAVVWNGEFLEELW------------VWRR--------RLGT---IMQPFEAWLVLRGL------KTLE 249 (384)
T ss_pred EECCCCCCEEEEEEECCHHHHHHHH------------HHHH--------HHCC---CCCCHHHHHHHCCC------CCHH
T ss_conf 1038867341389835178899999------------9999--------8289---88923478886065------8799
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC-------C--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999997799999998747971676-----688200-------3--653178982473101137345678889999988
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENL-----AVDETT-------R--SNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~-------r--S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
-|.+|+.+++..+-+|+++++..... ...|.+ . .-..++|.+.... .....+...|
T Consensus 250 lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~shp~~~~a~~~~~g~~G~~~sf~l~~~~----------~~~~~f~~~L 319 (384)
T PRK08574 250 VRFERQCENAMAIAEFLSEHPKVREVHYPGLPSDPYHEVAKRLFGDLYGGVVSFRVKGGR----------DAVLKFLRSL 319 (384)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCH----------HHHHHHHHHC
T ss_conf 999999999999999997099988898988899947899998679997649999972999----------9999999828
Q ss_pred HHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 862828726655676----------------------75-0568615888999999999999999999
Q gi|254780153|r 337 EKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 337 ~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.--.....+|+..+. .. -+|+++|= ||++.|++-|+.||..
T Consensus 320 ~lf~~~~SlGg~eSLi~~P~~~sh~~~~~e~r~~~Gi~~~liRlSvGl----Ed~~DLi~DL~~AL~~ 383 (384)
T PRK08574 320 KLIFPSPSLGGVESIATYPVASAASPIPEEDRKILGITEDLVRLSVGL----EDVEDLIEDLDQALNS 383 (384)
T ss_pred CCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf 857343164754222247310367559999999729893949999410----9999999999999834
No 125
>PRK06575 consensus
Probab=99.21 E-value=8.4e-08 Score=68.97 Aligned_cols=321 Identities=9% Similarity=-0.019 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 689999863210----365328988999999999999999688998-579997487348999875320578970799707
Q gi|254780153|r 25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391)
Q Consensus 25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391)
|..|++++.+.+ .++++ +.-..++-+.+.+.+++-++.+=+ -+|++ +.|++.++..+++.++++||.+++-+=
T Consensus 46 p~~i~~a~~~a~~~g~~~Y~~-~~G~~~Lr~aia~~~~~~~~~~~~~d~i~v-t~G~~~al~~~~~~l~~pGD~Vli~~P 123 (399)
T PRK06575 46 PDNIKEAAIKAIKDGFTKYTN-VEGMPLLKQAIKDKFKRENNIDYELDEIIV-STGGKQVIYNLFMASLDKGDEVIIPAP 123 (399)
T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEEE-ECCCCHHHHHHHHHHCCCCCEEEECCC
T ss_conf 999999999998559998899-878399999999999998589998431999-489528999999986589998997478
Q ss_pred CHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCC-CCEEE
Q ss_conf 368888876532387630674-057776578676785-----5657997420242022032035-----02568-61488
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESR-EGLVI 167 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~-~~lli 167 (391)
.|..- ...+...++..+... ..+.+..+++++++. .+.+.++.=..-||...+..+. +|.++ +..+|
T Consensus 124 ~y~~y-~~~~~~~~~~~v~~~~~~e~~~~~d~e~l~~~~~~~~k~iil~nP~NPTG~v~~~eel~~i~~~~~k~~~v~ii 202 (399)
T PRK06575 124 YWVSY-PDMVALSTGTPVFVNCGIENNFKLSAEALERSITDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYPHVNVM 202 (399)
T ss_pred CCCCH-HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 53235-89999828856994157554655589999864444767999899999988878899999999998745873784
Q ss_pred EEECCHHHHC---C---C-----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 6401101102---5---4-----556857999700120017665--1544567788876541144577831232001123
Q gi|254780153|r 168 CDATSAVFAR---H---I-----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 168 vD~vSs~g~~---p---~-----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
.|-+-+-... + + ++.+--+.+.|.-|.++ -|| +|.++.++..+++.....
T Consensus 203 sDEiY~~~~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~~~~~~~~i~~~~~~~---------------- 265 (399)
T PRK06575 203 SDDIYEHITFDDFKFYTLAQIAPDLKERIFTVNGVSKAYS-MTGWRIGYGAGSKALIKAMTIIQ---------------- 265 (399)
T ss_pred CHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCC-CCCCCEEEEECCHHHHHHHHHHH----------------
T ss_conf 2135666416898774113307654223257414210147-87723375308799999999999----------------
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
.+....|+...-++...+|+.... =++....+++++.+.+.+.++..+++....++-.+. +-+.++.
T Consensus 266 -------~~~~~~~~~~~q~aa~~al~~~~~--~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~P~G~~y----l~~~~~~ 332 (399)
T PRK06575 266 -------SQSTSNPCSISQMAAIEALNGPQD--YIKPNALNFQKKRDLALSILKRVKYFECYKPEGAFY----LFVKCDK 332 (399)
T ss_pred -------HCCCCCCCHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEE----EEEECCC
T ss_conf -------615678668999999999858477--899999999999999999986479844617992379----9577730
Q ss_pred CCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 310113734567888999998-886282872665-5676750568615888999999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
................++... +.+.++++--|- +.. ..-||++.. .+.+.++.-++-|+.++..
T Consensus 333 ~~~~~~~~~~~~~~~~~f~~~Ll~e~~V~v~PG~~FG~-~g~~Rl~~a--~~~e~l~ea~~Rl~~a~~~ 398 (399)
T PRK06575 333 IFGHKTKSGKIIANSNDFAEYLLEEAKVAVVPGIAFGL-EGYFRISYA--TSMEELEEACIRIERACNV 398 (399)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC-CCEEEEEEC--CCHHHHHHHHHHHHHHHHH
T ss_conf 01544434676789999999999729999984855589-983999973--9899999999999999974
No 126
>PRK04152 consensus
Probab=99.20 E-value=1.9e-07 Score=66.78 Aligned_cols=303 Identities=16% Similarity=0.107 Sum_probs=171.8
Q ss_pred CCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf 868887768-9689999863210365328988999999999999999688998579997487348999875320578970
Q gi|254780153|r 15 FFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV 93 (391)
Q Consensus 15 ~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~ 93 (391)
.|+.+=.+. +|..+++++...+-. .||=|+- -..+.++.+.+.++++.+ .|+ +..|++..+..++..++.+|+.
T Consensus 35 ~ls~NeNP~g~p~~~~~ai~~~~~~-~~~YPd~--~~~~Lr~~iA~~~gv~~~-~I~-vgnGs~e~i~~~~~~~~~~g~~ 109 (364)
T PRK04152 35 KLASNENPFGTSPKVIEAIRKNASK-AHLYPDD--SMFELKSALASKFDVESE-NII-IGAGSDQVIEFAIHAKLNEKSS 109 (364)
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHH-CCCCCCC--CHHHHHHHHHHHHCCCHH-EEE-ECCCHHHHHHHHHHHHHCCCCE
T ss_conf 8179999999999999999987873-7679996--799999999998695830-099-8569999999999998389984
Q ss_pred EEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH------CCCCCCEEEEEEECCCCEEECCEEE---EC-CCCC
Q ss_conf 799707368888876532387630674057776578676------7855657997420242022032035---02-5686
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK------VDFDRDVVFVWNGTTSGVCVPDVGF---IP-ESRE 163 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~v~~~h~ETstGv~~~~~~~---~~-~~~~ 163 (391)
+++..-.|+.. ...++..+..+... +..+ .++++ .+..+.+.+|+=..-||...+..++ +. ...+
T Consensus 110 vl~~~Ptf~~Y--~~~a~~~g~~v~~~--~~~~-~dl~~~~~~~~~~~~~lv~l~nPNNPTG~~~~~~~l~~~~~~~~~~ 184 (364)
T PRK04152 110 VLMAGVTFAMY--EIYAKQCGAKIYKT--QSVE-HDLNEFLELYKSHKPKIIFLCLPNNPLGECLDASEVYKFIKGIDED 184 (364)
T ss_pred EEECCCCHHHH--HHHHHHCCCEEEEC--CCCC-CCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 46589872689--99999839879966--8743-3989999986377985899879999867246651249999754557
Q ss_pred CEEEEEECC-HHHHCC-----CC----CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 148864011-011025-----45----56857--9997001200176651--5445677888765411445778312320
Q gi|254780153|r 164 GLVICDATS-AVFARH-----ID----FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 164 ~llivD~vS-s~g~~p-----~d----~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
.++|+|=.= .|...+ +. ..+.+ ++.-+--|.+| -||+ |.++.+++.+++..+...
T Consensus 185 ~~vvvDEAY~ef~~~~~~~~~~~~~~l~~~~~nlivlrsfSK~~g-laGlRlGy~ia~~~~i~~l~k~~~---------- 253 (364)
T PRK04152 185 TLVVIDAAYMEFAKFKDSKKHIEPKELIKLFPNVIYLGTFSKAYG-LGGMRVGYGIANAEIISALYKLRP---------- 253 (364)
T ss_pred CEEEEEHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCHHHCC-CCCCCCCCCCCCHHHHHHHHHHCC----------
T ss_conf 768741677888603775345588998742797899832605237-877735201389999999998538----------
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
++.-+.....+...+|+. +.-++...+...+..+.+.+.+... ++..+. |.+|-.
T Consensus 254 ---------------p~~vn~~a~~aa~~aL~~---~~~~~~~~~~~~~er~~~~~~~~~~-g~~~~p------s~aNFi 308 (364)
T PRK04152 254 ---------------PFNVTTLSLKAAIEALKD---EEFVEKTLENNFKEMKRYEEFAKEQ-GIEFID------SYTNFI 308 (364)
T ss_pred ---------------CCCCCHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC------CCCCEE
T ss_conf ---------------988679999999999379---9999999999999999999998858-884899------988789
Q ss_pred -EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf -982473101137345678889999988862828726-6556767505686158889999999999999999
Q gi|254780153|r 310 -MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 310 -~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
+.++... ....+.+.|.++|+++.- ..|.. ..+||+.+ ++++.++|+++|+.++
T Consensus 309 l~~~~~~~-----------~a~~l~~~L~~~gI~VR~~~~~g~--~~iRIsvg---~~een~~li~aL~~vL 364 (364)
T PRK04152 309 TFFFDERK-----------NSTEISQKLLKKGIIVRNLKSYGL--NAIRITIG---TPEQNDRVFEELDKEL 364 (364)
T ss_pred EEECCCCC-----------CHHHHHHHHHHCCEEEEECCCCCC--CEEEEECC---CHHHHHHHHHHHHHHC
T ss_conf 89899999-----------999999999968919985798996--97999739---9999999999999759
No 127
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.20 E-value=8.8e-08 Score=68.87 Aligned_cols=318 Identities=12% Similarity=0.015 Sum_probs=167.5
Q ss_pred CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-------CCCCCCEE
Q ss_conf 968999986321036532898-89-9999999999999968899857999748734899987532-------05789707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-------LLGYRGVD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-------l~~~~~~~ 94 (391)
+|+ |.+++.+++=..+|-+. .| .+...+.-+.|.+++ |.+..-+++..||+.|+|+++.= .-.++..+
T Consensus 60 ~p~-i~~Ai~~q~~~l~~~~~~~~~~~~~~~lA~~L~~~~--p~~~~~v~f~~SGsEA~e~AiKlA~~y~~~~g~~r~~i 136 (421)
T PRK05964 60 HPH-IDAAIREQLDRLDHVMFAGFTHEPAERLAKRLVALT--PGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPRSRF 136 (421)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 899-999999999757875468757589999999999847--87758799947813699999999999998639975189
Q ss_pred EEEECCHHHHHHHHHHH--------C-CC--CCEEEEECCCCCC-CCHHHCC-----CCCCEEEEEEEC-C---CCEEEC
Q ss_conf 99707368888876532--------3-87--6306740577765-7867678-----556579974202-4---202203
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQ--------L-SL--QDVREFTAPYGSL-PDFSKVD-----FDRDVVFVWNGT-T---SGVCVP 153 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~--------~-~~--~~~~~~~~~~g~~-~~~~~~~-----~~~~v~~~h~ET-s---tGv~~~ 153 (391)
+...++|=++......- . .. ..+.....|.... ...+.++ ....++.+-.|. . .|+..+
T Consensus 137 i~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~le~~~~~~~~~iAAvi~EP~iqg~GG~~~~ 216 (421)
T PRK05964 137 LSLRGGYHGDTLGTMSVGMHGLFNATYGPLLFQVLALPVPRDYEQAYLDALEALLEKHAGEIAAVIVEPLVQGAGGMLFY 216 (421)
T ss_pred EEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 99738868985134323575334578888888876558998633889999999997479977899997884678997678
Q ss_pred C------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCC-CCCCEEEEECHHHHHHHHHCCCCC
Q ss_conf 2------0350256861488640110-110--254--556857999700120017-665154456778887654114457
Q gi|254780153|r 154 D------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGG-EAGFGIIILSPASVERLEKYVPSW 221 (391)
Q Consensus 154 ~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~-ppGl~~v~~s~~al~~~~~~~~~~ 221 (391)
. ...+|+++++++|+|=|.+ ||- .-+ +..++.=.+...-|+|++ --=++.++.+++..+.........
T Consensus 217 p~~y~~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDivt~gKgl~gG~~Pisav~~~~~i~~~~~~~~~~~ 296 (421)
T PRK05964 217 DPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFDAFYSDDRAK 296 (421)
T ss_pred CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHCCCCCCC
T ss_conf 88999999887100680465121102687567887543002589878872203578762489998589997631678776
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
....++|+. -+-....+..++|+.++++. ..++.+++.+.+.+.++...- .+.+.+
T Consensus 297 ----------------~~~h~~T~~-gnpla~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~-~~~I~d-- 352 (421)
T PRK05964 297 ----------------AFMHSPSYT-ANPLACAAANASLDLFEDEP----VLERVAALSAGLTEGLEPFRD-LPRVAD-- 352 (421)
T ss_pred ----------------CCCCCCCCC-CCHHHHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHHHHCC-CCCEEE--
T ss_conf ----------------400378888-89699999999999996451----999999999999999997435-997676--
Q ss_pred CCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 03653178-98247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r 302 TRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 302 ~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.|...... +.+..+ ........+...+.++|.++.. .++.+|+.--=.++.+||+.+++.||.++.
T Consensus 353 vRG~GL~~~ie~~~~--------~~~~~~~~i~~~~~~~Glli~~-----~gn~ir~~PpL~it~~eid~~~~~l~~al~ 419 (421)
T PRK05964 353 VRVLGAIGAVELDRP--------DDGRIGPALTAAFLDRGVLLRP-----LGNTIYLMPPYIITPEELARITDAIVEVAD 419 (421)
T ss_pred EEECCEEEEEEEECC--------CCHHHHHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 410462999997257--------8679999999999978909996-----699999978936899999999999999996
Q ss_pred H
Q ss_conf 9
Q gi|254780153|r 381 F 381 (391)
Q Consensus 381 ~ 381 (391)
+
T Consensus 420 e 420 (421)
T PRK05964 420 E 420 (421)
T ss_pred H
T ss_conf 2
No 128
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=3.6e-08 Score=71.30 Aligned_cols=316 Identities=16% Similarity=0.098 Sum_probs=167.3
Q ss_pred CHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 968999986321036532898--89999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|+ |.+++.+++=...|.+. -+.+...+.-+.|.+++ |.+...+++..|||.+.|+++.=.. .....++...+
T Consensus 59 ~p~-i~~Av~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsEAve~AiklAr~~tgr~~ii~~~~ 135 (429)
T PRK08117 59 HPK-VVQAIKEQADRLVHGGSGVIYYESILKLAEELAEIT--PGGLDMFFFSNSGAEAIEGALKLAKHVTKRQGIISFTG 135 (429)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 699-999999998634776777547769999999999848--78878899948746899999999998638985999845
Q ss_pred CHHHHHHHHHH---------HC-CC--CCEEEEECCC------CCCCC------HHHCC-------CCCCEEEEEEECCC
Q ss_conf 36888887653---------23-87--6306740577------76578------67678-------55657997420242
Q gi|254780153|r 100 SFGLGWMSDIR---------QL-SL--QDVREFTAPY------GSLPD------FSKVD-------FDRDVVFVWNGTTS 148 (391)
Q Consensus 100 ~~~~r~~~~~~---------~~-~~--~~~~~~~~~~------g~~~~------~~~~~-------~~~~v~~~h~ETst 148 (391)
+|-++-..... +. .. ..+.....|+ +...+ +.+++ ....++.+-.|...
T Consensus 136 ~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAviiEPi~ 215 (429)
T PRK08117 136 AFHGRTLGALSVTTSSSKYRKRYQPLLPSVYHAPYPYCFRCPIGRDPESCSLECLRDLESLFKRQIAPEEVAAIIIEPVL 215 (429)
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 77888660455316753234577899998366378863256567880566899999999999862488878999996466
Q ss_pred C---EEECCE------EEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCC--CEEEEECHHH
Q ss_conf 0---220320------35025686148864011011025---4--55685--7999700120017665--1544567788
Q gi|254780153|r 149 G---VCVPDV------GFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSPAS 210 (391)
Q Consensus 149 G---v~~~~~------~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~a 210 (391)
| +..|.. ..+|+++++++|+|=|.+=.++- + +.+++ |++ .--|+|++ | ++.++.+++.
T Consensus 216 g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PDiv--~~gK~lgg--G~Plsav~~~~~i 291 (429)
T PRK08117 216 GEGGYIVPPKEFLQKVREICDEHGILLIFDEVQSGFGRTGKWFAAETFGVVPDIM--TVAKGIAS--GFPLSAVVASKEL 291 (429)
T ss_pred CCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEE--EEEECCCC--CCCCCCCCCCHHH
T ss_conf 7889373888999999999876391797343110777667732654049899878--87101447--8986422147999
Q ss_pred HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 87654114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r 211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN 290 (391)
Q Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~ 290 (391)
.+.. . ....++|+.--|+ ...+..++|+.+++++ ..++.+++.+.+++.+...
T Consensus 292 ~~~~---~-------------------~~~~~~T~~gnp~-~~aaa~a~L~~~~~~~----l~~~v~~~g~~l~~~L~~l 344 (429)
T PRK08117 292 MDQW---P-------------------LGAHGTTFGGNPV-ACAAALATLEVIKEEK----LLENANNMGAYALERLEKL 344 (429)
T ss_pred HHCC---C-------------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHH
T ss_conf 7066---8-------------------8886858998989-9999999999997556----9999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf 9716766882003653178-982473101137345678889999988862828726655676750568615888999999
Q gi|254780153|r 291 DWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLL 369 (391)
Q Consensus 291 ~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~ 369 (391)
---.+.+. +.|...... +.+.++... ........+...+.++|+++...| ..++.+|+.--=.++.+||+
T Consensus 345 ~~~~p~v~--~VRG~Gl~~giel~~~~~~-----~~~~~~~~i~~~~~~~Gll~~~~g--~~~n~i~~~PPL~is~~eid 415 (429)
T PRK08117 345 KEKYPVIG--DVRGIGLMIGIEFVDETGE-----PDGDAVEKILDKCLENGLLLYGCG--NDGNVLRFIPPLTVTKEEID 415 (429)
T ss_pred HHHCCCEE--EEECCCEEEEEEEECCCCC-----CCHHHHHHHHHHHHHCCCEEEECC--CCCCEEEEECCCCCCHHHHH
T ss_conf 97199878--8522667999999648889-----469999999999996995898447--99998999799779999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780153|r 370 LLCDWLRWVFYFQ 382 (391)
Q Consensus 370 ~L~~aLe~~~~~~ 382 (391)
.+++.||.++.+.
T Consensus 416 ~~~~~l~~al~e~ 428 (429)
T PRK08117 416 QGLSILDKGLGEY 428 (429)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999976
No 129
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.20 E-value=1.1e-08 Score=74.68 Aligned_cols=312 Identities=14% Similarity=0.133 Sum_probs=183.2
Q ss_pred HHHHHHHHCCCC-----C-CC---C-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 999863210365-----3-28---9-889999999999999996889985799974873489998753205789707997
Q gi|254780153|r 28 SLGILEGALLGR-----S-HR---C-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 28 v~~~~~~~~l~~-----s-HR---s-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
|++++...+-+. . .| + .-+.++=.-+.++.+++|+... +=+-+-||+.|+-++.+.|++|||.++..
T Consensus 47 v~~a~gS~ltnkYaEGyPg~RyY~G~~~iD~iE~la~~rak~LF~a~~---anVqp~SGs~AN~av~~all~PGD~im~l 123 (422)
T PRK13034 47 VLQAQGSVLTNKYAEGYPGKRYYGGCEHVDEVEALAIERAKQLFGADY---ANVQPHSGSQANGAVYLALLKPGDTILGM 123 (422)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 999856621264668899865547753699999999999999849996---35477861999999999964899868843
Q ss_pred E----CCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECCCCCCE
Q ss_conf 0----73688888765323876306740-57776578676785-----565799742024202203--203502568614
Q gi|254780153|r 98 W----ESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPESREGL 165 (391)
Q Consensus 98 ~----g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~~~~~l 165 (391)
. |+.+.....-+.-.. .+...+. .+.....|.+++.. .+.+.++-- ++.--..| ....++.+.+++
T Consensus 124 ~l~~GGHltHG~~~~~sg~~-~~~~~Y~vd~~~~~IDyd~l~~~a~~~kPklIi~G~-Say~r~id~k~~reIAd~vGA~ 201 (422)
T PRK13034 124 SLDAGGHLTHGAKVALSGKW-FNAVQYGVDRDTGLIDYDQVERLAVEHKPKLIIAGF-SAYPRTLDFARFRAIADSVGAI 201 (422)
T ss_pred CCCCCCCCCCCCCCCCCCCE-EEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCHHHHHHHHHHHCCE
T ss_conf 67777625578875534560-478982175323822799999998731998699666-1244212889999999872977
Q ss_pred EEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC
Q ss_conf 8864011011-----02545568579997001200176651544567788876541144577831232001123210334
Q gi|254780153|r 166 VICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240 (391)
Q Consensus 166 livD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
+++|+.--.| ..|=+....|++.++.+|-|.||-|=-+++=+++.-+++.... +
T Consensus 202 l~~D~AHiaGLIA~g~~psP~~~ADvvT~TTHKTLrGPrGGiIl~~~~el~~kId~av---------------------F 260 (422)
T PRK13034 202 LMVDMAHIAGLVAAGRHPNPVPHAHVVTTTTHKTLRGPRGGMILTNDEEIAKKINSAV---------------------F 260 (422)
T ss_pred EEECHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHCCC---------------------C
T ss_conf 9811565545410333699877752886775147789884357526699999864333---------------------8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 78644666448899999999862010318999999997799999998747971676688200365317898247310113
Q gi|254780153|r 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL 320 (391)
Q Consensus 241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~ 320 (391)
..+-..|-.+.|.+...++.+.... +.....++..++++.+-+.+...+ +.... -...+.. +.+.+....+.
T Consensus 261 -Pg~qggp~~h~iAa~Ava~~Ea~~~-~f~~Ya~qVv~NAkaLa~~L~~~G-~~vv~--ggTdnHl-vlvDl~~~gi~-- 332 (422)
T PRK13034 261 -PGLQGGPLMHVIAAKAVAFGEALEP-GFKTYIDQVIANAQALAEVLKARG-YDLVT--GGTDNHL-LLVDLRPKGLT-- 332 (422)
T ss_pred -CCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CCCCCCE-EEEECCCCCCC--
T ss_conf -8645671577899999999996687-699999999999999999999789-80457--9998763-66535656775--
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCC--C--CC--CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHH
Q ss_conf 734567888999998886282872665--5--67--67505686158----88999999999999999999
Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGS--Y--RD--APLGLRVWVGV----TVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~--~--r~--~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~ 381 (391)
-+.....|.+.|+.+.-+. + ++ .+.|+|||+-- -..++|+..+.+.|..++..
T Consensus 333 --------G~~a~~~L~~~gI~~Nkn~iP~D~~~p~~~sGiRiGt~a~TtRG~~e~em~~ia~~I~~vl~~ 395 (422)
T PRK13034 333 --------GKQAEQALERAGITVNKNGIPFDPEKPFVTSGIRIGTPAGTTRGFGAAEFREIAGWILDVLDA 395 (422)
T ss_pred --------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf --------699999999839586678688999899889812667788983899889999999999999973
No 130
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=1e-07 Score=68.47 Aligned_cols=322 Identities=14% Similarity=0.044 Sum_probs=166.3
Q ss_pred CHHHHHHHHHHHCCCCCCCCHH--HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 9689999863210365328988--9999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVL--GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~--f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|+ |.+++..++-...|-+.. +..-..+..+.|.++.... ..+++| ..|||.++|+++.=.. ..+..++...+
T Consensus 59 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f-~~SGSEAvE~AlKlAr~~tgr~~ii~~~~ 135 (443)
T PRK08360 59 NPR-VVKAIKEQADKLIHASYIYAFPVEPLLLAEKLAEIAPID-NPKVSF-GLSGGDANDGAIKFARAYTKRRKILSYMR 135 (443)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCEEEE-ECCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 699-999999998636873577557648999999999857998-675997-48678899999999887629973874046
Q ss_pred CHHHHHHHHHHHCC---------C--CCEEEEECC------CCCCCC------HH----HCC---CCCCEEEEEEECCC-
Q ss_conf 36888887653238---------7--630674057------776578------67----678---55657997420242-
Q gi|254780153|r 100 SFGLGWMSDIRQLS---------L--QDVREFTAP------YGSLPD------FS----KVD---FDRDVVFVWNGTTS- 148 (391)
Q Consensus 100 ~~~~r~~~~~~~~~---------~--~~~~~~~~~------~g~~~~------~~----~~~---~~~~v~~~h~ETst- 148 (391)
+|-++.......-+ . .++..+..| ++..+. .+ .++ ....++.+-.|...
T Consensus 136 syHG~T~gals~tg~~~~~~~~~~~~~~~~~vp~p~~~r~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAviiEPvqG 215 (443)
T PRK08360 136 SYYGSTYGAMSLTGLDFEVRAIVGELSDVHYIPYPNCYRCPFGKEPGSCKMECVEYLKEKFEGEVYAEGVAALFAEPIQG 215 (443)
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf 65768601033137754545567899996681798643576788852136999999999986203668757999867678
Q ss_pred --CEEECC------EEEECCCCCCEEEEEECCH-HHHC--CC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHH
Q ss_conf --022032------0350256861488640110-1102--54--556857999700120017665154456778887654
Q gi|254780153|r 149 --GVCVPD------VGFIPESREGLVICDATSA-VFAR--HI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLE 215 (391)
Q Consensus 149 --Gv~~~~------~~~~~~~~~~llivD~vSs-~g~~--p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~ 215 (391)
|+..|. ...+|+++++++|+|=|.+ ||-. -+ +..++.=.+...-|+|++=-=++.++++++..+...
T Consensus 216 ~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~~G~Pisav~~~~ei~~~~~ 295 (443)
T PRK08360 216 DSGMVVPPENYFKKVKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLP 295 (443)
T ss_pred CCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 88418688899768988777659079851130387654405576457969865776344457888623111498985048
Q ss_pred HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 11445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r 216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN 295 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~ 295 (391)
....++|+.-- -....+..++|+.+++++ ..++.+++.+.+.+.+++..--.+
T Consensus 296 ----------------------~~~h~~T~~gn-pl~caaa~a~L~~i~~~~----l~~~~~~~G~~l~~~L~~l~~~~p 348 (443)
T PRK08360 296 ----------------------PLSHAFTLSGN-PTASRAALAVIEEIEEKD----LLKRAEKLGNYTKKRLEEMKEKHE 348 (443)
T ss_pred ----------------------CCCCCCCCCCC-HHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ----------------------87656687899-799999999999998635----999999999999999999887189
Q ss_pred CCCCCCCCCCCEEEEEE-CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 66882003653178982-47310113734567888999998886282872665567675056861588899999999999
Q gi|254780153|r 296 LAVDETTRSNTSICMKI-VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 296 ~~~~~~~rS~~~v~~~~-~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~a 374 (391)
.+.+-.-+..+. .+.+ .|........+ ..+.+...+.++|.++... .++.+|+.--=.++.+||+.+++.
T Consensus 349 ~i~dVRG~Gl~~-gie~v~d~~~~~~~~~----~~~~i~~~~~~~Glli~~~----~~~~i~~~PPL~it~~eid~~~~~ 419 (443)
T PRK08360 349 LIGDVRGLGLMI-GVDLVKDRETKERAYE----ETKKVVWRAFELGLIVTFF----QGNVLRIEPPLTIEEEVLDEGLDI 419 (443)
T ss_pred CEEEECCCCEEE-EEEEECCCCCCCCCHH----HHHHHHHHHHHCCCEEEEC----CCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 888520364699-9998127765544579----9999999999689388116----999899979912899999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780153|r 375 LRWVFYFQKI 384 (391)
Q Consensus 375 Le~~~~~~k~ 384 (391)
||.++.+...
T Consensus 420 l~~al~ev~~ 429 (443)
T PRK08360 420 LEEAIEDVEE 429 (443)
T ss_pred HHHHHHHHHH
T ss_conf 9999999985
No 131
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.19 E-value=7.3e-09 Score=75.73 Aligned_cols=305 Identities=16% Similarity=0.175 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEEE
Q ss_conf 8899999999999999968899857999748734899987532057897079970736888--88765323876306740
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREFT 121 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~~ 121 (391)
.+-.+.+++. |..|=+.. .+ ++.+||-+|..+++++++++|+.+++...-||.- .+.......+.+++.++
T Consensus 63 NPT~~~LE~~---la~LEgg~---~a-~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~~~~vd 135 (433)
T PRK08134 63 NPTTAVLEER---VAALEGGV---GA-IATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLPRFGIETTFVK 135 (433)
T ss_pred CHHHHHHHHH---HHHHCCCC---CE-EEECCHHHHHHHHHHHHCCCCCEEEECCCEECCHHHHHHHHHHHCCEEEEEEC
T ss_conf 8669999999---99980998---27-98538899999999974899998997188077379999987763483799988
Q ss_pred CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECCE-----EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf 57776578676785--56579974202420220320-----3502568614886401--101102545568579997001
Q gi|254780153|r 122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPDV-----GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ 192 (391)
Q Consensus 122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~~-----~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ 192 (391)
.. +++.++. .+...+++.||.+--.+.+. ..+++++++++|||-+ +-+...|++ .++|+++-|.-
T Consensus 136 ~~-----d~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~aia~iA~~~g~~~vVDNT~atP~~~~Pl~-~GaDivvhS~T 209 (433)
T PRK08134 136 PR-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFE-HGADLVYHSAT 209 (433)
T ss_pred CC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHH-HCCCEEEEECC
T ss_conf 97-----8467887559875289985389997503589999999975676199716651153058055-28988999654
Q ss_pred HCCCCCCCC--EEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH--------
Q ss_conf 200176651--544567788-876541144577831232001123210334786446664488999999998--------
Q gi|254780153|r 193 KVLGGEAGF--GIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL-------- 261 (391)
Q Consensus 193 K~l~~ppGl--~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~-------- 261 (391)
|-|+|-.-+ |+|+.+.+. |+.. ...|. +......+.+....+ -+.++.+.+.+....++
T Consensus 210 KYl~GHsDvlgG~vv~~~~~~w~~~------~~~~~---l~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~lr~~G~~lsp 279 (433)
T PRK08134 210 KFLGGHGTAIGGVLVDGGRFDWEAS------GKFPE---LTEPYAGFHGMVFDE-ESTVAAFLLRARREGLRDFGACLSP 279 (433)
T ss_pred EEECCCCCEEEEEEECCCCCCHHHC------CCCHH---HHCCHHHHCCCHHHH-HHCHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 6725887547789851652016550------44166---637615430404665-4047899999999987642766683
Q ss_pred ---H--HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CC-CCEEEEEECCCCCCCCCH
Q ss_conf ---6--2010318999999997799999998747971676-----688200--------36-531789824731011373
Q gi|254780153|r 262 ---W--LKKMGGLSACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RS-NTSICMKIVDSDIASLDI 322 (391)
Q Consensus 262 ---~--i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS-~~~v~~~~~d~~~~~~~~ 322 (391)
| +..-..+.-|.+||.+++..+-+|+++++..... ...|.+ .+ -.+++|.+....
T Consensus 280 ~da~L~lRGL~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~r~~~~G~Gg~~sf~l~g~~------ 353 (433)
T PRK08134 280 MNAWQLLQGIETLPLRMERHVANTRAVVEFLASHPAVERVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGR------ 353 (433)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCH------
T ss_conf 67799873677689999999987999999998589967898989899802999998789996589999996999------
Q ss_pred HHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------C-CEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 45678889999988862828726655676----------------------7-505686158889999999999999999
Q gi|254780153|r 323 NSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------P-LGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 323 ~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~-~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
+. ...+...|.--..+..+|+..+. + .-+|++++ .||++.|++-|+.|+
T Consensus 354 ~~----~~~f~~~l~lf~~a~SlGg~eSLi~~Pa~~th~~~~~e~~~~~Gi~~~lvRlSvG----lEd~eDLi~DL~qAL 425 (433)
T PRK08134 354 AA----GRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIG----LEDADDLIDDLKRAL 425 (433)
T ss_pred HH----HHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHH
T ss_conf 99----9999983881301226687530346763234635899999866989394999941----199999999999999
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780153|r 380 YFQKIS 385 (391)
Q Consensus 380 ~~~k~~ 385 (391)
+..|.+
T Consensus 426 ~aa~~~ 431 (433)
T PRK08134 426 KAAEKA 431 (433)
T ss_pred HHHHHC
T ss_conf 998874
No 132
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.19 E-value=3.7e-07 Score=64.86 Aligned_cols=322 Identities=12% Similarity=0.070 Sum_probs=175.5
Q ss_pred CCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCH----HHHHHHHHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHH
Q ss_conf 8998886888776-8968999986321036532898----899999999999999968899-857999748734899987
Q gi|254780153|r 10 KPKRPFFSSGPCA-KRPGWSLGILEGALLGRSHRCV----LGKERINKAIQLTRKVLEVPE-NYRIAIVPASDTGAVEMA 83 (391)
Q Consensus 10 ~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~sHRs~----~f~~i~~~~~~~l~~l~~~p~-~y~v~~l~GsgT~~~ea~ 83 (391)
.|+-.+|+-|=-. .+|..+++++.+.+-. +|..+ =..++-+.+.+-+++-++.+= ..+|++ +.|++.++..+
T Consensus 28 ~pDvI~l~~g~pdf~~p~~i~~a~~~~~~~-~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~I~i-t~G~~~al~~~ 105 (383)
T PRK06348 28 FPDIIDLSLGDPDLITDESIIQAAFEDAKK-GHTRYTDSTGDKELIEEIINYYKKDYNLSFKENEIMA-VVGACHGMYLA 105 (383)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEE-ECCHHHHHHHH
T ss_conf 999288999688999889999999999862-8998899868999999999999998789997674999-48989999999
Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-
Q ss_conf 5320578970799707368888876532387630674-057776578676785-----565799742024202203203-
Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG- 156 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~- 156 (391)
+..++.+||.+++..=.|..- ...+...+...+.+. ....+..++++.++. .+.+.++.=..-||...+..+
T Consensus 106 ~~~l~~pGD~Vlv~~P~Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~i~~~tk~iil~~P~NPTG~v~~~e~l 184 (383)
T PRK06348 106 LQSILDPGDEVIIHEPYFTPY-KDQVEMVGGKPIIFETYEEDGFQINVDKLEALITSKTKAIILNSPNNPTGAVFSKETL 184 (383)
T ss_pred HHHHCCCCCEEEEECCCCCHH-HHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf 999659999899806986026-9999980886253244566686579689898568787299989997988887777899
Q ss_pred ----EECCCCCCEEEEEECCHHHH--CC-CC---CC---CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCC
Q ss_conf ----50256861488640110110--25-45---56---857999700120017665--154456778887654114457
Q gi|254780153|r 157 ----FIPESREGLVICDATSAVFA--RH-ID---FN---KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSW 221 (391)
Q Consensus 157 ----~~~~~~~~llivD~vSs~g~--~p-~d---~~---~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~ 221 (391)
.+|..++..+|.|-+=+-.. .+ .. .. +--+.+.|.-|.++ -|| +|.++..+...+.....+
T Consensus 185 ~~l~~la~~~~i~visDEiY~~l~~~~~~~p~~~~~~~~~~~I~~~S~SK~~~-~~G~RiG~~i~p~~~~~~~~~~~--- 260 (383)
T PRK06348 185 EEIAKVAIENDLVIISDEVYDGFTFYEDFCPMASLAGMKERTITFGSFSKDFA-MTGWRIGYVIAPDYIINTMKNIN--- 260 (383)
T ss_pred HHHHHHHHHCCEEEEECCCHHHHCCCCCCCCHHHCCCCCCEEEEEECCHHHCC-CCCCEEEEEEECHHHHHHHHHHH---
T ss_conf 99997653068699851433442038999883222566651899921423115-88860799982799999999997---
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
..+...+|+..-++...+++.-. .-++.+.+..+++.+.+++.+.+.++.....++
T Consensus 261 --------------------~~~~~~~~~~~q~aa~~al~~~~--~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~p~-- 316 (383)
T PRK06348 261 --------------------EGICFSAPTISQRAAIYALKHRD--TIVPPIKEEFQKRMEYAYSRIESIPKLSLHPPK-- 316 (383)
T ss_pred --------------------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC--
T ss_conf --------------------31766687299999999985869--999999999999999999999748995761788--
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 036531789824731011373456788899999-8886282872665-5676750-5686158889999999999999
Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+..-+-+.++.... + ..++.. .+.+.|+++--|- +...|.+ +|++. ..+.+.++.-++-|+
T Consensus 317 --G~~y~w~~~~~~~~---~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRls~--~~~~~~l~ea~~Rl~ 380 (383)
T PRK06348 317 --GSIYAFINIKKTGL---S-------SVEFCEYLLKEAHVLVIPGKAFGKSGEGYIRLAC--TVGLEELEEAFNRIE 380 (383)
T ss_pred --EEEEEEEECCCCCC---C-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEE--ECCHHHHHHHHHHHH
T ss_conf --16799788999998---9-------9999999998689999785454889999799998--489999999999997
No 133
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.19 E-value=1e-07 Score=68.45 Aligned_cols=327 Identities=12% Similarity=0.065 Sum_probs=169.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCHH--HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCC-CE
Q ss_conf 9689999863210365328988--999999999999999688998579997487348999875320------5-789-70
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVL--GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYR-GV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~--f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~-~~ 93 (391)
+|+ |.+++.+++-...|-+.. ..+...+.-+.|.++. |++..-+|+..|||.++|+++-=. . .++ ..
T Consensus 76 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~LAe~L~~~~--p~~~~~v~f~~SGseA~E~AiKlAr~y~~~~g~~~r~~ 152 (462)
T PRK06916 76 VPE-LDEAIREQLNKIAHSTMLGLANVPSILLAEKLIEVV--PEGLKKVFYSDSGSSAVEIAIKMAFQYWQHKGKPKKQR 152 (462)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 699-999999998665685677767788999999999857--75548799549749999999999999999828887637
Q ss_pred EEEEECCHHHHHHHHHHHCC--------CC---CEEEEEC------CCCCCCC------HHHC-----CCCCCEEEEEEE
Q ss_conf 79970736888887653238--------76---3067405------7776578------6767-----855657997420
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLS--------LQ---DVREFTA------PYGSLPD------FSKV-----DFDRDVVFVWNG 145 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~--------~~---~~~~~~~------~~g~~~~------~~~~-----~~~~~v~~~h~E 145 (391)
++...++|=++-..-+.--+ .. ....... +.+..+. ++++ +....++.+-.|
T Consensus 153 ii~~~~syHG~T~ga~s~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~iAaviiE 232 (462)
T PRK06916 153 FVTLKEAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKEEIVKKHLEEMEELLKEKHEEIAAIIVE 232 (462)
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 99836885877520010467411357777878884676899755676789878999999999999997579976699996
Q ss_pred C-C---CCEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHH
Q ss_conf 2-4---2022032------035025686148864011011025---4--5568579997001200176-65154456778
Q gi|254780153|r 146 T-T---SGVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPA 209 (391)
Q Consensus 146 T-s---tGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~ 209 (391)
+ . .|+..+. ...+|+++++++|+|=|.+=.++- + +..++.=.+...-|+|++= .-++.++.+++
T Consensus 233 P~iqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~av~~~~~ 312 (462)
T PRK06916 233 PLMQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDILTAGKGLTGGYLPIAITVTTDE 312 (462)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHCHHCCCCCCCEEEEEEHHH
T ss_conf 14457899657878999999999860597267254302787556711664279668834312110378776279976189
Q ss_pred HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r 210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE 289 (391)
Q Consensus 210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~ 289 (391)
..+........ .. ....++|+. -+-....+..++|+.+++++ ..++.+++.+.+.+.++.
T Consensus 313 i~~~~~~~~~~--------~~-------~~~hg~T~~-GnPla~Aaa~a~L~~i~~e~----l~~~v~~~g~~l~~~L~~ 372 (462)
T PRK06916 313 IYNAFLGDYEE--------QK-------TFFHGHSYT-GNPLGCAVAIANLELYEKTN----LIEQVARKTEYVATQLED 372 (462)
T ss_pred HHHHHCCCCCC--------CC-------CCCCCCCCC-CCHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHH
T ss_conf 88753166545--------66-------655677788-88799999999999999668----899999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCEEE-EE-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 79716766882003653178-98-24731011373456788899999888628287266556767505686158889999
Q gi|254780153|r 290 NDWIENLAVDETTRSNTSIC-MK-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED 367 (391)
Q Consensus 290 ~~~~~~~~~~~~~rS~~~v~-~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d 367 (391)
+.- .+.+.+ .|...... +. +.++.... ..+........+...+.+.|.++.. .++.+|+.--=.++.++
T Consensus 373 l~~-~~~v~d--VRG~Gl~~gielv~~~~~~~-~~~~~~~~~~~i~~~~~~~Gll~~~-----~gn~i~~~PPL~it~~e 443 (462)
T PRK06916 373 LFA-LKHVGD--IRQLGLMVGIELVKNKETKE-PFPWTERVGVQVCKRSRELGMILRP-----LGNTIVFMPPLASTIDE 443 (462)
T ss_pred HHC-CCCEEE--EECCCCEEEEEEECCCCCCC-CCCHHHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHHH
T ss_conf 626-998587--72477189999832665467-7855789999999999969949974-----49999998993488999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780153|r 368 LLLLCDWLRWVFYFQ 382 (391)
Q Consensus 368 v~~L~~aLe~~~~~~ 382 (391)
|+.+++.|+.++.++
T Consensus 444 id~~~~il~~al~ev 458 (462)
T PRK06916 444 LDEMLRILYKAISDV 458 (462)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 134
>PRK09044 consensus
Probab=99.19 E-value=1.4e-07 Score=67.63 Aligned_cols=314 Identities=14% Similarity=0.051 Sum_probs=167.8
Q ss_pred CHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCC-CE
Q ss_conf 9689999863210365328--9889999999999999996889985799974873489998753205-------789-70
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHR--CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYR-GV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~-~~ 93 (391)
+|+ |.+++.+++=...|- +.-..+...+.-+.|.+++ |.+..-+++..|||.++|+++.=.. .++ ..
T Consensus 60 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~la~~L~~~~--p~~l~~v~f~~SGsEAvE~AiKlA~~y~~~r~~tgr~~ 136 (418)
T PRK09044 60 HPH-IAEAVREQLDRMPHVMFGGLAHEPAYRLASRLAAIL--PGDLERVFFSDSGSVAVEVAMKMAVQYWLNRGERGRTK 136 (418)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 899-999999999758883458746779999999999857--88758698628678999999999999998624567762
Q ss_pred EEEEECCHHHHHHHHHHHCCCC------------CEEEEECCCCCCCCHHHC-----CCCCCEEEEEEEC-CC---CEEE
Q ss_conf 7997073688888765323876------------306740577765786767-----8556579974202-42---0220
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQ------------DVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGT-TS---GVCV 152 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~------------~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ET-st---Gv~~ 152 (391)
++...++|=++......-.+.. .......|. .....+.+ .....++.+-.|. .. |+..
T Consensus 137 ii~~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~p~~~~~~~p~-~~~~~~~l~~~~~~~~~~iAavi~EP~iqg~gG~~~ 215 (418)
T PRK09044 137 FLAFRGGYHGDTLATMAVCDPEEGMHSLFAGVLPEQVIADLPR-DAASEAALDALLERHGGEIAAILVEPLVQGAGGMLF 215 (418)
T ss_pred EEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCC-CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
T ss_conf 8996187778666662115775576677789899761457999-867899999999757997789999466357898748
Q ss_pred CC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCC
Q ss_conf 32------035025686148864011011025---4--5568579997001200176-6515445677888765411445
Q gi|254780153|r 153 PD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPS 220 (391)
Q Consensus 153 ~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~ 220 (391)
+. .+.+|.++++++|+|=|.+=.++- + +..++.=.+...-|+|++= -=++.++.+++..+....-.+.
T Consensus 216 ~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Plsav~~~~~i~~~~~~~~~~ 295 (418)
T PRK09044 216 HDPEVLRRLRRLADRHGLLLIFDEIFTGFGRTGTMFAFEQAGVVPDIVTLSKALTGGTLPLAATVASRRVFEAFWSDDPG 295 (418)
T ss_pred CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEECHHCCCCCCCCEEEEECHHHHHHHHCCCCC
T ss_conf 98899999999998749867721220368766785323325958872430200148877610235539999975037987
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~ 300 (391)
. ....++|+.--|+ ...+..++|+.+++++ ..++.+++.+.+.+.++.... .+.+.+
T Consensus 296 ~----------------~~~hg~T~~gnpl-~cAaala~L~~i~~~~----l~~~~~~~g~~l~~~L~~~~~-~~~v~~- 352 (418)
T PRK09044 296 H----------------ALMHGPTYMGNPL-ACAAANASLDLFEDEP----RLEQVAAIEAQLRAGLEPCRD-LPGVVD- 352 (418)
T ss_pred C----------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHCC-CCCEEE-
T ss_conf 5----------------5021788889989-9999999999997347----999999999999999997536-997798-
Q ss_pred CCCCCCE-EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 0036531-789824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 301 TTRSNTS-ICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 301 ~~rS~~~-v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.|.... ..+.+.++.. ...+...+.++|+.+.. .++.+|+.---.++.+|++.++++|+.++
T Consensus 353 -VRG~Glm~~iel~~~~~-----------~~~~~~~~~~~Gv~v~~-----~gn~irl~PpL~it~~eid~~~~~l~~~l 415 (418)
T PRK09044 353 -VRVLGAIGVVELERIPP-----------LDDLRARFVDRGVWIRP-----FRNIVYLTPAFTIAEDDLARLTAAIRQVV 415 (418)
T ss_pred -EEECCEEEEEEECCCCC-----------HHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf -80055799999368576-----------99999999978977974-----59999997995789999999999999998
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 380 YF 381 (391)
Q Consensus 380 ~~ 381 (391)
.+
T Consensus 416 ~E 417 (418)
T PRK09044 416 AE 417 (418)
T ss_pred HC
T ss_conf 57
No 135
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.19 E-value=1.4e-07 Score=67.51 Aligned_cols=320 Identities=12% Similarity=0.098 Sum_probs=164.9
Q ss_pred CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCC-CE
Q ss_conf 96899998632103653289--88999999999999999688998579997487348999875320------5-789-70
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYR-GV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~-~~ 93 (391)
+|+ |.+++..++=...|-+ .-..+...+.-+.|.+++. .+..-+|+..||+.++|+++.=- - .++ ..
T Consensus 71 ~p~-v~~Ai~~Ql~~l~~~~~~~~~~~~~~~lae~L~~~~p--~~l~~v~f~~SGSEA~E~AiKlA~~~~~~rg~~~r~~ 147 (452)
T PRK06943 71 NPR-INAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTG--HTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKRE 147 (452)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 699-9999999986574713577687699999999997466--6557599608718999999999999998618998605
Q ss_pred EEEEECCHHHHHHHHHHHCCC-----------CCEEEEECC------CCCCCC------HHHC-----CCCCCEEEEEEE
Q ss_conf 799707368888876532387-----------630674057------776578------6767-----855657997420
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSL-----------QDVREFTAP------YGSLPD------FSKV-----DFDRDVVFVWNG 145 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~~~------~g~~~~------~~~~-----~~~~~v~~~h~E 145 (391)
++...++|-++-..-..--+. ..+.....| .++... ++++ +....++.+-.|
T Consensus 148 ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~iAAvivE 227 (452)
T PRK06943 148 FVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVE 227 (452)
T ss_pred EEECCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 87347886887630146268512033567767776245899755678888777899999999999998569977899995
Q ss_pred C----CCCEEECC------EEEECCCCCCEEEEEECCHHHHCC---CC--CCCC--EEEEECCHHCCCCC-CCCEEEEEC
Q ss_conf 2----42022032------035025686148864011011025---45--5685--79997001200176-651544567
Q gi|254780153|r 146 T----TSGVCVPD------VGFIPESREGLVICDATSAVFARH---ID--FNKL--DVVTFSAQKVLGGE-AGFGIIILS 207 (391)
Q Consensus 146 T----stGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~d--~~~i--Dv~~a~sQK~l~~p-pGl~~v~~s 207 (391)
. +.|+..+. ...+|+++++|+|+|=|.+=.++- +- ..++ |++ ..-|+|++= .=++.++.+
T Consensus 228 P~iqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDii--t~gKgl~gG~~Plsav~~~ 305 (452)
T PRK06943 228 PLVQCAAGMAMHDPSYVRGLRALCDEYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL--CLSKGISGGYLPLSLVLSR 305 (452)
T ss_pred CCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE--EECCHHHCCCCCCCEEEEC
T ss_conf 75146796185889999999999864496487133202886451771023469988299--9765212898653124303
Q ss_pred HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r 208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI 287 (391)
Q Consensus 208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i 287 (391)
++..+....-.... ....++|+ +-+-....+..++|+.+++++ ..+|.+++.+.+++.+
T Consensus 306 ~ei~~~~~~~~~~~----------------~~~h~~T~-~GnplacAaala~L~~l~~e~----l~~~~~~~g~~l~~~L 364 (452)
T PRK06943 306 DEIFDAFYDDDTTR----------------GFLHSHSY-TGNPLACRAAVATLDLFARDD----VLARNARKSALLRAAL 364 (452)
T ss_pred HHHHHHHCCCCCCC----------------CCCCCCCC-CCCHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf 88998643799767----------------86757788-988899999999999998657----9999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf 747971676688200365317-8982473101137345678889999988862828726655676750568615888999
Q gi|254780153|r 288 QENDWIENLAVDETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKE 366 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~ 366 (391)
..+. -.+.+.+ .|..... .+.+..+.. ....+.+.+.....++|.++.. .|..+|+.--=.++.+
T Consensus 365 ~~l~-~~~~V~d--VRG~GL~~gvel~~~~~------~~~~~~~~i~~~~~~~Gll~~~-----~g~~i~l~PPL~it~~ 430 (452)
T PRK06943 365 APLA-AHPQVRH--LRQRGTIFAFDVALDGD------AARTFSRRFFEHALERELLLRP-----IGTTVYLMPPYVLDDE 430 (452)
T ss_pred HHHH-CCCCEEE--EEECCEEEEEEECCCCC------CCHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHH
T ss_conf 9873-5998888--63075899999667876------4579999999999969928986-----4999999799038899
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999
Q gi|254780153|r 367 DLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 367 dv~~L~~aLe~~~~~~k 383 (391)
+++.+++.|+.++.+.=
T Consensus 431 eid~~~~~L~~aL~~v~ 447 (452)
T PRK06943 431 EIAWLAQRTRATLDATL 447 (452)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999
No 136
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.19 E-value=5e-09 Score=76.76 Aligned_cols=304 Identities=18% Similarity=0.133 Sum_probs=166.5
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-...+++. |..|-+... . +..+||-+|+.+++++++++|+.+++...-||. ++........+.+++.+
T Consensus 67 gNPT~~~LE~~---la~LEg~~~---a-~~~sSGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~fv 139 (436)
T PRK07812 67 MNPTQDVVEQR---IAALEGGVA---A-LFLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFV 139 (436)
T ss_pred CCHHHHHHHHH---HHHHHCCCC---E-EEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 88669999999---999829987---8-9964799999999999618898899948866878999999976528741696
Q ss_pred ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEECC---EE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 05777657867678--55657997420242022032---03--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVPD---VG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~~---~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.+ .+++.++ ..+...+++.||.+--.+.+ .. .+++.+++++|||-+ |-+...|++. ++|+++-|.
T Consensus 140 ~d~----~d~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivihS~ 214 (436)
T PRK07812 140 EDP----DDLDSWRAAVRPNTKAFFAETISNPQIDILDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEH-GADIVVHSA 214 (436)
T ss_pred CCC----CCHHHHHHHCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC-CCCEEEEEC
T ss_conf 799----889999974586743999964899860523669999999985992996268646230376414-898899964
Q ss_pred HHCCCCCCCC--EEEEECHH-HHHHH--HHCCCCCCCCCHH--HCCHH--------HHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 1200176651--54456778-88765--4114457783123--20011--------232103347864466644889999
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPA-SVERL--EKYVPSWPLPKIF--RMVKG--------GRVMEGLFCGETINTPSLLCIEDY 256 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~-al~~~--~~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~~~~TP~v~~i~al 256 (391)
-|-|+|-.-+ |+|+.+.+ -|.+. ..... +.+.+. .|... .+.......|. +++-+.-|.+
T Consensus 215 TKyi~GHsDvlgG~vv~~~~~~w~~~r~~~~~~--~d~~~~~~~~~~l~~~~~~~~~r~~~~r~~G~---~lsP~da~L~ 289 (436)
T PRK07812 215 TKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTT--PDPSYHGVVFAELGPPAYALKARVQLLRDLGS---AASPFNAFLI 289 (436)
T ss_pred CEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC--CCHHHHCCHHHHCCCHHHHHHHHHHHHHHCCC---CCCCHHHHHH
T ss_conf 503158977043699845755400023656577--87576141576415488999999999864111---3580777898
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------------C-CC-CCEEEEEECCCCCCCCC
Q ss_conf 999986201031899999999779999999874797167668820-------------0-36-53178982473101137
Q gi|254780153|r 257 IDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET-------------T-RS-NTSICMKIVDSDIASLD 321 (391)
Q Consensus 257 ~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~-------------~-rS-~~~v~~~~~d~~~~~~~ 321 (391)
... -..+.-|.+||.+++..+-+|+++++..... ..|. . ++ -.++.|.+....
T Consensus 290 lRG------L~TL~lRm~r~~~nA~~iA~~L~~hp~V~~V-~yPgL~shp~h~la~~~~~~G~G~~~sf~l~g~~----- 357 (436)
T PRK07812 290 AQG------LETLSLRIERHVANAQRVAEFLAARDDVLSV-NYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGV----- 357 (436)
T ss_pred HCC------CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCH-----
T ss_conf 736------6838999999999999999999609996689-8989888838899998689997279999980989-----
Q ss_pred HHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 345678889999988862828726655676----------------------75-0568615888999999999999999
Q gi|254780153|r 322 INSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 322 ~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
+ ..+.+...|.--..+..+|+..+. .. -+|++++ .||++.|++-|+.|
T Consensus 358 -~----~~~~f~~~L~lf~~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~eDLi~DL~qA 428 (436)
T PRK07812 358 -E----AGKAFVNALTLHSHVANIGDVRSLVIHPASTTHAQLTPEEQLATGVTPGLVRLAVG----IEGIDDILADLEAG 428 (436)
T ss_pred -H----HHHHHHHCCCCCCEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHH
T ss_conf -9----99999980895501047773661546775456432899999865989495999951----09999999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780153|r 379 FYFQKI 384 (391)
Q Consensus 379 ~~~~k~ 384 (391)
|+..|+
T Consensus 429 L~aa~a 434 (436)
T PRK07812 429 FAAARA 434 (436)
T ss_pred HHHHHC
T ss_conf 997131
No 137
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.18 E-value=1.7e-07 Score=67.02 Aligned_cols=297 Identities=16% Similarity=0.078 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCCHHHHHHHHHHC-CCCCCE
Q ss_conf 68999986321036--532898899999999999999968--------8998579997487348999875320-578970
Q gi|254780153|r 25 PGWSLGILEGALLG--RSHRCVLGKERINKAIQLTRKVLE--------VPENYRIAIVPASDTGAVEMALWSL-LGYRGV 93 (391)
Q Consensus 25 p~~v~~~~~~~~l~--~sHRs~~f~~i~~~~~~~l~~l~~--------~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~ 93 (391)
|..+.+++...+-. ..||-|+- -..+.++.|.+.++ ++. +.+++..|++..+..++.-. ..+++.
T Consensus 40 p~~v~eai~~~~~~~~~~~rYPd~--~~~~Lr~aiA~~~~~~~~~~~~v~~--e~I~vgnGs~eli~~l~~a~~~~~~~~ 115 (369)
T PRK02610 40 PTDLKQKLAWLYQQGIASNRYPDG--GHLALKQAIAEYVNESTAGSWQITP--ANISVGNGSDELIRSLLIATCLGGEGS 115 (369)
T ss_pred CHHHHHHHHHHHHCCHHCCCCCCC--CHHHHHHHHHHHHCCCCCCCCCCCC--CEEEECCCHHHHHHHHHHHHHCCCCCE
T ss_conf 989999999998703120659999--8799999999885755455568981--569984899999999999995489985
Q ss_pred EEEEECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHC----CC-----CCCEEEEEEECCCCEEECCEEE--E-CC
Q ss_conf 7997073688888765323876306740-577765786767----85-----5657997420242022032035--0-25
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKV----DF-----DRDVVFVWNGTTSGVCVPDVGF--I-PE 160 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~----~~-----~~~v~~~h~ETstGv~~~~~~~--~-~~ 160 (391)
+++..-+|+.. ..+++..+..+..+. .+.+...+++.. .. .+.+.++.=..-||...+..++ + ..
T Consensus 116 vl~~~Ptf~~Y--~~~a~~~g~~~~~v~~~~~~f~~d~~~~~~~i~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~l~~~ 193 (369)
T PRK02610 116 ILVAEPTFSMY--GILAQTLGIPVVRVGRDPENFEIDLAAAQTAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSL 193 (369)
T ss_pred EEECCCCHHHH--HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHC
T ss_conf 99678765589--9999975962799457643665698999999985559882399978996972656799999999846
Q ss_pred CCCCEEEEEECCH-HHHCCC-C-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 6861488640110-110254-5-56857--9997001200176651--54456778887654114457783123200112
Q gi|254780153|r 161 SREGLVICDATSA-VFARHI-D-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 161 ~~~~llivD~vSs-~g~~p~-d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
..+.++|+|-.-. |..... + ..+.+ ++.-+.-|.+| -||+ |.++.+++.++...+...
T Consensus 194 ~~~~~vvvDEaY~ef~~~s~~~~~~~~~NlivlrTfSK~~g-laGlRlGy~ia~~~~i~~l~~~~~-------------- 258 (369)
T PRK02610 194 PEDILVVIDEAYFEFSQTTLVPELAQHPNWVILRTFSKAFR-LAAHRVGYAIGHPELIAVLEKVRL-------------- 258 (369)
T ss_pred CCCEEEEECCCEEECCCCCCCHHHHCCCCEEEEECCCHHHC-CCCCCCEECCCCHHHHHHHHHHCC--------------
T ss_conf 99769983367602155532102431787589852634406-766551311179999999998249--------------
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EE
Q ss_conf 32103347864466644889999999986201031899999999779999999874797167668820036531789-82
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KI 312 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~ 312 (391)
++.-+.+...+...+|+.- .-+....++..+..+.++..+.+.+++..+ -|.+|..+ ++
T Consensus 259 -----------p~~v~~~a~~aa~~aL~~~---~~~~~~~~~~~~eR~~l~~~L~~l~g~~v~------ps~aNFil~~~ 318 (369)
T PRK02610 259 -----------PYNLPSFSQAAAQLALEHR---DELLAAIPEILQERDKLYRALQELPQLRVW------PSAANFLFLRL 318 (369)
T ss_pred -----------CCCCCHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCEEC------CCCCEEEEEEC
T ss_conf -----------9884899999999997694---999999999999999999999867997789------99860899988
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r 313 VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 313 ~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.++. ..+.+...|.+.|+.+. ....++||+++ ++++.+.|+++|+.++.+
T Consensus 319 ~~~~-----------~~~~~~~~L~~~Gi~VR-----~~~~~lRIsvg---t~een~~~l~~Lk~~L~~ 368 (369)
T PRK02610 319 QGAQ-----------DLAALHQALKNQGTLVR-----HTAGGLRITIG---TPEENQRTLARLQAALTQ 368 (369)
T ss_pred CCCC-----------CHHHHHHHHHCCCEEEC-----CCCCEEEEEEC---CHHHHHHHHHHHHHHHHH
T ss_conf 9975-----------69999999982990999-----89990899949---999999999999999961
No 138
>PRK09148 aminotransferase; Validated
Probab=99.18 E-value=1.5e-07 Score=67.37 Aligned_cols=332 Identities=10% Similarity=0.011 Sum_probs=178.9
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHHHHHH
Q ss_conf 8868887768-968999986321036-5328---9889999999999999996889985--7999748734899987532
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea~~~n 86 (391)
.+|+-|=-.. +|..+++++.+.+.. ..|+ +.=..++-+.+-+.+++-+++.-+. +| +++.|++.++..++..
T Consensus 34 i~L~iG~Pd~~~P~~i~~a~~~a~~~~~~~~Y~~~~G~p~LReaia~~~~~r~g~~~~p~~~I-ivt~Ga~~al~~~~~a 112 (406)
T PRK09148 34 IDLGMGNPDLPTPQHIVDKLCETAGKPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQV-VATLGSKEGFANMAQA 112 (406)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHH
T ss_conf 889898999997899999999997499888789975859999999999999858988988739-9887989999999999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEE---
Q ss_conf 0578970799707368888876532387630674--0577765786767-----85565799742024202203203---
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~--- 156 (391)
++++||.+++-.=.|.... ...+..+..+..+ ..+.+...++++. +..+.+.++.=..-||...+..+
T Consensus 113 l~~pGD~Vli~~P~Yp~y~--~~~~~~g~~~~~v~~~~~~~~~~~le~~~~~~~~ktk~iil~~P~NPTG~v~~~~~l~~ 190 (406)
T PRK09148 113 ITAPGDVVLCPNPSYPIHA--FGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKD 190 (406)
T ss_pred HCCCCCEEEECCCCHHHHH--HHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 6699999998077658789--99998179158605776433330299999745876449997789998887689999999
Q ss_pred --EECCCCCCEEEEEECCH---HHHCCC------C-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCC
Q ss_conf --50256861488640110---110254------5-56857999700120017665--1544567788876541144577
Q gi|254780153|r 157 --FIPESREGLVICDATSA---VFARHI------D-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 157 --~~~~~~~~llivD~vSs---~g~~p~------d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~ 222 (391)
.+|..++.++|.|-+=+ +.+.+. + ..+.-+.+.|.-|.++ .|| +|.++..++.++++...+.
T Consensus 191 l~~~a~~~~i~visDEiY~~l~~~~~~~~s~~~~~~~~~~~I~~~s~SK~~~-m~G~RiG~~v~~~~li~~l~~~~~--- 266 (406)
T PRK09148 191 LVAFAKKHDIWILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFS-MAGWRMGFAVGNERLIAALTRVKS--- 266 (406)
T ss_pred HHHHHHCCEEEEECCCCHHHHEECCCCCCCHHHCCCHHHHHHHHCCCCHHCC-CCCCCEEEEECCHHHHHHHHHHHH---
T ss_conf 9987540548996342253513788767554317430322111114203036-755335999759999999999997---
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
+ +-...++..-++...+|+.-. .-++.+.+.++++.+.+.+.+.+.+ +....++-.
T Consensus 267 ---------~-----------~~~~~~~~~Q~aa~~aL~~~~--~~~~~~~~~y~~rrd~l~~~L~~~g-~~~~~P~G~- 322 (406)
T PRK09148 267 ---------Y-----------LDYGAFTPIQVAATAALNGPQ--DCIAEMREVYKKRRDVLVESFGRAG-WDIPPPAAS- 322 (406)
T ss_pred ---------H-----------CCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCEE-
T ss_conf ---------6-----------437887899999999975967--8999999999999999999888669-764379836-
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 3653178982473101137345678889999988-86282872665-5676750-5686158889999999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.-+-+.+++. ....+ ..++...| .+.|+++--|. +...|++ +|++.-. +.+.++.-++-|+.++
T Consensus 323 ---~y~w~~l~~~-~~~~~-------~~~f~~~Ll~~~gV~v~PG~~Fg~~g~~~iRlsfa~--~~~~L~eal~Rl~~~l 389 (406)
T PRK09148 323 ---MFAWAPIPEA-FRHLG-------SLEFSKLLVEKADVAVAPGVGFGEHGEGYVRIALVE--NEQRIRQAARNIKRFL 389 (406)
T ss_pred ---EEEEEECCCC-CCCCC-------HHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEECC--CHHHHHHHHHHHHHHH
T ss_conf ---9999888643-47899-------999999999739999989732188998859999738--8999999999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999987751
Q gi|254780153|r 380 YFQKISFLRA 389 (391)
Q Consensus 380 ~~~k~~~~~~ 389 (391)
.+.-+.+..-
T Consensus 390 ~~~~~~~~~~ 399 (406)
T PRK09148 390 SSADETLHNV 399 (406)
T ss_pred HCCHHHHHCC
T ss_conf 7608787376
No 139
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.18 E-value=1.7e-07 Score=67.09 Aligned_cols=321 Identities=14% Similarity=0.036 Sum_probs=171.6
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHHH
Q ss_conf 999863210365328988999999999999999688998579997487348999875320-5789707997073688888
Q gi|254780153|r 28 SLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGWM 106 (391)
Q Consensus 28 v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~~ 106 (391)
|.+.+....+.. + ...++-.+.++++++.+. ++. ..|||.|.+.++..+ +++||.+++-.-.|-.- +
T Consensus 20 v~~~l~sg~~~~---G----~~v~~FE~~~a~~~g~k~---av~-v~sgT~AL~lal~al~i~~gdeVi~p~~tf~at-~ 87 (379)
T PRK11658 20 VKEVLRSGWITT---G----PKNQELEQAFCQLTGNQH---AIA-VSSATAGMHITLMALGIGPGDEVITPSQTWVST-L 87 (379)
T ss_pred HHHHHHCCCCCC---C----HHHHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHH-H
T ss_conf 999996698678---8----779999999999978694---999-768899999999986988839999899556999-9
Q ss_pred HHHHHCCCCCEEEEE-CCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCE--EEECCCCCCEEEEEECCHHHHC-
Q ss_conf 765323876306740-5777657867678-----556579974202420220320--3502568614886401101102-
Q gi|254780153|r 107 SDIRQLSLQDVREFT-APYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDV--GFIPESREGLVICDATSAVFAR- 177 (391)
Q Consensus 107 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~--~~~~~~~~~llivD~vSs~g~~- 177 (391)
..+...+ ......+ .+.+...+++.++ ..+.+..||. -|...+.. ..+|+.++..+|-||..++|+.
T Consensus 88 ~ai~~~G-a~pvf~Did~~t~~id~~~~e~~it~~tkaIi~Vh~---~G~~~d~~~i~~i~~~~~i~vIEDaA~a~Ga~~ 163 (379)
T PRK11658 88 NMIVLLG-ATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVHY---AGAPADLDAIRAIGERYGIPVIEDAAHAVGTYY 163 (379)
T ss_pred HHHHHCC-CEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECC---CCCCCCHHHHHHHHHHCCCEEEECCHHHHCCCC
T ss_conf 9999819-989974574565354889998654826549998568---898663779999999759818970835536654
Q ss_pred ---CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC-C-CCCCCCCCCCCHHH
Q ss_conf ---545568579997001200176651544567788876541144577831232001123210-3-34786446664488
Q gi|254780153|r 178 ---HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME-G-LFCGETINTPSLLC 252 (391)
Q Consensus 178 ---p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~TP~v~~ 252 (391)
++--.++.+.-+.+.|+|..--|=.++.=+++..+++......+...+.++......... . ...|. -+-.+-..
T Consensus 164 ~g~~~Gs~g~a~fSF~~~K~ittGeGG~ivtnd~~l~~~~r~lr~hG~~~~~~~~~~~g~~~~~~~~~~G~-N~rm~elq 242 (379)
T PRK11658 164 KGRHIGARGTAIFSFHAIKNITCAEGGLIVTDDEELADRLRMLKFHGLGVDAYDRQTQGRAPQAEVLEPGY-KYNLADIN 242 (379)
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEECCC-CCCCCHHH
T ss_conf 79866762445785666667877787499969999999999999779886513443037888622665561-36777787
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 999999998620103189999999977999999987479716766882003-6531789824731011373456788899
Q gi|254780153|r 253 IEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR-SNTSICMKIVDSDIASLDINSQKSFCKS 331 (391)
Q Consensus 253 i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r-S~~~v~~~~~d~~~~~~~~~~~~~~~~~ 331 (391)
-.....+|+. ++.+.++.++.++...+.+...++.....++.... +.-..++.+.... ...+ ...
T Consensus 243 AAigl~qL~~------ld~~~~~R~~ia~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~-------Rd~ 308 (379)
T PRK11658 243 AAIALVQLQK------LEALNARRRAIAAQYLQALAALPFQPLSLPAWPHQHAWHLFIIRVDEER-CGIS-------RDA 308 (379)
T ss_pred HHHHHHHHHH------HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECHHH-CCCC-------HHH
T ss_conf 9999999999------9999999999999999972689986667889887411078999986463-5448-------999
Q ss_pred HHHHHHHCCEEECCCC--------CCC------C-------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9998886282872665--------567------6-------7505686158889999999999999999
Q gi|254780153|r 332 MLSFLEKEEIAYDIGS--------YRD------A-------PLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 332 ~~~~l~~~g~~~~~~~--------~r~------~-------~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
+...|.++|+..++.. |+. . .+.+.+-++..++.+|++..++.|..++
T Consensus 309 l~~~L~~~gI~t~~~y~p~h~~~~~~~~~~~~~lpnae~~~~~~lsLP~~~~Lt~~di~~Ii~~ik~i~ 377 (379)
T PRK11658 309 LMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDSDVDRVITALQQIA 377 (379)
T ss_pred HHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 999999779981202742004898881598789989999984889898998979999999999999997
No 140
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.18 E-value=2.2e-07 Score=66.36 Aligned_cols=299 Identities=18% Similarity=0.147 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391)
|..+.+++....= ..||=|+- -..+.++.+...++..+...|++.. |++..++.++..++.+|+.+++..-.|+..
T Consensus 37 ~~~~~~~~~~~~~-~~~rYPd~--~~~~l~~a~a~~~~~~~~~~V~~gn-Gsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y 112 (356)
T COG0079 37 PPKVIEAIRAALD-KLNRYPDP--DYRELRAALAEYYGVVDPENVLVGN-GSDELIELLVRAFVEPGDTVLIPEPTFSMY 112 (356)
T ss_pred CHHHHHHHHHHHH-HHHCCCCC--CHHHHHHHHHHHHCCCCCCEEEEEC-CHHHHHHHHHHHHHCCCCEEEECCCCHHHH
T ss_conf 8999999998788-86429996--1799999999984799802399827-848999999999617898599817880788
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCHHHC----CC-CCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEEC-CHH
Q ss_conf 88765323876306740577765786767----85-5657997420242022032035---025-68614886401-101
Q gi|254780153|r 105 WMSDIRQLSLQDVREFTAPYGSLPDFSKV----DF-DRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDAT-SAV 174 (391)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~-~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~v-Ss~ 174 (391)
...++..+..+....... ...+++.+ +. .+.+.+|.=..-||...+..++ +.. ..+.++|||-. -.|
T Consensus 113 --~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF 189 (356)
T COG0079 113 --EIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEF 189 (356)
T ss_pred --HHHHHHCCCEEEEECCCC-CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf --999997698699944644-44588999865146888899959959988876999999999838788589997753102
Q ss_pred HHCCC-CC-CCCE-EEE-ECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 10254-55-6857-999-7001200176651--54456778887654114457783123200112321033478644666
Q gi|254780153|r 175 FARHI-DF-NKLD-VVT-FSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP 248 (391)
Q Consensus 175 g~~p~-d~-~~iD-v~~-a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP 248 (391)
...+. +. ...+ +++ =+--|.+|. ||+ |+++.+++.++...+...++ .-
T Consensus 190 ~~~~~~~l~~~~~nlivlRTfSKa~gL-AGlRlGy~ia~~~~i~~l~~vr~p~-------------------------~v 243 (356)
T COG0079 190 SPESSLELLKYPPNLIVLRTFSKAFGL-AGLRVGYAIANPELIAALNKVRPPF-------------------------NV 243 (356)
T ss_pred CCCHHHHHHCCCCCEEEEECCHHHHCC-CHHCEEEHCCCHHHHHHHHHHCCCC-------------------------CC
T ss_conf 782454552148988999546786402-1133340208999999999830788-------------------------88
Q ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEEEE-CCCCCCCCCHHHHH
Q ss_conf 4488999999998620103189999999977999999987479716-766882003653178982-47310113734567
Q gi|254780153|r 249 SLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE-NLAVDETTRSNTSICMKI-VDSDIASLDINSQK 326 (391)
Q Consensus 249 ~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~-~~~~~~~~rS~~~v~~~~-~d~~~~~~~~~~~~ 326 (391)
+.....+...+|+.- .=++...++..+-++.+++++.+.+ +. .+ -|.+|..+.- ++ .
T Consensus 244 ~~~a~~aa~aal~~~---~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~------pS~aNFvlv~~~~-----------~ 302 (356)
T COG0079 244 SSPALAAAIAALRDA---DYLEESVERIREERERLYAALKALG-LFGVF------PSQANFVLVRVPD-----------A 302 (356)
T ss_pred CHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CCCCC------CCCCCEEEEECCC-----------C
T ss_conf 899999999860248---9999999999999999999997379-87015------5888779997586-----------2
Q ss_pred HHHHHHHHHHHHCCEEECCCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8889999988862828726655-676750568615888999999999999999999
Q gi|254780153|r 327 SFCKSMLSFLEKEEIAYDIGSY-RDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 327 ~~~~~~~~~l~~~g~~~~~~~~-r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
. ...+.+.|.++|+++.--.. ......+||+.+. +++-++|+++|..+.+.
T Consensus 303 ~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvgt---~een~~ll~AL~~~~~~ 354 (356)
T COG0079 303 E-AAALAEALLKKGILVRDCSSVGLLPGYLRITVGT---PEENDRLLAALREVLKG 354 (356)
T ss_pred C-HHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCC---HHHHHHHHHHHHHHHHC
T ss_conf 1-9999999987898998577778888759996598---89999999999998731
No 141
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.18 E-value=2.4e-08 Score=72.46 Aligned_cols=307 Identities=15% Similarity=0.100 Sum_probs=158.3
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..|=+.. .+ +..+||-+|+.+++++++++|+.+++...-||.- ++.......+.+++.+
T Consensus 59 gNPT~~~lE~~l---a~LEgg~---~a-~~~sSGmaAi~~~ll~ll~~Gd~iv~~~~~YGgT~~l~~~~l~~~GI~v~~v 131 (432)
T PRK06702 59 GNPTLAAFEQKL---AELEGGV---GA-VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFF 131 (432)
T ss_pred CCHHHHHHHHHH---HHHHCCC---CE-EEECHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHEECCCEEEEEE
T ss_conf 986799999999---9983998---28-9853289999999999628999899848871217999864020288799987
Q ss_pred ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 05777657867678--5565799742024202203---203--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+... +.+++. ......+++.||.+--... +.. .+++++++++|||-+ +-+...|++. ++|+++-|.
T Consensus 132 d~~~----~~~~~~~~~~~~Tkli~~EtpsNP~l~v~Di~~ia~iA~~~gi~~vVDNTfatP~~~rPl~~-GaDiVvhS~ 206 (432)
T PRK06702 132 NPNL----TADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEH-GANIIVHST 206 (432)
T ss_pred CCCC----CHHHHHHHCCCCCEEEEEEECCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHC-CCCEEEEEC
T ss_conf 8999----99999974578750899972799973202799999999766981896357643010462012-898999853
Q ss_pred HHCCCCCCC--CEEEEECHH-HHH--HHHHCCCCCCCCCHHHCCHH---------HHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 120017665--154456778-887--65411445778312320011---------2321033478644666448899999
Q gi|254780153|r 192 QKVLGGEAG--FGIIILSPA-SVE--RLEKYVPSWPLPKIFRMVKG---------GRVMEGLFCGETINTPSLLCIEDYI 257 (391)
Q Consensus 192 QK~l~~ppG--l~~v~~s~~-al~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~TP~v~~i~al~ 257 (391)
-|-|+|-.- .|+|+.+.+ -|. |-.....+.+...-+.|... .+.......|. +++=+.-|.+.
T Consensus 207 TKyi~GHsD~lgG~vv~~g~~~w~~~~~p~l~~p~~~~~~~~~~~~~g~~~~~~~~r~~~~r~~G~---~lsP~~a~L~l 283 (432)
T PRK06702 207 TKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGN---CMSPFNAYISN 283 (432)
T ss_pred CCCCCCCCCEEEEEEEECCCCCHHCCCCHHHCCCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCC---CCCCHHHHHHH
T ss_conf 421568875033599715754110142787608835540207887413778999999999885266---67822568987
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCC------C--C-CCCEEEEEECCCCCCCCCHH
Q ss_conf 99986201031899999999779999999874797167-----668820------0--3-65317898247310113734
Q gi|254780153|r 258 DALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-----LAVDET------T--R-SNTSICMKIVDSDIASLDIN 323 (391)
Q Consensus 258 ~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-----~~~~~~------~--r-S~~~v~~~~~d~~~~~~~~~ 323 (391)
. --..+.-|.+||.+++..+-+|+++++.... +...|. + + ....++|.+.... +
T Consensus 284 r------GL~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~shp~~~la~k~~~~G~ggmlsf~l~g~~------e 351 (432)
T PRK06702 284 I------GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGL------E 351 (432)
T ss_pred C------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH------H
T ss_conf 2------789799999999999999999986299965797999988806889999727997069999945989------9
Q ss_pred HHHHHHHHHHHHHHHCCEEECCCCCCC------------C----------C-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 567888999998886282872665567------------6----------7-5056861588899999999999999999
Q gi|254780153|r 324 SQKSFCKSMLSFLEKEEIAYDIGSYRD------------A----------P-LGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 324 ~~~~~~~~~~~~l~~~g~~~~~~~~r~------------~----------~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.. +.+...|.-...+..+|+.++ . . .-+|++++= ||++.|++-||.|+.
T Consensus 352 ~~----~~f~~~l~l~~~a~slGg~~Sli~hPas~th~~~~~e~r~~~Gi~~~lvRlSVGl----Ed~eDLi~DL~qAL~ 423 (432)
T PRK06702 352 AA----KEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----EDVSDIIADLEAALV 423 (432)
T ss_pred HH----HHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHHH
T ss_conf 99----9999828817352466876520037451436438999998659893969997523----999999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 381 FQKI 384 (391)
Q Consensus 381 ~~k~ 384 (391)
..|.
T Consensus 424 ~~~~ 427 (432)
T PRK06702 424 GGKQ 427 (432)
T ss_pred HHHH
T ss_conf 8786
No 142
>PRK08443 consensus
Probab=99.17 E-value=4.8e-07 Score=64.19 Aligned_cols=312 Identities=10% Similarity=-0.009 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 6899998632103----65328988999999999999999688998-579997487348999875320578970799707
Q gi|254780153|r 25 PGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391)
Q Consensus 25 p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391)
|..+.+++.+.+- +++. +.-..++-+.+.+.+++-++.+=+ -+|+ ++.|++.++..++.-++++||.+++..=
T Consensus 44 p~~i~~a~~~a~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~~~pe~I~-it~G~~~al~~~~~al~~pGD~Vlv~~P 121 (388)
T PRK08443 44 PQAIKDAAIKAIEKGFTKYTA-VAGIPELLKAIATKLKKDNNLDYETNEII-TSNGAKHSLFNVFQALIEKGDEVIIPSP 121 (388)
T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEE-ECCCHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 999999999998559998899-98879999999999999858998831299-8688799999999998099998998268
Q ss_pred CHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEE
Q ss_conf 3688888765323876306740--57776578676785-----5657997420242022032035-----0256861488
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVI 167 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~lli 167 (391)
.|..- ...+...+ ..+..+. ...+...++++++. .+.+.++.=..-||...+..+. +|..++.++|
T Consensus 122 ~Y~~y-~~~~~~~g-~~~v~v~~~~~~~~~~d~~~l~~~i~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii 199 (388)
T PRK08443 122 YWVTY-PELVKYSG-GVPVFIETDEENGFKITAEQLKKAITPKTKVLVLNTPSNPTGSVYSKEELEAIAKVLKGTDIWVL 199 (388)
T ss_pred CCCCH-HHHHHHHC-CEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
T ss_conf 74423-99999808-84799865543486779999997478787399986898998847644789999998623575674
Q ss_pred EEECCHH---HHCC-----C--CCCCCEEEEECCHHCCCCCCCCEE--EEECHHHH-HHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 6401101---1025-----4--556857999700120017665154--45677888-76541144577831232001123
Q gi|254780153|r 168 CDATSAV---FARH-----I--DFNKLDVVTFSAQKVLGGEAGFGI--IILSPASV-ERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 168 vD~vSs~---g~~p-----~--d~~~iDv~~a~sQK~l~~ppGl~~--v~~s~~al-~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
.|-+=+- .+.. + |..+--+.+.|.-|.++ -||+-+ ++..++.+ +.....+
T Consensus 200 ~DE~Y~~l~~~~~~~~~~~~~~~~~~~~I~i~S~SK~~~-~~G~RiG~~~~p~~~l~~~~~~~~---------------- 262 (388)
T PRK08443 200 SDEMYEKLVYDGEFVSVASVSEDMFKRTITINGLSKSVA-MTGWRFGYMASKNKKLIKAMKKLQ---------------- 262 (388)
T ss_pred CCHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHCC-CCCCCEEEEEECCHHHHHHHHHHH----------------
T ss_conf 220124322699878889972224467899803432005-865146999818699999999997----------------
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
.++...++...-++...+++.- .+.-++.+.+.++++.+.+.+.+++..++....++ +..-+-+.+++
T Consensus 263 -------~~~~~~~~~~~q~aa~~al~~~-~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~P~----g~~~~w~~~~~ 330 (388)
T PRK08443 263 -------SQSTSNINSITQKAAIPALNGE-CDKDIEKMRQAFEKRRDLAVDAINAIPGLSVYKPD----GAFYLFVNIKK 330 (388)
T ss_pred -------HHCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC----EEEEEEEECCC
T ss_conf -------4467870179999999998545-24789999999999999999998747896761688----34799788888
Q ss_pred CCCCCCCHHHHHHHHHHHH-HHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 3101137345678889999-988862828726655676750568615888999999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSML-SFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
... + . ..+. ..+.+.|+++--|..=....-+|++.. .+++.++.-++-|..+.++
T Consensus 331 ~~~---d---~----~~f~~~ll~~~gV~v~PG~~Fg~~g~vRl~~~--~~~e~l~ea~~RL~~~l~~ 386 (388)
T PRK08443 331 IEK---D---S----MKFCKKLLEQEGVAVVPGIGFGMEGYFRLSFA--TSIESIKKGIERIANFVKS 386 (388)
T ss_pred CCC---C---H----HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 899---9---9----99999999819999972743588985999982--8899999999999999996
No 143
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.17 E-value=1.2e-07 Score=67.95 Aligned_cols=305 Identities=17% Similarity=0.172 Sum_probs=174.4
Q ss_pred CCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE
Q ss_conf 868887768-9689999863210365328988999999999999999688998579997487348999875320578970
Q gi|254780153|r 15 FFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV 93 (391)
Q Consensus 15 ~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~ 93 (391)
.|+.+=.+. +|..+++++...+- ..+|=|+-. ..+.++.+.+.++++.+ .|++ +.|++.++..++..++++|+.
T Consensus 33 ~ls~Nenp~g~~~~v~~a~~~~~~-~~~~YPd~~--~~~Lr~~iA~~~gv~~~-~I~v-~nGs~e~i~~~~~~~~~~g~~ 107 (359)
T PRK03158 33 KLASNENPFGCSPRVTEALASEAS-QYALYPDGY--AFELRTKVAKHLGVKEE-QLIF-GNGSDEVIQIISRALLHEGTN 107 (359)
T ss_pred EEECCCCCCCCCHHHHHHHHHHHH-HCCCCCCCC--HHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCE
T ss_conf 950899999999999999998787-367696988--89999999998684867-7998-478899999999998079981
Q ss_pred EEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCCC-CCEEEEEEECCCCEEECCEEE---ECC-CCCC
Q ss_conf 799707368888876532387630674057776578676----7855-657997420242022032035---025-6861
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDFD-RDVVFVWNGTTSGVCVPDVGF---IPE-SREG 164 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~-~~v~~~h~ETstGv~~~~~~~---~~~-~~~~ 164 (391)
+++..=+|+.. ...++..+..+..+....+ ..+++. ++.. +.+.++.=..-||...+..+. +.. ..+.
T Consensus 108 vvi~~P~f~~Y--~~~a~~~g~~~~~vpl~d~-~~dl~~~~~~i~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~ 184 (359)
T PRK03158 108 TVMANPTFSQY--RHNAVIEGAEVREVPLKDG-IHDLDAMLEAIDENTKIVWICNPNNPTGTYVEKQKLLAFLEKVPKSV 184 (359)
T ss_pred EECCCCEEEHH--HHHHHHCCCEEEEECCCCC-CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCE
T ss_conf 11379820555--9999762853799626777-66999999750758878997489999888765234899997485772
Q ss_pred EEEEEECC-HHHHC-C----CC-CCCC-E-EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 48864011-01102-5----45-5685-7-9997001200176651--54456778887654114457783123200112
Q gi|254780153|r 165 LVICDATS-AVFAR-H----ID-FNKL-D-VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 165 llivD~vS-s~g~~-p----~d-~~~i-D-v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
++|+|-.- .|... + +. ..+. . +++-+--|.++ -||+ |.++.+++.+++......
T Consensus 185 ~vvvDEaY~ef~~~~~~~~~~~l~~~~~nviv~rsfSK~~~-laGlRlGy~ia~~~li~~l~~~~~-------------- 249 (359)
T PRK03158 185 LVVLDEAYYEYVTAEDYPQTLPLLEKYENLMILRTFSKAYG-LAALRVGYGIADEELIGQLEPARL-------------- 249 (359)
T ss_pred EEEEEHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCCHHCC-CCCCCCEECCCCHHHHHHHHHHCC--------------
T ss_conf 99972278887325786203567653256236515654106-888852203189999999998538--------------
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 32103347864466644889999999986201031899999999779999999874797167668820036531789824
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391)
+++-+.....+...+|+ .+.=++...++.++..+.+++.++..+ +..+. |.++..+.
T Consensus 250 -----------~~~v~~~aq~aa~aal~---d~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~p------s~anF~l~-- 306 (359)
T PRK03158 250 -----------PFNTSTIAQAAALAALE---DQAFIQECVKKNAEGLKQYYAFCKEYG-VFYYP------SQTNFVLI-- 306 (359)
T ss_pred -----------CCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC------CCCCEEEE--
T ss_conf -----------86856999999999957---999999999999999999999998688-88999------98508998--
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 73101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
+-. .+ ...+...|.++|+++.-+..-..+..+||+.+ ++++.++|+++|+..
T Consensus 307 ~~~---~~-------~~~~~~~L~~~gi~Vr~g~~fg~~~~iRIsvg---t~~en~~ll~aL~~i 358 (359)
T PRK03158 307 DLG---IP-------GDEVFEYLLKKGYIVRSGAALGFPTGIRITVG---LKEENDEIIELLAEL 358 (359)
T ss_pred ECC---CC-------HHHHHHHHHHCCEEEEECCCCCCCCEEEEEEC---CHHHHHHHHHHHHHH
T ss_conf 689---99-------99999999819939996898999898999948---999999999999986
No 144
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.17 E-value=2.2e-07 Score=66.35 Aligned_cols=325 Identities=11% Similarity=0.061 Sum_probs=168.2
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECC
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205--789707997073
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~ 100 (391)
+|+ |.+++.+++-..+|-+..|. +...+.-++|.+++.-+ -.+| |+..||+.++|+++.=.- ..+..++...++
T Consensus 90 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~lA~~L~~~~p~~-l~~v-~f~~SGSEAvE~AiKlAr~~tgr~kiIs~~~s 166 (460)
T PRK06082 90 HPH-VIKKVTEQIAKLPFSPRRFTNETAIECAEKLTEICGGE-LNRV-LFAPGGTSVIGMALKLARHITGNYKVVSLWDS 166 (460)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCEE-EECCCHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 999-99999999975888765526889999999999857877-6979-84396589999999999885288648996078
Q ss_pred HHHHHHHHHHHCCC-----------CCEEEEECCCC--------CCCC------HH-HCCCCCCEEEEEEECCC--CEEE
Q ss_conf 68888876532387-----------63067405777--------6578------67-67855657997420242--0220
Q gi|254780153|r 101 FGLGWMSDIRQLSL-----------QDVREFTAPYG--------SLPD------FS-KVDFDRDVVFVWNGTTS--GVCV 152 (391)
Q Consensus 101 ~~~r~~~~~~~~~~-----------~~~~~~~~~~g--------~~~~------~~-~~~~~~~v~~~h~ETst--Gv~~ 152 (391)
|-++....+.--+. ..+..+..+.. ...+ ++ .++....++.+-.|... |+..
T Consensus 167 yHG~T~~als~~g~~~~r~~~~pl~~g~~~vp~p~~~~~~~~~~~~~~~~~~~~le~~ie~~g~iAA~i~EPi~~~g~~~ 246 (460)
T PRK06082 167 FHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPRADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQV 246 (460)
T ss_pred CCCCCHHHHHCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf 67762666550495433368889899975479863236666764311289999999986057978999961666788806
Q ss_pred CC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCC
Q ss_conf 32------035025686148864011011025---4--5568579997001200176-6515445677888765411445
Q gi|254780153|r 153 PD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPS 220 (391)
Q Consensus 153 ~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~ 220 (391)
|. ...+|+++++|+|+|=|.+=.++- + +.+++.-.+....|+|++= .=++.++.+++.... .
T Consensus 247 P~~~yl~~lr~lc~~~giLlI~DEVqtGfGRTG~~fa~e~~gv~PDIv~~gKglggG~~Pisav~~~~~~~~~------~ 320 (460)
T PRK06082 247 PSKAYWKRIREICDKHNVLLIIDDIPNGMGRSGEWFTHQAFDIEPDILCIGKGLGGGLVPIAAMITKDKYNTA------A 320 (460)
T ss_pred CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEECHHHHCCCCCEEEEEEHHHHHHH------C
T ss_conf 8989999999999972985760332028875443446631799982899881643897763899874885520------1
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~ 300 (391)
. . ...++|+.--|+ ...+..++|+.+++++ ..++.+++.+.+.+.+..+..-.+.+.+-
T Consensus 321 ~-------~---------~~g~~T~~gnPl-~cAaAlA~L~iie~e~----l~~~a~~~G~~l~~~L~~L~~~~p~VgdV 379 (460)
T PRK06082 321 Q-------I---------SLGHYTHEKSPI-GCAAALATMEAIEQEG----LLDKVKADSQFMREKLLEMKAKYPVIGDV 379 (460)
T ss_pred C-------C---------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 5-------7---------765436789879-9999999999997257----88999999999999999998629978852
Q ss_pred CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 00365317898247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r 301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.-+..+...-.+.|+.......+. .+.+...+.++|+.+... .++.+|+.--=.++.++++.+++.|+.++.
T Consensus 380 RG~GLm~giElv~d~~tk~~~~~~----a~~v~~~~~~~Gl~~~~~----~gnvirl~PPL~It~~eid~~l~~l~~al~ 451 (460)
T PRK06082 380 RGIGLLWGIELVTDHETKTRAYDE----AEAVLYQCLNNGLSFKVS----QGNVIQLSPPLIISREQLTEALAIFEEAIA 451 (460)
T ss_pred CCCCEEEEEEEECCCCCCCCCHHH----HHHHHHHHHHCCCEEECC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 336549999974177656566799----999999999689179108----999899979911899999999999999999
Q ss_pred HHHHHH
Q ss_conf 999987
Q gi|254780153|r 381 FQKISF 386 (391)
Q Consensus 381 ~~k~~~ 386 (391)
+....+
T Consensus 452 ev~~~~ 457 (460)
T PRK06082 452 KVCKDF 457 (460)
T ss_pred HHHHHH
T ss_conf 999865
No 145
>PRK07367 consensus
Probab=99.17 E-value=1.3e-07 Score=67.72 Aligned_cols=310 Identities=9% Similarity=-0.006 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 689999863210----3653289889999999999999996889985-79997487348999875320578970799707
Q gi|254780153|r 25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENY-RIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391)
Q Consensus 25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y-~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391)
|..+++++.+.+ .++++ +.-..++-+.+.+.+++-++.+-+- +|++ +.|++.++..++..++++||.+++.+=
T Consensus 43 p~~i~~a~~~~~~~~~~~Y~~-~~G~~~lR~aia~~~~~~~g~~~~~d~I~i-t~G~~~al~~~~~~l~~pGD~Vlv~~P 120 (385)
T PRK07367 43 PAHIKAAAKKALDEGKTRYGP-AAGEPALREAIAHKLRRENGLDYQAENILV-TNGGKQSLYNLMMALIDPGDEVIIPAP 120 (385)
T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEEE-CCCHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 899999999998658877799-999899999999999998589998504999-089899999999997489998999069
Q ss_pred CHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEE
Q ss_conf 3688888765323876306740--57776578676785-----565799742024202203203-----50256861488
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVI 167 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~lli 167 (391)
.|..- ...+...+ ..+..+. ...|...++++++. .+.+.+++-..-||...+..+ .+|.+++.++|
T Consensus 121 ~y~~y-~~~~~~~g-~~~v~v~~~~~~~~~~d~~~l~~~~~~~~k~~il~~P~NPTG~v~s~~~l~~l~~~a~~~~~~iI 198 (385)
T PRK07367 121 YWLSY-PEMVKLAG-GTPVIVPTDAATGFKITPEQLRQAITPKTKLLVLNSPSNPTGMVYTPEEIAALAEVIVEHDLYVV 198 (385)
T ss_pred CCCCC-HHHHHHCC-CEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
T ss_conf 87771-99999809-85799213621276779999997378677499978997987856657888899888875586997
Q ss_pred EEECCH---HHHCC-CC-----CCCC--EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 640110---11025-45-----5685--7999700120017665--1544567788876541144577831232001123
Q gi|254780153|r 168 CDATSA---VFARH-ID-----FNKL--DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 168 vD~vSs---~g~~p-~d-----~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
.|-+=+ +.+.+ .. .+.. -+++.|.-|.++ .|| +|.++..++.+++....+.
T Consensus 199 sDEiY~~l~f~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~~~~~~~~i~~~~~~~~--------------- 262 (385)
T PRK07367 199 SDEIYEKILYDGAEHLSIGSLGPEIFQRTIISNGFAKAYS-MTGWRVGYLAGPVELIKAASSIQS--------------- 262 (385)
T ss_pred ECCCCHHHCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCCC-CCCCEEEEEECCHHHHHHHHHHHH---------------
T ss_conf 1132112105897777888859420246401001000367-761248878568999999998542---------------
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
..+.++ ++..-++...+|+.- +.-++.+.+.++++.+.+++.+...+++.... |+ +..-+-+.+++
T Consensus 263 -------~~~~~~-~~~~q~aa~~al~~~--~~~~~~~~~~~~~rr~~l~~~l~~~~~~~~~~--P~--G~~~~w~~l~~ 328 (385)
T PRK07367 263 -------HSTSNV-CTFAQYGAIAALESP--QDCVEEMRQAFAERRQLMLDGLNAIPGLSCPK--PE--GAFYVFVDISK 328 (385)
T ss_pred -------HCCCCC-CHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC--CC--EEEEEEEECCC
T ss_conf -------055545-789999999999584--98999999999999999999998379967558--88--47999788899
Q ss_pred CCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 31011373456788899999-8886282872665567675056861588899999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
... + ..++.. ++.+.|+++--|..=.....||++.. .+++.++.-++.|+.+.+
T Consensus 329 ~~~---~-------~~~~~~~ll~~~gV~v~PG~~Fg~~~~~Rl~~a--~~~~~l~ea~~RL~~~l~ 383 (385)
T PRK07367 329 TGL---G-------SLEFCRQLLEEHHVAAIPGIAFGADDHIRLSYA--TDLATIEKGLERLERFVR 383 (385)
T ss_pred CCC---C-------HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf 899---9-------999999999969999975874699993999970--989999999999999998
No 146
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.17 E-value=1.8e-09 Score=79.66 Aligned_cols=238 Identities=15% Similarity=0.081 Sum_probs=142.6
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 88776896899998632103653289889999999999999996889985799974873489998753205789707997
Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
.||+ |+ ++++|.....| |-..-=....++..+.++++|+.+. .+|++ |||++...++..++++++.+++.
T Consensus 8 t~~t---~~-m~~a~~~a~~G--dd~Yg~D~t~~~le~~~a~l~G~ea---alfv~-sGT~AN~ial~~~~~~g~~vi~~ 77 (288)
T pfam01212 8 TGPT---PA-MREAMAAAMVG--DEVYGGDPTVNRLEDRVAELFGKEA---ALFVP-SGTMANQLALMAHCRRGDEVICG 77 (288)
T ss_pred CCCC---HH-HHHHHHHCCCC--CCCCCCCHHHHHHHHHHHHHHCCCE---EEECC-CCHHHHHHHHHHHCCCCCEEEEE
T ss_conf 8899---99-99999823357--7322679899999999999869982---99868-86799999999838899889983
Q ss_pred ECCHHH-HHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC---------CCEEEEEEECC----CCEEECCEE-----EE
Q ss_conf 073688-888765323876306740577765786767855---------65799742024----202203203-----50
Q gi|254780153|r 98 WESFGL-GWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD---------RDVVFVWNGTT----SGVCVPDVG-----FI 158 (391)
Q Consensus 98 ~g~~~~-r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~v~~~h~ETs----tGv~~~~~~-----~~ 158 (391)
....-. .-..-...+.+.....+..+..-..++++++.. ....++..|.+ -|...+..+ .+
T Consensus 78 ~~sHi~~~E~ga~~~~~G~~~~~l~~~~~G~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG~~~~~~el~~i~~~ 157 (288)
T pfam01212 78 EPAHIYFDETGGHAELGGAQPVPLPGAEAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAI 157 (288)
T ss_pred CCCCCEEECCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHH
T ss_conf 57676545677799982982584478778982999999987644985467654799995544889665578999999999
Q ss_pred CCCCCCEEEEEE------CCHHHHCCCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 256861488640------11011025455-68579997001200176651544567788876541144577831232001
Q gi|254780153|r 159 PESREGLVICDA------TSAVFARHIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 159 ~~~~~~llivD~------vSs~g~~p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
|++++..+.+|+ +.+.+..+-++ ..+|.++.|.-|++++|-| ++++.+++.+++......
T Consensus 158 a~~~gl~lHmDGARl~nA~~a~~~~~~e~~~~~D~v~~~~sK~lga~~G-avl~g~~~~i~~a~~~rk------------ 224 (288)
T pfam01212 158 AREHGIPLHLDGARLANAAVALGVIVKEITSYADSVSMSLSKGLGAPVG-SVLAGSDDFIAYAIRQRK------------ 224 (288)
T ss_pred HHHCCCEEEEHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCEE-EEEEECHHHHHHHHHHHH------------
T ss_conf 9980993763087898888760999889854688899984357886100-389828999999999999------------
Q ss_pred HHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 123210334786446--6644889999999986201031899999999779999999874797167
Q gi|254780153|r 232 GGRVMEGLFCGETIN--TPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN 295 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~--TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~ 295 (391)
.. -+.++. -++...+++| +. ++.. .++..++++.+.+.++..++...
T Consensus 225 ~l-------Gg~mrq~g~~aaa~~~aL--------~~-~~~~-l~~dh~~A~~La~~l~~~~~~~~ 273 (288)
T pfam01212 225 YL-------GGGMRQAGVLAAAGLRAL--------EE-GVAR-LGRDHATARRLAEGLELLRGVIP 273 (288)
T ss_pred HH-------HCCHHHHHHHHHHHHHHH--------HH-CHHH-HHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 97-------264256679999999999--------80-8988-88889999999999976899322
No 147
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.17 E-value=3.5e-08 Score=71.43 Aligned_cols=285 Identities=19% Similarity=0.137 Sum_probs=158.3
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+=+.. -.+..+||-+|..+++++++++|+.+++...-||.- .........+..++..
T Consensus 71 ~NPT~~~lE~~l---a~LEgg~----~a~~~sSGMaAi~~~ll~ll~~Gd~iv~~~~~YGgT~~l~~~~l~~~GI~~~~v 143 (406)
T PRK07810 71 GNPTVSMFEERL---RLIEGAP----ACFATASGMAAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV 143 (406)
T ss_pred CCHHHHHHHHHH---HHHCCCC----EEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf 886289999999---9970998----599843899999999999728999899837986377999997764487499996
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEE---CCEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--56579974202420220---3203--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCV---PDVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~---~~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. ++++++. .....+++.||.+--.. ++.. .+++.+++++|||-+ +-+...|++ .+.|+++-|.
T Consensus 144 d~~-----d~~~~~~ai~~~Tk~v~~EtpsNP~l~v~Di~aia~iA~~~g~~~vVDNTfaTP~~~rPl~-~GADiVvhS~ 217 (406)
T PRK07810 144 DGD-----DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFP-LGVDVVVYSG 217 (406)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH-CCCCEEEEEC
T ss_conf 898-----8599997558886289984489998561167999999997498599978877755358421-2898899953
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-|+|-.-+ |.|+.+++.++... .... ...|. +++-+..|.+...| ..+
T Consensus 218 TKyi~GHsd~lgG~v~~~~~~~~~~~--------------~~~~-----~~~G~---~lsP~~a~l~lrGL------~TL 269 (406)
T PRK07810 218 TKHIDGQGRVLGGAILGDREYIDGPV--------------QKLM-----RHTGP---ALSAFNAWTLLKGL------ETL 269 (406)
T ss_pred CCCCCCCCCEECCEEECCHHHHHHHH--------------HHHH-----HHCCC---CCCHHHHHHHHCCC------CCH
T ss_conf 53236887603636952678889999--------------9999-----97389---89878889987068------979
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------------CC-CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999779999999874797167668820-------------03-65317898247310113734567888999998
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDET-------------TR-SNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~-------------~r-S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
.-|.+||.+++..+-+|+++++..... ..|. .+ ....+.|.+...... .....-.+...
T Consensus 270 ~lRm~r~~~nA~~vA~~L~~hp~V~~V-~yPgL~shp~h~la~r~~~g~G~~~sf~l~~~~~~------~~~~~~~~~~~ 342 (406)
T PRK07810 270 AIRVQHSNASALRIAEFLEGHPAVRWV-RYPYLPSHPQYDLAKRQMSGGGTVVTFELDAPEDA------AKQRAFEVLDK 342 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEE-ECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHH------HHHHHHHHHHH
T ss_conf 999999999999999999739981379-80578778177899844789986328998036178------89999999982
Q ss_pred HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676----------------------75-05686158889999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
|.--..+..+|+.++. .. -+|++++ .||++.|++-||.|+
T Consensus 343 l~l~~~a~slGg~~SLi~~Pas~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~~DLi~DL~qAL 405 (406)
T PRK07810 343 LRLIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRISVG----LEDTDDLIADLDRAL 405 (406)
T ss_pred CCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHC
T ss_conf 872435335676660466775356510799899866979495999932----199999999999754
No 148
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.17 E-value=6e-07 Score=63.57 Aligned_cols=326 Identities=12% Similarity=0.044 Sum_probs=183.1
Q ss_pred CCCCCCC-CCCCHHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCC-C-CEEEEECCCCHHHHHHHHHHC
Q ss_conf 8868887-768968999986321036-532898--899999999999999968899-8-579997487348999875320
Q gi|254780153|r 14 PFFSSGP-CAKRPGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPE-N-YRIAIVPASDTGAVEMALWSL 87 (391)
Q Consensus 14 ~~F~pGP-~~~~p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~-~-y~v~~l~GsgT~~~ea~~~nl 87 (391)
+||+-|= ---+|..+.+++...+.. ..|..+ =..++-+.+-+.+++-+++.+ | -..++++.|++.++..++.-+
T Consensus 47 I~L~iGePDf~tP~~i~~a~~~a~~~~~~~y~~~~G~~eLReaIa~~~~~~~gv~~~dp~~eIivt~Ga~~al~~~~~al 126 (411)
T PRK06290 47 IDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQELKEAAARYMEKVYGVKDLDPVTEVIHSIGSKPALAYLPSCF 126 (411)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf 77899899998799999999999837998888987649999999999999719987897767998988899999999996
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE----
Q ss_conf 578970799707368888876532387630674--057776578676785-----565799742024202203203----
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG---- 156 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~---- 156 (391)
+++||.+++-.=+|-.. ..+.+..+..+..+ ..+.+..+++++++. .+.+.++.=..-||...+...
T Consensus 127 l~pGDeVli~~P~yp~Y--~~~~~~~G~~~v~vp~~~e~~~~~d~~~l~~~i~~ktK~iilnsP~NPTG~v~s~e~l~~i 204 (411)
T PRK06290 127 INPGDVTLMTVPGYPVT--ATHTKWYGGEVYNLPLLEENNFLPDLDAIPKDVLEKAKLLYLNYPNNPTGAVATKEFYKEV 204 (411)
T ss_pred CCCCCEEEECCCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCEEECHHHHHHH
T ss_conf 69999899868873658--9999984998999865666787659577198625576599988999998614248999999
Q ss_pred -EECCCCCCEEEEEECCHHH---HCCCC------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf -5025686148864011011---02545------56857999700120017665--154456778887654114457783
Q gi|254780153|r 157 -FIPESREGLVICDATSAVF---ARHID------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLP 224 (391)
Q Consensus 157 -~~~~~~~~llivD~vSs~g---~~p~d------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~ 224 (391)
.+|..++.++|.|-+=+-. ..|+. ....-+.+.|.-|.++ .|| +|.++..++.++.....+.
T Consensus 205 ~~~a~~~~i~vIsDEiY~~l~yd~~~~s~~s~~~~~~~~I~i~S~SK~~~-mtGwRiG~~i~~~~li~~~~~i~~----- 278 (411)
T PRK06290 205 VDFAFENDIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSFSKAYN-MTGWRLAFVAGNELIVKAFAAVKD----- 278 (411)
T ss_pred HHHHHHCCCEEECHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCCCCC-CCEEEEEEEECCHHHHHHHHHHHH-----
T ss_conf 99986428776423535551008977761025677441799825774678-722458988669999999999997-----
Q ss_pred CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 12320011232103347864466644889999999986201031899999999779999999874797167668820036
Q gi|254780153|r 225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS 304 (391)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS 304 (391)
++....++..=++...+|+.- .-++.+.+.++++.+.+.+.+...+ +....++ +
T Consensus 279 ------------------~~~~~~~~~~Q~aa~~aL~~~---~~~~~~~~~y~~rrd~l~~~L~~~G-~~~~~P~----G 332 (411)
T PRK06290 279 ------------------NTDSGQFIAIQKAGIYCLRHP---EITEKTRAKYERRLDKMVKILKEVG-FNAKMPG----G 332 (411)
T ss_pred ------------------HCCCCCHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC----E
T ss_conf ------------------464761499999999995598---9999999999999999999999779-8506887----5
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 531789824731011373456788899999-88862828726655676750568615888999999999999999999
Q gi|254780153|r 305 NTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
..-+-+.+++........... .++.. +|.+.++++--| ...|.-+|++.- .+.++++..++.|+.+-++
T Consensus 333 afY~~~~ip~~~~~~~~~~~~----~efa~~LLee~~VavvPG--~~fG~yvRis~~--~~~e~leea~~rl~~~~~~ 402 (411)
T PRK06290 333 TFYLYVKAPKGTKSGIKFANA----EEFSQYLIKEKLISTVPW--DDAGHFLRMSVT--FEAKSIEEEDRILNEVKRR 402 (411)
T ss_pred EEEEEEECCCCCCCCCCCCCH----HHHHHHHHHHCCEEEECC--CCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 369968787766577766899----999999998489999565--515355999983--8899999999999999998
No 149
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.17 E-value=4.6e-08 Score=70.66 Aligned_cols=283 Identities=16% Similarity=0.151 Sum_probs=167.3
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++ .|..+-+... + ++.+||-+|+.+++++++++||.+++....||. ++.+...+..+..+...
T Consensus 59 ~nPT~~~le~---~la~LEgg~~---a-~~~sSGmaAi~~~ll~~l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gI~~~~~ 131 (386)
T PRK06767 59 GNPTVKLFEE---RMAVLEGGEE---A-LAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFC 131 (386)
T ss_pred CCHHHHHHHH---HHHHHHCCCE---E-EEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 8867999999---9999849971---6-8852789999999973079999899837982234669999888737589996
Q ss_pred ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 05777657867678--5565799742024202203203-----502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.++++ ..+...+++.||.+--...+.. .+++++++++|||-+ +-+...|++. ++|+++-|.
T Consensus 132 d~~-----~~~~~~~~i~~~Tklv~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atP~~~~Pl~~-GaDivihS~ 205 (386)
T PRK06767 132 DME-----TEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLEL-GCDAVVHSA 205 (386)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC-CCCEEEEEC
T ss_conf 898-----88999975688825999977999876712799999986006734997457642200154436-797899714
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-++|-..+ |.++.+.+.+.+... .+. ...|. +++-+..|.+...| ..+
T Consensus 206 TKYi~GHsD~l~G~vv~~~~~~~~~~~-----------~~~--------~~~G~---~~sp~~a~l~~rGl------~TL 257 (386)
T PRK06767 206 TKYIGGHGDVVAGVTICKTRALAEKIR-----------PMR--------KDIGG---IMAPFDAWLLLRGL------KTL 257 (386)
T ss_pred CCCCCCCCCCEEEEEEECHHHHHHHHH-----------HHH--------HHCCC---CCCCHHHHHHHCCC------CCH
T ss_conf 640047766031388616799999999-----------999--------84178---78934778986267------878
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE
Q ss_conf 999999997799999998747971676688200--------365317898247310113734567888999998886282
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEI 341 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~ 341 (391)
.-|.+|+.+++..+-+|+++++..... -.|.+ .+...++|.+.+.. +. ...+...|.--..
T Consensus 258 ~lRm~~~~~nA~~lA~~L~~hp~V~~V-~yP~~~la~k~~~~~gg~~sf~l~~~~------~~----~~~f~~~l~l~~~ 326 (386)
T PRK06767 258 AVRMDRHCDNAEKIVSFLKNHDAVEGV-WYPEGELASRQMKRGGGVISFSIKGGK------EE----TQAFINDLHFITI 326 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEE-ECCCHHHHHHHHHCCCCEEEEEEECCH------HH----HHHHHHHCCCCEE
T ss_conf 999999999999999999639983758-796888998872138946899993889------99----9999983887524
Q ss_pred EECCCCCCCCC-----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 87266556767-----------------------50568615888999999999999999999
Q gi|254780153|r 342 AYDIGSYRDAP-----------------------LGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 342 ~~~~~~~r~~~-----------------------~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
++.+|+.++.- .-+|+++| .||++.|++-|+.|+++
T Consensus 327 a~SlGg~eSLi~~p~~~~h~~~~~e~r~~~Gi~~~lvRlSvG----lEd~~DLi~Dl~qAL~~ 385 (386)
T PRK06767 327 AVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG----LESWEDIVSDLEQALKK 385 (386)
T ss_pred EECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHC
T ss_conf 205677630235764235645899999866979297999941----09999999999999841
No 150
>PRK07046 aminotransferase; Validated
Probab=99.16 E-value=9.2e-08 Score=68.75 Aligned_cols=326 Identities=12% Similarity=0.039 Sum_probs=164.0
Q ss_pred CHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECC
Q ss_conf 968999986321036-53289889999999999999996889985799974873489998753205--789707997073
Q gi|254780153|r 24 RPGWSLGILEGALLG-RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~-~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~ 100 (391)
+|+ |.+++.+++-. .++--+ .+..-++-+.|.+.++++ .+.| ..|||.+.+.++.=.- ..+++++...|+
T Consensus 92 ~p~-v~~Av~~q~~~g~~~~~~--~~~~~~lae~l~~~~~~~---~~~f-~~sGsEA~~~AirlAR~~TgR~~Ii~f~g~ 164 (452)
T PRK07046 92 PAP-VARALAEQARRGLTTMLP--SEDAAWVGEELARRFGLP---YWQV-ATTASDANRFVLRWARAATGRKKILVFNGC 164 (452)
T ss_pred CHH-HHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHCCC---EEEE-ECCHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 999-999999998725545578--579999999989873886---1775-377999999999998645499769996367
Q ss_pred HHHHHHHHH-HH-CCCCCEE--------------EEECCCCCCCCHHHCCCCCCEEEEEEEC---CCCEEECCE------
Q ss_conf 688888765-32-3876306--------------7405777657867678556579974202---420220320------
Q gi|254780153|r 101 FGLGWMSDI-RQ-LSLQDVR--------------EFTAPYGSLPDFSKVDFDRDVVFVWNGT---TSGVCVPDV------ 155 (391)
Q Consensus 101 ~~~r~~~~~-~~-~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~v~~~h~ET---stGv~~~~~------ 155 (391)
|=+. .... .. ..+.... ....+++....++..-...+++.+-.|. +.|+..|..
T Consensus 165 YHG~-~d~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~nd~~~le~~l~~~~iAAvi~EPi~g~~G~i~p~~~fl~~l 243 (452)
T PRK07046 165 YHGT-VDDVFVDLADGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVACVLAEPAMTNIGMVLPEPGFWEAL 243 (452)
T ss_pred CCCC-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 6786-057898647998667898889887767764301668789999971789867999976886788757999999999
Q ss_pred EEECCCCCCEEEEEECCHHHHCC---CCCCCCEEEEECCHHCCCC-CCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 35025686148864011011025---4556857999700120017-6651544567788876541144577831232001
Q gi|254780153|r 156 GFIPESREGLVICDATSAVFARH---IDFNKLDVVTFSAQKVLGG-EAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 156 ~~~~~~~~~llivD~vSs~g~~p---~d~~~iDv~~a~sQK~l~~-ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
..+|.++++|+|+|=|.++-.-+ ...+++.=.+..--|+|++ -| ++.+..+.+..++......... ..
T Consensus 244 relc~~~giLLI~DEV~T~r~g~Gg~~~~~Gv~PDl~t~gK~iggG~P-~ga~~~~~~i~~~~~~~~~~~~-------~g 315 (452)
T PRK07046 244 RELTRRHGTLLVIDETHTISSGPGGYTRAHGLEPDFLVVGKPIAGGVP-CAVYGFSAALAERARAAKASAP-------PG 315 (452)
T ss_pred HHHHHHCCEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEHHHHCCCCC-EEEECCHHHHHHHHHHHCCCCC-------CC
T ss_conf 999975897999936661001685387986879666764443128886-3434025999988875214567-------87
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 12321033478644666448899999999862010318999999997799999998747971676688200365317898
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK 311 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~ 311 (391)
....++|++--|+ ...+....|+.+++++-+++..++-++..+.+.+.+++.+.- ..+ ....+...+.|.
T Consensus 316 ------~~~~ggTf~gnpl-a~AAa~A~L~~l~~~~~~~~~~~~g~~L~~gL~~~~~~~~~~-~~v--~g~G~~~~~~f~ 385 (452)
T PRK07046 316 ------HSGIGTTLSANAL-AMAAMRATLAEVMTDAAYAHMFALAARLAAGLRATIARHGLP-WHV--TRIGARVEFQFA 385 (452)
T ss_pred ------CCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-EEE--EEECCEEEEEEE
T ss_conf ------5687888787989-999999999999555299999999999999999999867997-599--755746899960
Q ss_pred ECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 24731011373--4567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r 312 IVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 312 ~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
..++. ...+. ..+......+...+.++|+.+. ++ +..+.++. .++++||+.+++++|.++.++-
T Consensus 386 ~~~~~-~~~~~~~~~d~~~~~~~~~~ll~rGVll~--p~---~n~~~~sp--~~T~edID~~v~a~~~al~el~ 451 (452)
T PRK07046 386 PTPPR-NGAEAGAALDGELEHALHLYLLNRGVLIT--PF---HNMMLVCP--QTTAEDVDRLVAAFDACLGELL 451 (452)
T ss_pred CCCCC-CHHHHHHCCCHHHHHHHHHHHHHCCEEEC--CC---CCCEEECC--CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 78875-67888744339999999999997995588--76---75477864--4899999999999999999850
No 151
>PRK08912 hypothetical protein; Provisional
Probab=99.16 E-value=5.2e-07 Score=63.97 Aligned_cols=328 Identities=16% Similarity=0.080 Sum_probs=178.5
Q ss_pred CCCCCCCCCCC-CCCCHHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHHH
Q ss_conf 89988868887-7689689999863210365328---9889999999999999996889985--7999748734899987
Q gi|254780153|r 10 KPKRPFFSSGP-CAKRPGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEMA 83 (391)
Q Consensus 10 ~p~~~~F~pGP-~~~~p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea~ 83 (391)
.+.-+|++-|= .--.|..+++++.+++-+-+|+ +.=..++-+.+-+.+++.+++.-+. +| +++.|++.++..+
T Consensus 25 ~~~~I~L~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~p~~~V-~vt~Ga~~al~~~ 103 (387)
T PRK08912 25 EHGAINLGQGFPDDPGPEDVRRAAADALLDGYNQYPPMMGLPELRQAVAAHYARFHGLDLDPMTEV-MVTSGATEALAAA 103 (387)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHH
T ss_conf 799277369789999889999999999852999898998729999999999999868998988729-9876689999999
Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE
Q ss_conf 53205789707997073688888765323876306740-57776578676785-----5657997420242022032035
Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF 157 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~ 157 (391)
+.-++++||.+++..=.|... ...+...+. .+..+. .+.+...+.+.++. .+.+.++.=..-||...+..+.
T Consensus 104 ~~al~~pGD~Vlv~~P~y~~y-~~~~~~~G~-~~~~v~~~~~~~~~d~~~l~~~~~~~tk~iil~~P~NPTG~v~s~e~l 181 (387)
T PRK08912 104 LLALVEPGDEVVLFQPLYDSY-LPIIRRAGG-VPRLVRLEPPHWRLPEAALAAAFSPRTKAVLLNNPLNPAGKVFPREDL 181 (387)
T ss_pred HHHHCCCCCEEEEECCCCHHH-HHHHHHCCC-EEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf 999669989899948808117-999997298-899756558777889999985278886699989998988856869999
Q ss_pred -----ECCCCCCEEEEEECCHH---HHC-CCC---CC---CCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCC
Q ss_conf -----02568614886401101---102-545---56---8579997001200176651--5445677888765411445
Q gi|254780153|r 158 -----IPESREGLVICDATSAV---FAR-HID---FN---KLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPS 220 (391)
Q Consensus 158 -----~~~~~~~llivD~vSs~---g~~-p~d---~~---~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~ 220 (391)
+|..++..+|.|-+=+- .+. +.. .. +--+.+.|.-|.++ .||+ |.++..++.++++.....
T Consensus 182 ~~l~~~a~~~~i~vi~DEiY~~l~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~-m~G~RiG~~~~~~~li~~l~~~~~- 259 (387)
T PRK08912 182 ALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMALPGMRERTVKIGSAGKIFS-LTGWKVGFVCAAPPLLRVLAKAHQ- 259 (387)
T ss_pred HHHHHHHHHCCEEEEECCCHHHEEECCCCCCHHHCCCCCCCCEEEECCCCCEEC-CCCCCEEEEEECHHHHHHHHHHHH-
T ss_conf 999998865797998026523315678654044406676673699856777520-553327999839999999999987-
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~ 300 (391)
..+..||+.. -++...+|..- +.-++.+.+..+++.+.+.+.+...+ +.....+
T Consensus 260 ---------------------~~~~~~~~~~-Q~a~a~~l~~~--~~~~~~~~~~~~~rr~~l~~~L~~~g-~~~~~~~- 313 (387)
T PRK08912 260 ---------------------FLTFTTPPNL-QRAVAYGLGKP--DDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQ- 313 (387)
T ss_pred ---------------------HCCCCCCHHH-HHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC-
T ss_conf ---------------------5855766999-99999997387--79999999999999999999999769-8562798-
Q ss_pred CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCC-CC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 00365317898247310113734567888999998886282872665--5676-75-05686158889999999999999
Q gi|254780153|r 301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDA-PL-GLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~-~~-~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+..-+...+...... . .+..+ ....+.+.|+++--|. |..- ++ .+|++.- .+++.++.-++-|+
T Consensus 314 ---G~~~~~~~~~~~~~~---~-~~~~f---~~~ll~e~gV~~vPG~~F~~~~~~~~~iRlsfa--~~~e~l~ea~~RL~ 381 (387)
T PRK08912 314 ---GTYFLTVDLAPLGLA---E-DDVAF---CRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLA 381 (387)
T ss_pred ---CEEEEEEECCCCCCC---C-CHHHH---HHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEC--CCHHHHHHHHHHHH
T ss_conf ---158998851455899---8-99999---999999689999815012899999985999979--99999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 377 WVFY 380 (391)
Q Consensus 377 ~~~~ 380 (391)
.+++
T Consensus 382 ~~lk 385 (387)
T PRK08912 382 AAFR 385 (387)
T ss_pred HHHH
T ss_conf 9983
No 152
>PRK07483 hypothetical protein; Provisional
Probab=99.16 E-value=2.5e-07 Score=66.01 Aligned_cols=332 Identities=11% Similarity=0.038 Sum_probs=167.5
Q ss_pred CHHHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCC-------CCCC-
Q ss_conf 96899998632103--65328988999999999999999688998-5799974873489998753205-------7897-
Q gi|254780153|r 24 RPGWSLGILEGALL--GRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLL-------GYRG- 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l--~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~-------~~~~- 92 (391)
+|+ |.+++.+++- ...|-+.--.+...+.-+.|.++. |.+ .+++| ..|||.++|+++.=.. .++.
T Consensus 48 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~Lae~L~~~~--p~~~~~v~f-~~sGsEAve~AiklAr~y~~~~g~~~r~ 123 (443)
T PRK07483 48 HPR-VIAAIKAQIDRLAYAHTSFFTTEPAEALADRLVAAA--PAGLEHVYF-VSGGSEAVEAALKLARQYFVEKGQPQRR 123 (443)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 799-999999998336874457557789999999999857--888587999-6866889999999999999871899872
Q ss_pred EEEEEECCHHHHHHHHHHHCC---------C--CCEEEEECCC-------CCCCC------HHHCC------CCCCEEEE
Q ss_conf 079970736888887653238---------7--6306740577-------76578------67678------55657997
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLS---------L--QDVREFTAPY-------GSLPD------FSKVD------FDRDVVFV 142 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~---------~--~~~~~~~~~~-------g~~~~------~~~~~------~~~~v~~~ 142 (391)
.++...++|=++.......-+ . ..+..+..++ ++.+. .++++ ....++.+
T Consensus 124 ~ii~~~~~yHG~t~gals~sg~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAav 203 (443)
T PRK07483 124 HFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRDQRAGETDEAYGQRLADELEAKILELGPDTVAAF 203 (443)
T ss_pred EEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 89998378878850011014761015888888888444068875445678888789999999999999986088867899
Q ss_pred EEECCC----CEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEE
Q ss_conf 420242----022032------035025686148864011011025---4--5568579997001200176-65154456
Q gi|254780153|r 143 WNGTTS----GVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIIL 206 (391)
Q Consensus 143 h~ETst----Gv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~ 206 (391)
-.|... |+..|. .+.+|+++++++|+|=|.+=.++- + +..++.=.+...-|+|++= .=++.++.
T Consensus 204 i~EPi~g~~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~a~~~ 283 (443)
T PRK07483 204 VAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLLTIAKGLGAGYQPIGAVLA 283 (443)
T ss_pred EEECCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEE
T ss_conf 98343047588544888999999999986695899961522788543775300045589810133322488773279975
Q ss_pred CHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 77888765411445778312320011232103347864466644889999999986201031899999999779999999
Q gi|254780153|r 207 SPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQF 286 (391)
Q Consensus 207 s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~ 286 (391)
+++..+.... .. .++ ..++|+.-=|+ ...+...+|+.+++++ ...+.+++.+.+.+.
T Consensus 284 ~~~i~~~~~~---~~---~~~------------~hg~T~~gnpl-a~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~ 340 (443)
T PRK07483 284 SDRIYDAIAD---GS---GFF------------QHGHTYLGHAT-ACAAALAVQRVIAEDG----LLANVRARGEQLRAR 340 (443)
T ss_pred CHHHHHHHCC---CC---CCC------------CCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHH
T ss_conf 6899975436---87---533------------45888889989-9999999999998646----999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCEEE-EE-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC-C--CCCCEEEEECCC
Q ss_conf 87479716766882003653178-98-2473101137345678889999988862828726655-6--767505686158
Q gi|254780153|r 287 IQENDWIENLAVDETTRSNTSIC-MK-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY-R--DAPLGLRVWVGV 361 (391)
Q Consensus 287 i~~~~~~~~~~~~~~~rS~~~v~-~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-r--~~~~~~RIg~~g 361 (391)
++..-.-.+.+. +.|...... +. +.|+..... .+........+.....++|.++...+. . ..+..+|+.--=
T Consensus 341 L~~l~~~~p~I~--dVRG~GLm~gielv~~~~~~~~-~d~~~~~~~~i~~~~~~~Gll~~~~g~~~~g~~~~~i~l~PPL 417 (443)
T PRK07483 341 LRERLGQHPHVG--DIRGRGLFVGVELVADRATKAP-FDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPF 417 (443)
T ss_pred HHHHHHCCCCEE--EEECCEEEEEEEEECCCCCCCC-CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCC
T ss_conf 999986499778--8540414899997326765677-7756899999999999789589877776457769989998996
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 889999999999999999999998
Q gi|254780153|r 362 TVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 362 ~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
.++.++|+.+++.|+.++.++-++
T Consensus 418 ~it~~eid~~i~~l~~aL~~v~a~ 441 (443)
T PRK07483 418 IITAQQIDEIVERLGDAIDAALAA 441 (443)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 289999999999999999999984
No 153
>pfam01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor.
Probab=99.16 E-value=3.5e-08 Score=71.36 Aligned_cols=280 Identities=19% Similarity=0.207 Sum_probs=160.8
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-...+++. |..+=+... + ++.+||-.|..+++++++++|+.+++....||.- .++...+..+.++...
T Consensus 50 ~nPt~~~le~~---la~LEg~~~---a-~~~~SGmaAi~~~ll~l~~~Gd~il~~~~~Yg~t~~~~~~~l~~~Gi~v~~~ 122 (381)
T pfam01053 50 GNPTRDALEER---IAALEGGEA---A-LAFSSGMAAIFAALLALLKAGDHVVATDDLYGGTYRLFEKVLPRFGIEVTFV 122 (381)
T ss_pred CCHHHHHHHHH---HHHHHCCCE---E-EEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 88679999999---999819973---8-9935889999999975579999899957873758999999887158506762
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC--E---EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--5657997420242022032--0---3502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD--V---GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~--~---~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. ++++++. .....+++.||.+--.... . ..+++++++++|||-+ +-+...|++. ++|+++-|.
T Consensus 123 d~~-----d~~~~~~~i~~~T~li~~EspsNP~l~v~Di~~ia~iA~~~gi~~vVDNT~atP~~~~Pl~~-GaDivvhS~ 196 (381)
T pfam01053 123 DPS-----DLDALEAAIKPNTKAVFLETPTNPLLKVVDIEAIAKIAKKHGALVVVDNTFASPYLQRPLEL-GADIVVHSA 196 (381)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCHHHHCCCHHC-CCCEEEEEC
T ss_conf 665-----86789975588842999974899860512609999998645735998788600521241330-797799753
Q ss_pred HHCCCCCCCC--EEEEECH--HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 1200176651--5445677--88876541144577831232001123210334786446664488999999998620103
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSP--ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG 267 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~--~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g 267 (391)
-|-++|-.-+ |.|+.+. +..++... +. ...|. +++-+..|.+...| .
T Consensus 197 TKyi~GhsDvl~G~v~~~~~~~~~~~l~~------------~~--------~~~G~---~~~p~~a~l~~rgl------~ 247 (381)
T pfam01053 197 TKYIGGHSDVVGGVVVVNGREELAKRLRF------------LQ--------NATGA---VLSPFDAWLLLRGL------K 247 (381)
T ss_pred CCCCCCCCCCEEEEEEECCCHHHHHHHHH------------HH--------HHHCC---CCCHHHHHHHHHCC------C
T ss_conf 43036887613059996882668999999------------99--------86168---78868889987147------8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 1899999999779999999874797167-----6688200--------36531789824731011373456788899999
Q gi|254780153|r 268 GLSACVERCNANAAVLFQFIQENDWIEN-----LAVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLS 334 (391)
Q Consensus 268 Gl~~~~~r~~~~a~~l~~~i~~~~~~~~-----~~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 334 (391)
.+.-|.+|+.+++..+-+|++.++.... +...|.+ .....+.|.+.++. . .+.+..
T Consensus 248 TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~r~~~g~ggl~sf~l~~~~-------~----~~~f~d 316 (381)
T pfam01053 248 TLGLRMERHQENALKLAEFLEEHPKVEKVYYPGLPSHPGHELAKKQMSGFGGMLSFELKGGE-------A----ASKFLD 316 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHH-------H----HHHHHH
T ss_conf 79999999888999999999729997779575899980499999758999973189867899-------9----999998
Q ss_pred HHHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 88862828726655676----------------------75-05686158889999999999999999
Q gi|254780153|r 335 FLEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 335 ~l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.|.--..+..+|+.++. .. -+|+++|= ||++.|++-|+.||
T Consensus 317 ~l~lf~~~~SlGg~eSLi~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGl----Ed~~DLi~DL~qAL 380 (381)
T pfam01053 317 NLKLFSLAESLGGVESLISHPATMTHASIPPEEREAAGITDGLIRLSVGI----EDVDDLIADLKQAL 380 (381)
T ss_pred HCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHC
T ss_conf 47713353565875606557641353118999998669793959999500----99999999999863
No 154
>PRK06541 hypothetical protein; Provisional
Probab=99.16 E-value=2.4e-07 Score=66.15 Aligned_cols=330 Identities=11% Similarity=0.029 Sum_probs=170.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------CC-CCC-E
Q ss_conf 968999986321036532898-89-99999999999999688998579997487348999875320------57-897-0
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------LG-YRG-V 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~~-~~~-~ 93 (391)
+|+ |.+++.+++-...|-+. .| .+-..+.-++|.+++ |.+..-+++..|||.++|+++.=- .+ ++. .
T Consensus 70 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~f~~SGsEA~E~AiklAr~y~~~~G~~~r~~ 146 (460)
T PRK06541 70 RAE-LAEAAAEQAGTLAFFPLWSYAHPPAIELAERLAALA--PGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHK 146 (460)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 899-999999999757875677557879999999999748--88869899708748999999999999999619998618
Q ss_pred EEEEECCHHHHHHHHHHHCCCC-----------CEEEEECCC-------CCCCC------HHHC------CCCCCEEEEE
Q ss_conf 7997073688888765323876-----------306740577-------76578------6767------8556579974
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQ-----------DVREFTAPY-------GSLPD------FSKV------DFDRDVVFVW 143 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~-----------~~~~~~~~~-------g~~~~------~~~~------~~~~~v~~~h 143 (391)
++...++|=++...-..--+.. .+.....+. +.... .+.+ +....++.+-
T Consensus 147 iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavI 226 (460)
T PRK06541 147 VISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRAPEHGDDPEAFGRWAADRIEEAIEFEGPDTVAAVF 226 (460)
T ss_pred EEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 99966871678657887518800037887889991676888644577678998899999999999999851998578998
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH
Q ss_conf 202420---22032------035025686148864011011025---4--5568579997001200176-6515445677
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP 208 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~ 208 (391)
.|...| +..+. ...+|+++++++|+|=|.+=.++- + +..++-=.+...-|+|++= .-++.++.++
T Consensus 227 ~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVqtGfGRtG~~fa~e~~gv~PDiv~~gKglg~G~~Pl~av~~~~ 306 (460)
T PRK06541 227 LEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASD 306 (460)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCH
T ss_conf 45777878865686899999999746479537667512078653373220168948951412231258877704674039
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
+..+.... ... ....++|+.-=|+ ...+...+|+.+++++ ..++.+++.+.+.+.++
T Consensus 307 ~i~~~~~~---~~~---------------~~~hg~T~~gnpl-a~aaa~avL~~i~~~~----l~~~v~~~G~~l~~~L~ 363 (460)
T PRK06541 307 RLVEPFLD---GKT---------------MFLHGYTFGGHPV-SAAVALANLDIFEREG----LLDHVRDNEPAFRATLE 363 (460)
T ss_pred HHHHHHCC---CCC---------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHH
T ss_conf 99876526---885---------------3135767888989-9999999999998657----99999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCEEE-EEE-CCCCCCCC-CHHHHHHHHHH-HHHHHHHCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 479716766882003653178-982-47310113-73456788899-999888628287266556767505686158889
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSIC-MKI-VDSDIASL-DINSQKSFCKS-MLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVE 364 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~-~~~-~d~~~~~~-~~~~~~~~~~~-~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~ 364 (391)
.+.- .+.+. +.|...... +.+ .|...... +........++ +...+.+.|.++...+. -+..+|+.--=.++
T Consensus 364 ~l~~-~p~v~--dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~~--~~~virl~PPL~it 438 (460)
T PRK06541 364 KLLD-LPIVG--DVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDR--GDPVVQLAPPLISG 438 (460)
T ss_pred HHHC-CCCEE--EEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCC--CCCEEEEECCEECC
T ss_conf 9746-99778--7410773899995457654566764677899999999999978959974589--99889997893378
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999
Q gi|254780153|r 365 KEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 365 ~~dv~~L~~aLe~~~~~~k~ 384 (391)
.++++.+++.||.++.++.-
T Consensus 439 ~~eid~~l~~l~~aL~e~~~ 458 (460)
T PRK06541 439 QEEFDEIEAILRSVLTEAWR 458 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999996
No 155
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=99.15 E-value=6.1e-08 Score=69.89 Aligned_cols=313 Identities=15% Similarity=0.062 Sum_probs=160.6
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CC-CC-E
Q ss_conf 9689999863210365328988999-9999999999996889985799974873489998753205-------78-97-0
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GY-RG-V 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~-~~-~ 93 (391)
+|+ |.+++.+++-...|.+.-|.. --.+.-+.|.++.. ...+|+ +..|||.++|+++.=.. ++ +. .
T Consensus 58 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L~~~~~--~~~~v~-f~~SGsEAvE~AlKlAr~y~~~~G~~~~k~~ 133 (408)
T PRK04612 58 DPD-LVAALTEQAGKLWHTSNVFFSAPPLKLAEELVTASR--FAEKVF-LCNSGTEANEAAIKLVRKWASSQGRPADKRV 133 (408)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC--CCCEEE-ECCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 899-999999998652576675226589999999972268--876699-7187468999999999999873288777769
Q ss_pred EEEEECCHHHHHHHHHHHCCCCCEEE---------EECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------E
Q ss_conf 79970736888887653238763067---------405777657867678556579974202420---22032------0
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQDVRE---------FTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------V 155 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------~ 155 (391)
.+...++|-++........+...... ...+++....++..-...+++.+-.|...| +..+. .
T Consensus 134 ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~~~~d~~~le~~~~~~~iAAvivEPi~g~gG~~~~~~~yl~~l 213 (408)
T PRK04612 134 IVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARV 213 (408)
T ss_pred EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 99985852598767422567843346888998852543667499999715699789999978678888306899999999
Q ss_pred EEECCCCCCEEEEEECCH-HHH--CCCCCC--CC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 350256861488640110-110--254556--85--79997001200176651544567788876541144577831232
Q gi|254780153|r 156 GFIPESREGLVICDATSA-VFA--RHIDFN--KL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 156 ~~~~~~~~~llivD~vSs-~g~--~p~d~~--~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
..+|+++++++|+|=|.+ ||- .-+-.+ ++ |++ ..-|+|++===++.++.+++..+...
T Consensus 214 ~~lc~~~gillI~DEV~TGfGRtG~~fa~~~~~v~PDii--~~gKglg~G~Pl~av~~~~~i~~~~~------------- 278 (408)
T PRK04612 214 RALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIV--TLAKALGGGFPIGAMLAGPKVAETMQ------------- 278 (408)
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEE--EEEHHHCCCCCEEEEEECHHHHHHCC-------------
T ss_conf 999975694698501224788676203555128999989--97232238876289998688885146-------------
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI 308 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v 308 (391)
....++|+..-|+ ...+...+|+.+++++ + ..+.+++.+.+.+.+.+..--.+.+. +.|....+
T Consensus 279 ---------~~~h~~T~~gnpl-a~aaala~L~~i~~~~-l---~~~~~~~g~~l~~~L~~l~~~~~~i~--~vRG~GLm 342 (408)
T PRK04612 279 ---------FGAHGTTFGGNPL-AAAVARVALRKLASPQ-I---AANVARQSAALRAGLEALNAEFGVFA--QIRGRGLM 342 (408)
T ss_pred ---------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHHHCCCCEE--EECCCCEE
T ss_conf ---------8997888873599-9999999999998666-9---99999999999999999874079888--32204469
Q ss_pred E-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8-982473101137345678889999988862828726655676750568615888999999999999999999999
Q gi|254780153|r 309 C-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 309 ~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
. +.+.+.. ......+...+.++|+++...+ ++.+|+.--=.++.++|+.+++.|+.++...=+
T Consensus 343 ~giel~~~~---------~~~~~~i~~~~~~~Gll~~~~g----~~~irl~PPL~it~~eide~l~~l~~al~~~~a 406 (408)
T PRK04612 343 LGAVLAPAH---------AGQAGAILDLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALAAYVA 406 (408)
T ss_pred EEEEECCCC---------CCHHHHHHHHHHHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999954788---------6269999999997891993179----997999688338899999999999999999982
No 156
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.15 E-value=7e-08 Score=69.48 Aligned_cols=321 Identities=15% Similarity=0.074 Sum_probs=204.0
Q ss_pred CCCCCCC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCCCEEEEEE-CCHHHHH--HHHH
Q ss_conf 0365328--9889999999999999996889985799974873489998753205-7897079970-7368888--8765
Q gi|254780153|r 36 LLGRSHR--CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYRGVDVLAW-ESFGLGW--MSDI 109 (391)
Q Consensus 36 ~l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~~~~~~~~-g~~~~r~--~~~~ 109 (391)
.+ +||- .+...++=+.+-.+|..+.+...+ ||+++.++----+-..+.-|- .++..+++.. +.|-... ++-.
T Consensus 63 li-rsw~~a~~~W~~lp~~lgdklApLiGA~~~-Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~ 140 (407)
T COG3844 63 LI-RSWNKAKADWFDLPERLGDKLAPLIGARAG-EVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGL 140 (407)
T ss_pred HH-HHHCCCCCCHHHCHHHHHHHHHHHHCCCCC-CEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCH
T ss_conf 35-432025886322536777776443168878-4697278516799999998466788559964588888513431236
Q ss_pred HHCCC--CCEEEEECCCCCCCCHHHCCCC-CCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCC--CC
Q ss_conf 32387--6306740577765786767855-657997420242022032035--02568614886401101102545--56
Q gi|254780153|r 110 RQLSL--QDVREFTAPYGSLPDFSKVDFD-RDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHID--FN 182 (391)
Q Consensus 110 ~~~~~--~~~~~~~~~~g~~~~~~~~~~~-~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d--~~ 182 (391)
++..+ .++.....|. ...+.+... ..|.+.|+.--||-..+..++ ++|.++++++.|-.-|.|+.|+| -+
T Consensus 141 ~~~~~~~~~~~~~~~P~---~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~ 217 (407)
T COG3844 141 ADLLGIGYDLEGVIAPR---ALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAA 217 (407)
T ss_pred HHHHCCCCCCEEEECHH---HHHHHHCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCEEEEEHHCCCCCCCEEECCC
T ss_conf 66615654513432727---788750465579984563444341223889999887458647762011257765110346
Q ss_pred CCEEEEECCHHCC-CCCCCCEEEEECHHHHHHHHHCCCCCCCC-CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8579997001200-17665154456778887654114457783-123200112321033478644666448899999999
Q gi|254780153|r 183 KLDVVTFSAQKVL-GGEAGFGIIILSPASVERLEKYVPSWPLP-KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL 260 (391)
Q Consensus 183 ~iDv~~a~sQK~l-~~ppGl~~v~~s~~al~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l 260 (391)
+.|..+.++-|-| +||.+.+++.+.++-.++.......|+-+ +-|.+...........+ -.-.||||....++.-+|
T Consensus 218 gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~r-f~~gt~~V~s~aal~~aL 296 (407)
T COG3844 218 GADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARR-FLCGTQPVLSLAALEGAL 296 (407)
T ss_pred CCCEEEEEECEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC-EEECCCCHHHHHHHHHHH
T ss_conf 7874410100002579997206886102245444533343577885012320376765101-220782265667774013
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 862010318999999997799999998747971676----6882003653178982473101137345678889999988
Q gi|254780153|r 261 LWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL----AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 261 ~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~----~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
+.+-+. ++....+++-.....+-+-++++-..+++ +.+.+.|.. -+.+..+ ....+..+|
T Consensus 297 Difa~~-~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGs-qvS~~hp--------------~~~~V~qaL 360 (407)
T COG3844 297 DIFADV-DITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGS-QVSLYHP--------------HGYQVMQAL 360 (407)
T ss_pred HHHHHC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCCC-EEEEECC--------------CHHHHHHHH
T ss_conf 465533-789998765678999999988415667717846613543366-0357368--------------689999999
Q ss_pred HHCCEEECCCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8628287266556767505686158-889999999999999999999
Q gi|254780153|r 337 EKEEIAYDIGSYRDAPLGLRVWVGV-TVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 337 ~~~g~~~~~~~~r~~~~~~RIg~~g-~i~~~dv~~L~~aLe~~~~~~ 382 (391)
-..|++.+ +| .+..+|.|.-+ ++.-+||=..+++|+.++.+.
T Consensus 361 i~rGVigD---~R-~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 361 IDRGVIGD---FR-EPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HHCCCCCC---CC-CCCEEEECCCCCEECHHHHHHHHHHHHHHHHHH
T ss_conf 97384133---56-887356427531111658999999999999752
No 157
>PRK09276 aspartate aminotransferase; Provisional
Probab=99.15 E-value=1.1e-07 Score=68.15 Aligned_cols=316 Identities=11% Similarity=0.056 Sum_probs=167.8
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHHHHH
Q ss_conf 8868887768-968999986321036-5328---98899999999999999968899--857999748734899987532
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPE--NYRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~--~y~v~~l~GsgT~~~ea~~~n 86 (391)
.+|+-|=-.. +|..+++++...+-. ..|+ +.-..++-+.+.+.+++-++..- +.+| +.+.|++.++..++..
T Consensus 34 i~l~~G~pd~~~p~~i~~al~~a~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~v-v~t~Ga~~al~~~~~~ 112 (385)
T PRK09276 34 ISLGIGDPDMPTPKHIVEAMKKAAEDPANHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEV-ISLIGSKEGIAHIPLA 112 (385)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCCHHHHHHHHHH
T ss_conf 889799899998999999999998087776659972719999999999999829876867769-9878844999999999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf 0578970799707368888876532387630674--057776578676785-----565799742024202203203---
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--- 156 (391)
++++||.+++..=.|..- ..+.+..+..+..+ ....+..+++++++. .+.+.++.=..-||...+..+
T Consensus 113 l~~pGD~Vli~~P~Y~~y--~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~~~~~~k~iil~~P~NPTG~v~s~~~l~~ 190 (385)
T PRK09276 113 FVNPGDYVLVPDPGYPVY--AIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVARKAKLMFINYPNNPTGAVADLEFFEK 190 (385)
T ss_pred HCCCCCEEEECCCCCCHH--HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
T ss_conf 739999899888866205--999998699785068666679857999999751016729998999898551111889999
Q ss_pred --EECCCCCCEEEEEECCHHH---HC-CC---CC---CCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCC
Q ss_conf --5025686148864011011---02-54---55---6857999700120017665--1544567788876541144577
Q gi|254780153|r 157 --FIPESREGLVICDATSAVF---AR-HI---DF---NKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 157 --~~~~~~~~llivD~vSs~g---~~-p~---d~---~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~ 222 (391)
.+|.+++..+|.|-+=+-. .. +. .. ....+.+.|.-|.++ .|| +|.++.+++.+++......
T Consensus 191 l~~la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~l~~~~~--- 266 (385)
T PRK09276 191 VVDFAKKYDIIVCHDNAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYN-MTGWRIGFAVGNADLIAGLGKVKS--- 266 (385)
T ss_pred HHHHHCCCCCEEEEHHHHHHHCCCCCCCCCHHHCCCCCCCCCEECCCCCCCC-CCCCEEEEEECCHHHHHHHHHHHH---
T ss_conf 9876325575697544422210388888776553454244303046545568-876207999759999999999997---
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
.....+ +...-++...+++.- +.-++.+.+.++++.+.+.+.+...+ +....++
T Consensus 267 -------------------~~~~~~-~~~~q~a~~~al~~~--~~~~~~~~~~~~~rr~~~~~~L~~~g-~~~~~p~--- 320 (385)
T PRK09276 267 -------------------NVDSGV-FQAIQEAAIAALNGP--QDVVEELRAIYQERRDILVEGLNSLG-WEVEKPK--- 320 (385)
T ss_pred -------------------HCCCCC-HHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC---
T ss_conf -------------------655771-099999999998486--99999999998999999999998769-8662688---
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 365317898247310113734567888999998-886282872665-5676750-5686158889999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+..-+-+.+++.. + ..++... +.+.|+++--|. +...+.+ +|++. ..+.+.++.-++-|+
T Consensus 321 -gg~~~w~~l~~~~----~-------~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~--a~~~e~l~eal~Rl~ 383 (385)
T PRK09276 321 -ATFYVWAPVPKGY----T-------SAEFATLLLDKAGIVVTPGNGFGTAGEGYFRIAL--TVPDERIEEAVERIK 383 (385)
T ss_pred -EEEEEEEECCCCC----C-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEE--ECCHHHHHHHHHHHH
T ss_conf -5779978899998----9-------8999999998199999887421889988699997--599999999999984
No 158
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.15 E-value=1.2e-07 Score=67.94 Aligned_cols=316 Identities=11% Similarity=0.042 Sum_probs=166.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCCCEE
Q ss_conf 968999986321036532898--8999999999999999688998579997487348999875320------5-789707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYRGVD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~~~~ 94 (391)
+|+ |.+++.+++-..+|-.. -..+.-.+.-++|.++. |.+..-+|+..||+.|+|+++.=- - .++.++
T Consensus 61 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~vff~~sGSEAvE~AlKlAr~y~~~~g~~r~~i 137 (428)
T PRK07986 61 HPQ-LNAAMKSQIDAMSHVMFGGITHQPAIELCRKLVAMT--PQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRF 137 (428)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 699-999999999757870368867789999999999848--88758699648628999999999999999709986449
Q ss_pred EEEECCHHHHHHHHHHHCC----------C--CCEEEEECCCCCC------CCHHHC-----CCCCCEEEEEEECC----
Q ss_conf 9970736888887653238----------7--6306740577765------786767-----85565799742024----
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLS----------L--QDVREFTAPYGSL------PDFSKV-----DFDRDVVFVWNGTT---- 147 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~----------~--~~~~~~~~~~g~~------~~~~~~-----~~~~~v~~~h~ETs---- 147 (391)
+...++|=++......--+ + ........+.... -+..++ +....++.+-.|..
T Consensus 138 i~~~~syHG~T~gals~t~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAviiEPi~qg~ 217 (428)
T PRK07986 138 LTFRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGA 217 (428)
T ss_pred EEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 99838738997122573168644434557779985013788766565557123999999997478870189983244676
Q ss_pred CCEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHH
Q ss_conf 2022032------035025686148864011011025---4--5568579997001200176-65154456778887654
Q gi|254780153|r 148 SGVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLE 215 (391)
Q Consensus 148 tGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~ 215 (391)
-|+..|. ...+|+++++++|+|=|.+=.++- + +..++.=.+...-|+|++= .=++.++.+++..+...
T Consensus 218 gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiit~gKgl~gG~~Pl~av~~~~~i~~~~~ 297 (428)
T PRK07986 218 GGMRIYHPEWLKRIRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETIS 297 (428)
T ss_pred CCCEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHCC
T ss_conf 98353899999999999986396366110002788667865000047899889975201388775389998699996305
Q ss_pred HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 11445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r 216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN 295 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~ 295 (391)
.... . . ...++|+.--|+ ...+..++|+.++++ ++ ..+.+++.+.+.+.++.+.. .+
T Consensus 298 ~~~~-~----~------------f~hg~Tf~Gnpl-a~Aaa~a~L~~i~~~-~l---~~~~~~~g~~l~~~L~~L~~-~~ 354 (428)
T PRK07986 298 NGEA-G----C------------FMHGPTFMGNPL-ACAVANASLSLLESG-DW---QQQVAAIESQLREELAPLRD-AE 354 (428)
T ss_pred CCCC-C----C------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CH---HHHHHHHHHHHHHHHHHHHC-CC
T ss_conf 6876-5----4------------101778999989-999999999999865-69---99999999999999998755-99
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 66882003653178982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r 296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
.+.+-..+.. ...+....|.. .+.+...+.++|+++.. .++.+|+.--=.+++++++.++++|
T Consensus 355 ~V~dVRg~Gl-~~~ve~~~p~~-----------~~~~~~~~~~~Gll~~~-----~g~~i~l~PPLiit~~ei~~~~~~l 417 (428)
T PRK07986 355 MVADVRVLGA-IGVVETTRPVN-----------MAALQRFFVEQGVWIRP-----FGKLIYLMPPYIILPEQLQRLTAAV 417 (428)
T ss_pred CEEEEEECCE-EEEEEECCCCC-----------HHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 5787742672-89998079453-----------99999999979948974-----5999999899149999999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780153|r 376 RWVFYFQ 382 (391)
Q Consensus 376 e~~~~~~ 382 (391)
|.++.++
T Consensus 418 ~~al~e~ 424 (428)
T PRK07986 418 NRAVQDE 424 (428)
T ss_pred HHHHHHH
T ss_conf 9999755
No 159
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.15 E-value=3e-08 Score=71.79 Aligned_cols=312 Identities=16% Similarity=0.048 Sum_probs=170.6
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHH---HHCCCCCEE
Q ss_conf 98899999999999999968899857999748734899987532057-89707997073688888765---323876306
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YRGVDVLAWESFGLGWMSDI---RQLSLQDVR 118 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~~~~~~~~g~~~~r~~~~~---~~~~~~~~~ 118 (391)
|.=..+++-+.++.|.+|.+.+-- -.=+.-+||++.||+.+-.-. +++++++.....-.. ...+ ++..+.++.
T Consensus 107 sQG~Lq~l~e~Q~~l~eLtGmd~~--nasl~dga~a~~ea~~ma~r~~~r~~vlv~~s~hP~~-~~v~~t~a~~~g~~vv 183 (449)
T PRK00451 107 SQGTLQAIFEYQTMICELTGMDVA--NASMYDGATALAEAALMAVRITGRNKVLVSGAVHPEY-REVLKTYLKGQGIEVV 183 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH-HHHHHHHCCCCCCEEE
T ss_conf 139999999999999998598746--7787747789999999998642687399779878427-9999863015784279
Q ss_pred EEECCCCCCCCHHHCCC----CCCEEEEEEECCCCEEECCEEE--ECCCCCCEEE--EEECCHHHHC--CCCCCCCEEEE
Q ss_conf 74057776578676785----5657997420242022032035--0256861488--6401101102--54556857999
Q gi|254780153|r 119 EFTAPYGSLPDFSKVDF----DRDVVFVWNGTTSGVCVPDVGF--IPESREGLVI--CDATSAVFAR--HIDFNKLDVVT 188 (391)
Q Consensus 119 ~~~~~~g~~~~~~~~~~----~~~v~~~h~ETstGv~~~~~~~--~~~~~~~lli--vD~vSs~g~~--p~d~~~iDv~~ 188 (391)
.+....+-..|+++++. .....++.|=+..|+.-+..++ ++|+.+++++ +|..| ++.. |-| +++|+++
T Consensus 184 ~v~~~~~g~~Dl~~L~~~~~~~~A~vmi~~Pnt~G~~edi~~i~~~vh~~g~l~~~~~n~~a-Lg~l~~PGe-~GaDIvv 261 (449)
T PRK00451 184 EVPYPEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVVVDPVS-LGLLKPPGE-YGADIVV 261 (449)
T ss_pred EECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECHHH-HHCCCCCCC-CCCCEEE
T ss_conf 84577566668899986417875899985588777531699999999865974999716788-607678443-4540686
Q ss_pred E-----CCHHCCCCCCCCEEEEECHHHHHHHHHCC------CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 7-----00120017665154456778887654114------457783123200112321033478644666448899999
Q gi|254780153|r 189 F-----SAQKVLGGEAGFGIIILSPASVERLEKYV------PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYI 257 (391)
Q Consensus 189 a-----~sQK~l~~ppGl~~v~~s~~al~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~ 257 (391)
. +..|++||| +.+++.++++...++-..- ..+.....+.+...-+. -.+..-|-|--.-..+.++.
T Consensus 262 g~~q~lg~p~~fGGP-~~G~~a~~~~l~r~lPgriVG~t~D~~G~~~y~LtLqtREQh--IrReKAtSnIctnq~l~a~~ 338 (449)
T PRK00451 262 GEGQPLGIPLSFGGP-YLGFFATRKKLVRQMPGRLVGETVDVDGKRGFVLTLQAREQH--IRREKATSNICTNQALCALA 338 (449)
T ss_pred ECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHH--CCCCCCCCCCCCCHHHHHHH
T ss_conf 247666778667899-878705565001028987667213678861201134553222--34555546666422788999
Q ss_pred HH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99--9862010318999999997799999998747971676688200365317898247310113734567888999998
Q gi|254780153|r 258 DA--LLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 258 ~~--l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
.. +.++= ..|+..+-++.-.+++.+.+.+.+.+++......+-.. -.++.++. ...++.++
T Consensus 339 a~~Yi~~lG-~~GLk~va~~a~~nAnyl~~~L~~~~~~~~~~~~~~f~---Efv~~~~~-------------~a~~i~k~ 401 (449)
T PRK00451 339 ATIYMSLLG-KEGLREVAEQNHQKAHYLAERLAEIGGVEVLFNGPFFN---EFVVRLPK-------------PAEEVNEA 401 (449)
T ss_pred HHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEE---EEEEECCC-------------CHHHHHHH
T ss_conf 999999759-76699999999999999999987379834168998025---89997898-------------89999999
Q ss_pred HHHCCEEEC--CCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 886282872--665-56767505686158889999999999999999
Q gi|254780153|r 336 LEKEEIAYD--IGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 336 l~~~g~~~~--~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
|.+.|+.-+ +.. +...+..+=|..==..+.+|+|+|+++|..+.
T Consensus 402 L~~~gi~~g~~lt~~~p~~~~~lmi~~TEt~sk~dlD~~v~al~eil 448 (449)
T PRK00451 402 LLEKGILGGYDLGRYYPELGNSLLVAVTELRTKEDIDALVEALGEVL 448 (449)
T ss_pred HHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99769978988544277889979997078999999999999999986
No 160
>PRK08466 consensus
Probab=99.15 E-value=3.2e-07 Score=65.29 Aligned_cols=319 Identities=10% Similarity=0.058 Sum_probs=165.9
Q ss_pred CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-----C-CCCC-EE
Q ss_conf 96899998632103653289--88999999999999999688998579997487348999875320-----5-7897-07
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-----L-GYRG-VD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-----~-~~~~-~~ 94 (391)
+|+ |.+++.+++-...|-+ .-..+...+.-++|.+++ |.+..-+++..|||.|+|+++.=- . +.+. .+
T Consensus 64 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~f~~sGseA~E~AiKlAr~y~~~~g~~k~~i 140 (430)
T PRK08466 64 NPY-INEAIKKQIDELEHVILAGFTHEPIIKLSERLCELT--PRGLNKCFYADNGSSAIEVALKMSFHYHKNKGKKKSLF 140 (430)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 799-999999999657773457758779999999999857--88778799837719999999999999975226897589
Q ss_pred EEEECCHHHHHHHHHHHCCCC----------CEEEEEC--CCCCC---CCHHHCC-----CCCCEEEEEEEC-C--C-CE
Q ss_conf 997073688888765323876----------3067405--77765---7867678-----556579974202-4--2-02
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSLQ----------DVREFTA--PYGSL---PDFSKVD-----FDRDVVFVWNGT-T--S-GV 150 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~~----------~~~~~~~--~~g~~---~~~~~~~-----~~~~v~~~h~ET-s--t-Gv 150 (391)
+...++|=++...-.. ..+. ....... |.+.. .+++.++ ....++.+-.|. . . |+
T Consensus 141 is~~~~yHG~T~ga~s-~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~l~~~l~~~~~~iAAvI~EPiiqg~gg~ 219 (430)
T PRK08466 141 LSLSNSYHGETLGALS-VGDVALYKDTYKPLLLECLQTPVPKDDEAYQEALEALKRILEKHAEEICAFILEPLVQCAGNM 219 (430)
T ss_pred EEECCCCCCCCHHHHC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
T ss_conf 9964752688521102-578400246778877686115899971667888999999998589977799997876677997
Q ss_pred EECC------EEEECCCCCCEEEEEECCHHHHCCCC-----CCCC--EEEEECCHHCCCCC-CCCEEEEECHHHHHHHHH
Q ss_conf 2032------03502568614886401101102545-----5685--79997001200176-651544567788876541
Q gi|254780153|r 151 CVPD------VGFIPESREGLVICDATSAVFARHID-----FNKL--DVVTFSAQKVLGGE-AGFGIIILSPASVERLEK 216 (391)
Q Consensus 151 ~~~~------~~~~~~~~~~llivD~vSs~g~~p~d-----~~~i--Dv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~ 216 (391)
..+. ...+|+.+++++|+|=|.+=.++-=. ..++ |++ ..-|+|++= .=++.++.+++..+....
T Consensus 220 ~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PDiv--~~gK~l~gG~~Pisav~~~~ei~~~~~~ 297 (430)
T PRK08466 220 HMYSAEYLKEAIKLCHKYNIHIIFDEIAVGFGRTGTMFALEQCGISPDFL--CLSKGITGGYLPLSVVLTSDEIYNAFYA 297 (430)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCEE--EECCCCCCCCCCEEEEEECHHHHHHHHC
T ss_conf 68988999999999853596688731011787667620554169999889--8684101788774999985899987505
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391)
+... ......++|+.-=| ....+..++|+.+++++ ...+.+++.+.+.+.++... -.+.
T Consensus 298 --~~~~-------------~~~~~h~~T~~Gnp-la~aaala~L~~l~~~~----l~~~~~~~g~~l~~~L~~l~-~~~~ 356 (430)
T PRK08466 298 --PYEE-------------NKAFLHSHSYTGNA-LACAAANATLDIFEDEN----VIEKNQILSEFIQKELSRLE-KLDF 356 (430)
T ss_pred --CCCC-------------CCCEECCCCCCCCH-HHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHH-CCCC
T ss_conf --6555-------------66601265788897-99999999999999688----88999999999999999862-4997
Q ss_pred CCCCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 688200365317-8982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r 297 AVDETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 297 ~~~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
+. +.|..... .+.+.+.. ........+...+.++|+++.. .++.+|+.--=.++.+||+..+++|
T Consensus 357 v~--~vRg~Gl~~~iel~~~~-------~~~~~~~~i~~~~l~~Gll~~~-----~g~~l~~~PpL~it~eeid~~~~~l 422 (430)
T PRK08466 357 VG--NLRQCGMVFAFELLGTD-------TKERVGLFVFQKALKKGLLLRP-----LGNTIYFMPPYIITKEEIKKVIEVL 422 (430)
T ss_pred EE--EEEECCEEEEEEEECCC-------CCHHHHHHHHHHHHHCCEEEEC-----CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 57--88412538999984588-------5037999999999978938911-----4999999798588999999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780153|r 376 RWVFYFQK 383 (391)
Q Consensus 376 e~~~~~~k 383 (391)
|.+++++|
T Consensus 423 ~~al~elk 430 (430)
T PRK08466 423 EEIIKELK 430 (430)
T ss_pred HHHHHHHC
T ss_conf 99999739
No 161
>PRK06149 hypothetical protein; Provisional
Probab=99.14 E-value=2.6e-07 Score=65.85 Aligned_cols=321 Identities=14% Similarity=0.041 Sum_probs=171.7
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---CCCCCEEEEEECC
Q ss_conf 9689999863210365328988999999999999999688998579997487348999875320---5789707997073
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---LGYRGVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~~~~~~~~~~~g~ 100 (391)
+|+ |.+++++++--.+|-+--..+-+.+.-++|..++ |+.-..+|+..|||.|.|+++.=. .+..+.+...+++
T Consensus 601 hP~-v~~A~~~Q~~~L~~~s~~~~~~~~elAerL~~~~--P~~l~~vfF~nSGsEAnE~AlKlAr~~tGr~~iI~~~~ay 677 (972)
T PRK06149 601 HPR-MAAAAARQWSLLNTNSRFHYAAVAEFSERLAALA--PDGLDTVFLVNSGSEANDLAIRLAWAASGGRDVLSVLEAY 677 (972)
T ss_pred CHH-HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 999-9999999999745176636515999999999857--6562669850774999999999999962899779996870
Q ss_pred HHHHHHHHHHHCC------C----C-CEEEEECCCCCC-----CC-----HHH-------CC-CCCCEEEEEEECCCCE-
Q ss_conf 6888887653238------7----6-306740577765-----78-----676-------78-5565799742024202-
Q gi|254780153|r 101 FGLGWMSDIRQLS------L----Q-DVREFTAPYGSL-----PD-----FSK-------VD-FDRDVVFVWNGTTSGV- 150 (391)
Q Consensus 101 ~~~r~~~~~~~~~------~----~-~~~~~~~~~g~~-----~~-----~~~-------~~-~~~~v~~~h~ETstGv- 150 (391)
.|.-......... + . .+.....|...- .+ ... +. ....++.+-.|+..|.
T Consensus 678 HG~T~ga~a~s~~~~~~~~~~~~~p~~v~~~~~P~~yr~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~Aa~I~EPI~G~g 757 (972)
T PRK06149 678 HGWTVATDAVSTSIADNPQALTTRPDWVHPVESPNTFRGKFRGADSAADYLRDVVAQLEDLDARGRQLAGFICEPVYGNA 757 (972)
T ss_pred CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 88267889863343457667678998436606874456777886407899999999999997158966899995764777
Q ss_pred --EECC------EEEECCCCCCEEEEEECCHHHHCCCC-CC-----CC--EEEEECCHHCCCCCCCCEEEEECHHHHHHH
Q ss_conf --2032------03502568614886401101102545-56-----85--799970012001766515445677888765
Q gi|254780153|r 151 --CVPD------VGFIPESREGLVICDATSAVFARHID-FN-----KL--DVVTFSAQKVLGGEAGFGIIILSPASVERL 214 (391)
Q Consensus 151 --~~~~------~~~~~~~~~~llivD~vSs~g~~p~d-~~-----~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~ 214 (391)
..+. ...+|.++|.++|+|=|++=.++-=. +| ++ |++ ..-|.||+===+|.++.+++..+..
T Consensus 758 G~i~~P~gyl~~v~~~c~~~g~LlI~DEVQtG~GRtG~~Fwa~e~~gv~PDIv--t~aKglg~G~PlgAvv~~~eia~~f 835 (972)
T PRK06149 758 GGISLPDGYLRQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGNGHPLGAVITRREIAEAL 835 (972)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEE--EECCCCCCCCCCEEEEECHHHHHHH
T ss_conf 87379879999999999974978996132217785766300445429998779--8645555886647889749999765
Q ss_pred HHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 41144577831232001123210334786446664488999999998620103189999999977999999987479716
Q gi|254780153|r 215 EKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~ 294 (391)
. .. ...++|+.--|+ ...+...+|+.|++++ ..++.++..+.+.+.+.++..-.
T Consensus 836 ~---~~------------------g~~~sTfgGnPl-acAaalavL~vi~~e~----L~~na~~~G~~l~~~L~~L~~~~ 889 (972)
T PRK06149 836 E---AE------------------GYFFSSTGGSPV-SCAIGMAVLDVMREEK----LQENARRVGDHLKARLEALVDRH 889 (972)
T ss_pred C---CC------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 2---68------------------860058998989-9999999999998736----99999999999999999998619
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 76688200365317898247310113734567888999998886282872665567675056861588899999999999
Q gi|254780153|r 295 NLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 295 ~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~a 374 (391)
+.+.+-.-++.+.-.=.+.|+....-.. .....+...+.++|++++..|. -.+.+||---=.++.++++.++++
T Consensus 890 p~IgdVRG~GLm~GiElV~d~~t~~Pa~----~~~~~i~~~~~e~Gil~~~~G~--~~nVlki~PPL~i~~e~~D~~l~~ 963 (972)
T PRK06149 890 PLAGAVHGMGLYLGVELVRDRQTLEPAT----EETAAICDRLLELGVIMQPTGD--HLNILKIKPPLCTDRESADFFVDM 963 (972)
T ss_pred CCEEEEECCCCEEEEEEECCCCCCCCCH----HHHHHHHHHHHHCCEEEECCCC--CCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 9489862267289999701667689888----9999999999978958942789--888799808946769999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780153|r 375 LRWVFYF 381 (391)
Q Consensus 375 Le~~~~~ 381 (391)
||.++.+
T Consensus 964 l~~vL~E 970 (972)
T PRK06149 964 LDRVLTE 970 (972)
T ss_pred HHHHHHC
T ss_conf 9999855
No 162
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.14 E-value=7.9e-07 Score=62.81 Aligned_cols=323 Identities=16% Similarity=0.114 Sum_probs=171.0
Q ss_pred CCCCCC-CCCCCHHHHHHHHHHHC---CCCCCC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 886888-77689689999863210---365328--988999999999999999688998579997487348999875320
Q gi|254780153|r 14 PFFSSG-PCAKRPGWSLGILEGAL---LGRSHR--CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL 87 (391)
Q Consensus 14 ~~F~pG-P~~~~p~~v~~~~~~~~---l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl 87 (391)
.+|+-| |.--+|..+.+++...- .++++- .++..+.+.+ .+++ ++++-+-+=++++.|++.++..++..+
T Consensus 33 i~l~iG~Pd~~~P~~~~~a~~~~~~~~~~Y~~~~G~~~LReaia~---~~~~-~g~~~~~d~I~iT~Ga~~al~~~~~~l 108 (396)
T PRK07568 33 YHLNIGQPDIKTPEVFFEAIRNYDEEVLAYSHSAGIDSLREAFSK---YYKR-FNIDFDKDEIIVTNGGSEAILFALMAI 108 (396)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH---HHHH-HCCCCCHHEEEECCCHHHHHHHHHHHH
T ss_conf 888798899987699999998507378988998671999999999---9998-688988222898578069999999972
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC--CCCC-CCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf 57897079970736888887653238763067405--7776-578676785-----565799742024202203203---
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA--PYGS-LPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~--~~g~-~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--- 156 (391)
+++||.+++..=.|... . ...+..+..+..+.. +.|. .+++++++. .+.+.++.-..-||...+...
T Consensus 109 ~~pGD~Vlv~~P~y~~y-~-~~~~~~g~~~v~v~~~~e~g~~lp~~~~l~~~~~~~tk~ii~~~P~NPTG~v~s~~~~~~ 186 (396)
T PRK07568 109 CDPGDEIIVPEPFYANY-N-GFATSAGVKIVPVTTKIEEGFHLPKKEEIEKLITDKTKAILISNPGNPTGVVYTKEELRQ 186 (396)
T ss_pred CCCCCEEEEECCCCCCH-H-HHHHHCCCEEEECCCCHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 79989899938975325-9-999984987851676721188789699999747765749985899298875401578999
Q ss_pred --EECCCCCCEEEEEECCHH---HHCC-C---CCC---CCEEEEECCHHCCCCCCCCEE--EEEC-HHHHHHHHHCCCCC
Q ss_conf --502568614886401101---1025-4---556---857999700120017665154--4567-78887654114457
Q gi|254780153|r 157 --FIPESREGLVICDATSAV---FARH-I---DFN---KLDVVTFSAQKVLGGEAGFGI--IILS-PASVERLEKYVPSW 221 (391)
Q Consensus 157 --~~~~~~~~llivD~vSs~---g~~p-~---d~~---~iDv~~a~sQK~l~~ppGl~~--v~~s-~~al~~~~~~~~~~ 221 (391)
.+|..++.++|.|-+=+- .+.+ . ... +--+.+.|.-|.+ ++||+=+ ++.. +...+....
T Consensus 187 l~~la~~~~~~ii~De~Y~~l~y~g~~~~s~~~~~~~~~~vI~i~S~SK~~-~~~G~RiG~~v~~~~~~~~~~~~----- 260 (396)
T PRK07568 187 LADIAKEHDLFLISDEVYREFTYDGLKYTSAMNIEGIEDRVIIIDSVSKRY-SACGARIGSLITKNKELIKQAMK----- 260 (396)
T ss_pred HHHHHHHHCEEEECCCCHHHHEECCCCCCCHHCCCCCCCCEEEECCCCCCC-CCCHHHEEEEECCCHHHHHHHHH-----
T ss_conf 999998710667424535552208987757200556544225640455665-78405435553099999999999-----
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
. .++...+|+..-++...+|+.- +.-++.+.+.++++.+.+.+.+++.+++....++
T Consensus 261 ----------~---------~~~~~~~~~~~Q~aa~~~l~~~--~~~~~~~~~~y~~rrd~~~~~L~~~~g~~~~~P~-- 317 (396)
T PRK07568 261 ----------L---------CQARLCPPTLEQIGAAALLNTP--ESYFKEVREEYEKRRDILYEGLNKIPGVVCEKPT-- 317 (396)
T ss_pred ----------H---------HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC--
T ss_conf ----------7---------1214789779999999998587--7999999999999999999999707997867888--
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH--HHHCCEEECCCC--CCC--CCCE-EEEECCCCCCHHHHHHHHHH
Q ss_conf 0365317898247310113734567888999998--886282872665--567--6750-56861588899999999999
Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF--LEKEEIAYDIGS--YRD--APLG-LRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~--~r~--~~~~-~RIg~~g~i~~~dv~~L~~a 374 (391)
+..-+-.+++.. + ...+...+.+- +..+++++--|. |.. .|++ +|++. ..++++++.-++.
T Consensus 318 --Ggfyl~~~lp~~-----~---~~~f~~~ll~~~~~~~~~V~v~PG~~F~~~~g~g~~~iRls~--~~~~e~l~ea~~R 385 (396)
T PRK07568 318 --GAFYIIAKLPVD-----D---AEDFAKWMLTDFEYNGETVMVAPASGFYATPGLGKDEIRIAY--VLEKEDLRRAMEI 385 (396)
T ss_pred --EEEEEEEECCCC-----C---HHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCEEEEEE--CCCHHHHHHHHHH
T ss_conf --578999958999-----9---999999999962124886999776341689989999699997--1999999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780153|r 375 LRWVFYFQK 383 (391)
Q Consensus 375 Le~~~~~~k 383 (391)
|+.++++-|
T Consensus 386 l~~~l~~~~ 394 (396)
T PRK07568 386 LKKALEAYN 394 (396)
T ss_pred HHHHHHHHC
T ss_conf 999999852
No 163
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.14 E-value=5.6e-09 Score=76.46 Aligned_cols=304 Identities=17% Similarity=0.129 Sum_probs=165.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+-+... .+ ..+||-+|..+++++++++|+.+++...-||. ++........+.+++.+
T Consensus 62 gnPT~~~lE~~l---a~LEg~~~---a~-~~sSGmaAis~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~v 134 (431)
T PRK08248 62 MNPTNDVFEKRI---AALEGGVG---AL-AVSSGQAAVTYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFV 134 (431)
T ss_pred CCHHHHHHHHHH---HHHHCCCC---EE-EECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf 886799999999---99839984---89-954699999999999737799899727864888999874232388799998
Q ss_pred ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEECCE---E--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 05777657867678--556579974202420220320---3--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVPDV---G--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~~~---~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. ++++++ .....-+++.||.+--...+. . .+++.+++++|||-+ |-+...|++. ++|+++-|.
T Consensus 135 D~~-----d~~~~~~~i~~~Tkli~~EsPsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDivvhS~ 208 (431)
T PRK08248 135 DPS-----DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVADIAHRHHIPLIVDNTFASPYLLRPIEF-GADIVVHSA 208 (431)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHCCHHHH-CCCEEEEEC
T ss_conf 997-----75779975377745999604899987422789999999776985998667530321583452-898899966
Q ss_pred HHCCCCCCCC--EEEEECHHH-HHHH---HHCCCCCCCCCHHHC--C---------HHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 1200176651--544567788-8765---411445778312320--0---------112321033478644666448899
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPAS-VERL---EKYVPSWPLPKIFRM--V---------KGGRVMEGLFCGETINTPSLLCIE 254 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~a-l~~~---~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~TP~v~~i~ 254 (391)
-|-++|-+-+ |+|+.+.+. |... .....+ .+.+..+ . ...+.......|. +++-+.-|
T Consensus 209 TKYi~GHsDvlgG~vv~~~~~~w~~~~r~~~~~~~--d~~~~~~~~~~~~g~~~~~~~~r~~~~~~~G~---~~sp~da~ 283 (431)
T PRK08248 209 TKFIGGHGTSIGGVIVDSGKFDWAGSGKFPGLTEP--DPSYHGLVYTDAVGEAAYITKARVQLLRDLGA---ALSPFNAF 283 (431)
T ss_pred CEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC--CHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC---CCCHHHHH
T ss_conf 51236887535479970675440002345323578--65533532687661789999999999985277---78806779
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCCC--------CC-CCEEEEEECCCCCCCC
Q ss_conf 99999986201031899999999779999999874797167-----6688200--------36-5317898247310113
Q gi|254780153|r 255 DYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-----LAVDETT--------RS-NTSICMKIVDSDIASL 320 (391)
Q Consensus 255 al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-----~~~~~~~--------rS-~~~v~~~~~d~~~~~~ 320 (391)
.+...| ..+.-|.+||.+++..+-+|+++++.... +...|.+ ++ -..++|.+.+..
T Consensus 284 L~lRGL------rTL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~~g~G~~~sf~l~~~~---- 353 (431)
T PRK08248 284 LLLQGL------ETLHLRMERHSENALAVAKFLEEHPAVESVSYPGLPSHPSYELAKKYLPKGQGAILTFEIKGGV---- 353 (431)
T ss_pred HHHCCC------CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH----
T ss_conf 997268------9799999999988999999998489957798999999958999998679996069999972889----
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------C-CEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 7345678889999988862828726655676----------------------7-5056861588899999999999999
Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------P-LGLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~-~~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
+. ...+...|.--..+..+|+..+. . .-+|+++| .||++.|++=|+.
T Consensus 354 --~~----~~~f~~~L~lf~~a~SlGg~eSLi~~pa~~th~~~~~~~r~~~Gi~~~liRlSVG----lEd~eDLi~DL~q 423 (431)
T PRK08248 354 --EA----GKKLIDSVKLFSHLANVGDSKSLIIHPASTTHEQLSEEEQRAAGVTPGLVRLSVG----TESIDDIIEDLRQ 423 (431)
T ss_pred --HH----HHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHH
T ss_conf --99----9999983783611326676571645764355210899999866979495999941----0999999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780153|r 378 VFYFQKI 384 (391)
Q Consensus 378 ~~~~~k~ 384 (391)
|+.++++
T Consensus 424 AL~~a~~ 430 (431)
T PRK08248 424 AIEQSQA 430 (431)
T ss_pred HHHHHCC
T ss_conf 9997237
No 164
>PRK06062 hypothetical protein; Provisional
Probab=99.14 E-value=1.4e-07 Score=67.58 Aligned_cols=327 Identities=12% Similarity=0.089 Sum_probs=165.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC--CCCCCEEEEEECC
Q ss_conf 96899998632103653289889-99999999999999688998579997487348999875320--5789707997073
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL--LGYRGVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl--~~~~~~~~~~~g~ 100 (391)
+|+ |.+++.+++-...|-++.| .+...+.-+.|.+++ |.+..-+++..||+.++|+++.=. ...+..++...++
T Consensus 54 ~p~-i~~Ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~--p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~ 130 (434)
T PRK06062 54 HPK-VVAAIQEQAARLCTVAPAHANDARSEAARLIAERA--PGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRS 130 (434)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 799-99999999975476467524599999999999747--777587998378438999999999985299837664046
Q ss_pred HHHHHHHHHHHC----------CCCCEEEEECCC------CCCCC-------HHHC------CCCCCEEEEEEECCCC--
Q ss_conf 688888765323----------876306740577------76578-------6767------8556579974202420--
Q gi|254780153|r 101 FGLGWMSDIRQL----------SLQDVREFTAPY------GSLPD-------FSKV------DFDRDVVFVWNGTTSG-- 149 (391)
Q Consensus 101 ~~~r~~~~~~~~----------~~~~~~~~~~~~------g~~~~-------~~~~------~~~~~v~~~h~ETstG-- 149 (391)
|=++...-..-- ....+.....|. ....+ ++.+ +....++.+-.|...|
T Consensus 131 yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~~iAAvivEPiqg~g 210 (434)
T PRK06062 131 YHGGTGTAINLTGDPRRWPNDTGNAGVVHFFGPFLYRSSFHATTEEEECERALAHLERVIALEGPSTIAAIVLESVPGTA 210 (434)
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
T ss_conf 67886520784068201468888899534158876676677888689999999999999985199977999947867889
Q ss_pred -EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHH
Q ss_conf -22032------035025686148864011011025---4--5568579997001200176-651544567788876541
Q gi|254780153|r 150 -VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEK 216 (391)
Q Consensus 150 -v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~ 216 (391)
+..+. .+.+|+++++++|+|=|.+=.++- + +..++.-.+...-|+|++= .=++.++.+++..+....
T Consensus 211 G~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~e~~gv~PDiv~~gK~l~gG~~Plsav~~~~~i~~~~~~ 290 (434)
T PRK06062 211 GIMVPPPGYLAGVRELCDRHGIVFIADEVMAGFGRTGKWFAIEHFDVVPDLITFAKGVNSGYVPLGGVAISEAIADTFAD 290 (434)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHCCCCCCEEEEEECHHHHHHHCC
T ss_conf 98668767876899999985950674643227876666421005897976210103314887761788745999987422
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH-HH-HHHHHHHHHHHCCCCC
Q ss_conf 144577831232001123210334786446664488999999998620103189999999-97-7999999987479716
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERC-NA-NAAVLFQFIQENDWIE 294 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~-~~-~a~~l~~~i~~~~~~~ 294 (391)
.. ...++|+.--|+ ...+...+|+.++++ ++-...++. ++ ..+.+.+..+++
T Consensus 291 ----~~----------------~~~g~T~~Gnpl-a~Aaa~a~L~~i~~~-~l~~~~~~~G~~~l~~~L~~l~~~~---- 344 (434)
T PRK06062 291 ----RP----------------YPGGLTYSGHPL-ACAAAVATINAMEEE-GIVENAARIGAEVLGPGLRELAERH---- 344 (434)
T ss_pred ----CC----------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_conf ----67----------------567878889879-999999999999735-8999999999999999999998658----
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 7668820036531789824731011373--45678889999988862828726655676750568615888999999999
Q gi|254780153|r 295 NLAVDETTRSNTSICMKIVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLC 372 (391)
Q Consensus 295 ~~~~~~~~rS~~~v~~~~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~ 372 (391)
+.+.+-.-++.+.-.-.+.++....... .........+...+.+.|++.... ++.+|+.--=.++.+||+..+
T Consensus 345 p~v~~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-----gn~irl~PpL~it~~eid~~l 419 (434)
T PRK06062 345 PSVGEVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGL 419 (434)
T ss_pred CCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----CCEEEEECCCCCCHHHHHHHH
T ss_conf 986888616626999982264435555544332799999999999799278335-----998999789238899999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 373 DWLRWVFYFQKI 384 (391)
Q Consensus 373 ~aLe~~~~~~k~ 384 (391)
+.||.++..+-+
T Consensus 420 ~~l~~al~~~~a 431 (434)
T PRK06062 420 AILDAALAVADA 431 (434)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999998765
No 165
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.13 E-value=1.6e-07 Score=67.20 Aligned_cols=283 Identities=18% Similarity=0.153 Sum_probs=159.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH--HHHHHHCCCCCEEEE
Q ss_conf 988999999999999999688998579997487348999875320578970799707368888--876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW--MSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~--~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++. |..+=+.. .+ +..+||-+|+.+++++++++|+.+++...-||.-+ ........+.+++.+
T Consensus 59 ~nPT~~~lE~~---la~LEg~~---~a-~~~sSGmaAi~~~ll~~l~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~~~~v 131 (391)
T PRK08133 59 TNPTVRMFQER---LAALEGAE---AC-VATASGMAAILSVVMALLQAGDHVVSSRSLFGSTLSLFEKIFARFGIETTFV 131 (391)
T ss_pred CCHHHHHHHHH---HHHHHCCC---EE-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEC
T ss_conf 88669999999---99980997---59-9965889999999998457999899678974538999998741078444467
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC---CEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--565799742024202203---203--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP---DVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~---~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+. .+++.++. .+...+++.||.+--... +.. .+++++++++|||-+ +-+...|++ .++|+++-|.
T Consensus 132 d~-----~d~~~~~~ai~~~T~lv~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~atP~~~~Pl~-~GaDivvhS~ 205 (391)
T PRK08133 132 DL-----TDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPLK-LGADVVIHSA 205 (391)
T ss_pred CC-----CCHHHHHHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHH-HCCCEEEEEC
T ss_conf 98-----79999997458784599997899998665553999999875587599878976524446566-1883799966
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|-|+|-.-+ |.|+.+++.+.+. . ..+ .. ..|. +++-+.-|.+...| ..+
T Consensus 206 TKyi~GHsD~lgG~v~~~~~~~~~~--~---------~~~---~~-----~~G~---~lsP~~a~l~lrGL------~TL 257 (391)
T PRK08133 206 TKYLDGQGRVLGGAVVGSKEFIMEE--V---------FGF---LR-----TAGP---TLSPFNAWVFLKGL------ETL 257 (391)
T ss_pred CCEECCCCCCEEEEEECCHHHHHHH--H---------HHH---HH-----HCCC---CCCCHHHHHHHCCC------CCH
T ss_conf 6030488874448996367999999--9---------999---99-----7488---88932778986047------769
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
.-|.+||.+++..+-+|+++++..... ...|.+ -....++|.++... +... .+...+
T Consensus 258 ~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~r~~~g~Gg~~sf~l~g~~------~~~~----~f~~~l 327 (391)
T PRK08133 258 SLRMEAHSANALELAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGR------EAAW----RVIDAT 327 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCH------HHHH----HHHHHC
T ss_conf 999999999999999999709991479899998997778999708999725899971999------9999----999828
Q ss_pred HHCCEEECCCCCCCC----------------------CCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 862828726655676----------------------750-56861588899999999999999999
Q gi|254780153|r 337 EKEEIAYDIGSYRDA----------------------PLG-LRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 337 ~~~g~~~~~~~~r~~----------------------~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.--..+..+|+.++. ..+ +|++++= ||++.|++=|+.|+.
T Consensus 328 ~l~~~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~GI~~~liRlSVGl----Ed~~DLi~Dl~qAL~ 390 (391)
T PRK08133 328 RLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADLKADLARGLA 390 (391)
T ss_pred CCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHC
T ss_conf 846561352773012267511345438999998669894959999610----999999999999867
No 166
>PTZ00125 ornithine aminotransferase; Provisional
Probab=99.13 E-value=9.2e-08 Score=68.74 Aligned_cols=311 Identities=14% Similarity=0.076 Sum_probs=169.7
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------C--CCC-
Q ss_conf 96899998632103653289889-999999999999996889985799974873489998753205-------7--897-
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------G--YRG- 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~--~~~- 92 (391)
+|+ |.+++.+++-...|-+..| ......+.+.+..+.+. .+| ++..|||.+.|+++.=.. + ++.
T Consensus 67 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~a~~~l~~~~g~---~~v-~f~~SGsEA~e~AiklAr~~~~~~~~~~~~r~ 141 (415)
T PTZ00125 67 HPK-ILEALINQAKKLTLSSRAFYNQKLGEAEKYITNLFGY---DKV-LFMNTGAEANETAVKFARRWGYAVKGIPENQA 141 (415)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC---CEE-EECCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 799-9999999996578776753458999999999855499---889-95387588999999999898774167778960
Q ss_pred EEEEEECCHHHHHHHHHHHCCCCC---------EEEEECCCCCCCCHHH-CCCCCCEEEEEEECCCC---EEECC-----
Q ss_conf 079970736888887653238763---------0674057776578676-78556579974202420---22032-----
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQD---------VREFTAPYGSLPDFSK-VDFDRDVVFVWNGTTSG---VCVPD----- 154 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~-~~~~~~v~~~h~ETstG---v~~~~----- 154 (391)
.++...++|-++...-...-+... ......|+.....+++ ++....++.+-.|...| +..|.
T Consensus 142 ~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~~~iAAviiEPi~g~gG~~~p~~~yl~ 221 (415)
T PTZ00125 142 KIIFCNGNFSGRTMGAISASDDPKSYNKFGPFVPGFHKVDYNDLEALEKLLSKDPNVCAFIVEPIQGEAGVIVPDEGYLK 221 (415)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHH
T ss_conf 59997388688844543344574334577888897077046768999999604997689997465687884269999999
Q ss_pred -EEEECCCCCCEEEEEECCHHHHCCC-----CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf -0350256861488640110110254-----5568579997001200176-65154456778887654114457783123
Q gi|254780153|r 155 -VGFIPESREGLVICDATSAVFARHI-----DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIF 227 (391)
Q Consensus 155 -~~~~~~~~~~llivD~vSs~g~~p~-----d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~ 227 (391)
...+|+.+++++|+|-|.+-.++-= +..++.=.+...-|+|++= .=++.++.+++..+... +
T Consensus 222 ~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Plsav~~~~~i~~~~~---~-------- 290 (415)
T PTZ00125 222 QVYSLCKKYNVLLVADEVQTGLGRTGKLLAVDHEGVKPDIVLLGKALSGGHLPISAVLANDDVMLTIK---P-------- 290 (415)
T ss_pred HHHHHHHHHCCEEECCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCHHHHHHCC---C--------
T ss_conf 99999998487676452241677567621201789799821003144688776203533499996326---8--------
Q ss_pred HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf 20011232103347864466644889999999986201031899999999779999999874797167668820036531
Q gi|254780153|r 228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTS 307 (391)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~ 307 (391)
...++|+.--|+ ...+..++|+.+++++ ..++.+++.+.+.+.+..+. -.+.+. +.|....
T Consensus 291 -----------~~h~~T~~gnpl-a~Aaa~a~L~~i~~~~----l~~~v~~~G~~l~~~L~~L~-~~p~v~--~VRG~Gl 351 (415)
T PTZ00125 291 -----------GEHGSTYGGNPL-AAAVCKEALEVLSEEK----LAENAQKLGKYFRKGLKKLK-KSPIVE--IVRGKGL 351 (415)
T ss_pred -----------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHH-CCCCEE--EEECCCE
T ss_conf -----------998889981899-9999999999998646----99999999999999999874-699769--8700781
Q ss_pred EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 78-9824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.. +.+.++. .....++...+.++|+++...+ ...+|+.--=.++.++++.+++.||.++++.
T Consensus 352 ~~giel~~~~---------~~~~~~i~~~~~~~Gll~~~~g----~~vir~~PPL~it~~eid~~l~~l~~aL~~l 414 (415)
T PTZ00125 352 LNAIQFDPNV---------SNVAWDICLKFKENGLLCKPTH----DDIIRLTPPLTITKEQLDQCLLIIKKVLKSF 414 (415)
T ss_pred EEEEEEECCC---------CHHHHHHHHHHHHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9999985797---------6589999999995996996079----9989998993389999999999999999961
No 167
>PRK07777 aminotransferase; Validated
Probab=99.13 E-value=3.8e-07 Score=64.84 Aligned_cols=324 Identities=14% Similarity=0.039 Sum_probs=174.6
Q ss_pred CCCCCCCCCCC-CCCCCHHHHHHHHHHHCCCCCCC-CH--HHHHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHH
Q ss_conf 68998886888-77689689999863210365328-98--89999999999999996889985--799974873489998
Q gi|254780153|r 9 RKPKRPFFSSG-PCAKRPGWSLGILEGALLGRSHR-CV--LGKERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEM 82 (391)
Q Consensus 9 ~~p~~~~F~pG-P~~~~p~~v~~~~~~~~l~~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea 82 (391)
..|.-+||+-| |---.|..+++++.+.+-+-.|+ ++ =..++-+.+-+.+++-+++.-+- +| +++.|++.++..
T Consensus 22 ~~~~~I~l~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~pe~eI-~vt~Ga~~al~~ 100 (386)
T PRK07777 22 VRTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIAPLRAAIAAQRRRRYGLEYDPDTEV-LVTVGATEAIAA 100 (386)
T ss_pred CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHH
T ss_conf 7999889499789985689999999999862899779987649999999999999819999998809-987787999999
Q ss_pred HHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEE--EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCE
Q ss_conf 7532057897079970736888887653238763067--4057776578676785-----56579974202420220320
Q gi|254780153|r 83 ALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVRE--FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDV 155 (391)
Q Consensus 83 ~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~ 155 (391)
++.-|+.+||.+++..=.|-.-. ..+...+...+.+ .....+..+++++++. .+.+.++.-..-||...+..
T Consensus 101 ~~~~l~~pGD~Vlv~~P~y~~y~-~~~~~~g~~~v~vpl~~~~~~~~~d~~~l~~~~~~~tk~iil~~P~NPTG~v~s~e 179 (386)
T PRK07777 101 AVLGLVEPGDEVLLIEPYYDSYA-AVIAMAGAHRVAVPLVPDGRGFALDVDALRAAVTPRTRALIVNSPHNPTGTVLSAA 179 (386)
T ss_pred HHHHHCCCCCEEEECCCCCCCHH-HHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHH
T ss_conf 99996489987763499778769-99998389256134347788846696999974687776999799969888488899
Q ss_pred EE-----ECCCCCCEEEEEECCHHH---HCC---C---C-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCC
Q ss_conf 35-----025686148864011011---025---4---5-56857999700120017665--154456778887654114
Q gi|254780153|r 156 GF-----IPESREGLVICDATSAVF---ARH---I---D-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYV 218 (391)
Q Consensus 156 ~~-----~~~~~~~llivD~vSs~g---~~p---~---d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~ 218 (391)
+. +|.+++.++|.|-+=+.. +.+ + + ...-.+.+.|.-|.++ .|| +|.++..++.+++....+
T Consensus 180 ~l~~l~~la~~~~i~ii~DE~Y~~l~f~~~~~~~~~~~~~~~~~~i~i~S~SK~~~-~~G~R~G~~v~~~~li~~~~~~~ 258 (386)
T PRK07777 180 ELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMAERTVTISSAAKTFN-VTGWKIGWACGPAPLIAAVRAAK 258 (386)
T ss_pred HHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHH
T ss_conf 99999999864297886575377522688777736546786576024316667667-76622599985899999999999
Q ss_pred CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 45778312320011232103347864466644889999999986201031899999999779999999874797167668
Q gi|254780153|r 219 PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAV 298 (391)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~ 298 (391)
. + +-...+...-++...+|..- +.-++.+.+.++++.+.+.+.+...+ +....+
T Consensus 259 ~------------~-----------~~~~~~~~~Q~a~~~al~~~--~~~~~~~~~~~~~rrd~~~~~L~~~g-~~~~~p 312 (386)
T PRK07777 259 Q------------Y-----------LTYVGGAPFQPAVAHALDHE--DAWVAALRDSLQAKRDRLAAGLAEAG-FAVHDS 312 (386)
T ss_pred H------------H-----------CCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECC
T ss_conf 8------------6-----------36758658999999998687--59999999999999999999999769-887179
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC--C--CCCCCE-EEEECCCCCCHHHHHHHH
Q ss_conf 82003653178982473101137345678889999988-86282872665--5--676750-568615888999999999
Q gi|254780153|r 299 DETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS--Y--RDAPLG-LRVWVGVTVEKEDLLLLC 372 (391)
Q Consensus 299 ~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~--~--r~~~~~-~RIg~~g~i~~~dv~~L~ 372 (391)
+ -..+...+..... ..... .+...| .+.|+++--|. + ...+++ +|++... +++.++.-+
T Consensus 313 ~-------G~~f~~~~~~~~~--~~d~~----~f~~~L~~~~gV~v~PG~~F~~~~~~g~~~vRlsf~~--~~e~l~ea~ 377 (386)
T PRK07777 313 A-------GTYFLCADPRPLG--YDDGT----AFCRALPERVGVAAIPMSAFCDPADAWNHLVRFAFCK--RDDTLDEAI 377 (386)
T ss_pred C-------EEEEEEEECCCCC--CCCHH----HHHHHHHHHCCEEEECCHHHCCCCCCCCCEEEEEECC--CHHHHHHHH
T ss_conf 8-------2689988666689--99999----9999999868999988744288987789979999689--999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 373 DWLR 376 (391)
Q Consensus 373 ~aLe 376 (391)
+-|.
T Consensus 378 ~RL~ 381 (386)
T PRK07777 378 RRLR 381 (386)
T ss_pred HHHH
T ss_conf 9999
No 168
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.12 E-value=3.8e-08 Score=71.18 Aligned_cols=301 Identities=16% Similarity=0.082 Sum_probs=159.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..|=+... ++. .+||-+|..+++++++++|+.+++...-||. +.+.......+.++...
T Consensus 61 gNPT~~~lE~~l---a~LEgg~~---a~~-~sSGmaAi~~~l~~ll~~Gd~vv~~~~~Yggt~~~~~~~l~~~Gi~v~~~ 133 (426)
T PRK05994 61 TNPTTAVLEERV---AALEGGTA---ALA-VASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWA 133 (426)
T ss_pred CCHHHHHHHHHH---HHHHCCCE---EEE-ECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEE
T ss_conf 886699999999---99859972---899-44889999999999727899899848742689999999986088699997
Q ss_pred ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEE---CCE--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 05777657867678--556579974202420220---320--3502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCV---PDV--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~---~~~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.+.++ ..+...+++.||.+--.. ++. ..+++++++++|||.+ |-+...|++. ++|+++-|.
T Consensus 134 d~~-----d~~~~~~~i~~~T~lv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT~atP~~~~Pl~~-GaDivvhS~ 207 (426)
T PRK05994 134 DAD-----DPASFEAAITPRTKAIFIESIANPGGTITDIEAIAEVAHRAGLPLIVDNTLASPYLIRPIEH-GADIVVHSL 207 (426)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHHH-CCCEEEEEC
T ss_conf 899-----83889973688754999987899887234789999999971991786356520431586774-898899964
Q ss_pred HHCCCCCCCCE--EEEEC-HHHHHHHHH---CCCCCCCCCHHHCCHHH-----------HHHCCCCCCCCCCCCCHHHHH
Q ss_conf 12001766515--44567-788876541---14457783123200112-----------321033478644666448899
Q gi|254780153|r 192 QKVLGGEAGFG--IIILS-PASVERLEK---YVPSWPLPKIFRMVKGG-----------RVMEGLFCGETINTPSLLCIE 254 (391)
Q Consensus 192 QK~l~~ppGl~--~v~~s-~~al~~~~~---~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~TP~v~~i~ 254 (391)
-|-++|-.-+- +|+-+ ..-|.+..+ ..... +.+-.+.... +.......|. +++-+..|
T Consensus 208 TKyi~GHsDvlgG~vv~~g~~~w~~~~~~~~l~~~~--~~~~g~~~~~~~~~~~~~~~~r~~~lr~lG~---~lsP~da~ 282 (426)
T PRK05994 208 TKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPR--PEYHGLVLHETFGNFAFAIAARVLGLRDLGP---AISPFNAF 282 (426)
T ss_pred CCCCCCCCCEEEEEEECCCCCCHHHCCCCHHHCCCC--HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCHHHH
T ss_conf 510358876378888526520022124431223665--5645305987750578999999877541477---56816789
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CC-CCEEEEEECCCCCCCC
Q ss_conf 999999862010318999999997799999998747971676-----688200--------36-5317898247310113
Q gi|254780153|r 255 DYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RS-NTSICMKIVDSDIASL 320 (391)
Q Consensus 255 al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS-~~~v~~~~~d~~~~~~ 320 (391)
.+...| ..+.-|.+||.+++..+-+|+++++..... ...|.+ .+ -.+++|.+.+..
T Consensus 283 L~lRGL------~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~lak~~~~~g~G~~~Sf~l~g~~---- 352 (426)
T PRK05994 283 LILTGI------ETLPLRMQRHSDNALAVAEWLSGHPKVSWVNYAGLPSDKYHALAQKYSPKGAGAVFTFGLKGGY---- 352 (426)
T ss_pred HHHCCC------CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH----
T ss_conf 997257------8389999999999999999996299978898989899803999998788997379999966979----
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 7345678889999988862828726655676----------------------75-056861588899999999999999
Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
+... .+...|.--..+..+|+..+. +. -+|++++ .||++.|++-|+.
T Consensus 353 --~~~~----~f~~~l~lf~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~eDLi~DL~q 422 (426)
T PRK05994 353 --EAGV----KLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLSDEQKVAAGAGPDVVRLSIG----IEDKDDIIADLEQ 422 (426)
T ss_pred --HHHH----HHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHH
T ss_conf --9999----99982791500316677550457864234521899999965989697999843----1999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 378 VFYF 381 (391)
Q Consensus 378 ~~~~ 381 (391)
|+++
T Consensus 423 AL~k 426 (426)
T PRK05994 423 ALAK 426 (426)
T ss_pred HHCC
T ss_conf 8585
No 169
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.12 E-value=1.5e-07 Score=67.42 Aligned_cols=279 Identities=18% Similarity=0.187 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEEE
Q ss_conf 8899999999999999968899857999748734899987532057897079970736888--88765323876306740
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREFT 121 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~~ 121 (391)
.+-...++ +.|..+-+.. -.++.+||-.|+.+++++++++|+.+++....||.- .++...+..+.++...+
T Consensus 39 nPT~~~le---~~la~LEg~~----~a~~~sSGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~~~~~~l~~~Gi~v~~~d 111 (369)
T cd00614 39 NPTVDALE---KKLAALEGGE----AALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVD 111 (369)
T ss_pred CHHHHHHH---HHHHHHHCCC----CEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEC
T ss_conf 86799999---9999982998----0899657899999999985288999999578852399999977860892389767
Q ss_pred CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEEC--CEE---EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf 57776578676785--565799742024202203--203---502568614886401--101102545568579997001
Q gi|254780153|r 122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVP--DVG---FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ 192 (391)
Q Consensus 122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~--~~~---~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ 192 (391)
.. +.+.++. .+..-+++.||.+--... ..+ .+++++++++|||-+ +-+...|++ .+.|+++-|.-
T Consensus 112 ~~-----d~~~~~~~i~~~t~li~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atp~~~~Pl~-~GaDivv~S~T 185 (369)
T cd00614 112 PD-----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPLE-LGADIVVHSAT 185 (369)
T ss_pred CC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCEEEEEECCCCCHHCCCHHH-HCCCEEEEECC
T ss_conf 87-----8688997638785089996589997062272999999976671799747743120158577-48968999556
Q ss_pred HCCCCCCCC--EEEEECHH-HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 200176651--54456778-887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 193 KVLGGEAGF--GIIILSPA-SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 193 K~l~~ppGl--~~v~~s~~-al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
|-++|-..+ |.|+.+.+ .+++... + .. ..|. +++-+..|.+...| ..+
T Consensus 186 Ky~~Ghsd~l~G~v~~~~~~~~~~l~~------------~---~~-----~~G~---~~sp~~a~l~lrgl------~TL 236 (369)
T cd00614 186 KYIGGHSDVIAGVVVGSGEALIQRLRF------------L---RL-----ALGT---ILSPFDAWLLLRGL------KTL 236 (369)
T ss_pred CCCCCCCCEEEEEEEECHHHHHHHHHH------------H---HH-----HCCC---CCCHHHHHHHHHCC------CCH
T ss_conf 312588775768998270888999999------------9---98-----6457---68978889988601------759
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676688200--------------365317898247310113734567888999998
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
.-|.+||.+++..+-+|+++++.... |..|.. -....++|.++.. .+ ..+.+...
T Consensus 237 ~lRm~~~~~nA~~lA~~L~~hp~V~~-V~yPgL~s~p~~~~~~~~~~g~ggl~sf~l~~~------~~----~~~~f~~~ 305 (369)
T cd00614 237 PLRMERHSENALKVAEFLEKHPKVER-VYYPGLPSHPQHELAKKQMSGYGGVFSFELKGG------LE----AAKKFLNA 305 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCE-EECCCCCCCCCHHHHHHHCCCCCEEEEEEECCC------HH----HHHHHHHH
T ss_conf 99999999999999999971999887-978789888048999976899971779997698------99----99999985
Q ss_pred HHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676----------------------75-05686158889999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
|.--.....+|+.++. .. -+|+++|= ||++.|++-|+.||
T Consensus 306 l~lf~~~~S~Gg~~SLi~~p~~~~~~~~~~~~~~~~Gi~~~liRlsvGl----Ed~eDLi~DL~~AL 368 (369)
T cd00614 306 LKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred CCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEC----CCHHHHHHHHHHHC
T ss_conf 8906331267876715677642355328999999669792969999500----99999999999853
No 170
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.12 E-value=2.4e-07 Score=66.11 Aligned_cols=306 Identities=14% Similarity=0.073 Sum_probs=163.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-------CCCCC-CEE
Q ss_conf 968999986321036532898899-999999999999968899857999748734899987532-------05789-707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-------LLGYR-GVD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-------l~~~~-~~~ 94 (391)
+|+ |.+++.+++-...|-+..|. +-..+.-+.|.+.. +-+ +|+| ..||+.++|+++.= --+++ ..+
T Consensus 58 ~p~-I~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L~~~~--~~d-rv~f-~~SGSEAvE~AiklAr~~~~~~~~~~r~~i 132 (403)
T PRK05093 58 HPA-LVKALKEQGEKLWHISNVFTNEPALRLAKKLVDAT--FAE-RVFF-ANSGAEANEAALKLARRYACDRHGPEKTEI 132 (403)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC--CCC-EEEE-ECCHHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 799-99999999875577757414889999999986416--877-5998-386778999999999999997289987547
Q ss_pred EEEECCHHHHHHHHHHHCCCC----------CEEEEECCCCCCCCHHHCCC--CCCEEEEEEECCCC---EEECC-----
Q ss_conf 997073688888765323876----------30674057776578676785--56579974202420---22032-----
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSLQ----------DVREFTAPYGSLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD----- 154 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~----- 154 (391)
+...++|=++...... ..+. ...+...|++ +++.++. .+.++.+-.|...| +..|.
T Consensus 133 i~~~~~yHG~t~~a~s-~~g~~~~~~~~~p~~~~~~~~p~~---d~~~l~~~~~~~iaAviiEPi~g~gG~~~~~~~yl~ 208 (403)
T PRK05093 133 IAFHNSFHGRTLFTVS-VGGQPKYSDGFGPKPADITHVPFN---DLAALKAVIDDKTCAVVVEPIQGEGGVIPATPEFLQ 208 (403)
T ss_pred EEECCCCCCCCHHHHH-HCCCCHHCCCCCCCCCCCEECCCC---CHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHH
T ss_conf 7775886888368776-258801102778999775655633---688886033774479999576678997589999999
Q ss_pred -EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf -035025686148864011011025---4--55685--799970012001766515445677888765411445778312
Q gi|254780153|r 155 -VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 155 -~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
...+|+++++++|+|=|.+=.++- + +..++ |++ ...|+|++===++.++.+++..+...
T Consensus 209 ~lr~lc~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PDiv--~~gKglggG~Plsav~~~~~i~~~~~----------- 275 (403)
T PRK05093 209 GLRELCDKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTAEIASHFK----------- 275 (403)
T ss_pred HHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE--EECCCCCCCCCEEEEEECHHHHHHCC-----------
T ss_conf 99986301683798601342688777752223689899889--97300158864279987288786507-----------
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391)
....++|+..-|+ ...+...+|+.+++++ ..++.+++.+.+.+.+++..--...+. +.|...
T Consensus 276 -----------~~~~g~T~~g~pl-a~aaala~L~~i~~~~----l~~~a~~~G~~l~~~L~~l~~~~~~i~--~VRG~G 337 (403)
T PRK05093 276 -----------VGTHGSTYGGNPL-ACAVAEAVFDIINTPE----VLEGVKAREQRFVDGLQKINEKYGVFS--EIRGKG 337 (403)
T ss_pred -----------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCEE--EEEECC
T ss_conf -----------8772658985899-9999999999996344----999999999999999999986289826--665412
Q ss_pred EEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 178-9824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 307 SIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 307 ~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
... +.+.++.. ...+++...+.++|+++...| +..+|+.--=.++.++|+.+++.||.++.+.
T Consensus 338 lm~giel~~~~~---------~~a~~i~~~~~~~Gll~~~~g----~n~irl~PPL~it~~eid~~l~~l~~al~eV 401 (403)
T PRK05093 338 LLIGAELNEQYK---------GRARDFLYAAAEEGVMVLVAG----PDVLRFAPSLVIPDADIDEGLARFEKAVAKV 401 (403)
T ss_pred EEEEEEECCCCC---------HHHHHHHHHHHHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 699999658752---------169999999996892895279----9979997884489999999999999999998
No 171
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.12 E-value=4.5e-07 Score=64.36 Aligned_cols=307 Identities=19% Similarity=0.145 Sum_probs=183.8
Q ss_pred CCCCCCHHHHHHHHHHHCCCC-----CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf 877689689999863210365-----328-98899999999999999968899857999748734899987532057897
Q gi|254780153|r 19 GPCAKRPGWSLGILEGALLGR-----SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391)
Q Consensus 19 GP~~~~p~~v~~~~~~~~l~~-----sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391)
|=+. +|+ +.+++.+.+-.. +-| -.=-..++.+..+.|.++++.+. ++++ +||=.+..+++..|.++++
T Consensus 51 GLa~-~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~---al~f-~SGy~AN~~~i~~l~~~~d 124 (388)
T COG0156 51 GLAS-HPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA---ALLF-SSGFVANLGLLSALLKKGD 124 (388)
T ss_pred CCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---EEEE-CCCCHHHHHHHHHHCCCCC
T ss_conf 5268-878-99999999998199989767044782899999999999849984---8997-1531117778888568886
Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CC---C---CCEEEEE-EECCCCEEECCEEE--ECCCC
Q ss_conf 07997073688888765323876306740577765786767-85---5---6579974-20242022032035--02568
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DF---D---RDVVFVW-NGTTSGVCVPDVGF--IPESR 162 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~---~---~~v~~~h-~ETstGv~~~~~~~--~~~~~ 162 (391)
.++. .....--+.+..+.....+....- ....+++.. .. . ....+|. .=+..|..-|+.++ +++.+
T Consensus 125 li~~--D~lnHASiidG~rls~a~~~~f~H--nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky 200 (388)
T COG0156 125 LIFS--DELNHASIIDGIRLSRAEVRRFKH--NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKY 200 (388)
T ss_pred EEEE--ECHHHHHHHHHHHHCCCCEEEECC--CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8998--010205399889857883898268--999999999876222478754999823421899857789999999983
Q ss_pred CCEEEEEECCHHHHCC---------C--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 6148864011011025---------4--5568579997001200176651544567788876541144577831232001
Q gi|254780153|r 163 EGLVICDATSAVFARH---------I--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 163 ~~llivD~vSs~g~~p---------~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
++.++||=+=++|..- + ....+|++..+--|+||+-.| ++..+....+-.... ..+ .+
T Consensus 201 ~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg--~v~g~~~~~d~L~~~--ar~--~i----- 269 (388)
T COG0156 201 GALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGG--YIAGSAALIDYLRNR--ARP--FI----- 269 (388)
T ss_pred CCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECHHHHCCCCC--EEECCHHHHHHHHHH--CCC--EE-----
T ss_conf 9589998520102437998617887388876514999875054322684--465759999999971--865--22-----
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 12321033478644666448899999999862010318999999997799999998747971676688200365317898
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK 311 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~ 311 (391)
.+ -.-|| ....+..++++.+.+. ..+..+.+++.+.++..+...++.. ...-| -++++.
T Consensus 270 ----------fS-talpP-~~aaa~~~al~~l~~~---~~~r~~L~~~~~~~~~~~~~~~~~~-----~~s~s-~I~pv~ 328 (388)
T COG0156 270 ----------FS-TALPP-AVAAAALAALRILEEG---PERRERLQELAAFFRSLLKALGLVL-----LPSES-PIIPVI 328 (388)
T ss_pred ----------CC-CCCCH-HHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHCCCCC-----CCCCC-CEEEEE
T ss_conf ----------14-77897-8899999999998758---7889999999999998888529765-----78889-866169
Q ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 2473101137345678889999988862828726655676750---568615888999999999999999
Q gi|254780153|r 312 IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 312 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
+.|+.. ...+...|.++|+.+..-.+++++++ +||..-...+++||+.|+++|..+
T Consensus 329 ~gd~~~-----------a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 329 LGDEER-----------ALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ECCHHH-----------HHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 688899-----------99999999977925712368998999650898716779999999999999852
No 172
>PRK12403 putative aminotransferase; Provisional
Probab=99.12 E-value=3.1e-07 Score=65.35 Aligned_cols=329 Identities=15% Similarity=0.099 Sum_probs=161.4
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH---HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------CC-CCCE
Q ss_conf 968999986321036532898899---9999999999999688998579997487348999875320------57-8970
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK---ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------LG-YRGV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~---~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~~-~~~~ 93 (391)
+|. |.+++.+++-...|-+.-|. ....+.-+.|.+++ |..+.-+++..|||.+.|+++.=. .+ ++..
T Consensus 72 ~p~-I~~Ai~~q~~~l~~~~~~~~~~~~~~~elAe~L~~~~--P~~~~~v~f~~sGSEA~E~AiklAr~y~~~~g~~~~~ 148 (460)
T PRK12403 72 RKD-LAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLL--PGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKK 148 (460)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 599-9999999997558715654567889999999999757--8765869844871899999999999999860899746
Q ss_pred E-EEEECCHHHHHHHHHHH--------CCC--CCEEEEECCCCC----CCCHH--------HC-----C-CCCCEEEEEE
Q ss_conf 7-99707368888876532--------387--630674057776----57867--------67-----8-5565799742
Q gi|254780153|r 94 D-VLAWESFGLGWMSDIRQ--------LSL--QDVREFTAPYGS----LPDFS--------KV-----D-FDRDVVFVWN 144 (391)
Q Consensus 94 ~-~~~~g~~~~r~~~~~~~--------~~~--~~~~~~~~~~g~----~~~~~--------~~-----~-~~~~v~~~h~ 144 (391)
. +..+++|-++....... .+. .++.....|+-. ....+ ++ + ....++.+-.
T Consensus 149 ~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~~p~~~~~~~P~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi~ 228 (460)
T PRK12403 149 IMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVA 228 (460)
T ss_pred EEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 99996688774079887246741244567889984114775445566778877888999999999999628986699995
Q ss_pred ECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHH
Q ss_conf 02420---22032------035025686148864011011025---4--5568579997001200176-65154456778
Q gi|254780153|r 145 GTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPA 209 (391)
Q Consensus 145 ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~ 209 (391)
|+..| +..|. ...+|+++++++|+|=|.+=.++- + +.+++.=.+...-|+|++= -=++.++.|++
T Consensus 229 EPi~g~gG~i~pp~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gV~PDivt~gK~l~gG~~Plsav~~~~~ 308 (460)
T PRK12403 229 EPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKR 308 (460)
T ss_pred CCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHH
T ss_conf 45225586572756776999999732596699862512776343773002179587712221244578776179973589
Q ss_pred HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r 210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE 289 (391)
Q Consensus 210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~ 289 (391)
..+.... .+. . ...++|+.--|+ ...+..++|+.++++ ++-...++ +..+.+.+.+..
T Consensus 309 i~~~~~~---~~~---~------------~~hg~T~~Gnpl-a~Aaala~l~~i~~e-~l~~~~~~--~~g~~l~~~L~~ 366 (460)
T PRK12403 309 IAEALVE---QGG---V------------FAHGLTYSGHPV-AAAVAIANLKALRDE-GVVTRVKD--DTGPYLQRCLRE 366 (460)
T ss_pred HHHHHHC---CCC---C------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CHHHHHHH--HHHHHHHHHHHH
T ss_conf 9987503---786---5------------014778899989-999999999999866-69999999--999999999999
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf 79716766882003653178982473101137345678889999988862828726655676750568615888999999
Q gi|254780153|r 290 NDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLL 369 (391)
Q Consensus 290 ~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~ 369 (391)
...-.+++.+-.-+..+... .+.++................+.....++|+++.. ....+++.--=.++.++++
T Consensus 367 l~~~~p~vgdVRG~GLm~gi-elv~~~~~~~~~~~~~~~~~~~~~~~~~~Glli~~-----~~~~~~l~PPLiit~~eid 440 (460)
T PRK12403 367 VFGDHPLVGEVQGAGLVAAL-QFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRS-----TLGRMIMAPALVAGRAEID 440 (460)
T ss_pred HHHCCCCEEEEECCCEEEEE-EECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHHHHH
T ss_conf 87259958863014549999-94257642113652578999999999979989973-----6980999899438899999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780153|r 370 LLCDWLRWVFYFQK 383 (391)
Q Consensus 370 ~L~~aLe~~~~~~k 383 (391)
.+++.|+.++.+.-
T Consensus 441 ~~~~~l~~al~~~~ 454 (460)
T PRK12403 441 ELVDKTRIAVDRTA 454 (460)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 173
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.12 E-value=7.8e-08 Score=69.20 Aligned_cols=313 Identities=17% Similarity=0.182 Sum_probs=184.5
Q ss_pred CCHHHHHHHHHHHCCCCC------CC----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf 896899998632103653------28----98899999999999999968899857999748734899987532057897
Q gi|254780153|r 23 KRPGWSLGILEGALLGRS------HR----CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391)
Q Consensus 23 ~~p~~v~~~~~~~~l~~s------HR----s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391)
+.|. |++++...+-+++ .| .....++-.-+.++.+++|+... +=+-+-||+.++-++.+.|++|||
T Consensus 31 ~S~~-v~~a~gS~ltnkYaeG~pg~Ryy~G~~~iD~iE~la~~rak~LF~a~~---anVqp~SGs~AN~av~~all~pGD 106 (402)
T cd00378 31 TSPA-VMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEY---ANVQPHSGSQANLAVYFALLEPGD 106 (402)
T ss_pred CCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 7999-999856730154768899864667662599999999999999838987---475878739999999999727999
Q ss_pred EEEEEE---C-CHHHHHHHHHHHCCCCCEEEEECCC-----CCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEE
Q ss_conf 079970---7-3688888765323876306740577-----76578676785-----565799742024202203--203
Q gi|254780153|r 93 VDVLAW---E-SFGLGWMSDIRQLSLQDVREFTAPY-----GSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVG 156 (391)
Q Consensus 93 ~~~~~~---g-~~~~r~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~ 156 (391)
.++... | +.+..........+ ... ...++ ....|.+++.. .+.+.++-. ++.--..| ...
T Consensus 107 ~il~l~l~~GGHltHg~~~~v~~~g-~~~--~~~~Y~vd~~~~~IDyd~~~~~a~~~kPklIi~G~-S~y~r~~d~~~~r 182 (402)
T cd00378 107 TIMGLDLSHGGHLTHGSFTKVSASG-KLF--ESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA-SAYPRPIDFKRFR 182 (402)
T ss_pred EEEEECCCCCCCCCCCCCCCCEEEE-EEE--EEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCHHHHH
T ss_conf 8998664347775667787720213-567--88963245565871899999999865996999777-1565655889999
Q ss_pred EECCCCCCEEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECH-HHHHHHHHCCCCCCCCCHHHCC
Q ss_conf 5025686148864011011-----025455685799970012001766515445677-8887654114457783123200
Q gi|254780153|r 157 FIPESREGLVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSP-ASVERLEKYVPSWPLPKIFRMV 230 (391)
Q Consensus 157 ~~~~~~~~llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~-~al~~~~~~~~~~~~~~~~~~~ 230 (391)
.++.+.++++++|++--.| ..|=+....|++.++.+|-|-||-| +++..++ +..+++.... .
T Consensus 183 eIad~vgA~l~~D~aHi~GLIA~g~~p~Pl~~ADvvt~tTHKTlrGPrG-GiIl~~~~~~~~kId~av----f------- 250 (402)
T cd00378 183 EIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAV----F------- 250 (402)
T ss_pred HHHHHCCCEEEEEHHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCHHHHHHHHHHH----C-------
T ss_conf 9998709889855012344303565799768765774464345789984-089954278998854650----9-------
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 11232103347864466644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391)
Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391)
..+-..|-.+.|.++..++.+..+.. .....++.-++++.+-+.+...+ +..... ..-+..+ .+
T Consensus 251 -----------Pg~qggph~h~iAa~Aval~Ea~~~~-f~~Ya~qVv~NAkaLA~~L~~~G-~~vv~g--gTd~H~v-lv 314 (402)
T cd00378 251 -----------PGLQGGPHLHVIAAKAVALKEALEPE-FKAYAKQVVENAKALAEALKERG-FKVVSG--GTDNHLV-LV 314 (402)
T ss_pred -----------CCCCCCHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHCC-CEEECC--CCCCCEE-EE
T ss_conf -----------86446745667899999999986866-89999999999999999998589-479748--9988779-99
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC----CC--CCCCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Q ss_conf 8247310113734567888999998886282872665----56--767505686158----8899999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS----YR--DAPLGLRVWVGV----TVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----~r--~~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~ 380 (391)
.+.+..+ . -+.....|.+.|+.+.-+. .+ ..+.|+|||+-- -..++|+..+.+.|..+..
T Consensus 315 d~~~~g~-------~---G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGT~a~T~rG~~e~em~~ia~lI~~~l~ 384 (402)
T cd00378 315 DLRPKGI-------T---GKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred ECCCCCC-------C---HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 6664568-------9---99999999984908754748899999999976164778998589988999999999999981
Q ss_pred H
Q ss_conf 9
Q gi|254780153|r 381 F 381 (391)
Q Consensus 381 ~ 381 (391)
.
T Consensus 385 ~ 385 (402)
T cd00378 385 D 385 (402)
T ss_pred C
T ss_conf 7
No 174
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.12 E-value=3.2e-07 Score=65.31 Aligned_cols=277 Identities=14% Similarity=0.109 Sum_probs=157.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCCEEE
Q ss_conf 289889999999999999996889985799974873489998753205789-7079970736888887653238763067
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGWMSDIRQLSLQDVRE 119 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~ 119 (391)
||=|+ .-..+.++.|.+.++++.+ .+++ ..|+...++.++..++++| +.+++..-.|+.. ..+++..+..+..
T Consensus 48 nRYPD--~~~~~L~~~lA~~~~v~~~-~Ii~-gnGSde~I~~i~~af~~pg~d~vl~~~PtF~~Y--~~~a~~~g~~~~~ 121 (346)
T PRK04635 48 NRYSE--CQPKELIQAYAAYAGVKPE-QVLT-SRGADEGIELLIRAFCEPNQDAILYCPPTYGMY--AISAETIGVERKT 121 (346)
T ss_pred CCCCC--CCHHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHCCCEEEE
T ss_conf 67999--8889999999999686966-8998-488999999999998469997699778756999--9999747967999
Q ss_pred EECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-HHHCC--CC-CCCC-EE
Q ss_conf 40577765786767----855657997420242022032035---025-6861488640110-11025--45-5685-79
Q gi|254780153|r 120 FTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA-VFARH--ID-FNKL-DV 186 (391)
Q Consensus 120 ~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs-~g~~p--~d-~~~i-Dv 186 (391)
+........+++.+ +..+.+.+|.=..-||...+..++ +.. ..+.++|+|-.=. |...+ ++ ..+. .+
T Consensus 122 vpl~~d~~~dl~~l~~~~~~~kli~l~NPNNPTG~~~~~~~l~~l~~~~~~~~lvVvDEAY~ef~~~~s~~~l~~~~~Nl 201 (346)
T PRK04635 122 VPLTSDWQLDLPSIEANLDNVKLVFVCSPNNPTGNLVKRKDIISLLEMTKDRAIVVMDEAYIDFCPEASTVDLLAQYPNL 201 (346)
T ss_pred EECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCCCCCCHHHHHHHCCCE
T ss_conf 73685657799999864348758997789998764489999999998487565599874531036564467898608816
Q ss_pred EE-ECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99-7001200176651--54456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r 187 VT-FSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL 263 (391)
Q Consensus 187 ~~-a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i 263 (391)
++ =+--|.+| -||+ |.++.+++.++...+...+ +..+.....+...+|..
T Consensus 202 iVlRTfSK~~g-LaGlRlGY~ia~~~~i~~l~k~~~p-------------------------~~v~~~a~~~a~~al~~- 254 (346)
T PRK04635 202 AILRTLSKAFA-LAGLRCGFTLANEELINVLLKVIAP-------------------------YPVPVPVAEIATQALSE- 254 (346)
T ss_pred EEEECHHHHHC-CCCCCCEEECCCHHHHHHHHHHHCC-------------------------CCCCHHHHHHHHHHHHH-
T ss_conf 87505678740-6541114100799999999984089-------------------------88889999999999730-
Q ss_pred HCCCCHHH---HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 01031899---999999779999999874797167668820036531789-82473101137345678889999988862
Q gi|254780153|r 264 KKMGGLSA---CVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDSDIASLDINSQKSFCKSMLSFLEKE 339 (391)
Q Consensus 264 ~~~gGl~~---~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~~~~~~~~~~~~~~~~~~~~~l~~~ 339 (391)
. .... ......+..+.++..+...+++..+ -|.+|..+ ++++ ...+...|.++
T Consensus 255 --~-~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~------~s~aNFil~~~~~--------------~~~~~~~l~~~ 311 (346)
T PRK04635 255 --A-GLARAKFQVLDLSANRAYLQAGLSMLPGVTVF------EGWGNYLLVKFPD--------------GDALFKAAWDH 311 (346)
T ss_pred --H-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC------CCCCCEEEEECCC--------------HHHHHHHHHHC
T ss_conf --7-89999999999999999999999867990778------9988089998899--------------99999999839
Q ss_pred CEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8287266556767505686158889999999999999999
Q gi|254780153|r 340 EIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 340 g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
|+++.-. ..+..+||+.+ ++++.++|+++|..-|
T Consensus 312 GI~VR~~---~~~~~iRISvG---t~eEn~~~l~~lr~~~ 345 (346)
T PRK04635 312 GIILRNS---PIENCVRISVG---NREECEKTLGFIRNYY 345 (346)
T ss_pred CEEECCC---CCCCEEEEECC---CHHHHHHHHHHHHHHH
T ss_conf 9598569---99997999539---9999999999999985
No 175
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.12 E-value=4.1e-07 Score=64.61 Aligned_cols=288 Identities=13% Similarity=0.067 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH
Q ss_conf 689999863210365-3289889999999999999996889985799974873489998753205789707997073688
Q gi|254780153|r 25 PGWSLGILEGALLGR-SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL 103 (391)
Q Consensus 25 p~~v~~~~~~~~l~~-sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~ 103 (391)
|..+++++.+.+-.. .||=|+ .-..+.++.+.+.++++.+ .|++ ..|++..+.+++.-+ +++.+++..=+|+.
T Consensus 33 p~~v~~ai~~~l~~~~~~rYPd--~~~~~Lr~~ia~~~gv~~~-~v~~-gnGs~e~i~~~~~~~--~gd~v~i~~P~f~~ 106 (337)
T PRK03967 33 PEELKEEIFEELKRVPFNRYPH--ITADPLREAIAEFLGLDAE-NIIV-GNGSDELISYLVKLF--NGKYIVISPPTFGM 106 (337)
T ss_pred CHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHHHCCCHH-EEEE-CCCHHHHHHHHHHHC--CCCEEEECCCCCHH
T ss_conf 9999999999987158776999--9879999999998683841-0998-278899999999863--99979986898308
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEEEC-CCCCCEEEEEECCH-HHHC
Q ss_conf 888765323876306740577765786767----85565799742024202203203502-56861488640110-1102
Q gi|254780153|r 104 GWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGFIP-ESREGLVICDATSA-VFAR 177 (391)
Q Consensus 104 r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~~~-~~~~~llivD~vSs-~g~~ 177 (391)
. ..+++..+..+...........+++.+ +..+.+.++.=..-||...+..++.. ...+.++|+|-.=. |...
T Consensus 107 Y--~~~~~~~g~~~~~vpl~~~f~~d~~~~~~~~~~~~~v~l~nPnNPTG~~~~~~el~~~~~~~~~vvvDEaY~ef~~~ 184 (337)
T PRK03967 107 Y--SFYAKLNGIPVIDVPLKEDFTIDGDRIVEKAKDASAVFICSPNNPTGNLQPIEEILKVLDTGKPVVVDEAYVEFSGK 184 (337)
T ss_pred H--HHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHCCC
T ss_conf 9--99999839859996153456789999985177887899938999876216789999865008878843554764575
Q ss_pred CC-----CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCH
Q ss_conf 54-----5568579997001200176651--5445677888765411445778312320011232103347864466644
Q gi|254780153|r 178 HI-----DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSL 250 (391)
Q Consensus 178 p~-----d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v 250 (391)
.. ...++ ++.-+--|.+| -||+ |.++.+++.+++..+...+ ++-+.
T Consensus 185 s~~~l~~~~~nl-iv~rSfSK~~g-laGlRlGy~ia~~~~i~~l~k~~~p-------------------------~~vn~ 237 (337)
T PRK03967 185 SYIGLLDEYDNL-ILLRTFSKAFG-LAGIRVGYAIANEEIIKALYRIKPP-------------------------FSLNI 237 (337)
T ss_pred CHHHHHHHCCCC-EEEECCCHHHC-CCCCCCEEECCCHHHHHHHHHHCCC-------------------------CCCCH
T ss_conf 257788747762-16655665534-5620023101899999999995389-------------------------87759
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 88999999998620103189999999977999999987479716766882003653178982473101137345678889
Q gi|254780153|r 251 LCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCK 330 (391)
Q Consensus 251 ~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~ 330 (391)
....+...+|+ .++=++...+...+..+.+++.+.... + -|.+|..+. + .
T Consensus 238 ~a~~aa~aal~---~~~~~~~~~~~~~~~r~~l~~~L~~~~----~------ps~aNFvl~--~---------------~ 287 (337)
T PRK03967 238 LSEKIVRLMLD---HYDLIKERIDYIIKERERVYRELGDYA----Y------PSDANFLLL--K---------------L 287 (337)
T ss_pred HHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHCCC----C------CCCCEEEEE--E---------------H
T ss_conf 99999999962---999999999999999999999812777----8------998819997--2---------------5
Q ss_pred HHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999988862828726655676750568615888999999999999999999
Q gi|254780153|r 331 SMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 331 ~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
++...|.++|+++.--+. .....+||+.+ ++++.+.|+++|+...++
T Consensus 288 ~~~~~L~~~gIlVR~~~~-~~~~~iRIsvg---t~een~~ll~aLke~~e~ 334 (337)
T PRK03967 288 DAYDYLLENGIVVRKLSG-RLEGHIRVTIG---KKEENDEFIKALKEFKEN 334 (337)
T ss_pred HHHHHHHHCCEEEECCCC-CCCCEEEEECC---CHHHHHHHHHHHHHHHHH
T ss_conf 899999849909948999-99998999839---999999999999999997
No 176
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.11 E-value=8.2e-08 Score=69.06 Aligned_cols=305 Identities=14% Similarity=0.035 Sum_probs=177.1
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE
Q ss_conf 88877689689999863210365328988999999999999999688998579997487348999875320578970799
Q gi|254780153|r 17 SSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL 96 (391)
Q Consensus 17 ~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~ 96 (391)
.+||+ |+ ++++|...--+ .+.-+-..+..+.+...++++|+. . .++|+ .|||.+...++.....++..+++
T Consensus 9 ~~g~~---~~-m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~g~-~--a~~Fv-~sGT~aN~lal~~~~~~~~~vi~ 79 (342)
T COG2008 9 VAGPT---PE-MREALAAANAV-GDDVYGEDPTTNALEQRIAELFGK-E--AALFV-PSGTQANQLALAAHCQPGESVIC 79 (342)
T ss_pred CCCCC---HH-HHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCC-C--EEEEE-CCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 67879---99-99999855245-787778888999999999998577-4--49992-68438889999986489976998
Q ss_pred EECCHHHHH-HHHHHHCCCC-CEEEEECCCCCCCCHHHCCCC---CC------EEEEEEECCC--CEEECCEEE-----E
Q ss_conf 707368888-8765323876-306740577765786767855---65------7997420242--022032035-----0
Q gi|254780153|r 97 AWESFGLGW-MSDIRQLSLQ-DVREFTAPYGSLPDFSKVDFD---RD------VVFVWNGTTS--GVCVPDVGF-----I 158 (391)
Q Consensus 97 ~~g~~~~r~-~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~---~~------v~~~h~ETst--Gv~~~~~~~-----~ 158 (391)
.-...-..+ ..-.+..++. .......+.|.. ++++++.. .+ -.++.-.|.| |..+|..++ +
T Consensus 80 ~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gkl-t~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~ 158 (342)
T COG2008 80 HETAHIYTDECGAPEFFGGGQKLPIVPGADGKL-TPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV 158 (342)
T ss_pred ECCCCCEECCCCCHHHHCCCCEECCCCCCCCCC-CHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEECCHHHHHHHHHH
T ss_conf 525312023567588873885430479877873-9999997636777655887507986136778666489999999999
Q ss_pred CCCCCCEEEEEEC------CHHHHCCC-CCC-CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf 2568614886401------10110254-556-857999700120017665154456778887654114457783123200
Q gi|254780153|r 159 PESREGLVICDAT------SAVFARHI-DFN-KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV 230 (391)
Q Consensus 159 ~~~~~~llivD~v------Ss~g~~p~-d~~-~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~ 230 (391)
|++++..+=+|+. -+++ .+. +|. .+|+++.+.-|+++ .|+=++|+.+.+..++...+...
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D~v~~~~tK~g~-~~~gAiv~gn~~~~~~a~~~rK~---------- 226 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALG-VALKTIKSYVDSVSFCLTKGGG-APVGAIVFGNRDFAKRARRWRKR---------- 226 (342)
T ss_pred HHHHCCCEEECHHHHHHHHHHCC-CCHHHHHHHCCEEEEECCCCCC-CEEEEEEECCHHHHHHHHHHHHH----------
T ss_conf 99809954404088988998739-8889987428899991314775-21325897389999998999998----------
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 112321033478644666448899999999862010318999999997-7999999987479716766882003653178
Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNA-NAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~-~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
.|+.. .-.+-+..+.+..+++ ++-.+.++|.. +++.+-+.+.+..+.....+ +.+|..
T Consensus 227 ----------~Ggl~-----~k~r~laA~~~~~l~~-~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-----~~tN~v 285 (342)
T COG2008 227 ----------AGGLM-----RKARFLAAQGLYALED-DVWRLAADHANAMAARLAEGLEAKPGVKLAFP-----VETNMV 285 (342)
T ss_pred ----------HCCCH-----HHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC-----CCCCEE
T ss_conf ----------65627-----6654899999999731-58888878889999999976532689434367-----766279
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r 310 MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
|..-+... .+ .......+.+.|+.. ++|. ...|-=+--+++.+||+.|+..+.-+
T Consensus 286 f~~l~~~~------i~---~l~~~~~~~~~~~~~--~~~~---~~vRfvts~a~~~edv~~~~~~~~~~ 340 (342)
T COG2008 286 FVRLPESA------IE---ALRLAGALFYRGVLI--GAHG---EIVRFVTSWATSEEDVDELVAAIKAL 340 (342)
T ss_pred EEECCHHH------HH---HHHHHCHHHEEEEEC--CCCC---CEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99777678------89---997515212001221--5777---55899850249999999999999996
No 177
>PRK07324 transaminase; Validated
Probab=99.11 E-value=3e-07 Score=65.43 Aligned_cols=284 Identities=14% Similarity=0.126 Sum_probs=152.6
Q ss_pred HHHHHHHHHHC-C-CCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCC
Q ss_conf 99999999968-8-9985799974873489998753205789707997073688888765323876306740--577765
Q gi|254780153|r 52 KAIQLTRKVLE-V-PENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSL 127 (391)
Q Consensus 52 ~~~~~l~~l~~-~-p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~ 127 (391)
+.++.+.+++. + |+ .| +++.|++.|+..++..++++||.+++.+=.|..- .......+ ..+..+. ...|..
T Consensus 66 ~LR~~Ia~~y~~v~~d--~I-lvT~Ga~~Al~l~~~~l~~pGD~Viv~~P~Y~~~-~~~~~~~G-~~v~~~~l~~~~~~~ 140 (373)
T PRK07324 66 EFKEAVASLYQNVKPD--NI-LQTNGATGANHLVLYALIEPGDHVISVYPTYQQL-YDIPESLG-AEVDYWKLREENGWL 140 (373)
T ss_pred HHHHHHHHHHCCCCHH--HE-EECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHH-HHHHHHCC-CEEEECCCCCCCCCC
T ss_conf 9999999986699867--88-9868789999999999759999899889985779-99999839-876540767225988
Q ss_pred CCHHHCC-----CCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHHHCC------CCCCCCEEEEECC
Q ss_conf 7867678-----5565799742024202203203-----5025686148864011011025------4556857999700
Q gi|254780153|r 128 PDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVFARH------IDFNKLDVVTFSA 191 (391)
Q Consensus 128 ~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g~~p------~d~~~iDv~~a~s 191 (391)
+++++++ ..+.+.++.--.-||...+..+ .+|..++..+|.|-+=.-...+ .+..+-.+.+.|.
T Consensus 141 ~Dl~~l~~~i~~~tkliil~nP~NPTG~v~s~e~l~~l~~la~~~~i~iisDEiY~~l~~~~~~~s~~~~~~~~I~~~S~ 220 (373)
T PRK07324 141 PDLDELKRLVRPNTKLICINNANNPTGALMDRAFLEEIVEIAKSVDAYVLSDEVYRPLDEEGSFPSIADLYEKGISTNSL 220 (373)
T ss_pred CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCEEEECCC
T ss_conf 79999996188787699979997988977889999999987541785998125542235797501056575575897154
Q ss_pred HHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 1200176651--54456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
-|.++ -||+ |.++.+++.+++....+ + ..+ .++++..-++...+++...+ =+
T Consensus 221 SK~~~-l~GlRiGwiv~~~~li~~~~~~~---------------~-------~~~-i~~~~~~~~~a~~al~~~~~--~l 274 (373)
T PRK07324 221 SKTYS-LPGIRVGWIATNEEVIDIFRKYR---------------D-------YTM-ICAGVFDDMLASLALEHRDA--IL 274 (373)
T ss_pred CCCCC-CCCCEEEEEECCHHHHHHHHHHH---------------H-------HCC-CCHHHHHHHHHHHHHHCHHH--HH
T ss_conf 11256-77743799966999999999998---------------6-------535-56656999999999968399--99
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCC
Q ss_conf 99999999779999999874797167668820036531789824731011373456788899999-88862828726655
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSY 348 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~ 348 (391)
+...+..+++.+.+.+++.+.+.+....++ . -...-+.++.+. .. ..+.. .+.+.|+.+-.|..
T Consensus 275 ~~~~~~~~~n~~~l~~~l~~~~~~~~~~P~--g--g~~~~~~~~~~~-------~~----~~~~~~ll~~~gV~v~PG~~ 339 (373)
T PRK07324 275 ERNRKIVRTNLAILDEWVAKEPRVSYVKPK--A--VSTSFIKLDVDM-------DS----EEFCEKLLKETGVLLVPGNR 339 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEECCC--C--CEEEEEECCCCC-------CH----HHHHHHHHHHCCEEEECCCC
T ss_conf 999999999999999999738885376358--6--147998789998-------99----99999999968999974886
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 67675056861588899999999999999999999
Q gi|254780153|r 349 RDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 349 r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
=..+..|||+... +.++++.-++.|..+.++..
T Consensus 340 F~~~g~~Ri~fa~--~~~~l~egl~RL~~~l~~l~ 372 (373)
T PRK07324 340 FDLEGHVRIGYCC--DTKTLKKGLKKLSEFLRKLD 372 (373)
T ss_pred CCCCCEEEEEEEC--CHHHHHHHHHHHHHHHHHHC
T ss_conf 5899949999819--89999999999999999736
No 178
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.11 E-value=4.6e-08 Score=70.64 Aligned_cols=279 Identities=15% Similarity=0.144 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEEE
Q ss_conf 889999999999999996889985799974873489998753205789707997073688--888765323876306740
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREFT 121 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~~ 121 (391)
.+-.+.+++. |..+=+.. .. +..+||-+|+.+++ .++++|+.+++...-|+. ++........+.+++.++
T Consensus 49 nPT~~~lE~~---la~LEg~~---~a-~~~sSGmaAi~a~l-~~~~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~v~fvd 120 (377)
T PRK07671 49 NPTRAALEEL---IAVLENGH---AG-FAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVD 120 (377)
T ss_pred CHHHHHHHHH---HHHHHCCC---EE-EEECCHHHHHHHHH-HHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEC
T ss_conf 8669999999---99983986---27-75167889999999-98689998998289827789999988863697699943
Q ss_pred CCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC---E--EEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCH
Q ss_conf 57776578676785--5657997420242022032---0--3502568614886401--101102545568579997001
Q gi|254780153|r 122 APYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD---V--GFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQ 192 (391)
Q Consensus 122 ~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~---~--~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQ 192 (391)
.. ++++++. ....-+++.||.+--.... . ..+++++++++|||-+ +-+...|++. ++|+++-|.-
T Consensus 121 ~~-----d~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT~atP~~~~Pl~~-GaDivvhS~T 194 (377)
T PRK07671 121 TT-----NLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTLAKEKGLLTIVDNTFMTPYWQSPISL-GADIVLHSAT 194 (377)
T ss_pred CC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHH-CCCEEEEECC
T ss_conf 88-----86889964788844999978999887501679999999982996985176422022787772-8878999457
Q ss_pred HCCCCCCCC--EEEEEC-HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 200176651--544567-78887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 193 KVLGGEAGF--GIIILS-PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 193 K~l~~ppGl--~~v~~s-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
|-|+|-..+ |.|+.+ ++..++.... . ...|. +++-+.-|.+...| ..+
T Consensus 195 Kyl~GHsD~~~G~vv~~~~~~~~~~~~~------------~--------~~~G~---~lsP~~a~L~lRGL------~TL 245 (377)
T PRK07671 195 KYLGGHSDVVAGLVVVNSPELAEDLHFV------------Q--------NSTGG---ILGPQDSFLLLRGL------KTL 245 (377)
T ss_pred CEECCCCCCCCEEEEECCHHHHHHHHHH------------H--------HHHCC---CCCHHHHHHHHCCC------CCH
T ss_conf 5304787752528996778999999999------------9--------86357---78847778987068------869
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999997799999998747971676-----688200--------3653178982473101137345678889999988
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENL-----AVDETT--------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL 336 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l 336 (391)
.-|.+||.+++..+-+|+++++..... ...|.+ .....++|.+.+. +. ...+...|
T Consensus 246 ~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~~~-------~~----a~~f~~~L 314 (377)
T PRK07671 246 GIRMEEHETNSRAIAEFLNNHPKVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSE-------ET----LNKVLERL 314 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEEEEEECCH-------HH----HHHHHHHC
T ss_conf 99999999999999999861998449967688899259999855899755999993878-------99----99999808
Q ss_pred HHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 862828726655676----------------------75-056861588899999999999999999
Q gi|254780153|r 337 EKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 337 ~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.--..+..+|+.++. .. -+|++.+ .||++.|++-|+.||+
T Consensus 315 ~l~~~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~eDLi~DL~qALa 377 (377)
T PRK07671 315 QYFTLAESLGAVESLISIPAQMTHASIPADRRKELGITDGLIRISVG----IEDGEDLIEDLAQALA 377 (377)
T ss_pred CCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHCC
T ss_conf 82545035687760213861115555999999975979295999933----2999999999998549
No 179
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.10 E-value=2.3e-07 Score=66.21 Aligned_cols=323 Identities=13% Similarity=0.069 Sum_probs=167.7
Q ss_pred CHHHHHHHHHHHCCCCCCCCHH-H-HHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHHHHHHCCC--CCCEEEEE
Q ss_conf 9689999863210365328988-9-999999999999996889985--7999748734899987532057--89707997
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVL-G-KERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEMALWSLLG--YRGVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~-f-~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea~~~nl~~--~~~~~~~~ 97 (391)
+|+ |.+++++++=...|-+.. + .+...+.-+.|.+++ |.++ +++|. .|||.|.|+++.=.-. .+..++..
T Consensus 60 hp~-i~~Av~~q~~~l~~~~~~~~~~~~~~~lae~l~~~~--p~~~~~~v~f~-~sGsEAve~AiklAR~~tgr~~ii~~ 135 (426)
T PRK08088 60 HPK-VVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKV--PGDFAKKTLLV-TTGSEAVENAVKIARAATKRSGVIAF 135 (426)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCEEEEC-CCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 699-999999998647885677556679999999999857--75556558854-97699999999998776436663663
Q ss_pred ECCHHHHHHHHHHHCCCC------------CEEEEECC--C-CCCCC--HHHCC-------CCCCEEEEEEECCCC---E
Q ss_conf 073688888765323876------------30674057--7-76578--67678-------556579974202420---2
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQ------------DVREFTAP--Y-GSLPD--FSKVD-------FDRDVVFVWNGTTSG---V 150 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~------------~~~~~~~~--~-g~~~~--~~~~~-------~~~~v~~~h~ETstG---v 150 (391)
.++|=++......--+.. .+.....| . +...+ ...++ ...+++.+-.|...| +
T Consensus 136 ~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~g~gG~ 215 (426)
T PRK08088 136 TGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGF 215 (426)
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
T ss_conf 57748985212542488777667788999874026688623578816799999999974478776789997775677886
Q ss_pred EECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCC
Q ss_conf 2032------0350256861488640110-110--254--5568579997001200176651544567788876541144
Q gi|254780153|r 151 CVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVP 219 (391)
Q Consensus 151 ~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~ 219 (391)
..+. ...+|+.+++++|+|=|.+ ||- .-+ +..++.-.+...-|+|++===++.++.+++..+.. .+
T Consensus 216 ~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~fa~~~~gv~PDii~~gK~l~gG~Plsav~~~~~i~~~~---~~ 292 (426)
T PRK08088 216 YAASPAFMQRLRALCDQHGIMLIADEVQTGAGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAI---AP 292 (426)
T ss_pred EECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHCCCCCCCCEEECHHHHHHC---CC
T ss_conf 638879999999999876905876330228776674135664198976201214403888750000039999533---68
Q ss_pred CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r 220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299 (391)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~ 299 (391)
...++|+.--|+ ...+..++|+.++++. ..++.+++.+.+.+.+.+..--.+.+.+
T Consensus 293 -------------------~~~~~T~~gnpl-a~Aaa~a~L~~l~~e~----l~~~~~~~G~~l~~~L~~l~~~~p~i~~ 348 (426)
T PRK08088 293 -------------------GGLGGTYAGNPI-ACAAALAVLEVFEEEN----LLQRANALGERLKDGLLAIAEKHPEIGD 348 (426)
T ss_pred -------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf -------------------887888898989-9999999999998658----9999999999999999999860998899
Q ss_pred CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 20036531789824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 300 ~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
-.-+..+...-.+.|+....- .......+...+.+.|.++...| ..++.+|+.--=.++.++|+..++.||.++
T Consensus 349 VRG~GLm~gvelv~~~~~~~p----~~~~~~~i~~~~~~~Gll~~~~g--~~gnvir~~PPL~it~~eid~~~~~l~~al 422 (426)
T PRK08088 349 VRGLGAMIAIELFEDGDHSKP----AAKLTAQIVARARDKGLILLSCG--TYYNVLRILVPLTIEDAQIRQGLEIIAQCF 422 (426)
T ss_pred EEECCEEEEEEEEECCCCCCC----CHHHHHHHHHHHHHCCCEEEECC--CCCCEEEEECCEECCHHHHHHHHHHHHHHH
T ss_conf 994455999998606876787----89999999999996899998338--999989997893478999999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 380 YFQK 383 (391)
Q Consensus 380 ~~~k 383 (391)
.++|
T Consensus 423 ~ea~ 426 (426)
T PRK08088 423 DEAK 426 (426)
T ss_pred HHHC
T ss_conf 9539
No 180
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.10 E-value=3.2e-07 Score=65.31 Aligned_cols=316 Identities=15% Similarity=0.041 Sum_probs=184.8
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHH
Q ss_conf 9999863210365328988999999999999999688998579997487348999875320-578970799707368888
Q gi|254780153|r 27 WSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGW 105 (391)
Q Consensus 27 ~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~ 105 (391)
.|.+.+...-+.. -++ ..+-.+.+.++++.+. ++. ..|||.+.+.++..| +++||.+++..-.|..-
T Consensus 20 ~v~~vl~sg~i~~----G~~---v~~FE~~~ae~~G~k~---ava-~~sgT~AL~laL~al~ig~GDeVI~ps~TfvAT- 87 (374)
T COG0399 20 AVQEVLKSGWLTG----GPF---VRRFEQAFAEYLGVKY---AVA-VSSGTAALHLALLALAIGPGDEVIVPSFTFVAT- 87 (374)
T ss_pred HHHHHHHCCCCCC----CHH---HHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHH-
T ss_conf 9999996197416----867---8999999999849973---999-668489999999964879999799368753988-
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECC--EEEECCCCCCEEEEEECCHHHHCC
Q ss_conf 876532387630674057776578676785-----5657997420242022032--035025686148864011011025
Q gi|254780153|r 106 MSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPD--VGFIPESREGLVICDATSAVFARH 178 (391)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~--~~~~~~~~~~llivD~vSs~g~~p 178 (391)
+..+...|...|-+.-.+.....+++.++. .+.+..||. -|...+. ...++..++..+|-||..++|+.-
T Consensus 88 an~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y 164 (374)
T COG0399 88 ANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRHGLPVIEDAAQAHGATY 164 (374)
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEHH---CCCCCCHHHHHHHHHHCCCEEEEECCHHCCCEE
T ss_conf 99999769967999647641477999999871557749998512---168779899999998739849987603206723
Q ss_pred CC-----CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 45-----5685799970012001766515445677888765411445778312320011232103347864466644889
Q gi|254780153|r 179 ID-----FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCI 253 (391)
Q Consensus 179 ~d-----~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i 253 (391)
=. +..+.+.-+-..|+|..--|=.++.=+++..+++...+..+...+- ..+| .....|.-..-.
T Consensus 165 ~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~-----~~~y-~~~~~G~N~rm~----- 233 (374)
T COG0399 165 KGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDA-----VFKY-LHEELGYNYRLT----- 233 (374)
T ss_pred CCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCC-----CCCC-EEEECCCCCCHH-----
T ss_conf 58425566646899865877655667507983889999999999983767786-----6564-352133003877-----
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 9999999862010318999999997799999998747971676688200-365317898247310113734567888999
Q gi|254780153|r 254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT-RSNTSICMKIVDSDIASLDINSQKSFCKSM 332 (391)
Q Consensus 254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~-rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 332 (391)
.++.++.+.+-+ -++.+.+|-++.++...+.+........-..++.. .+.-..++.+++. . .. ...+
T Consensus 234 -~iqAAigl~QL~-~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-~--~~-------R~~l 301 (374)
T COG0399 234 -EIQAAIGLAQLE-RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-G--IS-------RDAL 301 (374)
T ss_pred -HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCC-C--CC-------HHHH
T ss_conf -999999999998-8899999999999999998610787433578987612303668982677-7--78-------9999
Q ss_pred HHHHHHCCEEECC--C------CCCCC---------------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9988862828726--6------55676---------------75056861588899999999999999999
Q gi|254780153|r 333 LSFLEKEEIAYDI--G------SYRDA---------------PLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 333 ~~~l~~~g~~~~~--~------~~r~~---------------~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
...|.++|+.... . .||.. .+++++-++..++++|++..+++|..++.
T Consensus 302 ~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 302 MESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred HHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99998678775166313443266650445666788228899617487258999899999999999999850
No 181
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.10 E-value=1e-06 Score=62.16 Aligned_cols=328 Identities=13% Similarity=0.090 Sum_probs=168.8
Q ss_pred CCCCCCCCCCCCC-CCHHHHHHHHHHHCCC-CCCCC--HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHH
Q ss_conf 8998886888776-8968999986321036-53289--88999999999999999688998--57999748734899987
Q gi|254780153|r 10 KPKRPFFSSGPCA-KRPGWSLGILEGALLG-RSHRC--VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMA 83 (391)
Q Consensus 10 ~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~-~sHRs--~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~ 83 (391)
.|.=.+|+-|=-. -.|..|++++.+.+-. .+|=+ .-..++-+.+.+.+++-++.+-+ .+|++ +.|++.++..+
T Consensus 29 ~~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~p~~~I~i-t~G~~~al~~~ 107 (390)
T PRK07309 29 IPGILKLTLGEPDFTTPEHVKEAAKAAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILV-TIGATEALSAS 107 (390)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE-CCCHHHHHHHH
T ss_conf 99908998978999988999999999984799999799774999999999999985899998887998-88989999999
Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC--------CCCEEEEEEECCCCEEECC
Q ss_conf 53205789707997073688888765323876306740-57776578676785--------5657997420242022032
Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF--------DRDVVFVWNGTTSGVCVPD 154 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~--------~~~v~~~h~ETstGv~~~~ 154 (391)
+..|+.+||.+++..=.|-. ....+...+. .+..+. ...+...+++.++. .+.+.++.=..-||...+.
T Consensus 108 ~~~l~~pGD~Vli~~P~Y~~-~~~~~~~~g~-~~v~v~~~~~~~~~~~~~le~~~~~~~~k~k~lil~~P~NPtG~v~s~ 185 (390)
T PRK07309 108 LTAILEPGDKVLLPAPAYPG-YEPIVNLVGA-EIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSR 185 (390)
T ss_pred HHHHCCCCCEEEECCCCCHH-HHHHHHHCCC-EEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCH
T ss_conf 99966998989983787441-9999998498-899944620115789999999987488874999978998998887899
Q ss_pred EE-----EECCCCCCEEEEEECCHHH---HCCC-CC----CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCC
Q ss_conf 03-----5025686148864011011---0254-55----68579997001200176651--544567788876541144
Q gi|254780153|r 155 VG-----FIPESREGLVICDATSAVF---ARHI-DF----NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVP 219 (391)
Q Consensus 155 ~~-----~~~~~~~~llivD~vSs~g---~~p~-d~----~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~ 219 (391)
.+ .+|.+++.++|.|-+=+-. +.+. .. .+--+++.|.-|.++. ||+ |.++..++.+++.....
T Consensus 186 e~l~~i~~la~~~~v~iisDEiY~~l~~~~~~~~s~~~~~~d~~i~~~s~SK~~~~-~G~RiG~i~~~~~~~~~~~~~~- 263 (390)
T PRK07309 186 EQIKALAEVLKKYDIFVISDEVYSELTYTGQSHVSIAEYLPDQTILINGLSKSHAM-TGWRIGLIFAPAELTAQLIKSH- 263 (390)
T ss_pred HHHHHHHHHHHHCCEEEEEECCCHHCCCCCCCCCCHHHHCCCCEEEEECCCHHHHC-CCCCEEEEECCHHHHHHHHHHH-
T ss_conf 99999999997689899950551110148988644877555767999606056540-4663589974999999999998-
Q ss_pred CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r 220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299 (391)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~ 299 (391)
..+...+++..-++...++..-.+ -...+.+++.++.+.+++.+.+.+ +....
T Consensus 264 ----------------------~~~~~~~~~~~q~a~~~al~~~~~--~~~~~~~~y~~rr~~l~~~l~~~~-~~~~~-- 316 (390)
T PRK07309 264 ----------------------QYLVTAATTMAQFAAVEALTNGKD--DALPMKKEYIKRRDYIIEKMTALG-FKIIK-- 316 (390)
T ss_pred ----------------------HHHHCCCCHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHCC-CCCCC--
T ss_conf ----------------------653057874999999999974827--899999999999999999998627-86338--
Q ss_pred CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 200365317898247310113734567888999998886282872665-5676750-56861588899999999999999
Q gi|254780153|r 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 300 ~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
|+ +..-+-..+++. ...+ ...+ ...++.+.|+++--|. +...+.+ +|++.. .+.+.++.-++-|+.
T Consensus 317 P~--gg~ylw~~lp~~--~~~d---~~~~---~~~l~~~~gV~v~PG~~Fg~~g~g~iRl~~a--~~~e~l~eal~Rl~~ 384 (390)
T PRK07309 317 PD--GAFYIFAKIPAG--YNQD---SFKF---LQDFAKEKAVAIIPGVAFGPYGEGYVRLSYA--ASMETIKEAMKRLKE 384 (390)
T ss_pred CC--EEEEEEEECCCC--CCCC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHH
T ss_conf 98--006980745789--9989---9999---9999996999997773228899987999982--899999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 378 VFYF 381 (391)
Q Consensus 378 ~~~~ 381 (391)
++++
T Consensus 385 ~l~e 388 (390)
T PRK07309 385 YMEE 388 (390)
T ss_pred HHHH
T ss_conf 9997
No 182
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.10 E-value=8.6e-07 Score=62.58 Aligned_cols=320 Identities=16% Similarity=0.104 Sum_probs=163.4
Q ss_pred CHHHHHHHHHHHCCCCCCC------CHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCCHHHHHHHHHHCC--CCCCEE
Q ss_conf 9689999863210365328------9889999999999999996889985-799974873489998753205--789707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHR------CVLGKERINKAIQLTRKVLEVPENY-RIAIVPASDTGAVEMALWSLL--GYRGVD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHR------s~~f~~i~~~~~~~l~~l~~~p~~y-~v~~l~GsgT~~~ea~~~nl~--~~~~~~ 94 (391)
+|+ |.+++.+++-...|- +++..+ .-+.|.++. |.++ ..+++..||+.++|+++.=.. ..+..+
T Consensus 73 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~----lae~L~~~~--p~~~~~~v~f~~SGsEAvE~AlKlAr~~t~r~~i 145 (454)
T PRK06918 73 HPK-VKEALHKQVDQYIHTGFNVMMYEPYIE----LAEKLAALA--PGSFDKQVLFLNSGAEAVENAVKIARKYTKRQGI 145 (454)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHH----HHHHHHHHC--CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 799-999999998646676777554769999----999999847--7454746998278517999999999987288756
Q ss_pred EEEECCHHHHHHHHHHHCCC----------CCEEEEECC--------CCCCCC------HHHCC-------CCCCEEEEE
Q ss_conf 99707368888876532387----------630674057--------776578------67678-------556579974
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSL----------QDVREFTAP--------YGSLPD------FSKVD-------FDRDVVFVW 143 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~----------~~~~~~~~~--------~g~~~~------~~~~~-------~~~~v~~~h 143 (391)
+...++|=++-..-..--+. ....+...| .+.... +++++ ....++.+-
T Consensus 146 i~~~~~yHG~T~~a~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi 225 (454)
T PRK06918 146 IAFSKGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFIIEEFKNFFISEVAPETIAAVV 225 (454)
T ss_pred EEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 76338717862445653079854224678889983665786423577899766778999999999998624888668999
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEEC
Q ss_conf 202420---22032------035025686148864011011025---4--55685--79997001200176651544567
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILS 207 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s 207 (391)
.|...| +..|. ...+|+++++++|+|=|.+=.++- + +..++ |++ ...|+|++=-=++.++.+
T Consensus 226 ~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gK~lg~G~Plsav~~~ 303 (454)
T PRK06918 226 MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFSRTGKYFAIDHYDVVPDLI--TVSKSLGAGVPISGVIGR 303 (454)
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEE--EECCHHHCCCCCCCEEEC
T ss_conf 968878889866898999999998856491687201124876135740222279898599--977265589987226521
Q ss_pred HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r 208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI 287 (391)
Q Consensus 208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i 287 (391)
++..+... + ...++|+.--| ....+..++|+.++++. ..++.+++.+.+.+.+
T Consensus 304 ~~i~~~~~----~------------------~~~~~Tf~gnp-la~aaa~a~L~~i~~e~----l~~~~~~~G~~l~~~L 356 (454)
T PRK06918 304 KEIMNEAA----P------------------GELGGTYAGSP-LGCAAALAVLDIIEKEN----LNDRAIELGKVVMNRF 356 (454)
T ss_pred HHHHHCCC----C------------------CCCCCCCCCCH-HHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf 88760468----8------------------67156179898-99999999999998668----9999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCEE-EEEE-CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCH
Q ss_conf 747971676688200365317-8982-47310113734567888999998886282872665567675056861588899
Q gi|254780153|r 288 QENDWIENLAVDETTRSNTSI-CMKI-VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEK 365 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~rS~~~v-~~~~-~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~ 365 (391)
+++.--.+.+.+ .|..... .+.+ .|+.... .+......+...+.++|+++...|. -+..+|+.--=.++.
T Consensus 357 ~~l~~~~p~v~~--vRG~Gl~~gvelv~d~~~~~----p~~~~~~~i~~~~~~~Gll~~~~g~--~~~vlr~~PPL~it~ 428 (454)
T PRK06918 357 EEMKNKYNCIGD--VRGLGAMCAFELVQDRKTKE----PDKTLTANLCAEANKRGLLLLSAGT--YGNVIRVLMPLVITD 428 (454)
T ss_pred HHHHHCCCCEEE--EECCCEEEEEEEECCCCCCC----CCHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCH
T ss_conf 999862998688--82264799999950676689----7799999999999968959984688--999899978822899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999877511
Q gi|254780153|r 366 EDLLLLCDWLRWVFYFQKISFLRAI 390 (391)
Q Consensus 366 ~dv~~L~~aLe~~~~~~k~~~~~~~ 390 (391)
++|+..++.||.+++. .+.|+.
T Consensus 429 ~eid~~l~~l~~al~a---~~~~~~ 450 (454)
T PRK06918 429 EQLEEGLTIIEESLQA---CYEKAN 450 (454)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHC
T ss_conf 9999999999999999---999854
No 183
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.09 E-value=1.9e-07 Score=66.78 Aligned_cols=319 Identities=14% Similarity=0.054 Sum_probs=170.6
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHHH
Q ss_conf 999863210365328988999999999999999688998579997487348999875320-5789707997073688888
Q gi|254780153|r 28 SLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGWM 106 (391)
Q Consensus 28 v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~~ 106 (391)
|.+.+....+. + -...++-.+.+.++++.+. ++. ..|||.|.+.++..+ +++||.+++..-.|..- +
T Consensus 16 v~~~l~s~~~~--~-----G~~v~~fE~~~~~~~g~k~---~v~-~~sgT~AL~lal~al~~~~gdeVivp~~tf~at-~ 83 (380)
T TIGR03588 16 VVEVLKSDFLT--Q-----GPTVPAFEEALAEYVGAKY---AVA-FNSATSALHIACLALGVGPGDEVWTTPITFVAT-A 83 (380)
T ss_pred HHHHHHCCCCC--C-----CHHHHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHH-H
T ss_conf 99998479866--8-----9769999999999978594---999-758899999999984999989999678530886-7
Q ss_pred HHHHHCCCCCEEEEE-CCCCCCCCHHHCC---------CCCCEEEEEEECCCCEEECCE--EEECCCCCCEEEEEECCHH
Q ss_conf 765323876306740-5777657867678---------556579974202420220320--3502568614886401101
Q gi|254780153|r 107 SDIRQLSLQDVREFT-APYGSLPDFSKVD---------FDRDVVFVWNGTTSGVCVPDV--GFIPESREGLVICDATSAV 174 (391)
Q Consensus 107 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~---------~~~~v~~~h~ETstGv~~~~~--~~~~~~~~~llivD~vSs~ 174 (391)
.-+...| ..+...+ .+.....+++.++ ..+++..||. -|...+.. ..+|++++..+|-||..++
T Consensus 84 ~ai~~~G-a~pvf~Dvd~~t~~id~~~l~~~it~~~~~ktkaIi~vh~---~G~~~d~~~i~~ia~~~~i~lIEDaA~a~ 159 (380)
T TIGR03588 84 NCALYCG-AKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF---AGKSVDMQAIAALAKKHGLKIIEDASHAL 159 (380)
T ss_pred HHHHHCC-CEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECC---CCEECCHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 9999879-9689984410001489888777776436777259999489---85434899999999986988999880011
Q ss_pred HHCCCC-------CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC--HHHHHHCC-CCCCCC
Q ss_conf 102545-------56857999700120017665154456778887654114457783123200--11232103-347864
Q gi|254780153|r 175 FARHID-------FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV--KGGRVMEG-LFCGET 244 (391)
Q Consensus 175 g~~p~d-------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 244 (391)
|+.-=. +..+.+.-+.+.|.|..--|=.++.=+++..+++......+..-+..... ....+.+. ..-|.-
T Consensus 160 Ga~~~gk~~Gs~~~gd~~~fSF~~~K~ittGeGG~i~tnd~~l~~~~r~lr~~G~~~~~~~~~~~~~~~~~y~~~~~G~N 239 (380)
T TIGR03588 160 GAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFN 239 (380)
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECCCCC
T ss_conf 57757876566443524677335555577788539996999999999999976967773100146788740366347666
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCEEEEEECCCCCCCCCHH
Q ss_conf 466644889999999986201031899999999779999999874797167668820036-5317898247310113734
Q gi|254780153|r 245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS-NTSICMKIVDSDIASLDIN 323 (391)
Q Consensus 245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS-~~~v~~~~~d~~~~~~~~~ 323 (391)
+.-..+++. ....+|+ -++.+.++.++.++...+.+...+.+......+...+ .-..++.+......
T Consensus 240 ~rmseiqAA-ig~~qL~------~ld~~~~~R~~ia~~Y~~~L~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~----- 307 (380)
T TIGR03588 240 YRMTDIQAA-LGLSQLK------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGC----- 307 (380)
T ss_pred CCCCHHHHH-HHHHHHH------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC-----
T ss_conf 543124148-7688888------8999999999999999996478998356746999831568999998266731-----
Q ss_pred HHHHHHHHHHHHHHHCCEEECCCC--------CCC-------------CCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 567888999998886282872665--------567-------------6750568615888999999999999999
Q gi|254780153|r 324 SQKSFCKSMLSFLEKEEIAYDIGS--------YRD-------------APLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 324 ~~~~~~~~~~~~l~~~g~~~~~~~--------~r~-------------~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
....+...|.++|+...... |+. ..+++-+-++..++.+|++..++.|..+
T Consensus 308 ----~r~~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~p~ae~~~~~~l~LP~~~~Lt~~di~~I~~~Ik~v 379 (380)
T TIGR03588 308 ----TRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred ----CHHHHHHHHHHCCCCEEEECCCHHCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf ----499999999977998567230442299888278879987999998497989799998999999999999986
No 184
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.09 E-value=4.6e-07 Score=64.27 Aligned_cols=314 Identities=13% Similarity=0.035 Sum_probs=165.5
Q ss_pred CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---C---C-CC-CE
Q ss_conf 96899998632103653289--88999999999999999688998579997487348999875320---5---7-89-70
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---L---G-YR-GV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~---~-~~-~~ 93 (391)
+|+ |.+++..++=..+|-+ .-..+...+.-+.|.++..-+- .+| |+..|||.|.|+++.=. - + ++ ..
T Consensus 60 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v-~f~~SGsEAvE~AiKlAr~~~~~~g~~~r~~ 136 (423)
T PRK05630 60 HPR-LKAAAQKQIDTMSHVMFGGLTHEPAIKLTHKLLNLTGNPF-DHV-FYSDSGSVSVEVAIKMALQASKGQGHPERTK 136 (423)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CEE-EECCCHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 999-9999999986576734677576899999999987544776-889-9628728999999999999987438987634
Q ss_pred EEEEECCHHHHHHHHHHHCCC----------CCEEEEE--CCCCCCCCH-------HHCC--CCCCEEEEEEECC----C
Q ss_conf 799707368888876532387----------6306740--577765786-------7678--5565799742024----2
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSL----------QDVREFT--APYGSLPDF-------SKVD--FDRDVVFVWNGTT----S 148 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~----------~~~~~~~--~~~g~~~~~-------~~~~--~~~~v~~~h~ETs----t 148 (391)
++...++|-++...-..-.+. ....... .+.-...+. +.++ ....++.+-.|.. -
T Consensus 137 Ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~l~~l~~~~~~~iAAii~EPi~qg~g 216 (423)
T PRK05630 137 LLTWRSGYHGDTFTAMSVCDPENGMHSLWKGTLPEQIFAPAPPVRGSSPQAISEYLDSMELLIDETVSAIIIEPIVQGAG 216 (423)
T ss_pred EEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
T ss_conf 76555850776664541106766655555788987645689986788878999999999874388725999974677779
Q ss_pred CEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHH
Q ss_conf 022032------035025686148864011011025---4--5568579997001200176-651544567788876541
Q gi|254780153|r 149 GVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEK 216 (391)
Q Consensus 149 Gv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~ 216 (391)
|+..|. .+.+|..+++++|+|=|.+=.++- + +.+++-=.+...-|+|++= .-++.++++++..+....
T Consensus 217 G~~~p~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gV~PDivt~gK~l~gG~~Pl~av~~~~~i~~~~~~ 296 (423)
T PRK05630 217 GMRFHDVALIEGVATLCKKHDRFLIVDEIATGFGRTGELFATLSNGVQPDIMCVGKALTGGFMSFAATLCTDKVAQLIST 296 (423)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCHHHHHCCCCCCEEEECCHHHCCCCCEEEEEECHHHHHHHCC
T ss_conf 95679879999999873306805863643205874565202765699776898762432886762799763899975427
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391)
..... ....++|+.--|+ ...+...+|+.++++ ++. .+.+++.+.+.+.++.+.- .+.
T Consensus 297 ~~~~~----------------~~~hg~T~~GnPl-~~Aaa~a~l~~i~~~-~l~---~~~~~~g~~l~~~L~~L~~-~p~ 354 (423)
T PRK05630 297 PNGGG----------------ALMHGPTFMANPL-ACAVSHASLEIIETG-MWQ---KQVKRIEAELIAGLSPLRH-LPG 354 (423)
T ss_pred CCCCC----------------CEEECCCCCCCHH-HHHHHHHHHHHHHHC-CHH---HHHHHHHHHHHHHHHHHCC-CCC
T ss_conf 67887----------------6505479997889-999999999999847-899---9999999999999998706-996
Q ss_pred CCCCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 688200365317-8982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r 297 AVDETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 297 ~~~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
+. +.|....+ .+.+.++.. .+.....+.++|+++.. .++.+|+.--=.++.++|+.+++.|
T Consensus 355 V~--dVRG~Glm~~vel~~~~~-----------~~~~~~~~~~~Gl~~~~-----~g~~l~i~PPL~it~eei~~~~~~l 416 (423)
T PRK05630 355 VA--DVRVLGAIGVIEMEQNVN-----------VEEATQAALDHGVWIRP-----FGRLLYVMPPYITTSEQCAQICTAL 416 (423)
T ss_pred EE--EEEECCEEEEEEECCCCC-----------HHHHHHHHHHCCCEEEE-----CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 78--773055499999568656-----------99999999969947985-----3999999389368999999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780153|r 376 RWVFY 380 (391)
Q Consensus 376 e~~~~ 380 (391)
+.+.+
T Consensus 417 ~~alk 421 (423)
T PRK05630 417 HAAVK 421 (423)
T ss_pred HHHHC
T ss_conf 99977
No 185
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.09 E-value=1.4e-07 Score=67.61 Aligned_cols=302 Identities=17% Similarity=0.094 Sum_probs=161.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..|=+.. .. +..+||-+|+.+++++++++|+.+++...-||.- ++.......+..++.+
T Consensus 67 gNPT~~~lE~~l---a~LEgg~---~a-~~~sSGmAAI~~~ll~ll~~Gdhiv~~~~lYggT~~l~~~~l~~~GI~~~fv 139 (437)
T PRK05613 67 TNPTVEALENRI---ASLEGGV---HA-VAFASGQAATTAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIETTFV 139 (437)
T ss_pred CCHHHHHHHHHH---HHHHCCC---CE-EEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 887899999999---9983998---58-9965899999999999728899899789876347899776775168158994
Q ss_pred ECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEE---CCEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 05777657867678--556579974202420220---3203--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCV---PDVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~---~~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.+. +.+.++ ......+++.||.+--.. ++.. .+++.+++++|||-+ +-+...|++. ++|+++-|.
T Consensus 140 d~~~----d~~~~~~~i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~~~Pl~~-GaDiVvhS~ 214 (437)
T PRK05613 140 ENPD----DPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIIDNTIATAALVRPLEL-GADVVVASL 214 (437)
T ss_pred CCCC----CHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHCCCHHHH-CCCEEEEEC
T ss_conf 7999----99999973787855999987999865335799999999876983995166520310685674-898899955
Q ss_pred HHCCCCCCCC--EEEEECHH-HHHHHHHCCCCCCCCCHH---------HCCHH--------HHHHCCCCCCCCCCCCCHH
Q ss_conf 1200176651--54456778-887654114457783123---------20011--------2321033478644666448
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPA-SVERLEKYVPSWPLPKIF---------RMVKG--------GRVMEGLFCGETINTPSLL 251 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~-al~~~~~~~~~~~~~~~~---------~~~~~--------~~~~~~~~~~~~~~TP~v~ 251 (391)
-|-|+|-.-+ |+|+-+.+ -|..... ....+|.+. .|... .........|. +++-+
T Consensus 215 TKYl~GHsDvlgG~vv~~~~~~w~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~a~~~~~r~~~~~~~G~---~lsP~ 289 (437)
T PRK05613 215 TKFYTGNGSGLGGVLIDGGKFDWTVERD--GKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARVGLLRDTGA---TLSPF 289 (437)
T ss_pred CCCCCCCCCEEEEEEEECCCCCHHHHCC--CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC---CCCHH
T ss_conf 5122688764516998468542222102--332243346873777411565411167799999999985156---78848
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCC---------CCCCEEEEEECCCCC
Q ss_conf 899999999862010318999999997799999998747971676-----688200---------365317898247310
Q gi|254780153|r 252 CIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL-----AVDETT---------RSNTSICMKIVDSDI 317 (391)
Q Consensus 252 ~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~~~---------rS~~~v~~~~~d~~~ 317 (391)
.-|.+. + .-..+.-|.+||.+++..+-+|+++++..... ...|.+ .+-.+++|.+++..
T Consensus 290 ~a~L~l---r---GL~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~~~~G~~~sf~lkg~~- 362 (437)
T PRK05613 290 NAWAAV---Q---GLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLPDSPWYATKEKLGLKYTGSVLTFELKGGK- 362 (437)
T ss_pred HHHHHH---C---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCH-
T ss_conf 889987---3---675088999999999999999985099947798999999832999998589995069999967979-
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------C-CEEEEECCCCCCHHHHHHHHHH
Q ss_conf 1137345678889999988862828726655676----------------------7-5056861588899999999999
Q gi|254780153|r 318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------P-LGLRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~-~~~RIg~~g~i~~~dv~~L~~a 374 (391)
+. ...+...|.-...+..+|+.++. . .-+|++++ .||++.|++-
T Consensus 363 -----~~----a~~f~~~L~lf~~a~SlGg~eSLi~hPa~~th~~~~~e~~~~~Gi~~~lvRlSVG----lEd~eDLiaD 429 (437)
T PRK05613 363 -----DE----AWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGVTQATVRLSVG----IETIDDIIAD 429 (437)
T ss_pred -----HH----HHHHHHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHH
T ss_conf -----99----9999984865412016776550547764345656899999866989494999941----1999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780153|r 375 LRWVFYF 381 (391)
Q Consensus 375 Le~~~~~ 381 (391)
|+.||+.
T Consensus 430 L~qAL~a 436 (437)
T PRK05613 430 LEGGFAA 436 (437)
T ss_pred HHHHHHC
T ss_conf 9999822
No 186
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.09 E-value=6.2e-07 Score=63.46 Aligned_cols=322 Identities=12% Similarity=0.016 Sum_probs=164.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC------C-CCC-E
Q ss_conf 968999986321036532898-89-999999999999996889985799974873489998753205------7-897-0
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL------G-YRG-V 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~------~-~~~-~ 93 (391)
+|+ |.+++.+++-...|-+. .+ .....+.-+.|.++. |.+..-+++..||+.++|+++.=.. + ++. .
T Consensus 63 hp~-i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~~ 139 (441)
T PRK13360 63 RDE-IVEAVRAQAGELDYAPTFQMGHPKAFELATRIAEIA--PGGLNHVFFTNSGSESVDTALKIALAYHRARGQGQRTR 139 (441)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 799-999999998655873467678779999999999857--88868799848789999999999999988609987228
Q ss_pred EEEEECCHHHHHHHHHHHCC---------CCCEEEEECCCCCCC---------C------HHHCC------CCCCEEEEE
Q ss_conf 79970736888887653238---------763067405777657---------8------67678------556579974
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLS---------LQDVREFTAPYGSLP---------D------FSKVD------FDRDVVFVW 143 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~---------~~~~~~~~~~~g~~~---------~------~~~~~------~~~~v~~~h 143 (391)
++...++|=++...-..--+ .........|+...+ + .++++ ....++.+-
T Consensus 140 ii~~~~syHG~t~ga~s~sg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAAii 219 (441)
T PRK13360 140 LIGRERGYHGVGFGGISVGGIAPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVI 219 (441)
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 99327862798846553558875445677889985135887642224334575256799999999999854988579999
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHC---CC--CCCCCEEEEECCHHCCCC-CCCCEEEEECH
Q ss_conf 202420---22032------03502568614886401101102---54--556857999700120017-66515445677
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFAR---HI--DFNKLDVVTFSAQKVLGG-EAGFGIIILSP 208 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~---p~--d~~~iDv~~a~sQK~l~~-ppGl~~v~~s~ 208 (391)
.|...| +..+. ...+|+++++++|+|=|.+=.++ -+ +..++.=.+...-|+|++ -.=++.++.++
T Consensus 220 ~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tG~GRTG~~fa~e~~gv~PDiv~~gKgl~gG~~Plsav~~~~ 299 (441)
T PRK13360 220 VEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSS 299 (441)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEECCCCCCCCEEEECCHHHCCCCCCCEEEECH
T ss_conf 77766778952389999999999986359557720131268623567100168987878997723217873432255249
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
+..+....-.... .. ...++|+.-=|+ ...+..++|+.+++++ ...|.+++.+.+.+.++
T Consensus 300 ~i~~~~~~~~~~~--~~-------------~~hg~T~~Gnpl-acaaa~a~L~~i~~e~----l~~~~~~~g~~l~~~L~ 359 (441)
T PRK13360 300 EIHDAFMQGPEAG--IE-------------FFHGYTYSGHPL-ACAAALATLDLYEREG----LLTRAARLAPYWEDALH 359 (441)
T ss_pred HHHHHHCCCCCCC--CC-------------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHH
T ss_conf 9997433697555--42-------------113677788989-9999999999999748----89999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 479716766882003653178-9824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED 367 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d 367 (391)
+.... +.+. +.|...... +.+..... ........+...+.++|+++... |+.+|+.--=.++.++
T Consensus 360 ~l~~~-~~v~--~VRG~Gl~~giel~~~~~------~~~~~~~~~~~~~~~~Gll~~~~-----gn~irl~PPL~it~~e 425 (441)
T PRK13360 360 SLRDA-PHVI--DIRNLGLVGGIELAPRDG------KPGKRAYEVFLKCFEKGLMIRYT-----GDILALSPPLIIEEAQ 425 (441)
T ss_pred HHHCC-CCEE--EECCCCEEEEEEEECCCC------CHHHHHHHHHHHHHHCCEEEECC-----CCEEEEECCEECCHHH
T ss_conf 86249-9868--851554899999978888------65489999999999699499317-----9989998992088999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780153|r 368 LLLLCDWLRWVFYFQ 382 (391)
Q Consensus 368 v~~L~~aLe~~~~~~ 382 (391)
|+.+++.|+.++.+.
T Consensus 426 id~~~~~l~~aL~e~ 440 (441)
T PRK13360 426 IDELFDIVAQALKET 440 (441)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999956
No 187
>PRK07337 aminotransferase; Validated
Probab=99.09 E-value=1.3e-06 Score=61.47 Aligned_cols=316 Identities=12% Similarity=0.055 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf 68999986321036-532898--899999999999999968899857999748734899987532057897079970736
Q gi|254780153|r 25 PGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF 101 (391)
Q Consensus 25 p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~ 101 (391)
|..+++++.+.+-. ..|=++ =..++-+.+.+.+++-++.+=+-+=++++.|++.++..++..|+++||.+++-.=.|
T Consensus 45 p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~i~pe~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y 124 (388)
T PRK07337 45 PEPVVEAAARALRRGVTQYTSALGLAPLREAIAAHYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSY 124 (388)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 99999999999846999889998879999999999999868999668879848759999999999669999899858873
Q ss_pred HHHHHHHHHHCCCCCEEEEEC-CCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEE
Q ss_conf 888887653238763067405-7776578676785-----565799742024202203203-----50256861488640
Q gi|254780153|r 102 GLGWMSDIRQLSLQDVREFTA-PYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDA 170 (391)
Q Consensus 102 ~~r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~ 170 (391)
..- ...+...++..+.+... ..+..+++++++. .+.+.++.=..-||...+..+ .+|..++.++|.|-
T Consensus 125 p~~-~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~tk~iil~nP~NPtG~v~s~~el~~i~~~a~~~~~~vIsDE 203 (388)
T PRK07337 125 PCN-RHFVAAAEGRPVLVPSGPAERFQLTADDVRTHWGERTRGVLLASPSNPTGTSIEPDELRRIVEAVRARGGFTIVDE 203 (388)
T ss_pred HHH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCC
T ss_conf 659-9999973988999403710067789799998578655399978997988856267774335544314580884576
Q ss_pred CCHHH---HCCC---CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC
Q ss_conf 11011---0254---556857999700120017665--154456778887654114457783123200112321033478
Q gi|254780153|r 171 TSAVF---ARHI---DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG 242 (391)
Q Consensus 171 vSs~g---~~p~---d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (391)
+=+-. +.|. ...+--+.+.|.-|.++ .|| +|.++..++.+++......
T Consensus 204 iY~~l~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~i~p~~li~~~~~~~~----------------------- 259 (388)
T PRK07337 204 IYQGLSYDAAPVSALSLGDDVITINSFSKYFN-MTGWRLGWLVVPPALVGTFEKLAQ----------------------- 259 (388)
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH-----------------------
T ss_conf 41001248998671005785799826654557-866156999988999999999998-----------------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
Q ss_conf 64466644889999999986201031899999999779999999874797167668820036531789824731011373
Q gi|254780153|r 243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI 322 (391)
Q Consensus 243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~ 322 (391)
++...+++..-++...+++. ....-++.+.+.++++.+.+.+.++..++..+..++-.+ -+-..+.. ......
T Consensus 260 ~~~~~~~~~~q~aa~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~P~G~~----~~w~d~~~--~~~~~~ 332 (388)
T PRK07337 260 NLFICASALAQHAALACFEP-DTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAF----YVYADCGG--VAHPAA 332 (388)
T ss_pred HCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE----EEEEECHH--HCCCCC
T ss_conf 54588669999999998482-247999999999999999999999975996465788266----99478642--169999
Q ss_pred HHHHHHHHHHHHH-HHHCCEEECCCC-C-CCCCCE-EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 4567888999998-886282872665-5-676750-568615888999999999999999
Q gi|254780153|r 323 NSQKSFCKSMLSF-LEKEEIAYDIGS-Y-RDAPLG-LRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 323 ~~~~~~~~~~~~~-l~~~g~~~~~~~-~-r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
.. ..++... +.+.|+++--|. + ..-+++ +|++.. .+.+.++.-++-|+.+
T Consensus 333 ~d----~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~iRl~~a--~~~~~l~eal~RL~~~ 386 (388)
T PRK07337 333 GD----SAALTFAMLHDAGVVLVPGMDFGPHAPRDYIRLSYA--TSYSRLEEAVARLGKL 386 (388)
T ss_pred CC----HHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHH
T ss_conf 99----999999999859999977622189999997999971--9999999999999997
No 188
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase; InterPro: IPR010961 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents 5-aminoaevulinic acid (ALA) synthase (2.3.1.37 from EC), which catalyses the first stage of tetrapyrrole biosynthesis by the C4 pathway, namely the condensation of succinyl CoA and glycine. ALA synthase is a pyridoxal-phosphate-dependent enzyme. During catalysis, glycine initially binds to the enzyme cofactor, and after condensation with succinyl CoA, CoA, carbon dioxide and 5-aminolevulinic acid are produced .; GO: 0003870 5-aminolevulinate synthase activity, 0030170 pyridoxal phosphate binding, 0033014 tetrapyrrole biosynthetic process.
Probab=99.09 E-value=2.4e-08 Score=72.44 Aligned_cols=307 Identities=16% Similarity=0.101 Sum_probs=191.1
Q ss_pred CCHHHHHHHHHHHCCC----------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC--C
Q ss_conf 8968999986321036----------532898899999999999999968899857999748734899987532057--8
Q gi|254780153|r 23 KRPGWSLGILEGALLG----------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG--Y 90 (391)
Q Consensus 23 ~~p~~v~~~~~~~~l~----------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~--~ 90 (391)
++|+ |++||.+++.. ||=-...- -+..+-|.+|= -+|. .+++ .||=-++.+++..|-+ |
T Consensus 61 qHp~-Vl~Am~~~~~~~GaGaGGTRNIsGtn~~~----v~LEaELAdLH-~KE~--ALvF-tSgyVaNda~L~tL~k~~P 131 (427)
T TIGR01821 61 QHPK-VLQAMHEALDKVGAGAGGTRNISGTNIYH----VELEAELADLH-GKES--ALVF-TSGYVANDATLATLAKIIP 131 (427)
T ss_pred CCHH-HHHHHHHHHHHCCCCCCCCCCCCCCCHHH----HHHHHHHHHHC-CCCH--HHHH-HHHHHHHHHHHHHHHHHCC
T ss_conf 8654-79889999996388998753656677789----99999997551-7311--3567-7889999999999998708
Q ss_pred CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC------CCCCCEEEEEEECCCCEEECCEEE--ECCCC
Q ss_conf 9707997073688888765323876306740577765786767------855657997420242022032035--02568
Q gi|254780153|r 91 RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV------DFDRDVVFVWNGTTSGVCVPDVGF--IPESR 162 (391)
Q Consensus 91 ~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~v~~~h~ETstGv~~~~~~~--~~~~~ 162 (391)
+-+.+...+.-.. ++.-+........-+-.....+++++ ..+|-++|=..=+-.|-.-|+.++ +++++
T Consensus 132 ~~~ifSD~LNHAS----MI~GIr~S~~~k~iFrHND~~hLe~LL~~~d~~~PKiIAFESvYSMDGd~aPi~eiCDlA~kY 207 (427)
T TIGR01821 132 GCVIFSDELNHAS----MIEGIRRSGAEKFIFRHNDVAHLEKLLQSVDPNAPKIIAFESVYSMDGDIAPIKEICDLADKY 207 (427)
T ss_pred CEEEEECCCCHHH----HHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEHCCCCCCCCCHHHHHHHHHHH
T ss_conf 8589836556356----999987478950563059978999998647799895688610001678726678896688871
Q ss_pred CCEEEEEECCHHH---------HCCC--------C---------------CCCCEEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf 6148864011011---------0254--------5---------------568579997001200176651544567788
Q gi|254780153|r 163 EGLVICDATSAVF---------ARHI--------D---------------FNKLDVVTFSAQKVLGGEAGFGIIILSPAS 210 (391)
Q Consensus 163 ~~llivD~vSs~g---------~~p~--------d---------------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a 210 (391)
|+|..+|=|=++| ++.- + +++||++-..--|++|+..|. |..|.+.
T Consensus 208 GALTy~DEVHAVGlYGprGgGIaErddfeshrasGiatPktndkGGakt~mhriDii~GTLaKAFG~~GGY--Ia~~~~L 285 (427)
T TIGR01821 208 GALTYLDEVHAVGLYGPRGGGIAERDDFESHRASGIATPKTNDKGGAKTLMHRIDIIEGTLAKAFGVVGGY--IAASRKL 285 (427)
T ss_pred CCCCEECCEEEECCCCCCCCCCCHHHHCCHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCCE--EECCCCC
T ss_conf 88630011465336588888512022110000157677765766652001110000016511223444530--2055221
Q ss_pred HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8765411445778312320011232103347864466---6448899999999862010318999999997799999998
Q gi|254780153|r 211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINT---PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI 287 (391)
Q Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T---P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i 287 (391)
.+-... |+ ..++|| ||. ...+..++.+.+++.+|.+.| .+||++++.++..+
T Consensus 286 ~D~~RS------------~A-----------pGFIFTTsLPP~-~~aGA~asIRhLK~~eg~~lR-~~hQ~~~~~lK~~L 340 (427)
T TIGR01821 286 IDAVRS------------YA-----------PGFIFTTSLPPA-IAAGALASIRHLKESEGQDLR-RAHQERVKRLKKLL 340 (427)
T ss_pred EEEEEE------------CC-----------CCCHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHH
T ss_conf 320000------------37-----------842124215589-999999999997513767789-99989999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCC
Q ss_conf 7479716766882003653178982473101137345678889999988862828726655676750---5686158889
Q gi|254780153|r 288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVE 364 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~ 364 (391)
+..+. |....|.+ +|++.+-|+..+ +. -.--+|.+.|+.|..=-|+++++| +||--=+..+
T Consensus 341 ~~~Gl--Pv~~~pSH----IvPv~iGdA~~~--------k~--~SD~LL~~hGIYVQpINyPTVpRG~ERLRitPtP~H~ 404 (427)
T TIGR01821 341 EALGL--PVIDNPSH----IVPVIIGDAAKC--------KK--VSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPVHT 404 (427)
T ss_pred HHCCC--CCCCCCCE----EEEEEECCHHHH--------HH--HHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95777--75488773----887676686889--------89--9898887178157126888898875024426888988
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999998
Q gi|254780153|r 365 KEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 365 ~~dv~~L~~aLe~~~~~~k~~ 385 (391)
+.+++.|++||+.+|.+.-..
T Consensus 405 ~~~id~Lv~AL~~~w~~l~l~ 425 (427)
T TIGR01821 405 DKLIDDLVEALLLVWDRLGLP 425 (427)
T ss_pred HHHHHHHHHHHHHHHHHHCCC
T ss_conf 778999999999998861324
No 189
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.09 E-value=9.5e-07 Score=62.31 Aligned_cols=326 Identities=13% Similarity=0.045 Sum_probs=177.2
Q ss_pred CCCCCC-CCCCCHHHHHHHHHHHCCCC-CCC-C-HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHC
Q ss_conf 886888-77689689999863210365-328-9-88999999999999999688998--579997487348999875320
Q gi|254780153|r 14 PFFSSG-PCAKRPGWSLGILEGALLGR-SHR-C-VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSL 87 (391)
Q Consensus 14 ~~F~pG-P~~~~p~~v~~~~~~~~l~~-sHR-s-~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl 87 (391)
.+|+-| |.--+|..+.+++...+-+. .|- + .-..++-+.+.+.+++.++.+-+ .+| +++.|++.++..++.-+
T Consensus 35 I~l~iG~Pd~~~p~~i~~a~~~~~~~~~~~~y~~~G~~eLReaia~~~~~~~g~~~~pd~~I-~vt~G~~~al~~~~~al 113 (399)
T PRK07681 35 IDLSIGNPDMPPADFVREEMVHTANEKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEV-LLLMGSQDGLVHLPMVY 113 (399)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHHH
T ss_conf 88989889998789999999999718776888988739999999999999868998988849-98688899999999996
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE----
Q ss_conf 578970799707368888876532387630674--057776578676785-----565799742024202203203----
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG---- 156 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~---- 156 (391)
+++||.+++-.=.|..- ...+...+ ..+..+ ..+.+..+++++++. .+.+.++.=..-||...+...
T Consensus 114 ~~pGD~Vli~~P~Y~~y-~~~~~~~g-~~~v~vpl~~e~~~~~d~~~l~~~i~~~tk~iil~~P~NPTG~v~s~e~l~~l 191 (399)
T PRK07681 114 ANPGDIILVPDPGYTAY-ETGIQMAG-ATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEV 191 (399)
T ss_pred CCCCCEEEECCCCCCCH-HHHHHHCC-CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 79999899756874427-99998769-98999505766674368999998532255599976998988877899999999
Q ss_pred -EECCCCCCEEEEEECCHH---HH-CCCC------CCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCC
Q ss_conf -502568614886401101---10-2545------568579997001200176651--5445677888765411445778
Q gi|254780153|r 157 -FIPESREGLVICDATSAV---FA-RHID------FNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPL 223 (391)
Q Consensus 157 -~~~~~~~~llivD~vSs~---g~-~p~d------~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~ 223 (391)
.+|.+++.++|.|-+=+- .+ .+.. ....-+.+.|.-|.++ .||+ |.++..++.+++....+.
T Consensus 192 ~~la~~~~i~iIsDEiY~~l~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~-~~G~RiG~~i~~~~~i~~~~~~~~---- 266 (399)
T PRK07681 192 IAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYS-LAGSRIGYMIGNEEIVRALTQFKS---- 266 (399)
T ss_pred HHHHHHCCCEEECCCCCCCEEECCCCCCCHHHCCCCCCCCCEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH----
T ss_conf 998531363343125511103179887576443354134525322134555-653216999709999999999998----
Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 31232001123210334786446664488999999998620103189999999977999999987479716766882003
Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR 303 (391)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r 303 (391)
.+....+...-++...+|+.-. .=++...+.++++.+.+.+.+...+ +... .|.
T Consensus 267 -------------------~~~~~~~~~~q~aa~~al~~~~--~~~~~~r~~~~~rr~~l~~~L~~~g-~~~~--~P~-- 320 (399)
T PRK07681 267 -------------------NTDYGVFLPIQKAACAALRNGA--AFCEKNREIYQERRDTLVDGFRTFG-WNVD--KPA-- 320 (399)
T ss_pred -------------------HCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEEC--CCC--
T ss_conf -------------------6656745399999999996874--7899999999999999999998759-8633--788--
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHH--
Q ss_conf 65317898247310113734567888999998-886282872665-5676750-568615888999999999999999--
Q gi|254780153|r 304 SNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWV-- 378 (391)
Q Consensus 304 S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~-- 378 (391)
+..-+-..+++. .+ . .++... +.+.|+++-.|. +...+.+ +|++.. .+.+.++.-++-|+.+
T Consensus 321 Gg~y~w~~l~~~----~d---~----~~f~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~f~--~~~e~l~eal~RLk~a~~ 387 (399)
T PRK07681 321 GSMFVWAEIPDG----WT---S----LDFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QDKEVLQQVVENIRNSGI 387 (399)
T ss_pred CEEEEEEECCCC----CC---H----HHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHCCC
T ss_conf 002896889999----99---7----9999999982999998864658999886999971--889999999999988886
Q ss_pred HHHHHHHH
Q ss_conf 99999987
Q gi|254780153|r 379 FYFQKISF 386 (391)
Q Consensus 379 ~~~~k~~~ 386 (391)
|..+|+.-
T Consensus 388 ~~~~~~~~ 395 (399)
T PRK07681 388 FALEKVDE 395 (399)
T ss_pred CHHHHHHH
T ss_conf 56888887
No 190
>PRK07894 consensus
Probab=99.09 E-value=2.1e-07 Score=66.47 Aligned_cols=315 Identities=13% Similarity=0.028 Sum_probs=163.2
Q ss_pred CHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCCC-E
Q ss_conf 96899998632103653289--88999999999999999688998579997487348999875320------5-7897-0
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYRG-V 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~~-~ 93 (391)
+|+ +.+++.+++-...|-+ .-..+-..+.-+.|.++. |.+..-+|+..||+.++|+++.=. . .++. .
T Consensus 69 hp~-i~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~--p~~l~~vff~~sGSeAvE~AiKlAr~y~~~~g~~~r~~ 145 (430)
T PRK07894 69 HPV-LDAALTRQLATMNHVMFGGLTHEPAARLAQLLVDIT--PAGLDTVFFSDSGSVSVEVAVKMALQYWRSRGRPGKHR 145 (430)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 899-999999999757784568757689999999999848--88879799727818899999999999999718877507
Q ss_pred EEEEECCHHHHHHHHHHHC---CCC-----CE--EEEE---CCCCCCC-CHHHC-----CCCCCEEEEEEEC-C---CCE
Q ss_conf 7997073688888765323---876-----30--6740---5777657-86767-----8556579974202-4---202
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQL---SLQ-----DV--REFT---APYGSLP-DFSKV-----DFDRDVVFVWNGT-T---SGV 150 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~---~~~-----~~--~~~~---~~~g~~~-~~~~~-----~~~~~v~~~h~ET-s---tGv 150 (391)
.+...++|-++-..-..-. ++. +. .... .|....+ ..+.+ +....++.+-.|. . -|+
T Consensus 146 ii~~~~sYHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~~~~iAaii~EP~iqg~GG~ 225 (430)
T PRK07894 146 LMTWRGGYHGDTFTPMSVCDPDGGMHSLWTDVLARQVFAPQVPRDYDPAYSAAFEAQLAQHADELAAVIVEPVVQGAGGM 225 (430)
T ss_pred EEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
T ss_conf 99971740477711477533877766666788877666899974326788999999998469986699997874388981
Q ss_pred EECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCC
Q ss_conf 2032------035025686148864011011025---4--5568579997001200176-65154456778887654114
Q gi|254780153|r 151 CVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYV 218 (391)
Q Consensus 151 ~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~ 218 (391)
..|. ...+|+++++++|+|=|.+=.++- + +..++-=.+...-|+|++= .-++.++++++..+......
T Consensus 226 ~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRTG~~fa~e~~gv~PDii~~aKgl~gGy~Pl~avl~~~~i~~~~~~~~ 305 (430)
T PRK07894 226 RFHDPRYLRDLRDICDRHDVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLTLAATLCTADVAHTISAGE 305 (430)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHCCCCCCEEEEECCHHHCCCCCCEEEEEHHHHHHHCCCCC
T ss_conf 02899999999998751276265021311787356763543189886399977354489976201224298997456788
Q ss_pred CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 45778312320011232103347864466644889999999986201031899999999779999999874797167668
Q gi|254780153|r 219 PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAV 298 (391)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~ 298 (391)
. .. ...++|+.- +-....+...+|+.+++++ + .++.+++.+.+.+.++.... .+.+.
T Consensus 306 ~----~~-------------~~Hg~Ty~G-nplacAaala~L~~i~~e~-l---~~~~~~~g~~l~~~L~~l~~-~p~V~ 362 (430)
T PRK07894 306 A----GA-------------LMHGPTFMA-NPLACAVSVASVELLLGQD-W---RTRVAEIEAGLTAGLAPARA-LPGVT 362 (430)
T ss_pred C----CC-------------EEECCCCCC-CHHHHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHCC-CCCEE
T ss_conf 8----86-------------123789888-9899999999999998567-9---99999999999999997457-99769
Q ss_pred CCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8200365317-898247310113734567888999998886282872665567675056861588899999999999999
Q gi|254780153|r 299 DETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 299 ~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
+.|....+ .+.+.++.. .+.......++|+++. ..++.+|+.--=.++.+||+.++++|+.
T Consensus 363 --dVRg~Gl~~~vel~~~~~-----------~~~~~~~a~~~Gvl~r-----~~~n~i~l~PPL~it~~eid~~~~~l~e 424 (430)
T PRK07894 363 --DVRVLGAIGVIELDRPVD-----------LAVATPAALDHGVWLR-----PFRNLVYAMPPYICTPAEIAQITSAMVE 424 (430)
T ss_pred --EECCCCEEEEEEECCCCC-----------HHHHHHHHHHCCCEEE-----ECCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf --894668099999678456-----------8999999997993898-----5499999979946899999999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780153|r 378 VFYFQ 382 (391)
Q Consensus 378 ~~~~~ 382 (391)
+.+++
T Consensus 425 al~~l 429 (430)
T PRK07894 425 VARAL 429 (430)
T ss_pred HHHHH
T ss_conf 99960
No 191
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.09 E-value=2.5e-07 Score=66.03 Aligned_cols=303 Identities=15% Similarity=0.078 Sum_probs=159.6
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEECCH
Q ss_conf 968999986321036532898899999999999999968899857999748734899987532057-89-7079970736
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAWESF 101 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~g~~ 101 (391)
+|+ |.+++.+++-...|.+..+.. +..+.+.+.+--..++.+ ++..|||.++|+++.=.-. .+ ..++...++|
T Consensus 46 ~p~-i~~ai~~q~~~~~~~~~~~~~---~~~~~la~~l~~~~~~~~-~f~~SGSEAve~AlklAr~~tgr~~ii~~~~~y 120 (375)
T PRK04260 46 HPQ-VQQALTDQAGLIWHSPNLYLS---SLQEEVAQKLTGDKDYLA-FFCNSGAEANEAAIKLARKATGKQEIITFQNSF 120 (375)
T ss_pred CHH-HHHHHHHHHHHCCCCCHHHHH---HHHHHHHHHCCCCCCCEE-EECCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 999-999999998565698747788---999999985236667479-970867899999999876547998699977889
Q ss_pred HHHHHHHHHHCCCCCEEEEECC------CCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC------EEEECCCCCC
Q ss_conf 8888876532387630674057------77657867678--556579974202420---22032------0350256861
Q gi|254780153|r 102 GLGWMSDIRQLSLQDVREFTAP------YGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD------VGFIPESREG 164 (391)
Q Consensus 102 ~~r~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~------~~~~~~~~~~ 164 (391)
=++.......-+......-..+ +....+++.++ ..++++.+-.|...| +..+. ...+|+++++
T Consensus 121 HG~t~ga~s~tg~~~~~~~~~~~~p~~~~~~~~d~~~~~~~~~~~iAAiiiEpiqg~~G~~~~~~~yl~~lr~lc~~~gi 200 (375)
T PRK04260 121 HGRTFGAMSATGQDKIKQGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKAFVKALADYCQETGI 200 (375)
T ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 96744012204874334577889987345210458899986377835999981058898757898999999999998476
Q ss_pred EEEEEECCH-HHH--CCC--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf 488640110-110--254--55685--79997001200176651544567788876541144577831232001123210
Q gi|254780153|r 165 LVICDATSA-VFA--RHI--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME 237 (391)
Q Consensus 165 llivD~vSs-~g~--~p~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
++|+|=|.+ ||- ..+ +.+++ |++.. .|+|++=-=++.++.+++..+. +..
T Consensus 201 llI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~--gKglg~G~P~sav~~~~~i~~~-------------~~~-------- 257 (375)
T PRK04260 201 LLIVDEVQTGIGRTGKLYAFEHYGIEPDIFTL--AKGLANGLPVGAMLGKSSLGGA-------------FGY-------- 257 (375)
T ss_pred CEEEECCCCCCCCCCCCCHHHCCCCCCCEEEE--CHHCCCCCCEEEEEECHHHHCC-------------CCC--------
T ss_conf 25730121178765686554316988878987--1010488643999986787446-------------678--------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCC
Q ss_conf 334786446664488999999998620103189999999977999999987479716766882003653178-9824731
Q gi|254780153|r 238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSD 316 (391)
Q Consensus 238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~ 316 (391)
...++|+.--|+ ...+..++|+.+++++ ..++.+++.+.+.+.+....--.+.+. +.|...... +.+..+
T Consensus 258 -~~h~~T~~gnpl-a~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~~~~~~~~i~--~vRG~Gl~~gie~~~~- 328 (375)
T PRK04260 258 -GSHGSTFGGNKL-SMAAAKATLEIMLTAG----FLETVLSKGNKLQEQLQEALQDKETVT--TVRGLGYMIGIETTAD- 328 (375)
T ss_pred -CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHCCCCEE--EEEEEEEEEEEEECCC-
T ss_conf -785777998989-9999999999998646----999999999999999999985399737--6305579999995789-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
...+...+.++|.++...+ +..+|+.--=.++.++++.+++.||.+|
T Consensus 329 ------------~~~~~~~~~~~Gll~~~~g----~nvi~~~Ppl~it~~eid~~~~~l~~vF 375 (375)
T PRK04260 329 ------------LSQLVQAARDKGLIILTAG----TNVIRLLPPLTISKAEIEKGIAILSEIF 375 (375)
T ss_pred ------------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf ------------9999999996896994079----9989998993488999999999999869
No 192
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.08 E-value=7.4e-07 Score=62.98 Aligned_cols=307 Identities=15% Similarity=0.087 Sum_probs=166.7
Q ss_pred CCCCCC--CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf 886888--776896899998632103653289889999999999999996889985799974873489998753205789
Q gi|254780153|r 14 PFFSSG--PCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR 91 (391)
Q Consensus 14 ~~F~pG--P~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~ 91 (391)
.-||.+ |-. +|..+++++...+-. .+|=|+- -..+.++.+.+.++++.+ .|++ ..|++..+..+...+. ++
T Consensus 25 idlSsN~NP~g-ppp~v~~ai~~~~~~-~~~YPd~--~~~~Lr~aiA~~~gv~~e-~I~~-gnGs~Eli~~~~~~~~-~~ 97 (358)
T PRK07392 25 LDFSASINPLG-PPESVIAAIQSALSA-LRHYPDP--DYRELREALAQHHQLPPE-WILP-GNGAAELLTWAGRELA-QL 97 (358)
T ss_pred EECCCCCCCCC-CCHHHHHHHHHHHHH-HHHCCCC--CHHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHC-CC
T ss_conf 66089999989-898999999998888-8648995--689999999998595888-8987-7579999999999975-89
Q ss_pred CEEEEEECCHHHHHHHHHHHCCCCCEEEEECC--CCCCC-CHH---HC-CCCCCEEEEEEECCCCEEECCEEE--ECCCC
Q ss_conf 70799707368888876532387630674057--77657-867---67-855657997420242022032035--02568
Q gi|254780153|r 92 GVDVLAWESFGLGWMSDIRQLSLQDVREFTAP--YGSLP-DFS---KV-DFDRDVVFVWNGTTSGVCVPDVGF--IPESR 162 (391)
Q Consensus 92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~--~g~~~-~~~---~~-~~~~~v~~~h~ETstGv~~~~~~~--~~~~~ 162 (391)
+.+++..=.|+.. ..+.+..+..+..+... .+... ... .. +..+.+.++.=..-||...+..+. +.. +
T Consensus 98 ~~v~i~~Ptf~~Y--~~~~~~~g~~v~~vpl~~~~~~~~~~~~~~~~~~~~~~~i~l~nPNNPTG~~~~~~~l~~l~~-~ 174 (358)
T PRK07392 98 REVYLLTPAFGDY--RRALRAFGATVKELPLPLSGEASLTELQLLPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLE-Q 174 (358)
T ss_pred CEEEEECCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH-C
T ss_conf 8699957851899--999998398899985775556782056788755899878997689999776568799998863-2
Q ss_pred CCEEEEEECCH-HHHCCC-----C-CCCC-E-EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 61488640110-110254-----5-5685-7-999700120017665--1544567788876541144577831232001
Q gi|254780153|r 163 EGLVICDATSA-VFARHI-----D-FNKL-D-VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 163 ~~llivD~vSs-~g~~p~-----d-~~~i-D-v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
..++|+|-.=. |...+- + ..+. . +++-+.-|.++ -|| +|.++.+++.+++..+...+
T Consensus 175 ~~~vvvDEaY~ef~~~~~~~s~~~~~~~~~n~iv~rSfSK~~g-laGlRlGy~ia~~~~i~~l~~~~~p----------- 242 (358)
T PRK07392 175 FALVVVDEAFMDFLPPAAEQSLIPCLAEYPNLIILRSLTKFYS-LPGLRLGYAIAHPDRLQRWQQWRDP----------- 242 (358)
T ss_pred CCEEEEECHHHHHCCCCCCCCHHHHHHCCCCEEEEEECHHHHH-CCCCCCEEEECCHHHHHHHHHHCCC-----------
T ss_conf 8999995715541688655678999753586799961628765-7441000002399999999985388-----------
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-
Q ss_conf 1232103347864466644889999999986201031899999999779999999874797167668820036531789-
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM- 310 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~- 310 (391)
+.-+.....+...+|+ .+.-++...+...+..+.+++.+.+.+++..+. |.++..+
T Consensus 243 --------------~~vn~~a~~aa~aal~---~~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p------s~anF~l~ 299 (358)
T PRK07392 243 --------------WPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLP------SAANFLLV 299 (358)
T ss_pred --------------CCCCHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC------CCCEEEEE
T ss_conf --------------7778999999999825---999999999999999999999997189977888------85049999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECC-CCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 824731011373456788899999-88862828726-65567675-0568615888999999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDI-GSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~-~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
+.+++ ...+.. .|.+.|+++.- ..++..+. -+||+.+ ++++.++|+++|+.++++
T Consensus 300 ~~~~~-------------~~~~~~~ll~~~gI~Vr~~~~f~~~g~~~iRisvg---t~een~~li~al~~iLa~ 357 (358)
T PRK07392 300 QSQGS-------------ALQLQEELLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLLSALAAILAN 357 (358)
T ss_pred ECCCC-------------HHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
T ss_conf 76999-------------99999999971988998688888889998999839---999999999999999706
No 193
>PRK09792 PLP-dependent GABA aminotransferase; Provisional
Probab=99.08 E-value=7.3e-07 Score=63.02 Aligned_cols=319 Identities=14% Similarity=0.060 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEEC
Q ss_conf 96899998632103653289889--9999999999999968899857999748734899987532057-89-70799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~g 99 (391)
+|+ |.+++.+++-...|-+..+ .+-..+.-+.|..+........++|. .|||.++|+++.=.-. .| ..++...+
T Consensus 58 ~p~-v~~Ai~~Q~~~~~~~~~~~~~~~~~~~Lae~l~~~~p~~~~~~v~f~-~SGsEAvE~AiKlAr~~tgr~~ii~~~~ 135 (421)
T PRK09792 58 HPD-LVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFF-TTGAEAVENAVKIARAHTGRPGVIAFSG 135 (421)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE-CCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 899-99999999974467555544656999999999984776787559985-7835799999999887529985999817
Q ss_pred CHHHHHHHHHHHCCCC----------CEEEEECCCCCC-------CCHHHCC-------CCCCEEEEEEECCCC---EEE
Q ss_conf 3688888765323876----------306740577765-------7867678-------556579974202420---220
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQ----------DVREFTAPYGSL-------PDFSKVD-------FDRDVVFVWNGTTSG---VCV 152 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~----------~~~~~~~~~g~~-------~~~~~~~-------~~~~v~~~h~ETstG---v~~ 152 (391)
+|=++......--+.. ...+...|+... ..++.++ ....++.+-.|...| +..
T Consensus 136 sYHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~d~~~~~~~~~~~~~~iAAvi~EPiqg~gG~~~ 215 (421)
T PRK09792 136 GFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNV 215 (421)
T ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 85885230354328976433567889997378078842246662336999999976445667458999656457788230
Q ss_pred CC------EEEECCCCCCEEEEEECCHHHHCC-----CCCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCC
Q ss_conf 32------035025686148864011011025-----455685--79997001200176651544567788876541144
Q gi|254780153|r 153 PD------VGFIPESREGLVICDATSAVFARH-----IDFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVP 219 (391)
Q Consensus 153 ~~------~~~~~~~~~~llivD~vSs~g~~p-----~d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~ 219 (391)
+. ...+|+++++++|+|=|.+=.++- ++..++ |++ ...|+|++=--++.++.+++..+.
T Consensus 216 ~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDii--~~gK~l~gG~P~~av~~~~~v~~~------ 287 (421)
T PRK09792 216 APKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLM--TMAKSLAGGMPLSGVVGNANIMDA------ 287 (421)
T ss_pred CCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCHHHHHHCCCCCEE--EECCCCCCCCCEEEEEECHHHHCC------
T ss_conf 898999999999987396797202210686366522657509998687--643223488771899972888646------
Q ss_pred CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r 220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299 (391)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~ 299 (391)
.. ....++|+. -+-....+...+|+.++++ ++ .+|.+++.+.+...+.....-.+.+.
T Consensus 288 ~~----------------~~~~~~Tf~-Gnpl~~aaa~a~L~ii~~e-~l---~~~v~~~g~~l~~~L~~~~~~~p~v~- 345 (421)
T PRK09792 288 PA----------------PGGLGGTYA-GNPLAVAAAHAVLNIIDKE-SL---CERANQLGQRLKNTLIDAKESVPAIA- 345 (421)
T ss_pred CC----------------CCCCCCCCC-CCHHHHHHHHHHHHHHHHC-CH---HHHHHHHHHHHHHHHHHHHHCCCCEE-
T ss_conf 78----------------776478799-8989999999999999865-89---99999999999999999975699889-
Q ss_pred CCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 200365317-8982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r 300 ETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 300 ~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
+.|..... .+.+.|+..... .....+.+.....++|+++...|. .++.+|+.--=.++.++++..++.|+.+
T Consensus 346 -~VRG~Glm~gvel~d~~~~~p----~~~~~~~i~~~~~~~Gll~~~~g~--~g~~i~~~PPL~it~~eid~~~~il~~a 418 (421)
T PRK09792 346 -AVRGLGSMIAAEFNDPQTGEP----SAAIAQKIQQRALAQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKILQDA 418 (421)
T ss_pred -EEEECEEEEEEEECCCCCCCC----CHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCEECCHHHHHHHHHHHHHH
T ss_conf -854141899999757877883----299999999999977978994489--9898999799238899999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780153|r 379 FYF 381 (391)
Q Consensus 379 ~~~ 381 (391)
+++
T Consensus 419 L~e 421 (421)
T PRK09792 419 LSD 421 (421)
T ss_pred HCC
T ss_conf 639
No 194
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.08 E-value=6.3e-07 Score=63.41 Aligned_cols=323 Identities=13% Similarity=0.035 Sum_probs=171.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCC-CEEEEEE
Q ss_conf 968999986321036532898---89999999999999996889985799974873489998753205-789-7079970
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV---LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYR-GVDVLAW 98 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~---~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~-~~~~~~~ 98 (391)
+|+ |.+++.+++=...|-+. .... ..+.-+.|.+++-..-+..++|. .|||.|+|+++.=-- ..+ ..++...
T Consensus 56 ~p~-i~~Ai~~ql~~l~~~~~~~~~~~~-~~~lae~L~~~~p~~~~~~~~F~-~SGsEAvE~AiKlAr~~tgr~~iis~~ 132 (422)
T PRK07495 56 HPK-VIAAVKAQLDRFTHTCHQVVPYEN-YVRLAERLNALVPGDFEKKTIFV-TTGAEAVENAVKIARAATGRSAVIAFG 132 (422)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHH-HHHHHHHHHHHCCCCCCCEEEEE-CCCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 799-999999998546675566546579-99999999975687745479972-786259999999756527998799987
Q ss_pred CCHHHHHHHHHHHCCCC----------CEEEEECCCC-----CCCC--HHHCC-------CCCCEEEEEEECCCC---EE
Q ss_conf 73688888765323876----------3067405777-----6578--67678-------556579974202420---22
Q gi|254780153|r 99 ESFGLGWMSDIRQLSLQ----------DVREFTAPYG-----SLPD--FSKVD-------FDRDVVFVWNGTTSG---VC 151 (391)
Q Consensus 99 g~~~~r~~~~~~~~~~~----------~~~~~~~~~g-----~~~~--~~~~~-------~~~~v~~~h~ETstG---v~ 151 (391)
++|=++.......-+.. .......|+. ...+ ++.++ ....++.+-.|...| +.
T Consensus 133 ~~yHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAvIvEPiqg~gG~~ 212 (422)
T PRK07495 133 GGFHGRTFMGMALTGKVVPYKVGFGAMPPDVFHVPFPVELHGVSVDQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFY 212 (422)
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCE
T ss_conf 88778642124313887654356788999936707883235776677999999998751687757899966764788866
Q ss_pred ECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC
Q ss_conf 032------0350256861488640110-110--254--55685799970012001766515445677888765411445
Q gi|254780153|r 152 VPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS 220 (391)
Q Consensus 152 ~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~ 220 (391)
.|. .+.+|+++++++|+|=|.+ ||- .-+ +.+++.=.+....|+|++==-++.++.+++..+. ..
T Consensus 213 ~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~Pl~av~~~~~i~~~---~~-- 287 (422)
T PRK07495 213 PAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKSLAGGFPLAAVTGRAEIMDA---PG-- 287 (422)
T ss_pred ECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEECHHHHCCCCCEEEEECHHHHHC---CC--
T ss_conf 3888999999999987396687763010887665502654489998099964154288751688873998835---58--
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~ 300 (391)
....++|+.--|+. ..+..++|+.++++. ..++.+++.+.+.+.+++...-.+.+.
T Consensus 288 -----------------~~~~~~Tf~Gnpla-~aaa~a~L~i~~~~~----l~~~~~~~g~~l~~~L~~l~~~~p~v~-- 343 (422)
T PRK07495 288 -----------------PGGLGGTYGGNPLG-IAAAHAVLDVIEEED----LCERANQLGNRLKQRLASIRETVPEIA-- 343 (422)
T ss_pred -----------------CCCCCCCCCCCHHH-HHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHCCCCEE--
T ss_conf -----------------88866679989899-999999999998648----999999999999999999985499889--
Q ss_pred CCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 003653178-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 301 TTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 301 ~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
+.|...... +.+.++....- ...+...+...+.++|.++...|. .++.+|+.--=.++.++|+.+++.||.++
T Consensus 344 dvRG~GLm~giel~~~~~~~p----~~~~~~~v~~~~~~~Gll~~~~g~--~~nvi~~~PPL~it~~eid~~~~~l~~aL 417 (422)
T PRK07495 344 DIRGPGFMNAVEFNDADTGLP----SAEFANRVRLEALEKGLILLTCGV--HGNVIRFLAPITIQDEVFGEALDILEASI 417 (422)
T ss_pred EEEECCEEEEEEEECCCCCCC----CHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 886245699999833888897----889999999999977988983488--99989997990257999999999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780153|r 380 YFQKI 384 (391)
Q Consensus 380 ~~~k~ 384 (391)
.++++
T Consensus 418 ~E~~a 422 (422)
T PRK07495 418 LEARA 422 (422)
T ss_pred HHHCC
T ss_conf 99609
No 195
>PRK06220 consensus
Probab=99.08 E-value=1.2e-06 Score=61.66 Aligned_cols=326 Identities=16% Similarity=0.114 Sum_probs=171.1
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 8868887768-9689999863210----3653289889999999999999996889985799974873489998753205
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL 88 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~ 88 (391)
.+|+-|=-.. .|..+++++.+.+ .++++- .-..++-+.+.+.+++-++.+=+-+=++++.|++.++..++.-|+
T Consensus 34 i~l~iG~pdf~~p~~i~~a~~~~~~~~~~~Y~~~-~G~~~lreaia~~~~~~~g~~~~pd~I~vt~G~~~al~~~~~~l~ 112 (384)
T PRK06220 34 IHLEVGEPDFPTPECVCEAACAAIERGLTHYTHS-LGLPELREAIAEHYRRRYGVDVDPDQVIVTSGTSPAMLMVFMALL 112 (384)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHC
T ss_conf 7999988999978999999999985499998999-786999999999999986899880128986888999999999981
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE--ECC
Q ss_conf 78970799707368888876532387630674-057776578676785-----5657997420242022032035--025
Q gi|254780153|r 89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF--IPE 160 (391)
Q Consensus 89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~--~~~ 160 (391)
++||.+++-+=.|..- ...+...+...+.+. ....|..+++++++. .+.+.++.-..-||...+..+. +.
T Consensus 113 ~pGD~Vlv~~P~Y~~~-~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~v~s~e~l~~l~- 190 (384)
T PRK06220 113 NKGDEVILSDPHYACY-PNFVKFLGGTPVFVPVYEEDGFQYRPEAIRACLTPRTKAILINSPSNPTGHVLSPERLAGIA- 190 (384)
T ss_pred CCCCEEEECCCCCCCC-HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHH-
T ss_conf 8999899778988763-99999849839992246323767799999974788873999728999878677199999987-
Q ss_pred CCCCEEEEEECCH-H--HHCC---CCCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHH
Q ss_conf 6861488640110-1--1025---45568579997001200176651--5445677888765411445778312320011
Q gi|254780153|r 161 SREGLVICDATSA-V--FARH---IDFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKG 232 (391)
Q Consensus 161 ~~~~llivD~vSs-~--g~~p---~d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~ 232 (391)
+.+.++|.|-+=+ + .+.+ ++...-.+++.|.-|.++ -||+ |.++..++.+++.....
T Consensus 191 ~~~~~vIsDEiY~~l~~~~~~~s~~~~~~~~i~~~S~SK~~~-~~G~RiG~~i~~~~~i~~l~~~~-------------- 255 (384)
T PRK06220 191 SLGIPIISDEIYHGLVYEGREHSILEFTDNAFVLNGFSKLYA-MTGWRLGYLIVPPSCVRALQKLH-------------- 255 (384)
T ss_pred HHCCEEEECCCHHHHCCCCCCCCHHHCCCCEEEEEECHHHCC-CCCCCEEEEEECHHHHHHHHHHH--------------
T ss_conf 309889724626864158998882114787899974235307-86535699998899999999999--------------
Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 23210334786446664488999999998620103189999999977999999987479716766882003653178982
Q gi|254780153|r 233 GRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI 312 (391)
Q Consensus 233 ~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~ 312 (391)
.++...++.+.-++...+|+... .-++.+.++++++.+.+.+.+...+..... .|. -..+..
T Consensus 256 ---------~~~~~~~~~~~q~a~~~al~~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~P~-----g~~y~~ 317 (384)
T PRK06220 256 ---------QNFFICANSVVQEAGIAALKQAQ--EDVARMRQIYNERRQYMIKRLREMGFGIRV--EPT-----GAFYVL 317 (384)
T ss_pred ---------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCC-----EEEEEE
T ss_conf ---------86157898799999999995839--999999999999999999999975998563--898-----526885
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 47310113734567888999998886282872665-5676750-56861588899999999999999999999
Q gi|254780153|r 313 VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 313 ~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
.+......+ ...+ ...++.+.|+++--|. +...+.+ ||++... +++.++.-++-|+.++++.+
T Consensus 318 ~~~~~~~~d---~~~~---~~~ll~~~gV~v~PG~~Fg~~~~g~iRl~f~~--~~e~l~ea~~RL~~~l~~~l 382 (384)
T PRK06220 318 ADARHLSGD---SYAL---AFDILEEAGVGVTPGIDFGNGGEGYLRFSYAN--SLENIAEGLDRLEQFLEKRL 382 (384)
T ss_pred EECCCCCCC---HHHH---HHHHHHHCCEEEECCHHCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHHHHHH
T ss_conf 778878999---9999---99999839999977810088999979999709--99999999999999999870
No 196
>PRK07480 putative aminotransferase; Validated
Probab=99.08 E-value=1e-06 Score=62.05 Aligned_cols=327 Identities=12% Similarity=0.061 Sum_probs=162.9
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH---HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH------HCCC-CCCE
Q ss_conf 968999986321036532898899---99999999999996889985799974873489998753------2057-8970
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK---ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW------SLLG-YRGV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~---~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~------nl~~-~~~~ 93 (391)
+|+ |.+++.+++-..+|-+.-|. +..-+.-++|.+++ |.++.-+++..||+.++|+++. ...+ ++..
T Consensus 71 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~--p~~l~~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~ 147 (459)
T PRK07480 71 RKE-LADAAYRQMRELPYYNTFFKTTHPPVIELAAKLAEVA--PAGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKK 147 (459)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 999-9999999997557702554557889999999999848--8875879970875899999999999999970999870
Q ss_pred -EEEEECCHHHHHHHHHHHCC--------C---CCEEEEECCC--CCC--CCH--------HHCC------CCCCEEEEE
Q ss_conf -79970736888887653238--------7---6306740577--765--786--------7678------556579974
Q gi|254780153|r 94 -DVLAWESFGLGWMSDIRQLS--------L---QDVREFTAPY--GSL--PDF--------SKVD------FDRDVVFVW 143 (391)
Q Consensus 94 -~~~~~g~~~~r~~~~~~~~~--------~---~~~~~~~~~~--g~~--~~~--------~~~~------~~~~v~~~h 143 (391)
++...++|=++...-..--+ . ..+..+..|+ ... .+. ++++ ....++.+-
T Consensus 148 ~ii~~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~v~~P~~~~~~~~~~~~~~~~~~~~~le~~i~e~~~~~iAavi 227 (459)
T PRK07480 148 VVISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGAENVAAFI 227 (459)
T ss_pred EEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 89994586466406666633884323456888888566479874334678986787899999999999850887657876
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---CCC--CCC--EEEEECCHHCCCCC-CCCEEEEE
Q ss_conf 202420---22032------035025686148864011011025---455--685--79997001200176-65154456
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---IDF--NKL--DVVTFSAQKVLGGE-AGFGIIIL 206 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~d~--~~i--Dv~~a~sQK~l~~p-pGl~~v~~ 206 (391)
.|+..| +..+. .+.+|.++++++|+|=|.+=.++- +-+ .++ |++ ..-|+|++= .=++.+++
T Consensus 228 ~EPi~g~gG~~~~p~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDii--~~gKglggG~~Pl~av~~ 305 (459)
T PRK07480 228 GEPIQGAGGVIIPPSTYWPEIQRICRKYDILLVADEVICGFGRTGEWFGHQHFGFEPDLM--TIAKGLTSGYIPMGAVIV 305 (459)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE--EECCCCCCCCCCCEEEEE
T ss_conf 255246688422888999999998864397799973532887554542356779888689--875200289877369987
Q ss_pred CHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 77888765411445778312320011232103347864466644889999999986201031899999999779999999
Q gi|254780153|r 207 SPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQF 286 (391)
Q Consensus 207 s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~ 286 (391)
+++..+..... .. . ...++|+.--|+ ...+...+|+.++++ ++-...+ ++..+.+.+.
T Consensus 306 ~~~i~~~~~~~--~~----~------------~~hg~T~~Gnpl-acaaala~L~~i~~~-~l~~~~~--~~~g~~l~~~ 363 (459)
T PRK07480 306 GDRVAEVLIEE--GG----E------------FNHGFTYSGHPV-AAAVALANLRILRDE-GIVERVR--TDTGPYLQKR 363 (459)
T ss_pred CHHHHHHHHCC--CC----C------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-CHHHHHH--HHHHHHHHHH
T ss_conf 38999876117--87----5------------424778999979-999999999998616-2999999--9999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf 87479716766882003653178982473101137345678889999988862828726655676750568615888999
Q gi|254780153|r 287 IQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKE 366 (391)
Q Consensus 287 i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~ 366 (391)
++.+.. .+.+.+-.-+..+...-.++++..... ..........+...+.++|+++.. .++.+|+.--=.++.+
T Consensus 364 l~~L~~-~p~i~~vRG~Glm~giel~~~~~~~~~-~~~~~~~~~~~~~~~~~~Gll~~~-----~gn~l~l~PPL~it~~ 436 (459)
T PRK07480 364 LRELAD-HPLVGEVRGVGLVGALELVKDKATRER-FAAGGGVGTICRDHCFNNGLIMRA-----VGDRMILSPPLVISRA 436 (459)
T ss_pred HHHHHC-CCCEEEEEECCEEEEEEEECCCCCCCC-CCCHHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHH
T ss_conf 998515-996877230552899997437443445-663368999999999979949961-----6998999788238899
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999
Q gi|254780153|r 367 DLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 367 dv~~L~~aLe~~~~~~k~ 384 (391)
+++.+++.|+.++.+.-+
T Consensus 437 eid~~l~~l~~aL~~~~~ 454 (459)
T PRK07480 437 EIDELVEKARKALDLTAA 454 (459)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999
No 197
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.07 E-value=4.9e-08 Score=70.48 Aligned_cols=326 Identities=11% Similarity=0.033 Sum_probs=158.6
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CCCEEEEE--ECC
Q ss_conf 968999986321036532898899999999999999968899857999748734899987532057-89707997--073
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YRGVDVLA--WES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~~~~~~~--~g~ 100 (391)
+|+ |.+++.+++-.-+|-+.+ ..+--+.-+.|.+++ |.. +.+++..|||.|.|+++.=--. .|...+.. .+.
T Consensus 66 ~p~-i~~Ai~~Ql~~~~~~~~~-~~~~~~~ae~l~~~~--p~~-~~v~F~nSGsEA~e~AlklAR~~tgr~~i~~~~~~~ 140 (431)
T PRK06209 66 YPP-VVEAVREALQDGCNFTRP-SAIELDAAELFLDLI--DGA-EMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHP 140 (431)
T ss_pred CHH-HHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHC--CCC-CEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 699-999999999752655476-589999999999758--986-569872788378999999999975995377705775
Q ss_pred HHH--HHHH--HHHHCCCCC---EEEEECCCCCCCCHHHC-C-CCCCEEEEEEECCCCEEECC-----EEEECCCCCCEE
Q ss_conf 688--8887--653238763---06740577765786767-8-55657997420242022032-----035025686148
Q gi|254780153|r 101 FGL--GWMS--DIRQLSLQD---VREFTAPYGSLPDFSKV-D-FDRDVVFVWNGTTSGVCVPD-----VGFIPESREGLV 166 (391)
Q Consensus 101 ~~~--r~~~--~~~~~~~~~---~~~~~~~~g~~~~~~~~-~-~~~~v~~~h~ETstGv~~~~-----~~~~~~~~~~ll 166 (391)
|.. .|.. .....+... ......+++....++++ + ....++.+-.|...|..-|. .+.+|+++++|+
T Consensus 141 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~y~d~~~le~~~~~~~~~iAAvIvEPi~g~~p~~~fl~~lr~lc~~~giLL 220 (431)
T PRK06209 141 FFSTDDWFIGTTPMSAGIPASVSALTKTFRYNDIASLEALFEDYPGRIACVILEPATADEPQDNFLHEVQRLCHENGALF 220 (431)
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 56435665578765578887545666564765599999987645566678885031377897899999999998729079
Q ss_pred EEEECCH-HHHCC---CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC
Q ss_conf 8640110-11025---4556857999700120017665154456778887654114457783123200112321033478
Q gi|254780153|r 167 ICDATSA-VFARH---IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG 242 (391)
Q Consensus 167 ivD~vSs-~g~~p---~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (391)
|+|=|.+ |-.-. .+.+++.=.+....|+|++==-++.++.+++..+... .... ...+ ....+
T Consensus 221 I~DEV~TGfR~g~~~a~~~~gv~PDi~t~gK~iggG~Pi~Av~g~~eim~~~~-~~~~----------~~~~---~f~~~ 286 (431)
T PRK06209 221 ILDEMITGFRWHMRGAQKLYGIVPDLSCFGKAMGNGFSISALAGKREYMELGG-LEHT----------DFER---VFLLS 286 (431)
T ss_pred EECCCCCCCCCCCCCHHHHCCCCCCEEEEHHHHHCCCCCEEEEEHHHHHHHCC-CCCC----------CCCC---CCCCC
T ss_conf 97056026616752276620899879987013228888057778699764035-5567----------8665---41104
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CEEEEEECCCCCCCCC
Q ss_conf 644666448899999999862010318999999997799999998747971676688200365-3178982473101137
Q gi|254780153|r 243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSN-TSICMKIVDSDIASLD 321 (391)
Q Consensus 243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~-~~v~~~~~d~~~~~~~ 321 (391)
+|+..+|+. +.+..++|+.+++++=+++..+.-+...+.+.+..++.+ ++.+-..+.. ..+.|...+.. ...+
T Consensus 287 ~T~~g~p~~-~AAalatL~~~~~~~l~~~~~~~G~~L~~~l~~l~~~~~----~~~~vr~~G~~~~~~f~~~~~~-~~~~ 360 (431)
T PRK06209 287 TTHGAETHA-LAAAIATMAIYREEDVIERLWEQGAKLAAGVNEAAAEHG----LQDHVRVSGRPCCLTYSTLDGN-GQPS 360 (431)
T ss_pred CCCCCCHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC----CCEEEEEEEEEEEEEEECCCCC-CCCH
T ss_conf 577888799-999999999998544999999999999999999997679----9779976401337899324455-6876
Q ss_pred HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34567888999998886282872665567675056861588899999999999999999999987751
Q gi|254780153|r 322 INSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLRA 389 (391)
Q Consensus 322 ~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~~ 389 (391)
..+...+...+.++|+.. + .+-|+ .+.+++||+..+++++.+|+..|..+..+
T Consensus 361 ----~~~~~~~~~~ml~~Gvl~--------~-~~~iS--~aHt~~di~~~l~a~~~al~~l~~al~~~ 413 (431)
T PRK06209 361 ----QAFRTLFLQEMIRRGVLM--------P-SLVVS--YAHGDADIERTIDAVHGALGVYRRALEDG 413 (431)
T ss_pred ----HHHHHHHHHHHHHCCEEH--------H-HHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf ----999999999999589751--------2-47760--53399999999999999999999999819
No 198
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.07 E-value=1.9e-08 Score=73.10 Aligned_cols=302 Identities=16% Similarity=0.090 Sum_probs=159.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-...+++.... +=+. +.+ ++.+||-+|+.+++++++++|+.+++....||. +.+++.....+..+...
T Consensus 56 gnPT~~~LE~~la~---LEg~---~~a-~~~~SGMaAIs~~ll~ll~~Gd~iv~~~~~Yggt~~l~~~~l~~~gi~~~fv 128 (424)
T PRK06084 56 MNPTNDVLEQRVAA---LEGG---VGA-LAVASGMAAITYAIQTVAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIQTRFA 128 (424)
T ss_pred CCHHHHHHHHHHHH---HHCC---CCE-EEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 88679999999999---8599---848-9954789999999998418999899827985638999999887468615995
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEE---ECCEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--5657997420242022---03203--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVC---VPDVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~---~~~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
... +.+.++. .+...+++.||.+--. .++.. .++++++++++||-+ |-+...|+++ ++|+++-|.
T Consensus 129 d~~-----d~~~~~~~i~~~Tklv~~EsP~NPtl~v~DI~~i~~iA~~~g~~~vVDNT~atP~~~~Pl~~-GaDivvhS~ 202 (424)
T PRK06084 129 AHD-----DIAALEALIDERTKAVFCESIGNPAGNIVDLQALADAAHRHGVPLIVDNTVATPVLCRPFEH-GADIVVHSL 202 (424)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEEC
T ss_conf 886-----77999975487651899843899986503789999999874995995457635232680452-898899966
Q ss_pred HHCCCCCCCC--EEEEECHHHHH-----HHHHCCCCCCCCCHHHCCHH-----------HHHHCCCCCCCCCCCCCHHHH
Q ss_conf 1200176651--54456778887-----65411445778312320011-----------232103347864466644889
Q gi|254780153|r 192 QKVLGGEAGF--GIIILSPASVE-----RLEKYVPSWPLPKIFRMVKG-----------GRVMEGLFCGETINTPSLLCI 253 (391)
Q Consensus 192 QK~l~~ppGl--~~v~~s~~al~-----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~TP~v~~i 253 (391)
-|-++|-.-+ |+|+.+.+... +........ +.+-.+... .+.......|. +.+-+.-
T Consensus 203 TKYi~GHsDvl~G~vi~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~g~~~~i~~~r~~~~~~~G~---~lsp~da 277 (424)
T PRK06084 203 TKYMGGHGTSIGGIVVDSGKFPWAENKERFALLNTPD--PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGA---ALSPFNA 277 (424)
T ss_pred CEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCHHH
T ss_conf 5220588760367897166114767677767753984--6766638998762678999999988750688---7882246
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCC------CCCC---CCEEEEEECCCCCCC
Q ss_conf 9999999862010318999999997799999998747971676-----6882------0036---531789824731011
Q gi|254780153|r 254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL-----AVDE------TTRS---NTSICMKIVDSDIAS 319 (391)
Q Consensus 254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~-----~~~~------~~rS---~~~v~~~~~d~~~~~ 319 (391)
| ..++-+ ..+.-|.+|+.+++..+-+|+++++..... ...| .+.+ ...+.|.+....
T Consensus 278 ~---l~lRGL---~TL~lRm~~~~~nA~~iA~~L~~hp~V~~V~yPgL~shp~~~la~~~~~g~~g~~~sf~l~~~~--- 348 (424)
T PRK06084 278 F---LILQGL---ETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHALARRYLGGKPAAILSFGIKGGQ--- 348 (424)
T ss_pred H---HHHCCC---CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCH---
T ss_conf 8---987577---7199999999998999999987199824798889888823999987358996248999845979---
Q ss_pred CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC----------------------CC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 37345678889999988862828726655676----------------------75-05686158889999999999999
Q gi|254780153|r 320 LDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA----------------------PL-GLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~----------------------~~-~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+. ...+...|.--..++.+|+..+. +. -+|+++| .||++.|++-|+
T Consensus 349 ---~~----~~~f~~~L~lf~~a~SlGg~eSLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSVG----lEd~eDLi~DL~ 417 (424)
T PRK06084 349 ---AA----GARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELERAGVSRDMVRLSIG----IEHIDDIIADLA 417 (424)
T ss_pred ---HH----HHHHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHH
T ss_conf ---99----9999984880515075787752123575154100899999865989496999762----299999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780153|r 377 WVFYFQ 382 (391)
Q Consensus 377 ~~~~~~ 382 (391)
.|+...
T Consensus 418 ~AL~aa 423 (424)
T PRK06084 418 QALAAS 423 (424)
T ss_pred HHHHHC
T ss_conf 999735
No 199
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.07 E-value=5e-07 Score=64.04 Aligned_cols=322 Identities=15% Similarity=0.106 Sum_probs=168.0
Q ss_pred CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEE
Q ss_conf 9689999863210--36532898899999999999999968899--85799974873489998753205--789707997
Q gi|254780153|r 24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPE--NYRIAIVPASDTGAVEMALWSLL--GYRGVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~--~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~ 97 (391)
+|+ |.+++.+++ .+..|-..-....-.+..+.+.+++-.|. +|.|+|..-|||.|+|+++.=.- ..+...+..
T Consensus 57 ~p~-I~~Ai~~ql~~~~~~h~~~~~~~~~~~l~e~l~~~il~p~~l~~~v~F~~~SGSEAvE~AiKlAR~~tgr~~Iis~ 135 (426)
T PRK09264 57 NPV-LKQALIDYLQRDGITHGLDMHTEAKREFLETFERLILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIISF 135 (426)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 799-9999999998548600134212899999999999735755798048955898227999999999983499859998
Q ss_pred ECCHHHHHHHHHH--------H-CCCCCEEEEECCCCC-----CCCHHHCCC--------CCCEEEEEEECCCC---EEE
Q ss_conf 0736888887653--------2-387630674057776-----578676785--------56579974202420---220
Q gi|254780153|r 98 WESFGLGWMSDIR--------Q-LSLQDVREFTAPYGS-----LPDFSKVDF--------DRDVVFVWNGTTSG---VCV 152 (391)
Q Consensus 98 ~g~~~~r~~~~~~--------~-~~~~~~~~~~~~~g~-----~~~~~~~~~--------~~~v~~~h~ETstG---v~~ 152 (391)
.++|=++...... . .+.........|+-. ..+.+.++. ...++.+-.|+..| +..
T Consensus 136 ~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~e~~l~~~~~g~d~iAAviiEPiqg~gG~~~ 215 (426)
T PRK09264 136 TNGFHGMTLGALAVTGNAHKRGGAGVPLNHVTFMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGLNV 215 (426)
T ss_pred ECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 37757874145550378434577889978817727888667870169999999876237888616999878668889824
Q ss_pred CC------EEEECCCCCCEEEEEECCHHHHCCC-----CCCCC--EEEEECCHHCCCC--CCCCEEEEECHHHHHHHHHC
Q ss_conf 32------0350256861488640110110254-----55685--7999700120017--66515445677888765411
Q gi|254780153|r 153 PD------VGFIPESREGLVICDATSAVFARHI-----DFNKL--DVVTFSAQKVLGG--EAGFGIIILSPASVERLEKY 217 (391)
Q Consensus 153 ~~------~~~~~~~~~~llivD~vSs~g~~p~-----d~~~i--Dv~~a~sQK~l~~--ppGl~~v~~s~~al~~~~~~ 217 (391)
|. .+.+|.++++++|+|=|.+=.++-= +.+++ |++ ..-|+|+| .| ++.++.+++. + ..
T Consensus 216 ~p~~yl~~lr~lc~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PDiv--~~gKglsGgg~P-~sav~~~~e~-d---~~ 288 (426)
T PRK09264 216 ASAEWLQRLEKLCRKHDILLIVDDIQAGCGRTGTFFSFEEAGIKPDIV--TLSKSISGYGLP-MALVLIKPEL-D---QW 288 (426)
T ss_pred CCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE--EECHHHCCCCCC-EEEEEECHHH-C---CC
T ss_conf 998999999999987075067332010778677830210479998779--886433689710-4999973444-0---46
Q ss_pred CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 44577831232001123210334786446664488999999998620103189999999977999999987479716-76
Q gi|254780153|r 218 VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE-NL 296 (391)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~-~~ 296 (391)
.+ ...++|+.--|+ ...+...+|+.+++++++ .++.+++.+.+.+.++++-.-. ..
T Consensus 289 ~~-------------------g~h~~Tf~Gnp~-a~aaa~a~L~~~~~~~~l---~~~v~~~g~~l~~~L~~l~~~~~~~ 345 (426)
T PRK09264 289 KP-------------------GEHNGTFRGNNL-AFVTATAALETYWSDDAF---EKEVKRKGELVRERLEEIAAEYPGL 345 (426)
T ss_pred CC-------------------CCCCCCCCCCCH-HHHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 77-------------------544667788829-999999999999871479---9999999999999999999768996
Q ss_pred CCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 6882003653178-982473101137345678889999988862828726655676750568615888999999999999
Q gi|254780153|r 297 AVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 297 ~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
+. +.|...... +.++++. ....+...+.++|+++...|. .+..+|+.--=.++.++++.+++.|
T Consensus 346 v~--dvRG~Glm~giel~~~~-----------~~~~i~~~~~~~Gll~~~~g~--~~~vir~~PPL~it~~eid~~~~~l 410 (426)
T PRK09264 346 GL--SVRGRGMMQGIDFGDGE-----------LAGKICRRAFENGLIIETSGP--NDEVVKLLPPLTIDEEELEEGLDIL 410 (426)
T ss_pred EE--EEEEEEEEEEEEECCHH-----------HHHHHHHHHHHCCCEEEECCC--CCCEEEEECCEECCHHHHHHHHHHH
T ss_conf 27--88860289999937768-----------899999999978988964489--9988999799208899999999999
Q ss_pred HHHHHHHHHHHHHHCC
Q ss_conf 9999999998775119
Q gi|254780153|r 376 RWVFYFQKISFLRAIS 391 (391)
Q Consensus 376 e~~~~~~k~~~~~~~~ 391 (391)
|.++.++=..-.+.+|
T Consensus 411 ~~al~~vl~~~~~~~~ 426 (426)
T PRK09264 411 EEAVAEVLAEKSESAS 426 (426)
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999961143219
No 200
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.06 E-value=3e-07 Score=65.46 Aligned_cols=298 Identities=17% Similarity=0.134 Sum_probs=161.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECC
Q ss_conf 9689999863210365328988999-9999999999996889985799974873489998753205--789707997073
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~ 100 (391)
+|+ |.+++.+++=...|-+..|.. +..++.+.|.+ ...+..+++..||+.++|+++.-.- ..+..++...++
T Consensus 47 ~p~-i~~Ai~~ql~~~~~~~~~~~~~~~~~la~~l~~----~~~~~~v~f~~sGsEAve~AiklAr~~tgr~~ii~~~~~ 121 (377)
T PRK02936 47 HPT-VTKAVQEQLDDIWHVSNLFTNSLQEEVASLLTE----NSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQS 121 (377)
T ss_pred CHH-HHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHC----CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 799-999999998657886620104899999997320----688788999687778999999998875599879998785
Q ss_pred HHHHHHHHHHHCCCCC---------EEEEECCCCCCCCHHHCC--CCCCEEEEEEECCCCE---EECC------EEEECC
Q ss_conf 6888887653238763---------067405777657867678--5565799742024202---2032------035025
Q gi|254780153|r 101 FGLGWMSDIRQLSLQD---------VREFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSGV---CVPD------VGFIPE 160 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv---~~~~------~~~~~~ 160 (391)
|=++...-..--+... ......|+. +++.++ ....++.+-.|...|. ..+. .+.+|+
T Consensus 122 yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~p~~---d~~~l~~~~~~~iAavi~EPiqg~gG~~~~~~~yl~~lr~lc~ 198 (377)
T PRK02936 122 FHGRTFGTMSATGQEKIKEGFGPLLPGFLHVPFN---DIKALEEVMNEEVAAVMLEVVQGEGGVIPADLSFLQEVQTLCK 198 (377)
T ss_pred CCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCC---CHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 5114432001058743345778999981446745---8999985168967899997876788976899999999999999
Q ss_pred CCCCEEEEEECCH-HHH--CCC--CCCCC--EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 6861488640110-110--254--55685--7999700120017665--1544567788876541144577831232001
Q gi|254780153|r 161 SREGLVICDATSA-VFA--RHI--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 161 ~~~~llivD~vSs-~g~--~p~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
++++++|+|=|.+ ||- ..+ +.+++ |++ ...|+|++ | ++.++.+++..+.. .
T Consensus 199 ~~gillI~DEV~tGfGRtG~~~a~e~~gv~PDii--~~gK~l~~--G~P~sav~~~~~i~~~~---~------------- 258 (377)
T PRK02936 199 KFGALLIIDEVQTGIGRTGTLFAYEQFGLEPDIV--TVAKGLGN--GIPVGAMIGKKELGSAF---T------------- 258 (377)
T ss_pred HCCCCEECCCCCCCCCCCCCCCHHHHCCCCCCEE--EEEHHHCC--CCCCCCEECCHHHHHCC---C-------------
T ss_conf 8298457122112776556720364449887678--86201027--89873330328776303---7-------------
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf 123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M 310 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~ 310 (391)
....++|+.-=|+ ...+...+|+.++++. ..++.+++.+.+.+.+...--..+.+. +.|...... +
T Consensus 259 ------~~~~~~T~~gnpl-~~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~~~~~~~~i~--~vRG~Gl~~gi 325 (377)
T PRK02936 259 ------AGSHGSTFGGNYL-AMAAAKEVLQVIKQPS----FLEEVQEKGEYFLQKLQEELQHVECVK--NIRGKGLMIGI 325 (377)
T ss_pred ------CCCCCCCCCCCHH-HHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHHCCCCEE--EEEECCEEEEE
T ss_conf ------8998888985999-9999999999985111----999999999999999999843699667--71255699999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.+.++ ...+...+.++|+++...+ ++.+|+.--=.+++++++.+++.||.++
T Consensus 326 e~~~~-------------~~~~~~~~~~~Gll~~~~g----~~~ir~~PpL~it~~ei~~~l~~l~~aL 377 (377)
T PRK02936 326 ECTHE-------------VAPFIEQLREEGLLVLQAG----PNVIRLLPPLIVTKEELDQAVYMLKKVL 377 (377)
T ss_pred EECCC-------------HHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 97785-------------9999999996992994368----9989996990288999999999999869
No 201
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.06 E-value=1.2e-06 Score=61.66 Aligned_cols=319 Identities=12% Similarity=0.072 Sum_probs=167.6
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHCCC-CCCC-C--HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHH
Q ss_conf 886888776-8968999986321036-5328-9--88999999999999999688998--57999748734899987532
Q gi|254780153|r 14 PFFSSGPCA-KRPGWSLGILEGALLG-RSHR-C--VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 14 ~~F~pGP~~-~~p~~v~~~~~~~~l~-~sHR-s--~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~n 86 (391)
.+|+-|=.. -+|..+++++...+.. ..|. + .--.++-+.+.+.+++-++.+-+ .+| +.+.|++.++..++..
T Consensus 33 i~l~iG~pdf~~P~~i~~a~~~a~~~~~~~gY~~~~G~~~lR~aIa~~~~~~~g~~~~pe~~V-~~t~G~~~al~~~~~a 111 (388)
T PRK07366 33 IDLSLGSSDLPAPAHALEAIAQSLQDPSTHGYLLFHGTLPFREAAAAWYEQRFGLAVDPETEV-LPLIGSQEGTAHLPLA 111 (388)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHHHHH
T ss_conf 987086899998899999999998097676789875789999999999999978988988739-9847889999999999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE---
Q ss_conf 0578970799707368888876532387630674--05777657867678-----5565799742024202203203---
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~--- 156 (391)
++.+||.+++..=.|-.- ...+...+ ..+..+ ..+.+..+++++++ ..+.+.++.=..-||...+..+
T Consensus 112 l~~pGD~Vli~~P~Y~~y-~~~~~~~G-~~~~~vpl~~~~~~~~d~~~l~~~i~~~tk~iil~~P~NPTG~v~s~~~l~~ 189 (388)
T PRK07366 112 LLNPGDFALLLDPGYPSH-AGGVYLAG-GQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQE 189 (388)
T ss_pred HCCCCCEEEEECCCCCCH-HHHHHHCC-CEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEHHHHHH
T ss_conf 669999899825877651-89999859-8579975466679847999998740422829998589898466803888888
Q ss_pred --EECCCCCCEEEEEECCH---HHH-CC------CCCC-CCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCC
Q ss_conf --50256861488640110---110-25------4556-8579997001200176651--54456778887654114457
Q gi|254780153|r 157 --FIPESREGLVICDATSA---VFA-RH------IDFN-KLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSW 221 (391)
Q Consensus 157 --~~~~~~~~llivD~vSs---~g~-~p------~d~~-~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~ 221 (391)
.+|.+++..+|.|-+=+ +.+ .+ .+.. ..-+.+.|.-|.++. ||+ |.++.+++.+++....+..
T Consensus 190 i~~~a~~~~i~lisDEiY~~l~~~~~~~~p~~~~~~~~~~~~i~~~S~SK~f~~-~G~RiG~~i~~~~li~~~~~~~~~- 267 (388)
T PRK07366 190 AVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNM-GGFRIGFAIGNAQLIAALRQIKAV- 267 (388)
T ss_pred HHHHHHHCCEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCC-CCCEEEEEECCHHHHHHHHHHHHH-
T ss_conf 999874055078622021445866876661354257220617997335325788-765189996799999999999875-
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
+.++++.....+...++.. .+.-++.+.+.++++.+.+.+.+++.+ +... .|+
T Consensus 268 ----------------------~~~~~~~~~~~~a~~al~~--~~~~~~~~~~~~~~rr~~~~~~L~~~g-~~~~--~P~ 320 (388)
T PRK07366 268 ----------------------VDFNQYRGILNGAIAALTG--PQACVQQTVQIFRQRRDAFINALHRIG-WPVP--LPE 320 (388)
T ss_pred ----------------------CCCCCHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEE--CCC
T ss_conf ----------------------4765439999999999968--889999999999999999999999779-8750--798
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 0365317898247310113734567888999998886282872665-5676750-5686158889999999999999
Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+..-+-..++.... .+ ...+ ...++.+.|+++--|. +...+.+ +|++.-. +++.++.-++-|+
T Consensus 321 --g~~y~w~~l~~~~~--~~---~~ef---~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~~a~--~~~~l~eal~Rl~ 385 (388)
T PRK07366 321 --ATMYVWAKLPEPWQ--GN---SVEF---CTQLVAQTGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIA 385 (388)
T ss_pred --EEEEEEEECCCCCC--CC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEECC--CHHHHHHHHHHHH
T ss_conf --57799787898788--99---8999---99999839999976646588999869999629--9999999999999
No 202
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.06 E-value=2.9e-07 Score=65.61 Aligned_cols=309 Identities=14% Similarity=0.052 Sum_probs=158.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCC-CEE
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205-------789-707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYR-GVD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~-~~~ 94 (391)
+|+ |.+++.+++-...|-+..|. +-..+.-+.|.+.. +.+ +|+| ..|||.|+|+++.=-. .++ ...
T Consensus 53 ~p~-i~~Ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~--~~~-~v~f-~~sGsEA~e~AlklAr~~~~~~~~~~k~~i 127 (397)
T TIGR03246 53 HPE-LVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDAT--FAD-KVFF-CNSGAEANEAALKLARRYALDKHGADKSEI 127 (397)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCC-EEEE-CCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 889-99999999965777768634889999999997514--877-6997-286778999999999999985179997689
Q ss_pred EEEECCHHHHHHHHHHHCCCCCE---------EEEECCCCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC------
Q ss_conf 99707368888876532387630---------67405777657867678--556579974202420---22032------
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSLQDV---------REFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD------ 154 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~------ 154 (391)
+...++|-++...-...-+.... .....++. +++.++ ..+.++.+-.|...| +..|.
T Consensus 128 is~~~~yHG~t~~~~s~~~~~~~~~~~~p~~~~~~~~~~~---d~~~~~~~~~~~iaAvi~EPv~g~gG~~~~~~~yl~~ 204 (397)
T TIGR03246 128 VAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN---DLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKG 204 (397)
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC---CHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 9972786898564104689965567888999764204523---3999998528873799993877888987388899999
Q ss_pred EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 0350256861488640110-110--254--55685799970012001766515445677888765411445778312320
Q gi|254780153|r 155 VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 155 ~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
.+.+|+++++++|+|=|.+ ||- .-+ +.+++.=.+....|+|++=-=++.++.+++..+... .
T Consensus 205 lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~P~sav~~~~~i~~~~~---~---------- 271 (397)
T TIGR03246 205 LRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGGFPIGAMLTTTEIAAHLK---V---------- 271 (397)
T ss_pred HHHHHHHCCCEEECCCEEECCCCCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEEEECHHHHHHCC---C----------
T ss_conf 999999859358634122078777783143226989987887422468840489974488886518---7----------
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
...++|+..-|+. ..+..++|+.+++++=++ +.+++.+.+.+.+.....-...+.+ .|......
T Consensus 272 ---------~~h~~T~~gnpl~-~aaala~L~~i~~e~l~~----~~~~~g~~l~~~L~~l~~~~~~i~~--VRG~Glm~ 335 (397)
T TIGR03246 272 ---------GTHGTTYGGNPLA-CAVAGKVLDLVNTPELLA----GVKQRHDLFVDGLEKINARYNVFSE--IRGKGLLI 335 (397)
T ss_pred ---------CCCCCCCCCCHHH-HHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHHHCCCEEE--EEECCEEE
T ss_conf ---------7738668829999-999999999998547999----9999999999999998741798775--42243599
Q ss_pred -EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -9824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 310 -MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 310 -~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
+.+.++. ....+.+...+.++|+++...+ ++.+|+.---.+++++++.+++.||.++.++
T Consensus 336 giel~~~~---------~~~a~~i~~~~~~~Gll~~~~g----~n~lrl~PPL~it~eeid~~l~~l~~al~~v 396 (397)
T TIGR03246 336 GAVLTEAY---------QGKAKQFVNAAAEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred EEEECCCC---------CCHHHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99972786---------3359999999997892893079----9979997885189999999999999999986
No 203
>PRK03262 consensus
Probab=99.06 E-value=1e-06 Score=62.09 Aligned_cols=279 Identities=16% Similarity=0.188 Sum_probs=161.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCCEEE
Q ss_conf 289889999999999999996889985799974873489998753205789-7079970736888887653238763067
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGWMSDIRQLSLQDVRE 119 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~ 119 (391)
||=|+-. ..+.++.|.+.++++.+ .|++ ..|++..+..++..++++| +.+++..-.|+.. ...++..+..+..
T Consensus 52 nrYPD~~--~~~Lr~aiA~~~gv~~~-~I~v-GnGSdE~I~~i~~~f~~pg~d~vl~~~PtF~~Y--~~~a~~~g~~~~~ 125 (355)
T PRK03262 52 NRYPECQ--PKAVIENYAQYAGVKPE-QVLV-SRGADEGIELLIRAFCEPGKDAILYCPPTYGMY--AVSAETIGVEIRT 125 (355)
T ss_pred CCCCCCC--HHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHCCCEEEE
T ss_conf 0398998--89999999998685855-7999-378999999999998638997799778885999--9999973983899
Q ss_pred EECCCCCCCCHHH----CCCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-HHHCC--CC-CCCC-EE
Q ss_conf 4057776578676----7855657997420242022032035---025-6861488640110-11025--45-5685-79
Q gi|254780153|r 120 FTAPYGSLPDFSK----VDFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA-VFARH--ID-FNKL-DV 186 (391)
Q Consensus 120 ~~~~~g~~~~~~~----~~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs-~g~~p--~d-~~~i-Dv 186 (391)
+........+++. ++..+.+.+|.=..-||...+..++ +.. ..++++|+|-.=. |...+ .+ ..+. .+
T Consensus 126 vp~~~~~~~dl~~~~~~~~~~klv~l~nPNNPTG~~~~~~el~~l~~~~~~~~lvVvDEAY~eF~~~~s~~~l~~~~~Nl 205 (355)
T PRK03262 126 VPTLENWQLDLQAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPNL 205 (355)
T ss_pred EECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCHHHHHHCCCCE
T ss_conf 64655667689999964048888997689998764469999999997687672898730255436562155676407744
Q ss_pred -EEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf -997001200176651--54456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r 187 -VTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL 263 (391)
Q Consensus 187 -~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i 263 (391)
+.=+--|.+| -||+ |.++.+++.++...+...++.. |++ ...+...+|.
T Consensus 206 iVlRTfSK~~g-LAGlRlGy~ia~~~ii~~l~k~~~p~~v----------------------n~~---~~~~a~~al~-- 257 (355)
T PRK03262 206 VILRTLSKAFA-LAGLRCGFTLANEEVINLLLKVIAPYPL----------------------STP---VADIAAQALS-- 257 (355)
T ss_pred EEEECHHHHHC-CCCCCEEEEECCHHHHHHHHHHCCCCCC----------------------CHH---HHHHHHHHHC--
T ss_conf 67612677724-6653505431799999999984389987----------------------799---9999999972--
Q ss_pred HCCCCH---HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 010318---99999999779999999874797167668820036531789824731011373456788899999888628
Q gi|254780153|r 264 KKMGGL---SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEE 340 (391)
Q Consensus 264 ~~~gGl---~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g 340 (391)
.+ ++ ....+...+..+.+++.+.+.++++.. +-|.+|-.+.-..+ ...+.+.|.++|
T Consensus 258 -~~-~~~~~~~~i~~i~~~R~~l~~~L~~l~~~~~v-----~pS~aNFvl~~~~~-------------~~~~~~~L~~~g 317 (355)
T PRK03262 258 -PQ-GIEAMRERVAQINANRAWLIAALKEIACVEQV-----FDSETNYILARFTA-------------SSAVFKSLWDQG 317 (355)
T ss_pred -CC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-----CCCCCCEEEEECCC-------------HHHHHHHHHHCC
T ss_conf -26-59999999999999999999999848998606-----89978289997899-------------999999999699
Q ss_pred EEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 28726-6556767505686158889999999999999
Q gi|254780153|r 341 IAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 341 ~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+++.- ..+......+||+.+ ++++.++|+++|.
T Consensus 318 IlVR~~~~~~gl~~~lRisig---t~een~~~l~aLk 351 (355)
T PRK03262 318 IILRDQNKQPSLSNCLRITIG---TREECQRVIDALR 351 (355)
T ss_pred CEEEECCCCCCCCCEEEEECC---CHHHHHHHHHHHC
T ss_conf 389668887899998999669---9999999999971
No 204
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.05 E-value=7.7e-07 Score=62.87 Aligned_cols=294 Identities=11% Similarity=0.019 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391)
|..+++++...+-. -+|=|+- -..+.++.+.+.++++.+ .|++.. |++..+..++..+ .+ +.+++..=.|+..
T Consensus 34 p~~v~~a~~~~~~~-l~~YPd~--~~~~Lr~aiA~~~gv~~~-~I~~gn-Gs~e~i~~~~~~~-~~-~~v~i~~Ptf~~Y 106 (354)
T PRK06358 34 PESVKDAITENLDK-LVEYPDI--DYLELRKRIASFEQLDLE-NVILGN-GAAEVIFNIVRVL-KP-KKVLILAPTFSEY 106 (354)
T ss_pred CHHHHHHHHHHHHH-HCCCCCC--CHHHHHHHHHHHHCCCHH-HEEECC-CHHHHHHHHHHHC-CC-CEEEEECCCHHHH
T ss_conf 99999999998766-1018999--779999999998783879-999868-7899999999861-89-9699979887999
Q ss_pred HHHHHHHCCCCCEEEEEC--CCCCCCCHHH---CCC-CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECC-
Q ss_conf 887653238763067405--7776578676---785-5657997420242022032035-----025686148864011-
Q gi|254780153|r 105 WMSDIRQLSLQDVREFTA--PYGSLPDFSK---VDF-DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATS- 172 (391)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~---~~~-~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vS- 172 (391)
..+.+..+..+..... ..+..++.+. +.. .+.+.++.=..-||...+..+. .+..++.++|+|-.=
T Consensus 107 --~~~~~~~g~~v~~~~l~~~~~~~~~~~~l~~~~~~~~~v~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~~vviDEaY~ 184 (354)
T PRK06358 107 --ERALKSVDAEVIYYELKEETNFAINEDVLEKITEEIDLIFLCNPNNPTGQLISKEELKKILEKCEKKNIYVIIDEAFM 184 (354)
T ss_pred --HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHH
T ss_conf --999998498678997770038887999997445577789996899986640679999999987201787999964056
Q ss_pred HHHHCC--CC----CCCC-E-EEEECCHHCCCCCCCC--EEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCC
Q ss_conf 011025--45----5685-7-9997001200176651--544567788-8765411445778312320011232103347
Q gi|254780153|r 173 AVFARH--ID----FNKL-D-VVTFSAQKVLGGEAGF--GIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFC 241 (391)
Q Consensus 173 s~g~~p--~d----~~~i-D-v~~a~sQK~l~~ppGl--~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (391)
.|...+ .. ..+. . ++.-+--|.+| -||+ |.++.+++. .++..+...
T Consensus 185 ef~~~~~~~s~~~~~~~~~nlivlrSfSK~~g-laGlRiGy~i~~~~~i~~~l~~~~~---------------------- 241 (354)
T PRK06358 185 DFVEENETISMIKYLENFKNLIIIRAFTKFFA-IPGLRLGYGLCSNKNLIEKLNQMRE---------------------- 241 (354)
T ss_pred HHHCCCCCCCHHHHHHHCCCEEEEEECCHHHC-CCCHHEEEEEECCHHHHHHHHHCCC----------------------
T ss_conf 76368876667888752376689972516636-7662115654287999999984589----------------------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCC
Q ss_conf 86446664488999999998620103189999999977999999987479716766882003653178-98247310113
Q gi|254780153|r 242 GETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASL 320 (391)
Q Consensus 242 ~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~ 320 (391)
++.-+.+...+...+|+. +.=++...+...+..+.+++.+.+.+++..+. |.+|.. ++++++
T Consensus 242 ---p~~vn~~a~~aa~aal~d---~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p------s~anFvl~~~~~~----- 304 (354)
T PRK06358 242 ---PWSINTFADLAGRVLLED---KNYIKKTIQWIKKEKEFLYNGLSEFKGLTVYE------PSVNFIFFKLNKP----- 304 (354)
T ss_pred ---CCCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC------CCCEEEEEEECCH-----
T ss_conf ---988269999999999529---99999999999999999999987499968889------9848999983987-----
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECC-CCCCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7345678889999988862828726-655676750-5686158889999999999999999
Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDI-GSYRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~-~~~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.++...|.++|+++.- ..++..+.+ +||+.+ ++++.++|+++|+..+
T Consensus 305 ---------~~~~~~L~~~gIlVr~~~~f~~l~~~~iRisvg---t~~en~~ll~aL~~iL 353 (354)
T PRK06358 305 ---------IDLRKELLLKGILIRSCSNYRGLDENYYRVAVK---SREDNKKLLEALSVIL 353 (354)
T ss_pred ---------HHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHH
T ss_conf ---------999999985991999788778889997999628---9999999999999974
No 205
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.05 E-value=2.1e-07 Score=66.52 Aligned_cols=306 Identities=13% Similarity=0.123 Sum_probs=161.2
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---------CCC-C
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205---------789-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---------GYR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---------~~~-~ 92 (391)
+|+ |.+++.+++-...|-+..|. +-..+..+.|. ..+...+++|. .|||.+.|+++.-.. ..+ .
T Consensus 62 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~l~~~l~---~~~~~~~v~f~-~SGsEAve~AiklAr~~~~~~~g~~tgr~ 136 (404)
T PRK00854 62 HPK-ILAAMVEQAGRLTLTSRAFRNDQLAPLYEELA---ALTGSHKVLPM-NSGAEAVETAIKAVRKWGYEVKGVPEGQA 136 (404)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH---HCCCCCEEEEC-CCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 799-99999999856786555426579999999997---40376848855-87799999999999998765037878985
Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCEE---------EEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------
Q ss_conf 07997073688888765323876306---------7405777657867678556579974202420---22032------
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------ 154 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------ 154 (391)
.++...++|-++......--...... ....|++....++.. ...+.+.+-.|...| +..|.
T Consensus 137 ~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~d~~~l~~~-~~~~~aAviiEPiqg~gG~~~~~~~yl~~ 215 (404)
T PRK00854 137 EIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPFGDAAALEAA-ITPNTVAFLIEPIQGEAGVIIPPAGYFRR 215 (404)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHH-HCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 59996456678601354346774335688899998155056668999986-39874899991775778961799899999
Q ss_pred EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 035025686148864011011025---4--5568579997001200176-651544567788876541144577831232
Q gi|254780153|r 155 VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 155 ~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
.+.+|+++++++|+|=|.+=.++- + +..++--.+...-|+|++= .-++.++.+++..+... +
T Consensus 216 lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDii~~gKgl~gG~~Pl~av~~~~~i~~~~~---~--------- 283 (404)
T PRK00854 216 VRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLR---P--------- 283 (404)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCEEECCHHHHHHCC---C---------
T ss_conf 9999997076445750001786355741455424897989756444588765320204799995067---9---------
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI 308 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v 308 (391)
...++|+.- +-....+..++|+.+++++ ..++.+++.+.+.+.+.... .+++. +.|.....
T Consensus 284 ----------~~h~~T~~g-npla~aaa~a~l~~i~~e~----l~~~~~~~g~~l~~~L~~l~--~~~i~--~VRG~Glm 344 (404)
T PRK00854 284 ----------GQHGSTFGG-NPLACAVARAALRVLVEEG----MIENAAEQGAYFLEGLRAIR--GNIVR--EVRGRGLM 344 (404)
T ss_pred ----------CCCCCCCCC-CHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHCC--CCCEE--EEEECCEE
T ss_conf ----------887788898-9899999999999998658----99999999999999998504--89727--66444559
Q ss_pred E-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8-98247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r 309 C-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 309 ~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
. +.+ ++. ....+.+...+.+.|+++.. . .+..+|+.--=.++.++++.+++.||.+++
T Consensus 345 ~gve~-~~~---------~~~~~~~~~~~~~~Gll~~~-~---~~~~ir~~PPL~it~~eid~~l~~l~~~La 403 (404)
T PRK00854 345 LAVEL-EPE---------AGGARQYCEALKARGLLAKD-T---HDHTIRLAPPLVITREQVDWAVSQIAKVLA 403 (404)
T ss_pred EEEEE-ECC---------HHHHHHHHHHHHHCCEEECC-C---CCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99998-556---------67799999999979959874-8---999899979957899999999999999966
No 206
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.04 E-value=1.4e-06 Score=61.19 Aligned_cols=282 Identities=13% Similarity=0.103 Sum_probs=159.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCCEEE
Q ss_conf 289889999999999999996889985799974873489998753205789-7079970736888887653238763067
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGWMSDIRQLSLQDVRE 119 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~ 119 (391)
+|=|+ .-..+.++.|.+.++++.+ .|++ .-|+...+..++..++.++ +.+++..-.|+.. ..+++..+..+..
T Consensus 52 ~RYPD--~~~~~Lr~~lA~~~gv~~~-~I~~-GnGSdE~I~ll~~a~~~pg~d~vl~~~PtF~~Y--~~~a~~~g~~~~~ 125 (362)
T PRK04781 52 RRYPD--PQPKGLRSALAALYGCAPE-QLLI-GRGSDEAIDLLVRGLCVPERDAVLVTPPVFGMY--AVCARLQNAPLVE 125 (362)
T ss_pred CCCCC--CCHHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHCCCEEEE
T ss_conf 47989--9889999999998686955-7998-367899999999999558985488479746899--9999983987999
Q ss_pred EE---CCCCCCCCHHHC------CCCCCEEEEEEECCCCEEECCEEE--EC-C-CCCCEEEEEECC-HHHHCC--CC-CC
Q ss_conf 40---577765786767------855657997420242022032035--02-5-686148864011-011025--45-56
Q gi|254780153|r 120 FT---APYGSLPDFSKV------DFDRDVVFVWNGTTSGVCVPDVGF--IP-E-SREGLVICDATS-AVFARH--ID-FN 182 (391)
Q Consensus 120 ~~---~~~g~~~~~~~~------~~~~~v~~~h~ETstGv~~~~~~~--~~-~-~~~~llivD~vS-s~g~~p--~d-~~ 182 (391)
+. .+.+...+++.+ +..+.+.+|+=..-||...+..++ +. . ..++++|||=.= .|...+ ++ ..
T Consensus 126 vpl~~~~~~f~~d~~~~~~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~~~~~~~~~~lvvvDEAY~eF~~~~s~~~l~~ 205 (362)
T PRK04781 126 VPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIETALQALQGKALVVVDEAYGEFSDVPSAVGLLA 205 (362)
T ss_pred EECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCHHHHHH
T ss_conf 95755512467799999988526798889986898973556798999999975799808998341655257843445765
Q ss_pred CC-EE-EEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 85-79-99700120017665--1544567788876541144577831232001123210334786446664488999999
Q gi|254780153|r 183 KL-DV-VTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYID 258 (391)
Q Consensus 183 ~i-Dv-~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~ 258 (391)
+. .+ +.=+--|.+| -|| +|+++.+++.++...+.+.++ .-++....+...
T Consensus 206 ~~~NliVlRTfSK~yg-LAGlRlGy~ia~~~~i~~l~k~~~p~-------------------------~v~~~a~~~a~~ 259 (362)
T PRK04781 206 RYDNLAVLRTLSKAHA-LAAARIGSLIANAELIAVLRRCQAPY-------------------------PVPTPCAAMAEQ 259 (362)
T ss_pred CCCCEEEEECHHHHHH-CCCCCEEEEECCHHHHHHHHHHCCCC-------------------------CCCHHHHHHHHH
T ss_conf 1785453314058740-75535044417999999999821798-------------------------875999999999
Q ss_pred HHHHHHCCCCHHHHHHH---HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99862010318999999---997799999998747971676688200365317898-24731011373456788899999
Q gi|254780153|r 259 ALLWLKKMGGLSACVER---CNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQKSFCKSMLS 334 (391)
Q Consensus 259 ~l~~i~~~gGl~~~~~r---~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~~~~~~~~~ 334 (391)
+|+ ..+++...++ .....+.+++.+...+++... +-|.+|..+. +++ .+.+.+
T Consensus 260 al~----~~~~~~~~~~v~~i~~eR~~l~~~L~~l~g~~~v-----~pS~aNFil~~~~~--------------a~~~~~ 316 (362)
T PRK04781 260 ALS----APALAVTARRVAEVRAERERLHAALAQLPGVRQV-----YPSQGNFLLVRFDD--------------AEAAFQ 316 (362)
T ss_pred HHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-----CCCCCEEEEEECCC--------------HHHHHH
T ss_conf 960----7669999999999999999999999847898556-----89988499987799--------------999999
Q ss_pred HHHHCCEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8886282872-665567675056861588899999999999999999
Q gi|254780153|r 335 FLEKEEIAYD-IGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 335 ~l~~~g~~~~-~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.|.++|+++. ...+...+..+||+.+ ++++.++|+++|+...+
T Consensus 317 ~L~~~gIlVR~~~~~p~l~~~lRisig---t~een~~ll~aL~~i~e 360 (362)
T PRK04781 317 ALLAAGVVVRDQRAVPRLSDALRITIG---TPEQNDRVLAALQRTQE 360 (362)
T ss_pred HHHHCCCEEEECCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHHH
T ss_conf 999499399707887899997999809---99999999999999996
No 207
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.04 E-value=8.2e-07 Score=62.69 Aligned_cols=320 Identities=13% Similarity=0.072 Sum_probs=171.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 96899998632103653289889--999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|+ +.+++.+++-...|-+..+ .+-..+.-+.|.+++-.....+++|. .|||.|+|+++.=.- ..+..++...+
T Consensus 58 ~p~-i~~Ai~~Ql~~l~~~~~~~~~~~~~~~lae~l~~~~p~~g~~~v~f~-~SGSEAve~AiKlAr~~tgr~~ii~~~~ 135 (421)
T PRK06777 58 HPK-VMAAVRQQLDQFTHTAYQIVPYASYVTLAERINSLAPISGNSKTAFF-TTGAEAVENAVKIARAATGRPGVIAFSG 135 (421)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE-CCHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 899-99999999861357455455666999999999974776676449996-7827899999999998639996377578
Q ss_pred CHHHHHHHHHHHCCCC------------CEEEEECCCCC-CCCH----HHCC-------CCCCEEEEEEECCCC---EEE
Q ss_conf 3688888765323876------------30674057776-5786----7678-------556579974202420---220
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQ------------DVREFTAPYGS-LPDF----SKVD-------FDRDVVFVWNGTTSG---VCV 152 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~------------~~~~~~~~~g~-~~~~----~~~~-------~~~~v~~~h~ETstG---v~~ 152 (391)
+|=++...-..--+.. .+.....|... .... +.++ ....++.+-.|...| +..
T Consensus 136 syHG~t~~a~s~tg~~~~~~~~~~p~p~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAvi~EPiqg~gG~~~ 215 (421)
T PRK06777 136 AFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELYGVSVEEAISSVERLFRCDISPTQVAAILLEPIQGEGGFNI 215 (421)
T ss_pred CCCCCCHHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEE
T ss_conf 76996343300158877544677899986022368972246568999999999997505888589999835437888640
Q ss_pred CC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCC
Q ss_conf 32------035025686148864011011025---4--556857999700120017665154456778887654114457
Q gi|254780153|r 153 PD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSW 221 (391)
Q Consensus 153 ~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~ 221 (391)
+. .+.+|+++++++|+|=|.+=.++- + +..++.=.+...-|+|++=-=++.++.+++..+.. .
T Consensus 216 ~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~P~~av~~~~~i~~~~---~--- 289 (421)
T PRK06777 216 APPEFVSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDTKVDLITMAKSLGGGMPISAVTGRADVMDAP---L--- 289 (421)
T ss_pred CCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCEEEEEECHHHHCCC---C---
T ss_conf 9999999999999983977971121106775678434315877797887440025876507898627875257---8---
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
....++|+.--|+ ...+..++|+.+++++ +.+|.+++.+.+.+.+++...-.+.+.+
T Consensus 290 ----------------~~~~~~Tf~G~pl-~caaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~~~p~v~d-- 346 (421)
T PRK06777 290 ----------------PGGLGGTYAGNPL-AVAAALAVLDVIAEEK----LCERALILGAKLVEVLEKAQMSNAAIVG-- 346 (421)
T ss_pred ----------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCEEE--
T ss_conf ----------------8763788998989-9999999999998635----9999999999999999998855898898--
Q ss_pred CCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 03653178-98247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r 302 TRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 302 ~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.|...... +.+.|+....-.. ...+.+...+.++|+++...|. .++.+|+.--=.++.++++..++.||.+++
T Consensus 347 VRG~GL~~gie~~d~~~~~~~~----~~~~~i~~~~~~~Glll~~~g~--~~nvir~~PPL~it~~eid~~~~il~~aL~ 420 (421)
T PRK06777 347 IRARGSMVAVEFNDPVTGKPSP----ELTRAYQRQALEEGLLLLSCGV--HGNVIRFLYPLTIPDKQFKKAMNILTRLLA 420 (421)
T ss_pred EECCEEEEEEEECCCCCCCCCH----HHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 6236489999971687789589----9999999999978988984589--999899979954789999999999999974
No 208
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.04 E-value=1.3e-06 Score=61.43 Aligned_cols=327 Identities=11% Similarity=0.032 Sum_probs=174.4
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHCCC-CCC-CC--HHHHHHHHHHHHHHHHHHCCCCCC--EEEEECCCCHHHHHHHHHH
Q ss_conf 886888776-8968999986321036-532-89--889999999999999996889985--7999748734899987532
Q gi|254780153|r 14 PFFSSGPCA-KRPGWSLGILEGALLG-RSH-RC--VLGKERINKAIQLTRKVLEVPENY--RIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 14 ~~F~pGP~~-~~p~~v~~~~~~~~l~-~sH-Rs--~~f~~i~~~~~~~l~~l~~~p~~y--~v~~l~GsgT~~~ea~~~n 86 (391)
.+|+-|=.. -+|..+++++...+-. ..| -+ .-..++-+.+-+.+++-+++.-+- +|+ ++.|++.++..++..
T Consensus 36 i~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~gY~~~~G~~eLR~aia~~~~~~~g~~~~p~~~I~-vt~Ga~~al~~~~~a 114 (403)
T PRK08636 36 IDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPDTEVV-ATMGSKEGYVHLVQA 114 (403)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE-EECCHHHHHHHHHHH
T ss_conf 8897968999879999999999976998878999747299999999999997099999987499-917989999999999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC--CCCC-------CCCHHHC-----CCCCCEEEEEEECCCCEEE
Q ss_conf 057897079970736888887653238763067405--7776-------5786767-----8556579974202420220
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA--PYGS-------LPDFSKV-----DFDRDVVFVWNGTTSGVCV 152 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~--~~g~-------~~~~~~~-----~~~~~v~~~h~ETstGv~~ 152 (391)
++++||.+++..=.|.... ..+...+ ..+..+.. ..+. ..+++.. +..+.+.++.=..-||...
T Consensus 115 l~~pGD~Vli~~P~Y~~y~-~~~~~~g-~~~~~~~l~~~~~~~~d~~~~~~~le~~~~~~~~ktk~iiln~P~NPTG~v~ 192 (403)
T PRK08636 115 ITNPGDVAIVPDPAYPIHS-QAFILAG-GNVHKMPLEYNEDFELDEDKFFENLEKALRESSPKPKYVVVNFPHNPTTATV 192 (403)
T ss_pred HCCCCCEEEECCCCCCCHH-HHHHHCC-CEEEEEECCCCCCCCCCHHHHHHCHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf 7799998997788870389-9999849-9689974335777424666520258998762688717999899989988788
Q ss_pred CCEE-----EECCCCCCEEEEEECCHHH---HCC----CCCC---CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHH
Q ss_conf 3203-----5025686148864011011---025----4556---857999700120017665--154456778887654
Q gi|254780153|r 153 PDVG-----FIPESREGLVICDATSAVF---ARH----IDFN---KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLE 215 (391)
Q Consensus 153 ~~~~-----~~~~~~~~llivD~vSs~g---~~p----~d~~---~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~ 215 (391)
+... .+|..++.++|.|-+=+-. +.+ +... ...+...|.-|.++ .|| +|.++..++.++...
T Consensus 193 s~~~l~~i~~la~~~~i~visDEiY~~l~~~g~~~~s~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~ii~~~~li~~~~ 271 (403)
T PRK08636 193 EKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYN-MAGWRVGFVVGNKKLIGALK 271 (403)
T ss_pred CHHHHHHHHHHHHHCCEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCEEEEEECCHHHHHHHH
T ss_conf 99999999999986593899626400000179878741027530013322244200257-76412899973999999999
Q ss_pred HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 11445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r 216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN 295 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~ 295 (391)
..+. + ....++ +..-++...+|+.- +.-++.+.++++++.+.+.+.+...+ +..
T Consensus 272 ~~~~---------~-------------~~~~~~-~~~q~aa~~al~~~--~~~~~~~~~~y~~rr~~l~~~l~~~g-~~~ 325 (403)
T PRK08636 272 KIKS---------W-------------LDYGMF-TPIQVAATIALDGD--QSCVEEIRETYEKRRDVLIKSFENAG-WEL 325 (403)
T ss_pred HHHH---------H-------------CCCCCC-HHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEE
T ss_conf 9998---------6-------------346856-89999999998398--99999999999999999999998659-700
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHH
Q ss_conf 6688200365317898247310113734567888999998-886282872665-567675-0568615888999999999
Q gi|254780153|r 296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLC 372 (391)
Q Consensus 296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~ 372 (391)
.. |+ +..-+-..+++... ..+ ..++... +.+.|+++--|. ....|. -+|++.. .+++.++.-+
T Consensus 326 ~~--P~--g~~y~w~~l~~~~~-~~~-------~~ef~~~ll~~~gV~v~PG~~Fg~~g~~~vRisf~--~~~e~l~ea~ 391 (403)
T PRK08636 326 QK--PR--ASMFVWAKIPEPFR-HLG-------SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAA 391 (403)
T ss_pred CC--CC--CEEEEEEECCCCCC-CCC-------HHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHH
T ss_conf 37--88--10389787875447-899-------89999999974979998875328899987999971--8999999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 373 DWLRWVFYFQKI 384 (391)
Q Consensus 373 ~aLe~~~~~~k~ 384 (391)
+.|+.++++.|+
T Consensus 392 ~Rl~~~l~e~~~ 403 (403)
T PRK08636 392 RNIKKFLKEFEA 403 (403)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998449
No 209
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.04 E-value=3.7e-07 Score=64.90 Aligned_cols=328 Identities=15% Similarity=0.091 Sum_probs=187.8
Q ss_pred CCCCCCCCCC-CCCHHHHHHHHHHHCCCCC-CCC--HHHHHHHHHHHHHHHHHHCCC--CCCEEEEECCCCHHHHHHHHH
Q ss_conf 9888688877-6896899998632103653-289--889999999999999996889--985799974873489998753
Q gi|254780153|r 12 KRPFFSSGPC-AKRPGWSLGILEGALLGRS-HRC--VLGKERINKAIQLTRKVLEVP--ENYRIAIVPASDTGAVEMALW 85 (391)
Q Consensus 12 ~~~~F~pGP~-~~~p~~v~~~~~~~~l~~s-HRs--~~f~~i~~~~~~~l~~l~~~p--~~y~v~~l~GsgT~~~ea~~~ 85 (391)
+-.+|+-|-. --.|..+.+++...+..-. |-+ .-..++-+.+.+.+.+-+++. .+.+| +++.|++.++-.++.
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~ei-ivt~Ga~~al~~a~~ 107 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEI-IVTAGAKEALFLAFL 107 (393)
T ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEE-EECCCHHHHHHHHHH
T ss_conf 6797568899999869999999999865677778876779999999999887539988976628-982667999999999
Q ss_pred HCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CC-CCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--
Q ss_conf 205789707997073688888765323876306740-57-776578676785-----565799742024202203203--
Q gi|254780153|r 86 SLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-AP-YGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-- 156 (391)
Q Consensus 86 nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~-~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-- 156 (391)
.++++||.+++..=+|-.. ...+...++..+.+.. .. .+..++.++++. .+.+.+..=..-||...+...
T Consensus 108 al~~pGDeVlip~P~Y~~y-~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~PnNPTGav~~~~~l~ 186 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSY-EAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELK 186 (393)
T ss_pred HHCCCCCEEEECCCCCCCH-HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHH
T ss_conf 9718998899838998255-999987799798721666655874799999864774645999979999667788999999
Q ss_pred ---EECCCCCCEEEEEECCH-HH--H-CC---CCC---CCCEEEEECCHHCCCCCCC--CEEEEEC-HHHHHHHHHCCCC
Q ss_conf ---50256861488640110-11--0-25---455---6857999700120017665--1544567-7888765411445
Q gi|254780153|r 157 ---FIPESREGLVICDATSA-VF--A-RH---IDF---NKLDVVTFSAQKVLGGEAG--FGIIILS-PASVERLEKYVPS 220 (391)
Q Consensus 157 ---~~~~~~~~llivD~vSs-~g--~-~p---~d~---~~iDv~~a~sQK~l~~ppG--l~~v~~s-~~al~~~~~~~~~ 220 (391)
.++.+++..+|.|-+=+ +. + .+ +.. ...-+.+-|.-|.++ -+| +|.++.. +...+.....
T Consensus 187 ~i~~~a~~~~i~ii~DE~Y~~l~yd~~~~~s~~~~~~~~~~~I~i~s~SK~~~-mtG~RiG~~v~~~~~l~~~~~~l--- 262 (393)
T COG0436 187 AIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYG-MTGWRIGWVVGPPEELIAALRKL--- 262 (393)
T ss_pred HHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCC-CCCCCEEEEEECHHHHHHHHHHH---
T ss_conf 99999998792999963644362689877775442787641899945633578-83612189972769999999999---
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77831232001123210334786446664488999999998620103189999999977999999987479716766882
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~ 300 (391)
+..+...+|+..=++...+|+--...+-++.+.+.++++++.+++.+.+.+++.... .+
T Consensus 263 --------------------~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~-~p 321 (393)
T COG0436 263 --------------------KSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVK-PP 321 (393)
T ss_pred --------------------HHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC-CC
T ss_conf --------------------987236877899999999956766305899999999999999999997558866513-88
Q ss_pred CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCC-EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 00365317898247310113734567888999998886282872665--567675-056861588899999999999999
Q gi|254780153|r 301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 301 ~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
+. ..-+-..++.. .....+. ..+|.+.|+++--|. +...|. .+|++..... ++++..++.|+.
T Consensus 322 ~G--a~y~~~~i~~~-------~d~~~f~---~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~--~~l~~a~~rl~~ 387 (393)
T COG0436 322 EG--AFYLFPKIPEL-------LDSEEFA---KKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSE--ETLEEALRRLAR 387 (393)
T ss_pred CC--CEEEEEECCCC-------CCHHHHH---HHHHHHCCEEEECHHHHCCCCCCCEEEEEEECCH--HHHHHHHHHHHH
T ss_conf 86--45997657998-------9989999---9999867999957257497877987999973689--999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780153|r 378 VFY 380 (391)
Q Consensus 378 ~~~ 380 (391)
...
T Consensus 388 ~~~ 390 (393)
T COG0436 388 FLA 390 (393)
T ss_pred HHH
T ss_conf 986
No 210
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=99.03 E-value=4.9e-07 Score=64.14 Aligned_cols=299 Identities=15% Similarity=0.055 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC-CC
Q ss_conf 99999999999999688998579997487348999875320-57897079970736888887653238763067405-77
Q gi|254780153|r 47 KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA-PY 124 (391)
Q Consensus 47 ~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~-~~ 124 (391)
-+..++-.+.++++++.+. ++ ...|||.|.+.++.-+ +++|+.+++-.-.|..-. .-+...| ..+...+. +.
T Consensus 24 G~~v~~fE~~~~~~~g~k~---~v-~~~sgT~Al~lal~a~~~~~gdeVi~p~~t~~at~-~ai~~~G-~~pvf~Dvd~~ 97 (363)
T pfam01041 24 GPEVREFEKEFAAYLGVKH---AV-AVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA-NAVLYLG-AKPVFVDIDPD 97 (363)
T ss_pred CHHHHHHHHHHHHHHCCCE---EE-EECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH-HHHHHCC-CEEEEEECCCC
T ss_conf 9899999999999978495---99-97588999999999859889299997997759889-9999869-97998506456
Q ss_pred CCCCCHHHCC-----CCCCEEEEEEECCCCEEECC--EEEECCCCCCEEEEEECCHHHHCCCC-----CCCCEEEEECCH
Q ss_conf 7657867678-----55657997420242022032--03502568614886401101102545-----568579997001
Q gi|254780153|r 125 GSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPD--VGFIPESREGLVICDATSAVFARHID-----FNKLDVVTFSAQ 192 (391)
Q Consensus 125 g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~--~~~~~~~~~~llivD~vSs~g~~p~d-----~~~iDv~~a~sQ 192 (391)
....++++++ ..+++..||. -|...+. ...+|+.++..+|-||..++|+.-=. +..+.+.-+.+.
T Consensus 98 t~~id~~~l~~~i~~~tkaIi~vh~---~G~~~d~~~i~~~~~~~~i~lIEDaA~a~Ga~~~gk~~G~~gd~~~fSF~~~ 174 (363)
T pfam01041 98 TYNIDPAAIEAAITPRTKAIMPVHL---YGQPADMDAIRAIAAEHGLPVIEDAAHAHGATYKGKRVGTFGDAATFSFFPT 174 (363)
T ss_pred CCCCCHHHHHHHCCCCCCEEEEECC---CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCCCEEECCCC
T ss_conf 5685899999860758709998789---8986899999999998499999731320267658654356445210205787
Q ss_pred HCCCCCCCCEEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 2001766515445677-888765411445778312320011232103347864466644889999999986201031899
Q gi|254780153|r 193 KVLGGEAGFGIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSA 271 (391)
Q Consensus 193 K~l~~ppGl~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~ 271 (391)
|.|..--| |+++.+. +..+++......+...... .+++....-|.-..-..+.+.. ...+|+. ++.
T Consensus 175 K~ittGeG-G~i~tnd~~l~~~~r~lr~~G~~~~~~-----~~~~~~~~~G~N~rmseiqAai-gl~qL~~------l~~ 241 (363)
T pfam01041 175 KNITTGEG-GAVVTDDPELAERARCLRNHGCGRPAN-----KRYRHEVPLGYNYRMTELQAAI-GLAQLER------LDE 241 (363)
T ss_pred CCCCCCCC-EEEEECCHHHHHHHHHHHHCCCCCCCC-----CCEEEEECCCCCCCCCHHHHHH-HHHHHHH------HHH
T ss_conf 65446897-099969999999999999659688987-----7522450677556767889999-9999999------999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--
Q ss_conf 99999977999999987479716766882003--65317898247310113734567888999998886282872665--
Q gi|254780153|r 272 CVERCNANAAVLFQFIQENDWIENLAVDETTR--SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-- 347 (391)
Q Consensus 272 ~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r--S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-- 347 (391)
+.++.++.++.+.+.+...+.+......+... +.-..++.+++... .....+...|.++|+......
T Consensus 242 ~~~~R~~i~~~Y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~---------~~R~~l~~~L~~~gI~t~~~y~~ 312 (363)
T pfam01041 242 FIARRREIAERYQELLAELPGFEPLTLPTEEDDHAWHLFPVLVPEEAA---------GSRDELVEALKEAGIGTRVHYPI 312 (363)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCCH---------HHHHHHHHHHHHCCCCEEEECCC
T ss_conf 999999999999998578999410686888875147999999764342---------33999999999879955865897
Q ss_pred --CC-------------CC-------CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf --56-------------76-------7505686158889999999999999
Q gi|254780153|r 348 --YR-------------DA-------PLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 348 --~r-------------~~-------~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
|+ .. .+++.+-++..++.+|++..++.|.
T Consensus 313 pl~~~~~~~~~~~~~~~~~pna~~l~~~~l~LP~~~~Lt~~di~~I~~~IK 363 (363)
T pfam01041 313 PLHLQPYYEDRVYYAPGDLPNAERLASRVLSLPLYPGLTDEEVDRVAEAVR 363 (363)
T ss_pred CHHHCHHHHHCCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 134297877456888889989999985989897999889999999998639
No 211
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.03 E-value=1.8e-06 Score=60.49 Aligned_cols=278 Identities=15% Similarity=0.159 Sum_probs=160.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHCCCCCEEE
Q ss_conf 289889999999999999996889985799974873489998753205789-7079970736888887653238763067
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGWMSDIRQLSLQDVRE 119 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~ 119 (391)
||=|+-. ..+.++.|.+.++++.+ .|++ ..|++..++.++..++++| +.+++..-.|+.. ..+++..+..+..
T Consensus 52 nrYPD~~--~~~Lr~alA~~~gv~~e-~I~v-GnGSdElI~~l~raf~~pg~d~vl~~~PtF~~Y--~~~a~~~g~~~~~ 125 (355)
T PRK01688 52 NRYPECQ--PKAVIENYAQYAGVKPE-QVLV-SRGADEGIELLIRAFCEPGKDAILYCPPTYGMY--SVSAETIGVECRT 125 (355)
T ss_pred CCCCCCC--HHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHCCCEEEE
T ss_conf 2497998--89999999998685877-8998-168999999999998558997499778876899--9999867957999
Q ss_pred EECCCCCCCCHHH----CCCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECC-HHHHCC--CC-CCCC-EE
Q ss_conf 4057776578676----7855657997420242022032035---025-686148864011-011025--45-5685-79
Q gi|254780153|r 120 FTAPYGSLPDFSK----VDFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATS-AVFARH--ID-FNKL-DV 186 (391)
Q Consensus 120 ~~~~~g~~~~~~~----~~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vS-s~g~~p--~d-~~~i-Dv 186 (391)
+........+++. ++..+.+.+|.=..-||...+..++ +.. ..+.++|+|=.= .|.... ++ ..+. .+
T Consensus 126 vpl~~~f~~d~~~~~~~~~~~klvficNPNNPTG~~~~~~~l~~l~~~~~~~~lvVvDEAY~eF~~~~s~~~l~~~~~Nl 205 (355)
T PRK01688 126 VPTLENWQLDLPAISDNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHL 205 (355)
T ss_pred ECCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHCCCCHHHHHHHHCCCEE
T ss_conf 52765768699999975158888998689998776468999999997588886688554164347640045676407728
Q ss_pred -EEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf -997001200176651--54456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r 187 -VTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL 263 (391)
Q Consensus 187 -~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i 263 (391)
+.=+--|.+| -||+ |.++.+++.++...+...++ .-+.....+...+|.
T Consensus 206 iVlRTfSK~~g-LAGlRlGy~ia~~~ii~~l~k~~~p~-------------------------~vn~~~~~~a~~al~-- 257 (355)
T PRK01688 206 VILRTLSKAFA-LAGLRCGFTLANEEVINLLLKVIAPY-------------------------PLSTPVADIAAQALS-- 257 (355)
T ss_pred EEEEEHHHHHC-CCCCCEEEEECCHHHHHHHHHHHCCC-------------------------CCCHHHHHHHHHHHH--
T ss_conf 99951668752-68731278850999999999850789-------------------------753999999999972--
Q ss_pred HCCCCHHHH---HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 010318999---999997799999998747971676688200365317898-2473101137345678889999988862
Q gi|254780153|r 264 KKMGGLSAC---VERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQKSFCKSMLSFLEKE 339 (391)
Q Consensus 264 ~~~gGl~~~---~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~ 339 (391)
.+ +++.+ .+...+..+.+++.+.+.++++.. +-|.+|-.+. +.+ ...+.+.|.++
T Consensus 258 -~~-~~~~~~~~~~~i~~~R~~l~~~L~~l~~~~~v-----~pS~aNFil~~~~~--------------~~~~~~~L~~~ 316 (355)
T PRK01688 258 -PQ-GIAAMRERVAQINANRQWLIAALKEIPCVEQV-----FDSETNYILARFTA--------------SSAVFKSLWDQ 316 (355)
T ss_pred -CC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE-----CCCCCCEEEEECCC--------------HHHHHHHHHHC
T ss_conf -04-59999999999999999999999858998616-----89988789997799--------------99999999979
Q ss_pred CEEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 828726-6556767505686158889999999999999
Q gi|254780153|r 340 EIAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 340 g~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
|+++.- ..+......+||+.+ +.++.++|+++|.
T Consensus 317 GIlVR~~~~~~gl~~~lRItig---t~een~~ll~aLk 351 (355)
T PRK01688 317 GIILRDQNKQPGLSNCLRITIG---TREECQRVIDALR 351 (355)
T ss_pred CEEEEECCCCCCCCCEEEEECC---CHHHHHHHHHHHC
T ss_conf 9099558987899998999769---9999999999973
No 212
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=99.03 E-value=1.4e-07 Score=67.50 Aligned_cols=329 Identities=16% Similarity=0.146 Sum_probs=216.2
Q ss_pred CCCHHHHHHHHHHHCC---------CCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---
Q ss_conf 6896899998632103---------65328-9889999999999999996889985799974873489998753205---
Q gi|254780153|r 22 AKRPGWSLGILEGALL---------GRSHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--- 88 (391)
Q Consensus 22 ~~~p~~v~~~~~~~~l---------~~sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--- 88 (391)
++.+. |.++|..-+. ++||. +-+..+.++.++..+.++.+. |..+++| ++|+|..-..++....
T Consensus 14 P~~~~-v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~-d~~ei~f-tsGate~~nl~i~G~a~fy 90 (404)
T TIGR02006 14 PVDKR-VAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGA-DSREIVF-TSGATESDNLAIKGVAKFY 90 (404)
T ss_pred CHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCCEEEE-ECCCCCCHHHHHHHHHHHH
T ss_conf 64589-9999999887415668864234334530688999999999998458-8740787-2377530247888899997
Q ss_pred CCCCEEEEEECCHHHHH----HHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----CCEEEEEEECCCCEEECCEEE--
Q ss_conf 78970799707368888----8765323876306740577765786767855-----657997420242022032035--
Q gi|254780153|r 89 GYRGVDVLAWESFGLGW----MSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----RDVVFVWNGTTSGVCVPDVGF-- 157 (391)
Q Consensus 89 ~~~~~~~~~~g~~~~r~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~v~~~h~ETstGv~~~~~~~-- 157 (391)
..+..+++.. .--.+. ...+.+. +..++.+.....-..+++.++.+ -.|.+.+...-.|+..++..+
T Consensus 91 ~~k~~h~it~-~~ehk~vl~~~r~le~~-G~~vtyl~~~~~G~~~~~~l~~~~~~~t~lvs~m~vnne~G~~~~~~~i~~ 168 (404)
T TIGR02006 91 KSKGKHIITS-KTEHKAVLDTCRELERE-GFEVTYLEVKEDGLIDLEELKAAIRDDTILVSVMAVNNEIGVIQDIAAIGE 168 (404)
T ss_pred HCCCCEEEEE-EHHHHHHHHHHHHHHHC-CCEEEEEECCCCCCEEHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHH
T ss_conf 4237667864-00367899999988757-816898501456621089999874127057875531144330465889998
Q ss_pred ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 02568614886401101102545568--5799970012001766515445677888765411445778312320011232
Q gi|254780153|r 158 IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 158 ~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
+|..+..++-+|+.+++|-.++|..+ +|.+-.+++|-. ||-|++.++++++-.-|.......
T Consensus 169 ~~r~~~~~fh~d~~q~~Gk~~~~~~~~~~dl~s~s~hk~y-GPkGiGalyv~~~Prvr~~~~~~G--------------- 232 (404)
T TIGR02006 169 LCRERKVLFHVDAAQSVGKIPIDVEELKVDLMSISGHKIY-GPKGIGALYVRRKPRVRLEALIHG--------------- 232 (404)
T ss_pred HHHHCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCC-CCCCCCEEEEECCCCEEEEEECCC---------------
T ss_conf 7630441476400013451134353431012100123102-675521245512773355200048---------------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCEEEEEECC
Q ss_conf 1033478644666448899999999862010318999999997799999998747971-676688200365317898247
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWI-ENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~-~~~~~~~~~rS~~~v~~~~~d 314 (391)
-..++|---.|-|++.|.++.++.+...++ +..-..+.....+.++..++...-. .+-..+.......++.|...+
T Consensus 233 -GG~erG~r~Gtl~~~~ivG~G~~~~~a~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~~~~~~ln~sf~~ve 309 (404)
T TIGR02006 233 -GGHERGMRSGTLPTHQIVGLGEAFRIAKEE--LAKDTARVLKLRDRLLNGIESIEEVYLNGDLEQRVKGNLNVSFNYVE 309 (404)
T ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEC
T ss_conf -874354102443201432101678999999--98889999999999999874456533121144311222101222002
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEE---CCCC-C--CCC-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 31011373456788899999888628287---2665-5--676-------750568615888999999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAY---DIGS-Y--RDA-------PLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~---~~~~-~--r~~-------~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
...... .++++. -..|-+. .+.+ | |.. -.++|++.+-..+.++|+..++.+.....+
T Consensus 310 Gesl~~-------a~~~~a---vssGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt~~e~~~~~~~v~~~~~~ 379 (404)
T TIGR02006 310 GESLIM-------ALKDLA---VSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTTEEEIDYAVKLVKSAVDK 379 (404)
T ss_pred HHHHHH-------HHHHHH---HCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 047888-------888875---3056410013353557887606420122322210011121078999999999999998
Q ss_pred HHH
Q ss_conf 999
Q gi|254780153|r 382 QKI 384 (391)
Q Consensus 382 ~k~ 384 (391)
++.
T Consensus 380 lr~ 382 (404)
T TIGR02006 380 LRE 382 (404)
T ss_pred HHH
T ss_conf 861
No 213
>PRK05939 hypothetical protein; Provisional
Probab=99.03 E-value=9.1e-08 Score=68.76 Aligned_cols=298 Identities=16% Similarity=0.082 Sum_probs=158.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+-+.. -.++.+||-+|+.+++++++++|+.+++....||.- ..+.+.+++ +.++.+
T Consensus 44 ~nPT~~~le~~l---a~LEgg~----~a~~~sSGMaAi~~~l~~ll~~Gd~il~~~~~YG~t~~l~~~l~~~G-I~v~~v 115 (396)
T PRK05939 44 GTPTTAALEAKI---TEMEGGV----GTVCFATGMAAIAAVFLTLLRAGDHLVSSQYLFGNTNSLLGTLQGLG-VEVTMV 115 (396)
T ss_pred CCHHHHHHHHHH---HHHHCCC----EEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC-EEEEEE
T ss_conf 986799999999---9982997----49996579999999999835889889953886922999999865318-699998
Q ss_pred ECCCCCCCCHHHCCC--CCCEEEEEEECCCCEE---ECCEE--EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECC
Q ss_conf 057776578676785--5657997420242022---03203--502568614886401--10110254556857999700
Q gi|254780153|r 121 TAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVC---VPDVG--FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSA 191 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~---~~~~~--~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~s 191 (391)
+.. +.++++. .+...+++.||.+--. .++.. .+++++++++|||-+ +-+...|++ .++|+++-|.
T Consensus 116 d~~-----d~~~~~~ai~~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~Pl~-~GaDivvhS~ 189 (396)
T PRK05939 116 DAT-----DVQQVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLVYVVDNTMTSPWLFRPKS-VGASLVINSL 189 (396)
T ss_pred CCC-----CHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCCHHH-HCCCEEEEEC
T ss_conf 897-----9899998618566189998089998707589999999998399799977763042058556-3898899834
Q ss_pred HHCCCCCCCCEEEEECHH---HHHHHHHCCCCCCCCCHHHCCHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 120017665154456778---88765411445778312320011232103--3478644666448899999999862010
Q gi|254780153|r 192 QKVLGGEAGFGIIILSPA---SVERLEKYVPSWPLPKIFRMVKGGRVMEG--LFCGETINTPSLLCIEDYIDALLWLKKM 266 (391)
Q Consensus 192 QK~l~~ppGl~~v~~s~~---al~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~TP~v~~i~al~~~l~~i~~~ 266 (391)
-|-++|-.-+-.-++... -|.+...............+ ...+.... ..-|. +++-+.-|.+...|
T Consensus 190 TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~r~lG~---~l~p~~a~l~~rGL------ 259 (396)
T PRK05939 190 SKYIAGHGNALGGAVTDTGLFDWSGYPNIFPAYRKGDPQQW-GLTQIRKKGLRDMGA---TLSSEAAHRIAIGA------ 259 (396)
T ss_pred CCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHCCCCHHHH-HHHHHHHHHHHHCCC---CCCHHHHHHHHCCC------
T ss_conf 33025887747699965763203323113245415528776-689999888885278---78989999998266------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--------------CCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 318999999997799999998747971676688200--------------365317898247310113734567888999
Q gi|254780153|r 267 GGLSACVERCNANAAVLFQFIQENDWIENLAVDETT--------------RSNTSICMKIVDSDIASLDINSQKSFCKSM 332 (391)
Q Consensus 267 gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~--------------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 332 (391)
..+.-|.+|+.+++..+-+|+++++.... |..|.- .....++|.+++... . ..+
T Consensus 260 ~TL~lRm~~~~~nA~~lA~~L~~hp~V~~-V~yPgL~s~p~~~~a~~~~~g~gg~~sf~l~~~~~-------~----~~f 327 (396)
T PRK05939 260 ETLALRMDRSCSNALALATFLEGHPAVAR-VYYPGLASHPQHARATELFGAYGGLLSFELADGID-------C----FDF 327 (396)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCE-EECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHH-------H----HHH
T ss_conf 61889999999889999999863999578-98999999944999998664886379999668899-------9----999
Q ss_pred HHHHHHCCEEECCCCCCCC----------------------CCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9988862828726655676----------------------750-56861588899999999999999999
Q gi|254780153|r 333 LSFLEKEEIAYDIGSYRDA----------------------PLG-LRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 333 ~~~l~~~g~~~~~~~~r~~----------------------~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
...|.--..++.+|+.++. ..+ +|++++= ||++.|++-|+.|+.
T Consensus 328 ~~~l~l~~~a~SlGg~eSLi~~p~~t~h~~~~~e~r~~~Gi~~~liRlSvGl----Ed~~DLi~DL~qAL~ 394 (396)
T PRK05939 328 LNRLKLVIKATHLGDTRTLAIPVAHTIYYEMGAERRASMGIADSLIRVSVGI----EDTADLIADFEQALD 394 (396)
T ss_pred HHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHHH
T ss_conf 9808724675265763321158621145238999998669791969999410----999999999999984
No 214
>PRK07323 consensus
Probab=99.03 E-value=1.1e-06 Score=62.00 Aligned_cols=313 Identities=16% Similarity=0.128 Sum_probs=163.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCH-HH-HHHHHHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEE
Q ss_conf 968999986321036532898-89-9999999999999968899-85799974873489998753205--7897079970
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV-LG-KERINKAIQLTRKVLEVPE-NYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAW 98 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~-~f-~~i~~~~~~~l~~l~~~p~-~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~ 98 (391)
+|+ |.+++.+++-...|-+. .| .+...+.-++|.+.+..|. .++|+| ..||+.|.|+++.=.- ..+..++...
T Consensus 76 ~p~-i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~rv~f-~~SGsEAvE~AiklAr~~tgr~~iis~~ 153 (443)
T PRK07323 76 HPH-VVRAVQEQAERFAHVCGTDFYYEPTTSLAERLVGHAPFPGEKWRVFF-GNSGAESVEAAIKLARYHTGRSHIIAFL 153 (443)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE-ECCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 899-99999999975556554655778999999999984789766568998-3774689999999999846998799970
Q ss_pred CCHHHHHHHHHHHCCC------------CCEEEEECCC------CCCCC------HHHCC-------CCCCEEEEEEECC
Q ss_conf 7368888876532387------------6306740577------76578------67678-------5565799742024
Q gi|254780153|r 99 ESFGLGWMSDIRQLSL------------QDVREFTAPY------GSLPD------FSKVD-------FDRDVVFVWNGTT 147 (391)
Q Consensus 99 g~~~~r~~~~~~~~~~------------~~~~~~~~~~------g~~~~------~~~~~-------~~~~v~~~h~ETs 147 (391)
++|-++......-.+. ..+..+..+. +.... ++.++ ....++.+-.|..
T Consensus 154 ~~yHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~iAAvi~EPi 233 (443)
T PRK07323 154 GAFHGRTYGAMSLTGSKTVYRQGFGPLLPGVSHIPYPNPFRPPLGSTPEECGHAVLDHLESLFQTVLPAEEVAAIVVEPI 233 (443)
T ss_pred CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf 78789876424312883000135688899906706876323434687267899999999999985178997899998687
Q ss_pred CC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---CCC--CCC--EEEEECCHHCCCCCCC--CEEEEECHH
Q ss_conf 20---22032------035025686148864011011025---455--685--7999700120017665--154456778
Q gi|254780153|r 148 SG---VCVPD------VGFIPESREGLVICDATSAVFARH---IDF--NKL--DVVTFSAQKVLGGEAG--FGIIILSPA 209 (391)
Q Consensus 148 tG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~d~--~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~ 209 (391)
.| +..|. ...+|+++++++|+|=|.+=.++- +-+ .++ |++ ...|+|++ | ++.++.+++
T Consensus 234 qg~gG~~~pp~~yl~~lr~lc~~~~illI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gKglg~--G~Plsav~~~~~ 309 (443)
T PRK07323 234 QGEGGYIVPPDGFLPRLRAICDRHGILLVVDEVQAGMGRTGRLFAIEHWGVQPDII--TLAKGIAS--GMPLGAILAREE 309 (443)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEE--EECHHHCC--CCCEEEEEECHH
T ss_conf 78889856998999999999998497588674232788666430201469788889--87134328--873189998578
Q ss_pred HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r 210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE 289 (391)
Q Consensus 210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~ 289 (391)
..+ +. ....++|+.--|+ ...+..++|+.++ + +..++.+++.+.+.+.+++
T Consensus 310 i~~----------------~~-------~g~h~~T~~gnpl-~~aaa~a~L~iie-~----~l~~~v~~~g~~l~~~L~~ 360 (443)
T PRK07323 310 LMT----------------WP-------PGSHGTTFGGNPV-AAAAAHATLDLLE-G----GLMENAARMGEFLLAELRQ 360 (443)
T ss_pred HHC----------------CC-------CCCCCCCCCCCHH-HHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHH
T ss_conf 613----------------65-------6776536589748-9999999999998-7----7999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf 79716766882003653178-98247310113734567888999998886282872665567675056861588899999
Q gi|254780153|r 290 NDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL 368 (391)
Q Consensus 290 ~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv 368 (391)
+..-.+.+.+ .|...... +.+.++... .+ ......+...+.++|+++...| +..+|+.--=.++.+++
T Consensus 361 l~~~~p~v~~--vRG~GL~~giel~~~~~~-~~----~~~~~~i~~~~~~~Gll~~~~g----~~~ir~~PPL~is~~ei 429 (443)
T PRK07323 361 LQDRFPFLGD--VRGRGLMIGLDFVDPDGN-PD----GDLRDRAVRLAFEKGLLLLGCG----KAAIRICPPLVLTREEA 429 (443)
T ss_pred HHHHCCCEEE--EECCCEEEEEEEECCCCC-CC----HHHHHHHHHHHHHCCEEEEECC----CCEEEEECCEECCHHHH
T ss_conf 8860997998--731563999999548888-48----8999999999997997998369----99899978910889999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780153|r 369 LLLCDWLRWVFYFQ 382 (391)
Q Consensus 369 ~~L~~aLe~~~~~~ 382 (391)
+.+++.|+.+++++
T Consensus 430 d~~l~~l~~al~el 443 (443)
T PRK07323 430 ATGLDILREVFREL 443 (443)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999849
No 215
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.02 E-value=1.4e-06 Score=61.22 Aligned_cols=212 Identities=13% Similarity=0.038 Sum_probs=123.1
Q ss_pred CCEEEEEEECCCC---EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCC-CCCCC
Q ss_conf 6579974202420---22032------0350256861488640110-110--254--55685799970012001-76651
Q gi|254780153|r 137 RDVVFVWNGTTSG---VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLG-GEAGF 201 (391)
Q Consensus 137 ~~v~~~h~ETstG---v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~-~ppGl 201 (391)
..++.+-.|...| +..+. ...+|+++++++|+|=|.+ +|- ..+ +..++.=.+...-|+|+ |--=+
T Consensus 217 ~~iAaviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEVqtG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl 296 (445)
T PRK09221 217 SNIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDLITFAKGLTNGAIPM 296 (445)
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCE
T ss_conf 76689997775577871418889999999998755848998415317881357612405767998677634356787754
Q ss_pred EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 54456778887654114457783123200112321033478644666448899999999862010318999999997799
Q gi|254780153|r 202 GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAA 281 (391)
Q Consensus 202 ~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~ 281 (391)
+.++.+++..+....-... .. . ...++|+.--| ....+...+|+.+++++ ..+|.+++.+
T Consensus 297 sav~~~~ei~d~~~~~~~~--~~---~----------~~hg~T~~gnp-la~aaa~a~L~~i~~~~----l~~~~~~~g~ 356 (445)
T PRK09221 297 GAVIASDEIYDAFMQGPEY--AI---E----------FFHGYTYSGHP-VACAAGLATLDIYREED----LFERAAELAP 356 (445)
T ss_pred EEEEECHHHHHHHHCCCCC--CC---C----------CCCCCCCCCCH-HHHHHHHHHHHHHHHCC----HHHHHHHHHH
T ss_conf 8999657899976038755--53---2----------33466788898-99999999999998646----9999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECC
Q ss_conf 9999987479716766882003653178-982473101137345678889999988862828726655676750568615
Q gi|254780153|r 282 VLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVG 360 (391)
Q Consensus 282 ~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~ 360 (391)
.+.+.++.+.. .+.+. +.|...... +.+.+. +. ........+...+.++|+++..+ |+.+|+.--
T Consensus 357 ~l~~~L~~L~~-~~~v~--dVRG~Glm~giel~~~-----~~-~~~~~~~~~~~~~~~~Gll~~~~-----g~~lrl~PP 422 (445)
T PRK09221 357 YFEDAVHSLKG-LPHVI--DIRNYGLVAGIELAPR-----PG-APGKRGYEAFMKCFEKGLLVRYT-----GDTIALSPP 422 (445)
T ss_pred HHHHHHHHHHC-CCCEE--EEECCCEEEEEEEECC-----CC-CHHHHHHHHHHHHHHCCEEEEEC-----CCEEEEECC
T ss_conf 99999998626-99759--8750408999998578-----88-55578999999999699289637-----997999899
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8889999999999999999999
Q gi|254780153|r 361 VTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 361 g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
=.++.++|+.+++.|+.++.++
T Consensus 423 L~it~~eid~~~~~l~~al~~v 444 (445)
T PRK09221 423 LIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 3489999999999999999986
No 216
>PRK08363 alanine aminotransferase; Validated
Probab=99.01 E-value=2.8e-06 Score=59.31 Aligned_cols=328 Identities=16% Similarity=0.126 Sum_probs=172.3
Q ss_pred CCCCCC-CCC---CCHHHHHHHHHHHCCCCC-CCCH--HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHH
Q ss_conf 886888-776---896899998632103653-2898--8999999999999999688998-5799974873489998753
Q gi|254780153|r 14 PFFSSG-PCA---KRPGWSLGILEGALLGRS-HRCV--LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALW 85 (391)
Q Consensus 14 ~~F~pG-P~~---~~p~~v~~~~~~~~l~~s-HRs~--~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~ 85 (391)
.+|+-| |+. -+|+.+.+++...+-+-. |-++ =..++-+.+-+.+++-+++.=+ -+|++ +.|++.++..++.
T Consensus 33 i~l~iG~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~pd~I~v-t~G~~~al~~~~~ 111 (398)
T PRK08363 33 IRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV-TNAVTEALQMLFG 111 (398)
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEE-CCCHHHHHHHHHH
T ss_conf 685698999789998999999999999718998899887599999999999998689986688898-5778999999999
Q ss_pred HCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf 20578970799707368888876532387630674-057776578676785-----565799742024202203203---
Q gi|254780153|r 86 SLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 86 nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--- 156 (391)
.|+.+||.+++-+=+|..- ...+...++..+... ....+..+++++++. .+.+.++.=..-||...+...
T Consensus 112 ~l~~pGD~Vlvp~P~Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~i~~~tk~i~l~nP~NPTG~v~s~~~l~~ 190 (398)
T PRK08363 112 ALLDPGDEILIPGPSYPPY-TGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYDKKTLKE 190 (398)
T ss_pred HHCCCCCEEEECCCCCCCH-HHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 9669989899866756743-899998399784368862148968999999753113729998799998888654889999
Q ss_pred --EECCCCCCEEEEEECCHHHH---CCCC---CCC-CE-EEEECCHHCCCCCCC--CEEEE-ECH-HHHHHHHHCCCCCC
Q ss_conf --50256861488640110110---2545---568-57-999700120017665--15445-677-88876541144577
Q gi|254780153|r 157 --FIPESREGLVICDATSAVFA---RHID---FNK-LD-VVTFSAQKVLGGEAG--FGIII-LSP-ASVERLEKYVPSWP 222 (391)
Q Consensus 157 --~~~~~~~~llivD~vSs~g~---~p~d---~~~-iD-v~~a~sQK~l~~ppG--l~~v~-~s~-~al~~~~~~~~~~~ 222 (391)
.+|..++.++|.|-+=+-.. .+.. ..+ .. +++.|.-|.++ -|| +|.++ ..+ ..+.+....
T Consensus 191 i~~la~~~~~~vIsDEiY~~l~~~~~~~s~~~~~~~~~vi~i~s~SK~~~-~~G~RiG~i~~~~p~~~~~~~~~~----- 264 (398)
T PRK08363 191 ILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYF-ATGWRLGYIYFVDPEGKLDEVREA----- 264 (398)
T ss_pred HHHHHHHCCCEEECHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCC-CCCCCEEEEEEECCHHHHHHHHHH-----
T ss_conf 99998755964761334666416998779778286778899825503047-856136999975838999999999-----
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
+..+ .++...+++..-++...+++.-. .-++.+.++.+++.+.+++.+...+++....++-.
T Consensus 265 ------~~~~---------~~~~~~~~~~~Q~a~~~al~~~~--~~~~~~~~~~~~rrd~~~~~L~~~~g~~~~~P~G~- 326 (398)
T PRK08363 265 ------LDKL---------ARIRLCPNTPAQFAAIAGLTGPM--DYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGA- 326 (398)
T ss_pred ------HHHH---------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE-
T ss_conf ------9998---------55064777399999999986687--78999999999999999999971799575588878-
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 365317898247310113734567888999998886282872665-5676750-56861588899999999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
.-+-..+++... .+ ...+ ...++.+.|+++--|. +...+.+ ||++.. .+.+.++.-++-|+..++
T Consensus 327 ---~y~~~~l~~~~~--~~---~~ef---~~~ll~e~gV~v~PG~~Fg~~g~g~vRlsf~--~~~e~l~eal~Rl~~~l~ 393 (398)
T PRK08363 327 ---FYIFPRIEEGPW--KD---DKEF---VLDLLHEAHVLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMR 393 (398)
T ss_pred ---EEEEEECCCCCC--CC---HHHH---HHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHH
T ss_conf ---898378788899--99---9999---9999985999998964328899986999983--899999999999999999
No 217
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase; InterPro: IPR013375 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases . Many archaeal species lack cysteinyl-tRNA synthetase, an essential enzyme that provides Cys-tRNA(Cys) in other organisms. Instead, in a two step pathway, tRNA-Cys is acylated with O-phosphoserine (Sep) to form Sep-tRNA(Cys), which is subsequently converted to Cys-tRNA(Cys) . This pathway is also thought to function as the sole route of cysteine biosynthesis in these organisms. Several other archaeal species use both this pathway and direct tRNA(Cys) aminoacylation to synthesize Cys-tRNA(Cys), but this pathway appears to be the only route for cysteine biosynthesis. Proteins in this entry catalyse the second step in this pathway using pyridoxal phosphate and a sulphur donor to synthesize Cys from Sep while attached to the tRNA..
Probab=99.01 E-value=1.7e-08 Score=73.46 Aligned_cols=308 Identities=12% Similarity=0.067 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 88999999999999999688998579997487348999875320578970799707368888876532387630674057
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAP 123 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~ 123 (391)
|+..+-+++ .|.+|++. | ++=.+-||..+=+|++-.|.++||.+++......... -++++.+.+|..+-..
T Consensus 51 PpI~~F~~d---aLA~FlG~-D---~~R~t~GARe~KfaVMhalC~~GD~vV~D~~AHYtsy--vAAEragl~v~eVPy~ 121 (381)
T TIGR02539 51 PPIKDFLED---ALAEFLGM-D---VVRVTHGAREGKFAVMHALCKEGDVVVLDGLAHYTSY--VAAERAGLNVKEVPYE 121 (381)
T ss_pred CCHHHHHHH---HHHHHHCC-C---EEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHH--HHHHHCCCEEEECCCC
T ss_conf 831000455---42667279-7---4540677502457887640899898998587454458--9997549727881655
Q ss_pred CCC---CCC-------HHHCCC-----CCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--C
Q ss_conf 776---578-------676785-----5657997420242022032035--02568614886401101102545568--5
Q gi|254780153|r 124 YGS---LPD-------FSKVDF-----DRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFNK--L 184 (391)
Q Consensus 124 ~g~---~~~-------~~~~~~-----~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--i 184 (391)
.|. -.+ ++++.. ...+.+||.+.+.|-+.|...+ +|+..+++++.-|.=++|-+|++... .
T Consensus 122 ~g~P~Y~v~~e~Y~~viee~~d~~G~~~~LallThvDG~YGNL~DA~kva~vc~~~gvPlLLNCAY~vGRmPv~~ke~~~ 201 (381)
T TIGR02539 122 TGHPEYKVDPEGYKEVIEEVEDESGKPVALALLTHVDGEYGNLADAKKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIKA 201 (381)
T ss_pred CCCCEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCC
T ss_conf 88860764166788888655202798834899840268867511245687665420786221245052100315777787
Q ss_pred EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCC-CCCCCCCHHHCCHHHHHHCCCCCCCCC-CCCCHHHHHHHHHHHHH
Q ss_conf 7999700120017665154456778887654114-457783123200112321033478644-66644889999999986
Q gi|254780153|r 185 DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYV-PSWPLPKIFRMVKGGRVMEGLFCGETI-NTPSLLCIEDYIDALLW 262 (391)
Q Consensus 185 Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~TP~v~~i~al~~~l~~ 262 (391)
|.+++|.+|.|+.-+=+|++.+|++.-+..-+.. -.+... =..... |..+ .-|-|- .-|=+.++.-+=.+.+.
T Consensus 202 DFiVGSGHKSMAASaP~GvLa~~eE~~~~v~r~SslrGdvs--G~~~~~-KEvE--lLGCT~rGap~~TlmASfP~VveR 276 (381)
T TIGR02539 202 DFIVGSGHKSMAASAPCGVLAMSEEWEDKVLRKSSLRGDVS--GRKFPV-KEVE--LLGCTSRGAPIVTLMASFPHVVER 276 (381)
T ss_pred CEEEECCCCHHHHCCCEEECCCCCCCCCCHHCCCCCCCCCC--CCCCCC-CEEE--ECCCCCCHHHHHHHHHCCCHHHHH
T ss_conf 67780685132212660021454222340110232100336--634474-1277--448632404799997328101122
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
Q ss_conf 20103189999999977999999987479716766882003653178982473101137345678889999988862828
Q gi|254780153|r 263 LKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIA 342 (391)
Q Consensus 263 i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 342 (391)
.. +|..--++++.+-+.|+..+++.-+=..|.. . =.++++.|.+..+...+.++-. =+..-|.++|+
T Consensus 277 V~-------~Wd~Ev~ktRy~v~eLE~igG~~QlG~kPk~--H--DLv~FEtPgf~Eia~~~kr~Gy-FLY~ELKkRgi- 343 (381)
T TIGR02539 277 VK-------RWDEEVKKTRYFVAELEDIGGFKQLGVKPKE--H--DLVKFETPGFHEIAKKHKRRGY-FLYEELKKRGI- 343 (381)
T ss_pred CC-------CHHHHHHHHHHHHHHHHHCCCEEECCCCCCC--C--CCEEECCCCCHHHHCCCCCCCC-CHHHHHHHCCC-
T ss_conf 02-------3156677765788876421788864868882--5--6414448840134144879776-40566531583-
Q ss_pred ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 726655676750568615888999999999999999999
Q gi|254780153|r 343 YDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 343 ~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.||..+.+ +.|-.|+|| ++.|.|+-.++++++-..+
T Consensus 344 ~GI~~G~T--k~~K~SvYG-L~~Eqv~~Vv~sf~eI~e~ 379 (381)
T TIGR02539 344 VGIRSGQT--KEIKLSVYG-LTKEQVEYVVDSFKEIVEE 379 (381)
T ss_pred EECCCCCC--EEEEEEEEC-CCCCHHHHHHHHHHHHHHH
T ss_conf 00178874--277643312-7521144446789999985
No 218
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.01 E-value=3e-07 Score=65.47 Aligned_cols=313 Identities=15% Similarity=0.132 Sum_probs=182.1
Q ss_pred HHHHHHHHCCCC------CCC---CHHHHHHHH-HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 999863210365------328---988999999-9999999996889985799974873489998753205789707997
Q gi|254780153|r 28 SLGILEGALLGR------SHR---CVLGKERIN-KAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 28 v~~~~~~~~l~~------sHR---s~~f~~i~~-~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
|++++...+-+. ++| +.+|.+.++ -+.++.++||+..- +=+-+=||+.|..++.+-|+++||.++..
T Consensus 42 V~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~---anVQPhSGs~AN~av~~All~pGD~imgm 118 (413)
T COG0112 42 VMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY---ANVQPHSGSQANQAVYLALLQPGDTIMGL 118 (413)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHHCCCCCEEEEC
T ss_conf 999974577530115899763567872179999999999999848875---04588875689999999973898857505
Q ss_pred ---ECC-HHHH-HHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECCCCCC
Q ss_conf ---073-6888-88765323876306740-57776578676785-----565799742024202203--20350256861
Q gi|254780153|r 98 ---WES-FGLG-WMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPESREG 164 (391)
Q Consensus 98 ---~g~-~~~r-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~~~~~ 164 (391)
.|+ -+.. ......++ .++..+. .+.....|.+++.. .+.+.++-- +.---..| ..+.++...++
T Consensus 119 ~l~~GGHltHg~~v~~sG~~--~~~v~Y~vd~et~~IDyD~~~k~a~e~kPKlii~G~-SaY~r~id~~~~reIad~VGA 195 (413)
T COG0112 119 DLSHGGHLTHGSPVNFSGKL--FNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGG-SAYSRPIDFKRFREIADEVGA 195 (413)
T ss_pred CCCCCCCCCCCCCCCCCCCE--EEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECC-CCCCCCCCHHHHHHHHHHHCC
T ss_conf 67878765579987766405--776762406334751799999999984997899776-035544678999999987193
Q ss_pred EEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf 48864011011-----0254556857999700120017665154456778887654114457783123200112321033
Q gi|254780153|r 165 LVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239 (391)
Q Consensus 165 llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (391)
.+++|+.--.| ..|=+....|++.++.+|-|-||=|=-++.-+++..+++.... .
T Consensus 196 ~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrGG~Il~~~eel~kkin~aV----F---------------- 255 (413)
T COG0112 196 YLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRGGIILTNDEELAKKINSAV----F---------------- 255 (413)
T ss_pred EEEEHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHC----C----------------
T ss_conf 67721778888874566799987552675775347789984179836299998764000----7----------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 47864466644889999999986201031899999999779999999874797167668820036531789824731011
Q gi|254780153|r 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS 319 (391)
Q Consensus 240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~ 319 (391)
..+-.-|-.+.|.+...++.+.++- +.+...++..++++.+-+.+.+.+ +.... -..-+.. +.+.+.+....
T Consensus 256 --Pg~qggpl~HviAakaVa~~Eal~p-~fk~Ya~qVv~NAkaLAe~l~~~G-~~vvs--GgTdnHl-~lVDl~~~~~~- 327 (413)
T COG0112 256 --PGLQGGPLMHVIAAKAVAFKEALEP-EFKEYAKQVVKNAKALAEALKERG-FKVVS--GGTDNHL-VLVDLRSKGLT- 327 (413)
T ss_pred --CCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEEC--CCCCCEE-EEEECCCCCCC-
T ss_conf --7667882788899999999997281-389999999999999999999769-86715--8864448-99972467987-
Q ss_pred CCHHHHHHHHHHHHHHHHHCCEEECCCCC------CCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 37345678889999988862828726655------6767505686158----8899999999999999999999
Q gi|254780153|r 320 LDINSQKSFCKSMLSFLEKEEIAYDIGSY------RDAPLGLRVWVGV----TVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------r~~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~~k 383 (391)
-+.....|.+.|+.+.-+.- ...+.|+|||+-- -..++++....+.|..++...+
T Consensus 328 ---------Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 328 ---------GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred ---------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf ---------78999999970976526889999988878766340668886357988999999999999995500
No 219
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.00 E-value=3.4e-07 Score=65.17 Aligned_cols=281 Identities=17% Similarity=0.153 Sum_probs=160.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..+=+.. .. +..+||.+|+.+++++++++|+.+++...-||. ++.+......+.+++..
T Consensus 62 gnPT~~~lE~~l---a~LEg~~---~a-~~~sSGmaAi~~~ll~ll~~Gdhiv~~~~~Yg~T~~l~~~~l~~~Gi~v~~v 134 (384)
T PRK06434 62 GNPTVQAFEEKY---AVLENAE---HA-LSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYI 134 (384)
T ss_pred CCHHHHHHHHHH---HHHHCCC---CE-EEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 886699999999---9984998---09-9976899999999999618999899807982777999998887569727995
Q ss_pred ECCCCCCCCHHHCCC-CCCEEEEEEECCCCEEEC---CEEEECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCHHC
Q ss_conf 057776578676785-565799742024202203---203502568614886401--10110254556857999700120
Q gi|254780153|r 121 TAPYGSLPDFSKVDF-DRDVVFVWNGTTSGVCVP---DVGFIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQKV 194 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~-~~~v~~~h~ETstGv~~~---~~~~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQK~ 194 (391)
+.. +++.++. .....+++.||.+--... +..+....++..+|||-+ +-+...|++. ++|+++-|.-|-
T Consensus 135 d~~-----~~~~~~~~~~~tklv~~Esp~NP~l~v~Di~aia~~A~~~~vvVDNTfatP~~~~Pl~~-GaDivihS~TKY 208 (384)
T PRK06434 135 DTD-----RLNSLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHENDVIVDATFASPYNQNPLDL-GADVVIHSATKY 208 (384)
T ss_pred CCC-----CHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCC-CCCEEEEECCCC
T ss_conf 786-----57889607468649999889998763156799997641598477547652013783103-898799703520
Q ss_pred CCCCCC--CEEEEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 017665--15445677-888765411445778312320011232103347864466644889999999986201031899
Q gi|254780153|r 195 LGGEAG--FGIIILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSA 271 (391)
Q Consensus 195 l~~ppG--l~~v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~ 271 (391)
++|-+. .|+++.++ +.+++..... ...|. +++-+.-|.+...| ..+.-
T Consensus 209 i~GHsDvl~G~v~~~~~~~~~~l~~~~--------------------~~~G~---~~sP~~a~L~lrGL------~TL~l 259 (384)
T PRK06434 209 ISGHSDVVMGVAGTNNKSIFNNLVERR--------------------KTLGS---NPDPIQAYLALRGL------KTLGL 259 (384)
T ss_pred CCCCCCCCCCEEECCCHHHHHHHHHHH--------------------HCCCC---CCCHHHHHHHHCCC------CCHHH
T ss_conf 068888668645058899999999998--------------------61489---89868899998267------63999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
Q ss_conf 999999779999999874797167668820--------036531789824731011373456788899999888628287
Q gi|254780153|r 272 CVERCNANAAVLFQFIQENDWIENLAVDET--------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAY 343 (391)
Q Consensus 272 ~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~--------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 343 (391)
|.+||.+++..+-+|+++++..... ..|. .-....+.|.+.+. + ....+...|.--..++
T Consensus 260 Rm~r~~~nA~~vA~~L~~hp~V~~V-~yPgle~ak~~~~g~gg~~sf~l~~~-------~----~a~~f~~~l~l~~~a~ 327 (384)
T PRK06434 260 RMEKHNKNGMELARFLRDSKKISNV-YYPDTEIGKKVLRGFGGMLSFELRSM-------E----DVHKFIRNLEIPMVAA 327 (384)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEE-CCCCHHHHHHHHCCCCCEEEEEECCH-------H----HHHHHHHHCCCCEEEC
T ss_conf 9999999999999999809993377-48528999998378985589996889-------9----9999998489686603
Q ss_pred CCCCCCCC----------------------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 26655676----------------------7-50568615888999999999999999999
Q gi|254780153|r 344 DIGSYRDA----------------------P-LGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 344 ~~~~~r~~----------------------~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.+|+.++. . .-+|++++ .||++.|++-|+.||.+
T Consensus 328 SlGg~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSVG----lEd~~DLi~Dl~qAL~k 384 (384)
T PRK06434 328 SLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIG----IEDIDDLIKDIENALSK 384 (384)
T ss_pred CCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHCC
T ss_conf 6676660212762235521899999965979296999923----19999999999998675
No 220
>PRK02769 histidine decarboxylase; Provisional
Probab=99.00 E-value=6.5e-07 Score=63.34 Aligned_cols=295 Identities=14% Similarity=0.091 Sum_probs=168.0
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHHCCC--CCCEEE-EEECCHHHH
Q ss_conf 998632103653289889999999999999996889-9857999748734899987532057--897079-970736888
Q gi|254780153|r 29 LGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALWSLLG--YRGVDV-LAWESFGLG 104 (391)
Q Consensus 29 ~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~nl~~--~~~~~~-~~~g~~~~r 104 (391)
+..++.++.+ |.-.-.-.++=.++.+-+.++|++| ++|-=.+ +.|||.+.-.++++--+ ++..++ .....++-.
T Consensus 47 ~NN~Gdp~~~-~~y~~~s~~~E~eVl~~~a~L~~~~~~~~wGyv-TsGGTE~Nl~al~~ARe~~p~~vl~~Se~aHYSi~ 124 (380)
T PRK02769 47 INNCGDPYSK-SNYPLNSFDFERDVMNFFAELFKIPFNESWGYI-TNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVS 124 (380)
T ss_pred CCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE-ECCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHH
T ss_conf 4457898755-877743089999999999998589954587799-06554999999999998679968996673227799
Q ss_pred HHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC----CC----CCEEEEEEECCCCEEECCEEE--ECCCCCC---EEEEEE
Q ss_conf 8876532387630674-05777657867678----55----657997420242022032035--0256861---488640
Q gi|254780153|r 105 WMSDIRQLSLQDVREF-TAPYGSLPDFSKVD----FD----RDVVFVWNGTTSGVCVPDVGF--IPESREG---LVICDA 170 (391)
Q Consensus 105 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~----~~----~~v~~~h~ETstGv~~~~~~~--~~~~~~~---llivD~ 170 (391)
.++++.+.....+ ..+.|+. +.+++. .. ..+..+-..|.+|..=|+.++ ++++++. -+=|||
T Consensus 125 ---Kaa~llgi~~~~V~~~~~G~m-d~~~L~~~i~~~~~~P~iv~at~GTT~~GaiD~i~~i~~i~~~~g~~~~wlHvDa 200 (380)
T PRK02769 125 ---KIARLLRIKSRVITSLPNGEI-DYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADA 200 (380)
T ss_pred ---HHHHHCCCCCEEECCCCCCCC-CHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC
T ss_conf ---999983998707367999949-7999999999679987799996479888671899999999998299842798412
Q ss_pred CCHHHHCCC-------CC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC
Q ss_conf 110110254-------55-6857999700120017665154456778887654114457783123200112321033478
Q gi|254780153|r 171 TSAVFARHI-------DF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG 242 (391)
Q Consensus 171 vSs~g~~p~-------d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (391)
.-+-...|+ |. .++|-+..+.+|-++.|-+-|++..+++-+++... . ..|+.-. + .
T Consensus 201 A~gG~~lpf~~~~~~~~~~~~~dSis~d~HK~~~~p~~~gv~l~r~~~~~~~~~---~---~~Yi~s~---d-------~ 264 (380)
T PRK02769 201 ALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISV---D---VDYIGSR---D-------Q 264 (380)
T ss_pred CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHHHHHCCC---C---CCCCCCC---C-------C
T ss_conf 023324332677545789888897998773457887755999987256541143---6---8703789---8-------2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
Q ss_conf 64466644889999999986201031899999999779999999874797167668820036531789824731011373
Q gi|254780153|r 243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI 322 (391)
Q Consensus 243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~ 322 (391)
..-.|=|-+.+..+-.+|..+= ..|+.++.+++.++++.+++.+.+.+ +..+. +|. |. +|+|..+++.
T Consensus 265 TI~GSR~G~~~~~~W~~l~~lG-~~Gy~~~v~~~~~~A~yl~~~L~~~G-i~~~~-~P~--s~-~Vvf~~p~e~------ 332 (380)
T PRK02769 265 TISGSRNGHTALLLWAAIRSLG-SKGLRQRVQHCLDMAQYAVDRLQANG-IPAWR-NPN--SI-TVVFPCPSER------ 332 (380)
T ss_pred CEECCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEE-CCC--CE-EEEECCCCHH------
T ss_conf 2442576678999999999878-98899999999999999999998729-87470-788--53-7996289988------
Q ss_pred HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 456788899999888628287266556767505686158889999999999999
Q gi|254780153|r 323 NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 323 ~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+. ++..+.. .++..||=+|+.++.+.++.+++-|-
T Consensus 333 -----i~---------~kw~Ls~-----~~~~~HiVvMPhVt~e~iD~fl~DL~ 367 (380)
T PRK02769 333 -----IW---------KKWHLAT-----SGNQAHIITMPHHNKQQIDSLIDELI 367 (380)
T ss_pred -----HH---------HCEEEEC-----CCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf -----85---------0746721-----59826999899999999999999999
No 221
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.00 E-value=2.9e-06 Score=59.25 Aligned_cols=323 Identities=14% Similarity=0.092 Sum_probs=161.5
Q ss_pred CHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEE
Q ss_conf 968999986321036--53289889999999999999996889-9857999748734899987532057-89-7079970
Q gi|254780153|r 24 RPGWSLGILEGALLG--RSHRCVLGKERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAW 98 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~--~sHRs~~f~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~ 98 (391)
+|+ |.+++++++=. ..|...-......+.-+.|.+++... +++...|..-||+.++|+++.=... .+ ..++...
T Consensus 71 ~p~-v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~F~~~SGSEAvE~AlKlAr~~tgR~~iis~~ 149 (454)
T PRK06931 71 HPA-VMQSIQDVLDSGLPLHTLDLTTPLKDAFSEELLSFLPGEKDEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFS 149 (454)
T ss_pred CHH-HHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 599-9999999986288711277686799999999998477656724899738974899999999987606998199980
Q ss_pred CCHHHHHHHHHHHCCC-----------CCEEEEEC------CCCCCCC--HH-----------HCC-CCCCEEEEEEECC
Q ss_conf 7368888876532387-----------63067405------7776578--67-----------678-5565799742024
Q gi|254780153|r 99 ESFGLGWMSDIRQLSL-----------QDVREFTA------PYGSLPD--FS-----------KVD-FDRDVVFVWNGTT 147 (391)
Q Consensus 99 g~~~~r~~~~~~~~~~-----------~~~~~~~~------~~g~~~~--~~-----------~~~-~~~~v~~~h~ETs 147 (391)
++|=++......--+. ..+..... |++...+ .+ +++ ....++.+-.|..
T Consensus 150 ~sYHG~T~gals~tg~~~~~~~~~~l~p~~~~~p~p~~~r~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~AAviiEPi 229 (454)
T PRK06931 150 GGYHGMTHGALSLTGNLSAKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVVKPAAVILEAI 229 (454)
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 68899743353110796522256888999668079752357667762336999999999999999706887259999476
Q ss_pred CC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCC--CEEEEECHH
Q ss_conf 20---22032------035025686148864011011025---4--55685--7999700120017665--154456778
Q gi|254780153|r 148 SG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSPA 209 (391)
Q Consensus 148 tG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~ 209 (391)
.| +..+. .+.+|.++++++|+|=|.+=.++- + +.+++ |++ ..-|+|++ | ++.+..++.
T Consensus 230 qg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRTG~~fa~e~~gv~PDIi--~~gKglgg--G~P~a~~~~~~~ 305 (454)
T PRK06931 230 QGEGGVVPAPVSWLQKIREVTQKHGILLIVDEVQAGFARSGKMFAFEHAGIEPDIV--VMSKAVGG--GLPLAVLGIKKE 305 (454)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCEE--EEHHHHCC--CCCEEEEEEHHH
T ss_conf 68889761888998899987511681899503443778677841210258898960--02153248--885489987555
Q ss_pred HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r 210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE 289 (391)
Q Consensus 210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~ 289 (391)
. + . +. ....++|+.--|+ ...+..++|+.+++++ + ..+.+++.+.+.+.++.
T Consensus 306 ~-~---~------------~~-------~~~h~~T~~Gnpl-a~Aaala~L~~i~~e~-l---~~~~~~~G~~l~~~L~~ 357 (454)
T PRK06931 306 F-D---A------------WQ-------PAGHTGTFRGNQL-AMATGLATLKILRDEN-L---AQNAQERGEWLTAALRE 357 (454)
T ss_pred H-C---C------------CC-------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHH
T ss_conf 5-2---4------------67-------8886645689847-8899999999998624-9---99999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCE-EEEEECCCCCCCC---CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCH
Q ss_conf 797167668820036531-7898247310113---734567888999998886282872665567675056861588899
Q gi|254780153|r 290 NDWIENLAVDETTRSNTS-ICMKIVDSDIASL---DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEK 365 (391)
Q Consensus 290 ~~~~~~~~~~~~~rS~~~-v~~~~~d~~~~~~---~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~ 365 (391)
.-.-.+.+. +.|.... ..+.+.++..... ....+......+...+.++|+++..++. .+..+|+.--=.++.
T Consensus 358 l~~~~p~V~--dVRG~GL~~giElv~~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~--~~nvlr~~PPL~it~ 433 (454)
T PRK06931 358 LSKEYPCIG--NVRGRGLMIGIEIVDERKPADATGSYPADGELAAAIQKACFNNKLLLERGGR--NGNVVRLLCPLNITQ 433 (454)
T ss_pred HHHCCCCEE--EECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCH
T ss_conf 987099888--6313744899998006764322355666689999999999978968954689--999899979901689
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999
Q gi|254780153|r 366 EDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 366 ~dv~~L~~aLe~~~~~~k 383 (391)
++++.++++||.++.+.=
T Consensus 434 ~eid~~l~~l~~al~e~l 451 (454)
T PRK06931 434 AECEEFIKRFKQAVAEAL 451 (454)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999
No 222
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.00 E-value=3.5e-07 Score=65.08 Aligned_cols=313 Identities=15% Similarity=0.128 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---C-CCCC-EEEEE
Q ss_conf 96899998632103653289889-99999999999999688998579997487348999875320---5-7897-07997
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---L-GYRG-VDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~-~~~~-~~~~~ 97 (391)
+|+ |.+++.+++-...+-+..| ...-.+.-+.|..+. |.+...+|+..||+.|+|+++-=. - ..|. ..+..
T Consensus 93 hp~-I~~Ai~~Ql~~~~~~s~~~~~~~~~~lae~L~~~~--P~~~~~vff~nSGSEAvE~AiKlAr~y~~~~Gk~~ii~~ 169 (442)
T TIGR03372 93 NPN-VIAAVENQLAKQPLHSQELLDPLRALLAKTLAALT--PGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAA 169 (442)
T ss_pred CHH-HHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHC--CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 899-99999999723683014445689999999999747--888787986388679999999999997326898189999
Q ss_pred ECCHHHHHHHHHHHCCCCCEE---------EEECCCCCCCCH----HHCC-CCCCEEEEEEECCCC---EEECC------
Q ss_conf 073688888765323876306---------740577765786----7678-556579974202420---22032------
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDF----SKVD-FDRDVVFVWNGTTSG---VCVPD------ 154 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~----~~~~-~~~~v~~~h~ETstG---v~~~~------ 154 (391)
.+.|=++......--+..... ....+++..... ++.. ...+++.+-.|+..| +..|.
T Consensus 170 ~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~iAaviiEPiqg~gG~~~p~~~yl~~ 249 (442)
T TIGR03372 170 SGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPA 249 (442)
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 16778747570302478433578878999825557899999999999887559978999984677777874499999999
Q ss_pred EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 035025686148864011011025---4--5568579997001200176-651544567788876541144577831232
Q gi|254780153|r 155 VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 155 ~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
...+|+++++++|+|=|.+=.++- + +..++-=.+...-|+|++= .-++.++.+++..+.... . +
T Consensus 250 lr~lc~~~gvllI~DEVqtGfGRTG~~fa~e~~gV~PDIvt~gKgLggG~~Pi~av~~~~~i~~~~~~---~-~------ 319 (442)
T TIGR03372 250 VRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD---N-P------ 319 (442)
T ss_pred HHHHHHHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECHHHHHHHHC---C-C------
T ss_conf 99999984970323621227984778337654899997686545415887762689750999877624---8-9------
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCE
Q ss_conf 0011232103347864466644889999999986201031899999999779999999874797167-668820036531
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETTRSNTS 307 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~rS~~~ 307 (391)
...++|+ .-+-....+...+|+.+++++ ..++.+++.+.+.+.++++..-++ .+.+ .|....
T Consensus 320 ----------~~h~sTf-~Gnpla~aaalavL~~i~~~~----l~~~~~~~G~~l~~~L~~L~~~~p~~V~d--VRG~GL 382 (442)
T TIGR03372 320 ----------FLHTTTF-GGNPLACAAALATINELLEKN----LPAQAAIKGDFLLDGFQQLAAEYPDLIIE--ARGKGL 382 (442)
T ss_pred ----------CCCCCCC-CCCHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE--EEECCE
T ss_conf ----------7547888-989999999999999998656----99999999999999999998768781668--564538
Q ss_pred EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.. +.+.++. ....+...+.++|+.+...+. -++.+|+.--=.++.++++.++++|+.++
T Consensus 383 m~giE~~~~~-----------~~~~~~~~~~~~gvl~~~~~~--~~~~iri~PPL~it~eeid~~i~~l~~aL 442 (442)
T TIGR03372 383 LMAIEFRDNE-----------IGYAFAKELFQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEEEEECCCH-----------HHHHHHHHHHHCCCEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9999978816-----------799999999978979985589--98989998895089999999999999869
No 223
>PRK06836 aspartate aminotransferase; Provisional
Probab=98.99 E-value=2.5e-06 Score=59.60 Aligned_cols=326 Identities=16% Similarity=0.089 Sum_probs=169.0
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHHCCCC---CCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHH
Q ss_conf 8886888776-89689999863210365---328---988999999999999999688998-579997487348999875
Q gi|254780153|r 13 RPFFSSGPCA-KRPGWSLGILEGALLGR---SHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMAL 84 (391)
Q Consensus 13 ~~~F~pGP~~-~~p~~v~~~~~~~~l~~---sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~ 84 (391)
=.+|+-|=-. -+|+.|.+++.+.+-+- .|+ +.=..++-+.+-+.+++-++++-+ -+|+ ++.|++.++..++
T Consensus 36 VI~l~iG~Pdf~~P~~i~~a~~~a~~~~~~~~~~Y~~~~G~~eLReaIa~~~~~~~g~~~~pe~Ii-it~Ga~~al~~~~ 114 (396)
T PRK06836 36 VFDFSLGNPDVEPPAAVKEALRELAEEEDPGMHGYMPNAGYPEVREAVAESLNARFGTPLTADHIV-MTCGAAGALNVVL 114 (396)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEE-ECCCHHHHHHHHH
T ss_conf 588689598999779999999999967998888779874769999999999999868899589889-8588799999999
Q ss_pred HHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE--
Q ss_conf 320578970799707368888876532387630674057776578676785-----5657997420242022032035--
Q gi|254780153|r 85 WSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-- 157 (391)
Q Consensus 85 ~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-- 157 (391)
..++.+||.+++..=+|-.. ...+...++..+.+.....+..+++++++. .+.+.++.=..-||...+..+.
T Consensus 115 ~~ll~pGD~Vlvp~P~y~~y-~~~~~~~g~~~v~v~~~~e~~~~d~~~l~~~i~~~tk~iilnsP~NPTG~v~s~e~l~~ 193 (396)
T PRK06836 115 KALLNPGDEVIIFAPYFVEY-KFYVDNHGGKLVVVPPDTEDFQPDLDALEAAITPKTKAVIINSPNNPTGVIYSEETLKA 193 (396)
T ss_pred HHHCCCCCEEEECCCCCHHH-HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 99669999899827865068-99999849979993167656767999999736756629998689898998679999999
Q ss_pred ---ECCC------CCCEEEEEECCHHH---HCCC----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCC
Q ss_conf ---0256------86148864011011---0254----556857999700120017665--1544567788876541144
Q gi|254780153|r 158 ---IPES------REGLVICDATSAVF---ARHI----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVP 219 (391)
Q Consensus 158 ---~~~~------~~~llivD~vSs~g---~~p~----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~ 219 (391)
++.. ++.++|.|-+=+-. +.++ ....--+++.|.-|.++ -|| +|.++.+++..+.......
T Consensus 194 i~~l~~~~~~~~~h~i~vIsDEiY~~l~fd~~~~~s~~~~~d~~i~i~S~SK~~~-m~G~RiG~iv~~~~i~~~~~~~~~ 272 (396)
T PRK06836 194 LGALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYKNSIVVYSFSKSLS-LPGERIGYIAVNPEMEDADDLMAA 272 (396)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHCCCEEEEEECCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH
T ss_conf 9999998657528867998057407531389878995774782999964642204-673116999868899999999999
Q ss_pred CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r 220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299 (391)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~ 299 (391)
..+. +.. -+..+.|.+. =++....+ .+ .. ..+.++++.+.+++.+.+.+ +... .
T Consensus 273 -------~~~~-------~~~-~~~v~a~~~~-q~a~~~~~----~~-~~--~~~~y~~rrd~l~~~L~~~g-~~~~--~ 326 (396)
T PRK06836 273 -------LVFA-------NRI-LGFVNAPSLM-QRVVAKLQ----DA-TV--DISIYKRRRDLLYDALTELG-FEFV--K 326 (396)
T ss_pred -------HHHH-------HHH-HCCCCHHHHH-HHHHHHHC----CC-CH--HHHHHHHHHHHHHHHHHHCC-CEEC--C
T ss_conf -------9987-------655-0556588999-99999974----67-26--69999999999999999849-8631--7
Q ss_pred CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 20036531789824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 300 ~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
|+ + ...+-+..|.. . ...+...|.++|+++--|..=....-+|++. ..+.+.++.-++.|+...
T Consensus 327 P~--G--afyl~~~~p~~------d----~~~f~~~l~e~gV~vvPG~~Fg~~g~vRls~--a~~~e~i~eal~rl~~~~ 390 (396)
T PRK06836 327 PQ--G--AFYLFPKSPIE------D----DVAFVEKAQKYNILLVPGSGFGAPGYFRLAY--CVDTEQIERSLPAFEKLA 390 (396)
T ss_pred CC--E--EEEEEECCCCC------C----HHHHHHHHHHCCEEEEECCCCCCCCCEEEEE--CCCHHHHHHHHHHHHHHH
T ss_conf 88--1--68998618999------9----9999999996999998274359998089997--089999999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 380 YFQK 383 (391)
Q Consensus 380 ~~~k 383 (391)
++.|
T Consensus 391 ~e~k 394 (396)
T PRK06836 391 KEYK 394 (396)
T ss_pred HHHC
T ss_conf 9863
No 224
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=98.99 E-value=3.3e-06 Score=58.84 Aligned_cols=303 Identities=13% Similarity=0.069 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHCCCCCCCCHH---HHHHHHHHHHHHHHHHCCCCCCE-EEEECCCCHHHHHHHHHHCCCCCC---EEEEE
Q ss_conf 689999863210365328988---99999999999999968899857-999748734899987532057897---07997
Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVL---GKERINKAIQLTRKVLEVPENYR-IAIVPASDTGAVEMALWSLLGYRG---VDVLA 97 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~---f~~i~~~~~~~l~~l~~~p~~y~-v~~l~GsgT~~~ea~~~nl~~~~~---~~~~~ 97 (391)
|..+++++...+-. .|+=++ ..++-+.+.+.+++-++.+-+-+ -++++.|++.++..+++-++.+++ .+++.
T Consensus 15 P~~i~~al~~a~~~-~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~d~~I~~t~Ga~~al~~~~~~~~~~gd~~~~Vlv~ 93 (350)
T TIGR03537 15 PPIIRNALKNAVPE-VSQYPSAAGTKALRDAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFG 93 (350)
T ss_pred CHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf 79999999996021-58998984749999999999999868998978779987883899999999973888778769994
Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCE
Q ss_conf 073688888765323876306740--57776578676785-----565799742024202203203-----502568614
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGL 165 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~l 165 (391)
+=.|..- ...+. ..+..+..+. ...|...++++++. .+.+.++.-..-||...+..+ .+|..++..
T Consensus 94 ~P~y~~y-~~~~~-~~g~~~~~v~l~~~~g~~~d~e~l~~~~~~~~~~i~l~nP~NPTG~v~s~~~l~~l~~~a~~~~~~ 171 (350)
T TIGR03537 94 TPGYPVY-ERGAL-FAGGEPTPVKLKEEDGFLLRLEKVDKEILKETKIVWINYPHNPTGAVAPRSYLEETIAICQEHNII 171 (350)
T ss_pred CCCCCCH-HHHHH-HCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 6987306-99999-769989997535544887799999974666871999899989836476999999999863236907
Q ss_pred EEEEECCH---HHHCCC-----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 88640110---110254-----556857999700120017665--15445677888765411445778312320011232
Q gi|254780153|r 166 VICDATSA---VFARHI-----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 166 livD~vSs---~g~~p~-----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
+|.|-+=+ ++..+- +.+++ +++.|.-|.++. || +|.++.+++.+++......
T Consensus 172 vi~DE~Y~~l~~~~~~~~~~~~~~~~~-i~~~S~SK~~~~-pGlR~G~~~~~~~li~~~~~~~~---------------- 233 (350)
T TIGR03537 172 LCSDECYTEIYFGEPPHSALEVGMENV-LAFHSLSKRSGM-TGYRSGFVAGDEKLISFLKKLRA---------------- 233 (350)
T ss_pred EEEEHHHHHHHCCCCCCCHHHHCCCCE-EEEECCCCCCCC-CCCEEEEEECCHHHHHHHHHHHH----------------
T ss_conf 984312245534899877556346877-999667545046-77559999789999999999862----------------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391)
.-..++|.. .-.+...++. .+.-+..+.+.++++.+.+.+++...+ +.....+ +..-+-+.+++.
T Consensus 234 ------~~~~~~~~~-~q~a~~~~~~---~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~p~----g~~~~w~~~~~~ 298 (350)
T TIGR03537 234 ------NFGVASPDF-VQAAAKAAWS---DDSHVIERRKIFRRKRDLFLEFFNKKG-LEYLYPD----ATFYLWVKVPNG 298 (350)
T ss_pred ------HCCCCHHHH-HHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC----CEEEEEEECCCC
T ss_conf ------067772899-9999999956---809999999999999999999986489-8882688----225998979999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 10113734567888999998886282872665-5676750-5686158889999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
. + ..++...+.++|+++.-|. +...+.+ |||+.. .+.++++..++-||
T Consensus 299 ~----~-------~~~~~~~ll~~gV~v~pG~~Fg~~~~~~~Rl~~~--~~~e~l~ealrrl~ 348 (350)
T TIGR03537 299 I----S-------SKDYALRLLENGIVVAPGENFGSGEEGYVRVALV--PTLEECEEALRIWE 348 (350)
T ss_pred C----C-------HHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEE--CCHHHHHHHHHHHH
T ss_conf 8----9-------9999999997998997673118999986999972--89999999999986
No 225
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.99 E-value=2.2e-06 Score=59.92 Aligned_cols=320 Identities=16% Similarity=0.101 Sum_probs=176.2
Q ss_pred CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 9689999863210--3653289889999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|. |.+++.+++ +.+-|...-..+..-+.-+.|..++-.+ .+..+|+.-|||-++|+++-=-- ..+..++.-.+
T Consensus 74 hP~-Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~ 151 (447)
T COG0160 74 HPR-VVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDG 151 (447)
T ss_pred CHH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC-CCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 989-999999999973013577666336999999999758865-677699568837789999999999858984899788
Q ss_pred CHHHHHHHHHHHCC----------CCCEEEEECCCCCC---C-C----------HHHCC--------CCCCEEEEEEECC
Q ss_conf 36888887653238----------76306740577765---7-8----------67678--------5565799742024
Q gi|254780153|r 100 SFGLGWMSDIRQLS----------LQDVREFTAPYGSL---P-D----------FSKVD--------FDRDVVFVWNGTT 147 (391)
Q Consensus 100 ~~~~r~~~~~~~~~----------~~~~~~~~~~~g~~---~-~----------~~~~~--------~~~~v~~~h~ETs 147 (391)
.|=++-..-+.--+ .....+...|+-.. + . .+.++ ....++.+-.|+.
T Consensus 152 afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpI 231 (447)
T COG0160 152 AFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPI 231 (447)
T ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 65563266687545766533578899998588168865567555663555689999999998740478775469998421
Q ss_pred CC---EEECC------EEEECCCCCCEEEEEECCHHHHCCCCC-----CCC--EEEEECCHHCCCCCCCCEEEEECHHHH
Q ss_conf 20---22032------035025686148864011011025455-----685--799970012001766515445677888
Q gi|254780153|r 148 SG---VCVPD------VGFIPESREGLVICDATSAVFARHIDF-----NKL--DVVTFSAQKVLGGEAGFGIIILSPASV 211 (391)
Q Consensus 148 tG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p~d~-----~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al 211 (391)
.| +..+. ...+|++++.++|+|=|++=.++-=.| +++ |++ ..-|.|++===++.|+.+++..
T Consensus 232 QgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDiv--t~aK~ig~G~Pl~avv~r~ei~ 309 (447)
T COG0160 232 QGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLAKSLGGGLPLSAVVGRAEIM 309 (447)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCEE--EECCCCCCCCCEEEEECCHHHC
T ss_conf 07899747989999999999998198899956655888662601224209998789--8533345787206774457760
Q ss_pred HHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 76541144577831232001123210334786446664488999999998620103189999999977999999987479
Q gi|254780153|r 212 ERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND 291 (391)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~ 291 (391)
+ ..+ ...+.|+--=|+ ...+...+|+.|+++ + ..+|.++..+.+++.++.+.
T Consensus 310 ~----~~~-------------------g~~~~Tf~GNpv-a~Aaa~AvL~vie~e-~---L~~~a~~~G~~l~~~L~~l~ 361 (447)
T COG0160 310 D----WPP-------------------GGHGGTFGGNPV-ACAAALAVLDVIEEE-N---LLERAAELGEYLRDRLEELQ 361 (447)
T ss_pred C----CCC-------------------CCCCCCCCCCHH-HHHHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHHHHH
T ss_conf 1----477-------------------654777786989-999999999999874-2---99999999999999999998
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 71676688200365317898247310113734567888999998886282872665-56767505686158889999999
Q gi|254780153|r 292 WIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLL 370 (391)
Q Consensus 292 ~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~ 370 (391)
--++.+.|-.-+..+.-+=-+.|.....-+ ......+...+.++|.++...| | +..+||-.-=.++.++++.
T Consensus 362 ~~~~~IgdVRG~Glm~giE~v~d~~t~~p~----~~~~~~i~~~~~~~Glil~~~G~~---~nviRi~PPL~is~e~~d~ 434 (447)
T COG0160 362 EKHPLIGDVRGLGLMIGVELVKDRDTKEPD----AELAAKIVARAFERGLLLLTCGPH---GNVLRILPPLTISDEELDE 434 (447)
T ss_pred HHCCCEECCCCCCEEEEEEEECCCCCCCCC----HHHHHHHHHHHHHCCCEEECCCCC---CCEEEEECCCCCCHHHHHH
T ss_conf 646744212446507899983378778999----999999999999869888545787---8679982895438999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 371 LCDWLRWVFYFQ 382 (391)
Q Consensus 371 L~~aLe~~~~~~ 382 (391)
.++.|+.++...
T Consensus 435 ~l~il~~al~~~ 446 (447)
T COG0160 435 GLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999854
No 226
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=98.99 E-value=5.2e-07 Score=63.98 Aligned_cols=309 Identities=15% Similarity=0.065 Sum_probs=170.7
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHHH
Q ss_conf 999863210365328988999999999999999688998579997487348999875320-5789707997073688888
Q gi|254780153|r 28 SLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGWM 106 (391)
Q Consensus 28 v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~~ 106 (391)
|.+.+....+.. -...++-.+.++++++... ++. ..|||.|+++++..+ +++|+.+++-.-.|..-.
T Consensus 5 v~~~l~s~~~~~-------G~~v~~fE~~~~~~~g~k~---~v~-~~sgt~Al~lal~~l~~~~gdeVi~p~~t~~at~- 72 (352)
T cd00616 5 VEEVLDSGWLTL-------GPKVREFEKAFAEYLGVKY---AVA-VSSGTAALHLALRALGIGPGDEVIVPSFTFVATA- 72 (352)
T ss_pred HHHHHHCCCCCC-------CHHHHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH-
T ss_conf 999983699779-------8769999999999978593---999-7688999999999869788399998997639899-
Q ss_pred HHHHHCCCCCEEEEEC-CCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--EECCCCCCEEEEEECCHHHHCC
Q ss_conf 7653238763067405-7776578676785-----565799742024202203203--5025686148864011011025
Q gi|254780153|r 107 SDIRQLSLQDVREFTA-PYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--FIPESREGLVICDATSAVFARH 178 (391)
Q Consensus 107 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--~~~~~~~~llivD~vSs~g~~p 178 (391)
.-+...+ ..+...+. +..-..++++++. .+.+..||. -|...+..+ .+|+.++..+|-||..++|+.-
T Consensus 73 ~ai~~~G-~~pv~~Di~~~t~~id~~~l~~~i~~~tkaIi~vh~---~G~~~d~~~i~~~~~~~~i~lIeDaA~a~Gs~~ 148 (352)
T cd00616 73 NAILLLG-ATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVHL---YGNPADMDAIMAIAKRHGLPVIEDAAQALGATY 148 (352)
T ss_pred HHHHHCC-CEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC---CCCCCCHHHHHHHHHHCCCEEEEHHHHHCCCCC
T ss_conf 9999859-989984077785775889999762868709999689---898668899999999779899802200216834
Q ss_pred CC-----CCCCEEEEECCHHCCCCCCCCEEEEE-CHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf 45-----56857999700120017665154456-7788876541144577831232001123210334786446664488
Q gi|254780153|r 179 ID-----FNKLDVVTFSAQKVLGGEAGFGIIIL-SPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLC 252 (391)
Q Consensus 179 ~d-----~~~iDv~~a~sQK~l~~ppGl~~v~~-s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~ 252 (391)
=+ +..+.+.-+...|.|..- +=|+++. +++..+++......+.......+ .+ ...|.-.--..+.+
T Consensus 149 ~~~~~G~~gd~~~fSF~~~K~it~g-eGG~i~tn~~~~~~~~~~lr~~G~~~~~~~~-~~------~~~G~N~rmsel~A 220 (352)
T cd00616 149 KGRKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKY-EH------EILGYNYRLSEIQA 220 (352)
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCC-CCEEEEECCHHHHHHHHHHHHCCCCCCCCCC-EE------EECCCCCCHHHHHH
T ss_conf 6712566434253447877567677-7349996999999999999965966998852-46------73683422588899
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999986201031899999999779999999874797167668820036-531789824731011373456788899
Q gi|254780153|r 253 IEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS-NTSICMKIVDSDIASLDINSQKSFCKS 331 (391)
Q Consensus 253 i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS-~~~v~~~~~d~~~~~~~~~~~~~~~~~ 331 (391)
.. ...+|+ -++.+.++.++.++...+.+....++......+...+ .-..++.+++... .....
T Consensus 221 ai-gl~qLk------~ld~~~~~R~~i~~~Y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~l~~~~~---------~~R~~ 284 (352)
T cd00616 221 AI-GLAQLE------KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAG---------ESRDE 284 (352)
T ss_pred HH-HHHHHH------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC---------CCHHH
T ss_conf 99-999999------889999999999999999837899816166699983355799999865021---------05999
Q ss_pred HHHHHHHCCEEECCCC---C-----------CC---------CCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9998886282872665---5-----------67---------67505686158889999999999999
Q gi|254780153|r 332 MLSFLEKEEIAYDIGS---Y-----------RD---------APLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 332 ~~~~l~~~g~~~~~~~---~-----------r~---------~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+.+.|.++|+...... | .. ..+++.+-++..++.+|++..++.|+
T Consensus 285 l~~~L~~~gI~~~~~y~p~~~~~~~~~~~~~~~~~~pna~~i~~~~l~LP~~~~Lt~~di~~I~~~IK 352 (352)
T cd00616 285 LIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHHCCCCEEEECCCHHHCHHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 99999987998580283333384989725998899989999984979898999879999999999749
No 227
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=98.99 E-value=1.8e-06 Score=60.53 Aligned_cols=308 Identities=15% Similarity=0.075 Sum_probs=155.3
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC------CCCC-EEE
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205------7897-079
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL------GYRG-VDV 95 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~------~~~~-~~~ 95 (391)
+|+ |.+++.+++=...|-++.|. +...+.- +++... ..+.-+++..|||.++|+++.=.. .++. .++
T Consensus 54 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~la---~~L~~~-~~~~~v~f~~sGsEAvE~AlKlAr~y~~~~~~gr~~ii 128 (395)
T PRK03715 54 NPG-MVEALAAQAEKLINPSPAFYNEPMAKLA---GLLTQH-SCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEII 128 (395)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHH---HHHHCC-CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 699-9999999997547677320278999999---998415-58887998187588999999999998624689984599
Q ss_pred EEECCHHHHHHHHHHHCCCCCEEE------EECCCCCCCCHHHCCC--CCCEEEEEEECCCC---EEECC------EEEE
Q ss_conf 970736888887653238763067------4057776578676785--56579974202420---22032------0350
Q gi|254780153|r 96 LAWESFGLGWMSDIRQLSLQDVRE------FTAPYGSLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD------VGFI 158 (391)
Q Consensus 96 ~~~g~~~~r~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~------~~~~ 158 (391)
...++|-++...-..--+...... ...+....-+++.++. ...++-+-.|...| +..+. ...+
T Consensus 129 ~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~l 208 (395)
T PRK03715 129 TFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRAL 208 (395)
T ss_pred EECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 97578898740221046864445567898899675554558999973499807999937888779852988999999999
Q ss_pred CCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 25686148864011011025---4--55685--79997001200176651544567788876541144577831232001
Q gi|254780153|r 159 PESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 159 ~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
|+++++++|+|=|.+=.++- + +..++ |++ ...|+|++===++.++.+++. . . +.
T Consensus 209 c~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gKgl~gG~Pl~av~~~~~i-~---~------------~~- 269 (395)
T PRK03715 209 TKQHGLLLIVDEVQTGCGRTGTLFAYELAGIEPDIM--TLGKGIGGGVPLAALLAKAEV-A---V------------FE- 269 (395)
T ss_pred HHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEE--EECCHHHCCCCEEEEEECHHH-C---C------------CC-
T ss_conf 951897356201103888666853000489999989--975244289852899982674-2---4------------77-
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf 123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M 310 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~ 310 (391)
....++|+.-=|+. ..+..++|+.+++++ ...+.+++.+.+.+.++++..-.. +.+ .|...... +
T Consensus 270 ------~g~~g~T~~gnpla-~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~~~~-i~~--vRG~Gl~~~i 335 (395)
T PRK03715 270 ------AGDQGGTYNGNPLM-TAVGYAVISQLVAPG----FLEGVRARGEYLKEKLLELSAERG-LEG--ERGEGLLRAL 335 (395)
T ss_pred ------CCCCCCCCCCCHHH-HHHHHHHHHHHHCCC----HHHHHHHHHHHHHHHHHHHHCCCC-CEE--EEECCEEEEE
T ss_conf ------89888798997189-999999999996268----999999999999999998650399-135--7435589999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.+..+.. .. .......+..+|.++.. . .++.+|+.--=.++.++++.+++.||.++.++
T Consensus 336 el~~~~~--------~~-~~~~~~~~~~~gll~~~-~---~~n~irl~PpL~it~~eid~~~~~l~~aL~~l 394 (395)
T PRK03715 336 LLGKDIG--------PQ-IVEKARDMQPDGLLLNA-P---RPNLLRFMPALNVTTDEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EECCCCC--------HH-HHHHHHHHHHCCEEEEC-C---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9678870--------89-99999999839989922-8---99989997994388999999999999999986
No 228
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.98 E-value=8.5e-07 Score=62.59 Aligned_cols=323 Identities=17% Similarity=0.123 Sum_probs=153.3
Q ss_pred CHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC--CCCEEEEEECC
Q ss_conf 96899998632103-6532898899999999999999968899857999748734899987532057--89707997073
Q gi|254780153|r 24 RPGWSLGILEGALL-GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG--YRGVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l-~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~--~~~~~~~~~g~ 100 (391)
+|+ |.+++.+++= +.++-.+ .+.-.+.-+.|.+++ |.-..| ++..|||.+.|+++.=--. .+..++...|.
T Consensus 70 ~p~-v~~Ai~~q~~~~~~~~~~--~~~~~~lAe~l~~~~--p~~~~v-~f~~sGsEAve~AiklAR~~tgr~~ii~~~g~ 143 (429)
T PRK00062 70 HPA-VVEAVIEAAEKGLSFGAP--TELEVKLAELVIERV--PSVEMV-RMVNSGTEATMSAIRLARGFTGRDKIIKFEGC 143 (429)
T ss_pred CHH-HHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHC--CCCCEE-EEECCHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 799-999999998635766699--789999999998558--987779-87187699999999999761188762111465
Q ss_pred HHHHHHHHHHH-------CCCCC---------EEEEECCCCCCCCHHH-CC-CCCCEEEEEEECCC---CEEECCE----
Q ss_conf 68888876532-------38763---------0674057776578676-78-55657997420242---0220320----
Q gi|254780153|r 101 FGLGWMSDIRQ-------LSLQD---------VREFTAPYGSLPDFSK-VD-FDRDVVFVWNGTTS---GVCVPDV---- 155 (391)
Q Consensus 101 ~~~r~~~~~~~-------~~~~~---------~~~~~~~~g~~~~~~~-~~-~~~~v~~~h~ETst---Gv~~~~~---- 155 (391)
|=++.-..+.. .+..+ ...+..+++....+++ ++ ....++.+-.|... |+..|..
T Consensus 144 YHG~~d~~l~~~gs~~~~~~~p~~~g~p~~~~~~~~~~~~nd~~~~~~~l~~~~~~iAAvivEPi~g~~G~i~p~~~yl~ 223 (429)
T PRK00062 144 YHGHSDSLLVKAGSGVATLGLPDSPGVPADFAKNTLTAPYNDLEAVKAAFEEYGDEIACVIVEPVAGNMGCVPPLPGFLE 223 (429)
T ss_pred CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCHHHHH
T ss_conf 66886205653489754467899889976444752630577788889999856886569997432377861448889999
Q ss_pred --EEECCCCCCEEEEEECCHHHH--CC--CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf --350256861488640110110--25--455685799970012001766515445677888765411445778312320
Q gi|254780153|r 156 --GFIPESREGLVICDATSAVFA--RH--IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 156 --~~~~~~~~~llivD~vSs~g~--~p--~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
+.+|+++++|+|+|=|.+=.- .- .+..++-=.+..--|+|++===++.++.+++..+... +...
T Consensus 224 ~lr~lc~~~giLlI~DEV~tGfRtG~~~a~e~~gv~PDi~t~gK~lggG~Pi~av~~~~eim~~~~---~~g~------- 293 (429)
T PRK00062 224 GLRELTDENGALLIFDEVMTGFRVAYGGAQGYYGVTPDLTTLGKVIGGGLPVGAFGGRREIMEQLA---PLGP------- 293 (429)
T ss_pred HHHHHHCCCCEEEEEECCCCCEECCCCHHHCCCCCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHC---CCCC-------
T ss_conf 999996046647999714257005764354178998968996323479875378867799998637---5898-------
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
...++|++--|+ ...+...+|+.+++++=+++..+.-+...+.+.+..++.+ ++.+-..+..+..
T Consensus 294 ---------~~~~gTf~gnpl-a~AAa~a~L~~l~~~~l~~~~~~~G~~l~~~l~~~~~~~~----~~~~v~G~G~m~~- 358 (429)
T PRK00062 294 ---------VYQAGTLSGNPL-AMAAGLATLRLLDQEGVYETLDALTDRLAEGLKEAAEKAG----IPLVVNRVGSMFG- 358 (429)
T ss_pred ---------CCCCCCCCCCHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC----CCEEEEEECCEEE-
T ss_conf ---------412587888879-9999999999997357999999999999999999998779----9879996574789-
Q ss_pred EEECCCCCCCCC-H-HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 982473101137-3-4567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r 310 MKIVDSDIASLD-I-NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 310 ~~~~d~~~~~~~-~-~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
+.+.+....+.. . ..+......+...+.++|+.+...++. ...++ -.++++||+..++++|.+|++++
T Consensus 359 i~f~~~~~~~~~~~~~~d~~~~~~~~~~m~~~Gv~~~p~~~~----~~~ls--~aht~~did~~l~a~~~al~~l~ 428 (429)
T PRK00062 359 IFFTDEPVTNYEDAKASDTERFARFFHAMLEEGVYLAPSQFE----AGFVS--TAHTDEDIEKTLAAAREAFAALA 428 (429)
T ss_pred EEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC----CCEEE--CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 996489888989986442999999999999788644786424----71103--35899999999999999999984
No 229
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.97 E-value=5.6e-07 Score=63.74 Aligned_cols=312 Identities=15% Similarity=0.104 Sum_probs=177.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---C-CC-CEEEEE
Q ss_conf 9689999863210365328988999-9999999999996889985799974873489998753205---7-89-707997
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---G-YR-GVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---~-~~-~~~~~~ 97 (391)
+|. +.+++..+.=...|-|.-|.. ...+.-+.|-++.. ...+|+| .-|||.++|+++---- . ++ ...+.-
T Consensus 60 hP~-iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~--~~d~vff-~NSGaEA~EaAiKlARk~~~~~~k~~Iia~ 135 (404)
T COG4992 60 HPA-LVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP--FADRVFF-CNSGAEANEAALKLARKYTGDPEKSKIIAF 135 (404)
T ss_pred CHH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC--CCCEEEE-CCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 989-999999999776211313378699999999996286--6668997-578389999999999997088887579997
Q ss_pred ECCHHHHHHHHHHHCCCCCE---------EEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------EEEEC
Q ss_conf 07368888876532387630---------67405777657867678556579974202420---22032------03502
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDV---------REFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------VGFIP 159 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------~~~~~ 159 (391)
.++|-+|-......-++... .....|+|.+..++.. ...+++.+-.|+..| |..+. .+.+|
T Consensus 136 ~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~a-i~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lC 214 (404)
T COG4992 136 ENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAA-IDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELC 214 (404)
T ss_pred CCCCCCCCCEEEECCCCHHHCCCCCCCCCCCEECCCCCHHHHHHH-HCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 477577662336656884222678899999536178998999987-3657589998266688898779989999999999
Q ss_pred CCCCCEEEEEECCHHHHCCC-----CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 56861488640110110254-----5568579997001200176651544567788876541144577831232001123
Q gi|254780153|r 160 ESREGLVICDATSAVFARHI-----DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 160 ~~~~~llivD~vSs~g~~p~-----d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
..+++|+|+|=|++=.++-= ++.++.=.+...-|+|||=-=+|.++.++.+.+
T Consensus 215 d~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG~PigA~la~~~~~~---------------------- 272 (404)
T COG4992 215 DEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGFPIGAMLATEEIAS---------------------- 272 (404)
T ss_pred HHHCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECHHHHH----------------------
T ss_conf 8719299996431388866317898974888777886012458833235577426662----------------------
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEEC
Q ss_conf 210334786446664488999999998620103189999999977999999987479716766882003653178-9824
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIV 313 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~ 313 (391)
.......++|+.-=|. ...+-..+|+.+.+++ ..++.+++.+.+.+.+....--++++ .+.|...... +.+.
T Consensus 273 ~~~~G~HgSTfGGNpL-acAv~~a~l~~l~~e~----ll~~v~~~g~~~~~~L~~l~~~~~~v--~~vRG~GLmiGiel~ 345 (404)
T COG4992 273 AFTPGDHGSTFGGNPL-ACAVALAVLEVLLEEG----LLENVREKGEYLLQRLRELKRRYPLV--KEVRGRGLMIGIELK 345 (404)
T ss_pred CCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCCE--EEEECCEEEEEEEEC
T ss_conf 4788765677786799-9999999999980030----89999999999999999975127721--224215049999944
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 73101137345678889999988862828726655676750568615888999999999999999999999
Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
++. ..+++...+.++|+.+-..+ ++.+|..--=.++.++++..+++|+.++...-.
T Consensus 346 ~~~-----------~a~~~~~~~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~al~~~~~ 401 (404)
T COG4992 346 EPY-----------RARDIVRALREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred CCC-----------CHHHHHHHHHHCCEEEECCC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 764-----------57999999997896996078----884884587528899999999999999996542
No 230
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.97 E-value=3.5e-06 Score=58.73 Aligned_cols=320 Identities=10% Similarity=0.025 Sum_probs=162.7
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 96899998632103653289889--999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|+ +.+++.+++-...|-..-| .+...+.-++|.+++.... .+++| ..|||.|+|+++.=.- ..+..++...+
T Consensus 71 ~p~-i~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~L~~~~P~~~-~~v~f-~~sGSEAvE~AiKlAr~~t~r~~Iis~~~ 147 (457)
T PRK05639 71 HPK-LVKAVKEQVELIQHSMIGYTHSERAIRVAEKLVKISPIKN-SKVIF-GLSGSDAVDMAIKVSKFSTRRPWILAFIG 147 (457)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-CEEEE-ECCHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 699-9999999986444765777488799999999997589887-75998-18658999999999864259886999935
Q ss_pred CHHHHHHH-H-------HHHCCC----CCEEEEEC------CCCCC--CCHHH--------CC--------CCCCEEEEE
Q ss_conf 36888887-6-------532387----63067405------77765--78676--------78--------556579974
Q gi|254780153|r 100 SFGLGWMS-D-------IRQLSL----QDVREFTA------PYGSL--PDFSK--------VD--------FDRDVVFVW 143 (391)
Q Consensus 100 ~~~~r~~~-~-------~~~~~~----~~~~~~~~------~~g~~--~~~~~--------~~--------~~~~v~~~h 143 (391)
+|=++-.. . ..+.+. .++..... +++.. .+.++ ++ ....++.+-
T Consensus 148 ~yHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~~p~p~~~r~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~iAavi 227 (457)
T PRK05639 148 AYHGQTLGATSVASFQVSQKRGYSPLMPNVFWLPYPNPYRNIWGINGYEEPNELINRVLDYLENYVFSHVVPPDEVAALF 227 (457)
T ss_pred CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 77986514000146875445688888998478179863345335676337899999999999999986146889789999
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEEC
Q ss_conf 202420---22032------035025686148864011011025---4--55685--79997001200176651544567
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILS 207 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s 207 (391)
.|...| +..+. .+.+|+++++++|+|=|.+=.++- + +..++ |++ ...|+|++=--++.++.+
T Consensus 228 ~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDii--~~gKgl~~G~plsav~~~ 305 (457)
T PRK05639 228 AEPIQGDAGIVVPPENFFKELKKLLNELGILLVMDEVQTGIGRTGKWFASEWFSVKPDMI--IFGKGVASGMGLSGVIGR 305 (457)
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCEE--EECCHHCCCCCCEEEEEC
T ss_conf 827668879862898998899999976398687310322776256545664379999999--977221079870799984
Q ss_pred HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78887654114457783123200112321033478644666448899999999862010318999999997799999998
Q gi|254780153|r 208 PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI 287 (391)
Q Consensus 208 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i 287 (391)
++..+. ... ...+|+.-=|+ ...+..++|+.++++. ..++.+++.+.+.+.+
T Consensus 306 ~~i~~~----~~g-------------------~~~~T~~gnpl-a~Aaa~a~L~~i~~~~----l~~~a~~~g~~l~~~L 357 (457)
T PRK05639 306 KEIMDI----TSG-------------------SALLTPAANPV-ISAAAEATLEIIEEEN----LLKNALEVGNFIMKRL 357 (457)
T ss_pred HHHHHH----HCC-------------------CCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_conf 887754----057-------------------65557886529-9999999999999655----9999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 74797167668820036531789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r 288 QENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED 367 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d 367 (391)
+++.--.+.+.+-.-+..+. .+.+.+... .. .......+...+.+.|.++...| ..++.+|+.--=.++.++
T Consensus 358 ~~L~~~~~~v~dVRG~GL~~-giel~~~~~-~~----~~~~~~~v~~~~~~~Gll~~~~g--~~~nvirl~PPL~it~~e 429 (457)
T PRK05639 358 EEMKEVFEIIGDVRGKGLMI-GVEIVKENG-RP----DPEMTGKICWRAFELGLILPSYG--MFGNVIRITPPLVLTKEV 429 (457)
T ss_pred HHHHHHCCCEEEECCCCCEE-EEEEECCCC-CC----CHHHHHHHHHHHHHCCCEEECCC--CCCCEEEEECCEECCHHH
T ss_conf 99886389756550378099-999943789-98----99999999999996796881589--999989997893168999
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999
Q gi|254780153|r 368 LLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 368 v~~L~~aLe~~~~~~k~ 384 (391)
++.+++.|+.+++++=+
T Consensus 430 id~~~~il~~al~ea~a 446 (457)
T PRK05639 430 AEKGLEIIERAIKDALA 446 (457)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999973
No 231
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.97 E-value=6.2e-07 Score=63.47 Aligned_cols=322 Identities=14% Similarity=0.066 Sum_probs=158.4
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEECCH
Q ss_conf 968999986321036532898899999999999999968899857999748734899987532057-89-7079970736
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAWESF 101 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~g~~ 101 (391)
+|+ |.+++++++-...+-+.. .+..-+.-+.|.+.+.. +++.|.| ..|||.+.|+++.=--. .| +.++...|+|
T Consensus 71 hp~-V~~Av~~q~~~~~~~~~~-~~~~~~lAe~L~~~~~~-~~~~V~F-~nSGsEA~e~AiklAR~~TgR~~Ii~~~g~Y 146 (433)
T PRK00615 71 HPK-ICDAIQQGASRGTSYGLT-SEQEILFATELFSYLGL-EDHKIRF-VSSGTEATMTAVRLARGITGRSIIIKFLGCY 146 (433)
T ss_pred CHH-HHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHCCC-CCCEEEE-ECCHHHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf 889-999999999646656778-88999999999862798-6365997-1883999999999972264887699996776
Q ss_pred HHHHHHHHH-HCC--CC---C-----------EEEEECCCCCCCCHHHC-C-CCCCEEEEEEECC---CCEEECCE----
Q ss_conf 888887653-238--76---3-----------06740577765786767-8-5565799742024---20220320----
Q gi|254780153|r 102 GLGWMSDIR-QLS--LQ---D-----------VREFTAPYGSLPDFSKV-D-FDRDVVFVWNGTT---SGVCVPDV---- 155 (391)
Q Consensus 102 ~~r~~~~~~-~~~--~~---~-----------~~~~~~~~g~~~~~~~~-~-~~~~v~~~h~ETs---tGv~~~~~---- 155 (391)
-++ ..... ... .. . ......+++....++++ + ....++.+-.|.. .|+..|..
T Consensus 147 HG~-~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~nd~~~~e~~~~~~~~~iAAvi~EPi~~~~G~i~p~~~yL~ 225 (433)
T PRK00615 147 HGH-ADTLLQGISFDETNLDNLTHLVDTDLPHPLTLSLPYNDSQIFHEVMEQLGHRVAGVIFEPICANMGVVLPKPGFIE 225 (433)
T ss_pred CCC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHH
T ss_conf 787-2001231457876667898777788887852167877399999999851543035787550246887689989999
Q ss_pred --EEECCCCCCEEEEEECCHHHHC-C---CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf --3502568614886401101102-5---455685799970012001766515445677888765411445778312320
Q gi|254780153|r 156 --GFIPESREGLVICDATSAVFAR-H---IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 156 --~~~~~~~~~llivD~vSs~g~~-p---~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
+.+|.++++|||+|=|.+=.-. . .+..++.-.+..--|+|++===++.++.+++..+... +..
T Consensus 226 ~lr~lc~~~giLLI~DEV~tGfRtg~~~a~e~~gV~PDi~t~gK~lggG~Pi~Av~g~~~im~~~~---~~g-------- 294 (433)
T PRK00615 226 GIIQTCRRFGSLSIMDEVVTGFRVAFGGAAAIFDVKPDITVYGKILGGGLPAAAVVAHRSIMDHLM---PEG-------- 294 (433)
T ss_pred HHHHHHHHCCEEEEEECCCCCCEECCCHHHHHHCCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHC---CCC--------
T ss_conf 999998765938985134116062540577873998617875455679987056668699998637---789--------
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
....+.|++--|+ .+.+...+|+.+++++-.+++.++-++..+-+.+.+++.+. ...+ ...-|...+.
T Consensus 295 --------~~~~~gTf~gnpl-a~AAa~AtL~~l~~~~~~~~~~~~g~~l~~gl~~~~~~~g~-~~~v--~~~gs~~~~~ 362 (433)
T PRK00615 295 --------TIFQAGTLSGNPL-AMAAGKASIELCREEGFYTQLSNLEQLFLSPIEEMIRSQGF-PVSL--VRYGSMFSFF 362 (433)
T ss_pred --------CCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CEEE--EEECCEEEEE
T ss_conf --------8654688740699-99999999999835789999999999999999999997699-8899--7557679999
Q ss_pred EEECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9824731011373--456788899999888628287266556767505686-158889999999999999999999
Q gi|254780153|r 310 MKIVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 310 ~~~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
|. +....+... ..+....+.+...+.++|+.+. +.++..| +--+.+++||+..+++++.++.+.
T Consensus 363 f~--~~~~~~~~~~~~~d~~~~~~f~~~~l~rGV~~~-------p~~~~~~fis~aHt~edi~~t~~a~~~al~~~ 429 (433)
T PRK00615 363 FR--ENRPTNLDEAQLSDVEKFQTFYQEAFSKGVYLS-------PSPFEASFLSSAHSMENLAYAQNVLIDSLEKI 429 (433)
T ss_pred EC--CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 67--999889999986359999999999997897889-------86322646430249999999999999999999
No 232
>pfam00282 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain.
Probab=98.97 E-value=5.5e-07 Score=63.81 Aligned_cols=283 Identities=13% Similarity=0.047 Sum_probs=158.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCE-----EEEECCCCHHHHHHHHH
Q ss_conf 8688877689689999863210365----32898899999999999999968899857-----99974873489998753
Q gi|254780153|r 15 FFSSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKAIQLTRKVLEVPENYR-----IAIVPASDTGAVEMALW 85 (391)
Q Consensus 15 ~F~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~-----v~~l~GsgT~~~ea~~~ 85 (391)
.|-+|++. +|. ++..+-...++. ..-||-..++=+++.+-|+++++.|+.+. .=.++.|||.+.-.++.
T Consensus 44 g~~~~~~~-~~~-~~~d~la~~~n~n~~~~~~sPa~t~lE~~vi~wl~~l~g~p~~~~~~~~~~G~~tsGgs~anl~al~ 121 (370)
T pfam00282 44 AYFPAGNS-YPS-LLGDMLSDAINCNGFTWESSPACTELENVVMDWLAKMLGLPKEFLGSGQGGGVLQGGSSESNLLALL 121 (370)
T ss_pred EECCCCCC-HHH-HHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCHHHHHHHHHH
T ss_conf 86578888-899-9999999985636666200826899999999999999668644416888864873647899999999
Q ss_pred HCCC-----------CCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC----C-------CCEE
Q ss_conf 2057-----------897079970---7368888876532387630674057776578676785----5-------6579
Q gi|254780153|r 86 SLLG-----------YRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF----D-------RDVV 140 (391)
Q Consensus 86 nl~~-----------~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~-------~~v~ 140 (391)
--.. +....++.. ..++-. .+++.-+..+..+..+.....+.+.++. . -.|.
T Consensus 122 ~AR~~~~~~~~~~g~~~~~~vi~~S~~aH~Sv~---Kaa~~lGlg~~~V~~d~~~~m~~~~L~~~i~~~~~~g~~p~~Vv 198 (370)
T pfam00282 122 AARTKWIRRMKAAGKPLGKLVAYTSDQAHSSIE---KAALIAGVELREIPTDENGKMRGMDLEKAIEEDKENGLIPFFVC 198 (370)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH---HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 999999998764179868749997663279999---99997499836953689888299999999999986799744999
Q ss_pred EEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHH---HCCC-----CCCCCEEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf 97420242022032035--025686148864011011---0254-----5568579997001200176651544567788
Q gi|254780153|r 141 FVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVF---ARHI-----DFNKLDVVTFSAQKVLGGEAGFGIIILSPAS 210 (391)
Q Consensus 141 ~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g---~~p~-----d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a 210 (391)
.+-..|.||..=|+.++ +|++++.-+=||+.-.-. +..+ ..++.|-+....+|.++.|-+.++++++++.
T Consensus 199 ataGTT~tGaiD~l~~i~~i~~~~~lWlHVDaA~GG~~~l~~~~r~~~~gie~aDSi~~d~HK~l~~P~~~s~~l~rd~~ 278 (370)
T pfam00282 199 ATLGTTGSGAFDPLQELGDICNKYDLWLHVDAAYAGSAFICPEFRHWLFGIERADSFSFNPHKWMLVLLDCSALWVRDKG 278 (370)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCHHHHHHHCCCCCCCEEEECCHHCCCCCCCEEEEEEECHH
T ss_conf 86377177134789999999998398088423333478829855777569877857977805501878875899994879
Q ss_pred HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 87654114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r 211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN 290 (391)
Q Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~ 290 (391)
.-+.. ... .+.|+....... ..+....+...|- =+-...+-.+|+.+= ..|+..+.+++-++++.+++.+.+.
T Consensus 279 ~l~~~-~~~---~a~Yl~~~~~~~-~~d~~~~t~~~sR-r~~alk~W~~l~~~G-~~g~~~~i~~~~~lA~~~~~~i~~~ 351 (370)
T pfam00282 279 ALQQA-LQF---NPEYLGHTDSDV-AVDYGDWQIPLSR-RFRILKLWFVLRSYG-VEGLQNQIRRHVELAKYFEALVRKD 351 (370)
T ss_pred HHHHH-HCC---CHHHHCCCCCCC-CCCCCCCCCCCCC-CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98898-656---937748877677-7886777778996-330999999999999-9999999999999999999998509
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 97167668820036531789824
Q gi|254780153|r 291 DWIENLAVDETTRSNTSICMKIV 313 (391)
Q Consensus 291 ~~~~~~~~~~~~rS~~~v~~~~~ 313 (391)
+.|+.+.. + ...+|||+++
T Consensus 352 ~~fEl~~~-p---~l~~V~FR~k 370 (370)
T pfam00282 352 SRFEICAE-R---GLGLVCFRLK 370 (370)
T ss_pred CCEEEECC-C---CCCEEEEEEC
T ss_conf 99799558-8---7517999859
No 233
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=98.96 E-value=2.2e-06 Score=60.01 Aligned_cols=327 Identities=16% Similarity=0.015 Sum_probs=175.1
Q ss_pred HHHHHHHHHHH-CCCCCCC------CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC---CCEE
Q ss_conf 68999986321-0365328------988999999999999999688998579997487348999875320578---9707
Q gi|254780153|r 25 PGWSLGILEGA-LLGRSHR------CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGY---RGVD 94 (391)
Q Consensus 25 p~~v~~~~~~~-~l~~sHR------s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~---~~~~ 94 (391)
|..+.....+. ++ ++|- |.=..+++-+-++.|.+|.+.+-. -+-++-+||.+-|++.+-+... ++++
T Consensus 35 p~~v~~~~~r~ef~-t~ytpyq~E~sQG~Lq~~~e~Qs~i~eLtGmdv~--naSl~d~a~A~aEa~~ma~~~~~~~r~~v 111 (398)
T cd00613 35 PAVIKRNILENEFY-TAYTPYQPEISQGRLQALFELQTMLCELTGMDVA--NASLQDEATAAAEAAGLAAIRAYHKRNKV 111 (398)
T ss_pred HHHHHHHHCHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 88989873867671-4699989688699999999999999998688835--63268767799999999999862689989
Q ss_pred EEEECCHHHHHHHH--HHHCCCCCEEEEECCCCCCCCHHHCC----CCCCEEEEEEECCCCEEECC-E--EEECCCCCCE
Q ss_conf 99707368888876--53238763067405777657867678----55657997420242022032-0--3502568614
Q gi|254780153|r 95 VLAWESFGLGWMSD--IRQLSLQDVREFTAPYGSLPDFSKVD----FDRDVVFVWNGTTSGVCVPD-V--GFIPESREGL 165 (391)
Q Consensus 95 ~~~~g~~~~r~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~v~~~h~ETstGv~~~~-~--~~~~~~~~~l 165 (391)
++............ ..+..+.++..+....+-..++++++ ......++.|=+..|+..+. . ..++|+.+++
T Consensus 112 lv~~~~hp~~~~v~~t~~~~~g~~i~~v~~~~~G~~d~~~l~~~~~~~~a~v~v~~Pn~~G~~e~~~~~i~~~~h~~gal 191 (398)
T cd00613 112 LVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPNTLGVFEDLIKEIADIAHSAGAL 191 (398)
T ss_pred EECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHCCCE
T ss_conf 97787780369999998612586589942666777465888875078859999527999627851999999999875986
Q ss_pred EEEEECC-HHHHCC-CCCCCCEEEEECCHH-----CCCCCCCCEEEEECHHHHHHHHHCCCC------CCCCCHHHCCHH
Q ss_conf 8864011-011025-455685799970012-----001766515445677888765411445------778312320011
Q gi|254780153|r 166 VICDATS-AVFARH-IDFNKLDVVTFSAQK-----VLGGEAGFGIIILSPASVERLEKYVPS------WPLPKIFRMVKG 232 (391)
Q Consensus 166 livD~vS-s~g~~p-~d~~~iDv~~a~sQK-----~l~~ppGl~~v~~s~~al~~~~~~~~~------~~~~~~~~~~~~ 232 (391)
+++|+-- +++... --.++.|++..-.|| +.|| ||++++.++++....+-..... +.....+.+...
T Consensus 192 ~~~~~~~~~l~~l~~Pg~~GaDI~~g~~q~~g~P~~~GG-P~~G~~a~~~~l~r~lPgrivg~t~D~~G~~~~~ltlqtr 270 (398)
T cd00613 192 VYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGG-PGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTR 270 (398)
T ss_pred EEEEECCHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCC
T ss_conf 999744035315557100478779852511466566688-7443266799877358998565047888874215441354
Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHH--HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 2321033478644666448899999--99986201031899999999779999999874797167668820036531789
Q gi|254780153|r 233 GRVMEGLFCGETINTPSLLCIEDYI--DALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391)
Q Consensus 233 ~~~~~~~~~~~~~~TP~v~~i~al~--~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391)
.+. -.+...+-|...-+...++. .-+.++=. .|+..+.+++-.+++.+.+.|++.++..++ .. +--=.|
T Consensus 271 eqh--IrRekatsnict~qal~al~a~~Y~~~lG~-~GL~~va~~~~~~A~Yl~~~L~~~~~~~~~-~~-----~~f~EF 341 (398)
T cd00613 271 EQH--IRREKATSNICTGQALLALMAAMYIVYLGP-EGLKEIAERAHLNANYLAKRLKEVGGVLPF-NG-----PFFHEF 341 (398)
T ss_pred CCC--CCCCCEEECCCHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CC-----CEEEEE
T ss_conf 333--677752881643278999999999998488-638899999999999999999863898268-99-----866699
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC---CCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8247310113734567888999998886282872665---5676750568615888999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS---YRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
.+.-+... .... ..+.++++..|... |.-.+..+=|..==..+.+|||+|+++|
T Consensus 342 vi~~~~~~-------~~~~----~~l~k~~i~~G~~~~~~y~~~~~~lli~~TE~~skediD~l~~aL 398 (398)
T cd00613 342 VLRLPPLY-------GIRA----EDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred EEECCCCC-------CHHH----HHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 99768754-------7689----999973621582866468888997999805899999999999749
No 234
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.96 E-value=6.4e-07 Score=63.37 Aligned_cols=291 Identities=14% Similarity=0.073 Sum_probs=152.6
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECCHHHHHH-HHHHH-------CC--CCCEEE
Q ss_conf 9999999996889985799974873489998753205--789707997073688888-76532-------38--763067
Q gi|254780153|r 52 KAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWESFGLGWM-SDIRQ-------LS--LQDVRE 119 (391)
Q Consensus 52 ~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~~~~r~~-~~~~~-------~~--~~~~~~ 119 (391)
+..+.|.+++....+..++|+ .|||.|+|+++.=.- ..+..++...++|-++.. ..... .+ ......
T Consensus 103 ~lae~L~~~~p~~~~~~~~~~-~SGSEAvE~AiKlAR~~tgr~~iis~~~~YHG~t~~~~~~t~~~~~~~~~~~p~~p~~ 181 (446)
T PRK06058 103 AVAEQLNRLTPGDHEKRSALF-NSGAEAVENAVKIARSYTGKPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEV 181 (446)
T ss_pred HHHHHHHHHCCCCCCCEEEEC-CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
T ss_conf 999999985787666267724-8866899999999997569987999769868898730211278866434678899984
Q ss_pred EECC----CCC-----CCC----------HHHCCC---CCCEEEEEEECCCC---EEECC------EEEECCCCCCEEEE
Q ss_conf 4057----776-----578----------676785---56579974202420---22032------03502568614886
Q gi|254780153|r 120 FTAP----YGS-----LPD----------FSKVDF---DRDVVFVWNGTTSG---VCVPD------VGFIPESREGLVIC 168 (391)
Q Consensus 120 ~~~~----~g~-----~~~----------~~~~~~---~~~v~~~h~ETstG---v~~~~------~~~~~~~~~~lliv 168 (391)
...| +.. ... .+.++. ...++.+-.|...| +..|. .+.+|+++++++|+
T Consensus 182 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~ 261 (446)
T PRK06058 182 YRAPLSYPYRDGLLDKELATDGEEAAARAITVIDKQIGADNLAAVIIEPIQGEGGFIVPAEGFLPALLDWCRENGVVFIA 261 (446)
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
T ss_conf 56688877666333556222389999999999997438997799997277688898679889999999999874925870
Q ss_pred EECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf 4011011025---4--55685--79997001200176651--54456778887654114457783123200112321033
Q gi|254780153|r 169 DATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239 (391)
Q Consensus 169 D~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (391)
|=|.+=.++- + +..++ |++ ..-|+|++ |+ +.++.+++..+.. ...
T Consensus 262 DEV~TGfGRtG~~fa~e~~gv~PDiv--t~gKgl~g--G~Plsav~~~~ei~~~~----------------------~~~ 315 (446)
T PRK06058 262 DEVQTGFARTGAMFACEHEGIVPDLI--TTAKGIAG--GLPLSAVTGRAEIMDAP----------------------HVG 315 (446)
T ss_pred CCCEECCCCCCCCHHHHHCCCCCCEE--EECHHCCC--CCCCCCCCCCHHHHCCC----------------------CCC
T ss_conf 43120677556604565358899854--42210137--88851000469886067----------------------678
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCC
Q ss_conf 4786446664488999999998620103189999999977999999987479716766882003653178-982473101
Q gi|254780153|r 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIA 318 (391)
Q Consensus 240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~ 318 (391)
..++|+.--|+ ...+..++|+.++++. + ..+.+++.+.+.+.+.+.-.-.+.+.+ .|...... +.+.++...
T Consensus 316 ~~g~T~~Gnpl-a~aaala~L~~i~~e~-l---~~~v~~~g~~l~~~L~~l~~~~~~i~d--vRG~GLm~gielv~~~~~ 388 (446)
T PRK06058 316 GLGGTYGGNPV-ACAAALAAIETIESDD-L---VARARQIERLVTDRLGALQAEDDRIGD--VRGRGAMIAIELVKSGTT 388 (446)
T ss_pred CCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHHHHCCCEEE--EEECCEEEEEEEEECCCC
T ss_conf 76778898989-9999999999998656-9---999999989999999999860997887--764546999999308888
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 1373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.........+...+.++|.++...+. .++.+|+.--=.++.++++.+++.||.+++++
T Consensus 389 ----~~~~~~~~~v~~~~~~~Gll~~~~g~--~g~~lrl~PPL~it~~eid~~l~il~~al~ev 446 (446)
T PRK06058 389 ----EPDAELTKALAAAAHAAGVIVLTCGT--YGNVIRLLPPLVISDELLSEGLDVLEAALADL 446 (446)
T ss_pred ----CCCHHHHHHHHHHHHHCCCEEECCCC--CCCEEEEECCEECCHHHHHHHHHHHHHHHHHC
T ss_conf ----95989999999999978988962588--99989997994578999999999999999749
No 235
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.96 E-value=1.8e-06 Score=60.56 Aligned_cols=313 Identities=13% Similarity=0.087 Sum_probs=160.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 968999986321036532898--89999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|+ |.+++.+++=..+|-+. -..+...+.-+.|.+++.-..+++|+| ..||+.|+|+++.-.. ..+..++...+
T Consensus 73 ~p~-i~~Av~~Q~~~l~~~~~~~~~~~~~~elae~L~~~~p~~~~~~v~f-~~sGSEAvE~AiklAr~~tgr~~ii~~~~ 150 (442)
T PRK05769 73 HPK-VVEAIKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFPKKVFF-TNSGTESNEAAIKLARYYTGRKYIIAFLG 150 (442)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 799-9999999986176745677688899999999998578666757998-18677899999999898659986997248
Q ss_pred CHHHHHHHHHH--------HCC-C---CCEEEEECC------CCCCCC-------HHHCC--------CCCCEEEEEEEC
Q ss_conf 36888887653--------238-7---630674057------776578-------67678--------556579974202
Q gi|254780153|r 100 SFGLGWMSDIR--------QLS-L---QDVREFTAP------YGSLPD-------FSKVD--------FDRDVVFVWNGT 146 (391)
Q Consensus 100 ~~~~r~~~~~~--------~~~-~---~~~~~~~~~------~g~~~~-------~~~~~--------~~~~v~~~h~ET 146 (391)
+|=++...... +.. + ..+.....| ++.... ++.++ ....++.+-.|.
T Consensus 151 syHG~t~ga~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~iAavi~EP 230 (442)
T PRK05769 151 AFHGRTYGSMSLTASKPVQRRGFFPLMPGVIHVPYPNPYRNPFGYENPEELGNAVLDFIEDYLFKTLVPPEEVAAIFFEP 230 (442)
T ss_pred CCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf 67788633653207830110477899999278078973456557789899999999999999987358989789999989
Q ss_pred CCC---EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCC--EEEEECCHHCCCCCCC--CEEEEECH
Q ss_conf 420---22032------0350256861488640110-110--254--55685--7999700120017665--15445677
Q gi|254780153|r 147 TSG---VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSP 208 (391)
Q Consensus 147 stG---v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~ 208 (391)
..| +..|. ...+|+++++++|+|=|.+ ||- .-+ +.+++ |++ ...|+|++ | +|.++.++
T Consensus 231 v~g~gG~~~p~~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gK~lgg--G~Plsav~~~~ 306 (442)
T PRK05769 231 IQGEGGYVVPPKNFFKELRKLADKYGILLIVDEVQTGFGRTGKMFAIEHFGVEPDII--TLAKAIAG--GLPLGAVIGRA 306 (442)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCEE--EECCHHCC--CCCEEEEEECH
T ss_conf 777889706898999899999987493587111012777556621310467788889--97401038--87408999806
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
+... . .. ...++|+..-|+. ..+..++|+.++ + + ...+.+++.+.+.+.+.
T Consensus 307 ~i~~----~-~~------------------g~h~~T~~g~pl~-~aaa~a~L~~le-e-~---l~~~v~~~G~~l~~~L~ 357 (442)
T PRK05769 307 ELMF----L-PP------------------GSHANTFGGNPVA-AAAALATLELIE-E-G---LLENAARLGEYLLKRLT 357 (442)
T ss_pred HHHC----C-CC------------------CCCCCCCCCCHHH-HHHHHHHHHHHH-H-H---HHHHHHHHHHHHHHHHH
T ss_conf 7503----7-77------------------8715189986799-999999999998-8-8---99999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 4797167668820036531-789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTS-ICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED 367 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~-v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d 367 (391)
++..-.+.+. +.|.... ..+.+.++.. .........+...+.++|+++...+ +..+|+.--=.+++++
T Consensus 358 ~l~~~~p~v~--~vRG~Gl~~giel~~~~~-----~~~~~~~~~~~~~~~~~Gvl~~~~g----~~~i~~~PpL~it~~e 426 (442)
T PRK05769 358 ELKEEYEFIG--DVRGLGLMIGVELVKDRK-----EPDPKLRDKVLREAFKRGLLLLGAG----KSAIRIIPPLVITEEE 426 (442)
T ss_pred HHHHHCCCEE--EECCCCEEEEEEEECCCC-----CCCHHHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCCCHHH
T ss_conf 9986299867--603434599999815777-----8799999999999996995993179----9979997994699999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780153|r 368 LLLLCDWLRWVFYFQ 382 (391)
Q Consensus 368 v~~L~~aLe~~~~~~ 382 (391)
|+.++++||.++.++
T Consensus 427 id~~~~~l~~al~ev 441 (442)
T PRK05769 427 ADTGLEILEEAIKEV 441 (442)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999986
No 236
>PRK09082 putative aminotransferase; Validated
Probab=98.96 E-value=4.5e-06 Score=58.01 Aligned_cols=322 Identities=15% Similarity=0.052 Sum_probs=173.0
Q ss_pred CCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCCC-C--HHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHH
Q ss_conf 8998886888776-89689999863210365328-9--88999999999999999688998--57999748734899987
Q gi|254780153|r 10 KPKRPFFSSGPCA-KRPGWSLGILEGALLGRSHR-C--VLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMA 83 (391)
Q Consensus 10 ~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~sHR-s--~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~ 83 (391)
+..-++++-|=-. -+|..+++++.+.+-.-.|+ + .=..++-+.+-+.+++.++..-+ .+| +++.|++.++..+
T Consensus 29 ~~~~I~L~~G~Pd~~~P~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaiA~~~~~~~g~~~~p~~eI-~vT~Ga~~al~~~ 107 (386)
T PRK09082 29 EHGAINLSQGFPDFDGPPRLVEALAYAMAAGHNQYPPMTGVAALREAIADKTARLYGRRYDADSEI-TVTAGATEALFAA 107 (386)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE-EECCCHHHHHHHH
T ss_conf 599887279899998789999999999965999898987719999999999999968998988838-9877889999999
Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-
Q ss_conf 5320578970799707368888876532387630674057776578676785-----5657997420242022032035-
Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF- 157 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~- 157 (391)
+.-++++||.+++-+=+|..- ...+...+...+.+.-.+.+..+++++++. .+.+.++.=..-||...+..+.
T Consensus 108 ~~al~~pGD~Vlv~~P~Y~~y-~~~~~~~G~~~v~vpl~~~~~~~d~~~l~~~i~~~tk~iil~sP~NPTG~v~s~~~l~ 186 (386)
T PRK09082 108 ILALVRPGDEVIVFDPSYDSY-APAIELAGGRAVRVALQPPDFRVDWQRFAAAITPRTRLIILNTPHNPSGTVWSAADMD 186 (386)
T ss_pred HHHHCCCCCEEEEECCCCHHH-HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHH
T ss_conf 999759999899926862879-9999984998999267798888799999963675764999799969736013635599
Q ss_pred ----ECCCCCCEEEEEECCHHH---HCCC----CCCC---CEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCC
Q ss_conf ----025686148864011011---0254----5568---579997001200176651--54456778887654114457
Q gi|254780153|r 158 ----IPESREGLVICDATSAVF---ARHI----DFNK---LDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSW 221 (391)
Q Consensus 158 ----~~~~~~~llivD~vSs~g---~~p~----d~~~---iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~ 221 (391)
+|..++.++|.|-+=+-. +.+. ...+ --+++.|.-|.++ .||+ |.++..++.+++..+.+
T Consensus 187 ~l~~la~~~~i~ii~DE~Y~~l~~d~~~~~s~~~~~~~~~~~i~i~S~SK~~~-~~G~RiG~~v~p~~l~~~~~~~~--- 262 (386)
T PRK09082 187 ALAQLIAGTDILVLSDEVYEHIVFDGQGHASVLRHPELRERAFVVSSFGKTYH-VTGWKVGYCVAPAALSAEFRKVH--- 262 (386)
T ss_pred HHHHHHHHCCCEEEECCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEECHHHHHHHHHHH---
T ss_conf 99999998194797112223311389888684448653345444324442457-87510599987899999999999---
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
+ .+..++++..-+++...|..- ..-+..+.+.++++.+.+.+.+...+ +.....+
T Consensus 263 ------------~--------~~~~~~~~~~Q~a~a~~l~~~--~~~~~~~~~~y~~rrd~l~~~L~~~~-~~~~~~~-- 317 (386)
T PRK09082 263 ------------Q--------YNTFTVNTPAQLALADYLRAE--PEHYLELPAFYQAKRDRFRAALANSR-FKLLPCE-- 317 (386)
T ss_pred ------------H--------HCCCCCCHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC--
T ss_conf ------------8--------645787689999999999669--58999999999999999999998679-8884799--
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC--CCC-CCCE-EEEECCCCCCHHHHHHHHHHH
Q ss_conf 0365317898247310113734567888999998-886282872665--567-6750-568615888999999999999
Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS--YRD-APLG-LRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~--~r~-~~~~-~RIg~~g~i~~~dv~~L~~aL 375 (391)
+..-+.+.+.. ....+ ...+... +.++|+++--|. |.. .+.+ +|++.- .+++.++.-++-|
T Consensus 318 --G~~f~~~~~~~--~~~~~-------~~~f~~~l~~e~gV~v~PG~~F~~~~~~~~~iRl~fa--~~~e~l~ea~~RL 383 (386)
T PRK09082 318 --GTYFQLVDYSA--ISDLN-------DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRFCFA--KQEETLDAAAERL 383 (386)
T ss_pred --CEEEEEEECCC--CCCCC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEEEC--CCHHHHHHHHHHH
T ss_conf --25999886034--89989-------9999999998589999827110579999997999968--9999999999998
No 237
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.96 E-value=8.1e-07 Score=62.74 Aligned_cols=276 Identities=19% Similarity=0.197 Sum_probs=157.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688--88876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~ 120 (391)
+.+-.+.+++.. ..|=+... + ++.+||-.|..++ ++++.+|+.+++...-||. ++..+..+.++. ...
T Consensus 52 ~nPT~~~le~~l---a~LE~~~~---a-~~~sSGmaAi~~~-l~~l~~Gd~vv~~~~~Yg~t~~~~~~~~~~~~~--~~~ 121 (364)
T PRK07269 52 KNPTRATLEETL---AAIESADY---A-LATSSGMSAIVLA-FSGFPVGSKVVAVRDLYGGSFRWFNQQEKEGRF--HFT 121 (364)
T ss_pred CCHHHHHHHHHH---HHHHCCCC---E-EECCCHHHHHHHH-HHHHCCCCEEEECCCEECHHHHHHHHHHHCCEE--EEE
T ss_conf 886389999999---99849974---4-5327689999999-998368980897046073799999988743838--999
Q ss_pred ECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEECCHH
Q ss_conf 057776578676785565799742024202203203-----502568614886401--1011025455685799970012
Q gi|254780153|r 121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFSAQK 193 (391)
Q Consensus 121 ~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~sQK 193 (391)
..+... ... -...+...+++.||-+--.+.+.. .+++++++++|||-+ +-+...|++. ++|+++-|.-|
T Consensus 122 ~~~~~~--~~~-~~i~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~~~Pl~~-GaDivihS~TK 197 (364)
T PRK07269 122 YANTEE--ELI-AAIEEDTDIVYIETPTNPLMVEFDIEKVAQLAHAKGAKVIVDNTFYSPIYQRPLED-GADIVLHSATK 197 (364)
T ss_pred ECCCHH--HHH-HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC-CCCEEEEECCC
T ss_conf 689859--999-74487853999988999777624779999988756985999788643202673235-86189983550
Q ss_pred CCCCCCCC--EEEEECHH-HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 00176651--54456778-8876541144577831232001123210334786446664488999999998620103189
Q gi|254780153|r 194 VLGGEAGF--GIIILSPA-SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLS 270 (391)
Q Consensus 194 ~l~~ppGl--~~v~~s~~-al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~ 270 (391)
-++|-..+ |.|+.+++ .+++.... . ...|. ++.-+..|.+...| ..+.
T Consensus 198 Yl~GHsDvl~G~vv~~~~~~~~~l~~~---------------~-----~~~G~---~~sP~~a~l~~RGL------~TL~ 248 (364)
T PRK07269 198 YLSGHNDVLAGVVVTNDLELYDKLFYN---------------L-----NTTGA---VLSPFDSYLLMRGL------KTLS 248 (364)
T ss_pred CCCCCCCCEEEEEECCCHHHHHHHHHH---------------H-----HHCCC---CCCHHHHHHHHCCC------CCHH
T ss_conf 014888740168945988999999999---------------9-----85488---78947778886377------7399
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf 99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD 350 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~ 350 (391)
-|.+||.+++..+-+|+++++.... |..|.. ...+.|.+.+.. ....+...|.--..+..+|+..+
T Consensus 249 lR~~~~~~nA~~lA~~L~~hp~V~~-V~yPGl--gg~~sf~l~~~~-----------~~~~f~~~l~lf~~a~SlGg~eS 314 (364)
T PRK07269 249 LRMERSTANAQEVVAFLKKSPAVKE-VLYTGK--GGMISFKVADET-----------KIPHILNSLKVFTFAESLGGVES 314 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEE-EECCCC--CCEEEEEECCHH-----------HHHHHHHHCCCCEEECCCCCCCC
T ss_conf 9999999999999999975998349-977997--726799968889-----------99999984863435306677561
Q ss_pred CC----------------------C-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 67----------------------5-05686158889999999999999999
Q gi|254780153|r 351 AP----------------------L-GLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 351 ~~----------------------~-~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.- . -+|++++ .||++.|++-|+.|+
T Consensus 315 Li~~p~~~~h~~~~~e~r~~~Gi~~~lvRlSvG----lEd~~DLi~DL~qAL 362 (364)
T PRK07269 315 LITYPTTQTHADIPAEVRHSYGLTDDLLRLSIG----IEDARDLIADLRQAL 362 (364)
T ss_pred EEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHH
T ss_conf 347875345633899999965979295999933----199999999999985
No 238
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.95 E-value=4.7e-06 Score=57.89 Aligned_cols=326 Identities=10% Similarity=0.025 Sum_probs=164.8
Q ss_pred CHHHHHHHHHHHCCCCCCCC------HHHHHHHHHHHHHHHHHHCCC---CCCEEEEECCCCHHHHHHHHHHC------C
Q ss_conf 96899998632103653289------889999999999999996889---98579997487348999875320------5
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRC------VLGKERINKAIQLTRKVLEVP---ENYRIAIVPASDTGAVEMALWSL------L 88 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs------~~f~~i~~~~~~~l~~l~~~p---~~y~v~~l~GsgT~~~ea~~~nl------~ 88 (391)
+|+ |.+++.+++-..+|-+ ++.. +.-+.|.++.--. .+..-+|+..|||.++|+++.=. .
T Consensus 82 ~p~-i~~Ai~~Q~~~l~~~~~~~~~~~~~~----~Lae~L~~~~P~~~~~~~l~~Vff~~SGSEAvE~AiKlA~~y~~~r 156 (472)
T PRK08742 82 EPR-IGAAIAAQAGELEQVMLAGFTHEPAV----QLAERLLAIAPRQPGRAPLSKVFYADNGSAGVEVALKMAFHYFHNR 156 (472)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHH----HHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 899-99999999976666013776771899----9999999857344566776879971866899999999999999953
Q ss_pred C-CCC-EEEEEECCHHHHHHHHHHHCC--------C---CCEEEEECC------CCCCCC------HHHC-----CCCCC
Q ss_conf 7-897-079970736888887653238--------7---630674057------776578------6767-----85565
Q gi|254780153|r 89 G-YRG-VDVLAWESFGLGWMSDIRQLS--------L---QDVREFTAP------YGSLPD------FSKV-----DFDRD 138 (391)
Q Consensus 89 ~-~~~-~~~~~~g~~~~r~~~~~~~~~--------~---~~~~~~~~~------~g~~~~------~~~~-----~~~~~ 138 (391)
+ ++. .++...++|=++-.....--+ . ........| +++... .+.+ +....
T Consensus 157 g~~~r~~ii~~~~~YHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~ 236 (472)
T PRK08742 157 GEHRRTRFIALENGYHGETIGALSVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGE 236 (472)
T ss_pred CCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99877158730587888727656515883225677787888456589975346788877899999899999999857886
Q ss_pred EEEEEEEC----CCCEEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCE
Q ss_conf 79974202----42022032------035025686148864011011025---4--5568579997001200176-6515
Q gi|254780153|r 139 VVFVWNGT----TSGVCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFG 202 (391)
Q Consensus 139 v~~~h~ET----stGv~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~ 202 (391)
++.+-.|. .-|+..|. ...+|.++++|+|+|=|.+=.++- + +..++.=.+...-|+|++= -=+|
T Consensus 237 iAA~IiEPviqg~GG~~~p~~~yl~~lr~lc~~~giLLI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~aKgltgGy~Pls 316 (472)
T PRK08742 237 ICALILEPRVQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLS 316 (472)
T ss_pred EEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCCCCCCEEEECHHHCCCCCCEE
T ss_conf 47999715766538705689999999999988729668840330168713445231246779972012121038877707
Q ss_pred EEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 44567788876541144577831232001123210334786446664488999999998620103189999999977999
Q gi|254780153|r 203 IIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAV 282 (391)
Q Consensus 203 ~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~ 282 (391)
.++.+++..+...... .. . ....++|+.--| ....+..++|+.++++ ++- ++.++..+.
T Consensus 317 av~~~~eI~~~~~~~~--~~--~------------~~~hg~Ty~GnP-lacAaala~L~i~~~e-~l~---~~~~~~g~~ 375 (472)
T PRK08742 317 AVLATQQLYDAFLDDS--RE--R------------AFLHSHSYTGNP-LACAAALATLDIFADD-DVI---ARNQPIAAR 375 (472)
T ss_pred EEEECHHHHHHHCCCC--CC--C------------CCCCCCCCCCCH-HHHHHHHHHHHHHHHC-CHH---HHHHHHHHH
T ss_conf 8987699997651477--66--6------------513578999998-9999999999999865-599---999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCC
Q ss_conf 99998747971676688200365317-89824731011373456788899999888628287266556767505686158
Q gi|254780153|r 283 LFQFIQENDWIENLAVDETTRSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGV 361 (391)
Q Consensus 283 l~~~i~~~~~~~~~~~~~~~rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g 361 (391)
+.+.++.... .+.+.+ .|....+ .+.+..+................+...+.+.|+++. ..|+.+|+.--=
T Consensus 376 l~~~~~~l~~-~p~V~d--VRg~GL~~gvElv~d~~~~~~~~~~~~~~~~~~~~~~~~Gll~r-----~~G~~i~~~PPL 447 (472)
T PRK08742 376 MTQLAAQIGE-HPAVAD--VRQAGMIVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLR-----PLGDVLYWMPPY 447 (472)
T ss_pred HHHHHHHCCC-CCCEEE--ECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE-----ECCCEEEEECCC
T ss_conf 9999996158-997898--42686499999715876578787778999999999997894898-----549999997994
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8899999999999999999999
Q gi|254780153|r 362 TVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 362 ~i~~~dv~~L~~aLe~~~~~~k 383 (391)
.++.++|+.+++.|+.++.++=
T Consensus 448 ~it~~eid~~~~~l~~al~ea~ 469 (472)
T PRK08742 448 CVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 0689999999999999999998
No 239
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=98.95 E-value=3e-06 Score=59.08 Aligned_cols=317 Identities=15% Similarity=0.099 Sum_probs=166.0
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCHHHHH
Q ss_conf 9999863210365328988999999999999999688998579997487348999875320-578970799707368888
Q gi|254780153|r 27 WSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL-LGYRGVDVLAWESFGLGW 105 (391)
Q Consensus 27 ~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl-~~~~~~~~~~~g~~~~r~ 105 (391)
.|.+.+....+. +. + ...++-.+.+.++++.+. ++. ..|||.|.+.++.-+ +++||.+++-+-.|..-
T Consensus 16 ~v~~~l~sg~~~-~~-G----~~v~~fE~~~a~~~g~~~---av~-v~sgT~AL~lal~~l~i~~gdeVivp~~tf~at- 84 (375)
T PRK11706 16 YIQEAMSSGKLS-GD-G----GFTRRCQQWLEQRFGCAK---VLL-TPSCTAALEMAALLLDIQPGDEVIMPSYTFVST- 84 (375)
T ss_pred HHHHHHHCCCCC-CC-C----HHHHHHHHHHHHHHCCCE---EEE-ECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHH-
T ss_conf 999999709876-89-9----799999999999978493---999-678899999999986988939999899664999-
Q ss_pred HHHHHHCCCCCEEEEE-CCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEE--EECCCCCCEEEEEECCHHHHC
Q ss_conf 8765323876306740-5777657867678-----5565799742024202203203--502568614886401101102
Q gi|254780153|r 106 MSDIRQLSLQDVREFT-APYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVG--FIPESREGLVICDATSAVFAR 177 (391)
Q Consensus 106 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~--~~~~~~~~llivD~vSs~g~~ 177 (391)
+.-+...| ......+ .+.+-..+++.++ ..+.+..||. .|...+..+ .+|+.++..+|-||..++|+.
T Consensus 85 ~~ai~~~G-a~pvfvDid~~t~~id~~~ie~~it~ktkaIi~Vh~---~G~~~d~~~I~~iak~~~i~vIEDaA~a~Gs~ 160 (375)
T PRK11706 85 ANAFVLRG-AKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVHY---AGVACEMDTIMALAKKHNLFVVEDAAQGVMST 160 (375)
T ss_pred HHHHHHCC-CEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECC---CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 99999839-969999716875776789999870867549999678---89866789999988537908983440036876
Q ss_pred CCC-----CCCCEEEEECCHHCCCCCCCCEEEEE-CHHHHHHHHHCCCCCCC-CCHHHCCHHHHHHCCCCCCCCCCCCCH
Q ss_conf 545-----56857999700120017665154456-77888765411445778-312320011232103347864466644
Q gi|254780153|r 178 HID-----FNKLDVVTFSAQKVLGGEAGFGIIIL-SPASVERLEKYVPSWPL-PKIFRMVKGGRVMEGLFCGETINTPSL 250 (391)
Q Consensus 178 p~d-----~~~iDv~~a~sQK~l~~ppGl~~v~~-s~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~TP~v 250 (391)
-=. +..+.+.-+.+.|.|.. ..=|+++. +++..+++......+.. ..++.- ...++. ...-|.-+.-..+
T Consensus 161 ~~g~~~Gt~Gd~~~fSF~~~K~itt-GeGG~i~tnd~~l~~~~~~lr~~G~~~~~~~~g-~~~~y~-~~~~G~N~rms~l 237 (375)
T PRK11706 161 YKGRALGTIGHLGCFSFHETKNYTA-GEGGALLINDPALIERAEIIREKGTNRSQFFRG-QVDKYT-WVDIGSSYLPSEL 237 (375)
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCC-CCCEEEEECCHHHHHHHHHHHHHCCCHHHHHCC-CCCCCE-EEECCCCCCCCHH
T ss_conf 6764457679988858988987877-687499979999999999999828761576557-876641-5404764678889
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCCCCCC-EEEEEECCCCCCCCCHHHHH
Q ss_conf 88999999998620103189999999977999999987479---716766882003653-17898247310113734567
Q gi|254780153|r 251 LCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND---WIENLAVDETTRSNT-SICMKIVDSDIASLDINSQK 326 (391)
Q Consensus 251 ~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~---~~~~~~~~~~~rS~~-~v~~~~~d~~~~~~~~~~~~ 326 (391)
.+.. ...+|+. ++.+.++.++.++..++.+.... ........+...++- ...+.+++..
T Consensus 238 qAAi-gl~QL~~------ld~~~~~R~~i~~~Y~~~L~~l~~~~~i~~p~~~~~~~~~~~~~~i~~~~~~---------- 300 (375)
T PRK11706 238 QAAY-LWAQLEA------ADRINQQRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDIE---------- 300 (375)
T ss_pred HHHH-HHHHHHH------HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEEEEEECCHH----------
T ss_conf 9999-9999998------8999999999999999973051012861045579998330057999956777----------
Q ss_pred HHHHHHHHHHHHCCEEECCCC---CC-----C--------------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 888999998886282872665---56-----7--------------67505686158889999999999999999
Q gi|254780153|r 327 SFCKSMLSFLEKEEIAYDIGS---YR-----D--------------APLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 327 ~~~~~~~~~l~~~g~~~~~~~---~r-----~--------------~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
....+.+.|.++|+...... |. . ..+++.+-++..++.+||+..++.|...|
T Consensus 301 -~Rd~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~~p~se~~~~~~lsLP~~~~Lt~~di~~I~~~ik~ff 374 (375)
T PRK11706 301 -DRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTPVEQRTVIATLLNFF 374 (375)
T ss_pred -HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf -89999999998799832447344249988970877799989999984889887899889999999999999984
No 240
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.95 E-value=3.8e-06 Score=58.44 Aligned_cols=268 Identities=18% Similarity=0.135 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
Q ss_conf 99999999996889985799974873489998753205789707997073688888765323876306740577765786
Q gi|254780153|r 51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDF 130 (391)
Q Consensus 51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~ 130 (391)
.+.++.+...++.|+...|+.. +|.+..+... ..++.+++..+ ..-.|++.. .+.+..+..+..... ..
T Consensus 56 ~~l~~~~a~~~g~~~~~~Vl~g-nGs~elI~~l-~~~l~~~~v~i-~~ptfseY~--~a~~~~G~~v~~~~~------~~ 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPV-AGSQAAIRAL-PALLPRGRVGI-AALAYSEYA--PAFARHGHRVVPLDI------AA 124 (339)
T ss_pred HHHHHHHHHHCCCCCHHHEEEC-CCHHHHHHHH-HHHHCCCCEEE-ECCCHHHHH--HHHHHCCCEEEECCC------CH
T ss_conf 8999999998199967709966-5799999999-99828886899-452036778--999982985551373------34
Q ss_pred HHCCCC-CCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECC-HHHHCC-----CCCCCCEEEEECCHHCCCCC
Q ss_conf 767855-657997420242022032035-----025686148864011-011025-----45568579997001200176
Q gi|254780153|r 131 SKVDFD-RDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATS-AVFARH-----IDFNKLDVVTFSAQKVLGGE 198 (391)
Q Consensus 131 ~~~~~~-~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vS-s~g~~p-----~d~~~iDv~~a~sQK~l~~p 198 (391)
+.++.. +.+.+|.=..-||...+.... .+..++.++|||=.= .|...+ .+..++ ++.-+--|.+| -
T Consensus 125 ~~l~~~~~~v~l~nPNNPTG~~~~~~~l~~~~~~~~~~~~~lvvDEAy~df~~~~s~~~~~~~~nl-ivlRS~sK~~g-L 202 (339)
T PRK06959 125 DTLPATLTHAIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTGAHASLAAHTHRPGL-VVLRSVGKFFG-L 202 (339)
T ss_pred HHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCHHHHHHCCCCCE-EEEEECCHHHC-C
T ss_conf 337356898998058071038889999999998554138889997344452665455764169998-99841567645-8
Q ss_pred CC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 65--1544567788876541144577831232001123210334786446664488999999998620103189999999
Q gi|254780153|r 199 AG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERC 276 (391)
Q Consensus 199 pG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~ 276 (391)
|| +|+++.+++.+++......+| +-+.....+...+|. ++.=++...++.
T Consensus 203 aGlRlGy~~a~~~~i~~l~~~~~pw-------------------------~v~~~a~~a~~aal~---d~~~~~~~~~~l 254 (339)
T PRK06959 203 AGVRAGFVLAAPALLAALRDALGAW-------------------------TVSGPARHAVRAAFA---DRAWQAAMRERL 254 (339)
T ss_pred CCCCEEEEECCHHHHHHHHHHCCCC-------------------------CCCHHHHHHHHHHHC---CHHHHHHHHHHH
T ss_conf 7646364437999999999538998-------------------------977999999999963---999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEE
Q ss_conf 97799999998747971676688200365317898247310113734567888999998886282872665567675056
Q gi|254780153|r 277 NANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLR 356 (391)
Q Consensus 277 ~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~R 356 (391)
.+.++.+.+.+...+ +. . .+..+.++ ++.+. .+.+...|.++|+.+..-+ .+.++|
T Consensus 255 ~~~r~~L~~~L~~~g-~~---~----~~~~lF~~-~~~~~------------a~~~~~~L~~~GIlVR~f~---~p~~LR 310 (339)
T PRK06959 255 AADGARLAALLRAHG-FA---V----HATPLFSW-TDDPR------------AAALHAALAARGIWTRYFA---APPSVR 310 (339)
T ss_pred HHHHHHHHHHHHHCC-CC---C----CCCEEEEE-ECCCC------------HHHHHHHHHHCCEEEEECC---CCCCEE
T ss_conf 999999999999779-98---6----67205898-46889------------9999999984992995889---999889
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86158889999999999999999999998
Q gi|254780153|r 357 VWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 357 Ig~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
||+-+ ++++.++|++||..+....++.
T Consensus 311 i~vp~--~e~e~~RL~~AL~e~l~~~~~~ 337 (339)
T PRK06959 311 IGLPA--DEAEWQRLEDALAECVPTLAAA 337 (339)
T ss_pred EECCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86789--9999999999999999986642
No 241
>PRK08175 aminotransferase; Validated
Probab=98.94 E-value=5.1e-06 Score=57.63 Aligned_cols=313 Identities=12% Similarity=0.078 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHCC-CCCCC---CHHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 6899998632103-65328---988999999999999999688998--57999748734899987532057897079970
Q gi|254780153|r 25 PGWSLGILEGALL-GRSHR---CVLGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSLLGYRGVDVLAW 98 (391)
Q Consensus 25 p~~v~~~~~~~~l-~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~ 98 (391)
|..+++++.+.+- +..|+ +.-..++-+.+-+.+++-++..-+ .+|+ ++.|++.++..+++.++++||.+++..
T Consensus 44 p~~i~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~ii-vt~Ga~~al~~~~~al~~pGD~Vli~~ 122 (395)
T PRK08175 44 PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAI-VTIGSKEGLAHLMLATLDHGDTVLVPN 122 (395)
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE-ECCCHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 9999999999976999888899757499999999999998689878788399-888879999999997279989899778
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEE-----EECCCCCCEE
Q ss_conf 73688888765323876306740--577765786767-----85565799742024202203203-----5025686148
Q gi|254780153|r 99 ESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLV 166 (391)
Q Consensus 99 g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~ll 166 (391)
=.|...... +.. .+..+..+. ...+...++++. +..+.+.++.=..-||...+..+ .+|..++.++
T Consensus 123 P~Yp~y~~~-~~~-~g~~~~~vpl~~~~~~~~~le~~~~~~~~ktk~iiln~P~NPTG~v~s~e~l~~i~~~a~~~~i~v 200 (395)
T PRK08175 123 PSYPIHIYG-AVI-AGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLV 200 (395)
T ss_pred CCCCCHHHH-HHH-HCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEE
T ss_conf 774014999-998-478407850457776044199999726877459998899998887579999999999888669489
Q ss_pred EEEECCHHH---HCC------CC-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH
Q ss_conf 864011011---025------45-56857999700120017665--1544567788876541144577831232001123
Q gi|254780153|r 167 ICDATSAVF---ARH------ID-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391)
Q Consensus 167 ivD~vSs~g---~~p------~d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391)
|.|-+=+-. +.+ ++ ....-+.+.|.-|.++ -|| +|.++.+++.+++....+. +
T Consensus 201 isDEiY~~l~~d~~~~~s~~~~~~~~~~~i~~~S~SK~f~-~~G~RiG~ii~~~~~i~~~~~~~~------------~-- 265 (395)
T PRK08175 201 VHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYN-MAGWRIGFMVGNPELVSALARIKS------------Y-- 265 (395)
T ss_pred EECCCHHHHCCCCCCCCCHHHCCCCCCCEEEEEECCCCCC-CCCCCEEEEECCHHHHHHHHHHHH------------H--
T ss_conf 8235314210288778685447456465489950322347-775456999649999999999998------------7--
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247
Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
....+++. .-++...+|+.- +.-++.+.+.++++.+.+.+.+...+ +... .|+ +..-+-..+++
T Consensus 266 --------~~~~~~~~-~Q~aa~~al~~~--~~~~~~~~~~~~~rr~~l~~~L~~~g-~~~~--~P~--G~~y~w~~~~~ 329 (395)
T PRK08175 266 --------HDYGTFTP-LQVAAIAALEGD--QQCVRDIAEQYKRRRDVLVKGLHEAG-WMVE--MPK--ASMYVWAKIPE 329 (395)
T ss_pred --------CCCCCCHH-HHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEE--CCC--EEEEEEEECCC
T ss_conf --------04687679-999999998598--99999999999999999999998759-8540--689--66699688888
Q ss_pred CCCCCCCHHHHHHHHHHHH-HHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 3101137345678889999-98886282872665-5676750-568615888999999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSML-SFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
+.. ..+ ..++. .++.+.|+++--|. +...|.+ +|++.. .+.+.++.-++.|+.+|+.
T Consensus 330 ~~~-~~~-------~~ef~~~ll~e~~V~v~PG~~Fg~~g~~~vRl~~~--~~~~~l~eal~Ri~~~~~a 389 (395)
T PRK08175 330 PYA-AMG-------SLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAVRGIKAMFRA 389 (395)
T ss_pred CCC-CCC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
T ss_conf 767-899-------89999999984989997773327799986999972--8999999999999999986
No 242
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.94 E-value=3.1e-07 Score=65.38 Aligned_cols=321 Identities=13% Similarity=0.088 Sum_probs=155.8
Q ss_pred CHHHHHHHHHHHCCC-C-CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC
Q ss_conf 968999986321036-5-3289889999999999999996889985799974873489998753205--78970799707
Q gi|254780153|r 24 RPGWSLGILEGALLG-R-SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~-~-sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391)
+|+ |.+++.+++=. . ++...+ ..-+.-+.|.+++ |.-.+|.| ..|||.+.|+++.=-. ..+.+++...|
T Consensus 71 ~p~-v~~Ai~~q~~~g~~~~~~~~---~~~~lAe~l~~~~--p~~~~v~F-~~sGsEA~e~AiklAR~~tgr~kii~~~~ 143 (429)
T PRK12389 71 HPH-ITKAIQTAAENGVLYGTPTE---LEIEFAKMLKEAI--PSLEKVRF-VNSGTEAVMTTIRVARAYTGRTKIIKFAG 143 (429)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHC--CCCCEEEE-ECCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 899-99999999823885779989---9999999999857--88766986-26842899999999998349996541145
Q ss_pred CHHHHH--HHHHH-----HCCCCC---------EEEEECCCCCCCCHHH-CC-CCCCEEEEEEECC---CCEEECCE---
Q ss_conf 368888--87653-----238763---------0674057776578676-78-5565799742024---20220320---
Q gi|254780153|r 100 SFGLGW--MSDIR-----QLSLQD---------VREFTAPYGSLPDFSK-VD-FDRDVVFVWNGTT---SGVCVPDV--- 155 (391)
Q Consensus 100 ~~~~r~--~~~~~-----~~~~~~---------~~~~~~~~g~~~~~~~-~~-~~~~v~~~h~ETs---tGv~~~~~--- 155 (391)
.|=++. ..... ..+..+ ......|++....+++ ++ ...+++.+-.|-. .|+..|..
T Consensus 144 ~yHG~t~~~l~~~~~~~~~~~~p~~~g~p~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavI~EPi~g~~G~i~p~~~yl 223 (429)
T PRK12389 144 CYHGHSDLVLVAAGSGPSTLGTPDSAGVPESIAQEVITVPFNDIESYKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFL 223 (429)
T ss_pred CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCHHHH
T ss_conf 75998543223136885346898767887655565253078999999999984589668999602236788016998999
Q ss_pred ---EEECCCCCCEEEEEECCH-HHHCCC---CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf ---350256861488640110-110254---5568579997001200176651544567788876541144577831232
Q gi|254780153|r 156 ---GFIPESREGLVICDATSA-VFARHI---DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 156 ---~~~~~~~~~llivD~vSs-~g~~p~---d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
+.+|.++++|+|+|=|.+ |..-.. +..++.=.+...-|+|++===++.++.+++..+..... .+
T Consensus 224 ~~lr~lc~~~giLLI~DEV~TGfR~g~~~a~~~~gV~PDi~t~gK~lggG~Pi~av~g~~eim~~~~~~---g~------ 294 (429)
T PRK12389 224 EEVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVIPDLTALGKIIGGGLPIGAYGGRQDIMEQVAPL---GP------ 294 (429)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHCCCCCCCHHHEHHHCCCCCCEEEEEEHHHHHHHHCCC---CC------
T ss_conf 999999997198899965510315666707655389997100103227986448876779999873157---98------
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI 308 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v 308 (391)
...++|++--|+ ...+...+|+.+++++=+++..++-+...+.+.+..++.+... .....++...+
T Consensus 295 ----------~~~~gTf~gnpl-a~AAalA~L~~l~~~~l~~~~~~~G~~l~~gl~~l~~~~~~~~---~v~~~g~~~~i 360 (429)
T PRK12389 295 ----------AYQAGTMAGNPA-SMAAGIACLEVLQQEGVYEKLDELGAMLEEGILKLAEKHNITI---TINRLKGALTV 360 (429)
T ss_pred ----------CEECCCCCCCHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCE---EEEECCCEEEE
T ss_conf ----------502588886889-9999999999997168999999999999999999998779987---99414856899
Q ss_pred EEEECCCCCCCCCHH--HHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 898247310113734--56788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 309 CMKIVDSDIASLDIN--SQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 309 ~~~~~d~~~~~~~~~--~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
. +.+....+.... .+......+...+.++|+.+...++ ..+.++ -.++++||+..++++|.+|+++
T Consensus 361 ~--f~~~~v~~~~~~~~~~~~~~~~~~~~ml~~Gv~~~p~~~----~~~~ls--~~hTe~dId~~l~a~d~al~~l 428 (429)
T PRK12389 361 Y--FTDEKVTDYDQAERSDGEAFGKFFKLMLNQGINLAPSKY----EAWFLT--TEHTEEDIEETIKAVDRAFAQM 428 (429)
T ss_pred E--ECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC----CCCCCC--CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9--458988898998615799999999999978864568677----774164--6789999999999999999975
No 243
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.91 E-value=1.2e-06 Score=61.61 Aligned_cols=289 Identities=19% Similarity=0.162 Sum_probs=162.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHCCCCCE
Q ss_conf 3289889999999999999996889985799974873489998753205789707997073688--88876532387630
Q gi|254780153|r 40 SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGL--GWMSDIRQLSLQDV 117 (391)
Q Consensus 40 sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~ 117 (391)
+-++.+-...+++....|. +... + +...||-+|+..+++.++++||.++.....||. +......+..+.++
T Consensus 58 ~R~~nPT~~~lE~~~a~LE---g~~~---~-~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~ 130 (396)
T COG0626 58 SRTGNPTRDALEEALAELE---GGED---A-FAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEV 130 (396)
T ss_pred CCCCCCCHHHHHHHHHHHH---CCCC---E-EEECCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEE
T ss_conf 0578963799999999860---9883---7-9953739999999998357999898457764329999999998568599
Q ss_pred EEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEEECCH--HHHCCCCCCCCEEEEEC
Q ss_conf 674057776578676785565799742024202203203-----50256861488640110--11025455685799970
Q gi|254780153|r 118 REFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICDATSA--VFARHIDFNKLDVVTFS 190 (391)
Q Consensus 118 ~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs--~g~~p~d~~~iDv~~a~ 190 (391)
........... .+.+. .+..-+++.||-+--.+.+.. .+++.+++++|||-+=+ +.-.|++. ++|+++-|
T Consensus 131 ~~~d~~~~~~~-~~~~~-~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~-GaDIVvhS 207 (396)
T COG0626 131 TFVDPGDDEAL-EAAIK-EPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLEL-GADIVVHS 207 (396)
T ss_pred EEECCCCHHHH-HHHHC-CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHH-CCCEEEEE
T ss_conf 99789975889-98744-66834999967999630555699999999864988999889662201685550-99789985
Q ss_pred CHHCCCCCCCC--EEEEE-CHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 01200176651--54456-7788876541144577831232001123210334786446664488999999998620103
Q gi|254780153|r 191 AQKVLGGEAGF--GIIIL-SPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG 267 (391)
Q Consensus 191 sQK~l~~ppGl--~~v~~-s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g 267 (391)
.-|=|+|-.=+ |+|+. +++..++... .+ +...|. .+.-+.-|.+...| .
T Consensus 208 aTKyl~GHsDvl~G~v~~~~~~~~~~~~~-----------~~--------~~~~G~---~l~p~dA~l~lRGl------k 259 (396)
T COG0626 208 ATKYLGGHSDVLGGVVLTPNEELYELLFF-----------AQ--------RANTGA---VLSPFDAWLLLRGL------R 259 (396)
T ss_pred CCCCCCCCCCEEEEEEECCHHHHHHHHHH-----------HH--------HHHCCC---CCCHHHHHHHHHCC------C
T ss_conf 43333677350416884486899999999-----------98--------865278---78879999998171------5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC------C--------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 1899999999779999999874797167668820------0--------3653178982473101137345678889999
Q gi|254780153|r 268 GLSACVERCNANAAVLFQFIQENDWIENLAVDET------T--------RSNTSICMKIVDSDIASLDINSQKSFCKSML 333 (391)
Q Consensus 268 Gl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~------~--------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 333 (391)
.+.-|.+||++++..+-+|++..+..... -.|. + .....+.|.+.+. ...+.+.
T Consensus 260 TL~~Rm~~~~~nA~~IA~~L~~~p~V~~V-~yPgl~shp~he~~krq~~g~gg~~Sf~l~~~-----------~~~~~f~ 327 (396)
T COG0626 260 TLALRMERHNENALKIAEFLADHPKVKKV-YYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-----------EAAKKFL 327 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHCCCCCEEEEEEECCH-----------HHHHHHH
T ss_conf 39999999999899999998629976899-89999889768999974579860899996785-----------8999999
Q ss_pred HHHHHCCEEECCCCCCCC-----------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 988862828726655676-----------------------7505686158889999999999999999999
Q gi|254780153|r 334 SFLEKEEIAYDIGSYRDA-----------------------PLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 334 ~~l~~~g~~~~~~~~r~~-----------------------~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
..|..-..+..+||+.+. +.-+|++++ .||++.|++-|+.++...
T Consensus 328 ~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG----lEd~eDLiaDl~~Al~~~ 395 (396)
T COG0626 328 DSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG----LEDVEDLIADLEQALAKA 395 (396)
T ss_pred HHCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHHH
T ss_conf 72782378326877440001665567554898789865999982899956----799899999999999852
No 244
>PRK06942 glutamate-1-semialdehyde 2,1-aminomutase; Validated
Probab=98.91 E-value=6.7e-07 Score=63.26 Aligned_cols=319 Identities=13% Similarity=0.053 Sum_probs=159.5
Q ss_pred CHHHHHHHHHHHCCC-C--CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEE
Q ss_conf 968999986321036-5--32898899999999999999968899857999748734899987532057-89-7079970
Q gi|254780153|r 24 RPGWSLGILEGALLG-R--SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAW 98 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~-~--sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~ 98 (391)
+|+ |.+++++++-. . ++-++. .-+.-+.|.+++ |.-..|+| ..|||.+.|+++.=--. .+ +.++...
T Consensus 68 ~p~-v~~Av~~q~~~~~~~~~~~~~----~~~lAe~L~~~~--P~~~~v~f-~~SGsEA~e~AiklAR~~tgr~~ii~~~ 139 (425)
T PRK06942 68 HPE-VLRAVQRVLADGFSFGAPTEA----EIEIAEEICKLV--PSIEQVRM-VSSGTEATMSALRLARGFTGRSRIVKFE 139 (425)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCHH----HHHHHHHHHHHC--CCCCEEEE-ECCHHHHHHHHHHHHCCCCCCCCCCEEC
T ss_conf 799-999999999857857899789----999999999858--89885987-3887999999999961034798653123
Q ss_pred CCHHHHHHHHHHHCC-------CCCE---------EEEECCCCCCCCHHH-C-CCCCCEEEEEEECCCC---EEECC---
Q ss_conf 736888887653238-------7630---------674057776578676-7-8556579974202420---22032---
Q gi|254780153|r 99 ESFGLGWMSDIRQLS-------LQDV---------REFTAPYGSLPDFSK-V-DFDRDVVFVWNGTTSG---VCVPD--- 154 (391)
Q Consensus 99 g~~~~r~~~~~~~~~-------~~~~---------~~~~~~~g~~~~~~~-~-~~~~~v~~~h~ETstG---v~~~~--- 154 (391)
|+|=++.-..+...+ .... .....+++....+++ + .....++.+-.|...| +..|.
T Consensus 140 g~YHG~~~~~~~~~~~~~~~~~~p~~~g~p~~~~~~~~~~~~nd~~~l~~~~~~~~~~iAAvI~EPi~g~~G~i~p~~~y 219 (425)
T PRK06942 140 GCYHGHADSLLVKAGSGLLTFGNPTSAGVPADVAKHTTVLEYNNVAALEEAFAAFGGEIAAVIVEPVAGNMNLVRGTPEF 219 (425)
T ss_pred CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHH
T ss_conf 45147741021213787655588865688765457664667676888999998438966899955644778750289899
Q ss_pred ---EEEECCCCCCEEEEEECCH-HHHCCC---CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf ---0350256861488640110-110254---556857999700120017665154456778887654114457783123
Q gi|254780153|r 155 ---VGFIPESREGLVICDATSA-VFARHI---DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIF 227 (391)
Q Consensus 155 ---~~~~~~~~~~llivD~vSs-~g~~p~---d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~ 227 (391)
.+.+|+++++++|+|=|.+ |-.-.+ +..++.-.+...-|+|++==-++.++.+++..+... +..
T Consensus 220 l~~lr~lc~~~gilLI~DEV~TGfR~g~~~a~~~~gv~PDi~t~gK~iggG~Pi~Av~g~~eim~~~~---~~g------ 290 (425)
T PRK06942 220 LNALRALCTKHGAVLIFDEVMCGFRVALGGAQQHYGITPDLTCLGKVIGGGMPAAAFGGRRDIMAHLA---PLG------ 290 (425)
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEHHHCCCCCCCEEEEEHHHHHHHCC---CCC------
T ss_conf 99999986137838999746257406765387621899879987100579887021025999997506---788------
Q ss_pred HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf 20011232103347864466644889999999986201031899999999779999999874797167668820036531
Q gi|254780153|r 228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTS 307 (391)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~ 307 (391)
....+.|++--|+ ...+....|+.+++++=+++..++-++..+-+.+.++..+. ...+ ...-|...
T Consensus 291 ----------~~~h~gTf~gnp~-a~AAalatL~~~~~~~~~~~~~~~g~~L~~gl~~~~~~~g~-~~~~--~g~gs~f~ 356 (425)
T PRK06942 291 ----------GVYQAGTLSGNPI-AVAAGLKTLRLIQAPGFYDALAAQTRRLADGLAAEARAAGV-PFAA--DSIGGMFG 356 (425)
T ss_pred ----------CCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CEEE--EEECCEEE
T ss_conf ----------8722789987879-99999999999845679999999999999999999997799-8899--65376479
Q ss_pred EEEEECCCCCCCCCH--HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 789824731011373--456788899999888628287266556767505686-158889999999999999999999
Q gi|254780153|r 308 ICMKIVDSDIASLDI--NSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 308 v~~~~~d~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
+.| .+....+... ..+......+...+.++|+.+.- .++.-| +--+.+++||+..+++.|.+|+++
T Consensus 357 ~~f--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gv~~~p-------~~~~~~f~s~aHt~~did~~l~a~~~a~~~l 425 (425)
T PRK06942 357 LYF--TERVPTSFAEVTKSDVERFNRFFHLMLDEGVYFAP-------SAYEAGFVSSTHDDAVLDATLDAARRAFAAL 425 (425)
T ss_pred EEE--CCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCC-------CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 986--89999999999855499999999999978967798-------5242176230379999999999999999739
No 245
>PRK08960 hypothetical protein; Provisional
Probab=98.90 E-value=7e-06 Score=56.77 Aligned_cols=323 Identities=14% Similarity=0.072 Sum_probs=165.7
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCC-CCCCCH--HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCC
Q ss_conf 8868887768-968999986321036-532898--8999999999999999688998-5799974873489998753205
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLG-RSHRCV--LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLL 88 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~-~sHRs~--~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~ 88 (391)
.+|+-|=... +|..+++++...+-. .+|=++ =..++-+.+.+.+++-++.+-+ -+| +++.|++.++..++.-++
T Consensus 35 i~l~~G~pdf~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~d~I-~vt~G~~~al~~~~~~l~ 113 (387)
T PRK08960 35 IHLEIGEPDFTTAAPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGLDVDPERI-LVTPGGSGALLLASSLLV 113 (387)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHE-EECCCHHHHHHHHHHHHC
T ss_conf 7889948999889999999999985389988998772999999999999985899984328-980866999999999956
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----E
Q ss_conf 7897079970736888887653238763067-4057776578676785-----565799742024202203203-----5
Q gi|254780153|r 89 GYRGVDVLAWESFGLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----F 157 (391)
Q Consensus 89 ~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~ 157 (391)
++||.+++-.=.|..-. ..+...++..+.+ ...+.+..++++.++. .+.+.++.-..-||...+..+ .
T Consensus 114 ~pGD~Vlv~~P~Yp~~~-~~~~~~~~~~~~vp~~~~~~~~~~~~~le~~~~~~~~~iil~nP~NPTG~v~s~~~l~~l~~ 192 (387)
T PRK08960 114 DPGKHWLLADPGYPCNR-HFLRLVEGAAQLVPVGPDTRYQLTPALVERHWDSDSVGALVASPANPTGTLLSRDELAALSQ 192 (387)
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 99987998178765528-99998537449997575447788999999727878729997689898863146899999999
Q ss_pred ECCCCCCEEEEEECCHHHHCC------CCCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 025686148864011011025------4556857999700120017665--15445677888765411445778312320
Q gi|254780153|r 158 IPESREGLVICDATSAVFARH------IDFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391)
Q Consensus 158 ~~~~~~~llivD~vSs~g~~p------~d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391)
+|.+++.++|.|-+=+-...+ +...+--+++.|.-|.++. || +|.++..++.+++......
T Consensus 193 ~a~~~~~~vI~DEiY~~l~~~~~~~s~~~~~~~~i~i~S~SK~~~~-~G~RiG~~v~p~~~i~~~~~~~~---------- 261 (387)
T PRK08960 193 ALKARGGHLVVDEIYHGLTYGVDAASVLEVDDSAFVLNSFSKYFGM-TGWRLGWLVAPPAAVPELEKLAQ---------- 261 (387)
T ss_pred HHHHCCCEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC-CCCEEEEEEECHHHHHHHHHHHH----------
T ss_conf 8762397799844614412589865311367877999506432557-76305899988999999999998----------
Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 01123210334786446664488999999998620103189999999977999999987479716766882003653178
Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
.+...++...-++...+++. ....-++.+.++++++.+.+.+.+...++.... .|+ +..-+-
T Consensus 262 -------------~~~~~~~~~~Q~aa~~al~~-~~~~~~~~~~~~~~~rrd~l~~~l~~~~~~~~~--~P~--G~~y~w 323 (387)
T PRK08960 262 -------------NLYISASSMAQHAALACFEP-ETIAILEARRAEFQRRRDFLLPALRELGFGIAV--EPQ--GAFYLY 323 (387)
T ss_pred -------------HCCCCCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCC--EEEEEE
T ss_conf -------------54377987999999999621-559999999999999999999999975996045--898--666997
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC--CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9824731011373456788899999-8886282872665--567675-05686158889999999999999999
Q gi|254780153|r 310 MKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS--YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~--~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
+.++... .+ ...+.. ++.+.|+++--|. +...+. -+|++... +.++++.-++-|..++
T Consensus 324 ~~~~~~~---~d-------~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~~Rls~~~--~~~~l~eal~RL~~~L 385 (387)
T PRK08960 324 ADISAFG---GD-------AFAFCRHFLETEHVAFTPGLDFGRHQAGHHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred EECCCCC---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHH
T ss_conf 8888889---99-------9999999998699999747220899999989999769--9999999999999996
No 246
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.89 E-value=8.1e-07 Score=62.72 Aligned_cols=313 Identities=15% Similarity=0.132 Sum_probs=175.9
Q ss_pred HHHHHHHHHCCCC------CCC---CHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-----CC
Q ss_conf 9999863210365------328---988999-99999999999968899857999748734899987532057-----89
Q gi|254780153|r 27 WSLGILEGALLGR------SHR---CVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-----YR 91 (391)
Q Consensus 27 ~v~~~~~~~~l~~------sHR---s~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-----~~ 91 (391)
.|+++++..+-.. .+| +.++.+ +=.-+.++.+++|+... +-+-+-||+.+.-|+.+.++. ||
T Consensus 66 aV~ea~gS~ltnKYAEGyPG~RYY~Gce~vD~iE~lai~rak~LF~a~~---aNVQP~SGs~AN~avy~All~~~v~~Pg 142 (493)
T PRK13580 66 AVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDAIEWEAAEHARELFGAEH---AYVQPHSGADANLVAFWAILAHKVEAPA 142 (493)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999856731012458899863237757799999999999999838985---0327787607789999998600024864
Q ss_pred --------------------------CEEEEE----ECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCC-----C
Q ss_conf --------------------------707997----073688888765323876306740-5777657867678-----5
Q gi|254780153|r 92 --------------------------GVDVLA----WESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVD-----F 135 (391)
Q Consensus 92 --------------------------~~~~~~----~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~-----~ 135 (391)
+.++.. .|..+.....-+.... .++..+. .+.....|.+++. .
T Consensus 143 l~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~~~n~sg~~-~~~~~Y~vd~et~~IDyD~~~~~A~~~ 221 (493)
T PRK13580 143 LSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGFRPNISGKM-FRQRSYGVDPDTGLLDYDEIAALAREF 221 (493)
T ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEE-EEEEECCCCCCCCCCCHHHHHHHHHHC
T ss_conf 2233433323233012222202467886870588878663369965634226-887875366334840899999999974
Q ss_pred CCCEEEEEEECCCCEEEC--CEEEECCCCCCEEEEEECCHHH--H---CC---CCCCCCEEEEECCHHCCCCCCCCEEEE
Q ss_conf 565799742024202203--2035025686148864011011--0---25---455685799970012001766515445
Q gi|254780153|r 136 DRDVVFVWNGTTSGVCVP--DVGFIPESREGLVICDATSAVF--A---RH---IDFNKLDVVTFSAQKVLGGEAGFGIII 205 (391)
Q Consensus 136 ~~~v~~~h~ETstGv~~~--~~~~~~~~~~~llivD~vSs~g--~---~p---~d~~~iDv~~a~sQK~l~~ppGl~~v~ 205 (391)
.+.+.++-. ++.--..| ..+.++.+.++.+++|+.--.| + .| =++...|++.++.+|-|-||-| +++.
T Consensus 222 kPKlII~G~-SaYpr~idf~~freIAdeVGA~LmaDiAHiaGLVA~g~~~~h~sP~~~ADvVTtTTHKTLrGPRG-GiIl 299 (493)
T PRK13580 222 KPLVLVAGY-SAYPRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVL 299 (493)
T ss_pred CCCEEEECC-CCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CEEE
T ss_conf 998899776-24656448799999999719789810566767764254568999513351575123445678885-0688
Q ss_pred ECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 67788876541144577831232001123210334786446664488999999998620103189999999977999999
Q gi|254780153|r 206 LSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQ 285 (391)
Q Consensus 206 ~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~ 285 (391)
.+++..++..... ..+-.-|-.+.|.+...++.+.... ......++..++++.+-+
T Consensus 300 ~~~e~~~~Id~av-----------------------Pg~QGGP~~h~IAakAvaf~EA~~p-eFk~Y~~qVv~NAkaLA~ 355 (493)
T PRK13580 300 AKKEYAEAVDKGC-----------------------PLVLGGPLPHVMAAKAVALAEARTP-DFKKYAHRVVDNARALAE 355 (493)
T ss_pred ECHHHHHHHCCCC-----------------------CCCCCCHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHH
T ss_conf 4647787651038-----------------------7546872776999999999997277-789999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC------CCCCCEEEEEC
Q ss_conf 987479716766882003653178982473101137345678889999988862828726655------67675056861
Q gi|254780153|r 286 FIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY------RDAPLGLRVWV 359 (391)
Q Consensus 286 ~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------r~~~~~~RIg~ 359 (391)
.+...+ +.... -..-+. .+.+.+..-.+. + +..-..|.+.|+.+.-+.- ...+.|+|||+
T Consensus 356 ~L~~~G-~~vvs--GGTdnH-lvLvDl~~~g~t-------G---~~ae~~Le~~gI~vNKN~iP~D~~~p~~~SGIRiGt 421 (493)
T PRK13580 356 GFLKRG-ARLVT--GGTDNH-LLLIDVTSFGLT-------G---RQAEDALLDVGIVTNRNSIPSDPNGAWYTSGIRLGT 421 (493)
T ss_pred HHHHCC-CEEEC--CCCCCC-EEEEECCCCCCC-------H---HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEECC
T ss_conf 999889-94852--888877-588856778998-------8---999999987793871688989998898886411166
Q ss_pred CC----CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 58----8899999999999999999999
Q gi|254780153|r 360 GV----TVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 360 ~g----~i~~~dv~~L~~aLe~~~~~~k 383 (391)
-. ...++|+....++|..+++..+
T Consensus 422 pa~TtRGm~e~em~~ia~~I~~~l~~~~ 449 (493)
T PRK13580 422 PALTTLGMGSDEMDEVAELIVKVLRNTT 449 (493)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 6676189998999999999999995524
No 247
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.89 E-value=4.3e-06 Score=58.10 Aligned_cols=260 Identities=18% Similarity=0.154 Sum_probs=147.0
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
Q ss_conf 99999999968899857999748734899987532057897079970736888887653238763067405777657867
Q gi|254780153|r 52 KAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFS 131 (391)
Q Consensus 52 ~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~ 131 (391)
..++.++..++.++ +++.. |++..+...+. +.. ++.+++..=.|++. ..+.+..+..+.... .. +..
T Consensus 53 ~L~~a~a~~~g~~~---vl~gn-Gs~e~I~ll~~-l~~-~~~v~i~~PtfseY--~~a~~~~g~~v~~~~--~~---~~~ 119 (330)
T PRK05664 53 GLEAAARAYYGAPQ---LLPVA-GSQAAIQALPR-LRA-PGRVGVLSPCYAEH--AHAWRRAGHQVRELD--EA---EVE 119 (330)
T ss_pred HHHHHHHHHCCCCC---EEEEC-CHHHHHHHHHH-HHC-CCEEEECCCCHHHH--HHHHHHCCCEEEECC--HH---HHH
T ss_conf 99999998719973---99941-69999999999-748-99468848887999--999998699889768--77---776
Q ss_pred H-CCCCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECCHHHH-CC-------CCCCCCEEEEECCHHCCCC
Q ss_conf 6-7855657997420242022032035-----0256861488640110110-25-------4556857999700120017
Q gi|254780153|r 132 K-VDFDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATSAVFA-RH-------IDFNKLDVVTFSAQKVLGG 197 (391)
Q Consensus 132 ~-~~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs~g~-~p-------~d~~~iDv~~a~sQK~l~~ 197 (391)
. .+..+.+.+|.=..-||...+..+. .+..++.++|||=. +.- .| .+..++ ++.-+--|.+|
T Consensus 120 ~~~~~~d~v~l~nPNNPTG~~~~~~~l~~~~~~~~~~~~~lvvDEa--y~d~~~~~s~~~~~~~~nl-ivlrS~sK~~g- 195 (330)
T PRK05664 120 AALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEA--FMDNTPQHSLAACAHRPGL-IVLRSFGKFFG- 195 (330)
T ss_pred HCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECH--HHCCCCCHHHHHHCCCCCE-EEEEECCHHHC-
T ss_conf 2267889899827928866898999999999986531988999753--2116873114663358998-99840447426-
Q ss_pred CCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 6651--54456778887654114457783123200112321033478644666448899999999862010318999999
Q gi|254780153|r 198 EAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVER 275 (391)
Q Consensus 198 ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r 275 (391)
-||+ |+++.+++.+++......+| .-++....+...+|+ ++.-+....++
T Consensus 196 laGlRlGy~~a~~~~i~~l~~~~~pw-------------------------~Vn~~a~~aa~aaL~---d~~~~~~~~~~ 247 (330)
T PRK05664 196 LAGARLGFVLAEPALLRALAELLGPW-------------------------TVSGPTRWLAQAALA---DTPWQRQQRER 247 (330)
T ss_pred CCCCCCEEHCCCHHHHHHHHHHCCCC-------------------------CCCHHHHHHHHHHHC---CHHHHHHHHHH
T ss_conf 85403020108999999999844999-------------------------860999999999963---99999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEE
Q ss_conf 99779999999874797167668820036531789824731011373456788899999888628287266556767505
Q gi|254780153|r 276 CNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGL 355 (391)
Q Consensus 276 ~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~ 355 (391)
..+.++.+.+.+...+ +.+. .|..+..+. ..+. .+.+...|.++|+++.. -....++
T Consensus 248 l~~er~~l~~~L~~~g-~~~~------~s~anF~l~-~~~~------------a~~l~~~L~~~GIlVR~---~~~~~~L 304 (330)
T PRK05664 248 LLAASQRLAALLRRHG-LPPA------GGCALFQWV-RTED------------AAALHEFLARRGILTRL---FEQPPSL 304 (330)
T ss_pred HHHHHHHHHHHHHHCC-CEEC------CCCCEEEEE-ECCC------------HHHHHHHHHHCCEEEEE---CCCCCCE
T ss_conf 9999999999999788-8427------995369996-2599------------99999999969949978---8999977
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 686158889999999999999999999
Q gi|254780153|r 356 RVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 356 RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
|||... +++|-.+|.+||. ++.++
T Consensus 305 Ri~i~~--~e~~~~rL~~AL~-~~~~~ 328 (330)
T PRK05664 305 RFGLPA--DEADWARLDQALL-AYRKE 328 (330)
T ss_pred EEECCC--CHHHHHHHHHHHH-HHHHH
T ss_conf 985798--8788999999999-99973
No 248
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=98.89 E-value=2.2e-06 Score=59.92 Aligned_cols=296 Identities=15% Similarity=0.025 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH
Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888
Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391)
|..+.+++...+- ..||=|+-. ..+.++.+.+.++++.+ .|++ ..|++..+..++. .+.+++.++ +.=.|+..
T Consensus 35 p~~v~~ai~~~~~-~~~rYPd~~--~~~Lr~~iA~~~gv~~~-~I~v-gnGs~Eli~~i~~-~~~~~~~~i-~~Ptf~~Y 107 (356)
T PRK08056 35 PVSVKRALIDNLD-CIERYPDAD--YFHLHQALARHHQVPAS-WILA-GNGETESIFTVAS-GLKPRRAMI-VTPGFAEY 107 (356)
T ss_pred CHHHHHHHHHHHH-HHHCCCCCC--HHHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHH-HCCCCCEEE-ECCCHHHH
T ss_conf 9999999997475-774199824--89999999998298889-9887-5878999999998-548996699-78874999
Q ss_pred HHHHHHHCCCCCEEEEECC--CCCCCCH---HHCCCC-CCEEEEEEECCCCEEECCEE---E--ECCCCCCEEEEEECC-
Q ss_conf 8876532387630674057--7765786---767855-65799742024202203203---5--025686148864011-
Q gi|254780153|r 105 WMSDIRQLSLQDVREFTAP--YGSLPDF---SKVDFD-RDVVFVWNGTTSGVCVPDVG---F--IPESREGLVICDATS- 172 (391)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~--~g~~~~~---~~~~~~-~~v~~~h~ETstGv~~~~~~---~--~~~~~~~llivD~vS- 172 (391)
..+++..+..+...... .+...+. +.++.. +.+.+|.=..-||...+... + .+..++.++|+|=.=
T Consensus 108 --~~~a~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY~ 185 (356)
T PRK08056 108 --GRALAQVGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIADRCKSLNINLILDEAFI 185 (356)
T ss_pred --HHHHHHCCCEEEEEECCHHHCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHH
T ss_conf --999998597699986773315897699997336788889981899998875899999999987240493999744557
Q ss_pred HHHH-CC--CC-CCCC-EE-EEECCHHCCCCCCCCEE--EEECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCC
Q ss_conf 0110-25--45-5685-79-99700120017665154--45677-88876541144577831232001123210334786
Q gi|254780153|r 173 AVFA-RH--ID-FNKL-DV-VTFSAQKVLGGEAGFGI--IILSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE 243 (391)
Q Consensus 173 s~g~-~p--~d-~~~i-Dv-~~a~sQK~l~~ppGl~~--v~~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (391)
.|.. .+ ++ ..+. .+ +.-+--|.+| -||+=+ ++.++ .++++......
T Consensus 186 ef~~~~~s~~~~~~~~~nlivlrTfSK~~g-laGlRiGy~i~~~~~~i~~l~~~~~------------------------ 240 (356)
T PRK08056 186 DFIPHETGFIPALKDNPHIWVLRSLTKFYA-IPGLRLGYLVNSDDAAVARMRRQQM------------------------ 240 (356)
T ss_pred HHCCCCCCHHHHHHCCCCEEEEEECCHHCC-CCCCCHHHHHCCCHHHHHHHHHHCC------------------------
T ss_conf 643586135799845997899841416406-8520001110588999999996158------------------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCCCCCCCCH
Q ss_conf 4466644889999999986201031899999999779999999874797167668820036531789-824731011373
Q gi|254780153|r 244 TINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDSDIASLDI 322 (391)
Q Consensus 244 ~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~~~~~~~~ 322 (391)
++.-+.....+...+|+ .+.=++...+...+..+.+++.+.+.+++..+. |.+|..+ +++.+.
T Consensus 241 -p~~vn~~a~~aa~~al~---d~~~~~~~~~~i~~~r~~l~~~L~~l~g~~v~p------s~aNFil~~~~~~~------ 304 (356)
T PRK08056 241 -PWSINALAALAGEVALQ---DSAWQQATWHWLREEGARFYQALCQLPLLTVYP------GRANYLLLRCERED------ 304 (356)
T ss_pred -CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC------CCCCEEEEECCCCH------
T ss_conf -99811999999999836---999999999999999999999986589978898------98878999889999------
Q ss_pred HHHHHHHHHHHHHHHHCCEEECC-CCCCCCC-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 45678889999988862828726-6556767-5056861588899999999999999999
Q gi|254780153|r 323 NSQKSFCKSMLSFLEKEEIAYDI-GSYRDAP-LGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 323 ~~~~~~~~~~~~~l~~~g~~~~~-~~~r~~~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
..+...|.++|+++.- ..++..+ .-+||+.+ ++++.++|+++|+..+.
T Consensus 305 -------~~~~~~L~~~gIlVR~~~~f~gl~~~~lRisig---t~~en~~ll~aL~~iL~ 354 (356)
T PRK08056 305 -------IDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVLT 354 (356)
T ss_pred -------HHHHHHHHHCCEEEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf -------999999996890997678889999998999759---99999999999999973
No 249
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=98.89 E-value=2.1e-06 Score=60.06 Aligned_cols=302 Identities=13% Similarity=0.074 Sum_probs=155.2
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------CC-CC-CEE
Q ss_conf 9689999863210365328988999-999999999999688998579997487348999875320------57-89-707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------LG-YR-GVD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~~-~~-~~~ 94 (391)
+|+ |.+++.+++-..-|-+..|.. ...+.-++|..+. +.+ .|+| ..||+.++|+++.=- -+ ++ .++
T Consensus 49 ~p~-i~~ai~~q~~~l~~~~~~~~~~~~~~la~~L~~~~--~~d-~v~f-~~sGsEAve~AlklAr~~~~~~g~t~r~~i 123 (389)
T PRK01278 49 HPH-LVEALKEQAEKLWHVSNLYRIPEQERLAERLVENS--FAD-KVFF-TNSGAEAVECAIKTARRYQYGKGHPERYRI 123 (389)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC--CCC-EEEE-ECCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 789-99999999865667656536879999999975336--768-7999-687489999999999998885399997289
Q ss_pred EEEECCHHHHHHHHHHHCCCCCEE---------EEECCCCCCCCHHHCCC--CCCEEEEEEECCCC---EEECC------
Q ss_conf 997073688888765323876306---------74057776578676785--56579974202420---22032------
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD------ 154 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~------ 154 (391)
+...++|=++....+..-+..... ....+ ..+.+.+.. .+.++.+-.|...| +..+.
T Consensus 124 i~~~~~yHG~t~~~~s~sg~~~~~~~~~p~~~~~~~~~---~~d~~~l~~~~~~~iAaviiEPi~g~gG~~~~~~~yl~~ 200 (389)
T PRK01278 124 ITFEGAFHGRTLATIAATGQEKYLEGFGPLVDGFDQVP---FGDIEALKAAITPNTAAILIEPIQGEGGIRPLPDEFLKG 200 (389)
T ss_pred EEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECC---CCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 99888888676351135788443366689988824677---897899998628881799996888888960699999999
Q ss_pred EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHH
Q ss_conf 035025686148864011011025---4--556857999700120017665--154456778887654114457783123
Q gi|254780153|r 155 VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIF 227 (391)
Q Consensus 155 ~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~ 227 (391)
...+|+.+++++|+|=|.+=.++- + +.+++.=.+....|+|++ | ++.++.+++..+.. .+
T Consensus 201 l~~lc~~~g~llI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~g--G~P~sav~~~~ei~~~~---~~-------- 267 (389)
T PRK01278 201 LRQLCDENGLLLIFDEVQCGVGRTGKLFAHEWAGVTPDIMALAKGIGG--GFPLGACLATEEAAKGM---TP-------- 267 (389)
T ss_pred HHHHHHHHCCEEEEEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCCC--CCCEEEEEECHHHHHHC---CC--------
T ss_conf 999998606538742100077755664220036768986787012468--87427998638878543---68--------
Q ss_pred HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCC
Q ss_conf 20011232103347864466644889999999986201031899999999779999999874797167-66882003653
Q gi|254780153|r 228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETTRSNT 306 (391)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~rS~~ 306 (391)
...++|+..-|+ ...+..++|+.+++++ ..++.+++.+.+.+.+..+---.+ ++.+ .|...
T Consensus 268 -----------g~~~~T~~gnp~-~~aaala~L~~i~~~~----l~~~v~~~G~~l~~~L~~l~~~~p~~i~~--vRG~G 329 (389)
T PRK01278 268 -----------GTHGSTYGGNPL-AMAVGNAVLDVVLAPG----FLDNVQKMGLYLKQKLESLVDRFPDVIEE--VRGEG 329 (389)
T ss_pred -----------CCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE--EEEEE
T ss_conf -----------876779997999-9999999999998646----99999999999999999998768671355--64503
Q ss_pred EE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 17-8982473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r 307 SI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 307 ~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
.. .+.+.++ ...+...+.++|.++...+ +..+|+.--=.++.++|+.++++||.++.+
T Consensus 330 l~~gie~~~~-------------~~~i~~~~~~~Gll~~~~g----~~~lr~~PpL~it~~ei~~~~~~l~~al~~ 388 (389)
T PRK01278 330 LMLGLKCVVP-------------SRDLVAALRDEGLLTVPAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred EEEEEEECCC-------------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6999994588-------------9999999997993897279----997999788139899999999999999975
No 250
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.88 E-value=6.3e-06 Score=57.05 Aligned_cols=276 Identities=13% Similarity=0.114 Sum_probs=151.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 28988999999999999999688998579997487348999875320578970799707368888876532387630674
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF 120 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~ 120 (391)
||=|+- -..+.++.+.+.++++.+ .|++..| ++..+..++ .++.+++.+ +..=.|+.. ...++..+..+..+
T Consensus 35 ~rYPd~--~~~~Lr~~iA~~~~v~~~-~I~vgnG-s~ElI~~l~-~~~~~~~~~-i~~PtF~~Y--~~~a~~~g~~~~~v 106 (332)
T PRK06425 35 SIYPEI--SYTDIEDQIKIYTQGLKI-KVLIGPG-LTHFIYRLL-SYINVGNII-IVEPNFNEY--KGYAFTHGIRISAL 106 (332)
T ss_pred HHCCCC--CHHHHHHHHHHHHCCCHH-HEEECCC-HHHHHHHHH-HHHCCCCEE-EECCCHHHH--HHHHHHCCCEEEEE
T ss_conf 429499--869999999988696867-3998220-999999999-986899989-968888999--99999869989995
Q ss_pred ECCCCCC-CCHHHCC--CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECCH-HHHCC----CC-CCCC-E
Q ss_conf 0577765-7867678--55657997420242022032035-----0256861488640110-11025----45-5685-7
Q gi|254780153|r 121 TAPYGSL-PDFSKVD--FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATSA-VFARH----ID-FNKL-D 185 (391)
Q Consensus 121 ~~~~g~~-~~~~~~~--~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs-~g~~p----~d-~~~i-D 185 (391)
|.... .+.+.+. ..+.+.+|.=..-||...+..+. .+..++.++|+|-.=. |.... +. ..+. .
T Consensus 107 --p~~~~~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY~ef~~~~~~~~~~l~~~~~N 184 (332)
T PRK06425 107 --PFNLINNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGN 184 (332)
T ss_pred --CCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCHHHHHHHHCCCC
T ss_conf --743332588888458989899941817201348999999999960526979999641356514663435777640798
Q ss_pred E-EEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9-997001200176651--5445677888765411445778312320011232103347864466644889999999986
Q gi|254780153|r 186 V-VTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLW 262 (391)
Q Consensus 186 v-~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~ 262 (391)
+ +.-+--|.+|. ||+ |.++.+++.++...+...++. .+++++..+ .++
T Consensus 185 liVlRSfSK~~gL-aGlRlGY~i~~~~~i~~l~~~~~p~~----------------------v~~~a~~~~----~a~-- 235 (332)
T PRK06425 185 VIIGRSLTKILGI-PSLRIGYIATDDYNMKISRKITEPWS----------------------VCDPAIDFI----RSI-- 235 (332)
T ss_pred EEEEEEHHHHHHC-CCHHHEHHCCCHHHHHHHHHCCCCCC----------------------CHHHHHHHH----HHH--
T ss_conf 8999200787616-41433331089999999997048987----------------------389999999----996--
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE
Q ss_conf 20103189999999977999999987479716766882003653178-98247310113734567888999998886282
Q gi|254780153|r 263 LKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEI 341 (391)
Q Consensus 263 i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~ 341 (391)
..+.-.+...+...+..+.+++.+...++.... . +.+|.. +++++ ...+...|.++|+
T Consensus 236 -~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~----~~aNFil~~~~~--------------a~~l~~~L~~~gI 294 (332)
T PRK06425 236 -DLDYVAKHSLDIMENERSYLINNLEAMGFRAAG--D----PSANFITFMIPD--------------AHDFYSYLLKNGI 294 (332)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--C----CCCEEEEEECCC--------------HHHHHHHHHHCCE
T ss_conf -319999999999999999999999977797889--9----970489996799--------------9999999996991
Q ss_pred EEC-CCCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 872-665567675-05686158889999999999999999
Q gi|254780153|r 342 AYD-IGSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 342 ~~~-~~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
++. ...++..++ .+||+.+ ++++-++|+++|+..+
T Consensus 295 lVR~~~~~~~l~~~~iRisvg---t~~eN~~ll~aLk~~L 331 (332)
T PRK06425 295 LVRLLDDYECLGEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHHH
T ss_conf 999889989889999999789---9999999999999975
No 251
>TIGR01141 hisC histidinol-phosphate aminotransferase; InterPro: IPR005861 The biosynthesis of histidine is a central metabolic process in organisms ranging from bacteria to yeast and plants. The seventh step in the synthesis of histidine within eubacteria is carried out by a pyridoxal-5'-phosphate (PLP)-dependent l-histidinol phosphate aminotransferase (HisC, 2.6.1.9 from EC). HisC is a dimeric enzyme with a mass of approximately 80 kDa. Like most PLP-dependent enzymes, each HisC monomer consists of two domains, a larger PLP-binding domain having an alpha/beta/alpha topology, and a smaller domain. An N-terminal arm contributes to the dimerization of the two monomers . ; GO: 0004400 histidinol-phosphate transaminase activity, 0000105 histidine biosynthetic process.
Probab=98.88 E-value=3.9e-06 Score=58.43 Aligned_cols=297 Identities=18% Similarity=0.194 Sum_probs=190.1
Q ss_pred HHHHHHHHHHH----CCCCCCCCHHHHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEE
Q ss_conf 68999986321----036532898899999999999999968--89985799974873489998753205789-707997
Q gi|254780153|r 25 PGWSLGILEGA----LLGRSHRCVLGKERINKAIQLTRKVLE--VPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLA 97 (391)
Q Consensus 25 p~~v~~~~~~~----~l~~sHRs~~f~~i~~~~~~~l~~l~~--~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~ 97 (391)
|+.+++++... -| ||=|+=. ..+.++.|.+.++ ...+ .|++.--|+=...+.++..+++|| +.++..
T Consensus 43 ~~~~~~~~~~~l~~a~l---~RYPdp~--~~~L~~~lA~~~~~~v~~e-qi~~GGnGsDe~I~~l~raf~~PGk~~~l~~ 116 (377)
T TIGR01141 43 PEKAKEALRAELKEAKL---HRYPDPD--PAELKQALAKYLGKKVDPE-QILLGGNGSDEIIDLLIRAFLEPGKDAVLVP 116 (377)
T ss_pred CHHHHHHHHHHHHHCCC---CCCCCCC--HHHHHHHHHHHHCCCCCCC-CEEEECCCHHHHHHHHHHHHCCCCCCEEEEC
T ss_conf 88999999999850878---6798986--6899999999828898714-0378415606899999998527665457761
Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEE-CCC--CC--CCCHH--H-CCCCCCEEEEEEECCCCEEECCEEE--ECCC--C-CC
Q ss_conf 073688888765323876306740-577--76--57867--6-7855657997420242022032035--0256--8-61
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFT-APY--GS--LPDFS--K-VDFDRDVVFVWNGTTSGVCVPDVGF--IPES--R-EG 164 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~-~~~--g~--~~~~~--~-~~~~~~v~~~h~ETstGv~~~~~~~--~~~~--~-~~ 164 (391)
.=.|+. ....++..+..+.... ..+ ++ ..+.. . .+..+.|++|.=..-||...+..++ ++.. . ++
T Consensus 117 ~Pty~m--Y~~~A~~~g~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~kLvF~c~PNNPTG~~~~~~~i~~~l~~~~~g~~ 194 (377)
T TIGR01141 117 PPTYSM--YEISAKIHGAEVKKVPLDEDADGQLDLEDILVAAIDEKPKLVFLCSPNNPTGNLLSREDIEAVLERTPEGDA 194 (377)
T ss_pred CCCHHH--HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf 775003--676553207147997405676675553789999862694089987886886752698999999971769973
Q ss_pred EEEEEECC-HHHHC--CCCCC----CC-EEEEE-CCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 48864011-01102--54556----85-79997-00120017665--154456778887654114457783123200112
Q gi|254780153|r 165 LVICDATS-AVFAR--HIDFN----KL-DVVTF-SAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 165 llivD~vS-s~g~~--p~d~~----~i-Dv~~a-~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
++|||=-= -|... ..++. ++ ++++. +--|++|+ +| +|+.+.+++.++.+.+.+.+
T Consensus 195 lVV~DEAY~EF~~~~~~~~~~~ll~~ypNL~vlRTlSKafgL-AG~R~Gy~~a~~~~i~~l~kvr~P------------- 260 (377)
T TIGR01141 195 LVVVDEAYGEFSGEEDEPSVLPLLAEYPNLIVLRTLSKAFGL-AGLRVGYAIANAEIIDALNKVRAP------------- 260 (377)
T ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHCCCEEEEHHHHHHHHH-HHHHHHHHCCCHHHHHHHHHCCCC-------------
T ss_conf 899864234578886776532314207987998106788778-888898860699999999851688-------------
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEE
Q ss_conf 3210334786446664488999999998620103--189999999977999999987479716-7668820036531789
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG--GLSACVERCNANAAVLFQFIQENDWIE-NLAVDETTRSNTSICM 310 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g--Gl~~~~~r~~~~a~~l~~~i~~~~~~~-~~~~~~~~rS~~~v~~ 310 (391)
|--+....-+...+|+ +.. =+++..++..+..+++++.+.+..++. -+ .|.+|-.+
T Consensus 261 ------------fn~~~la~~~A~aAL~---~~~~~~~~~~~~~~~~~Re~l~~~L~~~~~~~~v~------~S~aNF~L 319 (377)
T TIGR01141 261 ------------FNLSRLAQAAAIAALR---DDDLQFIEKTVEEINAERERLYDELKKLEGLEDVY------PSDANFVL 319 (377)
T ss_pred ------------CCCCHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE------CCCCCEEE
T ss_conf ------------7889799999998527---14679999999999989999999987143000142------57763799
Q ss_pred E-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEC-CCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8-247310113734567888999998886282872-6655-67675056861588899999999999999
Q gi|254780153|r 311 K-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYD-IGSY-RDAPLGLRVWVGVTVEKEDLLLLCDWLRW 377 (391)
Q Consensus 311 ~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~-r~~~~~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391)
. ++.... ..+.+.+.|.++|+++. .+.+ ....+.+||++| ++|+.++++++|+.
T Consensus 320 ~~~~~~~~----------~a~~~~~~L~~~GiivR~~~~~~Gl~~~~lRITvG---t~eEn~~~l~~l~e 376 (377)
T TIGR01141 320 IRFPRGGL----------DAEALFEALLEKGIIVRDLNSFPGLLPNCLRITVG---TREENDRFLEALRE 376 (377)
T ss_pred EECCCCCC----------CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEC---CHHHHHHHHHHHHC
T ss_conf 96277677----------77999999986780686065578877762689728---87999999999850
No 252
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.88 E-value=8.2e-07 Score=62.69 Aligned_cols=296 Identities=12% Similarity=0.019 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHCCCCCEEEEE-C-----
Q ss_conf 99999999999688998579997487348999875320578970799707-3688888765323876306740-5-----
Q gi|254780153|r 50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE-SFGLGWMSDIRQLSLQDVREFT-A----- 122 (391)
Q Consensus 50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g-~~~~r~~~~~~~~~~~~~~~~~-~----- 122 (391)
+++-.+.|.++++.- ++=.+.|+..+=.+++..|.++|+.+++... .+...- ++.+.+.++..+- .
T Consensus 63 I~~F~~dlaeFlg~D----~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyv---AAEragl~v~eVp~tg~Pey 135 (382)
T COG1103 63 IKDFLEDLAEFLGMD----EVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV---AAERAGLNVAEVPNTGYPEY 135 (382)
T ss_pred HHHHHHHHHHHHCCC----EEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHH---HHHHCCCEEEECCCCCCCCE
T ss_conf 888999889871986----34423651256799999751589889974742278899---99863975896678999845
Q ss_pred ---CCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--EECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEEC
Q ss_conf ---7776578676785-----565799742024202203203--50256861488640110110254556--85799970
Q gi|254780153|r 123 ---PYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--FIPESREGLVICDATSAVFARHIDFN--KLDVVTFS 190 (391)
Q Consensus 123 ---~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--~~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~ 190 (391)
+.+.....+++.. .....+||.+-+.|-+.+... .+|+++++++++.|.=+.|-+|+.-. +.|.+++|
T Consensus 136 ~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgS 215 (382)
T COG1103 136 KITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGS 215 (382)
T ss_pred EECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCEEEEC
T ss_conf 76688889999999862489844899963577757722167899999872995685121022321136655678779724
Q ss_pred CHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 0120017665154456778887654114457783123200112321033478644-666448899999999862010318
Q gi|254780153|r 191 AQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETI-NTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 191 sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
.+|.+...+-++++.+|++.-++.-......+ . . +.. ...|-|. .-|-+.++.-+-.+.+.+
T Consensus 216 GHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~-------~-~-KEv--ellGCT~rGapivTlmASfP~V~eRV------ 278 (382)
T COG1103 216 GHKSMAASAPIGVLAMSEEWAEIVLRRSGRAF-------P-K-KEV--ELLGCTVRGAPIVTLMASFPHVVERV------ 278 (382)
T ss_pred CCCCHHCCCCEEEEEEHHHHHHHHHHHCCCCC-------C-C-CEE--EEECCCCCCCHHHHHHHCCHHHHHHH------
T ss_conf 85300114870477513677789986315446-------5-3-325--66143246843899874077999999------
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCC
Q ss_conf 99999999779999999874797167668820036531789824731011373456788899999888628287266556
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYR 349 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r 349 (391)
++|..--++++.+-+.+++.+++..+-..|.. ....++..|.+..+...+..+.. =+..-|.+.| +.++.+..
T Consensus 279 -krWdeEv~kaR~fv~elEkigg~~qlG~rPk~----HdLm~Fetp~f~eIakk~~r~gy-FlY~ELK~Rg-I~GI~~G~ 351 (382)
T COG1103 279 -KRWDEEVEKARWFVAELEKIGGVKQLGERPKN----HDLMKFETPVFHEIAKKHKRKGY-FLYEELKKRG-IHGIQPGQ 351 (382)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCEEEECCCHHHHHHHHCCCCCE-EEHHHHHHCC-CCCCCCCC
T ss_conf -87889999999999999974308871779765----64255337128999875767854-6689887658-66506675
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 767505686158889999999999999999
Q gi|254780153|r 350 DAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 350 ~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
.+.|..++|| .+.|.|+..+++.+.-.
T Consensus 352 --Tk~~K~svyG-l~~Eqve~V~~afkeI~ 378 (382)
T COG1103 352 --TKYFKLSVYG-LSWEQVEYVVDAFKEIA 378 (382)
T ss_pred --EEEEEEEEEC-CCHHHHHHHHHHHHHHH
T ss_conf --1378887505-77999999999999999
No 253
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.88 E-value=6e-06 Score=57.22 Aligned_cols=300 Identities=14% Similarity=0.122 Sum_probs=163.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---------CCC-C
Q ss_conf 96899998632103653289889-999999999999996889985799974873489998753205---------789-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---------GYR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---------~~~-~ 92 (391)
+|+ |.+++.+++-...|-+..| .+...+..+++.++.+. + .++| ..||+.++|+++.=.. .++ .
T Consensus 58 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~~e~l~~l~~~--~-~v~f-~~sGseAvE~AlklAr~~~~~~~~~~~~r~ 132 (396)
T PRK04073 58 HPK-IIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--D-MVLP-MNTGAEAVETAIKAARRWAYDVKGVEPNKA 132 (396)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--C-EEEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 799-9999999984178766532434789999999975283--6-4896-187888999999999999876237888987
Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCE---------EEEECCCCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC----
Q ss_conf 0799707368888876532387630---------67405777657867678--556579974202420---22032----
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDV---------REFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD---- 154 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~---- 154 (391)
.++...++|-++...-..--+.... .....|++ +++.++ ..++++.+-.|...| +..|.
T Consensus 133 ~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~~p~~---d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl 209 (396)
T PRK04073 133 EIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKKIPYG---DVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFL 209 (396)
T ss_pred EEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCC---HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHH
T ss_conf 799977750045320522267643345778999982325752---16678861489756999989877789778998999
Q ss_pred --EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf --0350256861488640110-110--254--5568579997001200176-6515445677888765411445778312
Q gi|254780153|r 155 --VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 155 --~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
...+|+++++++|+|=|.+ ||- .-+ +..++.=.+...-|+|++= -=++.++.+++..+... +
T Consensus 210 ~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~gG~~P~~av~~~~~i~~~~~---~------- 279 (396)
T PRK04073 210 KAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVKPDMYILGKALGGGVFPISCVAANRDILGVFT---P------- 279 (396)
T ss_pred HHHHHHHHHHCCEEECCCCEECCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHCC---C-------
T ss_conf 999999998399352663410788657630010046898801025345578776058960789996166---8-------
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391)
...++|+.-=| ....+..++|+.++++ + ..+|.+++.+.+.+.+++.. .+.+. +.|+..
T Consensus 280 ------------~~h~~T~~gnp-la~aaa~a~L~~~~~~-~---l~~~~~~~g~~l~~~L~~l~--~~~i~--~vRG~G 338 (396)
T PRK04073 280 ------------GSHGSTFGGNP-LACAVSIAALDVIEEE-K---LPERSLELGEYFKEQLKEID--NPMIK--EVRGRG 338 (396)
T ss_pred ------------CCCCCCCCCCH-HHHHHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHHHCC--CCCEE--ECCCCE
T ss_conf ------------99760548898-9999999999999875-7---99999999999999998258--99748--723377
Q ss_pred EEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 178-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 307 SIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 307 ~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
... +.+.++ .+.+...+.++|.++... -+..+|+.--=.+++++++.+++.||.++
T Consensus 339 l~~giel~~~-------------~~~~~~~~~~~Gll~~~~----~~~~ir~~PpL~it~~eid~~l~~l~~~L 395 (396)
T PRK04073 339 LFIGVELNEP-------------ARPYCEALKEEGLLCKET----HETVIRFAPPLVISKEELDWALEKIKAVL 395 (396)
T ss_pred EEEEEEECCC-------------HHHHHHHHHHCCEEEEEC----CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999995875-------------899999999499799527----99989997993689999999999999985
No 254
>PRK08555 consensus
Probab=98.85 E-value=5.6e-06 Score=57.37 Aligned_cols=313 Identities=14% Similarity=0.082 Sum_probs=155.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-CC-CEEEEEEC
Q ss_conf 968999986321036532898--899999999999999968899857999748734899987532057-89-70799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-YR-GVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~~-~~~~~~~g 99 (391)
+|+ |.+++.+++=...|.+. -..+...+.-+.|.+++.-..+..| ++..||+.++|+++.=... .+ ...+...+
T Consensus 70 ~p~-i~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v-~f~~SGSEAvE~AiklAr~~tgr~~ii~~~~ 147 (443)
T PRK08555 70 HPR-VIEAVEEQLHKLWHAAGTDFYNEYQVELAKKLVEIAPGDFEKKV-FFSNSGTEANEAALKIAKWYTGRKMFIAFIG 147 (443)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE-EEECCHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 799-99999999861767465643688999999999985775656559-9808778899999999887379988999958
Q ss_pred C-HHHHHHHHHH-------HCC-C---CCEEEEE------CCCCCC--CCH--------HHCC--------CCCCEEEEE
Q ss_conf 3-6888887653-------238-7---6306740------577765--786--------7678--------556579974
Q gi|254780153|r 100 S-FGLGWMSDIR-------QLS-L---QDVREFT------APYGSL--PDF--------SKVD--------FDRDVVFVW 143 (391)
Q Consensus 100 ~-~~~r~~~~~~-------~~~-~---~~~~~~~------~~~g~~--~~~--------~~~~--------~~~~v~~~h 143 (391)
+ .|........ +.+ + ..+..+. .+++.. ... +.++ ....++.+-
T Consensus 148 ~yHG~t~g~~s~t~~~~~~~~~~~p~~~~~~~vp~p~~~r~p~~~~~~~~~~~~~~~~~~~ie~~i~~~~~~~~~iAavi 227 (443)
T PRK08555 148 AFHGRTQGSLSLTASKPVQRSGFFPTMPGVEHVPYPNPYRNPWGIDGYENPDELVNRVIDYIEEYLFEHYVPPEEVAGIF 227 (443)
T ss_pred CCCCCCCCCEEEECCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 70789721168725850110477899999368168862246445666569999999999999999986257989889999
Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCC--EEEEECCHHCCCCCCC--CEEEE
Q ss_conf 202420---22032------0350256861488640110-110--254--55685--7999700120017665--15445
Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKL--DVVTFSAQKVLGGEAG--FGIII 205 (391)
Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~ 205 (391)
.|...| +..|. ...+|+++++++|+|=|.+ ||- ..+ +.+++ |++ .-.|+|++ | ++.++
T Consensus 228 ~EPi~g~gG~~~pp~~yl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gKgl~~--G~Pl~av~ 303 (443)
T PRK08555 228 FEPIQGEGGYVVPPKNFFKELKKLADKYGILLIDDEVQMGLGRTGKMFAIEHFGVEPDII--TLAKALGG--GIPIGATI 303 (443)
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEECCCCCCCCEE--EECCCCCC--CCCEEEEE
T ss_conf 958768889875887887899999997494696354412787024741231688899889--97742448--87508999
Q ss_pred ECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 67788876541144577831232001123210334786446664488999999998620103189999999977999999
Q gi|254780153|r 206 LSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQ 285 (391)
Q Consensus 206 ~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~ 285 (391)
++++. . . .. ....++|+..-|+. ..+...+|+.++ ++ ...+.+++.+.+.+
T Consensus 304 ~~~e~-~---~-~~------------------~~~h~~T~~gnpla-~aaa~a~L~~i~-e~----l~~~~~~~g~~l~~ 354 (443)
T PRK08555 304 FRADL-D---F-KK------------------PGLHSNTFGGNALA-SAAGLAVIEEIK-EG----LLENVQKLGKYFRE 354 (443)
T ss_pred EHHHH-C---C-CC------------------CCCCCCCCCCCHHH-HHHHHHHHHHHH-HH----HHHHHHHHHHHHHH
T ss_conf 82453-5---5-77------------------77737688854899-999999999999-77----99999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCEE-EEEE-CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCC
Q ss_conf 98747971676688200365317-8982-473101137345678889999988862828726655676750568615888
Q gi|254780153|r 286 FIQENDWIENLAVDETTRSNTSI-CMKI-VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTV 363 (391)
Q Consensus 286 ~i~~~~~~~~~~~~~~~rS~~~v-~~~~-~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i 363 (391)
.+.++.--.+.+.+ .|..... .+.+ .|...... .......+.....++|.++...+ +..+|+.--=.+
T Consensus 355 ~L~~l~~~~~~v~d--vRG~Gl~~gielv~~~~~~~~----~~~~~~~i~~~~~~~Gll~~~~g----~n~ir~~PPL~i 424 (443)
T PRK08555 355 RLEELKEKYEIIGD--VRGLGLAWAIEFVKDRKTKEP----NPKLRDRVVVEAFKRGLILLGCG----KSAIRLIPPLII 424 (443)
T ss_pred HHHHHHHCCCCEEE--ECCCCEEEEEEEECCCCCCCC----CHHHHHHHHHHHHHCCEEEEECC----CCEEEEECCCCC
T ss_conf 99998861997787--232667999998237765677----98999999999997890997379----998999779438
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999
Q gi|254780153|r 364 EKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 364 ~~~dv~~L~~aLe~~~~~ 381 (391)
+.+||+.+++.||.++++
T Consensus 425 t~~eid~~~~~l~~al~~ 442 (443)
T PRK08555 425 SEEEAKIGLEILEEAIKV 442 (443)
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999963
No 255
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=98.84 E-value=3e-06 Score=59.09 Aligned_cols=218 Identities=14% Similarity=0.057 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEE---C
Q ss_conf 999999999999996889985799974873489998753205789707997-073688888765323876306740---5
Q gi|254780153|r 47 KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFT---A 122 (391)
Q Consensus 47 ~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~---~ 122 (391)
..++++++++..++|+.. +.+|+.+|.|.++-++++.++++|+++++. |..-|- -.+....+...+.+. .
T Consensus 65 ~g~I~eAq~~aA~~fga~---~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv~RN~HkSv---~~al~l~g~~Pvyl~p~~~ 138 (417)
T pfam01276 65 SGPIKEAQKYAARVFGAD---KSYFVVNGTSGANKTVGMAVCTPGDTVLIDRNCHKSI---HHALMMSGATPVYLEPTRN 138 (417)
T ss_pred CHHHHHHHHHHHHHHCCC---CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHH---HHHHHHCCCEEEEECCCCC
T ss_conf 639999999999983999---3699846830999999997438999899716418999---9999986985899536424
Q ss_pred CCCCC--CCH------------HHCCCCCC--EEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH--HHHCCCCC-
Q ss_conf 77765--786------------76785565--7997420242022032035--0256861488640110--11025455-
Q gi|254780153|r 123 PYGSL--PDF------------SKVDFDRD--VVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA--VFARHIDF- 181 (391)
Q Consensus 123 ~~g~~--~~~------------~~~~~~~~--v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs--~g~~p~d~- 181 (391)
++|.. .++ ++.+..+. ++++-+-|=.|+..++..+ +++.++.+++||.-=. ++=.|+..
T Consensus 139 ~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~plp~~ 218 (417)
T pfam01276 139 AYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTYDGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIPIYAD 218 (417)
T ss_pred CCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHH
T ss_conf 34661588825459999999998587656850899989998706528999999986339879997887520246878334
Q ss_pred ---CCCE-------EEEECCHHCCCCCCCCEEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCH
Q ss_conf ---6857-------9997001200176651544567788-8765411445778312320011232103347864466644
Q gi|254780153|r 182 ---NKLD-------VVTFSAQKVLGGEAGFGIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSL 250 (391)
Q Consensus 182 ---~~iD-------v~~a~sQK~l~~ppGl~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v 250 (391)
-+.| +++-|.+|-|++-..-+++-++... +++ .. +...... .|| -.|+-
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~-----------~~--~~~~l~~------~qT-TSPsY 278 (417)
T pfam01276 219 ASPMGGDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNH-----------KR--FNEAFMM------HTS-TSPFY 278 (417)
T ss_pred HHHCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCH-----------HH--HHHHHHH------HCC-CCHHH
T ss_conf 6656788666772279861111354304343212167877899-----------99--9999997------738-87489
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 88999999998620103189999999977999999987479
Q gi|254780153|r 251 LCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND 291 (391)
Q Consensus 251 ~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~ 291 (391)
.++.-+..+-.+++.++|- ..+.+.-+.+..+++.+.+..
T Consensus 279 ~lmASLD~ar~~m~~~~G~-~l~~~~i~~a~~~R~~i~~l~ 318 (417)
T pfam01276 279 PIVASLDVAAAMMEGNSGR-RLWQESLERAIEFRKEIKTLN 318 (417)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999997535549-999999999999999998645
No 256
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.82 E-value=1.4e-05 Score=54.90 Aligned_cols=296 Identities=14% Similarity=0.055 Sum_probs=149.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--------CC------CCEEEEEECCHHHHHH
Q ss_conf 289889999999999999996889985799974873489998753205--------78------9707997073688888
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--------GY------RGVDVLAWESFGLGWM 106 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--------~~------~~~~~~~~g~~~~r~~ 106 (391)
|-+.-+..-..+..+.+.+++..+.-.+| |+..|||.++|+++-=.. .+ +.+++...++|=++..
T Consensus 94 ~~~~~~~~~~~~l~~~l~~~~~~~~l~~v-ff~nsGSEAvE~AlKlA~~~~~r~~~~~g~~~~~~~kii~~~~sYHG~T~ 172 (449)
T PRK08297 94 SNSDVYTVAMARFVDTFARVLGDPALPHL-FFVDGGALAVENALKVAFDWKSRHNEAHGIDPALGTRVLHLRGAFHGRSG 172 (449)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEE-EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCH
T ss_conf 65236669999999999986188777758-86187689999999999998654300236777677569996365379607
Q ss_pred HHHHHCCC----------CCEEEEECCCCCC----CC--------HHHC----C-CCCCEEEEEEECCCCE---EECC--
Q ss_conf 76532387----------6306740577765----78--------6767----8-5565799742024202---2032--
Q gi|254780153|r 107 SDIRQLSL----------QDVREFTAPYGSL----PD--------FSKV----D-FDRDVVFVWNGTTSGV---CVPD-- 154 (391)
Q Consensus 107 ~~~~~~~~----------~~~~~~~~~~g~~----~~--------~~~~----~-~~~~v~~~h~ETstGv---~~~~-- 154 (391)
.-..-.+. .+......|+... .. ++++ + ....++.+-.|...|. ..+.
T Consensus 173 gals~tg~~~~~~~~~p~~~~~~~~~P~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvIvEPIqG~gG~~~~p~~ 252 (449)
T PRK08297 173 YTLSLTNTDPVKTARFPKFDWPRIDAPYVRPGLDADAVAALEAEALRQARAAFEAHPHDIACFIAEPIQGEGGDRHFRPE 252 (449)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHH
T ss_conf 77886179853357888888877889987789873016678999999999999858997799999678747799889989
Q ss_pred ----EEEECCCCCCEEEEEECCHHHHCCCCC-----CCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf ----035025686148864011011025455-----685--799970012001766515445677888765411445778
Q gi|254780153|r 155 ----VGFIPESREGLVICDATSAVFARHIDF-----NKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL 223 (391)
Q Consensus 155 ----~~~~~~~~~~llivD~vSs~g~~p~d~-----~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~ 223 (391)
.+.+|+++++++|+|=|.+=.++-=.| .++ |++ ..-|+|+ .| .+..+....+....
T Consensus 253 yl~~lr~lc~~~giLLI~DEVqtGfGRTG~~fa~e~~gv~PDii--t~~Kgl~--~G--~~~~~~~~~~~~~~------- 319 (449)
T PRK08297 253 FFAAMRALCDEHDALLIFDEVQTGCGLTGTAWAYQQLGVAPDVV--AFGKKTQ--VC--GVMAGRRVDEVADN------- 319 (449)
T ss_pred HHHHHHHHHHHCCCEEECCCCEECCCCCCCHHHCCCCCCCCCEE--EECCCCC--CC--CHHHHHHHHHHHHH-------
T ss_conf 99999999997188454452202787676513313358999889--8776334--55--07788999999988-------
Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCC
Q ss_conf 312320011232103347864466644889999999986201031899999999779999999874797167-6688200
Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVDETT 302 (391)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~~~~ 302 (391)
.+. .....++|+.--|+ ...+..++|+.+++++ ..+|.+++.+.+.+.++...--.+ ++. +.
T Consensus 320 --~~~--------~~~~~~sTf~Gnp~-acaaala~L~ii~~e~----l~~~~~~~g~~l~~~L~~l~~~~p~ii~--dV 382 (449)
T PRK08297 320 --VFA--------VSSRINSTWGGNLT-DMVRARRILEVIEAEG----LFDRARQQGAYLLARLDELAAEFPAVVL--DP 382 (449)
T ss_pred --HHC--------CCCCCCCCCCCCHH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCEE--EE
T ss_conf --641--------68777888898889-9999999999984304----9999999999999999999976898446--53
Q ss_pred CCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 365317-8982473101137345678889999988862828726655676750568615888999999999999999999
Q gi|254780153|r 303 RSNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 303 rS~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
|..... .+.++++.. ...+...+.++|+++...+ .+.+|+.--=.++.++++.+++.|+.++++
T Consensus 383 RG~GLm~giel~~~~~-----------~~~~~~~~~~~Gll~~~~g----~~~irl~PPL~it~~eid~~~~~l~~al~e 447 (449)
T PRK08297 383 RGRGLMCAFSLPTTAD-----------RDELIRRLWRERVILLPAG----EDSVRFRPALTVSRAEIDAAVDAVRRVLRT 447 (449)
T ss_pred EECCEEEEEECCCHHH-----------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 1156899998288678-----------9999999997895897579----997999899128899999999999999998
Q ss_pred H
Q ss_conf 9
Q gi|254780153|r 382 Q 382 (391)
Q Consensus 382 ~ 382 (391)
.
T Consensus 448 l 448 (449)
T PRK08297 448 L 448 (449)
T ss_pred H
T ss_conf 6
No 257
>PRK07778 consensus
Probab=98.80 E-value=1.6e-05 Score=54.44 Aligned_cols=321 Identities=13% Similarity=0.070 Sum_probs=165.9
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 88868887768-96899998632103----65328988999999999999999688998579997487348999875320
Q gi|254780153|r 13 RPFFSSGPCAK-RPGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL 87 (391)
Q Consensus 13 ~~~F~pGP~~~-~p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl 87 (391)
-.+|+-|=-.. .|..+++++.+.+- ++++ +.=-.++-+.+-+.+++.++.+=+-+=++++.|++.++..++..+
T Consensus 32 vi~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~Y~~-~~G~p~LR~aia~~~~~~~g~~~~pe~I~vt~Ga~~al~~~~~~l 110 (386)
T PRK07778 32 LVNLSAGQPSAGAPEPVRAAAAAALHRNQLGYTV-ALGIPELREAIAADYQRRHGITVEPDDVVVTTGSSGGFLLAFLAC 110 (386)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHH
T ss_conf 0788598999986899999999986349999899-978499999999999998689988554898178799999999996
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCC----CCCCEEEEEEECCCCEEECCEE-----
Q ss_conf 5789707997073688888765323876306740--5777657867678----5565799742024202203203-----
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVD----FDRDVVFVWNGTTSGVCVPDVG----- 156 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~----~~~~v~~~h~ETstGv~~~~~~----- 156 (391)
+++||.+++-+=.|-.- ...+...+ ..+..+. .+.+..++.+.++ ..+.+.++.=..-||...+..+
T Consensus 111 ~~pGD~Vlv~~P~Y~~y-~~~~~~~g-~~~v~vp~~~~~~~~~~~~~l~~~~~~~k~iil~~P~NPTG~v~s~~~l~~l~ 188 (386)
T PRK07778 111 FDVGDRVAMASPGYPCY-RNILSALG-CEVVEIPCGPDTRFQPTAAMLAELDPPVRGVIVASPANPTGTVIAPEELAAIA 188 (386)
T ss_pred CCCCCEEEECCCCCCCH-HHHHHHCC-CEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf 49999899867865107-99999739-82572367744566723889862586643999899989887785079999999
Q ss_pred EECCCCCCEEEEEECCHH---HHCCC-----CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf 502568614886401101---10254-----5568579997001200176651--5445677888765411445778312
Q gi|254780153|r 157 FIPESREGLVICDATSAV---FARHI-----DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 157 ~~~~~~~~llivD~vSs~---g~~p~-----d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
.+|.+++..+|.|-+=+- .+.+. +..+--+++.|.-|.++ .||+ |.++..++.++......
T Consensus 189 ~la~~~~i~iisDEiY~~l~~~~~~~~~~~~~~~~~~i~i~S~SK~~~-~~G~RiG~~~~p~~l~~~~~~~~-------- 259 (386)
T PRK07778 189 SWCEASGVRLISDEVYHGLVYEGAPPTSCAWETSREAVVVNSFSKYYA-MTGWRLGWLLVPTELRRAVDRLT-------- 259 (386)
T ss_pred HHHHHCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCC-CCCCEEEEEEECHHHHHHHHHHH--------
T ss_conf 998537879994343253115899986430024786899930431125-67760699984899999999998--------
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391)
..+...+|+..-++...++..- ...-++...++++++.+.+.+.+.+.+.......+ +..
T Consensus 260 ---------------~~~~~~~~~~~Q~aa~~al~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~p~~----G~f 319 (386)
T PRK07778 260 ---------------GNFTICPPALSQYAAVAAFTPE-ATAEADGHLAHYAENRRLLLDGLRALGITRLAPAD----GAF 319 (386)
T ss_pred ---------------HCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC----EEE
T ss_conf ---------------5076787789999999995601-28999999999999999999999975995417998----478
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 17898247310113734567888999998886282872665--5676750-5686158889999999999999
Q gi|254780153|r 307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
-+-..+++.. .+ ...+. ..++.+.|+++--|. +...+.+ +|++... ++++++.-++-|+
T Consensus 320 y~~~~~~~~~---~d---~~~f~---~~Ll~~~gV~v~PG~~Fg~~~g~~~vRlsf~~--~~~~l~eal~RL~ 381 (386)
T PRK07778 320 YVYADVSHLT---DD---SLAFC---SKLLADTGVAIAPGIDFDTVRGNSFVRLSFAG--PTADIEEALRRIG 381 (386)
T ss_pred EEEEECCCCC---CC---HHHHH---HHHHHHCCEEEECCCCCCCCCCCCEEEEEEEC--CHHHHHHHHHHHH
T ss_conf 9978898889---99---99999---99998399999758566889999969999839--8999999999999
No 258
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative; InterPro: IPR010962 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry contains a number of enzyme families: Serine palmitoyltransferase Glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 5-aminolevulinic acid synthase 8-amino-7-oxononanoate synthase All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.; GO: 0016740 transferase activity, 0030170 pyridoxal phosphate binding.
Probab=98.79 E-value=6.6e-06 Score=56.93 Aligned_cols=310 Identities=16% Similarity=0.129 Sum_probs=198.8
Q ss_pred CHHHHHHHHHHHCCCC-----CCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 9689999863210365-----3289-889999999999999996889985799974873489998753205789707997
Q gi|254780153|r 24 RPGWSLGILEGALLGR-----SHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~-----sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
+|. ..+++++.+..+ +=|+ .=-.++.+|..+.|.+|=++.. .+++| ||=..+-+++..+++++|-.+++
T Consensus 49 hp~-Lk~aA~~a~~~yGvGAGAVRTIaGTl~lH~eLE~~LA~FK~teA---Al~fq-SGF~~N~GvlSa~L~k~ddG~v~ 123 (392)
T TIGR01825 49 HPR-LKEAAKEAIQQYGVGAGAVRTIAGTLELHEELEEKLAKFKKTEA---ALVFQ-SGFNTNQGVLSALLRKGDDGIVL 123 (392)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE---EEHHH-CCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 876-89999999986596224121043377899999999875538201---10103-12237799998762358871587
Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC---CC-EEEEE-EECCCCEEECCEEE--ECCCCCCEE
Q ss_conf 073688888765323876306740577765786767----855---65-79974-20242022032035--025686148
Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD---RD-VVFVW-NGTTSGVCVPDVGF--IPESREGLV 166 (391)
Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~---~~-v~~~h-~ETstGv~~~~~~~--~~~~~~~ll 166 (391)
+..-=.--.-+-.|.-.+.-.++.= -...|++.. ... .. ..+|- +=+--|=.-|+-++ ++..+++++
T Consensus 124 SdELNHASIIDG~RLtkA~k~~y~H--~dm~DL~~~l~e~~~~Gqy~~~l~vTDGVFSMDGdvApLp~iVE~Ae~Yda~~ 201 (392)
T TIGR01825 124 SDELNHASIIDGLRLTKAKKKIYKH--VDMDDLERVLRENVEEGQYKKKLIVTDGVFSMDGDVAPLPEIVELAEKYDALV 201 (392)
T ss_pred ECCCCHHHHHHCCCCCCCCEEEEEC--CCHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCCCCHHHHHHHHCCCEE
T ss_conf 2000203455042237885689845--98458999997160337544368996650425678788732334632459579
Q ss_pred EEEEC--CHHHH------C-CC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf 86401--10110------2-54--55685799970012001766515445677888765411445778312320011232
Q gi|254780153|r 167 ICDAT--SAVFA------R-HI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 167 ivD~v--Ss~g~------~-p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
.||=- |...+ . .| +.+++|+=+..--|++|+..| -++-+++++|-+... .+ |..
T Consensus 202 yVDDAHGsGVlGe~GrGtV~HFGL~y~~v~~qvGTLSKA~GvvGG--Y~AG~~~lidyL~~~--aR--PFL--------- 266 (392)
T TIGR01825 202 YVDDAHGSGVLGEKGRGTVKHFGLEYDKVDIQVGTLSKAIGVVGG--YVAGSKELIDYLKAR--AR--PFL--------- 266 (392)
T ss_pred EEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHCCCCC--CCCCCHHHHHHHHHC--CC--CCC---------
T ss_conf 986334664447788713530375416467885552232225664--234888999999862--89--860---------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391)
.||-.-|| .+-|+.+|++.+.++ +...+|=+.|++.+...|.++++ ... .|.+-+|..+-
T Consensus 267 ------FSta~~Pa--~~~A~~~Av~~l~~~---~~l~~kLW~Nt~ylk~~L~~LGy-dl~------~S~tPItPv~~-- 326 (392)
T TIGR01825 267 ------FSTALPPA--VVAALIEAVDVLQES---PELMEKLWDNTRYLKAGLSKLGY-DLG------ESETPITPVLI-- 326 (392)
T ss_pred ------CCCCCCHH--HHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHCC-CCC------CCCCCCCCEEE--
T ss_conf ------12578807--899999999987079---31477767889999987676164-114------76686124587--
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCE-EEEECCC--CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 101137345678889999988862-828726655676750-5686158--8899999999999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLG-LRVWVGV--TVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~-~RIg~~g--~i~~~dv~~L~~aLe~~~~~~k 383 (391)
.+++..+.+..+|.++ |+....=.|+++++| =||=++. +.|.+|++..++|.|.+-++.+
T Consensus 327 --------Gde~~A~efS~rL~~~yGvFa~sivFPTVp~g~ARiR~~~tA~HTkd~L~~al~aye~~Gk~l~ 390 (392)
T TIGR01825 327 --------GDEKVAQEFSRRLLDEYGVFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG 390 (392)
T ss_pred --------CCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHC
T ss_conf --------6515689999987775290899842165669884212465613026679999999998678725
No 259
>PRK08354 putative aminotransferase; Provisional
Probab=98.74 E-value=2.4e-05 Score=53.39 Aligned_cols=275 Identities=15% Similarity=0.066 Sum_probs=138.9
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH
Q ss_conf 89999863210365328988999999999999999688998579997487348999875320578970799707368888
Q gi|254780153|r 26 GWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW 105 (391)
Q Consensus 26 ~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~ 105 (391)
..+.+++....- ..+|=|+.. ++++.+.+.++. .+++ ..|++.++..+..-++ +++.+++..=.|+..
T Consensus 23 ~~~~~~~~~~~~-~~~~YP~~~----~L~~~la~~~g~----~i~~-~~Gs~e~i~~l~~~~~-~~~~vl~~~Ptf~~Y- 90 (312)
T PRK08354 23 EWLDEMFERAVE-ISGRYTYYE----WLEEEFSKLFGE----PITI-TAGITEALYLIGILAL-RDRKVIIPRHTYGEY- 90 (312)
T ss_pred HHHHHHHHHHHH-HHCCCCCHH----HHHHHHHHHHCC----CEEE-CCCHHHHHHHHHHHHC-CCCEEEEECCCHHHH-
T ss_conf 299999996056-400499989----999999887687----9699-2679999999999976-989899935999999-
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECCH-HHHCC-
Q ss_conf 8765323876306740577765786767855657997420242022032035-----0256861488640110-11025-
Q gi|254780153|r 106 MSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATSA-VFARH- 178 (391)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs-~g~~p- 178 (391)
..+++..+..+.....+.. ...+.++..+.+.+|.=..-||...+..+. .+..++.++|+|-.=. |...+
T Consensus 91 -~~~a~~~g~~v~~~~~d~~--~l~~~~~~~~~v~l~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY~ef~~~~~ 167 (312)
T PRK08354 91 -ERVARFFAARIIKGPNDPE--KLEELVEKNSVVFFCNPNNPDGKYYNFKELAPLIDAVEDKNVLLILDEAFIDFVKKAE 167 (312)
T ss_pred -HHHHHHCCCEEEECCCCHH--HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCC
T ss_conf -9999986987873599989--9986304898899968989867868989999999864777848997404777367633
Q ss_pred -CCCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf -45568579997001200176651--544567788876541144577831232001123210334786446664488999
Q gi|254780153|r 179 -IDFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIED 255 (391)
Q Consensus 179 -~d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~a 255 (391)
.+..++ ++.-+--|.+|. ||+ |.++.+++++++. ..+ +.-+.....+
T Consensus 168 ~~~~~nl-ivlrS~SK~~gl-aGlRlGy~i~~~e~i~~~---r~p-------------------------~~vn~~a~~~ 217 (312)
T PRK08354 168 SPEGENI-IKLRTFTKSYGV-PGIRVGYVKGFEEAFRSV---RMP-------------------------WGIGSLGYAF 217 (312)
T ss_pred CCCCCCE-EEEEECCHHHCC-CCHHHHHHHCCHHHHHHH---CCC-------------------------CCCCHHHHHH
T ss_conf 4777988-999746264357-404343662789999986---389-------------------------8874999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999862010318999999997799999998747971676688200365317898247310113734567888999998
Q gi|254780153|r 256 YIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 256 l~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
+..+++ + ..+.+.+. .+.++...+....+.. ..|.+|-.+.-. + + ...+...
T Consensus 218 ~~~~l~----d-~~~~~~~~----~~~~~~er~~l~~~~~------~~s~aNFil~~~-~-----~-------a~~~~~~ 269 (312)
T PRK08354 218 LEFLLE----D-NFEHLKKT----LPLIWREKERFEKFLY------VKSDANFFIKDV-G-----D-------AEKFVEF 269 (312)
T ss_pred HHHHHH----H-HHHHHHHH----HHHHHHHHHHHHCCCC------CCCCCCEEEEEC-C-----C-------HHHHHHH
T ss_conf 999988----1-69999999----9999999999956236------899673899877-9-----9-------9999999
Q ss_pred HHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 88628287266556767505686158889999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
|.++|+++.-...-..+..+||+.+ ++++.++|+++|+
T Consensus 270 L~~~gIlVR~~~~fgl~~~iRisvg---~~een~~li~aLk 307 (312)
T PRK08354 270 LKRNGILVRDCTSFGLPGYVRFSVR---DREENEKLLNALR 307 (312)
T ss_pred HHHCCEEEEECCCCCCCCEEEEECC---CHHHHHHHHHHHH
T ss_conf 9839919996899999998999719---9999999999999
No 260
>PRK09265 aminotransferase AlaT; Validated
Probab=98.74 E-value=2.5e-05 Score=53.31 Aligned_cols=324 Identities=14% Similarity=0.096 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 689999863210365328---988999999999999999688998-5799974873489998753205789707997073
Q gi|254780153|r 25 PGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391)
Q Consensus 25 p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391)
|+.+.+++...+=+ .|. +.=..++-+.+-+.+++-++..-+ .+| +++.|++.++..+++.++.+||.+++-.=+
T Consensus 51 P~~i~~a~~~a~~~-~~~Yt~~~G~~eLReaIA~~~~~~~~~~~~p~~I-~vT~Ga~~al~~~~~all~pGDeVlvp~P~ 128 (404)
T PRK09265 51 PDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDI-YIGNGVSELIVMAMQALLNNGDEVLVPAPD 128 (404)
T ss_pred CHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHE-EECCCHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 89999999987444-8998988888999999999999756999888997-875888999999999964998989994688
Q ss_pred HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCEEEEE
Q ss_conf 68888876532387630674-057776578676785-----565799742024202203203-----5025686148864
Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGLVICD 169 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD 169 (391)
|-.. ...+...++..+.+. ....+..+++++++. .+.+.++.=..-||...+... .+|..++..+|.|
T Consensus 129 Yp~Y-~~~~~l~g~~~v~~~~~~~~~f~~d~~~l~~~i~~~tk~iil~nP~NPTG~v~~~~~l~~l~~~a~~~~i~visD 207 (404)
T PRK09265 129 YPLW-TAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFAD 207 (404)
T ss_pred CCHH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEC
T ss_conf 7306-899997698899985263237788999999765745559998689795120025046889999763155899850
Q ss_pred ECCHHH---HCC-C-----CCCCCEEEEECCHHCCCCCCCCEEE--EEC-HHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf 011011---025-4-----5568579997001200176651544--567-788876541144577831232001123210
Q gi|254780153|r 170 ATSAVF---ARH-I-----DFNKLDVVTFSAQKVLGGEAGFGII--ILS-PASVERLEKYVPSWPLPKIFRMVKGGRVME 237 (391)
Q Consensus 170 ~vSs~g---~~p-~-----d~~~iDv~~a~sQK~l~~ppGl~~v--~~s-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
-+=+-. +.+ . ..+..-+.+.|.-|.++ .||+=+- +++ ++...+ . +.. .....
T Consensus 208 EiY~~l~~d~~~~~s~~~l~~~~~~I~~~s~SK~~~-m~G~RiG~~v~~~p~~~~~--~---------~i~---~~~~l- 271 (404)
T PRK09265 208 EIYDKILYDGAEHISIASLAPDLLCVTFNGLSKAYR-VAGFRVGWMVLSGPKKHAK--G---------YIE---GLDML- 271 (404)
T ss_pred CHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCC-CCCCCEEEEEECCCHHHHH--H---------HHH---HHHHH-
T ss_conf 114552369998878788198605999736774556-7755279999529199999--9---------999---99988-
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 33478644666448899999999862010318999999997799999998747971676688200365317898247310
Q gi|254780153|r 238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317 (391)
Q Consensus 238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~ 317 (391)
.++...+++..-++...+|.......-+.....|..++.+.+++.+.+.+++....++-. -..|.--++..
T Consensus 272 ----~~~~~c~~~~~Q~a~~~al~~~~~~~~~~~~~~rl~~~Rd~~~~~L~~i~g~~~~~P~Ga-----fy~f~~l~~~~ 342 (404)
T PRK09265 272 ----ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGA-----LYAFPKLDPKV 342 (404)
T ss_pred ----HHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE-----EEEEEECCCCC
T ss_conf ----540156882899999999738312999999999999999999999973899575689838-----99830877331
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 113734567888999998886282872665--567675056861588899999999999999999999
Q gi|254780153|r 318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
.. ......+ ...+|.++|+++--|. +..-+.-||++. ..++++++.-++-|+.+++.-|
T Consensus 343 ~~--~~d~~~f---~~~Ll~e~gV~v~PG~~Fg~~~~~~vRlsf--~~~~e~l~eal~Rl~~~l~~~r 403 (404)
T PRK09265 343 YP--IHDDEKF---VLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEDAIGRIGRFLSGYR 403 (404)
T ss_pred CC--CCCHHHH---HHHHHHHCCEEEECCCCCCCCCCCEEEEEE--CCCHHHHHHHHHHHHHHHHHHC
T ss_conf 79--9999999---999998699999778502889999899997--9999999999999999999840
No 261
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=98.74 E-value=1.3e-05 Score=55.15 Aligned_cols=307 Identities=18% Similarity=0.166 Sum_probs=190.2
Q ss_pred CHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH-----HCC----CC
Q ss_conf 9689999863210----3653289889999999999999996889985799974873489998753-----205----78
Q gi|254780153|r 24 RPGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW-----SLL----GY 90 (391)
Q Consensus 24 ~p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~-----nl~----~~ 90 (391)
+|. |++||..+. | |=-.-|.+++....+-+.+||+-+-+ .|++|. +|+.+.|+++= ... .+
T Consensus 60 hP~-i~~Al~~Q~~KlTL---~Sraf~nd~lg~~~~~~t~LfgGk~~-~vL~mN-TGaEAvEtA~KLAR~WgY~~K~ip~ 133 (426)
T TIGR01885 60 HPK-IVNALKNQADKLTL---TSRAFHNDVLGEFAKYLTKLFGGKYE-KVLPMN-TGAEAVETALKLARKWGYEVKGIPR 133 (426)
T ss_pred CHH-HHHHHHHHHHHCCC---HHHHHHCCHHHHHHHHHHHHCCCCCC-EEECCC-CCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 716-89999999851371---02766060357899999975499510-560456-8734799999999974413578557
Q ss_pred CC-EEEEEECCHHHHHHHHHHHCCCC----------CE------EEEECCCCCCCCHHHC-CC--C--CCEEEEEEECCC
Q ss_conf 97-07997073688888765323876----------30------6740577765786767-85--5--657997420242
Q gi|254780153|r 91 RG-VDVLAWESFGLGWMSDIRQLSLQ----------DV------REFTAPYGSLPDFSKV-DF--D--RDVVFVWNGTTS 148 (391)
Q Consensus 91 ~~-~~~~~~g~~~~r~~~~~~~~~~~----------~~------~~~~~~~g~~~~~~~~-~~--~--~~v~~~h~ETst 148 (391)
++ ..+...|.|.+|-+.-+..--.. -. -....|+|.+..+... +. . ++|+.+-.|=..
T Consensus 134 ~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYgd~EAl~~aL~~P~~~GDnVAA~i~EPIQ 213 (426)
T TIGR01885 134 NKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYGDLEALRKALQDPKKTGDNVAAFILEPIQ 213 (426)
T ss_pred CCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC
T ss_conf 62389985388733035443202672120067879677433578521155888789999972757788868999950403
Q ss_pred C---EEECCEE------EECCCCCCEEEEEECCHHHHCC-----CCCCC--C--EEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf 0---2203203------5025686148864011011025-----45568--5--79997001200176651544567788
Q gi|254780153|r 149 G---VCVPDVG------FIPESREGLVICDATSAVFARH-----IDFNK--L--DVVTFSAQKVLGGEAGFGIIILSPAS 210 (391)
Q Consensus 149 G---v~~~~~~------~~~~~~~~llivD~vSs~g~~p-----~d~~~--i--Dv~~a~sQK~l~~ppGl~~v~~s~~a 210 (391)
| |..|... .+|.++++|+|+|=|++=.++- .|+++ + |++.- .|+|+| |+-+|..-
T Consensus 214 GEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~PDi~lL--GKALsG--Gv~PiSa~--- 286 (426)
T TIGR01885 214 GEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGRTGKLLACDHENAEVKPDIVLL--GKALSG--GVYPISAV--- 286 (426)
T ss_pred CCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCEEE--EHHHCC--CCCCEEEE---
T ss_conf 54436848963578999986551872898200038402545331010588204503351--123458--94622436---
Q ss_pred HHHHHHCCCCCCCCCHHHCCHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8765411445778312320011232103-347864466644889999999986201031899999999779999999874
Q gi|254780153|r 211 VERLEKYVPSWPLPKIFRMVKGGRVMEG-LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE 289 (391)
Q Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~ 289 (391)
-.... .|.-.. .+ ..+++|+.==|.. -.+.-++|+-+++| +.-+|..++...+.+.+.+
T Consensus 287 -------la~~d---im~vl~-----PGPF~HGSTfGGNPLA-cavaiAaLeVL~~e----kL~~~A~~lG~~f~~~L~~ 346 (426)
T TIGR01885 287 -------LADDD---IMSVLK-----PGPFEHGSTFGGNPLA-CAVAIAALEVLEEE----KLAERADQLGDMFLDELKQ 346 (426)
T ss_pred -------EECCC---EEECCC-----CCCCCCCCCCCCCHHH-HHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHH
T ss_conf -------66464---012117-----6486567768875789-99999999987404----5068898832899999998
Q ss_pred CCCCCC-CCCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHH
Q ss_conf 797167-66882003653178-98247310113734567888999998886282872665-5676750568615888999
Q gi|254780153|r 290 NDWIEN-LAVDETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKE 366 (391)
Q Consensus 290 ~~~~~~-~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~ 366 (391)
..--++ .+ .+.|+....+ +.+.+...... ..-++. ..-++++++--.- | .+.+|+.-==.|+.|
T Consensus 347 l~~~S~dvv--~EVRGkGLL~AIe~~~~ka~~~-------~~w~~C-l~~k~~GLlak~~nh---d~~IR~aPPL~i~~E 413 (426)
T TIGR01885 347 LARESPDVV--KEVRGKGLLIAIEFKENKADEI-------GAWDVC-LRLKENGLLAKPTNH---DKIIRLAPPLVITKE 413 (426)
T ss_pred HHHHCCCCE--EHHCCCCCEEEEEEECCCCCCC-------CHHHHH-HHHHCCCCEECCCCC---CCEEEECCCCCCCHH
T ss_conf 875076400--0115672168888506533326-------466887-885207421013358---706871788526389
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780153|r 367 DLLLLCDWLR 376 (391)
Q Consensus 367 dv~~L~~aLe 376 (391)
|++.-++.|.
T Consensus 414 ~L~~~ie~i~ 423 (426)
T TIGR01885 414 QLDEVIEIIR 423 (426)
T ss_pred HHHHHHHHHH
T ss_conf 9999999986
No 262
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=98.70 E-value=2.3e-06 Score=59.85 Aligned_cols=213 Identities=15% Similarity=0.043 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEECCC-
Q ss_conf 999999999999996889985799974873489998753205789707997-073688888765323876306740577-
Q gi|254780153|r 47 KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTAPY- 124 (391)
Q Consensus 47 ~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~~~- 124 (391)
..+++++++.+.++|+... .+|+.+|.|.++-++++.++++|+++++. |..-|- -......+...+.+...+
T Consensus 58 ~g~I~eAq~laA~~~ga~~---s~flvnGsT~g~~a~i~a~~~~gd~vlv~RN~HkSv---~~gl~l~g~~Pvyl~p~~~ 131 (294)
T cd00615 58 TGPIKEAQELAARAFGAKH---TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSV---INGLVLSGAVPVYLKPERN 131 (294)
T ss_pred CCHHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHH---HHHHHHCCCEEEEEECCCC
T ss_conf 7199999999999839996---699827726999999998328999899826518999---9999986984899606435
Q ss_pred ---CC--CCCHHHCC-------CCCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH--HHHCC-CC----CCC
Q ss_conf ---76--57867678-------55657997420242022032035--0256861488640110--11025-45----568
Q gi|254780153|r 125 ---GS--LPDFSKVD-------FDRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA--VFARH-ID----FNK 183 (391)
Q Consensus 125 ---g~--~~~~~~~~-------~~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs--~g~~p-~d----~~~ 183 (391)
|. .++.++++ ..+ .+++-+-|=.|+..++..+ +++.++.+++||.-=. ++-.| ++ ..+
T Consensus 132 ~~~gi~~~i~~~~~~~al~~~p~~k-av~lt~PtY~G~~~Dl~~i~~~~h~~~~~llVDEAhGah~~F~~~lp~~a~~~G 210 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAK-AAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCC-EEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCHHHCC
T ss_conf 5569538999999999998589965-899977998877668999999984049979997754034431877875566669
Q ss_pred CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 57999700120017665154456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r 184 LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL 263 (391)
Q Consensus 184 iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i 263 (391)
.|+++.|.+|-|++-..-+++-++.+.+... - +...... .|| -.|+-.++..+..+-.++
T Consensus 211 AD~vv~S~HKtL~altQ~s~lh~~~~~v~~~-----------~--l~~~l~~------~qT-TSPSYllmASlD~ar~~~ 270 (294)
T cd00615 211 ADIVVQSTHKTLPALTQGSMIHVKGDLVNPD-----------R--VNEALNL------HQS-TSPSYLILASLDVARAMM 270 (294)
T ss_pred CEEEEECHHHCCCCCCHHHHEEECCCCCCHH-----------H--HHHHHHH------HCC-CCHHHHHHHHHHHHHHHH
T ss_conf 6399962321453322253202379968999-----------9--9999998------838-875899999999999999
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0103189999999977999999987
Q gi|254780153|r 264 KKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 264 ~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
.++ | +..+.+.-+.+..+++.|.
T Consensus 271 ~~~-G-~~l~~~~l~~a~~~R~~i~ 293 (294)
T cd00615 271 ALE-G-KELVEELIELALYARQEIN 293 (294)
T ss_pred HHH-H-HHHHHHHHHHHHHHHHHHC
T ss_conf 999-9-9999999999999999965
No 263
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase; InterPro: IPR011282 This entry represents a narrowly defined clade of animal and bacterial (almost exclusively proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homologue from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.; GO: 0008890 glycine C-acetyltransferase activity.
Probab=98.69 E-value=2.3e-06 Score=59.85 Aligned_cols=305 Identities=18% Similarity=0.169 Sum_probs=194.1
Q ss_pred CCCCCCHHHHHHHHHHHCCC----CCCCCHH----HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 87768968999986321036----5328988----999999999999999688998579997487348999875320578
Q gi|254780153|r 19 GPCAKRPGWSLGILEGALLG----RSHRCVL----GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGY 90 (391)
Q Consensus 19 GP~~~~p~~v~~~~~~~~l~----~sHRs~~----f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~ 90 (391)
|=+. ||+ |++|...+|=+ .| |-. -++++++..+.|.++|++.| .++ . +|.-=|+-...=.|+++
T Consensus 52 GLs~-HP~-~I~AA~~Al~~~GfGls--SVRFICGTQd~HK~LE~~iA~F~~~ED--tIL-Y-~scFDANgGlFE~LLg~ 123 (395)
T TIGR01822 52 GLSD-HPD-VIQAAKDALDEHGFGLS--SVRFICGTQDLHKELEAKIAAFLGTED--TIL-Y-ASCFDANGGLFETLLGE 123 (395)
T ss_pred CCCC-CHH-HHHHHHHHHHHCCCCEE--EEEEECCCCHHHHHHHHHHHHHHCCCC--HHH-H-HHHHHCCCCCCHHHCCC
T ss_conf 6467-557-99999998874389513--432121674356899999999716530--445-4-56663055422010475
Q ss_pred CCEEEEEE-CC----HHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCCC--CCEEEEE--EECCCCEEECCEEE
Q ss_conf 97079970-73----68888876532387630674057776578676----7855--6579974--20242022032035
Q gi|254780153|r 91 RGVDVLAW-ES----FGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDFD--RDVVFVW--NGTTSGVCVPDVGF 157 (391)
Q Consensus 91 ~~~~~~~~-g~----~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~--~~v~~~h--~ETstGv~~~~~~~ 157 (391)
+|+++... ++ =|-| ...++++...+.+ ..+++. .+.. ....++- .=+-.|..-|..++
T Consensus 124 eDAiiSDaLNHASIIDGvR-LCKAkrYRY~~~d--------m~dLe~~L~~A~~~Gar~~Li~tDGvFSMDG~iA~L~~i 194 (395)
T TIGR01822 124 EDAIISDALNHASIIDGVR-LCKAKRYRYANND--------MADLEAQLKEAQAAGARHRLIATDGVFSMDGTIAPLDEI 194 (395)
T ss_pred CCCCHHHHHCCCHHHHHHH-HHHHHHHHHHCCC--------HHHHHHHHHHHHHCCCCEEEEEECCEEECCCCEECHHHH
T ss_conf 4422102224310230035-4223343230588--------889999999999738958998646602068731076789
Q ss_pred --ECCCCCCEEEEEECCHHH--------HCC-CC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCC
Q ss_conf --025686148864011011--------025-45-568579997001200176651544567788876541144577831
Q gi|254780153|r 158 --IPESREGLVICDATSAVF--------ARH-ID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPK 225 (391)
Q Consensus 158 --~~~~~~~llivD~vSs~g--------~~p-~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~ 225 (391)
++.++++|+.||=.=+.| +.+ .| ++++|++-..-.|+|||-.| |+...+++.++-+.+. ++||
T Consensus 195 ~~LA~~Y~ALv~~DecHA~GflG~~GRG~~E~~gv~g~vdI~tgTLGKAlGGA~G-GfTta~~evv~lLRQR--sRPY-- 269 (395)
T TIGR01822 195 CDLADKYDALVMVDECHATGFLGATGRGTAELLGVMGRVDIITGTLGKALGGASG-GFTTARKEVVELLRQR--SRPY-- 269 (395)
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHCCCCC-CCCCCCHHHHHHHHHC--CCCC--
T ss_conf 9999855987887443342332789986142137675257740543345114567-6437746799985312--6511--
Q ss_pred HHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 23200112321033478644666448899999999862010318999999997799999998747971676688200365
Q gi|254780153|r 226 IFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSN 305 (391)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~ 305 (391)
.|+ ||-|=..|-+-.++|+.+++ =..+..+-.++.+.+|+.+++.+ |.. +|.. ++
T Consensus 270 LFS-----------------NslpP~vvga~~~vl~~l~~---s~~l~~~L~~n~~~FR~~m~AaG-Fd~---~p~~-hp 324 (395)
T TIGR01822 270 LFS-----------------NSLPPAVVGASIKVLDMLEG---SNELRDRLAENTRYFRERMEAAG-FDV---KPAE-HP 324 (395)
T ss_pred CHH-----------------CCCCHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHCC-CCC---CCCC-CC
T ss_conf 000-----------------46306899999999999842---05799999999998787534247-401---7898-85
Q ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 3178982473101137345678889999988862828726655676750---5686158889999999999999999999
Q gi|254780153|r 306 TSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 306 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
+.++-+ .++.....+...|.++|+.+=-=-|+-+||| ||+=+--..++|++++-++|--.+-.+.
T Consensus 325 -I~pvMl-----------yDA~~Aq~~A~~Ll~~GiYv~GFfYPVVPKGqARIRvQ~SA~H~~e~l~~a~~AF~~~G~~l 392 (395)
T TIGR01822 325 -IIPVML-----------YDAKLAQRFAERLLEEGIYVIGFFYPVVPKGQARIRVQISAVHTEEQLDRAVEAFTRVGREL 392 (395)
T ss_pred -CEEEEC-----------CCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -102321-----------14789999999998779289974526437886124441025689889999999999987862
No 264
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.68 E-value=3.7e-05 Score=52.22 Aligned_cols=299 Identities=16% Similarity=0.062 Sum_probs=156.2
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCCCCCC-C--HHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 8868887768-9689999863210365328-9--889999999999999996889-98579997487348999875320-
Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLGRSHR-C--VLGKERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALWSL- 87 (391)
Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~~sHR-s--~~f~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~nl- 87 (391)
.+|+-|=-.. .|..+++++.... + .|+ + .=..++-+.+.+.+++-++.+ .+-+-++++.|++.++..+...+
T Consensus 24 I~L~iG~Pd~p~p~~i~~a~~~a~-~-~~~Y~~~~G~~eLReaia~~~~~~~g~~~~~~~~I~vt~G~~~al~~l~~~l~ 101 (357)
T TIGR03539 24 VDLSVGTPVDPVPPLIRAALAAAA-D-APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLG 101 (357)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHH-C-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH
T ss_conf 888799999998999999999712-4-79989984779999999999999719997995759986887999999999970
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC--CCCCEEEEEEECCCCEEECCEE-----EECC
Q ss_conf 57897079970736888887653238763067405777657867678--5565799742024202203203-----5025
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVPDVG-----FIPE 160 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~~~~-----~~~~ 160 (391)
+++||.+++-.=.|... ....+..+..+...+ +++++. ..+.+.++.=..-||...+..+ .+|+
T Consensus 102 ~~pGD~Vli~~P~y~~y--~~~~~~~g~~~v~~d-------~~~~~~~~~~k~i~l~~P~NPTG~v~s~~~l~~l~~~a~ 172 (357)
T TIGR03539 102 LGPGDTVVIPELAYPTY--EVGALLAGATPVAAD-------DPTELDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWAR 172 (357)
T ss_pred CCCCCEEEECCCCCCCH--HHHHHHCCCEEEECC-------CHHHCCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHCC
T ss_conf 79999899788877008--999998599898238-------866679778549998999896232082889999987320
Q ss_pred CCCCEEEEEECCHH---HHCCCC--------CCCCE-EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf 68614886401101---102545--------56857-999700120017665--15445677888765411445778312
Q gi|254780153|r 161 SREGLVICDATSAV---FARHID--------FNKLD-VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 161 ~~~~llivD~vSs~---g~~p~d--------~~~iD-v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
.++.++|.|-+=+- .+.+.. .+.-. +++.|.-|.++ .|| +|.++.+++.+++......
T Consensus 173 ~~~i~visDEiY~~~~~~~~~~s~l~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~~~~li~~l~~~~~------- 244 (357)
T TIGR03539 173 ERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSN-LAGYRAGFVAGDPALVAELLTVRK------- 244 (357)
T ss_pred CCEEEEECHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCC-CCCCEEEEEECCHHHHHHHHHHHH-------
T ss_conf 555899523324765358988430286453767576799961531004-556128999679999999999998-------
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391)
.....+|. ..-.++..+++ +.+=+....++++++...+.+.++..+ +.... + ..
T Consensus 245 ---------------~~~~~~~~-~~q~a~~~al~---~~~~~~~~~~~~~~rr~~l~~~L~~~g-~~~~~--p----~g 298 (357)
T TIGR03539 245 ---------------HAGLMVPA-PVQAAMVAALG---DDGHVAEQKARYAARRAQLKPALEKAG-FRIDH--S----EA 298 (357)
T ss_pred ---------------HCCCCCCH-HHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC--C----CE
T ss_conf ---------------56777889-99999999956---927899999999999999999998579-77626--8----80
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHH
Q ss_conf 17898247310113734567888999998886282872665-5676750-5686158889999999
Q gi|254780153|r 307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLL 370 (391)
Q Consensus 307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~ 370 (391)
...+-...+. + .......|.++|+++--|- +...+++ +||+.-. +++.++.
T Consensus 299 ~~y~~~~~~~----~-------~~~~~~~l~e~gV~v~PG~~Fg~~g~~~vRis~~~--~~e~l~e 351 (357)
T TIGR03539 299 GLYLWATRGE----D-------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA--TDERIAA 351 (357)
T ss_pred EEEEEEECCC----C-------HHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECC--CHHHHHH
T ss_conf 6999875899----9-------99999999969989947874478999979999729--9999999
No 265
>TIGR01326 OAH_OAS_sulfhy O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; InterPro: IPR006235 This family of sequences is a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine sulfhydrylase (OAH, 2.5.1.49 from EC) and O-acetylserine sulfhydrylase (OAS, 2.5.1.47 from EC). An alternate name for OAH sulfhydrylase is homocysteine synthase.; GO: 0016765 transferase activity transferring alkyl or aryl (other than methyl) groups, 0006520 amino acid metabolic process.
Probab=98.65 E-value=2.4e-07 Score=66.13 Aligned_cols=219 Identities=18% Similarity=0.130 Sum_probs=126.0
Q ss_pred HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE---ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC
Q ss_conf 9996889985799974873489998753205789707997---0736888887653238763067405777657867678
Q gi|254780153|r 58 RKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA---WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD 134 (391)
Q Consensus 58 ~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~---~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 134 (391)
+++-.+.-.--. +...||+.|.-.++.|+.+-||.++.+ +|+=..-+..-++++| ++++..+.+. ++++++
T Consensus 64 ~RiAALEGGvaa-l~~ASG~AA~~~Ailnla~AGDnIVsS~~LYGGTynLF~~TlkrlG-IevrFvd~dd----~pe~~~ 137 (434)
T TIGR01326 64 QRIAALEGGVAA-LAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG-IEVRFVDGDD----DPEELE 137 (434)
T ss_pred HHHHHHCCCEEE-HHHCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCC-EEEEEECCCC----CHHHHH
T ss_conf 888642155000-2101157999999999972698269806444225789999555448-1488727888----878999
Q ss_pred CC--CCEEEEEEECCCCEEECCEE--------EECCCC--CCEEEEEEC--CH-HHHCCCCCCCCEEEEECCHHCCCCCC
Q ss_conf 55--65799742024202203203--------502568--614886401--10-11025455685799970012001766
Q gi|254780153|r 135 FD--RDVVFVWNGTTSGVCVPDVG--------FIPESR--EGLVICDAT--SA-VFARHIDFNKLDVVTFSAQKVLGGEA 199 (391)
Q Consensus 135 ~~--~~v~~~h~ETstGv~~~~~~--------~~~~~~--~~llivD~v--Ss-~g~~p~d~~~iDv~~a~sQK~l~~pp 199 (391)
.. ..--.+..||. -||... .++|++ ++++|||=| +. +.++||+ -++|+|+-|.=|.|||-
T Consensus 138 k~id~nTKAvf~EtI---gNP~~~v~Die~~a~~Ah~~PhgvPliVDNT~atpGYL~rPi~-hGADIVvhSaTK~iGGH- 212 (434)
T TIGR01326 138 KAIDENTKAVFAETI---GNPALNVPDIEAVAEVAHAHPHGVPLIVDNTFATPGYLCRPID-HGADIVVHSATKYIGGH- 212 (434)
T ss_pred HHCCCCCEEEEEECC---CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHH-CCCCEEEEEECCCCCCC-
T ss_conf 760667518984012---3877676785899999986789834887478687641006456-49867996100101263-
Q ss_pred CCEEEEE---CHHHHHHHHHCCCCCCCCCHHHCCHH------HHHHCCCCCCCCCCCCCHHHHHHHHHHHH---------
Q ss_conf 5154456---77888765411445778312320011------23210334786446664488999999998---------
Q gi|254780153|r 200 GFGIIIL---SPASVERLEKYVPSWPLPKIFRMVKG------GRVMEGLFCGETINTPSLLCIEDYIDALL--------- 261 (391)
Q Consensus 200 Gl~~v~~---s~~al~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~TP~v~~i~al~~~l~--------- 261 (391)
|.++=-+ |-+--+ +.... -+|..+... .++.+...++.-...++ ..|.++....
T Consensus 213 G~aiGG~ivD~G~Fnd----W~~~~--gkFP~f~~PdpsYHGl~f~E~~g~~~~~G~~~--~Afi~~~Rv~~LRD~Gaa~ 284 (434)
T TIGR01326 213 GTAIGGVIVDGGKFND----WANNP--GKFPLFTTPDPSYHGLVFTETFGEFEGLGLGN--IAFIVKARVQLLRDLGAAL 284 (434)
T ss_pred EEEEEEEEEECCCCCC----CCCCC--CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC--HHEEEEEEEEECHHCCCCC
T ss_conf 1465047882675563----01478--74777888888658712653155757778500--0003444674221003340
Q ss_pred -----HHHCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf -----62010--31899999999779999999874797167
Q gi|254780153|r 262 -----WLKKM--GGLSACVERCNANAAVLFQFIQENDWIEN 295 (391)
Q Consensus 262 -----~i~~~--gGl~~~~~r~~~~a~~l~~~i~~~~~~~~ 295 (391)
|+..+ +.|.=|.+||.+||..+-+||++++-...
T Consensus 285 sPFnAFLllQGLETLsLR~ERH~~NA~kVA~fL~~Hp~V~w 325 (434)
T TIGR01326 285 SPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAW 325 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 17899999986667876788888999999999727884451
No 266
>KOG1404 consensus
Probab=98.63 E-value=4.3e-05 Score=51.78 Aligned_cols=327 Identities=14% Similarity=0.078 Sum_probs=179.3
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---CCCCCEEEEEEC
Q ss_conf 96899998632103653289889-99999999999999688998579997487348999875320---578970799707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---LGYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~~~~~~~~~~~g 99 (391)
+|+ |.+++..++.-..|-+.-| .+-+.+.-+.|... .|++-.++|+..||+.|.|.+++=. -+.-+.+-..++
T Consensus 68 hP~-v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~--~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~ 144 (442)
T KOG1404 68 HPD-VVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSK--LPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNS 144 (442)
T ss_pred CHH-HHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH--CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 847-8999998645328730121487089999999986--8877128999558745889999999986297158875055
Q ss_pred CHHHHHHHHHHHCC------CC----------CEEEEECCCCCC----------CCHHH---CCCCCCEEEEEEECCCCE
Q ss_conf 36888887653238------76----------306740577765----------78676---785565799742024202
Q gi|254780153|r 100 SFGLGWMSDIRQLS------LQ----------DVREFTAPYGSL----------PDFSK---VDFDRDVVFVWNGTTSGV 150 (391)
Q Consensus 100 ~~~~r~~~~~~~~~------~~----------~~~~~~~~~g~~----------~~~~~---~~~~~~v~~~h~ETstGv 150 (391)
+.|.-......... .. +.+....+++-. ..+++ .+....++-.-.||..|+
T Consensus 145 YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGv 224 (442)
T KOG1404 145 YHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGV 224 (442)
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCC
T ss_conf 36773553024467764556788877651268998311567997324568888887778887358775147875300167
Q ss_pred EECC---------EEEECCCCCCEEEEEECCHHHHCCCCCCCC---EE--EEECCHHCCCCCCCCEEEEECHHHHHHHHH
Q ss_conf 2032---------035025686148864011011025455685---79--997001200176651544567788876541
Q gi|254780153|r 151 CVPD---------VGFIPESREGLVICDATSAVFARHIDFNKL---DV--VTFSAQKVLGGEAGFGIIILSPASVERLEK 216 (391)
Q Consensus 151 ~~~~---------~~~~~~~~~~llivD~vSs~g~~p~d~~~i---Dv--~~a~sQK~l~~ppGl~~v~~s~~al~~~~~ 216 (391)
-.-+ ...++++++.++|+|=+.+-.++-=.+|++ |+ .+-.--|+||.--=++.|+.+++--+...+
T Consensus 225 gG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~ 304 (442)
T KOG1404 225 GGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQ 304 (442)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHH
T ss_conf 75313881189999999997597898543443645552510100168772099998652488700256327899999985
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391)
... ...|+.--|+..- +-.++|+-+++ +++.++.++....+.+.+.+..--.+.
T Consensus 305 ~~~---------------------~fnTyggnP~a~a-vg~aVL~Vike----e~LqE~aa~vG~yl~~~l~~l~d~h~i 358 (442)
T KOG1404 305 KSS---------------------HFNTYGGNPVACA-VGLAVLKVIKE----ENLQENAAEVGSYLLEKLAALKDKHPI 358 (442)
T ss_pred CCC---------------------CCCCCCCCCHHHH-HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 213---------------------5203378825678-88999999988----767888999999999999987414873
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 68820036531789824731011373456788899999888628287266556767505686158889999999999999
Q gi|254780153|r 297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+.|-.-|..+.-+=.+.|..- . .......-..+...+++.|+.++.++. .|..|||.--=-++.+|++.+.++.+
T Consensus 359 IGdVRG~GLm~GvE~V~dk~~--~-~pp~~~~~~~i~~~cke~Gvlvg~g~i--~G~vfriaPPlciT~edi~f~~~~~~ 433 (442)
T KOG1404 359 IGDVRGRGLMLGVELVSDKSE--P-KPPATAEGAVIGEQCKELGVLVGKGGI--HGNVFRIAPPLCITKEDIDFAVEYFE 433 (442)
T ss_pred EEECCCCEEEEEEEEECCCCC--C-CCCCHHHHHHHHHHHHHHCEEEECCCC--CCEEEEECCCEECCHHHHHHHHHHHH
T ss_conf 552135414888887226677--8-894067788998998974856410423--23179836985434899889999998
Q ss_pred HHHHHHHHH
Q ss_conf 999999998
Q gi|254780153|r 377 WVFYFQKIS 385 (391)
Q Consensus 377 ~~~~~~k~~ 385 (391)
++...+.+
T Consensus 434 -~~~~~~~~ 441 (442)
T KOG1404 434 -VLTSTVAQ 441 (442)
T ss_pred -HHHHHHHC
T ss_conf -88677533
No 267
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.60 E-value=1.9e-05 Score=54.05 Aligned_cols=285 Identities=20% Similarity=0.168 Sum_probs=146.8
Q ss_pred EEECCCCHHHHHHHHHHCCCCCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC--CCCEEEEEE
Q ss_conf 99748734899987532057897079970---7368888876532387630674057776578676785--565799742
Q gi|254780153|r 70 AIVPASDTGAVEMALWSLLGYRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF--DRDVVFVWN 144 (391)
Q Consensus 70 ~~l~GsgT~~~ea~~~nl~~~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~v~~~h~ 144 (391)
.+-.+||..+...++.|+.+.||.++... |+-..-+...+.+++ .++...+.+. ++.++. ...--.+..
T Consensus 80 a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~G-i~v~fvd~~d-----~~~~~~aI~~nTkavf~ 153 (426)
T COG2873 80 ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLG-IEVRFVDPDD-----PENFEAAIDENTKAVFA 153 (426)
T ss_pred HHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC-CEEEEECCCC-----HHHHHHHHCCCCCEEEE
T ss_conf 13331335899999998645887067513233754889998888648-1799927999-----89999873822406878
Q ss_pred ECCC---CEEECCEE--EECCCCCCEEEEEECCH--HHHCCCCCCCCEEEEECCHHCCCCCCCCEE--EEECHHHHHHHH
Q ss_conf 0242---02203203--50256861488640110--110254556857999700120017665154--456778887654
Q gi|254780153|r 145 GTTS---GVCVPDVG--FIPESREGLVICDATSA--VFARHIDFNKLDVVTFSAQKVLGGEAGFGI--IILSPASVERLE 215 (391)
Q Consensus 145 ETst---Gv~~~~~~--~~~~~~~~llivD~vSs--~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~--v~~s~~al~~~~ 215 (391)
||.- +...+++. .++|+++.++|||-+-+ ...+|++ -+.|+++-|.-|.+||- |.++ +++---- .
T Consensus 154 EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~-hGADIVvHS~TK~igGh-Gt~iGG~iVD~G~----F 227 (426)
T COG2873 154 ETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIE-HGADIVVHSATKYIGGH-GTAIGGVIVDGGK----F 227 (426)
T ss_pred EECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEECCHHH-CCCCEEEEEECCCCCCC-CCCCCEEEEECCC----C
T ss_conf 7516887663577999999987599389836777300436656-18877998603012677-6542407986775----4
Q ss_pred HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH-----------HHHCC--CCHHHHHHHHHHHHHH
Q ss_conf 1144577831232001123210334786446664488999999998-----------62010--3189999999977999
Q gi|254780153|r 216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL-----------WLKKM--GGLSACVERCNANAAV 282 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~-----------~i~~~--gGl~~~~~r~~~~a~~ 282 (391)
.+..+. +|..+......+ .....---+.++.+.+.+-.+-|+ |...+ +.|.=|.+||-+++..
T Consensus 228 Dw~~~~---rfP~~~~p~p~Y-hGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~ 303 (426)
T COG2873 228 DWTANG---RFPEFTTPDPSY-HGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALK 303 (426)
T ss_pred CCCCCC---CCCCCCCCCCCC-CCEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 554577---786667898442-5543254224078999999988875165569378899983433667789998776999
Q ss_pred HHHHHHHCCCCCCC-----CCCCCC---------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-
Q ss_conf 99998747971676-----688200---------365317898247310113734567888999998886282872665-
Q gi|254780153|r 283 LFQFIQENDWIENL-----AVDETT---------RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS- 347 (391)
Q Consensus 283 l~~~i~~~~~~~~~-----~~~~~~---------rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~- 347 (391)
+-+|+++++..... ...+.+ ..-.+.+|.+.+.. +...+++..+.-...-.|+. |.+-
T Consensus 304 vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~gavltF~~kgg~------ea~~~fi~~l~L~s~laNvG-D~rsL 376 (426)
T COG2873 304 VAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGY------EAGKKFIDALKLFSHLANIG-DARSL 376 (426)
T ss_pred HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCHH------HHHHHHHHHHHHHHHHCCCC-CCCEE
T ss_conf 999986099710342799888943577986364786438998706718------99999999999998603546-56427
Q ss_pred --------CCC--------CC---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --------567--------67---50568615888999999999999999999
Q gi|254780153|r 348 --------YRD--------AP---LGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 348 --------~r~--------~~---~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
|+. +| ..+|+|++= ||++.++.=||.|+..
T Consensus 377 vIHPAsTTH~ql~eee~~~aGvt~~~IRlSVGI----Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 377 VIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI----EDIDDIIADLEQALEA 425 (426)
T ss_pred EECCCCCHHHHCCHHHHHHCCCCCCCEEEEECC----CCHHHHHHHHHHHHHC
T ss_conf 766774012206999998469987837998456----8789999989999851
No 268
>PRK12414 putative aminotransferase; Provisional
Probab=98.60 E-value=6.4e-05 Score=50.66 Aligned_cols=319 Identities=11% Similarity=0.041 Sum_probs=168.5
Q ss_pred CCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCC-CCH--HHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHH
Q ss_conf 8998886888776-8968999986321036532-898--8999999999999999688998--57999748734899987
Q gi|254780153|r 10 KPKRPFFSSGPCA-KRPGWSLGILEGALLGRSH-RCV--LGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMA 83 (391)
Q Consensus 10 ~p~~~~F~pGP~~-~~p~~v~~~~~~~~l~~sH-Rs~--~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~ 83 (391)
.++-.||+-|=-. -+|..+++++.+.+..-.| =++ =..++-+.+.+.+++.+++.-+ -+| +++.|++.++..+
T Consensus 28 ~~dvI~l~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~dp~~~i-~vt~G~~~al~~~ 106 (384)
T PRK12414 28 QHDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPDTEV-TVIASASEGLYAA 106 (384)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE-EECCCHHHHHHHH
T ss_conf 899688189899999989999999999961999898998719999999999999968999988809-9847989999999
Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-
Q ss_conf 5320578970799707368888876532387630674057776578676785-----5657997420242022032035-
Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF- 157 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~- 157 (391)
++-|+++||.+++.+=.|..- ...+...+...+.+...+.+..++.++++. .+.+.++.-..-||...+..+.
T Consensus 107 ~~al~~pGD~Vlv~~P~y~~y-~~~~~~~Ga~~v~v~~~~~~~~~d~~~l~~~~~~~tk~iil~~P~NPTG~v~s~e~l~ 185 (384)
T PRK12414 107 ISALVHPGDEVIYFEPSFDSY-APIVRLQGATPVAIKLSPEHFRVNWDEVAAAITPRTRMIIVNTPHNPTATVFSEADLA 185 (384)
T ss_pred HHHHCCCCCEEEEECCCCHHH-HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHH
T ss_conf 999679999899908970656-9999985998999866855688899999962777866999799989877137566699
Q ss_pred ----ECCCCCCEEEEEECCH---HHHCC-CCC------CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCC
Q ss_conf ----0256861488640110---11025-455------68579997001200176651--54456778887654114457
Q gi|254780153|r 158 ----IPESREGLVICDATSA---VFARH-IDF------NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSW 221 (391)
Q Consensus 158 ----~~~~~~~llivD~vSs---~g~~p-~d~------~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~ 221 (391)
++..++.++|.|-+=+ +.+.+ ... .+--+.+.|.-|.++ .||+ |.++..++.++++...+.
T Consensus 186 ~l~~la~~~~i~ii~DE~Y~~l~f~g~~~~s~~~~~~~~~~~I~i~S~SK~~~-~~G~RvG~~v~p~~li~~~~~~~~-- 262 (384)
T PRK12414 186 RLAQLTRGTDIVVLSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYH-VTGWRVGYCLAPAELMDEIRKVHQ-- 262 (384)
T ss_pred HHHHHHHHCCEEEEECCCHHHEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCC-CCCCEEEEEEECHHHHHHHHHHHH--
T ss_conf 99998751588999666323303178777664315120113323567750000-265127999848999999999997--
Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820
Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391)
.+...+++..=++...+|.. ......+.+.++++.+.+.+.+...+ +.....+
T Consensus 263 ---------------------~~~~~~~~~~Q~a~~~~l~~---~~~~~~~~~~y~~rrd~l~~~L~~~~-~~~~~p~-- 315 (384)
T PRK12414 263 ---------------------FMVFSADTPMQYAFAEALAR---PASYLGLSAFYQRKRDLLARELADSR-FELLPSE-- 315 (384)
T ss_pred ---------------------HCCCCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCC--
T ss_conf ---------------------56578678999999999829---82499999999999999999767569-8787898--
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCC--C-EEEEECCCCCCHHHHHHHHH
Q ss_conf 036531789824731011373456788899999-8886282872665-56767--5-05686158889999999999
Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAP--L-GLRVWVGVTVEKEDLLLLCD 373 (391)
Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~--~-~~RIg~~g~i~~~dv~~L~~ 373 (391)
+..-+-.++.. .. ...+ .++.. ++.+.|+++--|. ....| . .+|++.- .++++++.-++
T Consensus 316 --G~fy~~~~~~~--~~---~~~d----~~~~~~ll~e~gV~vvPG~~Fg~~g~~~g~iRlsfa--~~~e~l~eg~~ 379 (384)
T PRK12414 316 --GSFFMLARFRH--FS---DESD----SDFVLRLIRDARVATIPLSAFYADGTDTGVIRLSFS--KDDATLVEGAR 379 (384)
T ss_pred --CEEEEEEECCC--CC---CCCH----HHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEEC--CCHHHHHHHHH
T ss_conf --07999997687--89---9999----999999998599999826321799998998999967--99999999999
No 269
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.58 E-value=7e-05 Score=50.41 Aligned_cols=315 Identities=15% Similarity=0.108 Sum_probs=157.8
Q ss_pred CCCCCC-CCCCCHHHHHHHHHHHCCCCCCCCHH--HHHHHHHHHHHHHHHHCCCC--C-CEEEEECCCCHHHHHHHHHHC
Q ss_conf 886888-77689689999863210365328988--99999999999999968899--8-579997487348999875320
Q gi|254780153|r 14 PFFSSG-PCAKRPGWSLGILEGALLGRSHRCVL--GKERINKAIQLTRKVLEVPE--N-YRIAIVPASDTGAVEMALWSL 87 (391)
Q Consensus 14 ~~F~pG-P~~~~p~~v~~~~~~~~l~~sHRs~~--f~~i~~~~~~~l~~l~~~p~--~-y~v~~l~GsgT~~~ea~~~nl 87 (391)
++++-| |.--.|..+++++.+.+=+.+|=++. ..++-+.+-+-+++-++.+. | ..-++++.|++.++..++..+
T Consensus 32 I~L~iG~Pd~~~P~~v~ea~~~al~~~~~Y~~~~G~~~LReAia~~~~~~~~~~~~~dp~~~I~vt~Ga~~al~~~~~~l 111 (394)
T TIGR03538 32 IALSIGEPKHATPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAV 111 (394)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf 87848889999779999999998438889999988699999999999997398877896776998988899999999997
Q ss_pred CCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE---
Q ss_conf 5789707997-07368888876532387630674--057776578676785-----565799742024202203203---
Q gi|254780153|r 88 LGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG--- 156 (391)
Q Consensus 88 ~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~--- 156 (391)
+++||..++. -.-+..- ...+....+..+..+ ....+..+++++++. .+.+.++.=..-||...+..+
T Consensus 112 ~~pGd~~~V~~p~P~Y~~-y~~~~~~~g~~~~~v~~~~e~~~~~d~~~l~~~~~~~tk~iil~sP~NPTG~v~s~~~l~~ 190 (394)
T TIGR03538 112 INPGQAPLVVMPNPFYQI-YEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLETLKK 190 (394)
T ss_pred CCCCCCEEEEECCCCCCC-CHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 299981089947886645-2999997599899758673458888999998745236659998899999897778799999
Q ss_pred --EECCCCCCEEEEEECCHHHHC-----CC---------CCCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHH
Q ss_conf --502568614886401101102-----54---------556857--9997001200176651--544567788876541
Q gi|254780153|r 157 --FIPESREGLVICDATSAVFAR-----HI---------DFNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEK 216 (391)
Q Consensus 157 --~~~~~~~~llivD~vSs~g~~-----p~---------d~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~ 216 (391)
.+|.+++..+|.|-+=+-... |. .....+ +++.|.-|.++. ||+ |.++..++.+++...
T Consensus 191 l~~~a~~~~i~iisDE~Y~~l~~d~~~~p~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~~~~~~~i~~~~~ 269 (394)
T TIGR03538 191 LIELADQYGFIIASDECYSELYFDEANPPAGLLQAAAALGRDDFRRCLVFHSLSKRSNL-PGLRSGFVAGDAEILKAFLR 269 (394)
T ss_pred HHHHHHCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-CCCEEEEEECCHHHHHHHHH
T ss_conf 99997326769998068332785788897378777766254444767999556544454-67517999579999999998
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391)
.+. .....+| +..-++...++. .+.-+....+.++++.+.+.+.+... +...
T Consensus 270 ~~~----------------------~~~~~~~-~~~q~a~~aa~~---~~~~~~~~r~~~~~r~~~~~~~L~~~--~~~~ 321 (394)
T TIGR03538 270 YRT----------------------YHGCAMP-PPTQLASIAAWN---DEQHVRENRALYREKFAAVLEILGPV--LDLE 321 (394)
T ss_pred HCC----------------------CCCCCCC-HHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHCC--CCCC
T ss_conf 522----------------------3742689-999999999848---98999999999999999999986427--9625
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--C-----CCCCCE-EEEECCCCCCHHHH
Q ss_conf 688200365317898247310113734567888999998886282872665--5-----676750-56861588899999
Q gi|254780153|r 297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--Y-----RDAPLG-LRVWVGVTVEKEDL 368 (391)
Q Consensus 297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~-----r~~~~~-~RIg~~g~i~~~dv 368 (391)
.|+ +..-+-.+++. + ...+ ...++.++|+++--|. + ...|.+ +|++... +.+++
T Consensus 322 --~P~--Gg~y~w~~~~~------~---~~~f---~~~ll~e~gV~v~PG~~F~~~~~~~~~G~g~iR~s~~~--~~e~l 383 (394)
T TIGR03538 322 --LPD--AGFYLWPKVPG------D---DEAF---ARALYEEENVTVLPGRYLSREAEGVNPGAGRVRIALVA--PLEEC 383 (394)
T ss_pred --CCC--EEEEEEEECCC------C---HHHH---HHHHHHHCCEEEECCHHHCCCCCCCCCCCCEEEEEECC--CHHHH
T ss_conf --798--54899996899------9---9999---99999868999987734165545788899989999759--89999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780153|r 369 LLLCDWLR 376 (391)
Q Consensus 369 ~~L~~aLe 376 (391)
+.-++-|+
T Consensus 384 ~ea~~Rl~ 391 (394)
T TIGR03538 384 VEAAERIR 391 (394)
T ss_pred HHHHHHHH
T ss_conf 99999999
No 270
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.57 E-value=7.5e-05 Score=50.24 Aligned_cols=292 Identities=13% Similarity=0.058 Sum_probs=143.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC---CC-----C------CCEEEEEECCHHHHHH
Q ss_conf 28988999999999999999688998579997487348999875320---57-----8------9707997073688888
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL---LG-----Y------RGVDVLAWESFGLGWM 106 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl---~~-----~------~~~~~~~~g~~~~r~~ 106 (391)
+.+..+..-+.+..+.+.+++.-+.-..+ ++..||+.|+|+++.-. .. + +..++...++|=++..
T Consensus 78 ~~~~~~~~~~~~l~~~l~~~~~~~~l~~v-~f~~sGsEAvE~AiKlA~~y~~r~~~~~~~~~~~~~kiis~~~syHG~T~ 156 (431)
T TIGR03251 78 SNSDVYTVAMARFVDTFARVLGDPALPHL-FFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSG 156 (431)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCEE-EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEECCCCC
T ss_conf 66225569999999999985088777858-97586799999999999999764312345577776479997253659963
Q ss_pred HHHHHCCCCCEE----------EEECCCC----CCCCHHH-----------C-----CCCCCEEEEEEECCCC---EEEC
Q ss_conf 765323876306----------7405777----6578676-----------7-----8556579974202420---2203
Q gi|254780153|r 107 SDIRQLSLQDVR----------EFTAPYG----SLPDFSK-----------V-----DFDRDVVFVWNGTTSG---VCVP 153 (391)
Q Consensus 107 ~~~~~~~~~~~~----------~~~~~~g----~~~~~~~-----------~-----~~~~~v~~~h~ETstG---v~~~ 153 (391)
.-+.--+..... ....|.- .....+. + +....++.+-.|...| +..+
T Consensus 157 gals~t~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAAvI~EPIqG~gG~~~~ 236 (431)
T TIGR03251 157 YTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHF 236 (431)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
T ss_conf 33344368753357788778777779887688887650025556899999999999738995799996777677798568
Q ss_pred C------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC
Q ss_conf 2------035025686148864011011025---4--55685--799970012001766515445677888765411445
Q gi|254780153|r 154 D------VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS 220 (391)
Q Consensus 154 ~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~ 220 (391)
. .+.+|.++++|+|+|=|.+=.++- + +..++ |++ ..-|+++ .| .+..+....+.....
T Consensus 237 p~~yl~~lr~lc~~~giLLI~DEVqtGfGRtG~~fa~e~~gv~PDiv--~~gKgl~--~g--~~~~~~~~~~~~~~~--- 307 (431)
T TIGR03251 237 RPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIV--AFGKKTQ--VC--GIMAGRRVDEVADNV--- 307 (431)
T ss_pred CHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCHHHHHCCCCCCEE--EECCCCC--CC--HHHHHHHHHHHHHHH---
T ss_conf 98999999999876275055341013677667744677507889989--8777223--55--188899999999986---
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCC
Q ss_conf 778312320011232103347864466644889999999986201031899999999779999999874797167-6688
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVD 299 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~ 299 (391)
+ ......++|+.--|+.. .+..++|+.+++++ ..++.+++.+.+.+.++.+-.-.+ ++.+
T Consensus 308 --------~------~~~~~~~sT~~gnpla~-aaala~l~ii~~e~----l~~~v~~~g~~l~~~L~~l~~~~p~~V~d 368 (431)
T TIGR03251 308 --------F------AVPSRLNSTWGGNLVDM-VRATRILEIIEEER----LVDNARVQGAHLLARLHELAAEFPHLVSN 368 (431)
T ss_pred --------H------CCCCCCCCCCCCCHHHH-HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf --------4------17877678888898999-99998899986246----99999999999999999998768782456
Q ss_pred CCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 2003653178-982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r 300 ETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 300 ~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
.|...... +.++++.. ...+...+.++|+++...+ .+++|+.--=.++.++++.+++.||.+
T Consensus 369 --VRG~GLm~giel~~~~~-----------~~~~~~~~~~~Gll~~~~g----~~~ir~~PPL~it~~eid~~~~~l~~V 431 (431)
T TIGR03251 369 --PRGRGLMCAFDLPSTAD-----------RDEVIRQLYREGVLLLGCG----ERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred --EEECCEEEEEECCCHHH-----------HHHHHHHHHHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf --30133699998188167-----------9999999997893997479----998999889308899999999997269
No 271
>KOG0257 consensus
Probab=98.56 E-value=5.2e-05 Score=51.23 Aligned_cols=331 Identities=14% Similarity=0.075 Sum_probs=176.7
Q ss_pred CCCC-CCCCCHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCC---CCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 6888-77689689999863210----365328988999999999999999688---998579997487348999875320
Q gi|254780153|r 16 FSSG-PCAKRPGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEV---PENYRIAIVPASDTGAVEMALWSL 87 (391)
Q Consensus 16 F~pG-P~~~~p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~---p~~y~v~~l~GsgT~~~ea~~~nl 87 (391)
-+-| |.--+|+.|.++++... ...+-|+.=..++.+-+.+.++++++. |++ +| +++.||..++-.+++-+
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~-eV-lVT~GA~~ai~~~~~~l 113 (420)
T KOG0257 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDD-EV-LVTAGANEAISSALLGL 113 (420)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-CE-EEECCCHHHHHHHHHHH
T ss_conf 66788899974899999998742530022346679467899999998887355557866-57-99538237899999987
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCC------CCCHHHC-----CCCCCEEEEEEECCCCEEECCE
Q ss_conf 578970799707368888876532387630674-057776------5786767-----8556579974202420220320
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGS------LPDFSKV-----DFDRDVVFVWNGTTSGVCVPDV 155 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~------~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~ 155 (391)
+++||.+++.-=.|-. -.....-.++..+-+. ...+|. ..|.++. +..+.+.++.=..-||-..+-.
T Consensus 114 ~~~GDeVii~eP~fd~-Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsRe 192 (420)
T KOG0257 114 LNPGDEVIVFEPFFDC-YIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSRE 192 (420)
T ss_pred CCCCCEEEEECCCCHH-HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHH
T ss_conf 1899879993575122-456776448842440565344665576666896999864367764799948999867305799
Q ss_pred -----EEECCCCCCEEEEEECCHHHHCC----------CCCCCCEEEEECCHHCCCCCCCCEE--EEECHHHHHHHHHCC
Q ss_conf -----35025686148864011011025----------4556857999700120017665154--456778887654114
Q gi|254780153|r 156 -----GFIPESREGLVICDATSAVFARH----------IDFNKLDVVTFSAQKVLGGEAGFGI--IILSPASVERLEKYV 218 (391)
Q Consensus 156 -----~~~~~~~~~llivD~vSs~g~~p----------~d~~~iDv~~a~sQK~l~~ppGl~~--v~~s~~al~~~~~~~ 218 (391)
..+|.+++.++|.|-+=.....+ =++++.-+-+.|..|.++ -.|-=+ ++. ++.+-+.
T Consensus 193 eLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~-~TGWrlGW~ig-p~~L~~~---- 266 (420)
T KOG0257 193 ELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFG-VTGWRLGWAIG-PKHLYSA---- 266 (420)
T ss_pred HHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCEEEECCCCHHHEEEEECCCCCEEE-EEEEEEEEEEC-HHHHHHH----
T ss_conf 99999999987897999825747882178765146227762244788514521000-03456534645-4876464----
Q ss_pred CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHH-HCCCC---HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 457783123200112321033478644666448899999999--862-01031---899999999779999999874797
Q gi|254780153|r 219 PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL--LWL-KKMGG---LSACVERCNANAAVLFQFIQENDW 292 (391)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l--~~i-~~~gG---l~~~~~r~~~~a~~l~~~i~~~~~ 292 (391)
.... ..+.-+|-++....|...++ +|. +.-+| +..+.+-++++.+.+-+.++.+ +
T Consensus 267 -------------~~~v-----h~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g 327 (420)
T KOG0257 267 -------------LFPV-----HQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-G 327 (420)
T ss_pred -------------HHHH-----HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_conf -------------7878-----64552026807789999987400201687620689987999999999999999866-9
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH-HHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 16766882003653178982473101137345-67888999998886282872665567675056861588899999999
Q gi|254780153|r 293 IENLAVDETTRSNTSICMKIVDSDIASLDINS-QKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLL 371 (391)
Q Consensus 293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L 371 (391)
+.....+-.+. +.+-|.... ......+. +.-.+-.+...+.++++.. .+|.+-++. .+++...
T Consensus 328 ~~v~~p~gayy--l~adfs~~~--~~~~~~~~~~~~~d~~~~~wl~~~~Gv~----------~IP~saF~s--~~~~~~~ 391 (420)
T KOG0257 328 LKVTGPEGAYY--LWADFSLAK--SWPFFEEILEKPDDFKFVRWLIKEGGVV----------VIPPSAFGS--REHIKVA 391 (420)
T ss_pred CCCCCCCCCEE--EEEECCCCC--CCCCCHHHCCCCCCEEEEHHHHCCCCEE----------EECCHHCCC--CHHHHHH
T ss_conf 85226898438--999546534--5786222225777336452130558679----------947211378--3556788
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999877511
Q gi|254780153|r 372 CDWLRWVFYFQKISFLRAI 390 (391)
Q Consensus 372 ~~aLe~~~~~~k~~~~~~~ 390 (391)
-..+.++|.+.++..++|+
T Consensus 392 ~~~~r~~~~k~~~~L~~a~ 410 (420)
T KOG0257 392 ERLVRFCFCKADETLRKAI 410 (420)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 7778888775499999999
No 272
>PRK08637 hypothetical protein; Provisional
Probab=98.56 E-value=8.3e-05 Score=49.95 Aligned_cols=296 Identities=16% Similarity=0.141 Sum_probs=144.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-
Q ss_conf 9889999999999999996889985799974873489998753205789707997073688888765323876306740-
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT- 121 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~- 121 (391)
-++|.+...+..-+-..-+ .++.....+.+.|||++.-.+..+++.+|+.+++.+=.|.... ..+...++..+..+.
T Consensus 46 ~p~~~~~~~~~~~~~~~~~-~~~~~~~~v~T~Ggt~al~~~~~~~~~~gd~Vlip~P~W~ny~-~i~~~~~G~~v~~y~~ 123 (386)
T PRK08637 46 IEELRDLWQQKMLRDNPSL-SGKNMSLPIVTNALTHGLSLVADLFVNQGDTVLLPDHNWGNYK-LVFNTRNGANLQTYPI 123 (386)
T ss_pred CHHHHHHHHHHHHCCCCHH-HHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHH-HHHHHHCCCCEEEEEE
T ss_conf 2999999999983679211-1126466687574689999999998479998999179854179-9999837984167742
Q ss_pred -CCCCCCCCHHH----C---CCCCCEEEEEE--ECCCCEEECCEEE-----ECCC-----CCCEEEEEECC-HHHHCC--
Q ss_conf -57776578676----7---85565799742--0242022032035-----0256-----86148864011-011025--
Q gi|254780153|r 122 -APYGSLPDFSK----V---DFDRDVVFVWN--GTTSGVCVPDVGF-----IPES-----REGLVICDATS-AVFARH-- 178 (391)
Q Consensus 122 -~~~g~~~~~~~----~---~~~~~v~~~h~--ETstGv~~~~~~~-----~~~~-----~~~llivD~vS-s~g~~p-- 178 (391)
...+. ++++. + .....+.+.|| ..-||+.....++ ++++ ++.++++|..= .+....
T Consensus 124 ~~~~~~-~~~~~~~~~l~~~~~~~~vvll~n~phNPTG~~~t~ee~~~i~~~~~~~~~~g~~i~~i~D~aY~~~~~~~~~ 202 (386)
T PRK08637 124 FDKDGH-FTTDALVEALQAAYNKDKVILILNFPNNPTGYTPTHKEVTTIVEAIKALADKGTKVIAVVDDAYYGLFYEDVY 202 (386)
T ss_pred ECCCCC-CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCC
T ss_conf 646789-7819999999845778838999878999888689999999999999987733888899996014566308843
Q ss_pred -------C-CC-CCC-EEEEECCHHCCCCCCCCE--EE---EECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCC
Q ss_conf -------4-55-685-799970012001766515--44---567788876541144577831232001123210334786
Q gi|254780153|r 179 -------I-DF-NKL-DVVTFSAQKVLGGEAGFG--II---ILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE 243 (391)
Q Consensus 179 -------~-d~-~~i-Dv~~a~sQK~l~~ppGl~--~v---~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (391)
+ ++ +++ -+++.|.-|+++. .|.= .+ .-++...++... ..+. . -.+
T Consensus 203 ~~~~~~~~~~~~~~~~~i~~~s~SK~~~m-yG~RvG~l~~~~~~~~~~~~~~~---------------~~~~---~-~r~ 262 (386)
T PRK08637 203 KESLFTALANLHSNILAVKLDGATKEFFA-WGFRVGFITFGTSDQTTKEVLEA---------------KVKG---L-IRS 262 (386)
T ss_pred CCHHHHHHHCCCCCEEEEEECCCCCCCCC-CCCCEEEEEEECCCHHHHHHHHH---------------HHHH---H-HHC
T ss_conf 22499986215776489996131012557-00231578860598999999999---------------9999---9-860
Q ss_pred CCCCCCHHHHHHHHHHHHHHH---CC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 446664488999999998620---10--3189999999977999999987479716766882003653178982473101
Q gi|254780153|r 244 TINTPSLLCIEDYIDALLWLK---KM--GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391)
Q Consensus 244 ~~~TP~v~~i~al~~~l~~i~---~~--gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391)
++..||.+.-++...+|+--+ ++ .-++.+..|.....+.+.+.... ..+..++. .+-.-+++...+.
T Consensus 263 ~~Snpp~~gq~~~~~~L~~~~~~~~e~~e~~~~m~~R~~~~~~~l~~~~~~-~~~~~~p~----~~G~F~~i~~~~~--- 334 (386)
T PRK08637 263 NISSGPHPSQSAVLHVLKNPDQFDKEIEQKIQILKERYEVTKEVVYDDQYD-DHWQAYPF----NSGYFMCLKLKDV--- 334 (386)
T ss_pred CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCC----CCEEEEEECCCCC---
T ss_conf 448856899999999975908899999999999999999999997420435-68632456----7615886479989---
Q ss_pred CCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 1373456788899999-8886282872665567675056861588899999999999999999999
Q gi|254780153|r 319 SLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
+ ...+.. ++.+.++.+- ... .+.+||+.- .++.++|+.+.++|..+.+++|
T Consensus 335 --~-------~e~l~~~Lle~~~V~~v-~~g---~~~iRIs~a-als~~nI~~~~~~I~~al~~Lk 386 (386)
T PRK08637 335 --D-------AEELRVHLLEKYGIGVI-ALN---ETDLRIAFS-CVEEEDIPHVFDSIAKAIDDLR 386 (386)
T ss_pred --C-------HHHHHHHHHHCCCEEEE-ECC---CCCEEEEEE-ECCHHHHHHHHHHHHHHHHHCC
T ss_conf --9-------99999999863958999-559---997799998-5889999999999999998539
No 273
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.51 E-value=0.00011 Score=49.24 Aligned_cols=324 Identities=16% Similarity=0.078 Sum_probs=166.5
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHH------HCCC-CCCE
Q ss_conf 96899998632103653289889--999999999999996889-985799974873489998753------2057-8970
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALW------SLLG-YRGV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~------nl~~-~~~~ 93 (391)
+|+ +.+++.+++-..+|-..-| .+=-.+.-++|.++. | .+..-+|++.||+.++|.++- +..+ ++..
T Consensus 62 ~~~-i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~a--P~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~ 138 (449)
T COG0161 62 RPE-IAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELA--PEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRK 138 (449)
T ss_pred CHH-HHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHC--CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 779-999999999857740114557836999999999867--98775679980896189999999999999965997531
Q ss_pred -EE-EEECCHHHHHHHHHH-----HC------CCCCEEEEECCC-------CCCCC-----HHHCC------CCCCEEEE
Q ss_conf -79-970736888887653-----23------876306740577-------76578-----67678------55657997
Q gi|254780153|r 94 -DV-LAWESFGLGWMSDIR-----QL------SLQDVREFTAPY-------GSLPD-----FSKVD------FDRDVVFV 142 (391)
Q Consensus 94 -~~-~~~g~~~~r~~~~~~-----~~------~~~~~~~~~~~~-------g~~~~-----~~~~~------~~~~v~~~ 142 (391)
.+ ..+|+.|.-+..... .+ ....+.....|+ +.... .++++ .+..++-+
T Consensus 139 ~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAf 218 (449)
T COG0161 139 KFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAF 218 (449)
T ss_pred EEEEECCCCCCCCCHHEECCCCHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 89995267476653001356854555430144455762268996434577777748899999999999986095528999
Q ss_pred EEEC----CCCEEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCC---CEEE
Q ss_conf 4202----42022032------0350256861488640110-110--254--556857999700120017665---1544
Q gi|254780153|r 143 WNGT----TSGVCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAG---FGII 204 (391)
Q Consensus 143 h~ET----stGv~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppG---l~~v 204 (391)
-.|. ..|+..|. .+.+|..+++|+|+|=|-+ ||- ..+ +-+++-=.+.+--|+|.+ | ++.+
T Consensus 219 I~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~--GY~Pl~a~ 296 (449)
T COG0161 219 IVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTG--GYLPLSAV 296 (449)
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCHHHHHHHCCCCCCEEEECCCCCC--CCHHHHHH
T ss_conf 9552005667754187689999999999839479930110078857515566525999784655131012--65010767
Q ss_pred EECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 56778887654114457783123200112321033478644666448899999999862010318999999997799999
Q gi|254780153|r 205 ILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLF 284 (391)
Q Consensus 205 ~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~ 284 (391)
+++++-.+....-. . -....|.|+ |-+-....+..+.|+.++++ + +.+|.++....+.
T Consensus 297 l~~~~I~~~~~~~~-~----------------~~f~HG~TY-sghPlacAaAla~L~i~e~e-~---l~~~~~~~~~~l~ 354 (449)
T COG0161 297 LTSDRIYEAFSDGD-A----------------GAFMHGHTY-SGNPLACAAALANLDILEEE-D---LLERVAEIGAYLQ 354 (449)
T ss_pred HHHHHHHHHHHCCC-C----------------CEECCCCCC-CCCHHHHHHHHHHHHHHHHC-C---HHHHHHHHHHHHH
T ss_conf 50599999986466-8----------------701447866-44899999999889999856-7---9999999999999
Q ss_pred HHHHH-CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCC--
Q ss_conf 99874-797167668820036531789824731011373456788899999888628287266556767505686158--
Q gi|254780153|r 285 QFIQE-NDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGV-- 361 (391)
Q Consensus 285 ~~i~~-~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g-- 361 (391)
+.+.. .... +.|.+-..+..+-..=.+.|......+ +......+.+...++|.++... | --|..++
T Consensus 355 ~~L~~~l~~~-p~VgdVR~~Gli~~iElv~d~~t~~~f---~~~~~~~~~~~~~e~Gl~iRp~-----g--~~i~~~PPl 423 (449)
T COG0161 355 AGLQAALADH-PLVGDVRGLGLIGAIELVADKATKTPF---EARVGARVRAAALERGLLIRPL-----G--DVIYLMPPL 423 (449)
T ss_pred HHHHHHCCCC-CCEEEEECCCEEEEEEEECCCCCCCCC---HHHHHHHHHHHHHHCCEEEEEC-----C--CEEEECCCC
T ss_conf 9998751369-927872226559999984156666640---4569999999999789389555-----9--889973883
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 889999999999999999999998
Q gi|254780153|r 362 TVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 362 ~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
.++.++|+.+++.+..++......
T Consensus 424 iit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 424 IITREEIDELVDALREALDETLAD 447 (449)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 489999999999999999998750
No 274
>PRK09147 aminotransferase; Provisional
Probab=98.50 E-value=0.00012 Score=49.03 Aligned_cols=316 Identities=12% Similarity=0.042 Sum_probs=156.4
Q ss_pred CCCCCCC-CCCCHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 8868887-768968999986321036532898--899999999999999968899--85799974873489998753205
Q gi|254780153|r 14 PFFSSGP-CAKRPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVPE--NYRIAIVPASDTGAVEMALWSLL 88 (391)
Q Consensus 14 ~~F~pGP-~~~~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p~--~y~v~~l~GsgT~~~ea~~~nl~ 88 (391)
++++-|= .--.|..+.+++...+-+.+|=++ =..++-+.+-+.+++-++++. ...-++.+.|++.++..++..++
T Consensus 32 I~L~iG~Pd~~~P~~v~~a~~~a~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~~v~vt~Ga~~al~~~~~a~l 111 (397)
T PRK09147 32 ISLSIGEPKHPTPAFVRDALAANLDGLAVYPTTAGLPALRQAIARWLERRYGLPAVDPATQVLPVNGSREALFAFAQTVI 111 (397)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHC
T ss_conf 87648889999789999999998628778999978499999999999987099867857469988882899999998605
Q ss_pred CCCCE---EEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE--
Q ss_conf 78970---7997073688888765323876306740--57776578676785-----565799742024202203203--
Q gi|254780153|r 89 GYRGV---DVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-- 156 (391)
Q Consensus 89 ~~~~~---~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-- 156 (391)
.+++. +++-+=.|... .......+..+..+. ...+..+++++++. .+.+.++.=..-||...+..+
T Consensus 112 ~~gd~g~~Vl~~~P~Y~~y--~~~~~~~G~~~v~vp~~~e~~~~~d~~~l~~~i~~~tk~iil~sP~NPTG~v~s~e~l~ 189 (397)
T PRK09147 112 DRSDPGPLVVCPNPFYQIY--EGAALLAGAEPYFLNCDPANGFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWK 189 (397)
T ss_pred CCCCCCCEEEECCCCCCCC--HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHH
T ss_conf 8889888899688878774--99999769868992357122777697898987311274898689989889988889999
Q ss_pred ---EECCCCCCEEEEEECCHHH----HC-C---------CCCCCC--EEEEECCHHCCCCCCCC--EEEEECHHHHHHHH
Q ss_conf ---5025686148864011011----02-5---------455685--79997001200176651--54456778887654
Q gi|254780153|r 157 ---FIPESREGLVICDATSAVF----AR-H---------IDFNKL--DVVTFSAQKVLGGEAGF--GIIILSPASVERLE 215 (391)
Q Consensus 157 ---~~~~~~~~llivD~vSs~g----~~-p---------~d~~~i--Dv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~ 215 (391)
.+|..++..+|.|-+=+-. .. | +..... -+++.|.-|.++ -||+ |.++..++.+++..
T Consensus 190 ~l~~la~~~~i~iisDEiY~~l~~d~~~~p~~~~~~~~~~~~~~~~~~I~~~S~SK~~~-~~G~RiG~i~~~~~li~~~~ 268 (397)
T PRK09147 190 KLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSN-VPGLRSGFVAGDAALLKKFL 268 (397)
T ss_pred HHHHHHCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC-CCCCCEEEEECCHHHHHHHH
T ss_conf 99996324728999826865215479879815777777626565686899815721036-76652588868999999999
Q ss_pred HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 11445778312320011232103347864466644889999999986201031899999999779999999874797167
Q gi|254780153|r 216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN 295 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~ 295 (391)
.. ..+ .+ ...++..-++...++. .+.-+....+.++++.+.+.+.+... +..
T Consensus 269 ~~------------~~~--------~~---~~~~~~~q~A~~aa~~---~~~~~~~~r~~~~~r~~~~~~~l~~~--~~~ 320 (397)
T PRK09147 269 LY------------RTY--------HG---CAMPPQVQLASIAAWN---DEAHVRENRALYREKFDAVTPILAPV--LDV 320 (397)
T ss_pred HH------------HHH--------HH---CCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHCC--CCC
T ss_conf 97------------354--------22---2578999999999856---83679999999999999999987337--987
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-------CCCCCCE-EEEECCCCCCHH
Q ss_conf 668820036531789824731011373456788899999-8886282872665-------5676750-568615888999
Q gi|254780153|r 296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-------YRDAPLG-LRVWVGVTVEKE 366 (391)
Q Consensus 296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-------~r~~~~~-~RIg~~g~i~~~ 366 (391)
..|+ +..-+-+.+++ . + . .++.. ++.+.|+++--|. +...|.+ +|++.- .+.+
T Consensus 321 --~~P~--gg~ylw~~~~~--~---~---~----~~f~~~Ll~~~gV~v~PGs~F~~~~~g~~~G~g~vRl~~a--~~~e 382 (397)
T PRK09147 321 --QLPD--AGFYLWAKVPG--G---D---D----TAFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLA 382 (397)
T ss_pred --CCCC--EEEEEEEECCC--C---C---H----HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEC--CCHH
T ss_conf --7889--73599886899--9---9---8----9999999996899998681004233478889988999974--9899
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 367 DLLLLCDWLRWV 378 (391)
Q Consensus 367 dv~~L~~aLe~~ 378 (391)
++..-++-|+..
T Consensus 383 ~l~eal~Rl~~~ 394 (397)
T PRK09147 383 ECVEAAERIVDF 394 (397)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 275
>KOG0053 consensus
Probab=98.46 E-value=1.2e-05 Score=55.37 Aligned_cols=205 Identities=15% Similarity=0.095 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 999999999968899857999748734899987532057897079970736888--887653238763067405777657
Q gi|254780153|r 51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREFTAPYGSLP 128 (391)
Q Consensus 51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~~~~~g~~~ 128 (391)
+...+.+..+-+++. ++. -.||..+...++..|+..++..+.....|++- .+.......+..+..++..
T Consensus 80 ~~le~~iaal~ga~~---~l~-fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~----- 150 (409)
T KOG0053 80 DVLESGIAALEGAAH---ALL-FSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD----- 150 (409)
T ss_pred HHHHHHHHHHHCCCE---EEE-ECCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEECHH-----
T ss_conf 899999998718863---899-34407899999998467898589717875009999999999709354330416-----
Q ss_pred CHHHCCC--CCCEEEEEEECCCCEEE---CC--EEEECCCCCCEEEEEECCHH--HHCCCCCCCCEEEEECCHHCCCCCC
Q ss_conf 8676785--56579974202420220---32--03502568614886401101--1025455685799970012001766
Q gi|254780153|r 129 DFSKVDF--DRDVVFVWNGTTSGVCV---PD--VGFIPESREGLVICDATSAV--FARHIDFNKLDVVTFSAQKVLGGEA 199 (391)
Q Consensus 129 ~~~~~~~--~~~v~~~h~ETstGv~~---~~--~~~~~~~~~~llivD~vSs~--g~~p~d~~~iDv~~a~sQK~l~~pp 199 (391)
+++.+.. ...+-+++.||.+-=.. ++ ...+++.++.++|||.+=+- ...|+.. +.|+++-|.-|-|+|-.
T Consensus 151 ~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~l-GADIV~hSaTKyi~Ghs 229 (409)
T KOG0053 151 DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPL-GADIVVHSATKYIGGHS 229 (409)
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHC-CCCEEEEEEEEEECCCC
T ss_conf 67889986266706999977999750045699999987417978999577676333671213-88789985101444776
Q ss_pred CC--EEEEEC-HHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 51--544567-788876541144577831232001123210334786446664488999999998620103189999999
Q gi|254780153|r 200 GF--GIIILS-PASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERC 276 (391)
Q Consensus 200 Gl--~~v~~s-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~ 276 (391)
-+ |.++.+ ++...+..... ..+-.+|+-+..+.+...|+ -+.-|.++|
T Consensus 230 dvi~G~iv~n~~~~~~~l~~~~-----------------------~~lg~~~~p~~~~ll~Rglk------tl~lRi~~~ 280 (409)
T KOG0053 230 DVIGGSVVLNSEELASRLKFLQ-----------------------EDLGWCEDPFDLFLLSRGLK------TLHLRINKH 280 (409)
T ss_pred CEEEEEEECCCHHHHHHHHHHH-----------------------HHHCCCCCHHHHHHHHCCCC------HHHHHHHHH
T ss_conf 6351477617499999999999-----------------------98557998899999866841------554049888
Q ss_pred HHHHHHHHHHHHHCCCCC
Q ss_conf 977999999987479716
Q gi|254780153|r 277 NANAAVLFQFIQENDWIE 294 (391)
Q Consensus 277 ~~~a~~l~~~i~~~~~~~ 294 (391)
.+++..+-.++++++..+
T Consensus 281 ~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053 281 SENALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHHHHHHHCCCEE
T ss_conf 878999998765088536
No 276
>KOG1402 consensus
Probab=98.45 E-value=0.00015 Score=48.25 Aligned_cols=308 Identities=17% Similarity=0.119 Sum_probs=176.9
Q ss_pred CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH----------HCCCCC
Q ss_conf 9689999863210--3653289889999999999999996889985799974873489998753----------205789
Q gi|254780153|r 24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW----------SLLGYR 91 (391)
Q Consensus 24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~----------nl~~~~ 91 (391)
+|. ++++++.+. |-.+.| .-+.+++.+--+.+.++|+-. .|+.|. .|-.+.|.++- |...++
T Consensus 77 hpk-i~~aLqeq~~kLtlssr-afYnd~~~~f~~~vt~lf~~~---kvlpmn-TGaEa~Eta~KLaR~wgy~~K~ip~nk 150 (427)
T KOG1402 77 HPK-IIKALQEQADKLTLSSR-AFYNDVLGEFAEYVTKLFGYD---KVLPMN-TGAEAVETACKLARKWGYRKKNIPKNK 150 (427)
T ss_pred CHH-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCC---EEEECC-CCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 779-99999998767513367-776556789999999866854---553235-540677879999999777631688660
Q ss_pred CEEEEEECCHHHHHHHHHHHCCCCC---------E-EEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECCEE--
Q ss_conf 7079970736888887653238763---------0-67405777657867678556579974202420---2203203--
Q gi|254780153|r 92 GVDVLAWESFGLGWMSDIRQLSLQD---------V-REFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPDVG-- 156 (391)
Q Consensus 92 ~~~~~~~g~~~~r~~~~~~~~~~~~---------~-~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~~~-- 156 (391)
.+.+..-|.|.+|-...+..-+..+ . .....++|....++..=..+.|+-...|-..| |..|...
T Consensus 151 a~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL 230 (427)
T KOG1402 151 AKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYL 230 (427)
T ss_pred EEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCHHH
T ss_conf 04898505556733456771578006545699999863032268779999986298756898511346653372892067
Q ss_pred ----EECCCCCCEEEEEECCHHHHCC-----CCCCCC--EEEEECCHHCCCCCCCCEEE---EECHHHHHHHHHCCCCCC
Q ss_conf ----5025686148864011011025-----455685--79997001200176651544---567788876541144577
Q gi|254780153|r 157 ----FIPESREGLVICDATSAVFARH-----IDFNKL--DVVTFSAQKVLGGEAGFGII---ILSPASVERLEKYVPSWP 222 (391)
Q Consensus 157 ----~~~~~~~~llivD~vSs~g~~p-----~d~~~i--Dv~~a~sQK~l~~ppGl~~v---~~s~~al~~~~~~~~~~~ 222 (391)
.+|.+++.++|+|-+++=.++. .|++++ |+++.+ |+|+| |+-++ +.+++.+..
T Consensus 231 ~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilg--KalSG--G~~Pvsavl~~~~im~~--------- 297 (427)
T KOG1402 231 KKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILG--KALSG--GVYPVSAVLADDDIMLN--------- 297 (427)
T ss_pred HHHHHHHHHHCEEEEEHHHHHCCCCCCCEEEEEHHHCCCCEEEEE--CCCCC--CEEEEEEEEECHHHHHC---------
T ss_conf 899999875147888244342523467478865431587768981--11368--70456899854789861---------
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
......++|+.--| ....+.-.+|+.|.+| +...|+......+++.+.++.--.+-+ -.+.
T Consensus 298 -------------~~pgeHgsTyggNp-Lg~~vaiAalevi~ee----kL~era~~lG~~l~~~L~~l~~~~p~~-v~~V 358 (427)
T KOG1402 298 -------------IKPGEHGSTYGGNP-LGCAVAIAALEVIVEE----KLVERAAKLGEILRDQLNKLQKKFPHV-VKEV 358 (427)
T ss_pred -------------CCCCCCCCCCCCCH-HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHCCCCCCCH-HHEE
T ss_conf -------------68775556568880-8889999999999997----899999998799999998544025644-4334
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 36531789824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
|.+...+..+-+|...+....+ + ..+..++++..--..| +..||-.--=.|+++|++.-+++|+-+.
T Consensus 359 RGrGl~~ai~i~~~~~~~~~aw------~-~cl~lk~~g~LAkptH---~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402 359 RGRGLLNAIVINPSKTSGQDAW------D-VCLALKENGLLAKPTH---GNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred ECCCEEEEEEECCCCCCCHHHH------H-HHHCCCCCCCCCCCCC---CCEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 2253378899615556646588------8-8870302561047778---8758746884357899988999999974
No 277
>KOG1360 consensus
Probab=98.43 E-value=8.5e-05 Score=49.90 Aligned_cols=307 Identities=16% Similarity=0.124 Sum_probs=182.8
Q ss_pred CHHHHHHHHHHHCC----------CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC--CC
Q ss_conf 96899998632103----------6532898899999999999999968899857999748734899987532057--89
Q gi|254780153|r 24 RPGWSLGILEGALL----------GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG--YR 91 (391)
Q Consensus 24 ~p~~v~~~~~~~~l----------~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~--~~ 91 (391)
+|+ |+++|...+= +||--+..- -+..+.|.+|-+-+ ..++=+|---+.++++..|-+ |+
T Consensus 187 Hp~-V~~A~~~tl~~hG~GAGGTRNIsG~s~~h----v~LE~eLA~LHqK~----aALlFsSCfVANDstLftLak~lpg 257 (570)
T KOG1360 187 HPE-VLDAMHDTLDRHGAGAGGTRNISGHSKHH----VRLEAELADLHQKE----AALLFSSCFVANDSTLFTLAKKLPG 257 (570)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHCCC----CEEEEEEEEECCCHHHHHHHHHCCC
T ss_conf 827-99999999997188867765467787135----55999999884676----1035542134164589999977899
Q ss_pred CEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC------CCCCCEEEEEEECCCCEEECCEEE--ECCCCC
Q ss_conf 707997073688888765323876306740577765786767------855657997420242022032035--025686
Q gi|254780153|r 92 GVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV------DFDRDVVFVWNGTTSGVCVPDVGF--IPESRE 163 (391)
Q Consensus 92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~v~~~h~ETstGv~~~~~~~--~~~~~~ 163 (391)
...+...|.. +.++.-+....+...-+.......++++ ...+.++|-.+-+-+|..-|++++ +++++|
T Consensus 258 cei~SD~gNH----ASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yG 333 (570)
T KOG1360 258 CEIFSDEGNH----ASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYG 333 (570)
T ss_pred CEEECCCCCH----HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 6885366533----888877651597522424699899999997579888826887664026777577899977887717
Q ss_pred CEEEEEECCHHHHC----------CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 14886401101102----------54556857999700120017665154456778887654114457783123200112
Q gi|254780153|r 164 GLVICDATSAVFAR----------HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 164 ~llivD~vSs~g~~----------p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
++..+|-+-+.|-+ +=-+.++|++-..-.|++|+..|. +..+.+.++-... |.
T Consensus 334 AiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGY--IAat~~LvDmiRS------------yA--- 396 (570)
T KOG1360 334 AITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGY--IAATRKLVDMIRS------------YA--- 396 (570)
T ss_pred CEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCE--EHHHHHHHHHHHH------------HC---
T ss_conf 545310123100215777876656775203220014045541665423--3004469999997------------46---
Q ss_pred HHHCCCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 32103347864466---644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r 234 RVMEGLFCGETINT---PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391)
Q Consensus 234 ~~~~~~~~~~~~~T---P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391)
..++|| ||. .+.+..++.+.+..++|..-+ ..|+++-+.++..+...+ .+.+..|. -++.+
T Consensus 397 --------aGFIFTTSLPP~-vl~GAleaVr~lk~~eg~~lR-~~hqrnv~~~kq~l~~~G--iPVi~~pS----HIiPv 460 (570)
T KOG1360 397 --------AGFIFTTSLPPM-VLAGALEAVRILKSEEGRVLR-RQHQRNVKYVKQLLMELG--IPVIPNPS----HIIPV 460 (570)
T ss_pred --------CCEEEECCCCHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCC--CCCCCCCC----CEEEE
T ss_conf --------866873379828-887289999998632547899-999999999999998749--86347886----53335
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 82473101137345678889999988862828726655676750---56861588899999999999999999999987
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF 386 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~ 386 (391)
++.|+.... .....++.+.|+.+..-.|.++..| +||.--+..+++-++.|+++|..++.+...+.
T Consensus 461 ~vgda~l~~----------~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l~~ 529 (570)
T KOG1360 461 RVGDAALAK----------QASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGLPR 529 (570)
T ss_pred ECCCHHHHH----------HHHHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 506777777----------778998875275788526874566601342179998878999999999999999729865
No 278
>KOG1359 consensus
Probab=98.42 E-value=2.6e-05 Score=53.12 Aligned_cols=316 Identities=18% Similarity=0.125 Sum_probs=160.6
Q ss_pred CCCCC----CCCCCCHHHHHHHHHHHCCCC--CCCCH----HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 88688----877689689999863210365--32898----899999999999999968899857999748734899987
Q gi|254780153|r 14 PFFSS----GPCAKRPGWSLGILEGALLGR--SHRCV----LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391)
Q Consensus 14 ~~F~p----GP~~~~p~~v~~~~~~~~l~~--sHRs~----~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391)
.||++ |=++ +|+ +.++-+..+=++ .--|- -.+++.+...+.|.++-+..| +++.+ ++--+..++
T Consensus 70 lnFcaNnYLGLss-hPe-ii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED---~ilyp-scfdANag~ 143 (417)
T KOG1359 70 LNFCANNYLGLSS-HPE-IINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED---TILYP-SCFDANAGA 143 (417)
T ss_pred EEECCCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC---EEEEC-CCCCCCHHH
T ss_conf 4422454334457-838-88989999998287864316884455799999999998708775---48733-100344377
Q ss_pred HHHCCCCCCEEEEEE-CCHH-HHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEE-EECCCCEEECCEEE--E
Q ss_conf 532057897079970-7368-88887653238763067405777657867678556579974-20242022032035--0
Q gi|254780153|r 84 LWSLLGYRGVDVLAW-ESFG-LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVW-NGTTSGVCVPDVGF--I 158 (391)
Q Consensus 84 ~~nl~~~~~~~~~~~-g~~~-~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h-~ETstGv~~~~~~~--~ 158 (391)
..-++.+++.++... +.-+ -.-...+++++..++-.++.- ..+.-+..-.+..|- .=+-.|-..|..++ +
T Consensus 144 feail~pedAvfSDeLNhASIIdGirLckry~h~dv~~l~~~-----l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~L 218 (417)
T KOG1359 144 FEAILTPEDAVFSDELNHASIIDGIRLCKRYRHVDVFDLEHC-----LISACKMRLKLVVTDGVFSMDGDIAPLEEISQL 218 (417)
T ss_pred HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH-----HHHHHHHEEEEEEECCEECCCCCCCCHHHHHHH
T ss_conf 877448254121000022034324677766445126778887-----777433217999854612147873338999999
Q ss_pred CCCCCCEEEEEECCH--HHH-------CCCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 256861488640110--110-------2545-568579997001200176651544567788876541144577831232
Q gi|254780153|r 159 PESREGLVICDATSA--VFA-------RHID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 159 ~~~~~~llivD~vSs--~g~-------~p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
++++++|+++|-.-. |.+ +.+. +..+|++...-.|++||-.| ++...++..+..+.+. .++ ..|+
T Consensus 219 a~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttgp~~li~llrqr--~Rp--ylFS 293 (417)
T KOG1359 219 AKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTGPKPLISLLRQR--SRP--YLFS 293 (417)
T ss_pred HHHCCCEEEEEECCCCEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHC--CCC--EEEC
T ss_conf 9862937998604310565578887388737777640204245666247778-8746875689999852--886--1421
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI 308 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v 308 (391)
|+-|-..+-...++++.+.. -.....|-+.+-+.+++..+..+ |... ..|.-+.
T Consensus 294 -----------------nslppavV~~a~ka~dllm~---s~~~i~~~~a~~qrfr~~me~aG-ftIs-----g~~hPI~ 347 (417)
T KOG1359 294 -----------------NSLPPAVVGMAAKAYDLLMV---SSKEIQSRQANTQRFREFMEAAG-FTIS-----GASHPIC 347 (417)
T ss_pred -----------------CCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHCC-CEEC-----CCCCCCC
T ss_conf -----------------78980554156999999986---47999989889999999887528-2431-----7888742
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8982473101137345678889999988862828726655676750---5686158889999999999999999999
Q gi|254780153|r 309 CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 309 ~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.+.+.|. .....+...+.+.|+.+-.=.|+.++++ +||-.-.+.+.+||++|++|+-.+....
T Consensus 348 pv~lGda-----------~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359 348 PVMLGDA-----------RLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred CEECCCH-----------HHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 3231638-----------88888899998557169862587678884479999701047888999999999988752
No 279
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.42 E-value=6.6e-05 Score=50.58 Aligned_cols=326 Identities=13% Similarity=0.081 Sum_probs=151.3
Q ss_pred CCCCCCC-CCCCHHHHHHHHHHHCCC--C--CCCCHHHHHHHHHHHHHHH-HHHCCC-CCCEEEEECCCCHHHHHHHHHH
Q ss_conf 8868887-768968999986321036--5--3289889999999999999-996889-9857999748734899987532
Q gi|254780153|r 14 PFFSSGP-CAKRPGWSLGILEGALLG--R--SHRCVLGKERINKAIQLTR-KVLEVP-ENYRIAIVPASDTGAVEMALWS 86 (391)
Q Consensus 14 ~~F~pGP-~~~~p~~v~~~~~~~~l~--~--sHRs~~f~~i~~~~~~~l~-~l~~~p-~~y~v~~l~GsgT~~~ea~~~n 86 (391)
.+|+-|= .--+|..+.+++.+.+-+ . .|++..-..-+.+.++.+. ++++.. +.-+|++ +.|++.++-+ ++.
T Consensus 36 I~L~iGePdf~~P~~i~~a~~~ai~~~~~~~~~~gY~~~~G~~~LReaia~~~~~~~~~~d~I~v-t~Ga~~~l~~-l~a 113 (402)
T TIGR03542 36 IRLGIGDTTQPLPASVIEAFHEAVDELASEETYRGYGPEQGLPALREAIAENDYRGRISPEEIFI-SDGAKCDIGR-LQS 113 (402)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEE-CCCCHHHHHH-HHH
T ss_conf 58989998999899999999999971224678677797406499999999997568998899677-7782999999-999
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEE-EEECC------------CCCCCCHHHCCCCCCEEEEEEECCCCEEEC
Q ss_conf 05789707997073688888765323876306-74057------------776578676785565799742024202203
Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVR-EFTAP------------YGSLPDFSKVDFDRDVVFVWNGTTSGVCVP 153 (391)
Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~-~~~~~------------~g~~~~~~~~~~~~~v~~~h~ETstGv~~~ 153 (391)
++++||.+++.+=+|-.. ..+.+..+.... ..... .+..+++.+.+..+.+.++.=..-||...+
T Consensus 114 ~l~pGD~Vii~~P~y~~Y--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ktk~iiln~P~NPTG~v~s 191 (402)
T TIGR03542 114 IFGSDNTVAVQDPVYPAY--VDTAVMTGRAGFADDTGQYRGIVYLPCTKENGFIPELPEERKIDIIYLCSPNNPTGTVLT 191 (402)
T ss_pred HHCCCCEEEEECCCCCCH--HHHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 839999899838888157--999998599530135665567256767624385722234557359998999798875689
Q ss_pred CEE-----EECCCCCCEEEEEECCHH-HHC---CC------CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHH
Q ss_conf 203-----502568614886401101-102---54------5568579997001200176651--544567788876541
Q gi|254780153|r 154 DVG-----FIPESREGLVICDATSAV-FAR---HI------DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEK 216 (391)
Q Consensus 154 ~~~-----~~~~~~~~llivD~vSs~-g~~---p~------d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~ 216 (391)
..+ .+|.+++..+|.|-+=+- ... |. ++...-+.+.|.-|.++ -||+ |.++..++.......
T Consensus 192 ~eel~~i~~la~~~~i~iIsDEiY~~~~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~-m~G~RiG~~i~p~~l~~~~~~ 270 (402)
T TIGR03542 192 KEQLKELVDYANAHGSLILFDAAYSAFISDPSIPHSIYEIEGAKECAIEINSFSKSLG-FTGVRLGWTVVPKELTYADGH 270 (402)
T ss_pred HHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCEECCCCCCEEEECCCCCCCCC-CCCCCHHHEECCHHHHHHHHH
T ss_conf 9999999999875070796022288761689876201113665213673167624027-834054021125877542279
Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676
Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391)
. ..-.+.. ....+.+.+++..-++...++..-..+ -+..+...++++.+.+++.+...+ +...
T Consensus 271 ~-------~~~~~~~--------~~~~~~~~~~~~~q~a~~aal~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g-~~~~ 333 (402)
T TIGR03542 271 S-------VIQDWER--------RLCTTFNGASYPVQRAAEAAYAGEGLQ-PILEAISYYMENARILREALEAAG-FKVY 333 (402)
T ss_pred H-------HHHHHHH--------HHHHCCCCCCHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEE
T ss_conf 9-------9999999--------987625775599999999997378859-999999999999999999887569-5760
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHH
Q ss_conf 688200365317898247310113734567888999998-886282872665-5676750-5686158889999999999
Q gi|254780153|r 297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCD 373 (391)
Q Consensus 297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~ 373 (391)
. +. +..-+-+.++.. .+ ..++... +.+.|+++--|. +...|.+ +|++.-. +.++++.-++
T Consensus 334 ~--~~--ga~yl~~~~~~~----~~-------~~~~~~~ll~e~~V~vvPG~~FG~~g~g~vRls~a~--~~e~l~ea~~ 396 (402)
T TIGR03542 334 G--GE--NAPYLWVKTPEG----IS-------SWDFFDFLLYQYHIVGTPGSGFGSSGEGFVRFSAFG--KRENIVAACE 396 (402)
T ss_pred C--CC--CCEEEEEECCCC----CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEEC--CHHHHHHHHH
T ss_conf 7--99--734897878999----89-------899999999859999976447689998969999729--9999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780153|r 374 WLRWV 378 (391)
Q Consensus 374 aLe~~ 378 (391)
-|+.+
T Consensus 397 Rl~~~ 401 (402)
T TIGR03542 397 RIKHA 401 (402)
T ss_pred HHHHH
T ss_conf 99975
No 280
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase; InterPro: IPR012773 Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (2.6.1.76 from EC) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (Q9Z3R2 from SWISSPROT) or 1,3-diaminopropane (P44951 from SWISSPROT) biosynthesis. Ectoine is a compatible solute particularly effective in conferring salt tolerance.; GO: 0030170 pyridoxal phosphate binding, 0047307 diaminobutyrate-pyruvate transaminase activity, 0019491 ectoine biosynthetic process.
Probab=98.42 E-value=1.9e-05 Score=53.99 Aligned_cols=282 Identities=16% Similarity=0.141 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHHHH---HCCCCCCEEEEEECCHHHHHHHHHH--------H
Q ss_conf 8899999999999999968899-85799974873489998753---2057897079970736888887653--------2
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVPE-NYRIAIVPASDTGAVEMALW---SLLGYRGVDVLAWESFGLGWMSDIR--------Q 111 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p~-~y~v~~l~GsgT~~~ea~~~---nl~~~~~~~~~~~g~~~~r~~~~~~--------~ 111 (391)
.+|.+.++++ ||+=-+ ||+|.|--=+||-++|+|+- ..-++..++--.||..|--.-..+. .
T Consensus 81 ~~Fl~~F~~~------IL~PR~LdYK~qFpGPTGTNaVEsAlKLARKvtGR~nvvaFTNaFHGmt~GsLsvTGN~~~R~~ 154 (413)
T TIGR02407 81 REFLETFQEI------ILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVAFTNAFHGMTLGSLSVTGNRFKRQG 154 (413)
T ss_pred HHHHHHHHHH------CCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999985------2678878951568887864079999999850389840688517730234898886433444302
Q ss_pred CCCCCEEEEECCCCCCCC--HHHC--------------CCCCCEEEEEEECCCC--EEECC-------EEEECCCCCCEE
Q ss_conf 387630674057776578--6767--------------8556579974202420--22032-------035025686148
Q gi|254780153|r 112 LSLQDVREFTAPYGSLPD--FSKV--------------DFDRDVVFVWNGTTSG--VCVPD-------VGFIPESREGLV 166 (391)
Q Consensus 112 ~~~~~~~~~~~~~g~~~~--~~~~--------------~~~~~v~~~h~ETstG--v~~~~-------~~~~~~~~~~ll 166 (391)
.+.....+..-|+-...+ .+.+ +.+ |.+=.||+.| -+|.. .+.+|+++|+||
T Consensus 155 aG~~~~~v~~mPYDgY~~~~~D~~~Yfe~~L~D~sSGvd~P---AAvILETVQGEGGiNvAs~eWLq~l~~lCr~~DILL 231 (413)
T TIGR02407 155 AGVPLSNVSRMPYDGYLGGEVDTIAYFEKLLEDSSSGVDLP---AAVILETVQGEGGINVASKEWLQRLEKLCRRHDILL 231 (413)
T ss_pred CCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC---CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 67447782568765577864322899998617888984767---258981103757703123557999999998649868
Q ss_pred EEEECCHHHHCC-----CCCCCC--EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC
Q ss_conf 864011011025-----455685--7999700120017665--1544567788876541144577831232001123210
Q gi|254780153|r 167 ICDATSAVFARH-----IDFNKL--DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME 237 (391)
Q Consensus 167 ivD~vSs~g~~p-----~d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391)
|||=|++=+++- |...+| |+|. --|-|+|- | +|++.++|+. +.++|.
T Consensus 232 IVDDIQaGCGRTG~FFSFE~AgI~PDiVc--LSKSisG~-GLPlal~L~kPe~----D~W~PG----------------- 287 (413)
T TIGR02407 232 IVDDIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGY-GLPLALVLIKPEL----DVWKPG----------------- 287 (413)
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCEEE--EECCCCCC-CHHHHHHHHCCCC----CCCCCC-----------------
T ss_conf 77317418888789645344677566178--50200355-1268999735456----746788-----------------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCEEE-EEECCC
Q ss_conf 33478644666448899999999862010318999999997799999998747971676688-2003653178-982473
Q gi|254780153|r 238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD-ETTRSNTSIC-MKIVDS 315 (391)
Q Consensus 238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~-~~~rS~~~v~-~~~~d~ 315 (391)
+.+.|+ ==+-+++.+..++|+.+=.+ +.+.+..+++++.+.+++++.--- ..... ...|.+.-+. +.+.++
T Consensus 288 --EHNGTF-RGNNlAFVtA~aAL~~yW~D---d~f~~~v~~~s~~~~~~l~~~~~~-~~~~~~~~~RGRGlm~Gl~~~~~ 360 (413)
T TIGR02407 288 --EHNGTF-RGNNLAFVTATAALEYYWSD---DAFEKAVQRKSEIIQERLDEIVAE-FPELIEKSVRGRGLMQGLECGDG 360 (413)
T ss_pred --CCCCCC-CCCCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCEEEECCCCCH
T ss_conf --778864-66527899999999984896---268999999999999999999987-45521311045201420004772
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCC--CCCHHHHHHHHHHHHHHHH
Q ss_conf 1011373456788899999888628287266556767505686158--8899999999999999999
Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGV--TVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g--~i~~~dv~~L~~aLe~~~~ 380 (391)
. ..+++.+..=++|.++.+-|..+.. |=.++ +|++|+++.=++-||.|.+
T Consensus 361 ~-----------~A~~i~~~aF~~GLiiEtsGp~DeV----~K~lPpLTI~~~~L~~GL~IL~~a~~ 412 (413)
T TIGR02407 361 D-----------LAGKIAKAAFENGLIIETSGPEDEV----IKLLPPLTIDEETLQQGLDILEQAVE 412 (413)
T ss_pred H-----------HHHHHHHHHHHCCCEEEEECCCCCE----EEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 4-----------6899999986468389871889845----87038898887889999999999971
No 281
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.39 E-value=0.00022 Score=47.30 Aligned_cols=327 Identities=15% Similarity=0.077 Sum_probs=174.1
Q ss_pred CCCCCCCCC-CC-CCCHHHHHHHHHHHCCC--------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
Q ss_conf 998886888-77-68968999986321036--------532898899999999999999968899857999748734899
Q gi|254780153|r 11 PKRPFFSSG-PC-AKRPGWSLGILEGALLG--------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAV 80 (391)
Q Consensus 11 p~~~~F~pG-P~-~~~p~~v~~~~~~~~l~--------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ 80 (391)
|....|+.| |. ...|...++......+. .+....-+..+-+.+.+.++.-.++.-+-+=+++++|++.++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHH
T ss_conf 75547688998810188899999999998505612332268768889999999999999749988830389806499999
Q ss_pred HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC------CCCEEE-EEEECCCCEEE
Q ss_conf 98753205789707997073688888765323876306740-57776578676785------565799-74202420220
Q gi|254780153|r 81 EMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF------DRDVVF-VWNGTTSGVCV 152 (391)
Q Consensus 81 ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~------~~~v~~-~h~ETstGv~~ 152 (391)
+.+..-++.+||.+++.+=+|..- ...+...+ ..+..+. .+.|. +++.++. .+.+.+ ..+-.-||+.+
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~-~~~~~~~g-~~~~~vp~d~~G~--~~e~le~~~~~~~~k~~y~~P~~qNPtG~tm 244 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGA-LQALEALG-ARVIPVPVDEDGI--DPEALEEALAQWKPKAVYVTPTFQNPTGVTM 244 (459)
T ss_pred HHHHHHHCCCCCEEEECCCCHHHH-HHHHHHCC-CCEEEECCCCCCC--CHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
T ss_conf 999998479999999899982899-99999869-9478606788898--9799999985069728997889638898745
Q ss_pred CCEEE-----ECCCCCCEEEEEECCHHHHC---CCC-CCCC----EEEE-ECCHHCCCCCCCCEEEEECHHHHHHHHHCC
Q ss_conf 32035-----02568614886401101102---545-5685----7999-700120017665154456778887654114
Q gi|254780153|r 153 PDVGF-----IPESREGLVICDATSAVFAR---HID-FNKL----DVVT-FSAQKVLGGEAGFGIIILSPASVERLEKYV 218 (391)
Q Consensus 153 ~~~~~-----~~~~~~~llivD~vSs~g~~---p~d-~~~i----Dv~~-a~sQK~l~~ppGl~~v~~s~~al~~~~~~~ 218 (391)
+.... ++..++..+|=|-.=+.... |.. .-.. -|+| .+.-|.|.--=.+|.+++.++.+++....+
T Consensus 245 s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k 324 (459)
T COG1167 245 SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLK 324 (459)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCHHHHCCCCCEEEECCCHHHHCCCCCEEEEECCHHHHHHHHHHH
T ss_conf 99999999999997598799867743321588998345762899978999132665146755499972999999999998
Q ss_pred CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 45778312320011232103347864466644889999999986201031----89999999977999999987479716
Q gi|254780153|r 219 PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG----LSACVERCNANAAVLFQFIQENDWIE 294 (391)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG----l~~~~~r~~~~a~~l~~~i~~~~~~~ 294 (391)
..+-.+++.+.-.++.. ++. .|+ +..+.+.++++.+.+.+.+.....-.
T Consensus 325 -----------------------~~~~~~~s~~~Q~~la~---~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~ 377 (459)
T COG1167 325 -----------------------QAADLGPSSLSQAALAA---FLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPEL 377 (459)
T ss_pred -----------------------HHHCCCCCHHHHHHHHH---HHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf -----------------------76256998999999999---997-285999999999999999999999999747876
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECC-CCCCC----CCCEEEEECCCCCCHHHHH
Q ss_conf 766882003653178982473101137345678889999988862828726-65567----6750568615888999999
Q gi|254780153|r 295 NLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDI-GSYRD----APLGLRVWVGVTVEKEDLL 369 (391)
Q Consensus 295 ~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~r~----~~~~~RIg~~g~i~~~dv~ 369 (391)
..... -.+-.-+.+.++++.. ...+.....++|+.+.. +..=. ..++||++.... +.++++
T Consensus 378 ~~~~~--p~gG~flwl~l~~~~~-----------~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~-~~e~i~ 443 (459)
T COG1167 378 ATWTR--PEGGLFLWLELPEGID-----------ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP-SEEEIE 443 (459)
T ss_pred EEEEC--CCCEEEEEEECCCCCC-----------HHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCCC-CHHHHH
T ss_conf 37726--9955899998699888-----------899999999869979458866357898898289988989-999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780153|r 370 LLCDWLRWVFYFQ 382 (391)
Q Consensus 370 ~L~~aLe~~~~~~ 382 (391)
..+..|-.+..+.
T Consensus 444 ~gi~~l~~~~~~~ 456 (459)
T COG1167 444 EGIKRLAALLREA 456 (459)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999976
No 282
>KOG2467 consensus
Probab=98.37 E-value=7.5e-05 Score=50.24 Aligned_cols=323 Identities=14% Similarity=0.141 Sum_probs=186.4
Q ss_pred CCHHHHHHHHH-HHHHHHHHHCC-CCCCEEEEECCCCHHHHHHHHHHCCCCCCEE----EEEECCHHHHHHHHHHHCCCC
Q ss_conf 89889999999-99999999688-9985799974873489998753205789707----997073688888765323876
Q gi|254780153|r 42 RCVLGKERINK-AIQLTRKVLEV-PENYRIAIVPASDTGAVEMALWSLLGYRGVD----VLAWESFGLGWMSDIRQLSLQ 115 (391)
Q Consensus 42 Rs~~f~~i~~~-~~~~l~~l~~~-p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~----~~~~g~~~~r~~~~~~~~~~~ 115 (391)
-+.+|.+-++- ++++-.+.|+. |+.|-|-+-+=||+-|.=++-.-++.|++.. +...|.-+.......+++-..
T Consensus 79 GGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~ 158 (477)
T KOG2467 79 GGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISAT 158 (477)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 75357899999999999998099888873330027898305678754148777134035798875556401688542246
Q ss_pred CEEEEECCCCCC-----CCHHHCCCC-----CCEEEEEEECCCC---EEECCEEEECCCCCCEEEEEEC--CHHHH---C
Q ss_conf 306740577765-----786767855-----6579974202420---2203203502568614886401--10110---2
Q gi|254780153|r 116 DVREFTAPYGSL-----PDFSKVDFD-----RDVVFVWNGTTSG---VCVPDVGFIPESREGLVICDAT--SAVFA---R 177 (391)
Q Consensus 116 ~~~~~~~~~g~~-----~~~~~~~~~-----~~v~~~h~ETstG---v~~~~~~~~~~~~~~llivD~v--Ss~g~---~ 177 (391)
-+-..+.|+... .|-+.++.. ..+.++ .||.= ..+.-.+.++...++.+++||. |.+-+ .
T Consensus 159 SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iia--G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vi 236 (477)
T KOG2467 159 SIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIA--GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVI 236 (477)
T ss_pred EEECCCCCEEECCCCCCEEHHHHHHHHHHCCCCEEEE--CCCCCHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCC
T ss_conf 6430048610279878130688888887518737995--36321323138999999875280664135667777752667
Q ss_pred CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 54556857999700120017665154456778887654114457783123200112321033478644666448899999
Q gi|254780153|r 178 HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYI 257 (391)
Q Consensus 178 p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~ 257 (391)
|=+++-+|++-+..+|.|-||-| +++.+++-. . ..++.....-..++. .+.+...+. ..-.-|--+.|.++.
T Consensus 237 psPFey~DiVTTTTHKsLRGPRg-~mIFyRkGv-k---~~~~k~g~~i~ydlE--~kINfaVFP-~lQGGPHNhtIaalA 308 (477)
T KOG2467 237 PSPFEYCDIVTTTTHKSLRGPRG-AMIFYRKGV-K---SIKPKQGKEILYDLE--DKINFAVFP-GLQGGPHNHTIAALA 308 (477)
T ss_pred CCCCCCCCEEECCCCCCCCCCCC-EEEEEECCC-C---CCCCCCCCCCEECHH--HHHHHHCCC-CCCCCCCCCHHHHHH
T ss_conf 99642012464134345568763-168983267-7---678788976401266--530122266-556898733589999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99986201031899999999779999999874797167668820036531789824731011373456788899999888
Q gi|254780153|r 258 DALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLE 337 (391)
Q Consensus 258 ~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~ 337 (391)
.+|++...- ......++..++++.+-+.+.+.+ +.. +..-.. +-.+.+.+.+...+. ...+++... ..+-+
T Consensus 309 vALkQa~tp-efk~Yq~qV~~Nakala~~l~~~G-y~l-vtgGTD--nHlvLvDLr~~G~dG---arvE~vle~-~~I~~ 379 (477)
T KOG2467 309 VALKQAMTP-EFKEYQKQVLKNAKALASALISRG-YKL-VTGGTD--NHLVLVDLRPKGVDG---ARVEKVLEL-CHIAL 379 (477)
T ss_pred HHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEE-ECCCCC--CEEEEEECCCCCCCH---HHHHHHHHH-HHHHH
T ss_conf 999860787-799999999999999999999729-667-407866--527999656467750---899999987-54133
Q ss_pred HCCEEECCCCCCCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 628287266556767505686158----88999999999999999999999
Q gi|254780153|r 338 KEEIAYDIGSYRDAPLGLRVWVGV----TVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 338 ~~g~~~~~~~~r~~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
..|-+.+=+ --..+.|+|||+.. ...++|.+...+.|+.+.+-...
T Consensus 380 NKNtvpGD~-Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~i~~~ 429 (477)
T KOG2467 380 NKNTVPGDK-SALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVKIALE 429 (477)
T ss_pred CCCCCCCCC-CCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 377677874-45588843316612213676688899999999999999999
No 283
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.35 E-value=0.00027 Score=46.74 Aligned_cols=297 Identities=15% Similarity=0.088 Sum_probs=151.8
Q ss_pred HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECCHHH---HHHHHHH----HCCCC---------C
Q ss_conf 9999996889985799974873489998753205--789707997073688---8887653----23876---------3
Q gi|254780153|r 55 QLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWESFGL---GWMSDIR----QLSLQ---------D 116 (391)
Q Consensus 55 ~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~~~~---r~~~~~~----~~~~~---------~ 116 (391)
+.+.+.+..- ..|-| .-|||.|.-.++.=-- ...++++.-.|.|-+ .+.-.+. ..+.. .
T Consensus 100 ell~~~~p~~--e~vrf-vnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a 176 (432)
T COG0001 100 ELLIERVPSI--EKVRF-VNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVA 176 (432)
T ss_pred HHHHHHCCCC--CEEEE-ECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 9999865865--08998-60640899999999987647975999728888871187842676755578999999973453
Q ss_pred EEEEECCCCCCCCHHHC-CC-CCCEEEEEEECC---CCEEECCEE------EECCCCCCEEEEEECCHHHHCCC----CC
Q ss_conf 06740577765786767-85-565799742024---202203203------50256861488640110110254----55
Q gi|254780153|r 117 VREFTAPYGSLPDFSKV-DF-DRDVVFVWNGTT---SGVCVPDVG------FIPESREGLVICDATSAVFARHI----DF 181 (391)
Q Consensus 117 ~~~~~~~~g~~~~~~~~-~~-~~~v~~~h~ETs---tGv~~~~~~------~~~~~~~~llivD~vSs~g~~p~----d~ 181 (391)
.+.+..+++....+++. +. ..+++.|-.|-+ -|+..|..+ .+|++++.++|.|=|=+-...++ +.
T Consensus 177 ~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~ 256 (432)
T COG0001 177 KHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGY 256 (432)
T ss_pred CCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCC
T ss_conf 44788457999999999987689679999542467889898987899999999997194899862212045477642010
Q ss_pred CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 68579997001200176651544567788876541144577831232001123210334786446664488999999998
Q gi|254780153|r 182 NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL 261 (391)
Q Consensus 182 ~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~ 261 (391)
.++.-..+.-.|.+||===++.+..+.+-.+. ..+..+. ....|.+--|+ .+.+-..+|+
T Consensus 257 ~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~---~~p~g~v----------------yqaGT~sgnpl-amaAG~atl~ 316 (432)
T COG0001 257 YGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQ---LAPLGPV----------------YQAGTLSGNPL-AMAAGLATLE 316 (432)
T ss_pred CCCCCCHHHHHHHHCCCCCEEEECCHHHHHHH---HCCCCCC----------------CCCCCCCCCHH-HHHHHHHHHH
T ss_conf 08696333222440477520112569999963---2778876----------------45677788689-9999999999
Q ss_pred HHHCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 6201031-899999999779999999874797167668820036531789824731011373456788899999888628
Q gi|254780153|r 262 WLKKMGG-LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEE 340 (391)
Q Consensus 262 ~i~~~gG-l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g 340 (391)
.+.++.+ .+.+.++-++..+-+.+.+++.+ +...+. ..-|...+.|.-.++.....-..-+......+...+.++|
T Consensus 317 ~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g-~~~~v~--~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~G 393 (432)
T COG0001 317 ELMTEEGVYERLDALGERLAEGLRAAAERHG-IPLTVN--RVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRG 393 (432)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEE--EECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 9873651899999999999999999999839-985886--2042589995589988899998635699999999999688
Q ss_pred EEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 287266556767505686-15888999999999999999999999
Q gi|254780153|r 341 IAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 341 ~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
+.+ .+..|..+ +.-..+++||++.+++++.+|.+.+.
T Consensus 394 V~l-------~ps~~ea~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 394 VYL-------APSQFEAGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred CCC-------CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 234-------77555545520046899999999999999998633
No 284
>TIGR01437 selA_rel pyridoxal phosphate-dependent enzyme, putative; InterPro: IPR006337 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry represents a group of proteins that are related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. .
Probab=98.35 E-value=3.2e-05 Score=52.60 Aligned_cols=327 Identities=13% Similarity=0.095 Sum_probs=193.7
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE--EE
Q ss_conf 8776896899998632103653289889999999999999996889985799974873489998753205789707--99
Q gi|254780153|r 19 GPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVD--VL 96 (391)
Q Consensus 19 GP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~--~~ 96 (391)
|=+.|-|+ |++++...= +| ==+.+++...+=+-+.+++++.+. .+++||+.+.-..+..|++.++.. +.
T Consensus 22 Gvs~Vs~e-v~~a~~~~~---~~-F~em~~ls~~tGe~~ar~lgvEda----yIts~AsAGia~~vAali~~g~~ar~~~ 92 (391)
T TIGR01437 22 GVSKVSDE-VLEATKYVS---DI-FIEMDDLSRKTGEYIARRLGVEDA----YITSGASAGIALAVAALISKGTRARVIK 92 (391)
T ss_pred CCCHHHHH-HHHHHHHHH---HH-CEEHHHHHHHHHHHHHHHHCCCHH----HHHHHHHHHHHHHHHHHHCCCCCCEEEC
T ss_conf 66403699-999987565---51-010899999999999988443067----8898788899999999751676320110
Q ss_pred EE--------------CC---HHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC-CCE-EEEE-EECCCCEEE
Q ss_conf 70--------------73---688888765323876306740577765786767----855-657-9974-202420220
Q gi|254780153|r 97 AW--------------ES---FGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD-RDV-VFVW-NGTTSGVCV 152 (391)
Q Consensus 97 ~~--------------g~---~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~v-~~~h-~ETstGv~~ 152 (391)
.. |+ |+.= .+.+-+.+|..+.... ..+ ......+ ++. +.+ ++-| +.--.++..
T Consensus 93 ~~i~e~g~~~~vv~~rgH~vdyg~P-V~~~i~~gGg~ivE~G-~~n-~~s~~~lE~~I~~kt~aiLyvksh~~vqk~ml~ 169 (391)
T TIGR01437 93 DIIEEKGRKREVVLQRGHNVDYGAP-VEDLIALGGGRIVEVG-DEN-LVSEESLEETIKEKTAAILYVKSHHLVQKDMLL 169 (391)
T ss_pred CHHHCCCCEEEEEEECCCCCCCCCC-HHHHHHCCCCCEEEEC-CCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 1032033400678627874567880-8999961899489977-888-756789999997734675556532135766666
Q ss_pred CCEEE--ECCCCCCEEEEEECCHHHHC-CCC---CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC--CCCC
Q ss_conf 32035--02568614886401101102-545---5685799970012001766515445677888765411445--7783
Q gi|254780153|r 153 PDVGF--IPESREGLVICDATSAVFAR-HID---FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS--WPLP 224 (391)
Q Consensus 153 ~~~~~--~~~~~~~llivD~vSs~g~~-p~d---~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~--~~~~ 224 (391)
|+.+. +++.+..++||||-.-+.-. ++. ..+-|+++-|.-|+|++|+--|+++-+++.+..++...+. ..-|
T Consensus 170 P~~~~~~vA~~~~vPlIVDAAAeiPP~edL~~y~~~GaDlViYSGaKa~~gpsnsGl~vGrK~~I~~~~~~g~gseenGP 249 (391)
T TIGR01437 170 PVEEVIRVAQSYKVPLIVDAAAEIPPEEDLTRYLKAGADLVIYSGAKALEGPSNSGLVVGRKDYIAAAKSQGKGSEENGP 249 (391)
T ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCC
T ss_conf 38999999975689889862568988014689997168755532034504643263233008899999862887656689
Q ss_pred CHH--HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCC
Q ss_conf 123--20011232103347864466644889999999986201031899999999779999999874797-167668820
Q gi|254780153|r 225 KIF--RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW-IENLAVDET 301 (391)
Q Consensus 225 ~~~--~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~-~~~~~~~~~ 301 (391)
+-- -...-+|.. =-.|.++..+++.++. ++=+.+.++.+++.+-+-+.|..... ....+.|+.
T Consensus 250 DGtrvfIgRaMKIg-------------Ke~ivg~v~AvE~yl~-~~~e~~~~k~~~~l~p~a~aIs~i~~l~a~iv~D~a 315 (391)
T TIGR01437 250 DGTRVFIGRAMKIG-------------KENIVGLVAAVERYLT-FNDEDWLRKQRSRLDPIAEAISDIDDLMAKIVQDEA 315 (391)
T ss_pred CCCEEEEECCCCHH-------------HHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
T ss_conf 86568873265103-------------6899999999999851-687267899999843699998524101123567688
Q ss_pred C---CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 0---3653178982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r 302 T---RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 302 ~---rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
. |.--...+++.. ..-....+++...|..+.+.+.+..|+.....|.. ..-.+.++|+...++-|..-
T Consensus 316 gnhPR~i~r~rV~v~~--------~~~Gl~A~eV~~~Lk~~~~aIYtr~YQ~~~G~~~l-dpr~v~e~e~~~Iv~rL~eI 386 (391)
T TIGR01437 316 GNHPRDIYRARVKVDA--------EEGGLSADEVISRLKAERVAIYTREYQLLDGVLEL-DPRSVKEDEMALIVDRLSEI 386 (391)
T ss_pred CCCCCCEEEEEEEEEC--------CCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEEE-CCCCCCCCCHHHHHHHHHHH
T ss_conf 9888543688889822--------22476789999985079995002245544885887-66113614168999989999
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 379 FY 380 (391)
Q Consensus 379 ~~ 380 (391)
..
T Consensus 387 ~~ 388 (391)
T TIGR01437 387 VE 388 (391)
T ss_pred HH
T ss_conf 86
No 285
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.33 E-value=0.0003 Score=46.38 Aligned_cols=335 Identities=13% Similarity=0.063 Sum_probs=156.4
Q ss_pred CCCCCCCCCCCCCCC-CCC--CCHHHHHHHHHHHCCC--------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 556468998886888-776--8968999986321036--------53289889999999999999996889985799974
Q gi|254780153|r 5 RKPTRKPKRPFFSSG-PCA--KRPGWSLGILEGALLG--------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVP 73 (391)
Q Consensus 5 ~~~~~~p~~~~F~pG-P~~--~~p~~v~~~~~~~~l~--------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~ 73 (391)
-.....|+-++|+-| |.- -+|+.+.+++.+.+-. .+--+.=..++-+.+-+.+++-++++-+-+=++++
T Consensus 24 ~~~~~~P~vIsl~~G~P~~~p~~~~~~~~a~~~~l~~~~~~~~~~qY~~~~G~~eLReaIA~~~~~~~g~~~~pd~I~vT 103 (416)
T PRK09440 24 NDGLRTPGAIMLGGGNPAHIPEMEDYFRDLLAELLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPENIALT 103 (416)
T ss_pred HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEC
T ss_conf 99738998488179689888982299999999998468666544788999870999999999999984899983009984
Q ss_pred CCCHHHHHHHHHHCCCCCCE-----EEEE-ECCHHH-HHHHHHH-HCCCCCEEEEECCC---CCCCCHHHCCC---CCCE
Q ss_conf 87348999875320578970-----7997-073688-8887653-23876306740577---76578676785---5657
Q gi|254780153|r 74 ASDTGAVEMALWSLLGYRGV-----DVLA-WESFGL-GWMSDIR-QLSLQDVREFTAPY---GSLPDFSKVDF---DRDV 139 (391)
Q Consensus 74 GsgT~~~ea~~~nl~~~~~~-----~~~~-~g~~~~-r~~~~~~-~~~~~~~~~~~~~~---g~~~~~~~~~~---~~~v 139 (391)
.|++.++..++.-|+.+++. +++. +=.|-. .-+.... ........+...+. ...++++.++. .+.+
T Consensus 104 ~Gaqqal~l~~~~l~~pgd~~~~~~vl~p~~P~Y~~Y~~~~l~~~~~~~~~p~i~~~~~~~~~~~~d~~~l~~~~~t~~i 183 (416)
T PRK09440 104 NGSQSAFFYLFNLFAGRRADGSLKKILLPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLDIDEETGAI 183 (416)
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCEECCCEEEECCCCCCCCCCCHHHHHCCCCCEEE
T ss_conf 87899999999996476788776438972698654447777500650000560576687565678898997177784399
Q ss_pred EEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECCHH-------HHCCCCCCCCEEEEECCHHCCCCCCCC--EEEE
Q ss_conf 997420242022032035-----02568614886401101-------102545568579997001200176651--5445
Q gi|254780153|r 140 VFVWNGTTSGVCVPDVGF-----IPESREGLVICDATSAV-------FARHIDFNKLDVVTFSAQKVLGGEAGF--GIII 205 (391)
Q Consensus 140 ~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs~-------g~~p~d~~~iDv~~a~sQK~l~~ppGl--~~v~ 205 (391)
.++.-..-||...+..+. ++..++.++|.|-+=+. ...+..+.+--+.+.|.-| + +-||+ |.++
T Consensus 184 i~~~P~NPTG~v~s~e~~~~l~~la~~~~i~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK-~-~~pG~RiG~~v 261 (416)
T PRK09440 184 CVSRPTNPTGNVITDEELAKLDALARQHNIPLIIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSK-L-GLPGVRCGIVI 261 (416)
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCC-C-CCCCCCEEEEE
T ss_conf 977898998877889999999999998795899978987778763315567667898899745112-0-28654258996
Q ss_pred ECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH-----HHHHHHHHH
Q ss_conf 677888765411445778312320011232103347864466644889999999986201031899-----999999779
Q gi|254780153|r 206 LSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSA-----CVERCNANA 280 (391)
Q Consensus 206 ~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~-----~~~r~~~~a 280 (391)
..++.++++...+.. ... .++.+.-++....|+ .|.+.. +...++++.
T Consensus 262 ap~~~i~~l~~~~~~----------------------~~~-~~~~~~Q~~a~~~l~----~~~~~~~~~~~~r~~y~~rr 314 (416)
T PRK09440 262 ANEEIIEALTNMNGI----------------------ISL-APGRLGPAIAAELIE----SGDLLRLSETVIRPFYRQKV 314 (416)
T ss_pred CCHHHHHHHHHHHHH----------------------HCC-CCCHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHH
T ss_conf 899999999999976----------------------348-856999999999997----79689999999999999999
Q ss_pred HHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCC------
Q ss_conf 9999998747-971676688200365317898247310113734567888999998886282872665--5676------
Q gi|254780153|r 281 AVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDA------ 351 (391)
Q Consensus 281 ~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~------ 351 (391)
+.+.+.+.+. +.....+..|+ +-.-+-+.+++-.. + ...+...+.++|+++--|. |...
T Consensus 315 ~~~~~~L~~~l~~~~~~~~~P~--Ggff~wv~~p~~~~---~-------~~~l~~~l~e~gV~vvPG~~F~~g~~~~~~~ 382 (416)
T PRK09440 315 QLAIALLRRALPDLPCLIHKPE--GAIFLWLWFKDLPI---T-------TEELYQRLKARGVLIVPGHYFFPGLDEPWPH 382 (416)
T ss_pred HHHHHHHHHHCCCCCEEEECCC--CCEEEEEECCCCCC---C-------HHHHHHHHHHCCEEEEECHHHCCCCCCCCCC
T ss_conf 9999999985789814885798--24699998899998---9-------9999999997997998264317999876557
Q ss_pred C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7-505686158889999999999999999999
Q gi|254780153|r 352 P-LGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 352 ~-~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
+ ..+|++.- .++++|+.-++-|-.+.++.
T Consensus 383 ~~~~lRlsfa--~~~e~i~egi~RLa~~i~~~ 412 (416)
T PRK09440 383 THQCIRMSYV--QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred CCCEEEEEEC--CCHHHHHHHHHHHHHHHHHH
T ss_conf 7886999827--99999999999999999999
No 286
>PRK06855 aminotransferase; Validated
Probab=98.31 E-value=0.00034 Score=46.06 Aligned_cols=253 Identities=10% Similarity=0.056 Sum_probs=130.1
Q ss_pred CHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 968999986321036-5328---988999999999999999688998-57999748734899987532057897079970
Q gi|254780153|r 24 RPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAW 98 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~ 98 (391)
.|+.+.+++...++. .+|+ +.=..++=+.+-+.+++-++++-+ -+|++ +.|++.++.+ ++.++.+|+.+++-+
T Consensus 49 tP~~i~ea~~~a~~~~~~~~Yt~s~G~~eLReaIA~~~~~~~g~~~~pd~I~v-t~Ga~~ai~~-~~~~l~pgdeVlip~ 126 (433)
T PRK06855 49 IPLWMKEIVSELVMDDKSYGYCPTRGVLETREFLAELTNKRGGAQITPDDILF-FNGLGDAIAK-IYGFLRREARVLGPS 126 (433)
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEE-ECCHHHHHHH-HHHHCCCCCEEEECC
T ss_conf 88899999999985899988699888499999999999987399998789889-5776999999-999628999899627
Q ss_pred CCHHHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCCC-------CCEEEEEEECCCCEEECCEE-----EECCCCCCE
Q ss_conf 736888887653238763067-40577765786767855-------65799742024202203203-----502568614
Q gi|254780153|r 99 ESFGLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDFD-------RDVVFVWNGTTSGVCVPDVG-----FIPESREGL 165 (391)
Q Consensus 99 g~~~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~-------~~v~~~h~ETstGv~~~~~~-----~~~~~~~~l 165 (391)
=+|-......+...+...+.. .....+..+++++++.. +.+.+..=..-||...+... .+|.+++..
T Consensus 127 P~Yp~Y~~~~~~~~g~~pv~~~l~~e~~f~~d~e~l~~~i~~~~~~kaiii~nP~NPTG~v~s~e~l~~i~~~a~~~~i~ 206 (433)
T PRK06855 127 PAYSTHSSAEAAHAGCEPVTYRLDPEDNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLF 206 (433)
T ss_pred CCCCCCHHHHHHHCCCEEEEEECCHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 88735099999968986899955710187789999999986699724999838999988667999999999999975986
Q ss_pred EEEEECCHHHHC----CCCC----CCC-EEEEECCHHCCCCCCCCEEEEE------CHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf 886401101102----5455----685-7999700120017665154456------778887654114457783123200
Q gi|254780153|r 166 VICDATSAVFAR----HIDF----NKL-DVVTFSAQKVLGGEAGFGIIIL------SPASVERLEKYVPSWPLPKIFRMV 230 (391)
Q Consensus 166 livD~vSs~g~~----p~d~----~~i-Dv~~a~sQK~l~~ppGl~~v~~------s~~al~~~~~~~~~~~~~~~~~~~ 230 (391)
+|.|-+=.-... +... .++ .+.+-|.-|.++. +|.=+=++ ++..+.+. ..
T Consensus 207 visDEiY~~l~ydg~~~~s~~~~~~~~~~i~~ns~SK~~~m-tGwRiG~~~~~~~~~~~~~~~~--------------~~ 271 (433)
T PRK06855 207 IIADEIYANIVYNGKKTVPLSEVIGDVPGIALKGISKELPW-PGSRCGWIEVYNAEKDPVFKKY--------------IK 271 (433)
T ss_pred EEEECCCCCCEECCCCCCCHHHHCCCCCEEEEEEEHHCCCC-CCCCEEEEEEECCCCHHHHHHH--------------HH
T ss_conf 98631011245489876388996675773798200103897-6312678863157736999999--------------99
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299 (391)
Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~ 299 (391)
...+. ..... .+++..-++...++..-..+.=++.+.+.++++++.+++.+.+.+++....++
T Consensus 272 ~i~~~---~~~~~---cs~~~~Q~a~~a~l~~~~~~~~~~e~~~~y~~RRd~l~~~L~~ipGv~~~~P~ 334 (433)
T PRK06855 272 SILDA---KMIEV---CSTTLPQKAIPAIMSHPEYKPYLEERNSRYEKRSNIAYEYLKDIPGLKVNRTN 334 (433)
T ss_pred HHHHH---HHCCC---CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf 99987---74275---81389999999985598437999999999999999999999569993716997
No 287
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.29 E-value=0.00024 Score=47.05 Aligned_cols=289 Identities=14% Similarity=0.116 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHCCCCCEEEEEC---C-
Q ss_conf 999999999999688998579997487348999875320578970799-70736888887653238763067405---7-
Q gi|254780153|r 49 RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL-AWESFGLGWMSDIRQLSLQDVREFTA---P- 123 (391)
Q Consensus 49 i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~-~~g~~~~r~~~~~~~~~~~~~~~~~~---~- 123 (391)
..+++++..+++|+.... +|+..|-|++..++++.++.+||.+++ -|.+-|.--.-+.+ + +....++. +
T Consensus 71 ~i~eAqe~aA~~fgAd~t---yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glila--G-a~Pvyl~p~~np~ 144 (557)
T COG1982 71 PIKEAQELAARVFGADHT---YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILA--G-ATPVYLEPSRNPL 144 (557)
T ss_pred CHHHHHHHHHHHHCCCCE---EEEECCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC--C-CCEEEECCCCCCC
T ss_conf 388999999998688862---999778228999999860389998996587637888899874--8-8327841777854
Q ss_pred CCCC--CCHHHCCC------CC-CEEEEEEECCCCEEECCEEEE--CCCCCCEEEEEECCHHH--HCC----CCC-CCCE
Q ss_conf 7765--78676785------56-579974202420220320350--25686148864011011--025----455-6857
Q gi|254780153|r 124 YGSL--PDFSKVDF------DR-DVVFVWNGTTSGVCVPDVGFI--PESREGLVICDATSAVF--ARH----IDF-NKLD 185 (391)
Q Consensus 124 ~g~~--~~~~~~~~------~~-~v~~~h~ETstGv~~~~~~~~--~~~~~~llivD~vSs~g--~~p----~d~-~~iD 185 (391)
+|.. .+.+.++. .. ..+++.|.|=.|+..+...++ .+..++.+.+|---.+- -.+ -.. .+.|
T Consensus 145 ~gi~ggI~~~~~~~al~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~ 224 (557)
T COG1982 145 YGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGAD 224 (557)
T ss_pred CCCCCCCCHHHHHHHHHHCHHHHHEEEEECCCCCEEEECHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCHHHHCCCE
T ss_conf 46537869899879998471304068896485324760599999997531866888645774335555574114545743
Q ss_pred EEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 99970012001766515445677888765411445778312320011232103347864466644889999999986201
Q gi|254780153|r 186 VVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKK 265 (391)
Q Consensus 186 v~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~ 265 (391)
++.-|.+|-|++-+--|.+-+... +..+.....++... .+ -|-|-..+.|-..+.+..++
T Consensus 225 ~~tqS~HK~l~alSQaS~iHv~~~---------------~~~~~~r~nea~~~---h~--STSPsY~l~ASlD~Ar~~~~ 284 (557)
T COG1982 225 FVTQSTHKLLAALSQASMIHVKDG---------------RAVNHERFNEALMM---HQ--STSPSYPLMASLDVARMQEG 284 (557)
T ss_pred EEEEEHHHHHHHHHHHHHHHHCCC---------------CCCCHHHHHHHHHH---HC--CCCCHHHHHHHHHHHHHHHH
T ss_conf 898105442123436678750887---------------65778999999998---80--67955899988999998754
Q ss_pred CCCHHHH---HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-----------------CCCCEEEEEECCCCCCCCCHHHH
Q ss_conf 0318999---999997799999998747971676688200-----------------36531789824731011373456
Q gi|254780153|r 266 MGGLSAC---VERCNANAAVLFQFIQENDWIENLAVDETT-----------------RSNTSICMKIVDSDIASLDINSQ 325 (391)
Q Consensus 266 ~gGl~~~---~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~-----------------rS~~~v~~~~~d~~~~~~~~~~~ 325 (391)
..|-.-+ ..+.-+.++.+++.+...+++..+.+++.. -=++=+++.+++ .
T Consensus 285 ~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~----------~ 354 (557)
T COG1982 285 NAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPE----------F 354 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC----------C
T ss_conf 334788888899999999999998876488640266555775332221223445420366079996577----------8
Q ss_pred HHHHHHHHHHHHHCCEEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 78889999988862828726-6556767505686158889999999999999
Q gi|254780153|r 326 KSFCKSMLSFLEKEEIAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 326 ~~~~~~~~~~l~~~g~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+.-...+.++|.+++++..- +-+.. -|=++.+......+|+.|++++.
T Consensus 355 Gipg~~v~~~L~e~gii~e~~~d~~~---lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 355 GIPGAIVAKYLREHGIIPEETGDYSN---LLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred CCCHHHHHHHHHHCCCEEEECCCCEE---EEEEEECCCHHHHHHHHHHHHHH
T ss_conf 97399999999975881453177324---67863241067899999999987
No 288
>KOG1401 consensus
Probab=98.29 E-value=0.00037 Score=45.80 Aligned_cols=325 Identities=16% Similarity=0.038 Sum_probs=173.9
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH-----HCCCC
Q ss_conf 8887768968999986321036532898-89999999999999996889985799974873489998753-----20578
Q gi|254780153|r 17 SSGPCAKRPGWSLGILEGALLGRSHRCV-LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW-----SLLGY 90 (391)
Q Consensus 17 ~pGP~~~~p~~v~~~~~~~~l~~sHRs~-~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~-----nl~~~ 90 (391)
++|++ .|+ +.++|..++...+|-+- .|..=--++.+.|-+..+-+.--+|+| .-|||.|.|+++- +....
T Consensus 69 ~~Gha--npe-v~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff-~nsGTeAne~ALK~Ark~~~~~~ 144 (433)
T KOG1401 69 ILGHA--NPE-VARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFF-CNSGTEANETALKFARKFTGKKH 144 (433)
T ss_pred CCCCC--CHH-HHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEE-ECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 55889--989-999999987553440475320888999999974235687417999-56972899999999998635347
Q ss_pred C-C--EEEEEECCHHHHHHHHHH-----HCCCC----CEEEEECCCCCCCCHHH-CCCCC-CEEEEEEECCCCE--EECC
Q ss_conf 9-7--079970736888887653-----23876----30674057776578676-78556-5799742024202--2032
Q gi|254780153|r 91 R-G--VDVLAWESFGLGWMSDIR-----QLSLQ----DVREFTAPYGSLPDFSK-VDFDR-DVVFVWNGTTSGV--CVPD 154 (391)
Q Consensus 91 ~-~--~~~~~~g~~~~r~~~~~~-----~~~~~----~~~~~~~~~g~~~~~~~-~~~~~-~v~~~h~ETstGv--~~~~ 154 (391)
. + ..+-..|+|-+|-...+. .++.. ..++...+++....+++ ++..+ .++.+-.|-.+|- ..|.
T Consensus 145 ~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~e~~~~~IaAvIvEPiqGaGG~~p~ 224 (433)
T KOG1401 145 PEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPA 224 (433)
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
T ss_conf 76641289985675776236667523466688887779853530558899999999847885689997134578886569
Q ss_pred -------EEEECCCCCCEEEEEECCHHHHCCCCCC-----CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC
Q ss_conf -------0350256861488640110110254556-----8579997001200176651544567788876541144577
Q gi|254780153|r 155 -------VGFIPESREGLVICDATSAVFARHIDFN-----KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 155 -------~~~~~~~~~~llivD~vSs~g~~p~d~~-----~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391)
...+|.++++++|.|=|.+=.++-=+.| ++-=.++...|.|++===++.++++++-.+... +..
T Consensus 225 ~peFl~~l~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~---~~~- 300 (433)
T KOG1401 225 DPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMIS---PGD- 300 (433)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCHHHHHHHHCCCCCEEEEHHHCCCCCEEEEEEEHHHHHHHCC---CCC-
T ss_conf 8899999999986159669960343176535527788885869760231020368851578865577886518---888-
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
+ -..+.|+.-- .....+-..+|+|+...+-+.++-+..+...+.+++.+.+.+-.. .-..
T Consensus 301 ---------~------l~hg~Tf~gn-pLacs~~~~~l~~l~~pe~~k~vs~~~k~L~~~l~e~~~~~~~~i----~g~~ 360 (433)
T KOG1401 301 ---------H------LYHGGTFSGN-PLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSI----CGGV 360 (433)
T ss_pred ---------C------CCCCCCCCCC-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE----EEEE
T ss_conf ---------6------5557665788-055548899999871889999898887899999999864798743----6775
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEC----CCCCCHHHHHHHHHHHHHH
Q ss_conf 365317898247310113734567888999998886282872665567675056861----5888999999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV----GVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~----~g~i~~~dv~~L~~aLe~~ 378 (391)
.+-+++-+....|...-.+. ......+. ...++-....++||-- -...++|+++.+++.+++.
T Consensus 361 grgl~ig~~~~~p~~~~~d~---~~~~~ll~----------~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~k~ 427 (433)
T KOG1401 361 GRGLVIGFEFEGPVYKFADA---AREQGLLI----------LTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKV 427 (433)
T ss_pred EEEEEEEEEEECCHHHHHHH---HHHHHHHH----------HHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 25889989983050543013---44556888----------876324622517995552010568689999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 379 FYFQ 382 (391)
Q Consensus 379 ~~~~ 382 (391)
....
T Consensus 428 l~~l 431 (433)
T KOG1401 428 LSAL 431 (433)
T ss_pred HHHH
T ss_conf 9874
No 289
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=98.25 E-value=0.00045 Score=45.32 Aligned_cols=301 Identities=15% Similarity=0.027 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-C--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 99999999999999968899857999748734899987532057-8--97079970736888887653238763067405
Q gi|254780153|r 46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-Y--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTA 122 (391)
Q Consensus 46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~ 122 (391)
..+.+=+-+..+.+|.+.+=.. .=++ -+||.+-||+.|..-- + +.++++...-+-+.+.-.-......+..+...
T Consensus 108 ~LqalfefQtmi~eLTGmdvaN-ASly-D~aTA~aEA~~ma~r~~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~~ 185 (429)
T pfam02347 108 RLEALLNFQTMVCDLTGLDVAN-ASLL-DEGTAAAEAMALAARISKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVEV 185 (429)
T ss_pred HHHHHHHHHHHHHHHHCCCCCC-CCCC-CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9999999999999985887568-7666-6788999999998765157887799828878318999997542279579996
Q ss_pred CCCCCCCHHHCC-CCCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEE--EECCHHHHC-CCCCCCCEEEEECCH----
Q ss_conf 777657867678-55657997420242022032035--02568614886--401101102-545568579997001----
Q gi|254780153|r 123 PYGSLPDFSKVD-FDRDVVFVWNGTTSGVCVPDVGF--IPESREGLVIC--DATSAVFAR-HIDFNKLDVVTFSAQ---- 192 (391)
Q Consensus 123 ~~g~~~~~~~~~-~~~~v~~~h~ETstGv~~~~~~~--~~~~~~~lliv--D~vSs~g~~-p~d~~~iDv~~a~sQ---- 192 (391)
+.... ...+ ......++.+=+..|+.-+..++ ++|+.++++|| |-.| ++.. +=-.++.|+++..+|
T Consensus 186 ~~~~~---~~~~~~~~a~v~~q~Pn~~G~ied~~~i~~~~h~~gal~iv~~dpls-L~ll~~Pg~~GaDI~vG~~Q~lGi 261 (429)
T pfam02347 186 DLTEE---GFSDEGDVFGVLVQYPNTEGRIEDYKELIEIAHQHGSLVVVAADLLA-LTILKPPGEFGADIVVGSAQRFGV 261 (429)
T ss_pred CCCCC---CCCCCCCEEEEEEECCCCCCCEECCHHHHHHHHHCCCEEEEEECHHH-HCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 72001---45555476899993799983172349999998645966999807799-607689765663379725765788
Q ss_pred -HCCCCCCCCEEEEECHHHHHHHHHCC----CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHC
Q ss_conf -20017665154456778887654114----45778312320011232103347864466644889999999--986201
Q gi|254780153|r 193 -KVLGGEAGFGIIILSPASVERLEKYV----PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDA--LLWLKK 265 (391)
Q Consensus 193 -K~l~~ppGl~~v~~s~~al~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~--l~~i~~ 265 (391)
.++|| |.+++...+++...+....- ....--.-+.+....+...-.+..-|-|.-.-..+.++..+ +-|+=.
T Consensus 262 pm~fGG-P~~gf~a~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~Y~~~~Gp 340 (429)
T pfam02347 262 PMGYGG-PHAGFFAVKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 340 (429)
T ss_pred CCCCCC-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
T ss_conf 878898-8200154488899749976446775889987336541243430334442034650089999999999998697
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECC
Q ss_conf 03189999999977999999987479716766882003653178982473101137345678889999988862828726
Q gi|254780153|r 266 MGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDI 345 (391)
Q Consensus 266 ~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 345 (391)
.|+..+.+++..++..+.+.+.+.+++.. ..+.+. .++ +.... +. ..+.+.+.....|+ ++
T Consensus 341 -~GL~~iA~~~~~~A~yl~~~L~~~~g~~~--~~~~Ff-d~v-~~~~~-~~-----------~~~~l~~~~i~~G~--~l 401 (429)
T pfam02347 341 -KGLKEIARRIHSLTLYLAKGLKKLAGHEL--DHDHFF-DTL-KITVE-DR-----------AAEELLKRAEKGGI--NL 401 (429)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHCCCEEC--CCCCCC-CEE-EEECC-CH-----------HHHHHHHHHHHCCC--CE
T ss_conf -88999999999999999999986699766--799962-159-99628-27-----------89999999997799--73
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 65567675056861588899999999999
Q gi|254780153|r 346 GSYRDAPLGLRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 346 ~~~r~~~~~~RIg~~g~i~~~dv~~L~~a 374 (391)
. +...+ .+-|+.-=..+.+||++|+++
T Consensus 402 ~-~~~~~-~~li~vtE~~T~edId~Lv~~ 428 (429)
T pfam02347 402 R-YVDLG-TVGIALDETTTKEDVDALLKV 428 (429)
T ss_pred E-ECCCC-EEEEEECCCCCHHHHHHHHHH
T ss_conf 6-53899-499996479999999999975
No 290
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase; InterPro: IPR006238 This group of sequences represent cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys..
Probab=98.25 E-value=9.5e-05 Score=49.59 Aligned_cols=216 Identities=18% Similarity=0.224 Sum_probs=132.7
Q ss_pred CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--HCCCCCC----EEEEEECCHHH--HHHHHHHH
Q ss_conf 289-889999999999999996889985799974873489998753--2057897----07997073688--88876532
Q gi|254780153|r 41 HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW--SLLGYRG----VDVLAWESFGL--GWMSDIRQ 111 (391)
Q Consensus 41 HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~--nl~~~~~----~~~~~~g~~~~--r~~~~~~~ 111 (391)
-|| .+=...++ ..|.+|.++|.+ .++. =+||-+|.+++.. -++++|| .++.-..-||+ |....+..
T Consensus 44 sRSGNPTR~~Le---~~~AkL~~aPq~-~al~-~sSGMaAL~~~~~Glv~L~~GdnhtP~i~AgdDlYGG~~RLL~~~~~ 118 (415)
T TIGR01329 44 SRSGNPTRTALE---SLLAKLEKAPQE-RALA-VSSGMAALDVITRGLVLLNAGDNHTPEIIAGDDLYGGTDRLLTQLAS 118 (415)
T ss_pred CCCCCHHHHHHH---HHHHHHHCCCCC-CEEE-EECCHHHHHHHHHEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf 468980478999---998865127535-3588-86136799886411456607888677078437456504789999743
Q ss_pred CCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEE-----ECCCCC--CEEEEE--ECCHHHHCC
Q ss_conf 3876306740577765786767----855657997420242022032035-----025686--148864--011011025
Q gi|254780153|r 112 LSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGF-----IPESRE--GLVICD--ATSAVFARH 178 (391)
Q Consensus 112 ~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~--~llivD--~vSs~g~~p 178 (391)
.-+..+..+... +++++ ...+.+.++|-||-|==+..+..+ .+|..+ ++++|| ++|-+.+.|
T Consensus 119 ~~G~vv~~V~t~-----~~d~v~~~l~~~P~~~lv~LESPTNPl~~ivDI~~i~~~ah~~~~~~~V~vDNtmmSPl~c~P 193 (415)
T TIGR01329 119 RSGVVVVHVDTT-----DLDKVKAVLGDLPKTKLVLLESPTNPLIKIVDIRKIAEAAHALNEDALVVVDNTMMSPLLCNP 193 (415)
T ss_pred CCCEEEEECCCC-----CHHHHHHHHHCCCHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf 285289974898-----879999986068712076503888986246337899999985089718998222047667887
Q ss_pred CCC-CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC--CHHHH
Q ss_conf 455-68579997001200176651--54456778887654114457783123200112321033478644666--44889
Q gi|254780153|r 179 IDF-NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP--SLLCI 253 (391)
Q Consensus 179 ~d~-~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP--~v~~i 253 (391)
++- -++|++|=|+=|=|.|-.=+ |+++++...+.+. -||- +|.. |.-. .| ...++
T Consensus 194 L~LnPGaD~v~~SATKfL~GH~D~MaGvl~~k~e~~~~~----------~yF~--------~Ns~-G~gL-aP~DswLLl 253 (415)
T TIGR01329 194 LELNPGADIVYESATKFLAGHSDVMAGVLAVKSEEIAKK----------VYFL--------INST-GAGL-APFDSWLLL 253 (415)
T ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHH----------EEEE--------ECCC-CCCC-CHHHHHHHH
T ss_conf 566789757863534201464011335577737121000----------1112--------3366-7766-513589998
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 9999999862010318999999997799999998747971676
Q gi|254780153|r 254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391)
Q Consensus 254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391)
++++ .+.-|.+|.++||..+-.||+++-+|.+.
T Consensus 254 RGik----------TLaiR~ekQq~NA~~iA~fL~nsCGfkP~ 286 (415)
T TIGR01329 254 RGIK----------TLAIRLEKQQENAVAIALFLENSCGFKPT 286 (415)
T ss_pred HHHH----------HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 6688----------88887989999999999986321688866
No 291
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.24 E-value=0.0003 Score=46.44 Aligned_cols=287 Identities=16% Similarity=0.129 Sum_probs=142.7
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCC-CEEEEEECC
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205-789-707997073
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYR-GVDVLAWES 100 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~-~~~~~~~g~ 100 (391)
+|+ +.+++.+++=...|-++.|. +...+..+.|.++. ++.-+++..|||.+.|+++.=.. -.+ ..++...++
T Consensus 42 ~p~-i~~ai~~ql~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~v~f~~SGseAve~AiklAr~~tgr~~ii~~~~~ 116 (364)
T PRK04013 42 HPE-WVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV----NYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNA 116 (364)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC----CCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 889-99999999975576577636589999999975257----9788996388469999999998762799989996488
Q ss_pred HHHHHHHHHHHCCCCCEE---------EEECCCCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC------EEEECC
Q ss_conf 688888765323876306---------7405777657867678--556579974202420---22032------035025
Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD------VGFIPE 160 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~------~~~~~~ 160 (391)
|=++-..-...-+..... ....|+ .+.+... ..+.++.+-.|...| +..+. .+.+|+
T Consensus 117 yHG~t~g~ls~~~~~~~~~~~~~~~~~~~~~p~---~d~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~ 193 (364)
T PRK04013 117 FHGRTMGALSATWKPKYREDFEPLVPGFKHIPF---NDVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTE 193 (364)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC---CCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 677866633445773334577899887055576---43999998726673599997677788862487799999999999
Q ss_pred CCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 686148864011011025---4--55685--7999700120017665--1544567788876541144577831232001
Q gi|254780153|r 161 SREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 161 ~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
++++++|+|=|.+-. +- + +.+++ |++ ..-|+|++ | ++.++.+.+. ..
T Consensus 194 ~~gillI~DEV~tGf-RtG~~~a~e~~gv~PDiv--~~gKglgg--G~Pl~av~~~~~i-------~~------------ 249 (364)
T PRK04013 194 DVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIV--TMGKGIGN--GVPVSLTLTNFDV-------ER------------ 249 (364)
T ss_pred HCCCCEECCCCCCCC-CCCCCCHHHCCCCCCCEE--EECCCCCC--CCCCEEEEECCCC-------CC------------
T ss_conf 769976710230360-434302311589999899--96340008--8651899964101-------13------------
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf 123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M 310 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~ 310 (391)
...++|+.--|+. ..+..++|+.++++ ++-. |..++ +.+ +.. ..+. +.|...... +
T Consensus 250 -------~~h~~T~~Gnp~~-~aaa~a~L~ii~~e-~l~~---~~~~~---~~~-~~~-----~~v~--~vRG~GL~~gi 306 (364)
T PRK04013 250 -------GKHGSTFGGNPLA-CKAVAVTLRILRRE-RLVE---KAGEK---FIE-IKG-----ERVV--TTRGRGLMIGI 306 (364)
T ss_pred -------CCCCCCCCCCHHH-HHHHHHHHHHHHHC-HHHH---HHHHH---HHH-HCC-----CCEE--EEECCCEEEEE
T ss_conf -------7656755889899-99999999999866-3999---99999---998-565-----7008--98615379999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
.+..| ...+...+.++|+++...+. ..+|+.--=.++.++++.++++||.++.+.
T Consensus 307 e~~~p-------------~~~~~~~~~~~G~l~~~~g~----~virl~PPL~it~~eid~~~~~l~~al~ev 361 (364)
T PRK04013 307 VLKKP-------------VGKYVEELQNRGYLVHTAGQ----RVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred EECCC-------------HHHHHHHHHHCCEEEEECCC----CEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 97784-------------89999999959969963799----989998881378999999999999999998
No 292
>KOG1357 consensus
Probab=98.23 E-value=0.00019 Score=47.73 Aligned_cols=316 Identities=18% Similarity=0.157 Sum_probs=171.2
Q ss_pred CCCCCCCCHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
Q ss_conf 8887768968999986321036--53289889999999999999996889985799974873489998753205789707
Q gi|254780153|r 17 SSGPCAKRPGWSLGILEGALLG--RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVD 94 (391)
Q Consensus 17 ~pGP~~~~p~~v~~~~~~~~l~--~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~ 94 (391)
+.||+. |. +.+++..--+. -||+..--.++.+++.+...++++.|+ -++|-+|=|| ..+.+..|++++...
T Consensus 152 ~~g~ca--~~-~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~--a~vF~mGf~T--Ns~~~p~l~~~gsLI 224 (519)
T KOG1357 152 SVGPCA--EA-SLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVED--AIVFSMGFAT--NSMNIPSLLGKGSLI 224 (519)
T ss_pred CCCCCC--HH-HHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCC--EEEEECCCCC--CCCCCCEEECCCCCE
T ss_conf 688776--18-9999998463336642003637888789999998668864--4897415434--556762244588616
Q ss_pred EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC--------------CCCCCEEEEEEEC-CCC--EEECCEEE
Q ss_conf 997073688888765323876306740577765786767--------------8556579974202-420--22032035
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV--------------DFDRDVVFVWNGT-TSG--VCVPDVGF 157 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------------~~~~~v~~~h~ET-stG--v~~~~~~~ 157 (391)
+.. ..-.--..--++.-++.+.+.+- +...+++.+ +..+.+.++-+=- -.| +..|....
T Consensus 225 iSD--elNHaSi~~GaRLSgAtiRVfkH--Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vva 300 (519)
T KOG1357 225 ISD--ELNHASLITGARLSGATTRVFRH--NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVA 300 (519)
T ss_pred EEH--HCCCHHEEECCCCCCCEEEEEEC--CCHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCEECCCHHHHH
T ss_conf 440--00330023030315854799863--88777999999887527877688502203420110105672116199887
Q ss_pred ECCCCCCEEEEEECCHHHHCC-----------CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf 025686148864011011025-----------455685799970012001766515445677888765411445778312
Q gi|254780153|r 158 IPESREGLVICDATSAVFARH-----------IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 158 ~~~~~~~llivD~vSs~g~~p-----------~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
+++++.+.+..|.-+|+|+++ .|...+|++-...-|-+++-. +.+.-|++..+.......
T Consensus 301 lkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G--Gyiagsk~lid~lrt~s~------- 371 (519)
T KOG1357 301 LKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG--GYIAGSKELIDYLRTPSP------- 371 (519)
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHEEECCEEHHHCCCCC--CEECCCHHHHHHCCCCCC-------
T ss_conf 52043379984010002553788874223468882462022010021045666--600283887741004788-------
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103---189999999977999999987479716766882003
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG---GLSACVERCNANAAVLFQFIQENDWIENLAVDETTR 303 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g---Gl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r 303 (391)
... ..+.-.||+ .-....+++-|..+- +.....+|-.++++.++..+...+ +..+- ..-
T Consensus 372 --~~~----------yat~~sppv--aqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-fivyG---~~d 433 (519)
T KOG1357 372 --SAL----------YATSLSPPV--AQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG-FIVYG---NND 433 (519)
T ss_pred --CEE----------ECCCCCHHH--HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-EEEEC---CCC
T ss_conf --424----------203678288--999998787524887640779999998750289987510482-89916---788
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC---CEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6531789824731011373456788899999888628287266556767---5056861588899999999999999999
Q gi|254780153|r 304 SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP---LGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 304 S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~---~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
|+++-.+....+.+ ..+...+.++++++=..++.--+ .-.|.=.--..+.||++.|+++++.+-.
T Consensus 434 SpVvplll~~~~k~------------~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357 434 SPVVPLLLYGPAKI------------VAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred CCCCEEEECCCCCC------------CHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCH
T ss_conf 87643663275314------------078999986473599972799457776778654235557889999998866331
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 381 FQ 382 (391)
Q Consensus 381 ~~ 382 (391)
.+
T Consensus 502 ~~ 503 (519)
T KOG1357 502 ED 503 (519)
T ss_pred HH
T ss_conf 12
No 293
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.22 E-value=0.00052 Score=44.87 Aligned_cols=313 Identities=12% Similarity=0.100 Sum_probs=166.3
Q ss_pred CCCCCCCCCCC-------CCCCHHHHHHHHHHHCCCC--CC------CCHHHHHHHHHHHHHHHHHHCCC-----CCCEE
Q ss_conf 89988868887-------7689689999863210365--32------89889999999999999996889-----98579
Q gi|254780153|r 10 KPKRPFFSSGP-------CAKRPGWSLGILEGALLGR--SH------RCVLGKERINKAIQLTRKVLEVP-----ENYRI 69 (391)
Q Consensus 10 ~p~~~~F~pGP-------~~~~p~~v~~~~~~~~l~~--sH------Rs~~f~~i~~~~~~~l~~l~~~p-----~~y~v 69 (391)
-|...|-+.|- +.+.|. |.++- ..+++. +| =.++|.+...+.. |+-. ++.-+
T Consensus 25 ~p~KvnLgvGvYrde~G~~~vl~a-Vk~Ae-~~l~~~~~~k~Ylpi~G~~~f~~~~~~L~------fG~~~~~~~~~rv~ 96 (397)
T PRK09257 25 RPDKVNLGVGVYKDEQGRTPVLRA-VKKAE-ARLLETETTKSYLPIEGLAAYNQAVQELL------FGADSPAIAAGRVA 96 (397)
T ss_pred CCCCEEEEEEEEECCCCCCCCCHH-HHHHH-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH------CCCCCHHHHHCCEE
T ss_conf 967477302378999989166579-99999-99973789987879787799999999984------27875566625258
Q ss_pred EEECCCCHHHHHHHHH--HCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHC----C--CCCCE
Q ss_conf 9974873489998753--205789707997073688888765323876306740--577765786767----8--55657
Q gi|254780153|r 70 AIVPASDTGAVEMALW--SLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKV----D--FDRDV 139 (391)
Q Consensus 70 ~~l~GsgT~~~ea~~~--nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~----~--~~~~v 139 (391)
-+-+-|||||.-...- +-..++..+++.+=.|++.. .++...+. .+..+. .+.....+++.. . ...++
T Consensus 97 ~vQt~gGTGAlrl~a~fl~~~~p~~~v~is~PtW~Nh~-~If~~aGl-~v~~Y~y~d~~t~~ldf~~~~~~L~~a~~gsv 174 (397)
T PRK09257 97 TVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHR-AIFEAAGL-EVKTYPYYDAATKGLDFDGMLADLSQAPAGDV 174 (397)
T ss_pred EEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH-HHHHHCCC-EEEEEEEECCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf 88547753689999999998589986997699962038-99997798-05776556454576289999999982899998
Q ss_pred EEEEE--ECCCCEEECCEEE-----ECCCCCCEEEEEEC-CHHHHC-CCCC--------CCCEEEE-ECCHHCCCCC---
Q ss_conf 99742--0242022032035-----02568614886401-101102-5455--------6857999-7001200176---
Q gi|254780153|r 140 VFVWN--GTTSGVCVPDVGF-----IPESREGLVICDAT-SAVFAR-HIDF--------NKLDVVT-FSAQKVLGGE--- 198 (391)
Q Consensus 140 ~~~h~--ETstGv~~~~~~~-----~~~~~~~llivD~v-Ss~g~~-p~d~--------~~iDv~~-a~sQK~l~~p--- 198 (391)
.+.|. -.-||+.....++ +...++.+.++|+. ..|++- +=|. ....+++ .|.-||||.-
T Consensus 175 vlLh~ccHNPTG~D~t~eqW~~ia~~~~~k~l~p~~D~AYqGf~sGl~~Da~~iR~f~~~~~e~lva~SfSKnfgLY~eR 254 (397)
T PRK09257 175 VLLHGCCHNPTGADLTPEQWDEVAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRLFAAAGLELLVASSFSKNFGLYGER 254 (397)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
T ss_conf 99725667988999899999999999996698688840014334668999999999997288579984037543334677
Q ss_pred -CCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHCCCCHH
Q ss_conf -65154456778887654114457783123200112321033478644666448899999999-------8620103189
Q gi|254780153|r 199 -AGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-------LWLKKMGGLS 270 (391)
Q Consensus 199 -pGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-------~~i~~~gGl~ 270 (391)
.-+.++.-+++..++.... +... -..++..||.++-......| +|.+ | ++
T Consensus 255 vG~l~vv~~~~~~~~~v~s~-----------l~~~--------~R~~~S~PP~hGA~iv~~IL~d~~L~~~W~~-E--l~ 312 (397)
T PRK09257 255 VGALSVVAEDAEEAARVLSQ-----------LKAT--------IRTNYSNPPAHGAAIVATILNDPELRAEWEQ-E--LA 312 (397)
T ss_pred CEEEEEEECCHHHHHHHHHH-----------HHHH--------HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH-H--HH
T ss_conf 50389981888899999999-----------9999--------9734588983899999999679999999999-9--99
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf 99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD 350 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~ 350 (391)
.|..|...+++.+++.+.+.+.-..+..-... .--|-+.. +. ..-+..|.++-.+|-++
T Consensus 313 ~m~~Ri~~~R~~L~~~L~~~~~~~~w~~i~~q----~GmFs~~g-----ls--------~~qv~~Lr~~~~IYl~~---- 371 (397)
T PRK09257 313 EMRDRIKAMRQLLVEALKAKGPDRDFSFILRQ----RGMFSYSG-----LT--------PEQVDRLREEFGIYAVG---- 371 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC----CCEEECCC-----CC--------HHHHHHHHHHCCEEECC----
T ss_conf 99999999999999999975899996267507----66056689-----79--------99999999847251469----
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 67505686158889999999999999999
Q gi|254780153|r 351 APLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 351 ~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
+-||++-| +++.+|+.+.+||+.+.
T Consensus 372 ---~GRIniaG-Ln~~ni~~vA~AI~~V~ 396 (397)
T PRK09257 372 ---SGRINVAG-LNEDNIDYVAKAIAAVL 396 (397)
T ss_pred ---CCEEEEEC-CCHHHHHHHHHHHHHHH
T ss_conf ---95689820-77663899999999985
No 294
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.22 E-value=0.00054 Score=44.81 Aligned_cols=329 Identities=11% Similarity=0.046 Sum_probs=155.2
Q ss_pred CCCCCCCCC-CCCCHHHHHHHHHHHCCC--C---CCC-CH--HHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHH
Q ss_conf 988868887-768968999986321036--5---328-98--8999999999999999688998-579997487348999
Q gi|254780153|r 12 KRPFFSSGP-CAKRPGWSLGILEGALLG--R---SHR-CV--LGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVE 81 (391)
Q Consensus 12 ~~~~F~pGP-~~~~p~~v~~~~~~~~l~--~---sHR-s~--~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~e 81 (391)
+=.+|+-|= .--.|..|.+++..++-+ . +|+ ++ =-.++-+.+-+.+++-+++.-+ .+|++ +.|+..++-
T Consensus 35 dvI~L~iGePdf~tP~~i~eA~~~a~~~~~~~~~~~gYt~~~G~~eLReAIa~~~~~~~g~~~~~~~I~v-t~Ga~~~l~ 113 (409)
T PRK07590 35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDIDAEEIFV-SDGAKCDTG 113 (409)
T ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEE-CCCHHHHHH
T ss_conf 8667889897899999999999999983012688785898747499999999999998489987688687-486799999
Q ss_pred HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCC-CEEEEECCC------------CCCCCHHHCCCCCCEEEEEEECCC
Q ss_conf 8753205789707997073688888765323876-306740577------------765786767855657997420242
Q gi|254780153|r 82 MALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQ-DVREFTAPY------------GSLPDFSKVDFDRDVVFVWNGTTS 148 (391)
Q Consensus 82 a~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~-~~~~~~~~~------------g~~~~~~~~~~~~~v~~~h~ETst 148 (391)
+ ++.++++||.+++-+=+|-... ...+..+. .+......+ +..+++. .+..+.+.++.=..-|
T Consensus 114 ~-i~~ll~pGDeViip~P~Yp~Y~--~~~~laG~~~~~~~~~~~~~~~~~~~~~e~~f~~~~~-~~ktk~iilnsP~NPT 189 (409)
T PRK07590 114 N-ILDIFGPDNTIAVTDPVYPVYV--DTNVMAGRTGEANEDGRYEGIVYLPCTAENNFIPELP-SEKVDIIYLCFPNNPT 189 (409)
T ss_pred H-HHHHHCCCCEEEECCCCCCCHH--HHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCC-CCCEEEEEECCCCCCC
T ss_conf 9-9998399998996688774469--8998748853013566556724655883435474356-5460299984898995
Q ss_pred CEEECCEEE-----ECCCCCCEEEEEECCH-HHH---CCC-----C-CCCCEEEEECCHHCCCCCCC--CEEEEECHHHH
Q ss_conf 022032035-----0256861488640110-110---254-----5-56857999700120017665--15445677888
Q gi|254780153|r 149 GVCVPDVGF-----IPESREGLVICDATSA-VFA---RHI-----D-FNKLDVVTFSAQKVLGGEAG--FGIIILSPASV 211 (391)
Q Consensus 149 Gv~~~~~~~-----~~~~~~~llivD~vSs-~g~---~p~-----d-~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al 211 (391)
|...+..+. +|.+++..+|.|-+=+ +.. .|. + ..+.-+.+.|.-|.++ .+| +|.++..+...
T Consensus 190 G~V~s~eel~~i~~~a~~~~i~iisDEiY~~~~~~~~~p~si~~~~~~~~~~I~i~s~SK~~~-mtGwRiG~~v~P~~l~ 268 (409)
T PRK07590 190 GTVATKEQLKAWVDYAKANGSLILFDAAYEAFISDPSIPHSIYEIEGAKECAIEFRSFSKNAG-FTGTRCAYTVVPKELK 268 (409)
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECHHHCC-CCCCCEEEEECCHHHH
T ss_conf 655799999999999987497899707620013689877577654655014689713526407-8644369897579999
Q ss_pred HHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 76541144577831232001123210334786446664488999999998620103189999999977999999987479
Q gi|254780153|r 212 ERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND 291 (391)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~ 291 (391)
.+..... ..++.... +.....+.+..|+..-++...++..- .+.-++.+.+.++++++.+++.+...+
T Consensus 269 ~~~~~~~-------~~~~~~~~----~~~~~~~~~~~~~~~Q~aa~a~l~~~-~~~~~~~~~~~y~~rr~~~~~~L~~~g 336 (409)
T PRK07590 269 GKDSEGE-------IVDLNSLW----NRRQSTKFNGVSYIVQRGAEAVYSPE-GQAQIKELISYYMENAKIIREGLEAAG 336 (409)
T ss_pred HHHHHHH-------HHHHHHHH----HHHHHCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8864446-------99999999----98750255786899999999996548-789999999999999999999999759
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHH
Q ss_conf 71676688200365317898247310113734567888999998-886282872665-5676750-56861588899999
Q gi|254780153|r 292 WIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDL 368 (391)
Q Consensus 292 ~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv 368 (391)
+.... +.. +. -+-+.+++ . .+ ..++... +.+.|+++--|. +...|.+ +|++.- .+.+++
T Consensus 337 -~~~~~--p~g-af-Y~w~~~~~-~---~~-------~~ef~~~Ll~e~~Vav~PG~~FG~~g~g~vRls~a--~~~e~l 398 (409)
T PRK07590 337 -FTVYG--GVN-AP-YIWVKTPD-G---LS-------SWDFFDKLLQEANVVGTPGSGFGPAGEGYFRLSAF--GSRENV 398 (409)
T ss_pred -CEEEC--CCC-CE-EEEEECCC-C---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHH
T ss_conf -76727--997-23-89888999-9---89-------89999999986999996864658999896999972--899999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780153|r 369 LLLCDWLR 376 (391)
Q Consensus 369 ~~L~~aLe 376 (391)
+.-++-|+
T Consensus 399 ~ea~~Ri~ 406 (409)
T PRK07590 399 LEAMERIK 406 (409)
T ss_pred HHHHHHHH
T ss_conf 99999999
No 295
>KOG1368 consensus
Probab=98.21 E-value=0.0004 Score=45.60 Aligned_cols=308 Identities=16% Similarity=0.151 Sum_probs=160.8
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH-HCCCCCCEEEEEECC
Q ss_conf 6896899998632103653289889999999999999996889985799974873489998753-205789707997073
Q gi|254780153|r 22 AKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW-SLLGYRGVDVLAWES 100 (391)
Q Consensus 22 ~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~-nl~~~~~~~~~~~g~ 100 (391)
.+|-..+.++|..+..|-- =..-..-..+......++|+-.. -+|.+ |||.+.-.+++ .+..++...++-.-.
T Consensus 32 T~PTdeMr~am~eA~vgDd--VyGeD~tt~rLE~~vA~l~GKEA---gLFv~-SGTmgNllaIm~Hc~~rg~eii~gd~~ 105 (384)
T KOG1368 32 TVPTDEMRRAMAEASVGDD--VYGEDPTTNRLEQRVAELFGKEA---GLFVP-SGTMGNLLAIMVHCHQRGSEIIVGDRA 105 (384)
T ss_pred CCCHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHHHHHHCCCC---EEEEC-CCCCCCHHHHHHHHCCCCCEEEECCCH
T ss_conf 6875999999864534752--13678518899999999847541---25632-665310788878744888557843610
Q ss_pred HHHHH-HHHHHHCCCCCEEEEECCCCCCCCHHHCCCC----C-C--------EEE--EEEECCCCEEECCEEE-----EC
Q ss_conf 68888-8765323876306740577765786767855----6-5--------799--7420242022032035-----02
Q gi|254780153|r 101 FGLGW-MSDIRQLSLQDVREFTAPYGSLPDFSKVDFD----R-D--------VVF--VWNGTTSGVCVPDVGF-----IP 159 (391)
Q Consensus 101 ~~~r~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~-~--------v~~--~h~ETstGv~~~~~~~-----~~ 159 (391)
.=.+| ..-+....+..+..++...+-..++++++.. + + +++ +||. +-|...|++.. ++
T Consensus 106 HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~-~Gg~vlPle~~~~v~~la 184 (384)
T KOG1368 106 HIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNN-CGGKVLPLEELDRVKALA 184 (384)
T ss_pred HEEEHHCCCHHHHCCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC-CCCEEEEHHHHHHHHHHH
T ss_conf 3212121672110461467543179975569999876218999735897317986213135-686674199999999999
Q ss_pred CCCCCEEEEEECCHH-----HHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHH
Q ss_conf 568614886401101-----102545--5685799970012001766515445677888765411445778312320011
Q gi|254780153|r 160 ESREGLVICDATSAV-----FARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKG 232 (391)
Q Consensus 160 ~~~~~llivD~vSs~-----g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~ 232 (391)
+.++..+=+|+.--+ .+.|+. ...+|-+-.+-.|.||.|-| ++++-|++.+++..-....
T Consensus 185 k~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA~~~RKa------------ 251 (384)
T KOG1368 185 KRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKARHFRKA------------ 251 (384)
T ss_pred HCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC-CEEECCHHHHHHHHHHHHH------------
T ss_conf 615971533626665578771998999987632424355355788740-1787528899998999997------------
Q ss_pred HHHHCCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 232103347864466--644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r 233 GRVMEGLFCGETINT--PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391)
Q Consensus 233 ~~~~~~~~~~~~~~T--P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391)
.-|.++.. -+...++++++. +....+-|+ +++.+-+.+.+.+.+..-+ +...++++..
T Consensus 252 -------lGGGmRQsGvLaaaaLval~~~---------~~~L~~dHk-~A~~lAe~~~~~~~i~v~v--~a~etNiv~~- 311 (384)
T KOG1368 252 -------LGGGMRQSGVLAAAALVALDEN---------VPLLRADHK-RAKELAEYINTPEEIRVEV--PAVETNIVNM- 311 (384)
T ss_pred -------HCCCHHHHHHHHHHHHHHHHCC---------HHHHHHHHH-HHHHHHHHHCCCCCEEEEC--CHHHCCEEEE-
T ss_conf -------5686137779999889876312---------277787799-9999999864666634632--2131233211-
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8247310113734567888999998886282872665567675056861588899999999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391)
.+..+.+ -...+.+.+.+.|+.+- ++ +-.-+||.....++++||+.++.+++-.|-.++
T Consensus 312 ~l~q~~~----------~~~~l~~~~~k~gi~lm-~~---~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368 312 VLCQARL----------TAEELCKFLEKNGILLM-GG---ASRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred ECCCCCC----------CHHHHHHHHHHCCEEEE-EC---CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 1025667----------89999988987785886-14---666248999984378999999999999998525
No 296
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636 This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=98.21 E-value=0.00056 Score=44.68 Aligned_cols=310 Identities=16% Similarity=0.126 Sum_probs=192.6
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCC----CCCEEEEECCCCHHHHHHHHHH---CC---C-CC
Q ss_conf 9689999863210365328988999-9999999999996889----9857999748734899987532---05---7-89
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVP----ENYRIAIVPASDTGAVEMALWS---LL---G-YR 91 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p----~~y~v~~l~GsgT~~~ea~~~n---l~---~-~~ 91 (391)
+|. +.|++..++=--.|-|.-|.. -..++-+.|-++...- |..+|+|.. |||.|+||++== .. . .+
T Consensus 47 hP~-l~Ea~~~Q~~kL~H~SNlY~~~~~~~LA~kLv~~~~~dgGqhd~~rvFFCN-SGaEAnEAAlKlARk~~~~~g~~k 124 (402)
T TIGR00707 47 HPK-LVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGADGGQHDASRVFFCN-SGAEANEAALKLARKYTGDKGKEK 124 (402)
T ss_pred CHH-HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC-CHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 889-999999866240660776558089999999999970468830232667514-747899999999898640227886
Q ss_pred CEEEEEECCHHHHHHHHHHHCCCCCEEEEE---------CCCCC-CCCHHH-CCCC--CC-EEEEEEECCCC--EEECC-
Q ss_conf 707997073688888765323876306740---------57776-578676-7855--65-79974202420--22032-
Q gi|254780153|r 92 GVDVLAWESFGLGWMSDIRQLSLQDVREFT---------APYGS-LPDFSK-VDFD--RD-VVFVWNGTTSG--VCVPD- 154 (391)
Q Consensus 92 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~---------~~~g~-~~~~~~-~~~~--~~-v~~~h~ETstG--v~~~~- 154 (391)
...+.-.+.|=+|-+.-++.-++....... .+++. +..+++ ++.. .+ ++-+-.|+..| -.+|.
T Consensus 125 ~~ivaf~naFHGRT~g~LsaTgqpKy~~~F~PLvpgf~y~~yNDe~~~l~~~i~~~~eg~rtAAvivEpiQGEgGV~pa~ 204 (402)
T TIGR00707 125 KKIVAFENAFHGRTMGALSATGQPKYQKPFEPLVPGFKYVPYNDEIEALKEAIDDEKEGDRTAAVIVEPIQGEGGVVPAD 204 (402)
T ss_pred CEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC
T ss_conf 53888870776300454300477645685788423812444889789999985025778718899985321786533487
Q ss_pred ------EEEECCCCCCEEEEEECCHHHHCCCC-----CCC--CEEEEECCHHCCCC-CCCCEEEEECHHHHHHHHHCCCC
Q ss_conf ------03502568614886401101102545-----568--57999700120017-66515445677888765411445
Q gi|254780153|r 155 ------VGFIPESREGLVICDATSAVFARHID-----FNK--LDVVTFSAQKVLGG-EAGFGIIILSPASVERLEKYVPS 220 (391)
Q Consensus 155 ------~~~~~~~~~~llivD~vSs~g~~p~d-----~~~--iDv~~a~sQK~l~~-ppGl~~v~~s~~al~~~~~~~~~ 220 (391)
.+.+|.++++|||+|=|++=.++-=. --+ +.=.+..+-|+||+ -| ++.++++++.-+. .
T Consensus 205 ~~fL~a~r~lc~~~~~LLI~DEVQtG~GRTG~~fA~~Hygse~~PDi~T~AKgLGgG~P-iGA~~~~e~~a~~---~--- 277 (402)
T TIGR00707 205 KEFLKALRELCEDKDALLIFDEVQTGLGRTGKLFAYEHYGSEVEPDIITLAKGLGGGVP-IGAVLAKEEVAEA---L--- 277 (402)
T ss_pred HHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCH-HHHHEEHHHHHHH---C---
T ss_conf 78999999998648918999447528774332233120688455238754055527820-2232023678731---5---
Q ss_pred CCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCC
Q ss_conf 778312320011232103347864466644889999999986201031899999999779999999874797167-6688
Q gi|254780153|r 221 WPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN-LAVD 299 (391)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~-~~~~ 299 (391)
.-...|+|+.==|. +..|...+|+.|++++=+++..++ .+.+.+.|+...--.. ++
T Consensus 278 ----------------~~G~HGsTFGGNPL-Ac~Aa~~vl~~i~~~~~l~~v~~~----G~~f~~~L~~~~~~~~~l~-- 334 (402)
T TIGR00707 278 ----------------TPGDHGSTFGGNPL-ACAAALAVLEVIEKERLLEKVKEK----GDYFKERLEELIKKYIDLI-- 334 (402)
T ss_pred ----------------CCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHHCCCCCCCE--
T ss_conf ----------------89898666787389-999987766655051047899998----8999999998617766740--
Q ss_pred CCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 2003653178-982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r 300 ETTRSNTSIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 300 ~~~rS~~~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
++.|....+. +.+..+. ...+++++.+.+.|..+-..+ ++.+|.--==.|+++.|+..+++|+.+
T Consensus 335 k~VRG~GLmlG~e~~~~~----------~~a~~~~~~a~~~GlLv~~Ag----~~v~Rf~PPL~i~~e~i~~~~~~l~~~ 400 (402)
T TIGR00707 335 KEVRGKGLMLGIELEAPS----------VAAKDIVKEAREKGLLVNTAG----PKVLRFVPPLIITEEEIDEAVDALEEA 400 (402)
T ss_pred EEEECCEEEEEEEECCCC----------CCHHHHHHHHHHCCCEEECCC----CCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 153231234655642786----------558999999984892688178----870661578644588999999999998
Q ss_pred H
Q ss_conf 9
Q gi|254780153|r 379 F 379 (391)
Q Consensus 379 ~ 379 (391)
+
T Consensus 401 ~ 401 (402)
T TIGR00707 401 I 401 (402)
T ss_pred H
T ss_conf 2
No 297
>pfam00202 Aminotran_3 Aminotransferase class-III.
Probab=98.19 E-value=0.00014 Score=48.44 Aligned_cols=235 Identities=12% Similarity=0.065 Sum_probs=122.4
Q ss_pred CHHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCC-CE
Q ss_conf 96899998632103653--289889999999999999996889985799974873489998753205-------789-70
Q gi|254780153|r 24 RPGWSLGILEGALLGRS--HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYR-GV 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~s--HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~-~~ 93 (391)
+|+ |.+++.+++-..+ ++..-..+...+.-+.|.+++.. ++..+++.-|||.|+|+++.--. .++ ..
T Consensus 34 ~p~-i~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~l~~~~p~--~~~~v~f~~sGseA~e~AiklAr~~~~~~g~t~r~~ 110 (338)
T pfam00202 34 HPK-IVQAVKEQADKLTHTSFRAFTTEPALQLAEKLAQLTPG--GLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTK 110 (338)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 599-99999999953898566755888999999999985788--868799828768999999999999777537899887
Q ss_pred EEEEECCHHHHHHHHHHHCCCC---------CEEEEECCCCCCCCHHH-------------CCCCCCEEEEEEECCCC--
Q ss_conf 7997073688888765323876---------30674057776578676-------------78556579974202420--
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQ---------DVREFTAPYGSLPDFSK-------------VDFDRDVVFVWNGTTSG-- 149 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~---------~~~~~~~~~g~~~~~~~-------------~~~~~~v~~~h~ETstG-- 149 (391)
++...|+|=++-..-..--+.. .......|+........ ....+.++.+-.|...|
T Consensus 111 il~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaaviiEPi~g~~ 190 (338)
T pfam00202 111 IIAFSGGFHGRTLGALSVTGSSGYKKGFGPSLPGVYFLPYPDLEAAEEELACADEALRLIKAVHDDNIAAVIVEPIQGEG 190 (338)
T ss_pred EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 99993882588730588158855555677899994574899735420015668999999998589977999998877889
Q ss_pred -EEECC------EEEECCCCCCEEEEEECCH-HHHC--CC--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHH
Q ss_conf -22032------0350256861488640110-1102--54--55685--7999700120017665154456778887654
Q gi|254780153|r 150 -VCVPD------VGFIPESREGLVICDATSA-VFAR--HI--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLE 215 (391)
Q Consensus 150 -v~~~~------~~~~~~~~~~llivD~vSs-~g~~--p~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~ 215 (391)
+..+. ...+|+++++++|+|=|.+ ||-. -+ +.+++ |++..| |+|++===++.++.+++..+...
T Consensus 191 G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~gv~PDiv~~g--K~l~~G~P~sav~~~~~i~~~~~ 268 (338)
T pfam00202 191 GVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLFACEHYGVTPDIMTLA--KALTGGLPLSAVLATAEIMQAFH 268 (338)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCHHHHCCCCCEEEEEC--CCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 9767987999999999743277576453100877534874023249887599956--42458998753116477997177
Q ss_pred HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 114457783123200112321033478644666448899999999862010318999999997799999998747
Q gi|254780153|r 216 KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN 290 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~ 290 (391)
....++|++.-|+ ...+..++|+.+++++ ..++.+++.+.+.+.++++
T Consensus 269 ----------------------~~~~~~T~~g~p~-~~aaa~a~L~~l~~~~----l~~~~~~~g~~l~~~L~~l 316 (338)
T pfam00202 269 ----------------------PGSHGGTFGGNPL-ACAAALAVLDIIEDEN----LLQNAQEKGDYLRKGLLAL 316 (338)
T ss_pred ----------------------CCCCCCCCCHHHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHH
T ss_conf ----------------------9995877766499-9999999999996558----9999999999999999985
No 298
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.17 E-value=0.00067 Score=44.20 Aligned_cols=306 Identities=16% Similarity=0.086 Sum_probs=153.1
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 8886888776-8968999986321036532898--89999999999999996889-98579997487348999875320-
Q gi|254780153|r 13 RPFFSSGPCA-KRPGWSLGILEGALLGRSHRCV--LGKERINKAIQLTRKVLEVP-ENYRIAIVPASDTGAVEMALWSL- 87 (391)
Q Consensus 13 ~~~F~pGP~~-~~p~~v~~~~~~~~l~~sHRs~--~f~~i~~~~~~~l~~l~~~p-~~y~v~~l~GsgT~~~ea~~~nl- 87 (391)
=.+|+-|=-. -.|..|++++.... +.+|=++ -..++-+.+.+.+++-++.. .+-+-++++.|++.++..+...+
T Consensus 29 vI~l~iG~Pd~p~P~~v~~a~~~a~-~~~~Y~~~~G~~~LReAIa~~~~~~~g~~~~~~~~V~vt~Ga~~~l~~l~~~l~ 107 (364)
T PRK07865 29 IVDLSVGTPVDPVPPVIQEALAAAA-DAPGYPTTAGTPELREAIVAWLARRYGVTGLDPAAVLPVIGSKELVAWLPTLLG 107 (364)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHC
T ss_conf 3985698998998999999999624-899989988879999999999999839898996879976988999999999970
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-CC-EEEEEEECCCCEEECCEEE-----ECC
Q ss_conf 5789707997073688888765323876306740577765786767855-65-7997420242022032035-----025
Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-RD-VVFVWNGTTSGVCVPDVGF-----IPE 160 (391)
Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~-v~~~h~ETstGv~~~~~~~-----~~~ 160 (391)
+++||.+++-+=.|-.. ....+..+..+... ..+.++... .. +.++.=..-||...+..+. +|.
T Consensus 108 ~~pGD~Vlip~P~Yp~y--~~~~~~~g~~~v~~-------d~~~~~~~~~~~li~lnsP~NPTG~v~s~e~l~~l~~la~ 178 (364)
T PRK07865 108 LGPGDVVVVPELAYPTY--EVGARLAGATVVRA-------DSLTELGPQTPALIWLNSPSNPTGRVLGVDHLRKVVAWAR 178 (364)
T ss_pred CCCCCEEEECCCCCCHH--HHHHHHCCCEEEEC-------CCHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 79999899866786019--99999819865610-------7887759877529998999698551176999999999977
Q ss_pred CCCCEEEEEECCHHH---HCCCC--------CCCCE-EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf 686148864011011---02545--------56857-9997001200176651--5445677888765411445778312
Q gi|254780153|r 161 SREGLVICDATSAVF---ARHID--------FNKLD-VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 161 ~~~~llivD~vSs~g---~~p~d--------~~~iD-v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
.++.++|.|-+=+-. +.+.. .+.-. +++.|.-|.++. ||+ |.++..++.+++....+.
T Consensus 179 ~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~-~GlRiG~i~~~~~li~~l~~~~~------- 250 (364)
T PRK07865 179 ERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNL-AGYRAGFVAGDPALVAELLAVRK------- 250 (364)
T ss_pred HCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCC-CCCEEEEEECCHHHHHHHHHHHH-------
T ss_conf 6718998254257642589886513864427775757999436523067-77448999679999999999998-------
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391)
.....+| ...-++...+|+. ..-+....++++++...+.+.++..+ +... .++ .
T Consensus 251 ---------------~~~~~~~-~~~Q~a~~aal~~---~~~~~~~~~~y~~rr~~l~~~L~~~g-~~~~--~p~----G 304 (364)
T PRK07865 251 ---------------HAGMMVP-APVQAAMVAALGD---DAHVREQRERYARRRAVLLPALEAAG-FTVD--HSE----A 304 (364)
T ss_pred ---------------HCCCCCC-HHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC--CCC----C
T ss_conf ---------------5502378-9999999999579---39999999999999999999998679-7662--699----2
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHH
Q ss_conf 17898247310113734567888999998886282872665-5676750-568615888999999999999
Q gi|254780153|r 307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aL 375 (391)
...+-+..+. + ..+....|.+.|+++--|. +...|.+ +|++.. .++++++.-++-|
T Consensus 305 ~fylw~~~~~----~-------~~~~~~~l~e~gV~v~PG~~Fg~~g~~~vRls~~--~~~e~l~ea~~RL 362 (364)
T PRK07865 305 GLYLWATRGE----D-------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERL 362 (364)
T ss_pred EEEEEEECCC----C-------HHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEC--CCHHHHHHHHHHH
T ss_conf 2799888899----9-------9999999997998991887436899986999965--9899999999986
No 299
>KOG3846 consensus
Probab=98.12 E-value=0.00079 Score=43.75 Aligned_cols=329 Identities=16% Similarity=0.080 Sum_probs=191.1
Q ss_pred CCCC--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC---EEEEEECCHHHHHHHH--HHHC
Q ss_conf 3289--8899999999999999968899857999748734899987532057897---0799707368888876--5323
Q gi|254780153|r 40 SHRC--VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG---VDVLAWESFGLGWMSD--IRQL 112 (391)
Q Consensus 40 sHRs--~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~---~~~~~~g~~~~r~~~~--~~~~ 112 (391)
+|-+ -+...+=+-+...++.+-++.++ +|.++. |=|.-....+.++.+|.. +.++..+.|-..-... ..+.
T Consensus 101 gH~~GkvPW~~~De~il~l~~~iVGA~e~-EvavmN-sLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~l 178 (465)
T KOG3846 101 GHFKGKVPWVSIDEPILPLLAPIVGAQEN-EVAVMN-SLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKL 178 (465)
T ss_pred CCCCCCCCEEECCHHHHHHHHHHCCCCCH-HHHHHH-HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 01146666145562465543443067701-444575-5666899999885078604633100047788417888756523
Q ss_pred CCCCE----EEEECCCCCCCC-----HHHCCCCCC----EEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHC
Q ss_conf 87630----674057776578-----676785565----7997420242022032035--02568614886401101102
Q gi|254780153|r 113 SLQDV----REFTAPYGSLPD-----FSKVDFDRD----VVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFAR 177 (391)
Q Consensus 113 ~~~~~----~~~~~~~g~~~~-----~~~~~~~~~----v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~ 177 (391)
++..+ ..++...|+..- ++-++...+ |++...---||-.+++-++ ..+..++++=.|-.-++|..
T Consensus 179 hG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNV 258 (465)
T KOG3846 179 HGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNV 258 (465)
T ss_pred CCCCHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCCHHHHHHCCCCCCCEECHHHHHHHCCC
T ss_conf 57875782377345666310107879999973687699999505244225322414433213578847622256453577
Q ss_pred CC--CCCCCEEEEECCHHCCC-CCCCCEEEEECHHHHHHHHHCCCCCCC---CCHHHCCHHHHHHCCCCCCCCCCCCCHH
Q ss_conf 54--55685799970012001-766515445677888765411445778---3123200112321033478644666448
Q gi|254780153|r 178 HI--DFNKLDVVTFSAQKVLG-GEAGFGIIILSPASVERLEKYVPSWPL---PKIFRMVKGGRVMEGLFCGETINTPSLL 251 (391)
Q Consensus 178 p~--d~~~iDv~~a~sQK~l~-~ppGl~~v~~s~~al~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~TP~v~ 251 (391)
|+ .+|++|...-+|-|-+. |+.|++-+.+-++-.......-..|+. ..-|.+..-.+.... .-|.-...||+.
T Consensus 259 pL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipG-a~GfRiSNPpi~ 337 (465)
T KOG3846 259 PLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPG-ALGFRISNPPII 337 (465)
T ss_pred CEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEHHHHCCHHHHHHHHCCCCCCHHHHHCCCCCCCCC-CCCCCCCCCCHH
T ss_conf 5277615776477742011356887522256425432102167750214780034300120355764-112113798473
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEEEECCCC---CCCCCHHHHHH
Q ss_conf 8999999998620103189999999977999999987479716-7668820036531789824731---01137345678
Q gi|254780153|r 252 CIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE-NLAVDETTRSNTSICMKIVDSD---IASLDINSQKS 327 (391)
Q Consensus 252 ~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~-~~~~~~~~rS~~~v~~~~~d~~---~~~~~~~~~~~ 327 (391)
.+.+++.+|+.+. +..+++..+|.--....+...++.+.+.. +...++ ..+++..|... .+-+.... ..
T Consensus 338 ~v~al~~SLe~F~-q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~K-----l~~~IiTP~~~~erGcQLsl~F-ss 410 (465)
T KOG3846 338 DVVALRSSLELFA-QFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEK-----LFFTIITPTSTDERGCQLSLYF-SS 410 (465)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC-----EEEEEECCCCCCCCCCEEEEEE-CC
T ss_conf 7998876699998-853998865344677689999987416676002216-----1599847864144564699996-79
Q ss_pred HHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8899999888628287266556767505686158-889999999999999999999
Q gi|254780153|r 328 FCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGV-TVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 328 ~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g-~i~~~dv~~L~~aLe~~~~~~ 382 (391)
-...+.+.|.+.|++.+ +. .+++||+.--+ +.+-.||-..+++|..+...+
T Consensus 411 p~~~vfqeL~krGv~~D-kR---~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846 411 PTPKVFQELHKRGVIGD-KR---RPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred CCHHHHHHHHHCCEECC-CC---CCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 95188999987370132-55---888328614200001899999999999999875
No 300
>pfam03841 SelA L-seryl-tRNA selenium transferase.
Probab=98.07 E-value=0.0007 Score=44.08 Aligned_cols=187 Identities=19% Similarity=0.202 Sum_probs=105.4
Q ss_pred CCCCCCHHHHHHHHHHHCCC---------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 87768968999986321036---------532898899999999999999968899857999748734899987532057
Q gi|254780153|r 19 GPCAKRPGWSLGILEGALLG---------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391)
Q Consensus 19 GP~~~~p~~v~~~~~~~~l~---------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391)
|=++++|+ +.+++....-+ ..-|+. -+..+.+.|+++.+..+ .++... ...++--++..|.
T Consensus 14 GRa~l~~~-a~~a~~~~~~~y~nLE~dl~~g~RG~----R~~~~~~ll~~ltgaE~---a~vVNn-nAaAv~L~l~~la- 83 (367)
T pfam03841 14 GRALLSEE-AVEAAKEAARHYSNLEYDLESGKRGS----RDSHLEELLCELTGAED---ALVVNN-NAAAVLLVLNTLA- 83 (367)
T ss_pred CCCCCCHH-HHHHHHHHHCCCCHHHHHHHHCCCCC----HHHHHHHHHHHHHCCCE---EEEECC-CHHHHHHHHHHHH-
T ss_conf 77789999-99999998617720366674177663----57899999998639865---999878-3899999999875-
Q ss_pred CCCEEEEEECC---H--HHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHH-CCCCC-CEEEEE--EECCCCE----EECCE
Q ss_conf 89707997073---6--88888765323876306740-57776578676-78556-579974--2024202----20320
Q gi|254780153|r 90 YRGVDVLAWES---F--GLGWMSDIRQLSLQDVREFT-APYGSLPDFSK-VDFDR-DVVFVW--NGTTSGV----CVPDV 155 (391)
Q Consensus 90 ~~~~~~~~~g~---~--~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~-~~~~~-~v~~~h--~ETstGv----~~~~~ 155 (391)
.+..+++.-|. . +-|.-+.+.+ .+.....+. ..-+...|.+. +...+ .+..|| |=...|. ...+.
T Consensus 84 ~g~evivSRGelVeiGgsfRiPdim~~-sGa~LvEVGtTNrT~l~DYe~AI~e~Ta~llkVH~SN~~i~GFt~~v~~~el 162 (367)
T pfam03841 84 QGKEVIISRGELVEIGGSFRIPDIMKQ-SGARLVEVGTTNRTHLKDYEQAINENTALLMKVHTSNYRIQGFTKEVSLAEL 162 (367)
T ss_pred CCCCEEEECCEEECCCCCCCCHHHHHH-CCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCHHHH
T ss_conf 489057755545123875440899996-5978998256688898999987082461899994265122374677999999
Q ss_pred EEECCCCCCEEEEEECCHHH---------HCCC--C--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC
Q ss_conf 35025686148864011011---------0254--5--5685799970012001766515445677888765411
Q gi|254780153|r 156 GFIPESREGLVICDATSAVF---------ARHI--D--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY 217 (391)
Q Consensus 156 ~~~~~~~~~llivD~vSs~g---------~~p~--d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~ 217 (391)
..+++.++.++++|.=|... .+|- + ..+.|++.+|.-|-|||| .-|+++-++++++++.+.
T Consensus 163 ~~la~~~~ip~i~DlGSG~l~d~~~~gl~~Ep~v~~~l~~GaDlV~FSGDKLLGGP-QAGII~Gkk~lI~~ikkn 236 (367)
T pfam03841 163 VALGKEHGLPVYYDLGSGSLVDLSQYGLPKEPTVQELLALGVDLVSFSGDKLLGGP-QAGIIVGKKELIERLKKN 236 (367)
T ss_pred HHHHHHCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC-CCCEEEECHHHHHHHHHC
T ss_conf 99998769967997586631122001799999899999739988998676456898-532476459999974647
No 301
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.06 E-value=0.00055 Score=44.74 Aligned_cols=214 Identities=21% Similarity=0.241 Sum_probs=120.5
Q ss_pred CCCCCHHHHHHHHHHHC-----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
Q ss_conf 77689689999863210-----3653289889999999999999996889985799974873489998753205789707
Q gi|254780153|r 20 PCAKRPGWSLGILEGAL-----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVD 94 (391)
Q Consensus 20 P~~~~p~~v~~~~~~~~-----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~ 94 (391)
=+-+.|+ .++++...+ |+.+--+..+.+-...+. ..++++.....++++ +.-+.+...++..+..+++++
T Consensus 36 ~s~~~~e-~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~---~~~~~~~~aea~~iv-nnn~aAVll~~~al~~~~EvV 110 (395)
T COG1921 36 RSLYSPE-AIEAMKEAMRAPVELETDLKTGKRGARLTELA---ELLCGLTGAEAAAIV-NNNAAAVLLTLNALAEGKEVV 110 (395)
T ss_pred CCCCCHH-HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH---HHHHCCCCHHHEEEE-CCCHHHHHHHHHHHCCCCEEE
T ss_conf 7667989-99999998505430356401231357779999---998366440332567-882899999876320577179
Q ss_pred E----EEE-CCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHH-HCCCC-CCEEEEEEEC--CCCEEECC--EEEECCCC
Q ss_conf 9----970-7368888876532387630674-05777657867-67855-6579974202--42022032--03502568
Q gi|254780153|r 95 V----LAW-ESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFS-KVDFD-RDVVFVWNGT--TSGVCVPD--VGFIPESR 162 (391)
Q Consensus 95 ~----~~~-g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~-~~~~~-~~v~~~h~ET--stGv~~~~--~~~~~~~~ 162 (391)
+ .+. |+| + ..++.+..+...... +.......+.+ .+... +....||++. -+|. .+. ...++|.+
T Consensus 111 is~g~lV~gg~~--~-v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV~s~~~~f~~~-l~~~~l~~ia~~~ 186 (395)
T COG1921 111 VSRGELVEGGAF--R-VPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTALLLKVHSSNYGFTGM-LSEEELVEIAHEK 186 (395)
T ss_pred EECCCCCCCCCC--C-HHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCC-CCHHHHHHHHHHC
T ss_conf 971311568899--8-66799971977998156576778889988545870589995036661464-5599999999876
Q ss_pred CCEEEEEECCHHHHC------CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 614886401101102------54556857999700120017665154456778887654114457783123200112321
Q gi|254780153|r 163 EGLVICDATSAVFAR------HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 163 ~~llivD~vSs~g~~------p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
+.++++|.-|..... ++-..+.|++.+|.-|-|+||- -|+++-+++.+++.+...-. +-+.-
T Consensus 187 ~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~lq~~~l~----Ralrv------- 254 (395)
T COG1921 187 GLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEKLQSHPLK----RALRV------- 254 (395)
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEECCHHCCCCC-CCEEECHHHHHHHHHHHHHH----HHHHC-------
T ss_conf 9977996677630035544568886079789975401127985-43374249999999762133----43315-------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 033478644666448899999999862010
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKM 266 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~ 266 (391)
-++ .+.++..+|+.++..
T Consensus 255 ----------~K~--tla~l~~aLe~y~~~ 272 (395)
T COG1921 255 ----------DKE--TLAALEAALELYLQP 272 (395)
T ss_pred ----------CCH--HHHHHHHHHHHHCCC
T ss_conf ----------827--689999999987080
No 302
>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=98.06 E-value=3.1e-05 Score=52.69 Aligned_cols=209 Identities=23% Similarity=0.273 Sum_probs=134.3
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH--HHHHHHHCCCCCEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736888--8876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG--WMSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r--~~~~~~~~~~~~~~~~ 120 (391)
|.+-.++++ +++..+. .-|..+-+|||-+|+.|+++++++-||.++..++-||=- +.++.....++++..+
T Consensus 57 gNPTv~~LE------~riA~LE-g~EAavAt~SGMgAi~A~l~~~lkAgDh~i~d~~lYGCTfall~~~ltkfgi~v~f~ 129 (392)
T TIGR01328 57 GNPTVDLLE------RRIAELE-GAEAAVATASGMGAIAATLLSLLKAGDHVISDETLYGCTFALLEDALTKFGIDVKFV 129 (392)
T ss_pred CCCHHHHHH------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEE
T ss_conf 771377888------8987542-046778875128999999999985287577438742014899873267737527983
Q ss_pred ECCCCCCCCHHHC--CCCCCEEEEEEECCCCEEECCEEE--------ECCCCC-CEEEEEECCH--HHHCCCCCCCCEEE
Q ss_conf 0577765786767--855657997420242022032035--------025686-1488640110--11025455685799
Q gi|254780153|r 121 TAPYGSLPDFSKV--DFDRDVVFVWNGTTSGVCVPDVGF--------IPESRE-GLVICDATSA--VFARHIDFNKLDVV 187 (391)
Q Consensus 121 ~~~~g~~~~~~~~--~~~~~v~~~h~ETstGv~~~~~~~--------~~~~~~-~llivD~vSs--~g~~p~d~~~iDv~ 187 (391)
.-. .++++ ...+.-.+++.||- .||...+ ++|..+ +++|||=+=+ ....|++. ++|++
T Consensus 130 ~~~-----~pee~~a~i~dnT~ivYfETP---aNPtm~liD~e~v~r~A~~~gG~kVivDNTfatP~lt~P~al-G~D~V 200 (392)
T TIGR01328 130 DMA-----SPEEVKAAIKDNTKIVYFETP---ANPTMKLIDLELVVRVAHEKGGVKVIVDNTFATPYLTRPVAL-GVDVV 200 (392)
T ss_pred CCC-----CHHHHHHHCCCCCEEEEEECC---CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCHHHC-CCCEE
T ss_conf 178-----779999844899779998659---987525775999999997529828998566277001380361-87768
Q ss_pred EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 97001200176651--5445677888765411445778312320011232103347864466644889999999986201
Q gi|254780153|r 188 TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKK 265 (391)
Q Consensus 188 ~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~ 265 (391)
+=|+=|=|+|-.=+ |+++-..+.++++.....+ |+ .|+ |-.=+..=+.|+-++
T Consensus 201 VHSATKYigGHgDvVaG~~~G~~e~~q~iR~~g~K-------D~-----------tG~------ViSPfdAwL~lRGLk- 255 (392)
T TIGR01328 201 VHSATKYIGGHGDVVAGVLIGDAELLQRIRLVGVK-------DM-----------TGA------VISPFDAWLVLRGLK- 255 (392)
T ss_pred EECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCC-------CC-----------CCC------EECHHHHHHHHHHHH-
T ss_conf 94241213761221122110775667440111100-------05-----------665------005578999974366-
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 03189999999977999999987479716
Q gi|254780153|r 266 MGGLSACVERCNANAAVLFQFIQENDWIE 294 (391)
Q Consensus 266 ~gGl~~~~~r~~~~a~~l~~~i~~~~~~~ 294 (391)
.|.-|-+||-++|+.+-+||+.++-.+
T Consensus 256 --TL~~RM~rhsenA~kvAe~Lk~HPaVe 282 (392)
T TIGR01328 256 --TLAVRMKRHSENAEKVAEYLKEHPAVE 282 (392)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf --777888773053899999852388602
No 303
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.03 E-value=0.0013 Score=42.42 Aligned_cols=307 Identities=17% Similarity=0.069 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 9999999999999996889985799974873489998753205-78--97079970736888887653238763067405
Q gi|254780153|r 46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTA 122 (391)
Q Consensus 46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~ 122 (391)
..+.+=+-+..+.+|.+.+=.. .-++. +||.+=||+.+..- .+ .++.++.-..+-+...-.-.+..+....+...
T Consensus 118 rLqaLfefQtlv~dLTGm~VAN-ASm~D-eaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~ 195 (450)
T COG0403 118 RLEALFEFQTLVADLTGLDVAN-ASMLD-EATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV 195 (450)
T ss_pred HHHHHHHHHHHHHHHHCCCCCC-CHHHH-HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEE
T ss_conf 9999998999999985887445-00231-676999999999874147673499668868779999986112576399995
Q ss_pred CCCCCCCHHHCCCCCC--EEEEEEECCCCEEEC-CEEE--ECCCCCCEEEE--EECCHHHHCCCCCCCCEEEEECCHHCC
Q ss_conf 7776578676785565--799742024202203-2035--02568614886--401101102545568579997001200
Q gi|254780153|r 123 PYGSLPDFSKVDFDRD--VVFVWNGTTSGVCVP-DVGF--IPESREGLVIC--DATSAVFARHIDFNKLDVVTFSAQKVL 195 (391)
Q Consensus 123 ~~g~~~~~~~~~~~~~--v~~~h~ETstGv~~~-~~~~--~~~~~~~lliv--D~vSs~g~~p~d~~~iDv~~a~sQK~l 195 (391)
++....+++.. ...+ .+++..=+..|+..+ ...+ .+|.++++++| |-+|--.-.|=-.++.|+++.++|- |
T Consensus 196 ~~~d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~Qr-f 273 (450)
T COG0403 196 DADDLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQR-F 273 (450)
T ss_pred CCCHHHHHHHC-CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCCCCEEEECCCC-C
T ss_conf 64225566532-467737999976888773414099999998635977999826367645578410378669733760-4
Q ss_pred CCCC-----CCEEEEECHHHHHHHHHCC-----CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHH
Q ss_conf 1766-----5154456778887654114-----45778312320011232103347864466644889999999--9862
Q gi|254780153|r 196 GGEA-----GFGIIILSPASVERLEKYV-----PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDA--LLWL 263 (391)
Q Consensus 196 ~~pp-----Gl~~v~~s~~al~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~--l~~i 263 (391)
|.|- ..++..++++...++-..- ..... +-+.+........=++..-|-|-=.-..+.++..+ +-|.
T Consensus 274 GvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~-~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~h 352 (450)
T COG0403 274 GVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGK-RAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYH 352 (450)
T ss_pred CCCCCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77767887563222375867425998433046458998-03201287788887640010155489999999999999986
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
Q ss_conf 0103189999999977999999987479-716766882003653178982473101137345678889999988862828
Q gi|254780153|r 264 KKMGGLSACVERCNANAAVLFQFIQEND-WIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIA 342 (391)
Q Consensus 264 ~~~gGl~~~~~r~~~~a~~l~~~i~~~~-~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 342 (391)
=. .|+..+..|..+++..+.+++++.. ++..+ .+ ..--.++++++. . .. .. +.+++++
T Consensus 353 Gp-~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~-~~---~fFdt~~v~~~~-~-------~~----~~----l~~~~~~ 411 (450)
T COG0403 353 GP-QGLKEIAERIHRLAAYLAAGLKEIGAGVELV-FD---HFFDTFTVRVPE-E-------VA----EA----LLAAAIA 411 (450)
T ss_pred CH-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CC---CCEEEEEEECCH-H-------HH----HH----HHHHHHH
T ss_conf 96-8899999999999999999876458864751-42---422048886463-6-------79----99----9999985
Q ss_pred ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 726655676750568615888999999999999999
Q gi|254780153|r 343 YDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 343 ~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
-+++-.+.-....=|+.=-..+.+||++|++++...
T Consensus 412 ~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 412 GGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred CCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 497414544881599951256789999999997533
No 304
>PRK05839 hypothetical protein; Provisional
Probab=98.00 E-value=0.0014 Score=42.07 Aligned_cols=307 Identities=10% Similarity=0.002 Sum_probs=145.9
Q ss_pred CCCCCCC-CCCCHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCC-
Q ss_conf 8868887-7689689999863210365328--988999999999999999688998-5799974873489998753205-
Q gi|254780153|r 14 PFFSSGP-CAKRPGWSLGILEGALLGRSHR--CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLL- 88 (391)
Q Consensus 14 ~~F~pGP-~~~~p~~v~~~~~~~~l~~sHR--s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~- 88 (391)
.+|+-|= .--.|..+++++....-+.+|= +.=..++-+.+.+-+++-++..=+ -+|++ +.|++.++-.++.-++
T Consensus 27 i~L~iG~pdf~~P~~i~~A~~~~~~~~~~Y~~~~G~peLR~Aia~~~~~~~g~~v~~~~I~v-t~Ga~~al~~~~~~~l~ 105 (376)
T PRK05839 27 LDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEEELREAQRGFFKRRFNIELKENELIP-TFGTREVLFNFPQFVLF 105 (376)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE-CCCHHHHHHHHHHHHHC
T ss_conf 87968899999899999999986444897799878299999999999998689998024998-17889999999999845
Q ss_pred -CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHH--HCCCCCCEEEEEEECCCCEEECCEE-----EE
Q ss_conf -78970799707368888876532387630674--05777657867--6785565799742024202203203-----50
Q gi|254780153|r 89 -GYRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFS--KVDFDRDVVFVWNGTTSGVCVPDVG-----FI 158 (391)
Q Consensus 89 -~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~--~~~~~~~v~~~h~ETstGv~~~~~~-----~~ 158 (391)
.+++.+++-+=.|-.. ..+.+..+..+..+ ..+.+..++++ ..+..+.+.++.=..-||...+..+ .+
T Consensus 106 ~~~~~~i~~p~P~y~~y--~~~~~~~g~~~v~v~l~~e~~~~~~l~~~~~~~tk~iilnsP~NPTG~v~s~eel~~i~~l 183 (376)
T PRK05839 106 DKQNPTIAYPNPFYQIY--EGAAIASRAKSLYMNLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKL 183 (376)
T ss_pred CCCCCEEEECCCCCHHH--HHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 79998899789876325--8999861686324246402588864118765058999988998998823639999999875
Q ss_pred CCCCCCEEEEEECCH-H-HHCCC----C------CCCC-E-EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCC
Q ss_conf 256861488640110-1-10254----5------5685-7-9997001200176651--544567788876541144577
Q gi|254780153|r 159 PESREGLVICDATSA-V-FARHI----D------FNKL-D-VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWP 222 (391)
Q Consensus 159 ~~~~~~llivD~vSs-~-g~~p~----d------~~~i-D-v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~ 222 (391)
|.+++..+|.|-+=+ + ...+. + .... . +++.|.-|.++ -||+ |.++..++.+++......
T Consensus 184 a~~~~~~iisDEiY~~l~~~~~~~s~~~~~~~~~~~~~~~vi~i~s~SK~~~-~~G~RiG~i~~~~~~i~~~~~~~~--- 259 (376)
T PRK05839 184 ALKYDFILINDECYSEIYENTPPPSLLEASILAGNESFKNVLVINSISKRSS-APGLRSGFIAGDSSILKKYKAYRT--- 259 (376)
T ss_pred HCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHHCC-CCCCCEEEEECCHHHHHHHHHHHH---
T ss_conf 1473699998068288637999876888656514553253799923203201-465406999789999999998656---
Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200
Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391)
.+-.+.|+..-.+...++. .+.-++.+.++++++.+.+.+.+. ... |+
T Consensus 260 --------------------~~~~~~~~~~q~aa~~a~~---~~~~~~~~r~~~~~~~~~~~~~l~------~~~--P~- 307 (376)
T PRK05839 260 --------------------YLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREILG------ITI--PP- 307 (376)
T ss_pred --------------------HCCCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHCC------CCC--CC-
T ss_conf --------------------4367851999999999972---966899999999999999987539------888--98-
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC--CC-CCCCE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 36531789824731011373456788899999-8886282872665--56-76750-5686158889999999999999
Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS--YR-DAPLG-LRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~--~r-~~~~~-~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+..-+-+.++ ... ++.. ++.++|+++--|. +. ..|++ +|++.. .+.+.++.-++-|+
T Consensus 308 -g~fy~~~~~~----------d~~----~f~~~Ll~~~gV~v~PG~~FG~~~~g~~~vRls~~--~~~e~L~eal~Rl~ 369 (376)
T PRK05839 308 -YTFYVWLPVQ----------NDE----NFTKKLYQNEGIKVLPGSYLGRNGIGKDYVRLALV--YDTPKLKKALERIK 369 (376)
T ss_pred -EEEEEEEECC----------CHH----HHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEE--CCHHHHHHHHHHHH
T ss_conf -0379986689----------989----99999998099999774001799998996999970--88999999999999
No 305
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=97.94 E-value=0.00076 Score=43.83 Aligned_cols=260 Identities=14% Similarity=0.098 Sum_probs=151.0
Q ss_pred EEECCCCHHHHHHHHHHCCC--CCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHC----C--CCCCE
Q ss_conf 99748734899987532057--8970799707368888876532387630674--0577765786767----8--55657
Q gi|254780153|r 70 AIVPASDTGAVEMALWSLLG--YRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKV----D--FDRDV 139 (391)
Q Consensus 70 ~~l~GsgT~~~ea~~~nl~~--~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~----~--~~~~v 139 (391)
-+-+=|||||.-.+.-.+-. +...+.+.+=.|.+-. ......|. .+..+ ....+...+++.. . ...++
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~-~If~~aGl-~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~v 174 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHK-AIFEAAGL-EVETYPYYDAETKGLDFDGMLADLKTAPEGSV 174 (396)
T ss_pred HEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHH-HHHHHCCC-CEEEEECCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf 30067761289999999998488862884799827589-99996698-14531035466664257999999973789988
Q ss_pred EEEE--EECCCCEEECCEEE-----ECCCCCCEEEEEEC-CHHHH-CCCCCCC--------CEE-EEECCHHCCCC----
Q ss_conf 9974--20242022032035-----02568614886401-10110-2545568--------579-99700120017----
Q gi|254780153|r 140 VFVW--NGTTSGVCVPDVGF-----IPESREGLVICDAT-SAVFA-RHIDFNK--------LDV-VTFSAQKVLGG---- 197 (391)
Q Consensus 140 ~~~h--~ETstGv~~~~~~~-----~~~~~~~llivD~v-Ss~g~-~p~d~~~--------iDv-~~a~sQK~l~~---- 197 (391)
.+.| |-.-||+.....++ +-.+++.+-++|.. ..|+. .+-|.++ .-+ +..|.-|||+.
T Consensus 175 vLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgER 254 (396)
T COG1448 175 VLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGER 254 (396)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHC
T ss_conf 99836778988999999999999999997698236632444421246778999999997298589971000124434300
Q ss_pred CCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHCCCCHH
Q ss_conf 665154456778887654114457783123200112321033478644666448899999999-------8620103189
Q gi|254780153|r 198 EAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-------LWLKKMGGLS 270 (391)
Q Consensus 198 ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-------~~i~~~gGl~ 270 (391)
..++++|.=+.....+... ..+.. -..++..||.++.......| +|.. | ++
T Consensus 255 VGa~~vva~~~~~a~~v~s------------qlk~~-------iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~-E--l~ 312 (396)
T COG1448 255 VGALSVVAEDAEEADRVLS------------QLKAI-------IRTNYSNPPAHGAAVVATILNNPELRAEWEQ-E--LE 312 (396)
T ss_pred CCEEEEEECCHHHHHHHHH------------HHHHH-------HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH-H--HH
T ss_conf 2315888278899999999------------99999-------9863589841239999999489999999999-9--99
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf 99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD 350 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~ 350 (391)
.|..|..++++.+.+.+.+.+--..|..-...++. |.+.. ...+-+.+|.+|-++|-++.
T Consensus 313 ~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GM----Fsy~G-------------ls~~QV~rLree~~IY~v~s--- 372 (396)
T COG1448 313 EMRQRILEMRQALVDALKALGAPRNFDFIISQRGM----FSYTG-------------LSPEQVDRLREEFGIYLVAS--- 372 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCE----EECCC-------------CCHHHHHHHHHHCCEEEECC---
T ss_conf 99999999999999999862788662247546752----44589-------------99999999998566799537---
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 6750568615888999999999999999
Q gi|254780153|r 351 APLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 351 ~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
=||++=| ++..+|+.|.++|..+
T Consensus 373 ----GRi~vaG-l~~~ni~~va~ai~~v 395 (396)
T COG1448 373 ----GRINVAG-LNTSNIDYVAKAIAAV 395 (396)
T ss_pred ----CEEEECC-CCHHHHHHHHHHHHHH
T ss_conf ----8146536-8744089999999864
No 306
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=97.84 E-value=0.0027 Score=40.33 Aligned_cols=308 Identities=18% Similarity=0.177 Sum_probs=162.2
Q ss_pred CHHHHHHHHHH----HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 96899998632----10365328988999999999999999688998579997487348999875320578970799707
Q gi|254780153|r 24 RPGWSLGILEG----ALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~----~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391)
+|. |++++.+ ...|++-++.++.+.+.+=.+. |.-+.+..++ ++|.+ |---++..++..|.++||.+++.+=
T Consensus 40 pp~-i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~-r~~~~i~~e~-i~~~p-~VVpgi~~~I~~~T~~gd~Vvi~tP 115 (388)
T COG1168 40 PPE-IIEALRERVDHGVFGYPYGSDELYAAIAHWFKQ-RHQWEIKPEW-IVFVP-GVVPGISLAIRALTKPGDGVVIQTP 115 (388)
T ss_pred CHH-HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCCCCE-EEECC-CCHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 879-999999998658778878877899999999997-1377788552-89837-5127699999983769982696488
Q ss_pred CHHHHHHHHHHHCCCC--CEEEEECCCCCCCCHHHCCCC------CCEEEEEEECCCCEEECCEE-----EECCCCCCEE
Q ss_conf 3688888765323876--306740577765786767855------65799742024202203203-----5025686148
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQ--DVREFTAPYGSLPDFSKVDFD------RDVVFVWNGTTSGVCVPDVG-----FIPESREGLV 166 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~------~~v~~~h~ETstGv~~~~~~-----~~~~~~~~ll 166 (391)
.+. -++..+..-+.. ..-..+...+...|+++++.. +...+|+=-.-||-.-...+ .+|..+++++
T Consensus 116 vY~-PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~V 194 (388)
T COG1168 116 VYP-PFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRV 194 (388)
T ss_pred CCH-HHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 861-8999875169679746643469847752999999984377608999379999986436999999999999839989
Q ss_pred EEEECCH---HHH-CCCCC-------CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 8640110---110-25455-------68579997001200176651--54456778887654114457783123200112
Q gi|254780153|r 167 ICDATSA---VFA-RHIDF-------NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 167 ivD~vSs---~g~-~p~d~-------~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
|.|=+-+ +.+ ..+.+ .+..+..+|+-|.|.. +|+ +.++++.+.+... +....
T Consensus 195 ISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNl-aGL~~a~~Ii~n~~lr~~--------------~~~~l 259 (388)
T COG1168 195 ISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNL-AGLKCAYIIISNRELRAK--------------FLKRL 259 (388)
T ss_pred EEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCC-HHHHHEEEEECCHHHHHH--------------HHHHH
T ss_conf 830335661216987665432695543235998405221560-444421478348899999--------------99999
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCEEEE
Q ss_conf 32103347864466644889999999986201031--89999999977999999987479-7167668820036531789
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG--LSACVERCNANAAVLFQFIQEND-WIENLAVDETTRSNTSICM 310 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG--l~~~~~r~~~~a~~l~~~i~~~~-~~~~~~~~~~~rS~~~v~~ 310 (391)
+ ....+-|+++++.|...+.+ +|+ |+....--+.+.+.+.+.+.+.. +.....++- |.+
T Consensus 260 ~-------~~~~~~~n~lg~~A~~aAY~----~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~g-------TYL 321 (388)
T COG1168 260 K-------RNGLHGPSALGIIATEAAYN----QGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQG-------TYL 321 (388)
T ss_pred H-------HHCCCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC-------CEE
T ss_conf 8-------73379984688999999997----26499999999999989999999986598747866887-------566
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEE--CCCCCCHHHHHHHHHHHH
Q ss_conf 824731011373456788899999-8886282872665-5676750-5686--158889999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVW--VGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg--~~g~i~~~dv~~L~~aLe 376 (391)
.--|=.-..++.+ .+.. .+.+.++++..|. +...|.| +|+- |--.+-.+-+++|..+|+
T Consensus 322 ~WLD~r~l~l~d~-------~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~ 385 (388)
T COG1168 322 AWLDCRELGLDDS-------ELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALK 385 (388)
T ss_pred EEEECCCCCCCHH-------HHHHHHHHHHCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 6532002389857-------899999975157135787567678745888637988999999999999985
No 307
>PRK13578 ornithine decarboxylase; Provisional
Probab=97.78 E-value=0.0035 Score=39.66 Aligned_cols=302 Identities=11% Similarity=0.012 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHCCCCCEEEEE---CCC
Q ss_conf 999999999999688998579997487348999875320578970799-7073688888765323876306740---577
Q gi|254780153|r 49 RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL-AWESFGLGWMSDIRQLSLQDVREFT---APY 124 (391)
Q Consensus 49 i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~-~~g~~~~r~~~~~~~~~~~~~~~~~---~~~ 124 (391)
...++++...++|+... .+|+..|-|++.-++++.++.+||.+++ -|..-|---. +.-..++....+. .++
T Consensus 175 ~~~eAq~~AA~~FGAD~---TyFvvNGTS~~nk~v~~a~~~pGD~VLvdRN~HKSv~~G--ALIlsGA~PVYl~p~rN~~ 249 (720)
T PRK13578 175 AAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG--ALIQAGATPVYLETARNPF 249 (720)
T ss_pred CHHHHHHHHHHHHCCCE---EEEEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH--HHHHCCCEEEEECCCCCCC
T ss_conf 44799999999849982---699957710889999997458999999656435777778--8986697679966646756
Q ss_pred CCC--CCH-----H----HC--------CC--CCCEEEEEEECCCCEEECCEEEE---CCCCCCEEEEEECCHHHH---C
Q ss_conf 765--786-----7----67--------85--56579974202420220320350---256861488640110110---2
Q gi|254780153|r 125 GSL--PDF-----S----KV--------DF--DRDVVFVWNGTTSGVCVPDVGFI---PESREGLVICDATSAVFA---R 177 (391)
Q Consensus 125 g~~--~~~-----~----~~--------~~--~~~v~~~h~ETstGv~~~~~~~~---~~~~~~llivD~vSs~g~---~ 177 (391)
|.+ .+. + .+ +. ...++++.+.|=.|+..+...++ .+..+ .+++|.-= ++- .
T Consensus 250 GiiggI~~~~f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~TYdGi~yn~~~I~~~i~~~~~-~ilfDEAw-~~~~~F~ 327 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAIIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAW-VGYEQFI 327 (720)
T ss_pred CEECCCCHHHCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHCC-EEEEECCH-HHHHHCC
T ss_conf 511674857527577898887436333123488618999468753542349999999864078-38985110-2144328
Q ss_pred CC-----------CCCCCE-EEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCC
Q ss_conf 54-----------556857-999700120017665154456778887654114457783123200112321033478644
Q gi|254780153|r 178 HI-----------DFNKLD-VVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETI 245 (391)
Q Consensus 178 p~-----------d~~~iD-v~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (391)
|+ ..+.-+ ++.-|.+|=|++-+.-|.+-++..-+ +.. .++.+-.....+... .+
T Consensus 328 P~~~d~~p~~l~~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI------~g~---~r~v~~~rfn~a~mm---h~-- 393 (720)
T PRK13578 328 PMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHI------KGQ---ARYCPHKRFNNAFML---HA-- 393 (720)
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCC------CCC---CCCCCHHHHHHHHHH---HC--
T ss_conf 5311246433345877765046630655544322221012245434------666---566788999999987---70--
Q ss_pred CCCCHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCC------------------------
Q ss_conf 666448899-99999986201031899999999779999999874-7971676688------------------------
Q gi|254780153|r 246 NTPSLLCIE-DYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE-NDWIENLAVD------------------------ 299 (391)
Q Consensus 246 ~TP~v~~i~-al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~-~~~~~~~~~~------------------------ 299 (391)
-|-|-..+. .|..+.++.+.+.|- .++.++-+.+...|..+.+ ...+.+++++
T Consensus 394 STSPsY~L~ASLDv~A~m~~g~~G~-~L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w~~ 472 (720)
T PRK13578 394 STSPFYPLFAALDVNAKMHEGESGR-RLWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSF 472 (720)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCC
T ss_conf 7880899999879999997312145-899999999999999998654442255752126860354888886125010246
Q ss_pred ---C------------CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf ---2------------0036531789824731011373456788899999888628287266556767505686158889
Q gi|254780153|r 300 ---E------------TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVE 364 (391)
Q Consensus 300 ---~------------~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~ 364 (391)
. -.--++=+++.++.=..........+.-...+.++|.+.|+.+......+.- |=++.+ .+
T Consensus 473 ~Pg~~WHGf~g~~~~~~~lDP~Klti~tPGi~~~~g~~~~~GIpA~il~~yLre~gIvvEktdl~~IL--fL~T~G--~t 548 (720)
T PRK13578 473 EPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGVPATILANYLRENGIVPEKCDLNSIL--FLLTPA--ED 548 (720)
T ss_pred CCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEE--EEECCC--CC
T ss_conf 88742246555576634226737998536745566542136875899999998769079854775079--997267--88
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 365 KEDLLLLCDWLR 376 (391)
Q Consensus 365 ~~dv~~L~~aLe 376 (391)
.+++++|+.+|-
T Consensus 549 ~~k~~~Lv~aL~ 560 (720)
T PRK13578 549 MAKLQQLVAMLA 560 (720)
T ss_pred HHHHHHHHHHHH
T ss_conf 899999999999
No 308
>TIGR01814 kynureninase kynureninase; InterPro: IPR010111 This entry describes kynureninase, it is a pyridoxal-5'-phosphate (PLP)-dependent enzyme that catalyzes the hydrolytic cleavage of L-kynurenine to anthranilic acid and L-alanine. Kynurinine is a Trp breakdown product and a precursor for NAD. This reaction is a key step in the catabolism of L-tryptophan by Pseudomonas fluorescens and some other bacteria (1). In fungi and vertebrates, kynurenine is first hydroxylated to 3-hydroxykynurenine, which is the preferred substrate of kynureninase in those organisms, resulting in 3-hydroxyanthranilate and L-alanine. Sequence alignment with other PLP-dependent enzymes indicated that kynureninase is in subgroup IVa of the aminotransferases, along with nifS, CsdB, and serine-pyruvate aminotransferase, which suggests that kynureninase has an aminotransferase fold .; GO: 0030170 pyridoxal phosphate binding, 0030429 kynureninase activity, 0006569 tryptophan catabolic process, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=97.63 E-value=0.0031 Score=39.94 Aligned_cols=316 Identities=15% Similarity=0.115 Sum_probs=190.8
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC-----CCE--EEEEECCHHHHH--HHHHHHCC
Q ss_conf 988999999999999999688998579997487348999875320578-----970--799707368888--87653238
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGY-----RGV--DVLAWESFGLGW--MSDIRQLS 113 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~-----~~~--~~~~~g~~~~r~--~~~~~~~~ 113 (391)
..+...+-+.+...+++++....+ +|++++ |=|--.-..+.++.++ .+. .+.-.+.|=... ++-..++.
T Consensus 81 ~~pW~~~~~~~~~l~~~vlvA~~~-evv~~n-slT~NLh~ll~~Fy~pqredt~~R~kIL~E~~aFPSD~Ya~e~Q~~L~ 158 (444)
T TIGR01814 81 KVPWFTLDEALLKLLADVLVAQEK-EVVVMN-SLTVNLHKLLASFYKPQREDTEKRTKILLEAKAFPSDLYAIESQLRLH 158 (444)
T ss_pred CCCCCCCCHHHHCCCCHHEECCCC-CEEEEC-HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 788620345353143100111665-366300-433889999998707542477334575651678872799999997467
Q ss_pred CCCEE----EEECCCCCC-CCHH----HCCCC-CCEEE---EEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCC
Q ss_conf 76306----740577765-7867----67855-65799---7420242022032035--025686148864011011025
Q gi|254780153|r 114 LQDVR----EFTAPYGSL-PDFS----KVDFD-RDVVF---VWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARH 178 (391)
Q Consensus 114 ~~~~~----~~~~~~g~~-~~~~----~~~~~-~~v~~---~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p 178 (391)
+.++. .++...|+. .... .++.. +.+++ .|..==||=..+..++ .++.+++++|.|=.=+++..|
T Consensus 159 g~~~e~~l~~~~p~~~e~tLr~~di~~~iE~~~D~~A~v~l~~V~Y~TGQ~fDm~~~t~~a~~~~~~~vfDLAHa~~NvP 238 (444)
T TIGR01814 159 GLEPEEHLVQVEPREAEETLRLEDILDTIEKNGDEIALVLLSGVQYYTGQLFDMRAITRAAHKRGAIVVFDLAHAVANVP 238 (444)
T ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCC
T ss_conf 98734412677422344211078899999853897899984784430236789999999970897659960222110763
Q ss_pred CC--CCCCEEEEECCHHCCCCCCCC---EEEEECHHHHHHHHHCCCCCCC--CCHHHCCHHHHHHCCCCCCCCCCCCCHH
Q ss_conf 45--568579997001200176651---5445677888765411445778--3123200112321033478644666448
Q gi|254780153|r 179 ID--FNKLDVVTFSAQKVLGGEAGF---GIIILSPASVERLEKYVPSWPL--PKIFRMVKGGRVMEGLFCGETINTPSLL 251 (391)
Q Consensus 179 ~d--~~~iDv~~a~sQK~l~~ppGl---~~v~~s~~al~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~TP~v~ 251 (391)
++ .|++|..+=++=|=|-.+||. .||--++.--++. .....|+- +.-|.+...... .....+-..-||||+
T Consensus 239 l~LH~w~VDFA~WC~YKYLNa~pg~v~~~F~h~~~~~~~~~-~~~lwWwh~~~~rF~m~~~~~~-~~g~~~~~~snPpv~ 316 (444)
T TIGR01814 239 LDLHDWGVDFACWCSYKYLNASPGIVVGAFVHEKHAHEELP-RLALWWWHARPKRFKMENTLVL-RPGAAAFRLSNPPVL 316 (444)
T ss_pred CCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHCCCCH-HCCCCCCCCCCHHHCCCHHCCC-CCCCHHHHHCCCCHH
T ss_conf 22578888777884660116113555123102244114200-0255324576343244110255-642024330587688
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-------------C-CCCCCCCC-CCCEEEEEECCCC
Q ss_conf 8999999998620103189999999977999999987479716-------------7-66882003-6531789824731
Q gi|254780153|r 252 CIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIE-------------N-LAVDETTR-SNTSICMKIVDSD 316 (391)
Q Consensus 252 ~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~-------------~-~~~~~~~r-S~~~v~~~~~d~~ 316 (391)
.+.+|..+|+.+. +-++++..+|+-.+...+-+-++..-... . .+.+...| |...+ .++.
T Consensus 317 ~~a~L~sSL~~F~-q~~m~~lRkKS~~LTdyl~~L~~~~~~~~~~~rie~~k~~~~I~TP~~~~~Rgcqls~--~~~~-- 391 (444)
T TIGR01814 317 SVAALRSSLDLFD-QASMEALRKKSLLLTDYLEELIKARCAYKKALRIETLKLVLTIITPEDHAQRGCQLSL--EFPS-- 391 (444)
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCCCEEEE--EECC--
T ss_conf 8988885477663-0584899999988877899999852258512320357856897378881215543789--7078--
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 011373456788899999888628287266556767505686-158889999999999999999
Q gi|254780153|r 317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~ 379 (391)
+..-...+...|.+.|+++|- | .|.+||+. +-=+++=.||-.+++.|+.+.
T Consensus 392 --------~~~~~~~~~~~L~~r~vv~D~---R-~P~vIR~APvpLYn~F~DVy~~V~~L~~~~ 443 (444)
T TIGR01814 392 --------DRKEDAAVFQALIKRGVVIDF---R-EPSVIRLAPVPLYNTFVDVYDAVEVLEEIL 443 (444)
T ss_pred --------CCCHHHHHHHHHHHCCCEEEC---C-CCCCEEEECCCCCCCEEHHHHHHHHHHHHH
T ss_conf --------887035789999867963302---5-888327627645365504989999999994
No 309
>PRK04311 selenocysteine synthase; Provisional
Probab=97.52 E-value=0.008 Score=37.34 Aligned_cols=158 Identities=22% Similarity=0.273 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-------ECCHHHHHHHHHHHCCCCCEEEE-EC
Q ss_conf 99999999996889985799974873489998753205789707997-------07368888876532387630674-05
Q gi|254780153|r 51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-------WESFGLGWMSDIRQLSLQDVREF-TA 122 (391)
Q Consensus 51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-------~g~~~~r~~~~~~~~~~~~~~~~-~~ 122 (391)
..+.+.|+++.+..+ ++++.-.+ .|.--++ |-+..|..+++. .|+| |. -++-+..++....+ ..
T Consensus 132 ~~v~~ll~~ltgaE~---a~vVNNNA-aAv~L~l-~~la~gkEviVSRGelvEIGGsF--Ri-Pdim~~sGa~L~EVGtT 203 (465)
T PRK04311 132 RALAALLCELTGAED---ALVVNNNA-AAVLLAL-NALAAGKEVIVSRGELVEIGGAF--RI-PDVMRQAGAKLVEVGTT 203 (465)
T ss_pred HHHHHHHHHHHCCCE---EEEECCCH-HHHHHHH-HHHHCCCEEEEECCCEEEECCCC--CC-HHHHHHCCCEEEECCCC
T ss_conf 999999998549873---79982848-9999999-98627985999645356526765--62-78998659888743767
Q ss_pred CCCCCCCHHH-CCCCCC-EEEEEEE--CCCCEE----ECCEEEECCCCCCEEEEEECCHHH---------HCCC--C--C
Q ss_conf 7776578676-785565-7997420--242022----032035025686148864011011---------0254--5--5
Q gi|254780153|r 123 PYGSLPDFSK-VDFDRD-VVFVWNG--TTSGVC----VPDVGFIPESREGLVICDATSAVF---------ARHI--D--F 181 (391)
Q Consensus 123 ~~g~~~~~~~-~~~~~~-v~~~h~E--TstGv~----~~~~~~~~~~~~~llivD~vSs~g---------~~p~--d--~ 181 (391)
.-+...|-+. +...+. +..||.. -..|-. ......+++.++.+++.|-=|... .+|. + .
T Consensus 204 NrT~l~DY~~AI~~~Ta~llkvH~SN~~i~GFt~~v~~~eL~~l~~~~~ip~~~DlGSG~l~~~~~~gl~~Ep~v~~~l~ 283 (465)
T PRK04311 204 NRTHLRDYEDAINENTALLLKVHTSNYRIVGFTKEVSEAELAALGKEHGLPVVVDLGSGSLVDLSQYGLPDEPTVQELLA 283 (465)
T ss_pred CCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 88887999986495654899995687654674688999999999987599279988875213653126999998899997
Q ss_pred CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC
Q ss_conf 685799970012001766515445677888765411
Q gi|254780153|r 182 NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY 217 (391)
Q Consensus 182 ~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~ 217 (391)
.+.|++.+|.-|-|||| .-|+++-++++++++.+.
T Consensus 284 ~GaDLVtFSGDKLLGGP-QAGIIvGkk~lI~~lkkn 318 (465)
T PRK04311 284 AGVDLVTFSGDKLLGGP-QAGIIVGKKELIERLKKH 318 (465)
T ss_pred CCCCEEEEECCCCCCCC-CCCEEECHHHHHHHHHHC
T ss_conf 29988998554014798-543374009999999868
No 310
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=97.45 E-value=0.0099 Score=36.77 Aligned_cols=281 Identities=13% Similarity=0.124 Sum_probs=162.5
Q ss_pred HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC-CCCC--CCCHH
Q ss_conf 999996889985799974873489998753205-7897079970736888887653238763067405-7776--57867
Q gi|254780153|r 56 LTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA-PYGS--LPDFS 131 (391)
Q Consensus 56 ~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~-~~g~--~~~~~ 131 (391)
++..-+.. || +++++|++.|+|.++..|. .+|+=+++===+|... .-.++..+.+++.++- -..+ -.|++
T Consensus 102 ~~~~~l~a-~D---V~ltsGCsqAIe~~I~aLA~~pG~NILvPRPGfP~Y--~t~A~~~~lEvr~ydLdlPe~~WeiDL~ 175 (424)
T TIGR01265 102 RLPGKLSA-DD---VVLTSGCSQAIEIVIEALAQNPGANILVPRPGFPLY--DTRAAFSGLEVRLYDLDLPEKDWEIDLD 175 (424)
T ss_pred CCCCCCCC-CC---EEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCH--HHHHHHCCCCCCCCCCCCCCCCCEECHH
T ss_conf 88887576-64---488477226899999997268988355687778668--9999771872000246788875236478
Q ss_pred HCCC---CCCEEE-EEE-ECCCCEEEC---CEEE--ECCCCCCEEEEEECCH---HHH----CCC-CCCCCE-----EEE
Q ss_conf 6785---565799-742-024202203---2035--0256861488640110---110----254-556857-----999
Q gi|254780153|r 132 KVDF---DRDVVF-VWN-GTTSGVCVP---DVGF--IPESREGLVICDATSA---VFA----RHI-DFNKLD-----VVT 188 (391)
Q Consensus 132 ~~~~---~~~v~~-~h~-ETstGv~~~---~~~~--~~~~~~~llivD~vSs---~g~----~p~-d~~~iD-----v~~ 188 (391)
.++. .+-+++ +-| ..-+|-.+. +.++ .+++.+.++|.|=|=. |++ -|| .+..++ +..
T Consensus 176 ~le~l~DekT~A~vv~NP~NPCGsVF~~~HL~k~~~~A~kl~i~iIADEiY~~~Vf~dkDPn~~F~p~a~f~~~VPvl~l 255 (424)
T TIGR01265 176 GLESLADEKTVAIVVINPSNPCGSVFSRDHLEKIAEVARKLGIPIIADEIYGHLVFGDKDPNAPFVPMASFASIVPVLSL 255 (424)
T ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99876326876999847566788887888899999999870982687763164144889788862230035786886886
Q ss_pred ECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 700120017665--154456778887654114457783123200112321033478644666448899999999862010
Q gi|254780153|r 189 FSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM 266 (391)
Q Consensus 189 a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~ 266 (391)
.|--|.| ..|| ||=+++-++ .......+. .....+. -+..-=|+|+.=-||-..|+.-.++
T Consensus 256 GgisKrW-~VPGWRlGWi~~~Dp----~gi~~~~k~------~~gl~~~------~~~~~gP~Ti~QgALP~IL~~Tp~e 318 (424)
T TIGR01265 256 GGISKRW-VVPGWRLGWIIVHDP----HGILRDTKV------LQGLKNV------LQLILGPATIVQGALPDILENTPQE 318 (424)
T ss_pred CCHHCCC-CCCCCEEEEEEEECC----CCCCCCCCH------HHHHHHH------HCCCCCCHHHHHHHHHHHHHHCCHH
T ss_conf 3101123-277622432778888----775444403------3898998------4234781578999999998516876
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE-----
Q ss_conf 318999999997799999998747971676688200365317898247310113734567888999998886282-----
Q gi|254780153|r 267 GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEI----- 341 (391)
Q Consensus 267 gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~----- 341 (391)
- ++.....-+++++..|+.|....++.+. .+|+...- +-+++.-..+.++ ..+-.|..++ ..+|++
T Consensus 319 f-F~~~~~~lk~na~l~y~~L~~ipg~~c~-~KP~G~MY--~mvkl~~~~~~~i--kdD~dFc~kL---~~EESv~~LPG 389 (424)
T TIGR01265 319 F-FDKKISVLKENAELCYEELKDIPGLTCP-KKPEGSMY--LMVKLELELLEEI--KDDVDFCEKL---VKEESVICLPG 389 (424)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCEE--EHHHCCHHHCCCC--CCCHHHHHHH---HHHCCCEECCC
T ss_conf 8-8999999885188999997348876476-48887500--0201016534464--6418999999---87376335460
Q ss_pred -EECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf -87266556767505686158889999999999999
Q gi|254780153|r 342 -AYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 342 -~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
++++.+| +||...- +.+.++--++-|+
T Consensus 390 ~~f~~pnw------~Rit~t~--~~~~~~Ea~~Rik 417 (424)
T TIGR01265 390 SAFGLPNW------VRITITV--PKSMLEEALERIK 417 (424)
T ss_pred EEECCCCC------EEEEECC--CHHHHHHHHHHHH
T ss_conf 02559984------7998527--6778999999998
No 311
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=97.44 E-value=0.01 Score=36.65 Aligned_cols=313 Identities=15% Similarity=0.094 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEEC-CCCHHHHHHHHH--HCC-C----CCCEEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 89999999999999996889985799974-873489998753--205-7----897079970736888887653238763
Q gi|254780153|r 45 LGKERINKAIQLTRKVLEVPENYRIAIVP-ASDTGAVEMALW--SLL-G----YRGVDVLAWESFGLGWMSDIRQLSLQD 116 (391)
Q Consensus 45 ~f~~i~~~~~~~l~~l~~~p~~y~v~~l~-GsgT~~~ea~~~--nl~-~----~~~~~~~~~g~~~~r~~~~~~~~~~~~ 116 (391)
=..+++.+.++.|.++-+... +-+-+ +|++|-+.+..+ ... . +.+++++-....|-.-+ .+...+..
T Consensus 112 G~Lq~i~elq~~L~eITGmd~---vSlqP~aGAqGE~aGll~Irayh~~~G~~~R~~vLiP~SAHGTNPA--sA~maG~~ 186 (490)
T PRK04366 112 GALELMYELQEWLKEITGMDA---VTLQPAAGAHGELTGLLIIRAYHEARGDTKRTEVIVPDSAHGTNPA--SAAMAGFK 186 (490)
T ss_pred HHHHHHHHHHHHHHHHHCCCE---EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH--HHHHCCCE
T ss_conf 999999999999999859985---8406898559999999999999997598577679985556789878--88755944
Q ss_pred EEEEEC-CCCCCCCHHHCCC----CCCEEEEEEECCCCEEECC-EEE--ECCCCCCEEEEEECCH--HHH--CCCCCCCC
Q ss_conf 067405-7776578676785----5657997420242022032-035--0256861488640110--110--25455685
Q gi|254780153|r 117 VREFTA-PYGSLPDFSKVDF----DRDVVFVWNGTTSGVCVPD-VGF--IPESREGLVICDATSA--VFA--RHIDFNKL 184 (391)
Q Consensus 117 ~~~~~~-~~g~~~~~~~~~~----~~~v~~~h~ETstGv~~~~-~~~--~~~~~~~llivD~vSs--~g~--~p~d~~~i 184 (391)
+..+.. +.| .+|+++++. ..+..++.|=+..|+..+. .++ +.|+.|.++..|+.-- +.+ .|-| -++
T Consensus 187 Vv~v~~~~~G-~vDle~Lka~~~~~~A~lMiTnPnt~GvfE~~i~ei~~ivH~~Ggl~Y~DGANlNAi~G~~rPgd-~G~ 264 (490)
T PRK04366 187 VVEIPSNEDG-LVDLEALKAAVGEDTAALMLTNPNTLGLFERNIKEIAEIVHEAGGLLYYDGANLNAILGKVRPGD-MGF 264 (490)
T ss_pred EEEECCCCCC-CCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHH-CCC
T ss_conf 6882579899-81999999987531031355157653602248999999999719989865756200013147766-587
Q ss_pred EEEEECCHHCCC-----CCCCCEEEEECHHHHHHHHHCC-CCCCCCCHHHCCHHHHHHCCCCC-CCCCCCCCHHHHHHHH
Q ss_conf 799970012001-----7665154456778887654114-45778312320011232103347-8644666448899999
Q gi|254780153|r 185 DVVTFSAQKVLG-----GEAGFGIIILSPASVERLEKYV-PSWPLPKIFRMVKGGRVMEGLFC-GETINTPSLLCIEDYI 257 (391)
Q Consensus 185 Dv~~a~sQK~l~-----~ppGl~~v~~s~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~TP~v~~i~al~ 257 (391)
|++-.--+|-|+ |=||.|+|.+++++..-+-.-. ........+++... ....+ .+++..-. .+-
T Consensus 265 Dv~HlNLHKTFstPHGGGGPG~Gpv~v~~~L~pfLP~P~v~~~~~~y~l~~~~~----~siG~v~~f~Gn~~-----vl~ 335 (490)
T PRK04366 265 DVVHLNLHKTFSTPHGGGGPGSGPVGVKKELAPFLPVPVVEKDGGRYRLDYDRP----KSIGRVRAFYGNFG-----VLV 335 (490)
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCEECCCCCCCCCCCCC----CCCCCCCCCCCCHH-----HHH
T ss_conf 457531342344578888888775325544120088870213688311267887----66321120247518-----899
Q ss_pred HHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999862010--318999999997799999998747971676688200365317898247310113734567888999998
Q gi|254780153|r 258 DALLWLKKM--GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 258 ~~l~~i~~~--gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
.+.-||... .||...-+..--+++.+...+... +.... +.. .+. =|.+....+ .........++.++
T Consensus 336 ra~~Yi~~lG~~GL~~~s~~AvLNANYl~~~L~~~--~~~~y--~~~--~~H-Efv~~~~~~----~k~~gv~~~DiaKr 404 (490)
T PRK04366 336 RAYAYIRSLGAEGLREVSEDAVLNANYLMARLKDV--YDLPY--PRR--CMH-EFVLSGKRL----KKETGVRALDIAKR 404 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCC--CCC--EEE-EEEECCHHH----HHHCCCCHHHHHHH
T ss_conf 99999998667478999999999999999985355--75788--997--678-999643775----44239989999999
Q ss_pred HHHCCEEECCCCCCCC-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8862828726655676-750568615888999999999999999999999
Q gi|254780153|r 336 LEKEEIAYDIGSYRDA-PLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 336 l~~~g~~~~~~~~r~~-~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
|...|..--+-.+... ...+=|----.=+.+++|+++++|.....+.+.
T Consensus 405 LlDyG~H~pT~~fPliV~e~lmiEPTEsEske~LD~f~~am~~I~~ea~~ 454 (490)
T PRK04366 405 LLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIDAMKEIAEEAKE 454 (490)
T ss_pred HHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 85779997610166657873153675777999999999999999999985
No 312
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase; InterPro: IPR006234 These sequences represent O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis..
Probab=97.40 E-value=0.0015 Score=42.06 Aligned_cols=230 Identities=18% Similarity=0.178 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH--HHHHHHCCCCCEEEEEC
Q ss_conf 8999999999999999688998579997487348999875320578970799707368888--87653238763067405
Q gi|254780153|r 45 LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW--MSDIRQLSLQDVREFTA 122 (391)
Q Consensus 45 ~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~--~~~~~~~~~~~~~~~~~ 122 (391)
+=.+.++ ++|+-|=|. +..+-|.||-.++-|+++.|++-||+++..=.-||.-. ..++-.+-|+++...
T Consensus 54 PTv~~FE---~Rla~LEGA----e~A~AtAsGMsAi~A~l~~L~~AGDhvv~sRSlFGst~~~~~~~l~rFGv~v~fv-- 124 (386)
T TIGR01325 54 PTVKVFE---ERLALLEGA----ERAVATASGMSAILAALMALLSAGDHVVASRSLFGSTVVLVSEILPRFGVEVSFV-- 124 (386)
T ss_pred CCHHHHH---HHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHCCEEEEEECCCCCCCEEEEEC--
T ss_conf 6157889---999974060----3788642138999999999861687799851000320021012534354067517--
Q ss_pred CCCCCCCHHHCCCC--CCEEEEEEECCCCEEECCEE--------EECCCCCCEEEEEEC--CHHHHCCCCCCCCEEEEEC
Q ss_conf 77765786767855--65799742024202203203--------502568614886401--1011025455685799970
Q gi|254780153|r 123 PYGSLPDFSKVDFD--RDVVFVWNGTTSGVCVPDVG--------FIPESREGLVICDAT--SAVFARHIDFNKLDVVTFS 190 (391)
Q Consensus 123 ~~g~~~~~~~~~~~--~~v~~~h~ETstGv~~~~~~--------~~~~~~~~llivD~v--Ss~g~~p~d~~~iDv~~a~ 190 (391)
...|+.+|+.+ ..--.+..||-+ ||..+ .++|..|+++|||=+ |=++..|+. -+.||++.|
T Consensus 125 ---~~~Dl~~WeaA~~~nTkl~f~EtPS---NPl~e~~Di~AlaELAHA~GA~lvvDN~f~tP~~qqPL~-lGaDvvv~S 197 (386)
T TIGR01325 125 ---DATDLKAWEAALKPNTKLVFVETPS---NPLAELVDIAALAELAHAVGALLVVDNVFATPVLQQPLK-LGADVVVYS 197 (386)
T ss_pred ---CCCCHHHHHHHCCCCCCEEEEECCC---CHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCC-CCCEEEEEC
T ss_conf ---8678788898569995078863688---704679999999998873341002114564100138864-564079864
Q ss_pred CHHCCCCCC-CCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
Q ss_conf 012001766-5154456778887654114457783123200112321033478644666448899999999862010318
Q gi|254780153|r 191 AQKVLGGEA-GFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGL 269 (391)
Q Consensus 191 sQK~l~~pp-Gl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl 269 (391)
+=|.+=|-. ++|=+++..+.+-+ . + +-++..+ .| -|-+-|.-+.|.+-|+ .|
T Consensus 198 ATK~IDGqGRvlGGv~~G~~e~~~-----~--~---v~~~lr~--------~G---palSpFNAW~lLkGlE------TL 250 (386)
T TIGR01325 198 ATKHIDGQGRVLGGVILGSEELME-----E--F---VAKFLRH--------TG---PALSPFNAWVLLKGLE------TL 250 (386)
T ss_pred CCEEECCCCCEECCEEECCHHHHH-----H--H---HHHHHHC--------CC---CCCCHHHHHHHHHHHH------HH
T ss_conf 620113875401214536077753-----4--8---9999742--------57---4323678999850345------78
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC----CC-CCCCCC--------CCCCEEEEEECCCCC
Q ss_conf 9999999977999999987479716----76-688200--------365317898247310
Q gi|254780153|r 270 SACVERCNANAAVLFQFIQENDWIE----NL-AVDETT--------RSNTSICMKIVDSDI 317 (391)
Q Consensus 270 ~~~~~r~~~~a~~l~~~i~~~~~~~----~~-~~~~~~--------rS~~~v~~~~~d~~~ 317 (391)
+=|.+++...|-.|-+||+..+... ++ +..|.+ =.-+||+|.+.+|+.
T Consensus 251 ~lR~~~~~~sAl~lA~~L~~~p~v~~V~Y~~lP~HPq~~lar~Q~~GGG~Vv~f~l~~~ed 311 (386)
T TIGR01325 251 SLRVQKQADSALALAEWLEEQPKVQAVYYPGLPDHPQHELARRQQSGGGTVVAFDLKGGED 311 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHH
T ss_conf 9999861478999999997089557987587878852689998418996799973268645
No 313
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=97.30 E-value=0.015 Score=35.62 Aligned_cols=279 Identities=15% Similarity=0.127 Sum_probs=141.5
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEE
Q ss_conf 79997487348999875320578970799707368888876532387630674-057776578676785-----565799
Q gi|254780153|r 68 RIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVF 141 (391)
Q Consensus 68 ~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~ 141 (391)
.|++ --|-+.++.+++.-|+.+||.+++-+=.|-- |.....-.++..|... ....+-.+++++++. .+.+.+
T Consensus 210 di~~-gnGvSE~i~~am~Alln~GDeVLiP~P~YPl-yta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT~kTKAIVI 287 (518)
T PRK13355 210 DIYT-GNGVSELINLSMSALLDDGDEVLVPSPDYPL-WTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKITSKTKAIVI 287 (518)
T ss_pred HEEE-CCCHHHHHHHHHHHHCCCCCEEEECCCCCCC-HHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 3565-4776799999999836899989825999977-8999886098788987452217788999998535715579999
Q ss_pred EEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHHHC----CCCC-----CCCEEEEECCHHCCCCCCCCEEE--E
Q ss_conf 742024202203203-----502568614886401101102----5455-----68579997001200176651544--5
Q gi|254780153|r 142 VWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVFAR----HIDF-----NKLDVVTFSAQKVLGGEAGFGII--I 205 (391)
Q Consensus 142 ~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g~~----p~d~-----~~iDv~~a~sQK~l~~ppGl~~v--~ 205 (391)
..=..-||..++... .++.+++.++|.|=+=+-... ...+ +..-+.+-|.-|++. .+|.=+- +
T Consensus 288 nNPNNPTGAVyS~E~LeeIaeiArehdLiIISDEIY~~LvYDg~~h~Siasla~d~~~It~NG~SKsya-MtGWRiGwmv 366 (518)
T PRK13355 288 INPNNPTGALYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM-IAGFRAGWMM 366 (518)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCEE-CCEEEEEEEE
T ss_conf 689898887889999999999999859699962302210068986304767088645999887766633-2201136654
Q ss_pred ECH-HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 677-8887654114457783123200112321033478644666448899999999862010318999999997799999
Q gi|254780153|r 206 LSP-ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLF 284 (391)
Q Consensus 206 ~s~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~ 284 (391)
++. +...+ .+..- .... .++.-.+++..-++...+|.-.....-+-....|..++++.++
T Consensus 367 ~sG~~~~a~-----------~~Ie~---l~~L-----as~~lcsnvpaQ~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~ 427 (518)
T PRK13355 367 LSGNKRHAK-----------DYIEG---LNML-----ANMRMCSNVPAQSVVQTALGGHQSVKDYTVPGGRLYDQRELVY 427 (518)
T ss_pred ECCCHHHHH-----------HHHHH---HHHH-----HHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 248589999-----------99999---9998-----6045663689999999986287648999999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--CCCCCCEEEEECCCC
Q ss_conf 998747971676688200365317898247310113734567888999998886282872665--567675056861588
Q gi|254780153|r 285 QFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--YRDAPLGLRVWVGVT 362 (391)
Q Consensus 285 ~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~r~~~~~~RIg~~g~ 362 (391)
+++...+++....++-.+ -.|--.|+.. .....+..|. ..+|.++++++=-|. .-..+.-|||+.-.
T Consensus 428 e~Ln~IpGvscvkP~GAF-----YlFPkID~~~--~~i~dDeeFa---l~LL~Ee~VlVVPGsaFG~~~pghfRIsyap- 496 (518)
T PRK13355 428 DMLNAIPGISAVKPKAAF-----YIFPKIDVKI--FNIHSDEQFA---LDLLHEKHILISHGGAFNWDKPDHFRVVYLP- 496 (518)
T ss_pred HHHHCCCCCEECCCCEEE-----EEEEECCCCC--CCCCCHHHHH---HHHHHHCCEEEECCCCCCCCCCCEEEEEECC-
T ss_conf 998359997658998158-----9955415344--8998999999---9999858999958754489998979999279-
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 899999999999999999
Q gi|254780153|r 363 VEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 363 i~~~dv~~L~~aLe~~~~ 380 (391)
+.+++...++-|+..+.
T Consensus 497 -s~e~L~EA~~RI~~FL~ 513 (518)
T PRK13355 497 -RLGMLEETMDELDDFFS 513 (518)
T ss_pred -CHHHHHHHHHHHHHHHH
T ss_conf -99999999999999999
No 314
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.03 E-value=0.028 Score=33.92 Aligned_cols=292 Identities=11% Similarity=-0.003 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 99999999996889985799974873489998753205-78--9707997073688888765323876306740577765
Q gi|254780153|r 51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSL 127 (391)
Q Consensus 51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~ 127 (391)
=+-+..+.+|.+.+=..- -++. .||.+-||+.+..- .+ ..+.++...-+-+...-.-.+.....+.++..
T Consensus 127 ~nfQTmi~dLTGm~vaNA-SllD-eaTAaAEAm~ma~r~~k~k~~~~~V~~~~~Pqt~~Vl~tra~~~gie~vv~----- 199 (954)
T PRK12566 127 LNFQQMTIDLTGLDLANA-SLLD-EATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLKTRAEGFGFELVVD----- 199 (954)
T ss_pred HHHHHHHHHHHCCCCCCC-CCHH-HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEC-----
T ss_conf 999999999878760057-6000-899999999998987536888799889878889999996033579579963-----
Q ss_pred CCHHHCCCCC-CEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEE--CCHHHHCCCCCCCCEEEEECCHHCCCCCC---
Q ss_conf 7867678556-57997420242022032035--0256861488640--11011025455685799970012001766---
Q gi|254780153|r 128 PDFSKVDFDR-DVVFVWNGTTSGVCVPDVGF--IPESREGLVICDA--TSAVFARHIDFNKLDVVTFSAQKVLGGEA--- 199 (391)
Q Consensus 128 ~~~~~~~~~~-~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~--vSs~g~~p~d~~~iDv~~a~sQK~l~~pp--- 199 (391)
++++....+ ..++++.=.+.|...+.... .+|..+++++|.+ .|-..-.|--.++.|+++.++|- ||.|.
T Consensus 200 -~~~~~~~~~~~gvlvqyP~~~G~i~d~~~~~~~ah~~gal~iv~~D~laL~lLk~PGe~GADIavG~~Qr-fGvPmgfG 277 (954)
T PRK12566 200 -EVDNLAQHAVFGALLQYPDTHGEVRDLRPLIDQLHGQQALACVAADLLSLLLLTPPGELGADVVLGSTQR-FGVPMGYG 277 (954)
T ss_pred -CHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHHCCCCEEEEECCC-CCCCCCCC
T ss_conf -8676676675899997899887614756789877345928998656768770498344187579840663-67655678
Q ss_pred --CCEEEEECHHHHHHHHHC----C-CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCHHH
Q ss_conf --515445677888765411----4-457783123200112321033478644666448899999999-86201031899
Q gi|254780153|r 200 --GFGIIILSPASVERLEKY----V-PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-LWLKKMGGLSA 271 (391)
Q Consensus 200 --Gl~~v~~s~~al~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-~~i~~~gGl~~ 271 (391)
..+|...+++...++-.+ . ..... .-+.+....+...=++..-|-|-=.-..+.|.-.++ --..--.||.+
T Consensus 278 GPhagffAtr~~~kR~mPGRiVGvS~D~~G~-~a~rlaLQTREQHIRReKATSNICTaQaLLA~mAamYAvYHGPeGLk~ 356 (954)
T PRK12566 278 GPHAAFFACRDDYKRAMPGRIIGVSRDARGN-TALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKR 356 (954)
T ss_pred CCCEEEEEEHHHHHCCCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 8750233572446535997434037779979-513221336899998620100002778999999999998719999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
Q ss_conf 99999977999999987479716766882003653178982473101137345678889999988862828726655676
Q gi|254780153|r 272 CVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA 351 (391)
Q Consensus 272 ~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~ 351 (391)
+.+|...++..+.+.+.+.+ +.. .+..+- -.+++.+.+.. +.+.....+.++-+. ..
T Consensus 357 IA~rih~~a~~la~~L~~~G-~~v--~~~~fF--DTl~v~~~~~~-------------~~i~~~A~~~~iNlR-----~~ 413 (954)
T PRK12566 357 IAQRVHRLTAILAAGLEAKG-IKR--LNRHFF--DTLTLEVGGAQ-------------AAIIESAEAAQINLR-----IL 413 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCC-CEE--CCCCEE--EEEEEECCCCH-------------HHHHHHHHHCCCEEE-----EE
T ss_conf 99999999999999998779-712--578615--67999648649-------------999999997797478-----71
Q ss_pred C-CEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 7-50568615888999999999999
Q gi|254780153|r 352 P-LGLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 352 ~-~~~RIg~~g~i~~~dv~~L~~aL 375 (391)
. ..+.|++--..+.+|+..|++..
T Consensus 414 d~~~vgISlDEttt~~dl~~Ll~vF 438 (954)
T PRK12566 414 GRGRLGLSLDETCDEATVARLFDIF 438 (954)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 6997999805668899999999998
No 315
>PRK05367 glycine dehydrogenase; Provisional
Probab=96.88 E-value=0.037 Score=33.09 Aligned_cols=293 Identities=12% Similarity=0.015 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCC-CEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 99999999996889985799974873489998753205--789-707997073688888765323876306740577765
Q gi|254780153|r 51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYR-GVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSL 127 (391)
Q Consensus 51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~ 127 (391)
=+-+..+-+|.+.+=.. .-++. +||.+-||+.+-.- +++ .+.++...-+-+...-.-.+.....+.+...+
T Consensus 128 ~nfQtmi~dLTGm~vaN-ASllD-eaTAaaEAm~ma~r~~k~k~~~~~V~~~~~Pqt~~Vl~Tra~~~giei~v~d---- 201 (955)
T PRK05367 128 LNFQTMVCDLTGLPIAN-ASLLD-EATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVVRTRAEPLGIEVVVGD---- 201 (955)
T ss_pred HHHHHHHHHHHCCCCCC-CCHHH-HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEC----
T ss_conf 99999999986876004-32101-8999999999998862268887998898786389999960535797799957----
Q ss_pred CCHHHCCCCC--CEEEEEEECCCCEEECCEEE--ECCCCCCEEEE--EECCHHHHCCCCCCCCEEEEECCHHCCCCCC--
Q ss_conf 7867678556--57997420242022032035--02568614886--4011011025455685799970012001766--
Q gi|254780153|r 128 PDFSKVDFDR--DVVFVWNGTTSGVCVPDVGF--IPESREGLVIC--DATSAVFARHIDFNKLDVVTFSAQKVLGGEA-- 199 (391)
Q Consensus 128 ~~~~~~~~~~--~v~~~h~ETstGv~~~~~~~--~~~~~~~lliv--D~vSs~g~~p~d~~~iDv~~a~sQK~l~~pp-- 199 (391)
.++..... ..++++.=.+.|...+..+. .+|+.++++|| |-.|-..-.|--.++.|+++.++|- ||.|.
T Consensus 202 --~~~~~~~~d~~gvlvQyP~~~G~i~D~~~~~~~ah~~gal~iv~~D~laL~lLkpPGe~GADIaVGs~Qr-fGvPmgf 278 (955)
T PRK05367 202 --AAEALDHDDVFGVLLQYPGTSGEVRDYRALIAAAHAAGALVAVAADLLALTLLTPPGEMGADIAVGSAQR-FGVPMGF 278 (955)
T ss_pred --HHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCCCHHHCCCCEEEECCCC-CCCCCCC
T ss_conf --5656776777999997899888717879999999765978999746667752389666387679731666-6777667
Q ss_pred ---CCEEEEECHHHHHHHHHC-----CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCHH
Q ss_conf ---515445677888765411-----4457783123200112321033478644666448899999999-8620103189
Q gi|254780153|r 200 ---GFGIIILSPASVERLEKY-----VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-LWLKKMGGLS 270 (391)
Q Consensus 200 ---Gl~~v~~s~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-~~i~~~gGl~ 270 (391)
..+|...+++...++-.+ +.....+ -+.+....+...=++..-|-|-=.-..+.|.-.++ --..--.||.
T Consensus 279 GGPhagffA~~~~~~R~mPGRiVG~S~D~~G~~-ayrlaLQTREQHIRReKATSNICTaQaLLA~mA~~YAvYHGP~GLk 357 (955)
T PRK05367 279 GGPHAAYFATRDAYKRSMPGRIVGVSVDAAGNP-ALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLK 357 (955)
T ss_pred CCCCEEEEEECCCCCCCCCCCEEEEEECCCCCE-EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 886537888636641589975340366589697-5553001489998765201011477899999998896300899999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf 99999997799999998747971676688200365317898247310113734567888999998886282872665567
Q gi|254780153|r 271 ACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD 350 (391)
Q Consensus 271 ~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~ 350 (391)
++.+|...++..+.+.+++.+ +.. .+..+- -.+++.++.. ...+.....+.++-+. .
T Consensus 358 ~IA~rih~~a~~la~~l~~~G-~~v--~~~~fF--DTl~v~~~~~-------------a~~i~~~A~~~giNlr-----~ 414 (955)
T PRK05367 358 AIARRVHRLTAILAAGLKALG-FKL--VHDSFF--DTLTVEVGGD-------------AAAILARALAAGINLR-----R 414 (955)
T ss_pred HHHHHHHHHHHHHHHHHHHCC-CCC--CCCCCE--EEEEEECCCC-------------HHHHHHHHHHCCCEEE-----E
T ss_conf 999999999999999999789-844--578710--2799965855-------------9999999997697289-----8
Q ss_pred C-CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 6-7505686158889999999999999
Q gi|254780153|r 351 A-PLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 351 ~-~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
. .+.+.|+.--..+.+|+..|++.+.
T Consensus 415 ~d~~~v~iSlDEttt~~dl~~l~~~f~ 441 (955)
T PRK05367 415 VDDDAVGISLDETTTREDVAALLSVFG 441 (955)
T ss_pred ECCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 369969999358799999999999971
No 316
>KOG0256 consensus
Probab=96.86 E-value=0.039 Score=33.00 Aligned_cols=303 Identities=13% Similarity=0.107 Sum_probs=154.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHC--CCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCE
Q ss_conf 32898899999999999999968--8998579997487348999875320578970799707368888876532387630
Q gi|254780153|r 40 SHRCVLGKERINKAIQLTRKVLE--VPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDV 117 (391)
Q Consensus 40 sHRs~~f~~i~~~~~~~l~~l~~--~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~ 117 (391)
.|--+.|.+-+.+-++..+.==- -|+ . +.+++|+|+++|++..=|..||++.++-+-++++ |..+++-+.+.++
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v~fdP~--r-~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~g-fdrdl~~rTgvei 195 (471)
T KOG0256 120 YHGLPSFRQAVAEFMERARGNRVKFDPE--R-VVVTNGATSANETLMFCLADPGDAFLVPTPYYPG-FDRDLRWRTGVEI 195 (471)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCC--C-EEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCC-CCCCCEEECCCEE
T ss_conf 3475689999999999984898743765--6-6885575316677787625898510356899876-3220142038369
Q ss_pred EEE--ECCCCCCCCHHHCCCC-----------CCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEECC---HHHH
Q ss_conf 674--0577765786767855-----------657997420242022032035-----025686148864011---0110
Q gi|254780153|r 118 REF--TAPYGSLPDFSKVDFD-----------RDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDATS---AVFA 176 (391)
Q Consensus 118 ~~~--~~~~g~~~~~~~~~~~-----------~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~vS---s~g~ 176 (391)
.-+ ....|.-.+.+..+.+ +-+.++-=..--|+..+-+.. .+..++.-+|+|-+= -|+.
T Consensus 196 vpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~ 275 (471)
T KOG0256 196 VPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDK 275 (471)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHCCCCC
T ss_conf 99984067884122999999999999818952489982799977774699999999998864562798603210020366
Q ss_pred CC------------CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCC
Q ss_conf 25------------455685799970012001766515445677888765411445778312320011232103347864
Q gi|254780153|r 177 RH------------IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGET 244 (391)
Q Consensus 177 ~p------------~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (391)
-. ++.+.+.++|+ --|-|| -||+-+-++=-.--+.+ .-...+. ..+
T Consensus 276 ~~F~Sv~ev~~~~~~~~~rvHivys-lSKD~G-lpGfRvGviYs~ne~Vv-------------saA~kms-----sf~-- 333 (471)
T KOG0256 276 SEFRSVLEVRKDPHLDPDRVHIVYS-LSKDFG-LPGFRVGVIYSNNEDVV-------------SAATKMS-----SFG-- 333 (471)
T ss_pred CCCEEHHHHHHCCCCCCCCEEEEEE-ECCCCC-CCCEEEEEEEECCHHHH-------------HHHHHHH-----HCC--
T ss_conf 6713789875264568772799997-335569-88637899986673899-------------9999875-----036--
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf 46664488999999998620103189999999977999999987479716766882003653178982473101137345
Q gi|254780153|r 245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINS 324 (391)
Q Consensus 245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~ 324 (391)
.-.+-|..+.+--..=+|+.++ =+....+|-+.+-+.+-+++++.+. .++. +.....++.--...+.....+.
T Consensus 334 ~vSs~tQ~~la~LLSD~~f~~~-yl~en~~Rl~~rh~~~~~gLk~lgI-~cl~-----s~AGlF~wvDlr~lL~s~tfe~ 406 (471)
T KOG0256 334 LVSSQTQYLLASLLSDEEFTRE-YLRENNKRLRIRHRYIVEGLKALGI-PCLK-----SNAGLFCWVDLRKLLTSLTFEG 406 (471)
T ss_pred CCCHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCC-CEEE-----CCCCEEEEEEHHHHCCCCCHHH
T ss_conf 8758999999998430889999-9999999999999999754876488-4030-----6870699976677457578188
Q ss_pred HHHHHHHHHHHHHHC-CEEECCCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 678889999988862-82872665--567675056861588899999999999999999
Q gi|254780153|r 325 QKSFCKSMLSFLEKE-EIAYDIGS--YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 325 ~~~~~~~~~~~l~~~-g~~~~~~~--~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
+. .+-..+..+ ++-+..|. |...+.=|||= +....++.++-.++-|.....
T Consensus 407 El----~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvc-FAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256 407 EL----ELWERILDNVKLNLSPGSSCHCHEPGWFRVC-FANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HH----HHHHHHHHHHCCCCCCCCCCEECCCCEEEEE-ECCCCHHHHHHHHHHHHHHHH
T ss_conf 99----9999999860632579976243689858998-424887789999999999987
No 317
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase; InterPro: IPR004639 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamate-1-semialdehyde (GSA) aminotransferase (5.4.3.8 from EC), which catalyse a transamination reaction to produce 5-aminoaevulinic acid during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme has a high degree of similarity to amino acid transaminases, and is classed as a class III aminotransferase.; GO: 0042286 glutamate-1-semialdehyde 21-aminomutase activity, 0033014 tetrapyrrole biosynthetic process.
Probab=96.75 E-value=0.047 Score=32.44 Aligned_cols=212 Identities=17% Similarity=0.157 Sum_probs=128.2
Q ss_pred CCEEEEEEECCC---CEEECCEEE------ECCCCCCEEEEEEC-CHH-----HHCCCCCCCCEEEEECCHHCCCC-CCC
Q ss_conf 657997420242---022032035------02568614886401-101-----10254556857999700120017-665
Q gi|254780153|r 137 RDVVFVWNGTTS---GVCVPDVGF------IPESREGLVICDAT-SAV-----FARHIDFNKLDVVTFSAQKVLGG-EAG 200 (391)
Q Consensus 137 ~~v~~~h~ETst---Gv~~~~~~~------~~~~~~~llivD~v-Ss~-----g~~p~d~~~iDv~~a~sQK~l~~-ppG 200 (391)
..++-+=.|=+- |+..|..+. +|..+|.|+|.|=| +.| |+.++.-=.=|++ .-.|=||| -|
T Consensus 199 ~~iAgvIvEPv~GNmGvvpP~~eFL~~Lr~lt~e~g~LLI~DEV~TGFRva~~GAQ~yfgV~PDl~--~lGKI~GGGlP- 275 (434)
T TIGR00713 199 EEIAGVIVEPVAGNMGVVPPKKEFLEGLRELTEEYGALLIFDEVITGFRVALGGAQEYFGVEPDLT--TLGKIIGGGLP- 275 (434)
T ss_pred CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHCCHHHCCHHCCCCCCCE--EECHHHCCCCC-
T ss_conf 834378861202576664885223589999998729577550221012213321501137874103--42332337645-
Q ss_pred CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHH
Q ss_conf 154456778887654114457783123200112321033478644666448899999999862010-3189999999977
Q gi|254780153|r 201 FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM-GGLSACVERCNAN 279 (391)
Q Consensus 201 l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~-gGl~~~~~r~~~~ 279 (391)
++.+.-+++-.|++ .+.+.. +| -.|.+==|+. +-|-.++|+.++++ |=.+...+..++.
T Consensus 276 ~gA~gGrrEiM~~l---aP~G~v---------YQ-------AGTlsGNPla-m~AG~atLk~~~~~~~~Y~~l~~~~~~L 335 (434)
T TIGR00713 276 VGAFGGRREIMERL---APEGPV---------YQ-------AGTLSGNPLA-MAAGLATLKLLDEEKGVYTELDELAKRL 335 (434)
T ss_pred CEEECCCHHHHHHH---CCCCCC---------CC-------CCCCCCCHHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 10122675688431---788774---------45-------6435558899-9999999998534888348999999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEE
Q ss_conf 99999998747971676688200365317898-24731011373456788899999888628287266556767505686
Q gi|254780153|r 280 AAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVW 358 (391)
Q Consensus 280 a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg 358 (391)
++-+.+.+++.+.-. -+ -..-|...+-|. .+.+.....-..-+-.....+...+.++|+.+ .+..|=.+
T Consensus 336 ~~g~~e~l~~~gip~-~~--~~~gSMf~~FFtd~~~V~ny~~A~~SD~e~F~~Ff~~mL~~GVyl-------pPS~FEa~ 405 (434)
T TIGR00713 336 AEGLSEVLEDKGIPH-TV--NRVGSMFSLFFTDEEEVTNYADAKKSDTELFAKFFHEMLEKGVYL-------PPSQFEAC 405 (434)
T ss_pred HHHHHHHHHHCCCCE-EE--EECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-------CCCCHHHH
T ss_conf 999999998279858-99--504400456657788987889998861898899999998588878-------98721155
Q ss_pred -CCCCCCHHHHH----HHHHHHHHHHHH
Q ss_conf -15888999999----999999999999
Q gi|254780153|r 359 -VGVTVEKEDLL----LLCDWLRWVFYF 381 (391)
Q Consensus 359 -~~g~i~~~dv~----~L~~aLe~~~~~ 381 (391)
+--+.++|+|+ ..+++++.+|++
T Consensus 406 F~S~AH~~E~i~yaq~~ti~a~~~~f~~ 433 (434)
T TIGR00713 406 FISAAHTEEDIEYAQTNTIEAAEEVFAE 433 (434)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 5167777211789999999999999840
No 318
>TIGR00474 selA L-seryl-tRNA selenium transferase; InterPro: IPR004534 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homolog of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N-terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pyloriputative SelA.; GO: 0004125 L-seryl-tRNASec selenium transferase activity, 0001514 selenocysteine incorporation, 0005737 cytoplasm.
Probab=96.63 E-value=0.057 Score=31.91 Aligned_cols=300 Identities=15% Similarity=0.075 Sum_probs=143.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC-----HHHHHHHHHHH
Q ss_conf 3653289889999999999999996889985799974873489998753205789707997073-----68888876532
Q gi|254780153|r 37 LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES-----FGLGWMSDIRQ 111 (391)
Q Consensus 37 l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~-----~~~r~~~~~~~ 111 (391)
.+++||.....+++.++. +.. +..|++ . -+..++=+.+ ++..|+.+++.-|. =..|.-+...+
T Consensus 104 ~gRG~R~~~i~~lLc~lT-------gae-~~cvvn-N-na~avlL~l~--~~a~GKeVi~srGEL~eiGg~fRipdim~~ 171 (448)
T TIGR00474 104 GGRGHRDAHIEKLLCKLT-------GAE-DACVVN-N-NAAAVLLMLA--TLAKGKEVIISRGELVEIGGAFRIPDIMKQ 171 (448)
T ss_pred CCCCHHHHHHHHHHHHHC-------CCC-CCEEEE-C-HHHHHHHHHH--HHCCCCEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 575317899999987532-------862-330442-3-3899999999--960798799978865789875654488965
Q ss_pred CCCCCEEEEE-CCCCCCCC-HHHCCCCCCEEE-EEEE--CCCCEEEC--CEE--EECCCCCCEEEEEECCHHH------H
Q ss_conf 3876306740-57776578-676785565799-7420--24202203--203--5025686148864011011------0
Q gi|254780153|r 112 LSLQDVREFT-APYGSLPD-FSKVDFDRDVVF-VWNG--TTSGVCVP--DVG--FIPESREGLVICDATSAVF------A 176 (391)
Q Consensus 112 ~~~~~~~~~~-~~~g~~~~-~~~~~~~~~v~~-~h~E--TstGv~~~--~~~--~~~~~~~~llivD~vSs~g------~ 176 (391)
.| ...+.+. ..-...-| ...+...++..+ ||.+ ...|-... +.+ .+.+..++++++|.-|... +
T Consensus 172 ~g-~~l~eVGttn~t~~~Dy~~ai~~nTa~Lmkvh~sNf~~~gft~~~~eeeLv~LG~~~~~pv~~D~gSG~LvdL~~~g 250 (448)
T TIGR00474 172 AG-CELDEVGTTNRTHVKDYRVAITENTALLMKVHLSNFKIVGFTAKVKEEELVKLGKELDVPVVTDLGSGLLVDLSQYG 250 (448)
T ss_pred CC-CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHCC
T ss_conf 38-56510110120004467776531034444443016625652111577899973223377079987766212254416
Q ss_pred CCCC--------CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 2545--------56857999700120017665154456778887654114457783123200112321033478644666
Q gi|254780153|r 177 RHID--------FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP 248 (391)
Q Consensus 177 ~p~d--------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP 248 (391)
.|+| .-++|.|.+|.-|=|||| --|+++.+++.++++....-. +-+..++
T Consensus 251 L~~~eP~~~~~i~~G~dLVs~SgDKLLgGp-qaGiivGKKeli~ki~~~p~k----r~Lr~dk----------------- 308 (448)
T TIGR00474 251 LPKNEPNVQEAIALGVDLVSFSGDKLLGGP-QAGIIVGKKELIEKIQIHPLK----RALRADK----------------- 308 (448)
T ss_pred CCCCCCCCCHHHHCCCCEEECCCCCCCCCC-CCCEEECCHHHHHHHHHCCCC----EEHHCCH-----------------
T ss_conf 666889710688669857861651004676-503462307899998547862----2101241-----------------
Q ss_pred CHHHHHHHHHHHHHHHCC----CCH------HHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 448899999999862010----318------99999999779999999874797--167668820036531789824731
Q gi|254780153|r 249 SLLCIEDYIDALLWLKKM----GGL------SACVERCNANAAVLFQFIQENDW--IENLAVDETTRSNTSICMKIVDSD 316 (391)
Q Consensus 249 ~v~~i~al~~~l~~i~~~----gGl------~~~~~r~~~~a~~l~~~i~~~~~--~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391)
+ .+.++..+|+-+.+- +-+ ..-.+.-+.+++.|...+++..+ |..-+......--...-....+|.
T Consensus 309 ~--~LAGle~tLkly~~PEkl~E~ip~lr~ltr~~~~~~~~a~rL~~~L~~~~~~~f~i~i~~~~~~~G~gs~p~~~~pt 386 (448)
T TIGR00474 309 L--TLAGLEATLKLYLNPEKLLEKIPTLRLLTRAKKFLRIKAERLEKELKAIDGAEFNIQIVKERAQIGSGSLPVERLPT 386 (448)
T ss_pred H--HHHHHHHHHHHHCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 6--79999999974158024304421556530348899999999888750356882268886205788974365322663
Q ss_pred CCCCCHHHHH--HHHHHHHHHHHHCCE-EECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHH
Q ss_conf 0113734567--888999998886282-87266556767505686-158889999999999999
Q gi|254780153|r 317 IASLDINSQK--SFCKSMLSFLEKEEI-AYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 317 ~~~~~~~~~~--~~~~~~~~~l~~~g~-~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe 376 (391)
.+.....+.. .....+.+++..-.. +++. +.+-+.-||| .+=.+.-+|...++++|+
T Consensus 387 ~~v~~~~~~~~G~~l~~L~~r~~~~~~pv~Gr---PGa~~~~rl~Ld~R~~~~~D~~~i~~~l~ 447 (448)
T TIGR00474 387 IAVTILIEIGSGAKLENLSARYRILTIPVIGR---PGAIKSGRLWLDLRDLERIDDNTILKTLV 447 (448)
T ss_pred HHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 23111111067512799998618567774407---77761242113256788887999999833
No 319
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminase; InterPro: IPR004637 This is a very small family, with two known examples at the time of model creation. This enzyme is a pyridoxal phosphate-containing class III aminotransferase and is quite similar to 4-aminobutyrate aminotransferase (2.6.1.19 from EC). Diaminobutyrate-2-oxoglutarate transaminase (2.6.1.76 from EC) is a homotetramer which catalyses the conversion of L-2,4-diaminobutyrate and 2-oxoglutarate to L-glutamate and L-aspartic 4-semialdehyde during 1,3-diaminopropane biosynthesis.; GO: 0008483 transaminase activity, 0009058 biosynthetic process.
Probab=95.84 E-value=0.15 Score=29.29 Aligned_cols=325 Identities=16% Similarity=0.135 Sum_probs=167.1
Q ss_pred HHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHCC--CCCCEEEEECCCCHHHHHHHHH---HCCCCCCEEEEEECC
Q ss_conf 99986321036--5328988999999999999999688--9985799974873489998753---205789707997073
Q gi|254780153|r 28 SLGILEGALLG--RSHRCVLGKERINKAIQLTRKVLEV--PENYRIAIVPASDTGAVEMALW---SLLGYRGVDVLAWES 100 (391)
Q Consensus 28 v~~~~~~~~l~--~sHRs~~f~~i~~~~~~~l~~l~~~--p~~y~v~~l~GsgT~~~ea~~~---nl~~~~~~~~~~~g~ 100 (391)
+.+++...+=+ .-|-=.--..+=++-.+.|..++-- .++|.+.|.-=||--+.|+++- ...++..++-..+|.
T Consensus 60 ~~Q~~~~~l~~~~~~H~LDl~T~~K~~F~~~l~~~~~~~r~~~Y~l~F~GP~GA~a~EaA~KLA~~~TGR~~visF~~Gf 139 (445)
T TIGR00709 60 LKQKIKDVLQSGLPLHTLDLTTPLKDAFIEALLNILPKPRKEDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGF 139 (445)
T ss_pred HHHHHHHHHHHCCCEEEHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 99999999860785543002200027899999997068877631787188898535789999743117870047633885
Q ss_pred HHHHHHHHHHHCCCC-----------------CEEEEECCCCCCCCHH--H----C----CCC----CCEEEEEEECCCC
Q ss_conf 688888765323876-----------------3067405777657867--6----7----855----6579974202420
Q gi|254780153|r 101 FGLGWMSDIRQLSLQ-----------------DVREFTAPYGSLPDFS--K----V----DFD----RDVVFVWNGTTSG 149 (391)
Q Consensus 101 ~~~r~~~~~~~~~~~-----------------~~~~~~~~~g~~~~~~--~----~----~~~----~~v~~~h~ETstG 149 (391)
.|--. .-++-.++. ....+..|.|..=... . + +.. ..=+.+=.||..|
T Consensus 140 HGMT~-GaLa~TGN~~~~Na~~~~~~~~~~~PY~~~~~~P~G~GGeaG~~~~~~Y~ENF~~~~~SG~~KPAA~I~E~iQG 218 (445)
T TIGR00709 140 HGMTI-GALALTGNLFAKNAVEMLLPGVQFLPYPHEYRCPLGLGGEAGSNAVIEYFENFIEDVESGVDKPAAVILEAIQG 218 (445)
T ss_pred CHHHH-HHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC
T ss_conf 10122-13665224200012455677762278842324766677034467899998775413667765760468863307
Q ss_pred ---EE-EC-----CEEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCC-CCCCEEEEECHHHHH
Q ss_conf ---22-03-----2035025686148864011011025---4--55685--7999700120017-665154456778887
Q gi|254780153|r 150 ---VC-VP-----DVGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGG-EAGFGIIILSPASVE 212 (391)
Q Consensus 150 ---v~-~~-----~~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~-ppGl~~v~~s~~al~ 212 (391)
+. -| ..+.++.++++++|+|-|++=.++- + +..+| |+++.| |++|| -.=|+++.++++
T Consensus 219 EGG~~~A~~~wL~~i~~v~~~~~I~lIlD~VQAG~~R~G~~FaFE~AGI~PD~v~~S--KavGGng~PLAv~~i~~~--- 293 (445)
T TIGR00709 219 EGGVVAAPVEWLQKIREVTRKHDIKLILDEVQAGFGRSGKMFAFEHAGIEPDVVVLS--KAVGGNGLPLAVLLIKKE--- 293 (445)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEE--CCCCCCCHHHHHHHHHHH---
T ss_conf 885102247999999998742784799822345701255511002478986768983--033888506888776343---
Q ss_pred HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 65411445778312320011232103347864466644889999999986201031899999999779999999874797
Q gi|254780153|r 213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW 292 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~ 292 (391)
|+. ++...+..| |-=+-+.+.--..+|+.++++-=-++..+|.++....|.+-+.+.+
T Consensus 294 ----------------fD~----~~Pa~H~GT-FRGN~lA~~TG~~~L~~~kd~~L~~N~QE~~E~~t~~L~~~~K~~P- 351 (445)
T TIGR00709 294 ----------------FDA----WQPAGHTGT-FRGNQLAMVTGLEALNIIKDDNLAQNAQERGERITSFLDDLIKEYP- 351 (445)
T ss_pred ----------------CCC----CCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf ----------------045----688986655-4301578888899999888766765554446789999999987378-
Q ss_pred CCCCCCCCC-CCCCCEEEEEECCC-CCCCC-CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf 167668820-03653178982473-10113-7345678889999988862828726655676750568615888999999
Q gi|254780153|r 293 IENLAVDET-TRSNTSICMKIVDS-DIASL-DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLL 369 (391)
Q Consensus 293 ~~~~~~~~~-~rS~~~v~~~~~d~-~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~ 369 (391)
...+-. -|..+.-.-.+.+. ..+.. ....+......+.+++-+++.+...+|- -+..||+=+--.|+.++++
T Consensus 352 ---~~~~VRkGRGlM~Gi~~~~E~~~~D~~G~~P~D~~LA~~I~~~CF~~~LllE~~G~--~~~V~~ll~p~~I~~~~~~ 426 (445)
T TIGR00709 352 ---CIGNVRKGRGLMIGIEIVDERKSKDAIGAYPADSELAAAIQGACFENGLLLEKGGR--EGEVVRLLCPITIDQEELE 426 (445)
T ss_pred ---CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC--CCCEEEEECCEEECHHHHH
T ss_conf ---54762056633541321025774222478862148999998632205733430689--9736897066032456689
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998
Q gi|254780153|r 370 LLCDWLRWVFYFQKIS 385 (391)
Q Consensus 370 ~L~~aLe~~~~~~k~~ 385 (391)
..+.-++.+..++-..
T Consensus 427 ~~~~~~~~av~e~~~~ 442 (445)
T TIGR00709 427 EVISRLKQAVEEALAE 442 (445)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999987
No 320
>KOG0629 consensus
Probab=95.81 E-value=0.15 Score=29.21 Aligned_cols=338 Identities=13% Similarity=0.083 Sum_probs=181.8
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH----HCCC---CCC----EE
Q ss_conf 899998632103653289889999999999999996889985799974873489998753----2057---897----07
Q gi|254780153|r 26 GWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW----SLLG---YRG----VD 94 (391)
Q Consensus 26 ~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~----nl~~---~~~----~~ 94 (391)
+|.-+.+...+. +.---|-|.-+=.++...++++-+-+..-.=+|-+||++.-|-++.. ++.+ .|- .+
T Consensus 120 ~wlT~t~Ntn~~-TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~l 198 (510)
T KOG0629 120 EWLTSTANTNMF-TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPL 198 (510)
T ss_pred HHHHHCCCCCCC-EEEECCEEEEEHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
T ss_conf 999850478863-3884232775269999999998387778886536884067789998887611842443002038857
Q ss_pred EEEE---CCHHHHHHHHHHHCCCCCEEEEEC-CCCCCCCHHHCCC-------C----CCEEEEEEECCCCEEECCEEE--
Q ss_conf 9970---736888887653238763067405-7776578676785-------5----657997420242022032035--
Q gi|254780153|r 95 VLAW---ESFGLGWMSDIRQLSLQDVREFTA-PYGSLPDFSKVDF-------D----RDVVFVWNGTTSGVCVPDVGF-- 157 (391)
Q Consensus 95 ~~~~---g~~~~r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~-------~----~~v~~~h~ETstGv~~~~~~~-- 157 (391)
++-+ ..||-+-+......+--++..+.. .-|+. .+++++. . -.|..+-..|+.|..-|+..+
T Consensus 199 ilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm-~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iad 277 (510)
T KOG0629 199 ILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKM-IPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIAD 277 (510)
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC-CHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHH
T ss_conf 8984242012499999985668750688325556865-669999999988854899759982478666424586788999
Q ss_pred ECCCCCCEEEEEECCHHHH-CC------CC-CCCCEEEEECCHHCCCCCCCCEEEEECHHH-HHHHHHCCCCC----CCC
Q ss_conf 0256861488640110110-25------45-568579997001200176651544567788-87654114457----783
Q gi|254780153|r 158 IPESREGLVICDATSAVFA-RH------ID-FNKLDVVTFSAQKVLGGEAGFGIIILSPAS-VERLEKYVPSW----PLP 224 (391)
Q Consensus 158 ~~~~~~~llivD~vSs~g~-~p------~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a-l~~~~~~~~~~----~~~ 224 (391)
+|..++.-+=|||.=.=|. ++ +. .+..|-+--..+|-+|.|=--+....+++- ++++....... ...
T Consensus 278 iC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~ 357 (510)
T KOG0629 278 ICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKF 357 (510)
T ss_pred HHHHCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCE
T ss_conf 98754879995100055512475557640575325741166788645861245799887778876402002443146856
Q ss_pred CHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCC
Q ss_conf 123200112321033478644666448899999999862010318999999997799999998747971676688-2003
Q gi|254780153|r 225 KIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD-ETTR 303 (391)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~-~~~r 303 (391)
...+++.-.+..+..+ --++|-++.+-. .+-..|.++...++-++++.+++.+...+++..+... ++
T Consensus 358 YdvS~DTgdK~iQCGR------h~D~FKlWlmwk----aKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe-- 425 (510)
T KOG0629 358 YDVSYDTGDKAIQCGR------HVDVFKLWLMWK----AKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE-- 425 (510)
T ss_pred EECCCCCCCCHHHCCC------CCCHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCC--
T ss_conf 5210035630332476------542999999997----3256258999999999999999998726561110137875--
Q ss_pred CCCEEEEEECCCCCCCCCHHHHH-----HHHHHHHHHHHHCCEEECCCCCCC--CCCEEEEECCC-CCCHHHHHHHHHHH
Q ss_conf 65317898247310113734567-----888999998886282872665567--67505686158-88999999999999
Q gi|254780153|r 304 SNTSICMKIVDSDIASLDINSQK-----SFCKSMLSFLEKEEIAYDIGSYRD--APLGLRVWVGV-TVEKEDLLLLCDWL 375 (391)
Q Consensus 304 S~~~v~~~~~d~~~~~~~~~~~~-----~~~~~~~~~l~~~g~~~~~~~~r~--~~~~~RIg~~g-~i~~~dv~~L~~aL 375 (391)
.+|++|-..++.+.......+. ++.-.+.....+ .+-..++.++. .+.=||...-+ +++..|++-|++.|
T Consensus 426 -~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~-~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEI 503 (510)
T KOG0629 426 -HVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMK-KGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEI 503 (510)
T ss_pred -EEEEEECCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHH-CCCEEEEECCCCCCCCHHHEECCCCHHHHHHHHHHHHHH
T ss_conf -478750458667616864603666777407087999975-454356754355544413112156101146588899999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 376 RWVF 379 (391)
Q Consensus 376 e~~~ 379 (391)
|..-
T Consensus 504 erlg 507 (510)
T KOG0629 504 ERLG 507 (510)
T ss_pred HHHC
T ss_conf 8751
No 321
>KOG1358 consensus
Probab=95.41 E-value=0.21 Score=28.29 Aligned_cols=288 Identities=14% Similarity=0.102 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC-HHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 9999999999996889985799974873489998753205789707997073-688888765323876306740577765
Q gi|254780153|r 49 RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES-FGLGWMSDIRQLSLQDVREFTAPYGSL 127 (391)
Q Consensus 49 i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~-~~~r~~~~~~~~~~~~~~~~~~~~g~~ 127 (391)
+.-+...+|.+++++++ .++. +-|-..++.++--+..+||..+...+. |.-...-++.+ .....+.....
T Consensus 140 vHldlE~~iakF~G~E~--aivY--s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSR-----S~i~~Fkhndm 210 (467)
T KOG1358 140 VHLDLEKRIAKFMGTED--AIVY--SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSR-----STISYFKHNDM 210 (467)
T ss_pred EECCCHHHHHHHHCCCC--EEEE--CCCCCHHHHCCHHHHCCCCEEEEEHHHHHHHHHHHHHHH-----HEEEEECCCCH
T ss_conf 10466778987508864--2663--266300320001231147679986210299887776402-----00378547887
Q ss_pred CCHHH---------CCCCC--C-EEEEEEE---CCCCEEECCEEEE--CCCCCCEEEEEECCHHHHC---------C--C
Q ss_conf 78676---------78556--5-7997420---2420220320350--2568614886401101102---------5--4
Q gi|254780153|r 128 PDFSK---------VDFDR--D-VVFVWNG---TTSGVCVPDVGFI--PESREGLVICDATSAVFAR---------H--I 179 (391)
Q Consensus 128 ~~~~~---------~~~~~--~-v~~~h~E---TstGv~~~~~~~~--~~~~~~llivD~vSs~g~~---------p--~ 179 (391)
.+++. .+..+ . --|.+.| -.+|-+.|..+++ ..++...+++|-+=|||.. . +
T Consensus 211 ~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v 290 (467)
T KOG1358 211 EDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGV 290 (467)
T ss_pred HHHHHHCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 88997545762223314444541379999764047775035099999876625899983333324303568663246898
Q ss_pred CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 55685799970012001766515445677888765411445778312320011232103347864466644889999999
Q gi|254780153|r 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDA 259 (391)
Q Consensus 180 d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~ 259 (391)
+...+|++.++---+|+.-. +|+..+.-..+ .+.+.... ..| -.-+||...- +..++
T Consensus 291 ~~~~iDiv~~sm~~alas~G--gFc~G~~~i~~-hQrLSg~~---Y~f----------------SAslPp~la~-aa~~a 347 (467)
T KOG1358 291 PITDIDIVTASMETALASGG--GFCAGKSFIAD-HQRLSGSG---YCF----------------SASLPPYLAG-AAIKA 347 (467)
T ss_pred CCCCEEEEEECCCCCCCCCC--CEEECCEEEEE-EEECCCCC---EEE----------------ECCCCHHHHH-HHHHH
T ss_conf 80311256511444431467--54325523675-30015662---565----------------1347555545-67777
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 98620103189999999977999999987479716766882003653178982473101137345678889999988862
Q gi|254780153|r 260 LLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE 339 (391)
Q Consensus 260 l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~ 339 (391)
++.++.+.+ +++.-+.++..+.+.+....++.. . -+.-|++.. ++..++. ...+.+.+....++...-.+
T Consensus 348 i~i~~~~p~---~~~~L~~k~~~~H~~l~~~s~~~v-~--~~~~SPi~h-l~l~~~~---~s~e~e~~lL~eivd~~i~~ 417 (467)
T KOG1358 348 ILIEEWNPE---IVQPLRAKVAKFHAALSSNSGFIV-S--GSPESPIIH-LQLERSY---GSREKEEKLLEEIVDKCIAE 417 (467)
T ss_pred HHHHHHCCC---HHHHHHCCCCCCCHHHHCCCCEEE-E--CCCCCCEEE-EEECCCC---CCHHHHHHHHHHHHHHHHHH
T ss_conf 777761840---222222025210466604772598-4--686772001-2324555---66677999999999999862
Q ss_pred CEEECCCCC------CCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 828726655------676750568615888999999999999999
Q gi|254780153|r 340 EIAYDIGSY------RDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 340 g~~~~~~~~------r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
+..+--..| ...++++||-+-...++++++++.+.|+.+
T Consensus 418 ~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~ 462 (467)
T KOG1358 418 GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEV 462 (467)
T ss_pred CCEEHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 531003145530334799985799870799999999999999999
No 322
>KOG0259 consensus
Probab=94.82 E-value=0.32 Score=27.21 Aligned_cols=275 Identities=16% Similarity=0.096 Sum_probs=144.4
Q ss_pred EEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCC--CCCHHHCC----CCCCEEEEE
Q ss_conf 997487348999875320578970799707368888876532387630674057776--57867678----556579974
Q gi|254780153|r 70 AIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGS--LPDFSKVD----FDRDVVFVW 143 (391)
Q Consensus 70 ~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~----~~~~v~~~h 143 (391)
+++++|-+.|.|.++..|..++.-.++--=+|-- ....++..+.++..++.-..+ ..|++.++ +.+...++-
T Consensus 129 V~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~--Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~Aivvi 206 (447)
T KOG0259 129 VVLTSGCSQAIELAISSLANPGANILLPRPGFPL--YDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVI 206 (447)
T ss_pred EEEECCCHHHHHHHHHHHCCCCCCEECCCCCCCH--HHHHHHHCCCEEEEECCCCCCCCEECHHHHHHHHCCCEEEEEEE
T ss_conf 6995563699999999743899866547999846--88766325843676325676561531688997644670699996
Q ss_pred E-ECCCCEEECC---EE--EECCCCCCEEEEEEC---CHHHHCCC-CCCCCE----E-EEECCHHCCCCCCCCEE--EEE
Q ss_conf 2-0242022032---03--502568614886401---10110254-556857----9-99700120017665154--456
Q gi|254780153|r 144 N-GTTSGVCVPD---VG--FIPESREGLVICDAT---SAVFARHI-DFNKLD----V-VTFSAQKVLGGEAGFGI--IIL 206 (391)
Q Consensus 144 ~-ETstGv~~~~---~~--~~~~~~~~llivD~v---Ss~g~~p~-d~~~iD----v-~~a~sQK~l~~ppGl~~--v~~ 206 (391)
| ..-+|-.+.. .. ..++..+.++|.|-+ .-||+-|+ .+.++. | ...|--|.+. .||--+ +++
T Consensus 207 NP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~-VPGWRlGWi~~ 285 (447)
T KOG0259 207 NPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWI-VPGWRLGWIAL 285 (447)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHCCEEECCCCCCCCHHHCCCCCCEEEECCCCCCCC-CCCCEEEEEEE
T ss_conf 79999865151999999999999849769761112313317997300133056573686154235640-47730346897
Q ss_pred CHHHHHHHHHCCCCCCCCCHHH-CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 7788876541144577831232-001123210334786446664488999999998620103189999999977999999
Q gi|254780153|r 207 SPASVERLEKYVPSWPLPKIFR-MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQ 285 (391)
Q Consensus 207 s~~al~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~ 285 (391)
.+ +.+ ....-. .....+ .-+...-|++..=-|+-.-|+.--++ =.++...--+.+++..|+
T Consensus 286 hD----------~~g-vf~~~~~~q~~~~------~~~~~~~p~TiiQ~AlP~IL~kTp~e-fF~k~~~~lk~na~l~y~ 347 (447)
T KOG0259 286 HD----------PRG-VFRDTKVVQGIKN------FLDIIPGPATIIQGALPDILEKTPEE-FFDKKLSFLKSNADLCYS 347 (447)
T ss_pred EC----------CCC-CCCCHHHHHHHHH------HHHCCCCCCHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHH
T ss_conf 56----------665-4244189999999------98545995085987758898748399-999999998762799999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH-HCCEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 9874797167668820036531789824731011373456788899999888-628287266556767505686158889
Q gi|254780153|r 286 FIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLE-KEEIAYDIGSYRDAPLGLRVWVGVTVE 364 (391)
Q Consensus 286 ~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~~~~r~~~~~~RIg~~g~i~ 364 (391)
++...+.+...+ .|+....+-+ .+.-..+. +...+- ++...|. +|++++--|.--..+.-+||...- +
T Consensus 348 ~Lk~IP~l~cp~-kPeg~mylmv--~l~~s~~~--~~~dD~----dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~--~ 416 (447)
T KOG0259 348 RLKDIPCLTCPV-KPEGCMYLMV--KLNLSLFP--DIEDDV----DFCQKLAREESVICLPGQAFGLKNWLRIVITV--E 416 (447)
T ss_pred HHHCCCCCCCCC-CCCCCEEEEE--CCCHHHHC--CCCCCH----HHHHHHHHHCCEEEECCCCCCCCCEEEEEECC--C
T ss_conf 984598766675-8875158985--26665400--224508----99999863142687251203678848999705--7
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780153|r 365 KEDLLLLCDWLR 376 (391)
Q Consensus 365 ~~dv~~L~~aLe 376 (391)
.+.++-..+-|+
T Consensus 417 ~~~leea~~Rik 428 (447)
T KOG0259 417 EEMLEEAFSRIK 428 (447)
T ss_pred HHHHHHHHHHHH
T ss_conf 378999999999
No 323
>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=94.74 E-value=0.33 Score=27.08 Aligned_cols=166 Identities=17% Similarity=0.134 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHH-HHHHHHCCCCCEEEE
Q ss_conf 9889999999999999996889985799974873489998753205789-70799707368888-876532387630674
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGW-MSDIRQLSLQDVREF 120 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~-~~~~~~~~~~~~~~~ 120 (391)
|.-..++.+.+...+-+++++++--.+++++ =+||.=-++.+.+.... ..-+++|-.--++- ++-+...+ ....++
T Consensus 51 sSll~kLTn~l~~d~lr~~G~~s~~~~~vvP-~aTGMsl~~~L~~~~~rp~a~yViw~RiDqKSc~Kai~~AG-l~p~vV 128 (389)
T pfam05889 51 SSVLAKLTNELVKDFLKLLGLREVKNCFVVP-LATGMSLLCMLSWRRKRPKAKYVIWPRIDQKSSIKAAERAG-FEPRLV 128 (389)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC-CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC-CEEEEE
T ss_conf 1899999999999999982974316578950-41047999999998558899789986355522689999769-714887
Q ss_pred E---CCCCCCCCHHHCCC------CCCEEEEEEECCCCE-EECC----EEEECCCCCCEEEEEEC---CH-HHHCCCC--
Q ss_conf 0---57776578676785------565799742024202-2032----03502568614886401---10-1102545--
Q gi|254780153|r 121 T---APYGSLPDFSKVDF------DRDVVFVWNGTTSGV-CVPD----VGFIPESREGLVICDAT---SA-VFARHID-- 180 (391)
Q Consensus 121 ~---~~~g~~~~~~~~~~------~~~v~~~h~ETstGv-~~~~----~~~~~~~~~~llivD~v---Ss-~g~~p~d-- 180 (391)
+ .+..-..+.+.++. .+.+..++..||.=. .+|. .+.+|..++++-||-.. ++ .....++
T Consensus 129 e~~~~~d~l~Td~~~ie~~i~~~g~~~ilcVlsTTScFaPR~pD~v~~IAklC~~~~IpHvVNnAYGlQ~~~~~~~i~~a 208 (389)
T pfam05889 129 ETVLDGDYLITDVNDVETIIEEKGEEVILAVLSTTSCFAPRSPDNVKEIAKICAEYDVPHLVNGAYGIQSEETIRLIAAA 208 (389)
T ss_pred EEEECCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
T ss_conf 52522882435899999999983877668998446656999966799999999974997478430366179999999999
Q ss_pred --CCCCEEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf --568579997001200176651544567788
Q gi|254780153|r 181 --FNKLDVVTFSAQKVLGGEAGFGIIILSPAS 210 (391)
Q Consensus 181 --~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a 210 (391)
.-.+|+++-|.-|||..|-|=++++-+.+-
T Consensus 209 ~r~GRVDa~VQStDKNflVPVGGaIIas~d~~ 240 (389)
T pfam05889 209 HECGRVDAVVQSLDKNFIVPVGGAIIAAFDES 240 (389)
T ss_pred HHCCCCEEEEEECCCCEEEECCCEEEEECCHH
T ss_conf 86388218997068662553487489708889
No 324
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase; InterPro: IPR006233 Cystathionine beta-lyase (alternate name: beta-cystathionase) is one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys .; GO: 0004121 cystathionine beta-lyase activity, 0006520 amino acid metabolic process, 0005737 cytoplasm.
Probab=94.55 E-value=0.37 Score=26.79 Aligned_cols=296 Identities=16% Similarity=0.176 Sum_probs=174.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHHCCCCC
Q ss_conf 532898899999999999999968899857999748734899987532057897079970736--888887653238763
Q gi|254780153|r 39 RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF--GLGWMSDIRQLSLQD 116 (391)
Q Consensus 39 ~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~--~~r~~~~~~~~~~~~ 116 (391)
+.-|+-.-..-+++++ .++=|.- -+.+.+ ||+.|+...++.+++.||.++++...| -+++...+.++-+.+
T Consensus 49 YG~rGt~T~~ALq~a~---~elEG~a---g~~lyP-sGlAAvT~~~LafvkaGDhvL~vdsaY~PTr~Fcd~vLkr~gv~ 121 (389)
T TIGR01324 49 YGIRGTLTTVALQDAL---AELEGAA---GVILYP-SGLAAVTNALLAFVKAGDHVLVVDSAYKPTRRFCDIVLKRLGVE 121 (389)
T ss_pred CCCCCCCHHHHHHHHH---HHHCCCC---CEEEEC-CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCEE
T ss_conf 1346875388999999---9724777---607624-75578889999887438837986464611589998875363445
Q ss_pred EEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEE---ECC--CCCCEEEEEECCHHHH--CCCCCCCCEEEEE
Q ss_conf 06740577765786767855657997420242022032035---025--6861488640110110--2545568579997
Q gi|254780153|r 117 VREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGF---IPE--SREGLVICDATSAVFA--RHIDFNKLDVVTF 189 (391)
Q Consensus 117 ~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~---~~~--~~~~llivD~vSs~g~--~p~d~~~iDv~~a 189 (391)
++-++...|..--..-+...+.|.++=.=.|...+.+..+. .++ .+++++++|=+=+.|- .|++ .++|+-+-
T Consensus 122 ~~YYDP~igPe~ia~Li~pnTkv~flEaP~S~TfE~qDIPaIakaA~kv~~g~~~miDNTWaagllFkpL~-HgvdiSiq 200 (389)
T TIGR01324 122 VEYYDPKIGPEDIAALIKPNTKVVFLEAPASLTFEVQDIPAIAKAARKVAAGVVVMIDNTWAAGLLFKPLE-HGVDISIQ 200 (389)
T ss_pred EEEECCCCCHHHHHHHCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCC-CCCCEEEE
T ss_conf 88727886888898740888448998378745103588468999986418982999636302001023001-78636875
Q ss_pred CCHHCCCCCCC--CEEEEECHHHHHHHH-HCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 00120017665--154456778887654-114457783123200112321033478644666448899999999862010
Q gi|254780153|r 190 SAQKVLGGEAG--FGIIILSPASVERLE-KYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM 266 (391)
Q Consensus 190 ~sQK~l~~ppG--l~~v~~s~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~ 266 (391)
+.-|=++|-+= +|=|..++++|+++. +. .+ . -|+.-..- ..|....-|+
T Consensus 201 A~TKY~~GHSD~~~Gtv~an~~~w~qL~Ge~--~~------~------------~G~~v~~D---daYt~lRGlR----- 252 (389)
T TIGR01324 201 AATKYLAGHSDVLLGTVAANEDAWEQLLGEA--SY------L------------LGQSVDAD---DAYTVLRGLR----- 252 (389)
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHHCCHH--HH------H------------CCCCCCCC---HHHHHHHHHH-----
T ss_conf 0335575500245634775578998751202--44------4------------16434753---4888886565-----
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--------------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 31899999999779999999874797167668820--------------0365317898247310113734567888999
Q gi|254780153|r 267 GGLSACVERCNANAAVLFQFIQENDWIENLAVDET--------------TRSNTSICMKIVDSDIASLDINSQKSFCKSM 332 (391)
Q Consensus 267 gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~--------------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 332 (391)
.+.-|.+||++++=.+-.||+.-+...-. -.|. .=|.....+.+..+ --.+..+.+
T Consensus 253 -TlgvRL~~Hqes~laiA~WL~eqpeVarV-lHPALPs~pgH~~wkRDF~GssGlFs~vLt~~--------~~~k~vhaF 322 (389)
T TIGR01324 253 -TLGVRLKRHQESALAIAKWLEEQPEVARV-LHPALPSDPGHELWKRDFSGSSGLFSVVLTKR--------LSQKEVHAF 322 (389)
T ss_pred -HHHHHHHHHHHHHHHHHHHHCCCCCCCEE-ECCCCCCCCCCCCCCCCCCCCCCCCEEEECCC--------CCHHHHHHH
T ss_conf -66432577666689999864379965555-57786228873322112255654410237479--------886789999
Q ss_pred HHHHHHCCEEECCCCCCCCC-----C--E-EEEECCCCC---------CHHHHHHHHHHHHHHHH
Q ss_conf 99888628287266556767-----5--0-568615888---------99999999999999999
Q gi|254780153|r 333 LSFLEKEEIAYDIGSYRDAP-----L--G-LRVWVGVTV---------EKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 333 ~~~l~~~g~~~~~~~~r~~~-----~--~-~RIg~~g~i---------~~~dv~~L~~aLe~~~~ 380 (391)
...|.-.+..|..|||=+.- . + +|...=+.. =.||||.|..=|.-.|+
T Consensus 323 lD~l~lFglgySWGGyESLal~~~p~e~~h~r~~ik~~leGpLiR~hIGlE~vddLkADl~~Gfe 387 (389)
T TIGR01324 323 LDALKLFGLGYSWGGYESLALNVDPEELAHIRRSIKRDLEGPLIRLHIGLEDVDDLKADLKAGFE 387 (389)
T ss_pred HHHHHHHHHHCCCCCHHHEEEECCHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 87888876211300010101207866640001227778987667897066875789999998774
No 325
>KOG2040 consensus
Probab=93.96 E-value=0.49 Score=26.02 Aligned_cols=283 Identities=16% Similarity=0.121 Sum_probs=127.0
Q ss_pred HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC
Q ss_conf 999996889985799974873489998753205-7897079970736888887653238763067405777657867678
Q gi|254780153|r 56 LTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD 134 (391)
Q Consensus 56 ~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 134 (391)
.+..+-+.|-..--+ + --||.+=||+.+..- .++.+.++...-.-+-..-.-.+..+..+.+. ..+..+.+
T Consensus 171 mi~dlTGL~~aNASL-L-DEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~------~~~~~~~~ 242 (1001)
T KOG2040 171 MITDLTGLPMANASL-L-DEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVV------VSDIKEAD 242 (1001)
T ss_pred HHHHCCCCCCCCHHH-H-CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCEEEE------ECCHHHHH
T ss_conf 766502886554233-2-131258999999876322642886587783332465203666533688------44778720
Q ss_pred C-CCCE--EEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCC----CCCCCEEEEECCHHCCCCCCCCE---
Q ss_conf 5-5657--997420242022032035--0256861488640110110254----55685799970012001766515---
Q gi|254780153|r 135 F-DRDV--VFVWNGTTSGVCVPDVGF--IPESREGLVICDATSAVFARHI----DFNKLDVVTFSAQKVLGGEAGFG--- 202 (391)
Q Consensus 135 ~-~~~v--~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~----d~~~iDv~~a~sQK~l~~ppGl~--- 202 (391)
. .++| .+++--...|-..+-.+. .++..+.+ |=+.+++.+.-+ -.++.|+.+.+||. ||.|=|.+
T Consensus 243 ~s~~~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~--vv~atDLLaLtiLrpPgefGaDIavGSsQR-FGVPlGYGGPH 319 (1001)
T KOG2040 243 YSSKDVSGVLVQYPDTEGSVLDFDELVELAHANGSL--VVMATDLLALTILRPPGEFGADIAVGSSQR-FGVPLGYGGPH 319 (1001)
T ss_pred CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCE--EEEEHHHHHHHCCCCHHHCCCEEEECCCCC-CCCCCCCCCCH
T ss_conf 233552169997588777607889999976306855--898402568870278233284146414321-37655678840
Q ss_pred --EEEECHHHHHHHHHC----CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH----HHHHHHCCCCHHHH
Q ss_conf --445677888765411----44577831232001123210334786446664488999999----99862010318999
Q gi|254780153|r 203 --IIILSPASVERLEKY----VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYID----ALLWLKKMGGLSAC 272 (391)
Q Consensus 203 --~v~~s~~al~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~----~l~~i~~~gGl~~~ 272 (391)
|..+++.....+... .....--.-+.+...... +..++. -.|-++-.--+|.. .--.+.--.|++++
T Consensus 320 AaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTRE-QHIrRD--KATSNICTAQALLANmaAmyaiYHGp~gL~~I 396 (1001)
T KOG2040 320 AAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTRE-QHIRRD--KATSNICTAQALLANMAAMYAIYHGPHGLKEI 396 (1001)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH-HHHHHH--CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 889999999974389735755305666688999888899-887632--01001467999998778777543083789999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC
Q ss_conf 99999779999999874797167668820036531789824731011373456788899999888628287266556767
Q gi|254780153|r 273 VERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP 352 (391)
Q Consensus 273 ~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~ 352 (391)
.+|.......+-.++++.+ .+ ++ ++.+-- ...+++... .+++..+-.++.+-+ |.+.
T Consensus 397 Arrvh~~T~~l~~~l~~ag-he-l~-~k~fFD--TLkI~~~~s-------------~~~~l~rA~~~~iNl-----r~~e 453 (1001)
T KOG2040 397 ARRVHNLTLILAEGLKNAG-HE-LQ-HKPFFD--TLKIRCGCS-------------AEEVLDRAAKRQINL-----RLVE 453 (1001)
T ss_pred HHHHHHHHHHHHHHHHHCC-HH-HC-CCCCCC--EEEEEECCC-------------HHHHHHHHHHHCCCE-----EEEE
T ss_conf 9998889999999876336-23-30-455300--379883685-------------999999998623665-----9960
Q ss_pred C-EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 5-0568615888999999999999
Q gi|254780153|r 353 L-GLRVWVGVTVEKEDLLLLCDWL 375 (391)
Q Consensus 353 ~-~~RIg~~g~i~~~dv~~L~~aL 375 (391)
. .+-++.=-+++.+||+.|+...
T Consensus 454 d~tigvslDETv~~~DvddLl~vf 477 (1001)
T KOG2040 454 DGTIGVSLDETVTEKDVDDLLWVF 477 (1001)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 684368604435387799999997
No 326
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase; InterPro: IPR011821 Proteins in this entry are important in the interconversion of the sulphur-containing amino acids L-cysteine and L-methionine in bacteria. In bacteria, inorganic sulphur is reduced to sulphide, which is then used to displace the acetyl group of O-acetyl-L-serine to form the essential amino acid L-cysteine. Biosynthesis of L-methionine then occurs via the transsulphuration pathway which involves the sequential action of two pyridoxal 5'-phosphate (PLP) enzymes, cystathionine gamma-synthase (CGS) and cystathionine beta-lyase (CBL). Firstly CGS catalyses the formation of the intermediate cystathione from a homoserine ester and L-cysteine. This intermediate is then converted by CBL to L-homoserine, which is subsequently methylated by methionine synthase to form L-methionine. For more information see . The CGS enzyme (P00935 from SWISSPROT) from Escherichia coli is, like other CGS enzymes, a homotetramer composed of two catalytically active dimers . The active site of each dimer is found at the interface between the monomers and involves residues from each monomer. Catalysis occurs by alpha,gamma-elimination/replacement reactions..
Probab=92.87 E-value=0.73 Score=24.91 Aligned_cols=286 Identities=18% Similarity=0.187 Sum_probs=164.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE---EECCHHHHHHHHHHHCCCC
Q ss_conf 5328988999999999999999688998579997487348999875320578970799---7073688888765323876
Q gi|254780153|r 39 RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL---AWESFGLGWMSDIRQLSLQ 115 (391)
Q Consensus 39 ~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~---~~g~~~~r~~~~~~~~~~~ 115 (391)
+|=|+.+-.+|++++...|- +- + . .++|.||+.|+.-+..-+++++|.++. .+|+ +.|..+-.++.+..
T Consensus 45 YsRsGNPTRd~l~~aLA~LE---~G-~--~-AVvT~~GMsAI~L~~~~lL~pdDLlvAPHDCYGG-tYRLl~~lA~kG~~ 116 (383)
T TIGR02080 45 YSRSGNPTRDILQQALAELE---GG-A--G-AVVTNSGMSAIDLVTTALLGPDDLLVAPHDCYGG-TYRLLNALAKKGQF 116 (383)
T ss_pred CCCCCCCCHHHHHHHHHHHH---CC-C--C-CEECCCHHHHHHHHHHHEECCCCEEEECCCCCCC-HHHHHHHHHHCCCE
T ss_conf 68898975658999999984---89-9--8-2566856898876643120789768804326770-48888645207833
Q ss_pred CEEEEECCCCCCCCHHHCC---CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEEEC--CHHHHCCCCCCCCE
Q ss_conf 3067405777657867678---55657997420242022032035-----02568614886401--10110254556857
Q gi|254780153|r 116 DVREFTAPYGSLPDFSKVD---FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICDAT--SAVFARHIDFNKLD 185 (391)
Q Consensus 116 ~~~~~~~~~g~~~~~~~~~---~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD~v--Ss~g~~p~d~~~iD 185 (391)
.+..++=. |..... ..++..+|..||-+==+..+..+ +++..|.+++||=| |=+.-.|+. =+.|
T Consensus 117 ~v~fVDQ~-----D~~al~~ALa~kdPKLVlIEtPSNPLlRVVDI~~lc~La~~~G~~vvVDNTFLsP~lQ~PL~-LGAD 190 (383)
T TIGR02080 117 KVQFVDQS-----DEQALEAALAQKDPKLVLIETPSNPLLRVVDIAKLCKLAKAVGAVVVVDNTFLSPILQQPLS-LGAD 190 (383)
T ss_pred EEEEEECC-----HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCC-HHCC
T ss_conf 89986076-----28999999974698479986799885218889999988761883899855216776727530-1111
Q ss_pred EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999700120017665--154456778887654114457783123200112321033478644666448899999999862
Q gi|254780153|r 186 VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWL 263 (391)
Q Consensus 186 v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i 263 (391)
.++=|.-|=|-|-+= .|.||.++.- ......+|.|.. |. |-.-|-=|.+ |+=|
T Consensus 191 ~V~HS~TKYlNGHSDVi~GaVIaKd~q------------------~~e~L~WW~N~l-G~---tG~aFDSY~t---LRGl 245 (383)
T TIGR02080 191 LVIHSTTKYLNGHSDVIAGAVIAKDPQ------------------LAEELAWWANAL-GV---TGGAFDSYLT---LRGL 245 (383)
T ss_pred EEHHHHHCCCCCCHHHHHHHHHCCCHH------------------HHHHHHHHHHCC-CC---CCCHHHHHHH---HHHH
T ss_conf 301111100034034312124014712------------------234433343002-55---4443468899---8678
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-------------CC-CCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 010318999999997799999998747971676688200-------------36-5317898247310113734567888
Q gi|254780153|r 264 KKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT-------------RS-NTSICMKIVDSDIASLDINSQKSFC 329 (391)
Q Consensus 264 ~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~-------------rS-~~~v~~~~~d~~~~~~~~~~~~~~~ 329 (391)
+ .|..|...++++++.+-+++++.+..+... .|.- ++ -....|.++... ..-.+|.
T Consensus 246 R---TL~~Rm~~~qrnA~~Iv~yL~~~P~V~k~Y-yPgLpdH~GH~IA~~QQ~GFGAmlSFEL~G~~------~~v~~FL 315 (383)
T TIGR02080 246 R---TLAARMRSQQRNAQTIVEYLQTQPLVKKVY-YPGLPDHPGHEIAARQQKGFGAMLSFELKGGE------EAVRRFL 315 (383)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCHHHHHHHCCCCCCEEEEEECCCH------HHHHHHH
T ss_conf 8---888888888788999999984489402633-58788866769998625654330233321886------8999998
Q ss_pred HHHHHHHHHCCEEECCCC------------CCC--------CC--CE-EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999998886282872665------------567--------67--50-568615888999999999999999999
Q gi|254780153|r 330 KSMLSFLEKEEIAYDIGS------------YRD--------AP--LG-LRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 330 ~~~~~~l~~~g~~~~~~~------------~r~--------~~--~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
+.+.-+- .+=.+|| |+. +| .. +|+|+| .||.+-|++=||.+|..
T Consensus 316 ~~L~LFt----LAESLGGVESLiaHPATMTH~aM~~eAR~~AGI~~~LLRlSvG----lED~~DLiaDL~~gl~a 382 (383)
T TIGR02080 316 GKLSLFT----LAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVG----LEDADDLIADLDQGLQA 382 (383)
T ss_pred HHCCCHH----HHHHHCCHHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCEEEEE----ECCHHHHHHHHHHHHHC
T ss_conf 4314012----1233155123333010126021018989745841142000210----03468899999999741
No 327
>pfam06838 Alum_res Aluminium resistance protein. This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria.
Probab=92.50 E-value=0.81 Score=24.60 Aligned_cols=260 Identities=15% Similarity=0.081 Sum_probs=136.1
Q ss_pred HHHHHHHHHCCCCCCCC--------HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 99998632103653289--------8899999999999999968899857999748734899987532057897079970
Q gi|254780153|r 27 WSLGILEGALLGRSHRC--------VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAW 98 (391)
Q Consensus 27 ~v~~~~~~~~l~~sHRs--------~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~ 98 (391)
.||++++..-++-+|-. ..=.+.++++- .++|++.+. -|-.---|||-+...+++.+++|||.++.++
T Consensus 29 KVL~Af~~~~vs~~hf~~sTGYGy~D~GRd~Le~vy---A~vfgaE~A-LVR~q~vSGTHAi~~aLfg~LrPGD~ll~it 104 (405)
T pfam06838 29 KVLNAFQEHRVSDSHFTGSTGYGYDDIGRDTLERVY---ARVFGAEAA-LVRPQFVSGTHAIATALFGVLRPGDELLYIT 104 (405)
T ss_pred HHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHH---HHHHCCHHH-HCCCCCCCHHHHHHHHHHHCCCCCCEEEECC
T ss_conf 999999980977766688887787764689999999---999673776-5034325528999999983678998787448
Q ss_pred CCHHHHHHHHHHHCCC---------CCEEEEECCCCCCCCHHHCCC--CCCEEEEEEECCCCEEECC----E---EEE--
Q ss_conf 7368888876532387---------630674057776578676785--5657997420242022032----0---350--
Q gi|254780153|r 99 ESFGLGWMSDIRQLSL---------QDVREFTAPYGSLPDFSKVDF--DRDVVFVWNGTTSGVCVPD----V---GFI-- 158 (391)
Q Consensus 99 g~~~~r~~~~~~~~~~---------~~~~~~~~~~g~~~~~~~~~~--~~~v~~~h~ETstGv~~~~----~---~~~-- 158 (391)
|.=..-.-+.+-..+. .....+.-...-.+|.+.+.. ....-+++.--|.|-.... . +.+
T Consensus 105 G~PYDTL~eVIGi~g~~~GSL~e~Gv~Y~~v~L~~~g~~D~~~i~~ai~~~tk~v~IQRS~GYs~R~slsi~~I~~~i~~ 184 (405)
T pfam06838 105 GKPYDTLEEVIGIRGEGQGSLKDFGIGYREVPLLENGKVDWQAVKTAITPNTKLIGIQRSKGYAWRPSLTIAEIKEMIKF 184 (405)
T ss_pred CCCCHHHHHHHCCCCCCCCCHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99736589871858899888899596603643577898499999976175645999962568666888799999999999
Q ss_pred --CCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCC--CCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHH
Q ss_conf --256861488640110110254556--857999700120017--66515445677888765411445778312320011
Q gi|254780153|r 159 --PESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGG--EAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKG 232 (391)
Q Consensus 159 --~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~--ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~ 232 (391)
....++++.||-.=.=..+..... +.|++..|-=||.|| .|.=+.++-++++.|++...-....+-
T Consensus 185 vk~~~pd~ivfVDNCYGEFvE~~EP~~vGADliaGSLIKNpGGgiaptGGYIaGk~dlVe~aa~RLTaPGiG-------- 256 (405)
T pfam06838 185 VKEINPNVIVFVDNCYGEFVETKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKEELVEQASYRLTAPGIG-------- 256 (405)
T ss_pred HHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHEECCCEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCC--------
T ss_conf 997689939999788602026758530163440120124799773675777853699999987520688346--------
Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 23210334786446664488999999998620103189999999977999999987479716766882003653178982
Q gi|254780153|r 233 GRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI 312 (391)
Q Consensus 233 ~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~ 312 (391)
.+-|.++++ ...+-+.| +.+ .++....-+-+-..-..++++ ++...+.-.+.|+-.+.++.+
T Consensus 257 ------~e~Gat~~~-----~r~~~QGl--FlA----P~vv~eAlKga~~~A~~~e~l-G~~v~P~~~~~R~DiIQav~l 318 (405)
T pfam06838 257 ------REGGATLGS-----LREMYQGL--FLA----PHVVGEALKGAHFTARVLELL-GFPVLPKYNEKRTDLIQAVKF 318 (405)
T ss_pred ------CCCCCCCCH-----HHHHHHHH--CCC----HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCEEEEEEC
T ss_conf ------545768137-----89998786--002----499999999999999999984-994689999987745788867
Q ss_pred CCCC
Q ss_conf 4731
Q gi|254780153|r 313 VDSD 316 (391)
Q Consensus 313 ~d~~ 316 (391)
.+++
T Consensus 319 ~~~e 322 (405)
T pfam06838 319 GDKE 322 (405)
T ss_pred CCHH
T ss_conf 9989
No 328
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=92.06 E-value=0.92 Score=24.26 Aligned_cols=258 Identities=17% Similarity=0.152 Sum_probs=135.4
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH-HHHHHHHHHHCCCCCEEEEE
Q ss_conf 98899999999999999968899857999748734899987532057897079970736-88888765323876306740
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF-GLGWMSDIRQLSLQDVREFT 121 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~-~~r~~~~~~~~~~~~~~~~~ 121 (391)
..-|.+ ++++.=++.|+-+ .+.++...-. |.+.-|+++.|..++..++-+--.- +.-.....++.-+
T Consensus 52 paif~e---k~~~~g~~HlgG~-~e~~v~~NRT-SsailAtIlaL~~~~~~Vvh~vPe~paHPSI~rsc~lag------- 119 (346)
T TIGR03576 52 PAIFEE---KVQELGREHLGGP-EEKILVFNRT-SSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAG------- 119 (346)
T ss_pred CHHHHH---HHHHHHHHHCCCC-CCEEEEECCC-HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECC-------
T ss_conf 087699---9999999873998-3257774562-699999999835788705897878789997302005148-------
Q ss_pred CCCCCCCCHHHCCCCC--CEEEEEEECCCCEEECCEE---E--ECCCCCCEEEEEECCHHHH-----CCCC-CCCCEEEE
Q ss_conf 5777657867678556--5799742024202203203---5--0256861488640110110-----2545-56857999
Q gi|254780153|r 122 APYGSLPDFSKVDFDR--DVVFVWNGTTSGVCVPDVG---F--IPESREGLVICDATSAVFA-----RHID-FNKLDVVT 188 (391)
Q Consensus 122 ~~~g~~~~~~~~~~~~--~v~~~h~ETstGv~~~~~~---~--~~~~~~~llivD~vSs~g~-----~p~d-~~~iDv~~ 188 (391)
.++-+..+++++.... .+.++.-.|.+.-..+... + .++++++++++|=.|..-- .|-. .-+.|.++
T Consensus 120 aey~E~d~~~el~~~d~~slvviTgstmd~~vi~~d~~k~vI~~Ak~~~a~V~vDDAsGARvR~L~gq~~al~lGADLvV 199 (346)
T TIGR03576 120 AEYFESDELSELKKIDGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVV 199 (346)
T ss_pred CCEEECCCHHHHCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCEEE
T ss_conf 71475066776276788718999378777300457889999999874698499854888751665199986555642688
Q ss_pred ECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 70012001766515445677888765411445778312320011232103347864466644889999999986201031
Q gi|254780153|r 189 FSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG 268 (391)
Q Consensus 189 a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG 268 (391)
+|.-|-|.|| =.|+++.+++.+++.... ..++ |..-. || .+.++-.+|+.+.-+ -
T Consensus 200 TS~DKlM~GP-R~GlLaG~~eLV~ki~~~--------------~~~~------GlEaq-~P--i~aAmv~aLe~f~~~-~ 254 (346)
T TIGR03576 200 TSTDKLMDGP-RGGLLAGRKELVDKIKSV--------------GEQF------GLEAQ-AP--LLAAVVRALEEFELS-R 254 (346)
T ss_pred EEHHHCCCCC-CCCEECCCHHHHHHHHHH--------------HHHC------CCCCC-CC--HHHHHHHHHHCCCHH-H
T ss_conf 4002126677-541122888999999999--------------8752------77778-41--599999999707999-9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE-CCCC
Q ss_conf 899999999779999999874797167668820036531789824731011373456788899999888628287-2665
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAY-DIGS 347 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~ 347 (391)
+...++|.++ +|...- ..+. -.+.++-..+ .... ..+.+.-...+|.+.|++- -..|
T Consensus 255 l~~a~~r~~~----~~l~~~--~~l~------~e~TptGf~i--k~~~--------~e~~~~~~~~LL~~ygIiTIta~G 312 (346)
T TIGR03576 255 IRDAFKRKEE----VYLRLF--DKLN------VERTPTGFVI--KGVE--------EEKLIEIGLDLLRNYGIITITAVG 312 (346)
T ss_pred HHHHHHHHHH----HHHHHH--HCCC------CCCCCCEEEE--ECCC--------HHHHHHHHHHHHHHCCEEEEECCC
T ss_conf 9999999999----887653--0357------4327853798--5656--------888899999999976948983477
Q ss_pred CCCCCCEEEEEC
Q ss_conf 567675056861
Q gi|254780153|r 348 YRDAPLGLRVWV 359 (391)
Q Consensus 348 ~r~~~~~~RIg~ 359 (391)
+..+-+++|+-.
T Consensus 313 mpgasktlR~d~ 324 (346)
T TIGR03576 313 MPGASKTLRFDL 324 (346)
T ss_pred CCCCCCEEEEEE
T ss_conf 888763268762
No 329
>KOG1383 consensus
Probab=90.65 E-value=1.3 Score=23.36 Aligned_cols=303 Identities=13% Similarity=0.049 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH---HCCCC--C-CEEEEEECCHHHHHHHHHHHCCCCCE
Q ss_conf 889999999999999996889985799974873489998753---20578--9-70799707368888876532387630
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW---SLLGY--R-GVDVLAWESFGLGWMSDIRQLSLQDV 117 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~---nl~~~--~-~~~~~~~g~~~~r~~~~~~~~~~~~~ 117 (391)
|--.++-+++.+.+..+|+.|++ .+=-.+-|||.+..++.. |.... + +.--++.+.-.+-..+.++++-....
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~i~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383 116 PVVRKLEAECVNMIANLFNAPSD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEE
T ss_conf 33589999999999998469964-56755446516888898999999974059887100215889999999876679999
Q ss_pred EEEECCCC-CCCCHHHCCC--CCCEEE--E-EEECCCCEEECCEEE--EC-CCCCCEEEEEECCHHHHCC--------CC
Q ss_conf 67405777-6578676785--565799--7-420242022032035--02-5686148864011011025--------45
Q gi|254780153|r 118 REFTAPYG-SLPDFSKVDF--DRDVVF--V-WNGTTSGVCVPDVGF--IP-ESREGLVICDATSAVFARH--------ID 180 (391)
Q Consensus 118 ~~~~~~~g-~~~~~~~~~~--~~~v~~--~-h~ETstGv~~~~~~~--~~-~~~~~llivD~vSs~g~~p--------~d 180 (391)
..+....+ ...|+..... +....+ . --.|-+|..-++... +. ...+.++=||+.+.=.-.| +|
T Consensus 195 ~~V~~~~~~~~~D~~k~~~~i~eNti~lV~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fd 274 (491)
T KOG1383 195 REVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFD 274 (491)
T ss_pred EEEECCCCCEEECHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 76503632257629999987534637999975888767301599999999987277504201676621013245754566
Q ss_pred CCCCEE--EEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC------CHHH
Q ss_conf 568579--99700120017665154456778887654114457783123200112321033478644666------4488
Q gi|254780153|r 181 FNKLDV--VTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP------SLLC 252 (391)
Q Consensus 181 ~~~iDv--~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP------~v~~ 252 (391)
+..-.+ +-+..+|==-.|+|++.|+-+.+-+. ...++ .-.+|. |..+.|| |-+.
T Consensus 275 Fr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~l------~~q~~-~~~~w~-----------Gg~y~s~TlngSR~g~~ 336 (491)
T KOG1383 275 FRVPGVTSISADGHKYGLAPAGSSWVLYRNKELL------PHQLF-FHTDWL-----------GGIYASPTLNGSRPGSQ 336 (491)
T ss_pred CCCCCEEEEEECCCEEEEECCCCEEEEECCCCCC------CCEEE-EECCCC-----------CCCCCCCCCCCCCCCCH
T ss_conf 6888811487235300013078579998566666------54389-842546-----------76556752125785128
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999862010318999999997799999998747971676688200365317898247310113734567888999
Q gi|254780153|r 253 IEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSM 332 (391)
Q Consensus 253 i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 332 (391)
+.+.-.+|-.+= +.|-.+..+++.+.++.+++++++.+.+..+- .-.++|..-+....+ +..+
T Consensus 337 va~~wa~~~~lG-~eGY~~~~~~ive~~~~l~egie~i~~i~i~g-------kp~vs~~~~~s~~~~---------i~el 399 (491)
T KOG1383 337 VAAQWAALMSLG-EEGYRENTQNIVETARKLREGIENIKGIKIVG-------KPLVSFILFGSNDVN---------IFEL 399 (491)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC-------CCCEEEEECCCCCCC---------CEEH
T ss_conf 999999999861-78899999999999999998654355613327-------873799971687653---------1114
Q ss_pred HHHHHHCCEEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99888628287266556767505686-158889999999999999999999998
Q gi|254780153|r 333 LSFLEKEEIAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 333 ~~~l~~~g~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
...+.+.|..+ +.|+ .+.++-|- +...+.++=.++|+.-|+-+..+.|..
T Consensus 400 sd~l~~~GW~l--nalq-~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383 400 SDLLRKKGWIL--NALQ-FPAAIHICVTRVHAREDVADRFVADIRKVVEELKSL 450 (491)
T ss_pred HHHHHHCCCCC--CCCC-CCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 57898638676--6567-887216898864135888999999999999999848
No 330
>KOG1411 consensus
Probab=90.12 E-value=1.4 Score=23.07 Aligned_cols=260 Identities=13% Similarity=0.145 Sum_probs=137.6
Q ss_pred EECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHH----HCCCC--CCEEEE
Q ss_conf 974873489998753205789707997073688888765323876306740--5777657867----67855--657997
Q gi|254780153|r 71 IVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFS----KVDFD--RDVVFV 142 (391)
Q Consensus 71 ~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~----~~~~~--~~v~~~ 142 (391)
-++|.|....-|...-..-++..+++-.-.||+. ..+-+..+..+..+. .+.....+.+ ++... ....++
T Consensus 126 ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh--~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilL 203 (427)
T KOG1411 126 TLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNH--KNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILL 203 (427)
T ss_pred ECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCC--CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEE
T ss_conf 4057532667789998626666156158753456--76300258612566630541001356778998741788848985
Q ss_pred E--EECCCCEEECCE--EEE---CCCCCCEEEEEEC-CHHHHCCCCC----------CCCEEEEE-CCHHCCCCC----C
Q ss_conf 4--202420220320--350---2568614886401-1011025455----------68579997-001200176----6
Q gi|254780153|r 143 W--NGTTSGVCVPDV--GFI---PESREGLVICDAT-SAVFARHIDF----------NKLDVVTF-SAQKVLGGE----A 199 (391)
Q Consensus 143 h--~ETstGv~~~~~--~~~---~~~~~~llivD~v-Ss~g~~p~d~----------~~iDv~~a-~sQK~l~~p----p 199 (391)
| .+.-|||.-..+ +.+ -..++.+-++|+. ++|.+-.+|. ++.+++++ |--||||+- .
T Consensus 204 haCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvG 283 (427)
T KOG1411 204 HACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVG 283 (427)
T ss_pred EHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHCCC
T ss_conf 22103887889608889999987654035614665540423587024578999998707756765556552320332035
Q ss_pred CCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHCCCCHHHH
Q ss_conf 5154456778887654114457783123200112321033478644666448899999999-------862010318999
Q gi|254780153|r 200 GFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-------LWLKKMGGLSAC 272 (391)
Q Consensus 200 Gl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-------~~i~~~gGl~~~ 272 (391)
-+++|+-+.+.-.|.+.- +... -.-++.+||+++-......| .|.. -++.|
T Consensus 284 a~svvc~~ad~A~rV~SQ---------lk~l----------iRpmYSnPP~hGArIv~~Il~d~~l~~~W~~---evk~M 341 (427)
T KOG1411 284 ALSVVCKDADEAKRVESQ---------LKIL----------IRPMYSNPPLHGARIVATILSDPDLKNQWLG---EVKGM 341 (427)
T ss_pred EEEEEECCHHHHHHHHHH---------HHHH----------HCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH---HHHHH
T ss_conf 057872678888878877---------8888----------6011358986511455540477677778888---89998
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf 9999977999999987479716766882003653--17898247310113734567888999998886282872665567
Q gi|254780153|r 273 VERCNANAAVLFQFIQENDWIENLAVDETTRSNT--SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD 350 (391)
Q Consensus 273 ~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~--~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~ 350 (391)
..|.....+.+++.+++.+.-. +-.+-... -.||..-.| +-+..+.+|--++-++
T Consensus 342 adRi~~mR~~L~d~L~~~gs~~----~W~hI~~QIGMF~fTgl~p---------------eQv~~l~ke~~iYmT~---- 398 (427)
T KOG1411 342 ADRIISMRQQLFDALEKEGSPG----NWSHITKQIGMFCFTGLNP---------------EQVDWLTKEYHIYLTK---- 398 (427)
T ss_pred HHHHHHHHHHHHHHHHCCCCCC----CHHHHHHHHHEEEECCCCH---------------HHHHHHHHHHEEEECC----
T ss_conf 7766556888767763579876----6799997620033247899---------------9999987652366525----
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 6750568615888999999999999999999
Q gi|254780153|r 351 APLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391)
Q Consensus 351 ~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391)
--|||+-| ++..+|..|.++|..+.+.
T Consensus 399 ---dGRiS~aG-~ss~nV~yLa~aih~vtk~ 425 (427)
T KOG1411 399 ---DGRISMAG-LSSSNVPYLADAIHAVTKN 425 (427)
T ss_pred ---CCEEEECC-CCCCCCCCCCHHHHHHHCC
T ss_conf ---86376234-5656775411106767437
No 331
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=90.01 E-value=1.4 Score=23.02 Aligned_cols=165 Identities=18% Similarity=0.168 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH-HHHHHCCCCC-CEEEEEECCHHHHHH-HHHHHCCCCCEEE
Q ss_conf 988999999999999999688998579997487348999-8753205789-707997073688888-7653238763067
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVE-MALWSLLGYR-GVDVLAWESFGLGWM-SDIRQLSLQDVRE 119 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~e-a~~~nl~~~~-~~~~~~~g~~~~r~~-~~~~~~~~~~~~~ 119 (391)
|.-..++.+.....+-++++++.--.+++++ =+||.=- .++..+-... +.-+++|-.--++-. +-+...+ ....+
T Consensus 100 SSll~kLTn~l~ld~lr~~G~~s~~~~~vvP-~ATGMsL~LcL~alr~~rp~a~yViw~RiDQKSc~K~i~~AG-l~piv 177 (444)
T TIGR03531 100 SSLLYKLTNKLVKDFLKLLGLRSVKSAIVVP-LATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAG-LEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-CCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHCC-CEEEE
T ss_conf 2899999999999999983985326579962-534518999999985018899889985355532688998659-72799
Q ss_pred EE-CCCC--CCCCHHHCCC------CCCEEEEEEECCCCE-EEC----CEEEECCCCCCEEEEEEC---CH-HHHCCCC-
Q ss_conf 40-5777--6578676785------565799742024202-203----203502568614886401---10-1102545-
Q gi|254780153|r 120 FT-APYG--SLPDFSKVDF------DRDVVFVWNGTTSGV-CVP----DVGFIPESREGLVICDAT---SA-VFARHID- 180 (391)
Q Consensus 120 ~~-~~~g--~~~~~~~~~~------~~~v~~~h~ETstGv-~~~----~~~~~~~~~~~llivD~v---Ss-~g~~p~d- 180 (391)
++ ...| -..++++++. ++.+..++..||.=. ..| ..+.+|..++++-||--. ++ .....++
T Consensus 178 ie~~l~gd~l~tdv~~ie~~i~~~g~~~i~cVlSTTScFAPR~~D~i~eiAklC~~~~IpHvVNNAYGlQ~~~~~~~i~~ 257 (444)
T TIGR03531 178 IETVLDGDRLTTDVEDIERAIEEIGPENILCVLSTTSCFAPRSPDDIEEIAKICAKYDIPHVVNNAYGLQSNKYMEKINK 257 (444)
T ss_pred EEEEECCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH
T ss_conf 74075188774699999999998286764799853654599997669999999997499837842036617999999999
Q ss_pred ---CCCCEEEEECCHHCCCCCCCCEEEEECHH
Q ss_conf ---56857999700120017665154456778
Q gi|254780153|r 181 ---FNKLDVVTFSAQKVLGGEAGFGIIILSPA 209 (391)
Q Consensus 181 ---~~~iDv~~a~sQK~l~~ppGl~~v~~s~~ 209 (391)
...+|+++-|+-|||+.|=|=++|+-+++
T Consensus 258 A~r~GRVDa~VQStDKNflVPVGGaII~s~d~ 289 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE 289 (444)
T ss_pred HHHCCCCEEEEEECCCCEEEECCCEEEEECCH
T ss_conf 98649831999706866254348748971888
No 332
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=89.08 E-value=1.7 Score=22.58 Aligned_cols=292 Identities=16% Similarity=0.062 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHCC--CCCCEEEEECCCCHHHHHHHHHHCCCCCC-----EEEEEECCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 999999999999688--99857999748734899987532057897-----07997073688888765323876306740
Q gi|254780153|r 49 RINKAIQLTRKVLEV--PENYRIAIVPASDTGAVEMALWSLLGYRG-----VDVLAWESFGLGWMSDIRQLSLQDVREFT 121 (391)
Q Consensus 49 i~~~~~~~l~~l~~~--p~~y~v~~l~GsgT~~~ea~~~nl~~~~~-----~~~~~~g~~~~r~~~~~~~~~~~~~~~~~ 121 (391)
-+++...+|+++-|- .+++.++|.+|| |.-+.|++..|-.++. .-++..--|..- ......+-. .. ..
T Consensus 47 eLe~~Ir~LH~~VGNAvtdgr~iv~GtGs-TQL~~Aav~ALs~~~~~~~~p~~VVa~aPyYs~-y~~qT~~~~--s~-~y 121 (363)
T pfam04864 47 ELEREIRRLHRAVGNAVTDDRYIVFGTGS-TQLLQAAVYALSPNVTPTSPPVKVVAAVPYYSV-YKEQTSYFD--SK-GY 121 (363)
T ss_pred HHHHHHHHHHHHHCCCEECCEEEEEECCH-HHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC-CHHHHHHHC--CC-CC
T ss_conf 99999999998633421066169991788-999999998638899987887323556876644-287888845--67-84
Q ss_pred CCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEE---ECCCCCCEEEEEECCHHHHC-CCC-CCCCEEEEECCHHCCC
Q ss_conf 577765786767855657997420242022032035---02568614886401101102-545-5685799970012001
Q gi|254780153|r 122 APYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGF---IPESREGLVICDATSAVFAR-HID-FNKLDVVTFSAQKVLG 196 (391)
Q Consensus 122 ~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~---~~~~~~~llivD~vSs~g~~-p~d-~~~iDv~~a~sQK~l~ 196 (391)
.+.| +...+... +-.-...|-.|.=.||.-.+ +........|-|-.=--... ||. ...-|++.+.--|+-
T Consensus 122 ~w~G---da~~~~~~-~~~~~~IElVtSPNNPdG~lr~aV~~g~~~k~i~D~aYYWPhyTpIt~~aD~DIMLFTlSK~T- 196 (363)
T pfam04864 122 EWKG---NASAYVNT-DNPGPFIELVTSPNNPDGTLREAVIDGSEAKVIHDLAYYWPHYTPITYPADEDIMLFTMSKYT- 196 (363)
T ss_pred EECC---CHHHHCCC-CCCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC-
T ss_conf 4634---68983679-998872899838999840133665069984188752000666667677776767989861223-
Q ss_pred CCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHH---HHHHHHHHHCCCCHHH
Q ss_conf 7665--1544567788876541144577831232001123210334786446664488999---9999986201031899
Q gi|254780153|r 197 GEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIED---YIDALLWLKKMGGLSA 271 (391)
Q Consensus 197 ~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~a---l~~~l~~i~~~gGl~~ 271 (391)
|-+| +|.++++++.+.+. +..+.+ -+|..+.-...+++ |..+++.++.+.|-..
T Consensus 197 GHAGsRiGWALVKD~~Vakk--------------M~~y~~-------lNt~GvS~dSQlRa~kiLkvv~~~~~~~~~~~~ 255 (363)
T pfam04864 197 GHAGSRFGWALVKDEEVAKK--------------MVEYIE-------LNTIGVSKESQLRTLKILKVVLATCKTESGTMG 255 (363)
T ss_pred CCCCCCEEEEEECCHHHHHH--------------HHHHHH-------HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 67625234788637999999--------------999976-------505306889999999999999976326766235
Q ss_pred H----HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC
Q ss_conf 9----999997799999998747971676688200365317898247310113734567888999998886282872665
Q gi|254780153|r 272 C----VERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS 347 (391)
Q Consensus 272 ~----~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 347 (391)
+ ...-+++=+.|++.++.++-|++....+.+..-....+ -+.|...=+.-+.+ .+++....|.+.+++..-|.
T Consensus 256 iF~fg~~~m~~RW~~L~~~v~~S~~FsL~~~~p~yC~ff~~~~-~~sPafaWlkCe~e--ed~DC~~~L~~~~I~~r~G~ 332 (363)
T pfam04864 256 FFDFGYQTMRERWERLRELVSSSTRFSLQKLPPEYCNYFKKIR-EPSPAYAWLKCEWE--EDTDCYEVLREGKILTRSGE 332 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCC-CCCCCEEEEEECCC--CHHHHHHHHHHCCEECCCCC
T ss_conf 7899999999999999999711580772677877665423216-89986379972663--20179999987886456876
Q ss_pred CCCCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 567675-05686158889999999999999
Q gi|254780153|r 348 YRDAPL-GLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 348 ~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
+=.++. ..|+|+.- ..+|.+.|++-|+
T Consensus 333 ~Fga~~~YVRlSll~--~~d~Fd~lleRL~ 360 (363)
T pfam04864 333 RFGADSRYVRLSLIK--TQDDFDQLLQRLK 360 (363)
T ss_pred CCCCCCCEEEEEEEC--CHHHHHHHHHHHH
T ss_conf 458898769998406--8878999999998
No 333
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase; InterPro: IPR010107 This entry represents Glutamate decarboxylase (gad;) it is a pyridoxal 5'-phosphate (PLP)-dependent enzyme, which catalyses the irreversible alpha-decarboxylation of L-glutamate to gamma-aminobutyrate (GABA). This enzyme is widely distributed amongst eukaryotes and prokaryotes, but its function varies in different organisms . Gad has a crucial role in the vertebrate central nervous system where it is responsible for the synthesis of GABA, the major inhibitory neurotransmitter. In the majority of vertebrates Gad occurs in two isoforms, GAD65 and GAD67, both active at neutral pH . Gad isoforms (GadA and GadB) have also been reported in some bacterial species, including the Gram-negative bacterium and Gram-positive bacterium . A unique feature of plant and yeast Gad is the presence of a calmodulin (CaM)-binding domain in the C-terminal region. In Saccharomyces cerevisiae, Gad expression is required for normal oxidative stress tolerance . In plants, Gad is thought to be a stress-adapter chaperonin sensing Ca2+ signals.; GO: 0004351 glutamate decarboxylase activity, 0030170 pyridoxal phosphate binding, 0006536 glutamate metabolic process.
Probab=83.11 E-value=3.4 Score=20.63 Aligned_cols=316 Identities=17% Similarity=0.076 Sum_probs=185.9
Q ss_pred HHHH-HHHHHHHHHHHHHHCCC--CCCEE-EEECCCCHHHHHHHHHHCC--------------CCCC--EEEEEECCHHH
Q ss_conf 8899-99999999999996889--98579-9974873489998753205--------------7897--07997073688
Q gi|254780153|r 44 VLGK-ERINKAIQLTRKVLEVP--ENYRI-AIVPASDTGAVEMALWSLL--------------GYRG--VDVLAWESFGL 103 (391)
Q Consensus 44 ~~f~-~i~~~~~~~l~~l~~~p--~~y~v-~~l~GsgT~~~ea~~~nl~--------------~~~~--~~~~~~g~~~~ 103 (391)
|.-- +|-.+|.+.|.+||++| .|.+. =++-.|-+|.=|||++..+ ++.+ +==+|.|.=-|
T Consensus 84 PqTar~i~~RCVnM~a~LfhAp~~~D~~~~savGtsTiGSSEAiMLGGlAmK~rWr~R~~~~Gk~~d~kKPNlv~g~~vQ 163 (493)
T TIGR01788 84 PQTAREIENRCVNMLADLFHAPALKDEEAASAVGTSTIGSSEAIMLGGLAMKWRWRKRMKAAGKPADAKKPNLVMGSNVQ 163 (493)
T ss_pred CHHHHHHHHCCEEHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCE
T ss_conf 54489885043012344114787778775664351773258999987777579999999863888787887236079861
Q ss_pred HHHHHHHHCCCCCEEEEECCC-C-CCCCHHH----CCCCCC-EEEEEEECCCCEEECCE------EEE--CC----CCCC
Q ss_conf 888765323876306740577-7-6578676----785565-79974202420220320------350--25----6861
Q gi|254780153|r 104 GWMSDIRQLSLQDVREFTAPY-G-SLPDFSK----VDFDRD-VVFVWNGTTSGVCVPDV------GFI--PE----SREG 164 (391)
Q Consensus 104 r~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~----~~~~~~-v~~~h~ETstGv~~~~~------~~~--~~----~~~~ 164 (391)
=..+.++++--++...+--.. + ...++++ +|+.+- |+.+-.-|=||-.=|+. ..+ .+ .-++
T Consensus 164 VCWEKF~RYfdVE~R~VP~~~r~r~~i~Pe~~~~~vDENTIGV~~ILG~TyTG~yE~v~~lnD~L~~~~~~~PDWsg~d~ 243 (493)
T TIGR01788 164 VCWEKFARYFDVELREVPMDKRDRYVIDPEEVVDLVDENTIGVVAILGTTYTGEYEDVKALNDLLEELNAKTPDWSGWDI 243 (493)
T ss_pred EEECCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 64212203355401367207777601188999986076752488874723258708889999999997427887477876
Q ss_pred EEEEEECCHHHHCCCC------------CCCCE---EE-E-ECCHHCCC-CCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf 4886401101102545------------56857---99-9-70012001-766515445677888765411445778312
Q gi|254780153|r 165 LVICDATSAVFARHID------------FNKLD---VV-T-FSAQKVLG-GEAGFGIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 165 llivD~vSs~g~~p~d------------~~~iD---v~-~-a~sQK~l~-~ppGl~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
++=|||-|.=.-.||- .|.+- |+ + +|.+| .| .+||+|.|+.+.+ + ..|.=
T Consensus 244 PiHvDAASGGFi~PFGfekehmk~~PDl~WDFRLprV~SINvSGHK-YGLvYPGvGWViWRd~------e-----~LPeE 311 (493)
T TIGR01788 244 PIHVDAASGGFIAPFGFEKEHMKVEPDLEWDFRLPRVKSINVSGHK-YGLVYPGVGWVIWRDE------E-----ALPEE 311 (493)
T ss_pred CEEEECCCCCCCCCCCCCCCCEEECCCEEECCCCCCEEEECCCCCC-CCCCCCCCCEEEECCC------C-----CCHHH
T ss_conf 6477446788113766353411545712656617824687046551-2464766126887581------1-----37013
Q ss_pred HHCCHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCCCC
Q ss_conf 320011232103347864466-6448899999999862010318999999997799999998747----97167668820
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINT-PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN----DWIENLAVDET 301 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~T-P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~----~~~~~~~~~~~ 301 (391)
|-+.-. .........+.=|. |+-+.|...-.-|+ +=.+ |-..+.+.+...|+.|.+.|+++ +-|+.+....+
T Consensus 312 LiF~vn-YLGg~~~tFtLNFSrp~~qViaQYYnFlR-LG~~-GYr~i~q~~~~vA~~La~~~~~~sklPG~Fe~~s~g~~ 388 (493)
T TIGR01788 312 LIFHVN-YLGGDEPTFTLNFSRPANQVIAQYYNFLR-LGRE-GYRKIMQNLLDVAQYLAEEIAKLSKLPGPFEILSDGRE 388 (493)
T ss_pred CEEECC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHH-CCHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 111011-02665654301355762311364466885-0401-34899998999999999999986069984588717875
Q ss_pred ---------------------CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC---CC-----
Q ss_conf ---------------------0365317898247310113734567888999998886282872665567---67-----
Q gi|254780153|r 302 ---------------------TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD---AP----- 352 (391)
Q Consensus 302 ---------------------~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~---~~----- 352 (391)
....=+|+|+++|....+ +..--..++...|...|-+|=. |+. +.
T Consensus 389 sienDsaPksvkDYWehPqaY~~~~P~VaFrLKd~~~~~----Y~~Yt~~~ls~~LR~rGWiVPA--YtlP~~~~GsDd~ 462 (493)
T TIGR01788 389 SIENDSAPKSVKDYWEHPQAYKSGIPLVAFRLKDDADEE----YTGYTLYDLSHKLRERGWIVPA--YTLPKNAEGSDDI 462 (493)
T ss_pred CCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCC----CCCCCHHHHHHHHHHCCCCCCC--CCCCCCCCCCCCE
T ss_conf 433456774012331364122789777988536877888----8767899999985034731347--8884335677872
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5056861588899999999999999999
Q gi|254780153|r 353 LGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 353 ~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
..+||=+=-..+.+=-+.|++=++-+.+
T Consensus 463 ~v~RiVvRe~~~~d~A~~Li~D~~~~~~ 490 (493)
T TIGR01788 463 EVLRIVVREDFSRDLAELLIEDLEKALA 490 (493)
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 7999987258984069999999999999
No 334
>KOG0634 consensus
Probab=71.31 E-value=7.5 Score=18.48 Aligned_cols=165 Identities=14% Similarity=0.144 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCC--CCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEE-EE
Q ss_conf 889999999999999996889--985799974873489998753205789707997073688888765323876306-74
Q gi|254780153|r 44 VLGKERINKAIQLTRKVLEVP--ENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVR-EF 120 (391)
Q Consensus 44 ~~f~~i~~~~~~~l~~l~~~p--~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~-~~ 120 (391)
.=.-+++..++...+..++.| .+|. +++++|.|-+++-+...++..++.+++.--.|..- .+-+...+ +.+. +.
T Consensus 100 ~G~peLl~fik~h~~~~ih~p~~~~wd-iiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~A-L~s~~a~g-v~~ipv~ 176 (472)
T KOG0634 100 SGIPELLLFIKDHNRPTIHAPPYKNWD-IIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSA-LQSMEALG-VKIIPVK 176 (472)
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCE-EEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHH-HHHCCCCC-CEEEECC
T ss_conf 684899999987462314277778843-89806872178999998516788268740343678-87331048-4577414
Q ss_pred ECCCCCCCC-H----HHCCCC------CCEEEE--EEECCCCEEECCEEE-----ECCCCCCEEEEEECCHHHHCC----
Q ss_conf 057776578-6----767855------657997--420242022032035-----025686148864011011025----
Q gi|254780153|r 121 TAPYGSLPD-F----SKVDFD------RDVVFV--WNGTTSGVCVPDVGF-----IPESREGLVICDATSAVFARH---- 178 (391)
Q Consensus 121 ~~~~g~~~~-~----~~~~~~------~~v~~~--h~ETstGv~~~~~~~-----~~~~~~~llivD~vSs~g~~p---- 178 (391)
-...|..++ + +.|+.. ..|.+| -.-.-||.....+.. ++.+++.|+|-|=.=.+.-++
T Consensus 177 md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~ 256 (472)
T KOG0634 177 MDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNP 256 (472)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCC
T ss_conf 56789887999989864885434689970799676888998874689999999999987678999247631243366688
Q ss_pred ------------------------CCCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHH
Q ss_conf ------------------------45568579997001200176651--544567788876
Q gi|254780153|r 179 ------------------------IDFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVER 213 (391)
Q Consensus 179 ------------------------~d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~ 213 (391)
+|.++-=+-..+.-|-++ ||+ |.+..++..++|
T Consensus 257 ~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia--PGlRlG~it~~~~~l~r 315 (472)
T KOG0634 257 SLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA--PGLRLGWITGNSLFLKR 315 (472)
T ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHC--CCCEEEEEECCHHHHHH
T ss_conf 766467552478898864477323666661786341244416--76315786357778888
No 335
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=70.61 E-value=7.7 Score=18.38 Aligned_cols=314 Identities=15% Similarity=0.029 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--HCC-CCC----CEEEEEECCHHHHHHHHHHHCCCCCEE
Q ss_conf 9999999999999996889985799974873489998753--205-789----707997073688888765323876306
Q gi|254780153|r 46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW--SLL-GYR----GVDVLAWESFGLGWMSDIRQLSLQDVR 118 (391)
Q Consensus 46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~--nl~-~~~----~~~~~~~g~~~~r~~~~~~~~~~~~~~ 118 (391)
..+++.+.++-|+++-+... -.+=-..|+.|-+...+. ..- ..| ++.++-....|-.-+ .+.+.+.+|.
T Consensus 107 ~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA--SAam~G~~VV 182 (496)
T COG1003 107 YLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA--SAAMAGFKVV 182 (496)
T ss_pred HHHHHHHHHHHHHHHCCCCE--EECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH--HHHHCCCEEE
T ss_conf 99999999999997409762--6406787764156789999999997588777679831655689865--6765485599
Q ss_pred EEECCCCCCCCHHHCCC----CCCEEEEEEECCCCEEECC-EEE--ECCCCCCEEEEEECCH---HH-HCCCCCCCCEEE
Q ss_conf 74057776578676785----5657997420242022032-035--0256861488640110---11-025455685799
Q gi|254780153|r 119 EFTAPYGSLPDFSKVDF----DRDVVFVWNGTTSGVCVPD-VGF--IPESREGLVICDATSA---VF-ARHIDFNKLDVV 187 (391)
Q Consensus 119 ~~~~~~g~~~~~~~~~~----~~~v~~~h~ETstGv~~~~-~~~--~~~~~~~llivD~vSs---~g-~~p~d~~~iDv~ 187 (391)
++.....-.+|++++.. .....++-|-++-|+--.. .++ +.|+.|.++-.|+.-- +| ++|=| .++||+
T Consensus 183 ~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd-~G~DV~ 261 (496)
T COG1003 183 VVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGD-MGFDVV 261 (496)
T ss_pred EEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCC-CCCCEE
T ss_conf 9832898871699999874131158886168645450451999999999729989844754352522556655-656357
Q ss_pred EECCHHCCCCC-----CCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH--CCCC----C-CCCCCCCCHHHHHH
Q ss_conf 97001200176-----65154456778887654114457783123200112321--0334----7-86446664488999
Q gi|254780153|r 188 TFSAQKVLGGE-----AGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM--EGLF----C-GETINTPSLLCIED 255 (391)
Q Consensus 188 ~a~sQK~l~~p-----pGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~-~~~~~TP~v~~i~a 255 (391)
=.--+|-|+.| ||.+.|.++..+..-+ +.|. .+....++. .... + ...+..-++..+.-
T Consensus 262 HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfL-------P~p~--~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~ 332 (496)
T COG1003 262 HLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFL-------PGPV--VYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAW 332 (496)
T ss_pred EEECCCCCCCCCCCCCCCCCCEEHHHHCCCCC-------CCCC--CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH
T ss_conf 75223110258888999877602585512338-------9873--34777530036787764226514557616899999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999862010318999999997799999998747971676688200365317898247310113734567888999998
Q gi|254780153|r 256 YIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSF 335 (391)
Q Consensus 256 l~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~ 335 (391)
. .+..+=.+ ||...-+..--+++.+-..++. .+. ..-.+.. -...-++.-..|. ...-+.-..++.++
T Consensus 333 ~--YI~~mG~~-GL~~ase~AvLNANYia~rL~~--~y~-~~y~~~~-~~~HE~ild~r~l-----~~~~Gv~~~DvAKr 400 (496)
T COG1003 333 A--YIRMMGAD-GLKQASEVAVLNANYIARRLKG--YYP-VPYTGEN-RVAHECILDARPL-----KKETGVRALDVAKR 400 (496)
T ss_pred H--HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH--CCC-CCCCCCC-CCEEEEEEECHHH-----HHHCCCCHHHHHHH
T ss_conf 9--99987577-8889899999847999997540--275-5547887-6115899605666-----76429838999999
Q ss_pred HHHCCEEECCCCCCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 886282872665567-67505686158889999999999999999999998
Q gi|254780153|r 336 LEKEEIAYDIGSYRD-APLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 336 l~~~g~~~~~~~~r~-~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
|...|..--+-.+.. +...+=|----.-+.+++|+.+++|.-.-.+.+..
T Consensus 401 LlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 401 LLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred HHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 872588887465753356504535777768899999999999999998746
No 336
>cd01013 isochorismatase Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems. Isochorismatase is part of the phenazine biosynthesis pathway. Phenazines are antimicrobial compounds that provide the competitive advantage for certain bacteria.
Probab=69.10 E-value=7.6 Score=18.45 Aligned_cols=122 Identities=10% Similarity=0.019 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHCC--CCCCEEEEEC--CCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCC-
Q ss_conf 9999999999688--9985799974--8734899987532057897079970736888887653238763067405777-
Q gi|254780153|r 51 NKAIQLTRKVLEV--PENYRIAIVP--ASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYG- 125 (391)
Q Consensus 51 ~~~~~~l~~l~~~--p~~y~v~~l~--GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g- 125 (391)
.++..++++|+.. ..+-.|++.. +.......+...++.+++ +..|.|+.....++.-..+ +..+.+.-+.
T Consensus 53 ~~vv~ni~rL~~aaR~~GipVi~t~~~~~~~~~~r~~~~~~~g~~----~~~g~~g~eiv~eL~P~~~-d~vi~K~~~sa 127 (203)
T cd01013 53 PQLIANIARLRDWCRQAGIPVVYTAQPGNQTPEQRALLNDFWGPG----LTASPEETKIVTELAPQPD-DTVLTKWRYSA 127 (203)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCCCCC-CEEEECCCCCC
T ss_conf 889999999999999879969998347879966730011023788----7689864533714389999-98985486788
Q ss_pred -CCCCHHHC---CCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEECCHHHHC
Q ss_conf -65786767---85565799742024202203203502568614886401101102
Q gi|254780153|r 126 -SLPDFSKV---DFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFAR 177 (391)
Q Consensus 126 -~~~~~~~~---~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~vSs~g~~ 177 (391)
...+++.+ ...+.+.++...|..+|...........+...++.||+++.-..
T Consensus 128 F~~T~L~~~Lr~~gi~~Lvv~Gv~T~~CV~~T~rdA~~~gy~v~vv~Da~a~~~~e 183 (203)
T cd01013 128 FKRSPLLERLKESGRDQLIITGVYAHIGCLSTAVDAFMRDIQPFVVADAIADFSLE 183 (203)
T ss_pred CCCCCHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCHH
T ss_conf 67999899999769998999865425139999999998799499931145789999
No 337
>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).
Probab=68.35 E-value=8.6 Score=18.08 Aligned_cols=271 Identities=16% Similarity=0.117 Sum_probs=137.4
Q ss_pred CCCHHHHHHHHHHC-CCCCC-EE-EEEECCHHHHHHHHH-HHCCCCCEEEEECCCCCCCCHHHCCCCCC--EEEEEEECC
Q ss_conf 87348999875320-57897-07-997073688888765-32387630674057776578676785565--799742024
Q gi|254780153|r 74 ASDTGAVEMALWSL-LGYRG-VD-VLAWESFGLGWMSDI-RQLSLQDVREFTAPYGSLPDFSKVDFDRD--VVFVWNGTT 147 (391)
Q Consensus 74 GsgT~~~ea~~~nl-~~~~~-~~-~~~~g~~~~r~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--v~~~h~ETs 147 (391)
=-||.|=||+++++ +++.+ +. ++|.-.-=..-..-+ .|..-...+++..+...+.+..++=...+ -++++-=-+
T Consensus 137 DEgTAAaEAMals~~vSk~Knan~ffva~d~HpQT~~V~~TRA~pfgiEvIv~D~~~~~~~~dvfknPdvsG~LlQypaT 216 (965)
T TIGR00461 137 DEGTAAAEAMALSFRVSKKKNANKFFVAKDVHPQTLEVVKTRAKPFGIEVIVDDASDVKKAVDVFKNPDVSGVLLQYPAT 216 (965)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 17889999999987642222110110210377343688752403145168863445556544332177744157623577
Q ss_pred CCEEECCEE---EE--CCCCCCEEEEEECCHHHHCCC----CCCCCEEEEECCHHCCCCCCCCE----------------
Q ss_conf 202203203---50--256861488640110110254----55685799970012001766515----------------
Q gi|254780153|r 148 SGVCVPDVG---FI--PESREGLVICDATSAVFARHI----DFNKLDVVTFSAQKVLGGEAGFG---------------- 202 (391)
Q Consensus 148 tGv~~~~~~---~~--~~~~~~llivD~vSs~g~~p~----d~~~iDv~~a~sQK~l~~ppGl~---------------- 202 (391)
+|-.+|... .+ .|.+.. +|=-.|++.++-+ -.-+.|+++.|+|. ||.|=|.|
T Consensus 217 dG~i~PPddy~~lid~lhshk~--lvsvAaD~maLtLL~pPg~~GADIv~GS~QR-FGvPmGYGGPHAAfFA~kdey~Rk 293 (965)
T TIGR00461 217 DGEIYPPDDYKALIDKLHSHKA--LVSVAADLMALTLLTPPGKLGADIVLGSSQR-FGVPMGYGGPHAAFFAVKDEYKRK 293 (965)
T ss_pred CCCCCCCHHHHHHHHHHHCCHH--HHHHHHHHHHHHHCCCCHHCCCCEEEECCCC-CCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 7723686228999998741301--2467878999985058213088678625432-565688872448999999984488
Q ss_pred ----EEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCHHHHHHHHH
Q ss_conf ----4456778887654114457783123200112321033478644666448899999999-86201031899999999
Q gi|254780153|r 203 ----IIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-LWLKKMGGLSACVERCN 277 (391)
Q Consensus 203 ----~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-~~i~~~gGl~~~~~r~~ 277 (391)
+|.+||++.-+. -|.++...+...=++..-|-|==-...+.|--.++ --+.--.||+++..|.-
T Consensus 294 ~PGRIvGvSKDa~G~t-----------ALRlAlQTREQHIrRdKAtSNICTaQvLLAn~AS~Y~VYHGp~GLknIa~RIh 362 (965)
T TIGR00461 294 MPGRIVGVSKDALGNT-----------ALRLALQTREQHIRRDKATSNICTAQVLLANVASLYAVYHGPKGLKNIARRIH 362 (965)
T ss_pred CCCEEEEEECCCCCCH-----------HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 9950676511345877-----------89988631222010024566236899999998875011026645789999988
Q ss_pred HHHHHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEE
Q ss_conf 7799999998747-971676688200365317898247310113734567888999998886282872665567675056
Q gi|254780153|r 278 ANAAVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLR 356 (391)
Q Consensus 278 ~~a~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~R 356 (391)
+....|-.+|++. -.+++. ++-+- =..++.+.+... -...+.+++...++= + -......+=
T Consensus 363 ~LT~iLA~gl~~~sC~~~L~--n~~~F--DTL~v~vg~~~~----------~~ql~lkaae~~~IN--L--r~~~~~~vg 424 (965)
T TIGR00461 363 RLTSILAAGLKRKSCNYELR--NKYYF--DTLTVKVGDKAS----------SEQLVLKAAEEAEIN--L--RAVVLTEVG 424 (965)
T ss_pred HHHHHHHHHHHHCCCCCCCC--CCCCC--CEEEEEECCCCC----------HHHHHHHHHHHCCCC--C--CCCCCCCEE
T ss_conf 89999999975306885114--35334--303663033466----------578999999755885--2--211325411
Q ss_pred EECCCCCCHHHHHHHHHHHH
Q ss_conf 86158889999999999999
Q gi|254780153|r 357 VWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 357 Ig~~g~i~~~dv~~L~~aLe 376 (391)
|++==+++.+||..|.+.++
T Consensus 425 i~LDETtT~~dv~~L~~Vf~ 444 (965)
T TIGR00461 425 IALDETTTKEDVLDLLKVFA 444 (965)
T ss_pred EEECCHHHHHHHHHHHHHHC
T ss_conf 22142343899999999850
No 338
>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939 This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.
Probab=67.90 E-value=6.1 Score=19.05 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=50.7
Q ss_pred CCCC--HHHHHHHHHHCCCCCC-EEEEEECC-HHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCC
Q ss_conf 4873--4899987532057897-07997073-688888765323876306740577765786767855657997420242
Q gi|254780153|r 73 PASD--TGAVEMALWSLLGYRG-VDVLAWES-FGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTS 148 (391)
Q Consensus 73 ~Gsg--T~~~ea~~~nl~~~~~-~~~~~~g~-~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETst 148 (391)
+|+| +-+|-+++.+. +.|. ++|+.+.+ +|..+.+.+++-...|.+.... .--|+=+|.=+=.
T Consensus 21 ~G~GKTn~c~~~a~~a~-~~Gk~v~YiDTEGGLS~ER~~q~~~~~~~D~e~~~~-------------~~iv~~~~~f~eQ 86 (223)
T TIGR02237 21 PGSGKTNICLILAVNAA-RQGKKVVYIDTEGGLSPERFKQIAEDRALDPERVLS-------------NVIVFEVFDFDEQ 86 (223)
T ss_pred CCCCHHHHHHHHHHHHH-HCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHC-------------CEEEECCCCHHHH
T ss_conf 99867899999999998-618958999628983289999986305889888841-------------5355235356789
Q ss_pred CEEECCEEEECCCC---CCEEEEEECCHHHHCCCC
Q ss_conf 02203203502568---614886401101102545
Q gi|254780153|r 149 GVCVPDVGFIPESR---EGLVICDATSAVFARHID 180 (391)
Q Consensus 149 Gv~~~~~~~~~~~~---~~llivD~vSs~g~~p~d 180 (391)
+........++... --|+|||+.|+|.-.+-.
T Consensus 87 ~~ai~~~~~~~~~~G~~~~LvVvDs~t~~YRle~~ 121 (223)
T TIGR02237 87 EVAIQKTSKLIDRDGDKADLVVVDSFTALYRLERS 121 (223)
T ss_pred HHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHCCC
T ss_conf 99999999998606883314888153345420257
No 339
>KOG0628 consensus
Probab=67.85 E-value=8.8 Score=18.02 Aligned_cols=317 Identities=12% Similarity=0.012 Sum_probs=158.6
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEE-------EEECCCCHHHHHHHHHH----C---CCCCC---------EEEEEE-
Q ss_conf 988999999999999999688998579-------99748734899987532----0---57897---------079970-
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPENYRI-------AIVPASDTGAVEMALWS----L---LGYRG---------VDVLAW- 98 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~~y~v-------~~l~GsgT~~~ea~~~n----l---~~~~~---------~~~~~~- 98 (391)
||-..++=--++.=|.+++++|+.+.- =.+|||++.+.-.+++- . ++.+. ..++++
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEE
T ss_conf 84067899999999999851809874367899960685475135899999999999998632897644055653424882
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC----CC------CCEEEEEEECCCCEEECC---EEEECCCCCCE
Q ss_conf 736888887653238763067405777657867678----55------657997420242022032---03502568614
Q gi|254780153|r 99 ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD----FD------RDVVFVWNGTTSGVCVPD---VGFIPESREGL 165 (391)
Q Consensus 99 g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~------~~v~~~h~ETstGv~~~~---~~~~~~~~~~l 165 (391)
..=++.-.+.++..++.....+..+.+.....+.+. .+ +.....-..|++--.++. ...+|.+++.-
T Consensus 188 SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glW 267 (511)
T KOG0628 188 SDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLW 267 (511)
T ss_pred CCCCCCHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHCCHHHHCCEE
T ss_conf 47641268876744002688851366767787999999999986798657999840576555554187741035226878
Q ss_pred EEEEEC---CHHHHCCCC--CCC---CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCC-CCCCCCHHHCCHHHHHH
Q ss_conf 886401---101102545--568---579997001200176651544567788876541144-57783123200112321
Q gi|254780153|r 166 VICDAT---SAVFARHID--FNK---LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVP-SWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 166 livD~v---Ss~g~~p~d--~~~---iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (391)
+=|||. |.+++.+++ +.+ .|-.-+-..|.+..-=--+...++++- .... -.-.|-|++ +....
T Consensus 268 LHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~-----~~~~~~~vdp~yL~---h~~~~ 339 (511)
T KOG0628 268 LHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGT-----KLSRAFNVDPLYLK---HAYQG 339 (511)
T ss_pred EEEEHHHCCCCCCCHHHHHHHHCCHHHCCCCCCHHHEEEEEEEEECCEEECCC-----EEEEEEECCHHHHC---CHHHC
T ss_conf 99634531543158878877502233303357852603776530003450476-----04666503827644---43323
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 03347864466644889999999--9862010318999999997799999998747971676688200365317898247
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDA--LLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~--l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391)
. ....--..-|=-.-+..|..- ++.+--+ ++.+..++|.+.++.+.+-+.+-+-|+... + +-...+||+.++
T Consensus 340 ~-~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve-~lq~~iR~h~~La~~fe~lv~~d~~FE~~~--~--~~lgLvcFRlk~ 413 (511)
T KOG0628 340 S-APDYRHWQIPLGRRFRSLKLWFVLRSYGVE-NLQNYIREHVRLAKEFETLVRADPRFEIVN--K--RILGLVCFRLKG 413 (511)
T ss_pred C-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCEEEC--C--CCCCEEEEEECC
T ss_conf 6-888210115200113267899999988688-999999999999999999860487415502--2--100215775258
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE-EEEE-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3101137345678889999988862828726655676750-5686-15888999999999999999999999
Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG-LRVW-VGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~-~RIg-~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
.+.. -+.+.+++...+-+. +..--..|+. +|-- +.+..+.+||+.-.+-|.....+.+.
T Consensus 414 ~N~~----------ne~Ll~~in~~g~i~-l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~ 474 (511)
T KOG0628 414 DNEI----------NEALLNRLNSSGRIH-LVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFE 474 (511)
T ss_pred CCHH----------HHHHHHHHHHCCCEE-EEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 7478----------999999997369689-977631466999998247878578899999999999999876
No 340
>KOG1412 consensus
Probab=62.77 E-value=11 Score=17.41 Aligned_cols=325 Identities=11% Similarity=0.094 Sum_probs=160.1
Q ss_pred CCCCCCCCCCCCCC---CHHHHHHHHHHHCCCCCCCC------------HHHHHHHHHHHHHHHHHHCCCCCCEEEEE-C
Q ss_conf 89988868887768---96899998632103653289------------88999999999999999688998579997-4
Q gi|254780153|r 10 KPKRPFFSSGPCAK---RPGWSLGILEGALLGRSHRC------------VLGKERINKAIQLTRKVLEVPENYRIAIV-P 73 (391)
Q Consensus 10 ~p~~~~F~pGP~~~---~p~~v~~~~~~~~l~~sHRs------------~~f~~i~~~~~~~l~~l~~~p~~y~v~~l-~ 73 (391)
-|.+.|.+-|--+. .| |||..+......+.|+. +.|.+--.++.-+-.... +.++ +++=+ +
T Consensus 29 ~p~KvnL~igAYRtd~g~P-WvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a-~kE~-Rv~~vQs 105 (410)
T KOG1412 29 DPVKVNLGIGAYRTDDGKP-WVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPA-IKED-RVFGVQS 105 (410)
T ss_pred CCCEEECCCCEEECCCCCE-EEEHHHHHHHHHCCCCHHCCCHHCCCCCCHHHHHHHHHHHCCCCCHH-HHHC-CCCCEEE
T ss_conf 7505502210477488986-67535543112036740105111331486356666587700788534-3322-1120242
Q ss_pred CCCHHHHHHHHHHC--CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCC--CCCHH----HCCCC--CCEEEEE
Q ss_conf 87348999875320--578970799707368888876532387630674057776--57867----67855--6579974
Q gi|254780153|r 74 ASDTGAVEMALWSL--LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGS--LPDFS----KVDFD--RDVVFVW 143 (391)
Q Consensus 74 GsgT~~~ea~~~nl--~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~--~~~~~----~~~~~--~~v~~~h 143 (391)
=||||+.-...--| .-+...+++.+-.|..-. ..+++.|...+..+..+..+ ..+++ +++.+ ..+.++|
T Consensus 106 lsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~-~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLh 184 (410)
T KOG1412 106 LSGTGALRIAADFLATFYNKNTVYVSNPTWENHH-AIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILH 184 (410)
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHH-HHHHHCCCCEEEEEEEECCCCCEECHHHHHHHHHHCCCCCEEEEE
T ss_conf 1565324566788887524652674388606778-899873884455666315777121399999898638987378620
Q ss_pred EE--CCCCEEECCEEE--E---CCCCCCEEEEEE-CCHHHHCCC--CCCC--------CEEEE-ECCHHCCCCC----CC
Q ss_conf 20--242022032035--0---256861488640-110110254--5568--------57999-7001200176----65
Q gi|254780153|r 144 NG--TTSGVCVPDVGF--I---PESREGLVICDA-TSAVFARHI--DFNK--------LDVVT-FSAQKVLGGE----AG 200 (391)
Q Consensus 144 ~E--TstGv~~~~~~~--~---~~~~~~llivD~-vSs~g~~p~--d~~~--------iDv~~-a~sQK~l~~p----pG 200 (391)
.+ .-||+.-..+.+ + -+.+..+.+.|. -+.|.+=+. |.|. +.+.+ -|.-||+|.- .-
T Consensus 185 aCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGn 264 (410)
T KOG1412 185 ACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGN 264 (410)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCC
T ss_conf 01369878997889999999999744760354202101246995410899999996187388776656431664655363
Q ss_pred CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH-------HHHHCCCCHHHHH
Q ss_conf 154456778887654114457783123200112321033478644666448899999999-------8620103189999
Q gi|254780153|r 201 FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDAL-------LWLKKMGGLSACV 273 (391)
Q Consensus 201 l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l-------~~i~~~gGl~~~~ 273 (391)
+.+|. ...+.. +...+...... ..+..-||..+-...++.| +|+ ..+..|-
T Consensus 265 ltvv~-~n~a~i-----------~~v~SQl~lvi-------R~~~SNPPAyGArIV~kvL~tP~lre~W~---~sik~Ms 322 (410)
T KOG1412 265 LTVVV-NNPAVI-----------AGVKSQLTLVI-------RSNWSNPPAYGARIVHKVLSTPELREQWI---QSIKTMS 322 (410)
T ss_pred EEEEE-CCHHHH-----------HHHHHHHHHHH-------HHCCCCCCCHHHHHHHHHHCCHHHHHHHH---HHHHHHH
T ss_conf 69994-475577-----------77887779988-------61267885114589999846888899999---9999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC
Q ss_conf 99997799999998747971676688200365317898247310113734567888999998886282872665567675
Q gi|254780153|r 274 ERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPL 353 (391)
Q Consensus 274 ~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~ 353 (391)
.|..+....|++.+.+++--.. =++--...--|.+.. +. ...+..|.++--++-+.
T Consensus 323 sRI~~MR~aLrd~L~aL~TPGt----WDHI~~QiGMFSyTG-----Lt--------p~qV~~li~~h~vyLl~------- 378 (410)
T KOG1412 323 SRIKKMRTALRDHLVALKTPGT----WDHITQQIGMFSYTG-----LT--------PAQVDHLIENHKVYLLS------- 378 (410)
T ss_pred HHHHHHHHHHHHHHHHCCCCCC----HHHHHHHCCCEEECC-----CC--------HHHHHHHHHHCEEEEEC-------
T ss_conf 9999999999999986189985----778876505143148-----99--------89999998736389943-------
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 05686158889999999999999999999998
Q gi|254780153|r 354 GLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391)
Q Consensus 354 ~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391)
.=||++-| ....+|+-..+|||.+....|++
T Consensus 379 ~GRInisG-LN~~NveyVAkAIde~Vr~~~~~ 409 (410)
T KOG1412 379 DGRINISG-LNMKNVEYVAKAIDETVRAIKSN 409 (410)
T ss_pred CCCEEEEC-CCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 88376614-56545899999999999752368
No 341
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=62.64 E-value=11 Score=17.39 Aligned_cols=69 Identities=10% Similarity=0.187 Sum_probs=42.9
Q ss_pred HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE--ECCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 99999996889985799974873489998753205789707997--07368888876532387630674057
Q gi|254780153|r 54 IQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA--WESFGLGWMSDIRQLSLQDVREFTAP 123 (391)
Q Consensus 54 ~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~--~g~~~~r~~~~~~~~~~~~~~~~~~~ 123 (391)
...+-+.+++..+.+|+- -|+|||-..|++..++++...++.+ .-...+...+.+.+.+..++.....+
T Consensus 65 ~a~ml~~L~l~~~~~VLe-IGtGsGY~tAlla~lvg~~g~V~siE~~~~l~~~A~~~l~~~~~~nv~~~~gd 135 (214)
T PRK13942 65 VAIMCELLDLDEGQKVLE-IGTGSGYHAAVVAEIVGKSGKVTTIERIPELAEKAKKNLKKLGYENVEVILGD 135 (214)
T ss_pred HHHHHHHHCCCCCCEEEE-ECCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 999999727999997999-67995299999999747678579997179999999999986376875898567
No 342
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=60.48 E-value=12 Score=17.15 Aligned_cols=52 Identities=21% Similarity=0.252 Sum_probs=30.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEE
Q ss_conf 32898899999999999999968899857999748734899987532057897079
Q gi|254780153|r 40 SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDV 95 (391)
Q Consensus 40 sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~ 95 (391)
|-|+..-...++.+++.-+.+-.- . .++++||++|.||++.......+...+
T Consensus 23 s~~~~~~~~~~~~A~~lg~~la~~-g---~~V~tGG~~GiMea~~~gA~~~gg~~v 74 (205)
T COG1611 23 SARGIEPEEYYELARELGRELAKR-G---LLVITGGGPGVMEAVARGALEAGGLVV 74 (205)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHC-C---CEEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf 888889889999999999999767-9---889969865250578899987698389
No 343
>pfam09659 Cas_Csm6 CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.
Probab=51.49 E-value=17 Score=16.22 Aligned_cols=49 Identities=16% Similarity=0.138 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--HCCCCC
Q ss_conf 3289889999999999999996889985799974873489998753--205789
Q gi|254780153|r 40 SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW--SLLGYR 91 (391)
Q Consensus 40 sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~--nl~~~~ 91 (391)
-|+=..|...+.+....|+.-. |+ .++++=-.|||-||.+++. |+.++-
T Consensus 17 ~~~fd~f~~~f~~~~~~i~~~~--~d-~eilLNlSSGTPQmks~L~~~~~~~~~ 67 (382)
T pfam09659 17 PQQFDIFYPVFEKELIILHNAY--PD-CEILLNLSSGTPQMKSALHLINLTTPF 67 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC--CC-CEEEEECCCCCHHHHHHHHHHHHCCCC
T ss_conf 8774688999999999998529--98-669986688968999999999964754
No 344
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=49.67 E-value=18 Score=16.04 Aligned_cols=322 Identities=15% Similarity=0.126 Sum_probs=170.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHC-------CCC----CCEEEEECCCCHH
Q ss_conf 9888688877689689999863210365328--98899999999999999968-------899----8579997487348
Q gi|254780153|r 12 KRPFFSSGPCAKRPGWSLGILEGALLGRSHR--CVLGKERINKAIQLTRKVLE-------VPE----NYRIAIVPASDTG 78 (391)
Q Consensus 12 ~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHR--s~~f~~i~~~~~~~l~~l~~-------~p~----~y~v~~l~GsgT~ 78 (391)
+..-|+==|+ ++...++|...+= ||. ++-=..=...+++-+.+.+. -++ .-.|++ .+|++-
T Consensus 41 DPt~~gnL~~---~~~~~~a~~~~v~--S~~ynGY~p~vG~~~Ar~aia~~y~~sfvhn~~~~~~~~a~~Vvl-~SGCS~ 114 (415)
T TIGR01264 41 DPTVFGNLPT---SEEAMQAMKESVD--SGKYNGYAPTVGALEAREAIAEYYRNSFVHNKRPDGSIEADDVVL-CSGCSH 114 (415)
T ss_pred CCCCCCCCCC---CHHHHHHHHHHHC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-CCCCHH
T ss_conf 8888889988---8899999998752--566067720013488889999987631100236687201276477-167027
Q ss_pred HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC-CCCC--CCCHHHC----CCCCCEEEEEE-ECCCCE
Q ss_conf 99987532057897079970736888887653238763067405-7776--5786767----85565799742-024202
Q gi|254780153|r 79 AVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTA-PYGS--LPDFSKV----DFDRDVVFVWN-GTTSGV 150 (391)
Q Consensus 79 ~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~-~~g~--~~~~~~~----~~~~~v~~~h~-ETstGv 150 (391)
|+++++.-+..+|+-+++=-=||... ..+++-.+..+..+.- -.++ -.|++++ |..+...++-| ..-+|-
T Consensus 115 Al~~ai~a~Ad~G~nvLVP~PGFplY--~Tlc~~~~i~~~~Y~~d~~d~~w~~DL~~l~~LiDd~T~~l~vnNPSNPcGS 192 (415)
T TIGR01264 115 ALEMAIEALADAGQNVLVPRPGFPLY--ETLCKALGIEVKLYNLDLPDEDWEIDLKQLESLIDDKTKALIVNNPSNPCGS 192 (415)
T ss_pred HHHHHHHHHCCCCCEEECCCCCCCHH--HHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
T ss_conf 89999999537978063078887207--8864014762000025798733566489886312567407888375778898
Q ss_pred EEC---CEEE--ECCCCCCEEEEEECCH------------HHHC-CCCCCCCE-EEEECCHHCCCCCCC--CEEEEECHH
Q ss_conf 203---2035--0256861488640110------------1102-54556857-999700120017665--154456778
Q gi|254780153|r 151 CVP---DVGF--IPESREGLVICDATSA------------VFAR-HIDFNKLD-VVTFSAQKVLGGEAG--FGIIILSPA 209 (391)
Q Consensus 151 ~~~---~~~~--~~~~~~~llivD~vSs------------~g~~-p~d~~~iD-v~~a~sQK~l~~ppG--l~~v~~s~~ 209 (391)
.+. +.++ +|+.+..++++|=+=. |-+. .++ .++= +...|--|.|. .|| ||=+++-++
T Consensus 193 vF~~~Hl~~l~a~A~~~~Lpi~ADEIY~~~VF~GkDPnatF~~lA~L~-s~VP~~~cgG~AKr~l-VPGWRLGWli~hd~ 270 (415)
T TIGR01264 193 VFRREHLEELLALAERLKLPIIADEIYGDMVFKGKDPNATFTPLASLS-SKVPILSCGGLAKRWL-VPGWRLGWLIIHDR 270 (415)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCC-CCCCEEEECCCCCCCC-CCCCCCCCEEEECC
T ss_conf 878788999999987538723664202565138867864220202377-9988687076320022-47611024788878
Q ss_pred HHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88765411445778312320011232103347864466644889999999986201031899999999779999999874
Q gi|254780153|r 210 SVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQE 289 (391)
Q Consensus 210 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~ 289 (391)
....-+ ....-.+.. -+-.-=|+|..==||.+.|..-=++ =++.....-+.+|..+|+.|+.
T Consensus 271 ----------~~~~~~--e~~~GL~~l-----s~~i~GpntlvQGAl~~iL~~TPq~-Yf~~~~~~l~~nA~~~y~~La~ 332 (415)
T TIGR01264 271 ----------KGVLRD--EVKDGLKKL-----SQRILGPNTLVQGALPEILLKTPQE-YFDGTVSVLESNAMLVYEILAE 332 (415)
T ss_pred ----------CCCCCH--HHHHHHHHH-----HCHHCCCCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_conf ----------886502--688999997-----2300462011442179886406556-7789999987408999988510
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEC-CC-CCCHHH
Q ss_conf 7971676688200365317898247310113734567888999998886282872665567675056861-58-889999
Q gi|254780153|r 290 NDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV-GV-TVEKED 367 (391)
Q Consensus 290 ~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~-~g-~i~~~d 367 (391)
-.|+.+.-+. +.|=+-+.+.-..+.. ...+-.|...+ +.+|++.+=-|.==..|.-|||-+ -+ .+-.|-
T Consensus 333 v~Gl~pv~P~----GaMY~m~~i~~e~F~e--~k~Dv~F~~~L---~~E~sV~cLPG~~F~~PGf~Rvv~T~P~~~~~EA 403 (415)
T TIGR01264 333 VPGLRPVMPK----GAMYMMVGIELEKFPE--FKSDVEFVEKL---VEEESVFCLPGSCFEYPGFFRVVLTVPSSMMEEA 403 (415)
T ss_pred CCCCEEECCC----CCEEEEEEEECCCCCC--CCCHHHHHHHH---HHHCCCEECCHHHHCCCCCEEEEEECCHHHHHHH
T ss_conf 6886111488----7558756002001777--24117999998---5114630464164458995899970780678999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780153|r 368 LLL 370 (391)
Q Consensus 368 v~~ 370 (391)
+.+
T Consensus 404 ~~R 406 (415)
T TIGR01264 404 CSR 406 (415)
T ss_pred HHH
T ss_conf 999
No 345
>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=49.36 E-value=18 Score=16.01 Aligned_cols=306 Identities=16% Similarity=0.112 Sum_probs=165.8
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 8886888776-89689999863210--36532898899999999999999968899857999748734899987532057
Q gi|254780153|r 13 RPFFSSGPCA-KRPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391)
Q Consensus 13 ~~~F~pGP~~-~~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391)
-.-||+-=++ -+|..++.++...+ +++ -=++++.. .+.-+.+--+++.| .|+- +-|++..+..++..+..
T Consensus 7 lLDFsAninPlgpP~S~~aa~~~aLd~~~r-YPD~dY~h----lrqA~AdH~q~~~d-wvl~-gnG~~e~i~la~~t~~~ 79 (349)
T TIGR01140 7 LLDFSANINPLGPPASVKAALAAALDALER-YPDDDYIH----LRQALADHHQVAAD-WVLA-GNGELESIRLAAETLVS 79 (349)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCHHH----HHHHHHHHHCCCCC-CEEC-CCCCHHHHHHHHHHCCC
T ss_conf 032434578888760204589874278760-88843189----99998654125601-2545-99727888998861478
Q ss_pred CCCEEEEEECCHHHHHHHHHHHCCCCCEE---E-EE--CCCCCCCCHHHCCC------CCC-EEEEEEECCCCEEECCEE
Q ss_conf 89707997073688888765323876306---7-40--57776578676785------565-799742024202203203
Q gi|254780153|r 90 YRGVDVLAWESFGLGWMSDIRQLSLQDVR---E-FT--APYGSLPDFSKVDF------DRD-VVFVWNGTTSGVCVPDVG 156 (391)
Q Consensus 90 ~~~~~~~~~g~~~~r~~~~~~~~~~~~~~---~-~~--~~~g~~~~~~~~~~------~~~-v~~~h~ETstGv~~~~~~ 156 (391)
.|+.++++.=+|++. .......| ++.. + +. .+|...-+++++.. ..+ +..|-=..-||.......
T Consensus 80 ~Gd~~~V~~P~F~eY-gR~~~~~G-ae~~ti~w~~~~~~~W~~~~dPseiA~l~A~~s~h~~lilctPnNPtG~l~~r~~ 157 (349)
T TIGR01140 80 RGDAVLVVAPAFAEY-GRELELAG-AELKTIRWSLDEADGWRVLRDPSEIALLDAVTSEHDLLILCTPNNPTGDLLERDA 157 (349)
T ss_pred CCCEEEEECCCCHHH-HHHHHHCC-CCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHH
T ss_conf 887578708870267-99998569-8122345773168887455764566541268833135311176769898622478
Q ss_pred E---E--CCCCCCEEEEEEC-CHHH--HCCC----CCCC-CEEEEE-CCHHCCCCCCCC--EEEEECHH-HHHHHHHCCC
Q ss_conf 5---0--2568614886401-1011--0254----5568-579997-001200176651--54456778-8876541144
Q gi|254780153|r 157 F---I--PESREGLVICDAT-SAVF--ARHI----DFNK-LDVVTF-SAQKVLGGEAGF--GIIILSPA-SVERLEKYVP 219 (391)
Q Consensus 157 ~---~--~~~~~~llivD~v-Ss~g--~~p~----d~~~-iDv~~a-~sQK~l~~ppGl--~~v~~s~~-al~~~~~~~~ 219 (391)
+ . |+.-+.-+++|=- =+|. +.+- +..+ =.+++. |--|=+ +-||| |+++.+++ ++.+....+.
T Consensus 158 l~A~a~rc~~~N~~LllDEAF~dF~pPG~E~~l~p~l~~~P~~~vlRSLTKfy-~lPGLRlGylva~~Da~la~~r~~r~ 236 (349)
T TIGR01140 158 LRALADRCKAVNIELLLDEAFLDFLPPGEETSLVPSLKDTPNVVVLRSLTKFY-ALPGLRLGYLVAVDDALLARLRAARR 236 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCHHHHH-CCHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf 99999888874046666556515789864434341332689789971115540-25024454555166178999997428
Q ss_pred CCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 57783123200112321033478644666448899999999862010318999999997799999998747971676688
Q gi|254780153|r 220 SWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299 (391)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~ 299 (391)
+|. -++..-.+-..+|+ +++=.+..++.-..-...+|..+...+++..++
T Consensus 237 pW~-------------------------vnalAaaag~~al~---~sef~q~tw~wl~~erar~~qaL~~lP~l~v~P-- 286 (349)
T TIGR01140 237 PWS-------------------------VNALAAAAGAAALR---DSEFRQETWRWLAEERARLRQALADLPLLDVYP-- 286 (349)
T ss_pred CCC-------------------------CCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--
T ss_conf 998-------------------------77689999999876---678999998743667789999997178875588--
Q ss_pred CCCCCCCEEEE-EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE-CCCCCCCCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 20036531789-824731011373456788899999888628287-2665567675-05686158889999999999999
Q gi|254780153|r 300 ETTRSNTSICM-KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAY-DIGSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 300 ~~~rS~~~v~~-~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
|.++-.+ ++..+. .+ .....+.+++|.+ +--.||..+. -+||.+ .+++|-++|++||.
T Consensus 287 ----s~anfLLl~~~~~~-----~d-------l~~~llt~~~IliRdc~~fpgLds~~~RVAv---Rt~a~N~rLlaALa 347 (349)
T TIGR01140 287 ----SRANFLLLKVERED-----VD-------LQEELLTKERILIRDCLSFPGLDSDYYRVAV---RTAAENDRLLAALA 347 (349)
T ss_pred ----CCCCCEEEECCCCC-----HH-------HHHHHHHHCCCCHHHCCCCCCCCCCEEEEEE---CCHHHHHHHHHHHH
T ss_conf ----88761145458986-----88-------9999987434100120578888875278885---28554789999961
Q ss_pred H
Q ss_conf 9
Q gi|254780153|r 377 W 377 (391)
Q Consensus 377 ~ 377 (391)
.
T Consensus 348 ~ 348 (349)
T TIGR01140 348 D 348 (349)
T ss_pred C
T ss_conf 3
No 346
>PRK07206 hypothetical protein; Provisional
Probab=43.46 E-value=23 Score=15.43 Aligned_cols=16 Identities=6% Similarity=-0.164 Sum_probs=10.1
Q ss_pred CCCEEEEEECCHHHHC
Q ss_conf 8614886401101102
Q gi|254780153|r 162 REGLVICDATSAVFAR 177 (391)
Q Consensus 162 ~~~llivD~vSs~g~~ 177 (391)
.|.-+.||++|.=|-.
T Consensus 199 ~G~EysVe~vs~~G~h 214 (415)
T PRK07206 199 IGTEYVVNTVSINGNH 214 (415)
T ss_pred CCCEEEEEEEEECCCE
T ss_conf 6857899999878968
No 347
>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=42.21 E-value=24 Score=15.31 Aligned_cols=20 Identities=20% Similarity=0.489 Sum_probs=14.1
Q ss_pred CCCCEEEEEECCHHHHCCCC
Q ss_conf 68614886401101102545
Q gi|254780153|r 161 SREGLVICDATSAVFARHID 180 (391)
Q Consensus 161 ~~~~llivD~vSs~g~~p~d 180 (391)
.+-.++|+|.++++...+++
T Consensus 102 ~~~~lvViDSi~tl~~~e~~ 121 (218)
T cd01394 102 EKVDLVVVDSATALYRLELG 121 (218)
T ss_pred CCCCEEEEECCHHHHHHHCC
T ss_conf 47729999140455455406
No 348
>PRK13972 glutathione S-transferase; Provisional
Probab=41.24 E-value=18 Score=16.04 Aligned_cols=22 Identities=14% Similarity=0.424 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8999999997799999998747
Q gi|254780153|r 269 LSACVERCNANAAVLFQFIQEN 290 (391)
Q Consensus 269 l~~~~~r~~~~a~~l~~~i~~~ 290 (391)
.....++.+...+.+++.+++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~le~~ 147 (215)
T PRK13972 126 IPYAIERYQVETQRLYHVLNKR 147 (215)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4589999999999999999998
No 349
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=39.70 E-value=26 Score=15.07 Aligned_cols=300 Identities=15% Similarity=0.059 Sum_probs=143.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 28988999999999999999688998579997487348999875320578970799707368888876532387630674
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF 120 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~ 120 (391)
-.|..|..+ ++-++++|+.+. ++. +-.|.++=......++++|+. ++.|..| .-+...+...+...++..
T Consensus 50 AGs~sf~~l----~~av~d~~g~~~---v~P-tHQGRaAE~iLf~~~~k~g~~-v~~N~hF-dTTrahie~~G~~~vdl~ 119 (431)
T cd00617 50 AGSKSFYDL----EDAVQDLFGFKH---IIP-THQGRGAENILFSILLKPGRT-VPSNMHF-DTTRGHIEANGAVPVDLV 119 (431)
T ss_pred CCCCCHHHH----HHHHHHHCCCCC---EEE-CCCCHHHHHHHHHHHCCCCCE-ECCCCCC-CCHHHHHHHCCCEEEECC
T ss_conf 578028999----999998649971---247-687679999999983679988-4468787-325899997699787331
Q ss_pred EC---------CCCCCCCHHHCC----C--CCCEEE---EEEECCCCEEEC-------CEEEECCCCCCEEEEEECCHH-
Q ss_conf 05---------777657867678----5--565799---742024202203-------203502568614886401101-
Q gi|254780153|r 121 TA---------PYGSLPDFSKVD----F--DRDVVF---VWNGTTSGVCVP-------DVGFIPESREGLVICDATSAV- 174 (391)
Q Consensus 121 ~~---------~~g~~~~~~~~~----~--~~~v~~---~h~ETstGv~~~-------~~~~~~~~~~~llivD~vSs~- 174 (391)
.. |+.-..|++.++ . ...+.+ +-...+.|- .| ....+|+.++++++.|++=-.
T Consensus 120 ~~ea~d~~~~~pFKGN~Dl~kLe~~i~~~g~~~I~~v~~tiTnN~~GG-QPVSm~Nir~v~~la~~~giplvlDaaRfaE 198 (431)
T cd00617 120 IDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGG-QPVSMANLREVRELAHKYGIPVVLDAARFAE 198 (431)
T ss_pred CHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEHHHHHH
T ss_conf 500048577788488889999999998738666108999986368788-5667899999999999809979987667887
Q ss_pred ----HH--CC----CC--------CCCCEEEEECCHHCCCCCCCCEEEEECHHHH-HHHHHCCCCCCCCCHHHCCHHHHH
Q ss_conf ----10--25----45--------5685799970012001766515445677888-765411445778312320011232
Q gi|254780153|r 175 ----FA--RH----ID--------FNKLDVVTFSAQKVLGGEAGFGIIILSPASV-ERLEKYVPSWPLPKIFRMVKGGRV 235 (391)
Q Consensus 175 ----g~--~p----~d--------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391)
-- +| .. ++-.|.+++|+-|--..--| ++++++++.+ +++......
T Consensus 199 NAyFIk~rE~gy~d~si~eI~rEmfs~aDg~tmSaKKD~~vniG-G~ia~~D~~l~~~~~~~~i~--------------- 262 (431)
T cd00617 199 NAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEEARQRVVL--------------- 262 (431)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCC-CEEEECCHHHHHHHHHHCCC---------------
T ss_conf 68999843530247999999999985402789970314532455-67885779999999754320---------------
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473
Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391)
Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391)
.+-.-|+.--+.--+-++...|++..++.=+..+....+ .+-+.+.+.+. +.+.... --++.+...
T Consensus 263 ---~EGf~TYGGlaGRD~eAlA~GL~E~~d~~yl~~Ri~qv~----yL~~~L~~~Gv--Pvv~P~G-----GHav~iDA~ 328 (431)
T cd00617 263 ---YEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVR----YLGDRLDEAGV--PIVEPAG-----GHAVFIDAR 328 (431)
T ss_pred ---CCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHH----HHHHHHHHCCC--CEECCCC-----CEEEEEEHH
T ss_conf ---058744356325349998654075436799997799999----99999998899--6666897-----438997467
Q ss_pred C-CCCCCHHHHHHHHHHHHHHHHHCCEEEC--CCC---CCCCC---------CEEEEECCC-CCCHHHHHHHHHHHHHHH
Q ss_conf 1-0113734567888999998886282872--665---56767---------505686158-889999999999999999
Q gi|254780153|r 316 D-IASLDINSQKSFCKSMLSFLEKEEIAYD--IGS---YRDAP---------LGLRVWVGV-TVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 316 ~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~---~r~~~---------~~~RIg~~g-~i~~~dv~~L~~aLe~~~ 379 (391)
. +.-+ ....--...+...|..++|+-+ +|. .|... .-.|..+-- .-+.+.++-..++|.|+|
T Consensus 329 ~flPhi--p~~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grd~~t~e~~~~~~ElvRLAiPRRvYT~~H~dyva~~l~~l~ 406 (431)
T cd00617 329 EFLPHI--PQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALY 406 (431)
T ss_pred HHCCCC--CHHHCCHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHH
T ss_conf 746899--814391899999999970945685402002548887666788622256713502035879999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780153|r 380 YFQK 383 (391)
Q Consensus 380 ~~~k 383 (391)
++..
T Consensus 407 ~~r~ 410 (431)
T cd00617 407 ERRE 410 (431)
T ss_pred HHHH
T ss_conf 5587
No 350
>cd03148 GATase1_EcHsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31). Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31). This group includes proteins similar to EcHsp31. EcHsp31 has chaperone activity. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. This Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. EcHsp31 is a homodimer.
Probab=39.30 E-value=26 Score=15.03 Aligned_cols=34 Identities=12% Similarity=0.017 Sum_probs=16.6
Q ss_pred EECCHHHHHHH---HHHHCCCCCEEEEECCCCCCCCHHH
Q ss_conf 70736888887---6532387630674057776578676
Q gi|254780153|r 97 AWESFGLGWMS---DIRQLSLQDVREFTAPYGSLPDFSK 132 (391)
Q Consensus 97 ~~g~~~~r~~~---~~~~~~~~~~~~~~~~~g~~~~~~~ 132 (391)
.+|.|....+. .+.+.| .++++.+ |.|..+..+.
T Consensus 20 ~TG~~l~Ela~Py~~f~~AG-~~VdiAS-p~Gg~~~~d~ 56 (232)
T cd03148 20 STGNHPVEMLLPLYHLHAAG-FDFDVAT-LSGLPVKFEY 56 (232)
T ss_pred CCCCCHHHHHHHHHHHHHCC-CEEEEEC-CCCCCCCCCC
T ss_conf 78789999999999999889-8299989-9999889785
No 351
>pfam01135 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
Probab=38.06 E-value=27 Score=14.90 Aligned_cols=70 Identities=16% Similarity=0.139 Sum_probs=42.3
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE--ECCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 999999996889985799974873489998753205789707997--07368888876532387630674057
Q gi|254780153|r 53 AIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA--WESFGLGWMSDIRQLSLQDVREFTAP 123 (391)
Q Consensus 53 ~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~--~g~~~~r~~~~~~~~~~~~~~~~~~~ 123 (391)
+...+-+.+++..+.+|+- -|+|||=..|++..++++...++.+ .-.......+.+.+.+..++.....+
T Consensus 61 ~~a~ml~~L~l~~g~~VLe-IGtGsGY~tAlLa~l~~~~g~V~~iE~~~~l~~~A~~~l~~~~~~nV~~~~gd 132 (205)
T pfam01135 61 MHAMMLELLELKPGMRVLE-IGSGSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNLEKLGLENVIVVVGD 132 (205)
T ss_pred HHHHHHHHCCCCCCCEEEE-ECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 9999999707899998999-66996599999999838787699983589999999999998488865898456
No 352
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=37.97 E-value=27 Score=14.90 Aligned_cols=77 Identities=19% Similarity=0.123 Sum_probs=47.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH-CCC--CCCEEEEECCCC-HHHHHHHHHHCC----CCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 3289889999999999999996-889--985799974873-489998753205----78970799707368888876532
Q gi|254780153|r 40 SHRCVLGKERINKAIQLTRKVL-EVP--ENYRIAIVPASD-TGAVEMALWSLL----GYRGVDVLAWESFGLGWMSDIRQ 111 (391)
Q Consensus 40 sHRs~~f~~i~~~~~~~l~~l~-~~p--~~y~v~~l~Gsg-T~~~ea~~~nl~----~~~~~~~~~~g~~~~r~~~~~~~ 111 (391)
.-|+.+|.+-++--+....... ..| +.+++.+|+.|| ..+|.|++...+ ..|..++.+..+|.+-.-.++..
T Consensus 360 ~lr~~~F~~~~~~~~~~~~~~~~~~~~~~~~rIaIlt~GgdapGMNAAiRA~Vr~~~~~G~~v~gI~~Gf~GL~~g~i~~ 439 (762)
T cd00764 360 ALRGKSFDKNWNLYKLLAIELPQPLPEKTNLNIAIVNVGAPAAGMNAAVRSAVRYGLAHGHRPYAIYDGFEGLAKGQIVE 439 (762)
T ss_pred HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEE
T ss_conf 74377789999999986034777788667706999856889614779999999999988999999925843674798677
Q ss_pred CCCCC
Q ss_conf 38763
Q gi|254780153|r 112 LSLQD 116 (391)
Q Consensus 112 ~~~~~ 116 (391)
+...+
T Consensus 440 l~~~~ 444 (762)
T cd00764 440 LGWID 444 (762)
T ss_pred CCHHH
T ss_conf 78456
No 353
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=37.87 E-value=27 Score=14.89 Aligned_cols=332 Identities=13% Similarity=0.119 Sum_probs=152.8
Q ss_pred CCCCCCCCCCCCC-CCCCCHHHHHH---HHHHHCCCCCCC---------CHH-HHHHHHHHHHHHHHHHCCC-CCCEEEE
Q ss_conf 6468998886888-77689689999---863210365328---------988-9999999999999996889-9857999
Q gi|254780153|r 7 PTRKPKRPFFSSG-PCAKRPGWSLG---ILEGALLGRSHR---------CVL-GKERINKAIQLTRKVLEVP-ENYRIAI 71 (391)
Q Consensus 7 ~~~~p~~~~F~pG-P~~~~p~~v~~---~~~~~~l~~sHR---------s~~-f~~i~~~~~~~l~~l~~~p-~~y~v~~ 71 (391)
-++-|...+.|.| |..+ |+ +.+ .....|+. ||. +++ ...+++.+...+++-++-. ++--+.+
T Consensus 26 ~Lrt~g~imLggGNPa~i-Pe-m~~~f~~~~aemla-~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yGwnit~~NIal 102 (417)
T COG3977 26 GLRTPGAIMLGGGNPARI-PE-MDDYFQDLLAEMLA-SGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIAL 102 (417)
T ss_pred HCCCCCCEEECCCCCCCC-HH-HHHHHHHHHHHHHH-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 515887156569985437-34-99999999999985-5607778754899764169999999999897578766441563
Q ss_pred ECCCCHHHHHHHHHHCCC----CCCE--E-EEEE---CCHHHHHHH-HHHHCCCCCEEEEE-CCCCCCCCHHHCCCCCC-
Q ss_conf 748734899987532057----8970--7-9970---736888887-65323876306740-57776578676785565-
Q gi|254780153|r 72 VPASDTGAVEMALWSLLG----YRGV--D-VLAW---ESFGLGWMS-DIRQLSLQDVREFT-APYGSLPDFSKVDFDRD- 138 (391)
Q Consensus 72 l~GsgT~~~ea~~~nl~~----~~~~--~-~~~~---g~~~~r~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~- 138 (391)
..||-|+-|-. .|+++ +|+. + +... -+++.--.. ++---...+.+.+. .-...-+|++.+.....
T Consensus 103 TnGSQs~fFYl--fNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~e~~ 180 (417)
T COG3977 103 TNGSQSAFFYL--FNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIGEST 180 (417)
T ss_pred CCCCCCHHHHH--HHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHCCCCCE
T ss_conf 27861158899--8875476679851046643683432655446572123552687532666662213778881336760
Q ss_pred --EEEEEEECCCCEEECCEE-----EECCCCCCEEEEEECCHHHHCCCC---------CCCCE-EEEECCHHCCCCCCCC
Q ss_conf --799742024202203203-----502568614886401101102545---------56857-9997001200176651
Q gi|254780153|r 139 --VVFVWNGTTSGVCVPDVG-----FIPESREGLVICDATSAVFARHID---------FNKLD-VVTFSAQKVLGGEAGF 201 (391)
Q Consensus 139 --v~~~h~ETstGv~~~~~~-----~~~~~~~~llivD~vSs~g~~p~d---------~~~iD-v~~a~sQK~l~~ppGl 201 (391)
+++.--..-||-.....+ .++..+++++++|-. .+.|++ .|+=. ++.+|-.| +|. ||.
T Consensus 181 g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnA---Yg~PFP~iifsd~~~~w~~NiilC~SLSK-~GL-PG~ 255 (417)
T COG3977 181 GAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNA---YGVPFPGIIFSDATPLWNENIILCMSLSK-LGL-PGS 255 (417)
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC---CCCCCCCEECCCCCCCCCCCEEEEEEHHH-CCC-CCC
T ss_conf 2699647889887736488999899874223896797356---67997862003564156787788831433-489-873
Q ss_pred --EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf --544567788876541144577831232001123210334786446664488999999998620103189999999977
Q gi|254780153|r 202 --GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNAN 279 (391)
Q Consensus 202 --~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~ 279 (391)
++++..++.+......+.-- ++ .....-|++..=..-.-.|..+-++. +.-. ++.+
T Consensus 256 R~GIiIane~viqaitnmn~ii------sL------------ap~~~G~Aiaa~mie~gdl~rlseqV-IrPF---Y~~~ 313 (417)
T COG3977 256 RCGIIIANEKVIQAITNMNGII------SL------------APGRMGPAIAAEMIESGDLLRLSEQV-IRPF---YRNR 313 (417)
T ss_pred EEEEEECCHHHHHHHHHCCCEE------EE------------CCCCCCHHHHHHHHHCCHHHHHHHHH-HHHH---HHHH
T ss_conf 0357962699999997114535------31------------67875689999886024288899986-4388---8988
Q ss_pred HHHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC---------C
Q ss_conf 99999998747-9716766882003653178982473101137345678889999988862828726655---------6
Q gi|254780153|r 280 AAVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY---------R 349 (391)
Q Consensus 280 a~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---------r 349 (391)
.+..-..+.+. +-...+..+++-.- -.-+-+.|= -.-...+.++|.++|+++=.|.| .
T Consensus 314 ~q~~~~~l~~~lp~~~~~iHkpEGAI--FlWLWf~dL----------PItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewp 381 (417)
T COG3977 314 VQTTIAILRRYLPEYRCLIHKPEGAI--FLWLWFKDL----------PITTEELYQRLKARGVLMVPGHYFFPGLDKEWP 381 (417)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCE--EEHHHHCCC----------CCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCC
T ss_conf 99999999986577652542687515--413355358----------766899999998686899446324789998887
Q ss_pred CCCCEEEEECCCCCC--HHHHHHHHHHHHHHHHHH
Q ss_conf 767505686158889--999999999999999999
Q gi|254780153|r 350 DAPLGLRVWVGVTVE--KEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 350 ~~~~~~RIg~~g~i~--~~dv~~L~~aLe~~~~~~ 382 (391)
-..-.+|++.-+.-+ +..|..|.+.+|.+|++.
T Consensus 382 H~hqC~Rmn~~~~~e~ie~Gva~lae~ve~~yq~~ 416 (417)
T COG3977 382 HTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQEV 416 (417)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 61224787536987999999999999999997407
No 354
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=37.86 E-value=27 Score=14.88 Aligned_cols=182 Identities=18% Similarity=0.125 Sum_probs=97.4
Q ss_pred HHHHHHHHCCCCCCCC----HHHHHHHHHHHHHH-HHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf 9998632103653289----88999999999999-999688998-57999748734899987532057897079970736
Q gi|254780153|r 28 SLGILEGALLGRSHRC----VLGKERINKAIQLT-RKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF 101 (391)
Q Consensus 28 v~~~~~~~~l~~sHRs----~~f~~i~~~~~~~l-~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~ 101 (391)
||++....-.+-||-. .-+.++=.+..+++ .++|++... -++-|+ |||-++..++..+++|||.++.+.|.=
T Consensus 40 VL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~i--sGTHAI~~aLfg~LRpgDell~i~G~P 117 (416)
T COG4100 40 VLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQII--SGTHAIACALFGILRPGDELLYITGSP 117 (416)
T ss_pred HHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE--CCHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 999998543530025788877765322667999999985541002310552--360299999984268887477752886
Q ss_pred HHHHHHHHHHCCCCCEEEE-E----------CCCCCCCCHHHCC--CCCCEEEEEEECCCCEEEC-CE------EEE---
Q ss_conf 8888876532387630674-0----------5777657867678--5565799742024202203-20------350---
Q gi|254780153|r 102 GLGWMSDIRQLSLQDVREF-T----------APYGSLPDFSKVD--FDRDVVFVWNGTTSGVCVP-DV------GFI--- 158 (391)
Q Consensus 102 ~~r~~~~~~~~~~~~~~~~-~----------~~~g~~~~~~~~~--~~~~v~~~h~ETstGv~~~-~~------~~~--- 158 (391)
..-.-+.+--++ ...-.+ + ...|++ |-..+. .....-+++.--|.|-... .. +.+
T Consensus 118 YDTLeevIG~rg-~~~gSL~dfgi~Y~~v~Lt~~gki-D~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~v 195 (416)
T COG4100 118 YDTLEEVIGLRG-EGQGSLKDFGIKYKAVPLTADGKI-DIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFV 195 (416)
T ss_pred CHHHHHHHCCCC-CCCCCHHHHCCCEEECCCCCCCCC-CHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 056898756277-785427873855002135668823-389998750855259999732576778864299999999999
Q ss_pred -CCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCC----EEEEECHHHHHHHH
Q ss_conf -256861488640110110254556--8579997001200176651----54456778887654
Q gi|254780153|r 159 -PESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGF----GIIILSPASVERLE 215 (391)
Q Consensus 159 -~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl----~~v~~s~~al~~~~ 215 (391)
....+.++.||-.=.=..+..... +.|++..|-=||-|| |+ +.+.-+.+..+.+.
T Consensus 196 k~inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGG--giaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 196 KEINPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGG--GIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred HHCCCCEEEEEECCCHHHHHCCCCCCCCHHHHCCCEEECCCC--CEEECCCEEECHHHHHHHHC
T ss_conf 844997799980563655411486300533420321327998--66511645524688987641
No 355
>pfam04048 Sec8_exocyst Sec8 exocyst complex component specific domain.
Probab=37.81 E-value=28 Score=14.88 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=18.3
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9986321036532898899999999999999968
Q gi|254780153|r 29 LGILEGALLGRSHRCVLGKERINKAIQLTRKVLE 62 (391)
Q Consensus 29 ~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~ 62 (391)
++-|...-+|..||-++|.++.+.+...|+.+-+
T Consensus 28 L~llD~sSvG~a~~~~~F~~~~~~i~~~L~~vV~ 61 (142)
T pfam04048 28 LQLLDDTSVGLAHRYPEFEQLKKQIEQALQEVVN 61 (142)
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9880845656532336799999999999999999
No 356
>PRK13534 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional
Probab=37.54 E-value=28 Score=14.85 Aligned_cols=95 Identities=13% Similarity=0.060 Sum_probs=54.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-CCCC---CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf 7655646899888688877689689999863210-3653---28988999999999999999688998579997487348
Q gi|254780153|r 3 DMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGAL-LGRS---HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391)
Q Consensus 3 ~~~~~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~-l~~s---HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391)
..+-|.++|. .| |----+.|+. ++.++..+ |-.| ++++...+.-. ..+|+++++.+. .+|+-||+.
T Consensus 22 ~ieTP~~~PV-in--p~~~~i~p~e-l~~~G~~~iITNsYi~~~~~~~~~~a~--~~GlH~~l~~dg----~ImTDSG~f 91 (630)
T PRK13534 22 KIETPTIMPV-IN--PKKQTVDPKE-LKKMGFDIVITNSYIIYKNPELREKAL--EKGIHSLIDFDG----PIMTDSGSF 91 (630)
T ss_pred CEECCCCCCC-CC--CCCCCCCHHH-HHHCCCCEEEEEEEEEEECCCHHHHHH--HHCHHHHCCCCC----CEEECCCCE
T ss_conf 2646831020-46--5536349999-986186589750057750762346666--404798718998----579778863
Q ss_pred HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 999875320578970799707368888876532387630674
Q gi|254780153|r 79 AVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF 120 (391)
Q Consensus 79 ~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~ 120 (391)
|. ..-|++. ...+-.-++++.-+.|+...
T Consensus 92 Q~-------~~yG~ve------v~~~eiv~fQ~~IGsDI~~~ 120 (630)
T PRK13534 92 QL-------SVYGDVE------VTNREIIEFQEKIGVDIGTI 120 (630)
T ss_pred EE-------EEECCEE------ECHHHHHHHHHHHCCCEEEE
T ss_conf 77-------7737662------06999999999857998887
No 357
>pfam10100 DUF2338 Uncharacterized protein conserved in bacteria (DUF2338). Members of this family of hypothetical bacterial proteins have no known function.
Probab=36.75 E-value=29 Score=14.77 Aligned_cols=111 Identities=18% Similarity=0.197 Sum_probs=57.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHH----------------------HHHHHHHHCCCCCCE
Q ss_conf 8688877689689999863210365----32898899999999----------------------999999968899857
Q gi|254780153|r 15 FFSSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKA----------------------IQLTRKVLEVPENYR 68 (391)
Q Consensus 15 ~F~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~----------------------~~~l~~l~~~p~~y~ 68 (391)
-+|.||+.+.-...+.+-....+|+ |-||..|.+-++.. ..-.+.+-.+-++|.
T Consensus 6 i~GtGPvaIQLAv~~~~~~~~~vgi~~R~S~rs~~f~e~l~~~~~~~~~~vqn~~h~~~~G~~~id~~~~~~~~i~g~Wd 85 (429)
T pfam10100 6 ILGTGPVAIQLAVDLKLHGDARLGIAGRPSTRSKRLFEALARTDTLFLVGTQNEQHQQLEGKCTIDCFIKDYATIVGDWD 85 (429)
T ss_pred EECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCEEHHHHHCCHHHHCCCCC
T ss_conf 96377799999999985237455453275355799999997377679861022456764471562454137988515133
Q ss_pred EEEECCCCHHHHHHHHHH----CCCCCCEEEEEECCHHHHHH-HHHHHCCCCCEEEE--ECCCCC
Q ss_conf 999748734899987532----05789707997073688888-76532387630674--057776
Q gi|254780153|r 69 IAIVPASDTGAVEMALWS----LLGYRGVDVLAWESFGLGWM-SDIRQLSLQDVREF--TAPYGS 126 (391)
Q Consensus 69 v~~l~GsgT~~~ea~~~n----l~~~~~~~~~~~g~~~~r~~-~~~~~~~~~~~~~~--~~~~g~ 126 (391)
.++|...+ -+--.++.+ .+..=+.+++++-.||.... +.+....+.+++++ +.-+|.
T Consensus 86 tlILavta-DaY~~VL~qi~~~~L~~vk~iILvSPt~GS~~lv~~~l~~~~~~~eVISfStY~gd 149 (429)
T pfam10100 86 TLILAVTA-DAYYDVLQQIPWETLKRVKCVILISPTFGSNLLVQNFLNALNKDAEVISFSTYYGD 149 (429)
T ss_pred EEEEEEEH-HHHHHHHHCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 79999521-87899997079988704777999766644079999999855998169985300364
No 358
>TIGR00462 genX lysyl-tRNA synthetase homolog GenX; InterPro: IPR004525 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases . This entry represents lysyl-tRNA synthetases from bacteria, as well as other related proteins. Escherichia coli, Haemophilus influenzae, and Aquifex aeolicus each have a protein closely homologous to the C-terminal region of lysyl-tRNA synthetase (LysS). Multiple sequence alignment of these proteins with the homologous regions of collected LysS proteins shows that these proteins form a distinct set rather than just similar truncations of LysS, so they appear to be orthologous. The protein is termed PoxA or GenX after its designation in E. coli. Its function is unknown.; GO: 0000166 nucleotide binding, 0004824 lysine-tRNA ligase activity, 0005524 ATP binding, 0006412 translation, 0006430 lysyl-tRNA aminoacylation, 0005737 cytoplasm.
Probab=34.16 E-value=31 Score=14.51 Aligned_cols=23 Identities=26% Similarity=0.260 Sum_probs=12.9
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98899999999999999968899
Q gi|254780153|r 43 CVLGKERINKAIQLTRKVLEVPE 65 (391)
Q Consensus 43 s~~f~~i~~~~~~~l~~l~~~p~ 65 (391)
..++..+++|+...|.++|+.|.
T Consensus 126 ~~d~~~Li~E~~~LL~~~ld~~~ 148 (330)
T TIGR00462 126 HYDMLRLINEVDDLLQQLLDCPE 148 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 02389999999999999728863
No 359
>TIGR00763 lon ATP-dependent protease La; InterPro: IPR004815 Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes . They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence . Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases . Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base . The geometric orientations of the catalytic residues are similar between families, despite different protein folds . The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) , . Peptidases are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. This signature defines the bacterial and eukaryotic lon proteases, which are ATP-dependent serine peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SF). This family of sequences does not include the archaeal lon homologs, IPR004663 from INTERPRO. In the eukaryotes the majority of the proteins are located in the mitochondrial matrix , . In yeast, Pim1, is located in the mitochondrial matrix, is required for mitochondrial function, is constitutively expressed but is increased after thermal stress, suggesting that Pim1 may play a role in the heat shock response .; GO: 0004176 ATP-dependent peptidase activity, 0005524 ATP binding, 0006510 ATP-dependent proteolysis.
Probab=33.50 E-value=14 Score=16.75 Aligned_cols=86 Identities=16% Similarity=0.123 Sum_probs=53.5
Q ss_pred HHHHHHHHHHH-----C--------CC--CCCCCHHHHHHHHHHH----HHHH-HHHCCCCC-CEEE--EECCCCHHHHH
Q ss_conf 68999986321-----0--------36--5328988999999999----9999-99688998-5799--97487348999
Q gi|254780153|r 25 PGWSLGILEGA-----L--------LG--RSHRCVLGKERINKAI----QLTR-KVLEVPEN-YRIA--IVPASDTGAVE 81 (391)
Q Consensus 25 p~~v~~~~~~~-----~--------l~--~sHRs~~f~~i~~~~~----~~l~-~l~~~p~~-y~v~--~l~GsgT~~~e 81 (391)
|+.++++|... + |+ .|||+.++..|++=.= .... -++++|=| ..|+ |+. +| -.++
T Consensus 504 PGriiQ~lk~~~t~NPl~LlDEIDK~~~~~~~~GDPaSALLEvLDPEQN~~F~DHYldvp~DLS~V~CyFi~-TA-N~~d 581 (941)
T TIGR00763 504 PGRIIQGLKKAKTKNPLILLDEIDKIGLKSSFRGDPASALLEVLDPEQNNAFSDHYLDVPFDLSKVLCYFIA-TA-NSID 581 (941)
T ss_pred HHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHEEE-CC-CCCC
T ss_conf 257899987604158806862022001678865563788864128643604255300234004200210002-44-7576
Q ss_pred HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCC
Q ss_conf 87532057897079970736888887653238
Q gi|254780153|r 82 MALWSLLGYRGVDVLAWESFGLGWMSDIRQLS 113 (391)
Q Consensus 82 a~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~ 113 (391)
.+|.=|+ +.-.++-++|+-.+.=..++.++-
T Consensus 582 ~IP~PLL-DRMEvI~lsGY~~~EK~~IA~~yL 612 (941)
T TIGR00763 582 TIPRPLL-DRMEVIELSGYTEEEKLEIAKKYL 612 (941)
T ss_pred CCCCCCC-CCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 7772213-740245238887678999998547
No 360
>pfam01209 Ubie_methyltran ubiE/COQ5 methyltransferase family.
Probab=33.48 E-value=32 Score=14.44 Aligned_cols=55 Identities=18% Similarity=0.128 Sum_probs=30.5
Q ss_pred HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 9999999688998579997487348999875320578970799707368888876532
Q gi|254780153|r 54 IQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQ 111 (391)
Q Consensus 54 ~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~ 111 (391)
++.+.+.++.+.+..|+= -|+|||-+...+.....+...++.+ .++....+.+.+
T Consensus 36 R~~~v~~~~~~~g~~vLD-l~cGTG~~~~~l~~~~~~~~~v~gv--D~S~~ML~~a~~ 90 (233)
T pfam01209 36 KDFTMKCMGVKRGNKFLD-VAGGTGDWTFGLSDSAGSSGKVVGL--DINENMLKEGEK 90 (233)
T ss_pred HHHHHHHCCCCCCCEEEE-ECCCCCHHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHH
T ss_conf 999998618999998998-2540588999999984999749999--699999999999
No 361
>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=33.44 E-value=32 Score=14.44 Aligned_cols=206 Identities=17% Similarity=0.083 Sum_probs=120.7
Q ss_pred CEEEEEEECCCC---EEECCEE------EECCCCCCEEEEEECCHHHHC--------CCCCCCC--EEEEECCHHCCCC-
Q ss_conf 579974202420---2203203------502568614886401101102--------5455685--7999700120017-
Q gi|254780153|r 138 DVVFVWNGTTSG---VCVPDVG------FIPESREGLVICDATSAVFAR--------HIDFNKL--DVVTFSAQKVLGG- 197 (391)
Q Consensus 138 ~v~~~h~ETstG---v~~~~~~------~~~~~~~~llivD~vSs~g~~--------p~d~~~i--Dv~~a~sQK~l~~- 197 (391)
.|+.+=.|=..| -..|..+ ..|+++++.+|.|=|++=.++ .++.+++ |.+ +.-|.|..
T Consensus 200 ~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQtGFARTG~~FA~eH~~~dGl~PDLi--t~aKslA~G 277 (427)
T TIGR00700 200 NVAAVVIEPVQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQTGFARTGKLFAIEHYDDDGLKPDLI--TVAKSLADG 277 (427)
T ss_pred CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCEEEEECCCCCCCCCHH--HHHHHHHCC
T ss_conf 043789732247887333858899999997543875899725456800002112541006788875188--786677356
Q ss_pred CCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 66515445677888765411445778312320011232103347864466644889999999986201031899999999
Q gi|254780153|r 198 EAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCN 277 (391)
Q Consensus 198 ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~ 277 (391)
-| ||-|+-+-+. +. +-.-..-|.|+.=-|+ .+.|...+|+.|+++ || .+|.+
T Consensus 278 lP-LSgV~GrAei------md----------------ApapGgLGGTyaGnPl-acAAAlAvl~iIe~e-gL---~ERa~ 329 (427)
T TIGR00700 278 LP-LSGVVGRAEI------MD----------------APAPGGLGGTYAGNPL-ACAAALAVLDIIEEE-GL---IERAE 329 (427)
T ss_pred CC-CCHHHCCHHH------CC----------------CCCCCCCCCCCCCCHH-HHHHHHHHHHHHCCC-CH---HHHHH
T ss_conf 86-2111044121------16----------------8888888775568879-999999999863113-12---47899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEE
Q ss_conf 77999999987479716766882003653178982473101137345678889999988862828726655676750568
Q gi|254780153|r 278 ANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRV 357 (391)
Q Consensus 278 ~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RI 357 (391)
+..+.+.|.+-...-..+++.+-..+..|.-+=.++||...+-+ ......+.++-..+|.++-+-|- -|+.||.
T Consensus 330 qig~~~~d~l~~~k~~~p~IgdvRglGaMiAvE~vkdp~T~EPd----a~~a~~ia~~A~a~GlllLTcG~--~GNiIRf 403 (427)
T TIGR00700 330 QIGKLVKDKLIELKEEVPAIGDVRGLGAMIAVELVKDPDTTEPD----AALAEKIAAAALAAGLLLLTCGI--YGNIIRF 403 (427)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCC----HHHHHHHHHHHHHCCHHHHHCCH--HCCHHHH
T ss_conf 98788988888887606721112026335788865488788831----79999999999756822123030--1155543
Q ss_pred ECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 6158889999999999999999
Q gi|254780153|r 358 WVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 358 g~~g~i~~~dv~~L~~aLe~~~ 379 (391)
=.==.|.++-++.-++-|+..+
T Consensus 404 L~PLtI~D~ll~egl~Il~a~L 425 (427)
T TIGR00700 404 LTPLTISDELLDEGLDILEAAL 425 (427)
T ss_pred CCCCCCCHHHHHHHHHHHHHHH
T ss_conf 4886546788988999999985
No 362
>TIGR00954 3a01203 Peroxysomal long chain fatty acyl transporter; InterPro: IPR005283 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain . The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyze ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarize the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site , , . The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis , , , , , . Proteins known to belong to this family are classified in several functional subfamilies depending on the substrate used (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). The members of this family are integral membrane proteins and they are involved in the import of activated long-chain fatty acids from the cytosol to the peroxisomal matrix. ; GO: 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane.
Probab=33.40 E-value=17 Score=16.23 Aligned_cols=27 Identities=0% Similarity=-0.253 Sum_probs=15.6
Q ss_pred CCCEEEEECCHHCCC-----CCCCCEEEEECH
Q ss_conf 685799970012001-----766515445677
Q gi|254780153|r 182 NKLDVVTFSAQKVLG-----GEAGFGIIILSP 208 (391)
Q Consensus 182 ~~iDv~~a~sQK~l~-----~ppGl~~v~~s~ 208 (391)
++-.+++.|.+=|=- .-+||.++...+
T Consensus 555 sG~~lLi~GPNGCGKSSLFRiLGeLWP~~g~~ 586 (788)
T TIGR00954 555 SGNHLLICGPNGCGKSSLFRILGELWPVYGKN 586 (788)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 88766876889986478999986430235789
No 363
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes.
Probab=32.97 E-value=33 Score=14.39 Aligned_cols=37 Identities=11% Similarity=0.095 Sum_probs=25.5
Q ss_pred CCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCC
Q ss_conf 56861488640110110254556857999700120017
Q gi|254780153|r 160 ESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGG 197 (391)
Q Consensus 160 ~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ 197 (391)
+..|.+++.|.++.. .-|++..+.+..+.+.++....
T Consensus 95 KPGG~lviaD~~~n~-~~~i~~~~~~~~~~t~~eW~~l 131 (224)
T smart00828 95 KDGGHLVLADFIANL-LSAIEHEETTSYLVTREEWAEL 131 (224)
T ss_pred CCCEEEEEEEEECCC-CCCCCCCCCCCCCCCHHHHHHH
T ss_conf 798499999853378-8877787630024789999999
No 364
>pfam00996 GDI GDP dissociation inhibitor.
Probab=32.86 E-value=33 Score=14.38 Aligned_cols=41 Identities=24% Similarity=0.229 Sum_probs=24.0
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHCCC-CCCEEEE--EECCHHHHHHH
Q ss_conf 99857999748734899987532057-8970799--70736888887
Q gi|254780153|r 64 PENYRIAIVPASDTGAVEMALWSLLG-YRGVDVL--AWESFGLGWMS 107 (391)
Q Consensus 64 p~~y~v~~l~GsgT~~~ea~~~nl~~-~~~~~~~--~~g~~~~r~~~ 107 (391)
|+.|.|+++ |||--|.++.-+++ .|.+++- .|.++|+.|+.
T Consensus 2 ~eeyDVIIl---GTGL~EsILaaaLS~~GKkVLHiDrN~yYGg~~AS 45 (439)
T pfam00996 2 DEEYDVIVL---GTGLKECILSGLLSVDGKKVLHIDRNDYYGGESAS 45 (439)
T ss_pred CCCEEEEEE---CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
T ss_conf 985029997---99879999999997369989997799877863015
No 365
>TIGR02478 6PF1K_euk 6-phosphofructokinase; InterPro: IPR009161 Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (2.7.1.11 from EC) in which two tandem copies of the phosphofructokinase are found . Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal). Phosphofructokinase (PFK) catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate, which then enters the Embden-Meyerhof pathway. PFK is a key regulatory enzyme in glycolysis. For additional information please see , , .; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005737 cytoplasm.
Probab=31.87 E-value=34 Score=14.28 Aligned_cols=160 Identities=18% Similarity=0.177 Sum_probs=83.7
Q ss_pred CCCHHHHHHHH---HHHHHHHHHHCCC--C---CCEEEEECCCC-HHHHHHHHHHCC----CCCCEEEEEECCHHHHHHH
Q ss_conf 28988999999---9999999996889--9---85799974873-489998753205----7897079970736888887
Q gi|254780153|r 41 HRCVLGKERIN---KAIQLTRKVLEVP--E---NYRIAIVPASD-TGAVEMALWSLL----GYRGVDVLAWESFGLGWMS 107 (391)
Q Consensus 41 HRs~~f~~i~~---~~~~~l~~l~~~p--~---~y~v~~l~Gsg-T~~~ea~~~nl~----~~~~~~~~~~g~~~~r~~~ 107 (391)
=|+.+|.+-++ .+-.-.+.=...| + +|+|.+++=|| .++|.++++.++ .+|..++-+.++|.+-...
T Consensus 369 LRg~eF~~~~~~~~~~s~~~~~~~~~~~~~~r~~~R~AIihvGAPA~GMNaA~R~avr~~~~~Gh~v~aI~nGf~GL~~~ 448 (777)
T TIGR02478 369 LRGREFVENLATFLELSKPDQDKKLVPSKADRLNLRVAIIHVGAPAGGMNAATRAAVRYALARGHTVIAIHNGFSGLARG 448 (777)
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCC
T ss_conf 35723577544477620337888677754356742079996488853023999999999850698799981684100228
Q ss_pred H-------HHHCCCCCEEEEECCCCCCC-CHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEECCHHHHC-C
Q ss_conf 6-------53238763067405777657-8676785565799742024202203203502568614886401101102-5
Q gi|254780153|r 108 D-------IRQLSLQDVREFTAPYGSLP-DFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFAR-H 178 (391)
Q Consensus 108 ~-------~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~vSs~g~~-p 178 (391)
+ +.++...||.-.....|... .--++|...++- ++... +-.+.=+.|+||=+=.+|-+. .
T Consensus 449 ~DDtPicsvrEL~W~dV~gW~~~GGS~lGTnR~lP~~~d~~----~iA~~-------f~~~kiDgL~IIGGFEAf~al~q 517 (777)
T TIGR02478 449 DDDTPICSVRELTWSDVEGWVGEGGSELGTNRELPNGKDLG----EIAYK-------FQKHKIDGLLIIGGFEAFEALLQ 517 (777)
T ss_pred CCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHH----HHHHH-------HHHCCCCEEEEECCHHHHHHHHH
T ss_conf 88974331222023444233428876216778977865389----99999-------98609887999760368899999
Q ss_pred CCC-------CCCEEEE--ECCHHCCCCCCCCEEEEECHHHHHHH
Q ss_conf 455-------6857999--70012001766515445677888765
Q gi|254780153|r 179 IDF-------NKLDVVT--FSAQKVLGGEAGFGIIILSPASVERL 214 (391)
Q Consensus 179 ~d~-------~~iDv~~--a~sQK~l~~ppGl~~v~~s~~al~~~ 214 (391)
++. =.|=++. |.--=|. ||.-+=+-++-||..+
T Consensus 518 L~~aR~~YP~F~IPmv~iPATISNNV---PGTe~SLG~DTaLN~i 559 (777)
T TIGR02478 518 LEQAREKYPAFRIPMVVIPATISNNV---PGTEYSLGSDTALNEI 559 (777)
T ss_pred HHHHHHHCCCCCCCEEEECCEEECCC---CCCCCHHHHHHHHHHH
T ss_conf 99998618855788578666010778---7244302201577789
No 366
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=31.34 E-value=35 Score=14.22 Aligned_cols=38 Identities=11% Similarity=0.166 Sum_probs=27.5
Q ss_pred HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 9996889985799974873489998753205789707997
Q gi|254780153|r 58 RKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 58 ~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
.++|++.+ ++++++|+++|-=-++...|.+.|..+++.
T Consensus 2 ~~~~~L~g--K~alVTG~~~GIG~aiA~~la~~Ga~Vvi~ 39 (254)
T PRK08085 2 NDLFSLAG--KNILITGSAQGIGFLLATGLAEYGAEIIIN 39 (254)
T ss_pred CCCCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 96728999--989996856789999999999869999999
No 367
>PRK08317 hypothetical protein; Provisional
Probab=31.32 E-value=35 Score=14.22 Aligned_cols=47 Identities=21% Similarity=0.101 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 999999999996889985799974873489998753205789707997
Q gi|254780153|r 50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 50 ~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
+..-++.+-+.+++..+.+|+=+ |.|||.+...+...++++..++.+
T Consensus 4 ~~~~r~~~l~~L~l~pG~~vLDi-GcG~G~~~~~la~~~g~~~~v~gv 50 (241)
T PRK08317 4 FRRYRARTFELLAVQPGERVLDV-GCGPGNDLRELADRVGPEGRVVGI 50 (241)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEE-CCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 68999999973699997999996-641749999999974999789999
No 368
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=29.62 E-value=20 Score=15.72 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECC-CCHH---HHHHHHHHCCC
Q ss_conf 9999999999968899857999748-7348---99987532057
Q gi|254780153|r 50 INKAIQLTRKVLEVPENYRIAIVPA-SDTG---AVEMALWSLLG 89 (391)
Q Consensus 50 ~~~~~~~l~~l~~~p~~y~v~~l~G-sgT~---~~ea~~~nl~~ 89 (391)
.++++..+..++|+... +++..+| +|.| -+|+++--...
T Consensus 140 pe~v~~eIe~~iGld~~-~ai~~SAKtG~Gi~e~LEaIv~~vPp 182 (598)
T TIGR01393 140 PERVKKEIEEVIGLDAS-EAILASAKTGIGIEEILEAIVKRVPP 182 (598)
T ss_pred HHHHHHHHHHHCCCCCC-CCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 58999987654188964-30387503678889998897101810
No 369
>KOG1201 consensus
Probab=29.56 E-value=37 Score=14.03 Aligned_cols=162 Identities=16% Similarity=0.139 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHCCCC---CCEEEEECCCCHHHHHHHHHHCCCCCCEEE-EEECCHH-HHHHHHHHHCCCCCEEEEE
Q ss_conf 9999999999999968899---857999748734899987532057897079-9707368-8888765323876306740
Q gi|254780153|r 47 KERINKAIQLTRKVLEVPE---NYRIAIVPASDTGAVEMALWSLLGYRGVDV-LAWESFG-LGWMSDIRQLSLQDVREFT 121 (391)
Q Consensus 47 ~~i~~~~~~~l~~l~~~p~---~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~-~~~g~~~-~r~~~~~~~~~~~~~~~~~ 121 (391)
..++....+.+..++.-|. .-++++++|||+|-=-+++..+.+.+.+++ ...+..+ ....+++++.+ .+..+.
T Consensus 15 ~~~~~~~~s~~~~~l~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g--~~~~y~ 92 (300)
T KOG1201 15 LLLLALLESLIKLLLPKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG--EAKAYT 92 (300)
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCC--CEEEEE
T ss_conf 999999999998755543344069889996898607899999999707848999556512399999998448--525899
Q ss_pred CCCCCCCCHHH----C-CCCCCEEEEEEECCCCEEEC--C----EEEECC--CCCCEEEEEECCHHHHCCCCCCCCEEEE
Q ss_conf 57776578676----7-85565799742024202203--2----035025--6861488640110110254556857999
Q gi|254780153|r 122 APYGSLPDFSK----V-DFDRDVVFVWNGTTSGVCVP--D----VGFIPE--SREGLVICDATSAVFARHIDFNKLDVVT 188 (391)
Q Consensus 122 ~~~g~~~~~~~----~-~~~~~v~~~h~ETstGv~~~--~----~~~~~~--~~~~llivD~vSs~g~~p~d~~~iDv~~ 188 (391)
.+-....+... + ++..++.+.=|. -|+... . .+.+.+ +-+.+--...++.|.=.-++-++--++-
T Consensus 93 cdis~~eei~~~a~~Vk~e~G~V~ILVNN--AGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~ 170 (300)
T KOG1201 93 CDISDREEIYRLAKKVKKEVGDVDILVNN--AGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVT 170 (300)
T ss_pred ECCCCHHHHHHHHHHHHHHCCCCEEEEEC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 55898899999999999861995499836--6424488756799899999998766899999998738887457963998
Q ss_pred ECCHHCCCCCCCCEEEEECHHHHH
Q ss_conf 700120017665154456778887
Q gi|254780153|r 189 FSAQKVLGGEAGFGIIILSPASVE 212 (391)
Q Consensus 189 a~sQK~l~~ppGl~~v~~s~~al~ 212 (391)
-+|-=++.++||++.=+.|+-|..
T Consensus 171 IaS~aG~~g~~gl~~YcaSK~a~v 194 (300)
T KOG1201 171 IASVAGLFGPAGLADYCASKFAAV 194 (300)
T ss_pred EHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 355331357765323565189999
No 370
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=28.31 E-value=39 Score=13.89 Aligned_cols=63 Identities=6% Similarity=-0.003 Sum_probs=37.9
Q ss_pred HHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE--CCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 999968899857999748734899987532057897079970--736888887653238763067405
Q gi|254780153|r 57 TRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAW--ESFGLGWMSDIRQLSLQDVREFTA 122 (391)
Q Consensus 57 l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~--g~~~~r~~~~~~~~~~~~~~~~~~ 122 (391)
+.++|++.+ ++++++|++.+-=.++..-|.+.|-.+++.. -.-.++..+++.+.++ .+..+..
T Consensus 2 m~~lf~L~g--KvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~-~~~~~~~ 66 (278)
T PRK08277 2 MNNLFSLKG--KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVEEIKANGG-EAIALKA 66 (278)
T ss_pred CCCCCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCC-EEEEEEC
T ss_conf 400638899--9899958674899999999998799899997988999999999984599-0999982
No 371
>TIGR00928 purB adenylosuccinate lyase; InterPro: IPR004769 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes. Adenylosuccinate lyase is involved in purine ribonucleotide biosynthesis.; GO: 0004018 adenylosuccinate lyase activity, 0009152 purine ribonucleotide biosynthetic process.
Probab=28.03 E-value=33 Score=14.38 Aligned_cols=46 Identities=17% Similarity=0.194 Sum_probs=35.6
Q ss_pred HCCCCCCC--------CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 10365328--------988999999999999999688998579997487348999875
Q gi|254780153|r 35 ALLGRSHR--------CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMAL 84 (391)
Q Consensus 35 ~~l~~sHR--------s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~ 84 (391)
.|+|++|= +..|---.+|++.++++|-++++...+ |+.+|++-+..
T Consensus 156 ~m~GRTHGq~A~PtT~G~~~A~w~~E~~R~~~rL~~~~~~~~v----g~i~Ga~GT~a 209 (469)
T TIGR00928 156 VMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLKQAKERIKV----GGISGAVGTYA 209 (469)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCCCCHHH
T ss_conf 8841357824344869999999999999999999988861665----74225421476
No 372
>TIGR02442 Cob-chelat-sub cobaltochelatase subunit; InterPro: IPR012804 Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in Salmonella typhimurium) , . The corresponding cobalt chelatases are not homologous. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (IPR010388 from INTERPRO). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis, (IPR011953 from INTERPRO, IPR006537 from INTERPRO, IPR006538 from INTERPRO) . The two pathways differ in the point of cobalt insertion during corrin ring formation . There are apparently a number of variations on these two pathways, where the major differences seem to be concerned with the process of ring contraction . Cobaltochelatase shows similarities with magnesium chelatase, which is also a complex ATP-dependent enzyme made up of two separable components. However, unlike the situation in cobaltochelatase, one of these two components is membrane bound in magnesium chelatase . .
Probab=27.82 E-value=25 Score=15.12 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=24.3
Q ss_pred CEEEEEECCHHHHC-CCCC----------------CCCEEEEE-CCHHCCCCCCCCEEEEE
Q ss_conf 14886401101102-5455----------------68579997-00120017665154456
Q gi|254780153|r 164 GLVICDATSAVFAR-HIDF----------------NKLDVVTF-SAQKVLGGEAGFGIIIL 206 (391)
Q Consensus 164 ~llivD~vSs~g~~-p~d~----------------~~iDv~~a-~sQK~l~~ppGl~~v~~ 206 (391)
++|||||+.|++++ .|.. +++.+|-| +.+=.+.+||=-++-.+
T Consensus 511 viFvVDASGSM~ar~RM~~~KGavLsLL~DAYq~RDkValI~FrG~~AevlLPPT~sv~~A 571 (688)
T TIGR02442 511 VIFVVDASGSMAARGRMAAAKGAVLSLLRDAYQKRDKVALITFRGEEAEVLLPPTSSVELA 571 (688)
T ss_pred EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCHHHHH
T ss_conf 2235335320442357899899999988888862776888623673435765878848999
No 373
>pfam06070 Herpes_UL32 Herpesvirus large structural phosphoprotein UL32. The large phosphorylated protein (UL32-like) of herpes viruses is the polypeptide most frequently reactive in immuno-blotting analyses with antisera when compared with other viral proteins.
Probab=27.70 E-value=40 Score=13.83 Aligned_cols=20 Identities=10% Similarity=0.076 Sum_probs=6.7
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q ss_conf 28988999999999999999
Q gi|254780153|r 41 HRCVLGKERINKAIQLTRKV 60 (391)
Q Consensus 41 HRs~~f~~i~~~~~~~l~~l 60 (391)
||..-|.+++.|=..-++..
T Consensus 255 ~sv~tlL~~L~EDf~I~~~s 274 (777)
T pfam06070 255 TSVDTLLERLEEDFDIYEDS 274 (777)
T ss_pred CHHHHHHHHHHHHHHHHHHH
T ss_conf 30999999999889999877
No 374
>TIGR02081 metW methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells . .
Probab=27.67 E-value=25 Score=15.17 Aligned_cols=92 Identities=12% Similarity=-0.014 Sum_probs=38.4
Q ss_pred HHHHHHCC-CCCCEEEEECCCCHHHHHHHHHHCC---C-CCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
Q ss_conf 99999688-9985799974873489998753205---7-89707997073688888765323876306740577765786
Q gi|254780153|r 56 LTRKVLEV-PENYRIAIVPASDTGAVEMALWSLL---G-YRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDF 130 (391)
Q Consensus 56 ~l~~l~~~-p~~y~v~~l~GsgT~~~ea~~~nl~---~-~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~ 130 (391)
.++.+++. |...+|+=+ |.|-|..=+++.+=- + |...+-+-.=+-.++-..+|.++| .+|+....+.| +
T Consensus 3 Dl~~I~~~Ip~GSRVLDL-GCGdG~LL~~L~d~k~v~GPPttehRL~G~Eid~~~v~Ac~~RG-v~VIq~Dld~G----L 76 (205)
T TIGR02081 3 DLELILDLIPPGSRVLDL-GCGDGELLALLRDEKQVRGPPTTEHRLYGIEIDQDGVLACVARG-VSVIQGDLDEG----L 76 (205)
T ss_pred HHHHHHHHCCCCCEEEEE-CCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHCC-CCEECCCCCCC----C
T ss_conf 578898616888736410-16887899999974378988871200010234544599998625-20130060034----0
Q ss_pred HHCCCCCCEEEEEEECCCCEEEC
Q ss_conf 76785565799742024202203
Q gi|254780153|r 131 SKVDFDRDVVFVWNGTTSGVCVP 153 (391)
Q Consensus 131 ~~~~~~~~v~~~h~ETstGv~~~ 153 (391)
+..+...-=.++-+=|-..|.||
T Consensus 77 ~~F~D~~FD~ViLsQTLQa~~Np 99 (205)
T TIGR02081 77 EAFPDKSFDYVILSQTLQATRNP 99 (205)
T ss_pred CCCCCCCCCEEEECHHHHHHHCH
T ss_conf 11678876625421356642256
No 375
>PRK10294 6-phosphofructokinase 2; Provisional
Probab=27.58 E-value=41 Score=13.81 Aligned_cols=48 Identities=15% Similarity=0.046 Sum_probs=28.1
Q ss_pred CCCCHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 487348999875320578970799-7073688888765323876306740
Q gi|254780153|r 73 PASDTGAVEMALWSLLGYRGVDVL-AWESFGLGWMSDIRQLSLQDVREFT 121 (391)
Q Consensus 73 ~GsgT~~~ea~~~nl~~~~~~~~~-~~g~~~~r~~~~~~~~~~~~~~~~~ 121 (391)
.-||-|.+-|++...++-....+. +.|..|....+.+++ .+.++..+.
T Consensus 36 ~pGGKG~NvA~al~~LG~~~~~ig~vGg~~G~~l~~~L~~-~gv~~~~v~ 84 (309)
T PRK10294 36 EPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLAD-ENVPVATVE 84 (309)
T ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH-CCCCEEEEE
T ss_conf 3886289999999986998699999148768999999998-699646999
No 376
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=27.40 E-value=41 Score=13.79 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=24.6
Q ss_pred HHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 996889985799974873489998753205789707997
Q gi|254780153|r 59 KVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 59 ~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
++|++.+ ++++++|++.|-=.++...|.+.|-.+++.
T Consensus 9 ~~f~L~g--KvalVTGas~GIG~aiA~~la~~Ga~Vvi~ 45 (258)
T PRK06935 9 DFFSLKG--KVAIVTGGNTGLGQGYAVALAKAGADIIIT 45 (258)
T ss_pred HHCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 4319999--989994857589999999999879999997
No 377
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=26.96 E-value=42 Score=13.74 Aligned_cols=110 Identities=15% Similarity=0.214 Sum_probs=49.2
Q ss_pred HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC
Q ss_conf 99999688998579997487348999875320578970799707368888876532387630674057776578676785
Q gi|254780153|r 56 LTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF 135 (391)
Q Consensus 56 ~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 135 (391)
..+++|+--++-+++++-.|+.+ ..++.+|.+.+-..+.+.+---.|..+.+.++++..+.... +. ++.+.-.
T Consensus 2 la~~~~~~l~~~~vlVIGaG~~~--~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~---~l~~~l~ 74 (134)
T pfam01488 2 LAKKIFGDLKGKKVLLIGAGEMA--RLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALP--LD---ELEELLA 74 (134)
T ss_pred HHHHHHCCCCCCEEEEECCCHHH--HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEE--CH---HHHHHHH
T ss_conf 27776388148989999960999--99999999759988999547578999999984997258985--13---5441363
Q ss_pred CCCEEEEEEECCCCEEECCE--EEECCCCCCEEEEEECCHHHHCCCCC
Q ss_conf 56579974202420220320--35025686148864011011025455
Q gi|254780153|r 136 DRDVVFVWNGTTSGVCVPDV--GFIPESREGLVICDATSAVFARHIDF 181 (391)
Q Consensus 136 ~~~v~~~h~ETstGv~~~~~--~~~~~~~~~llivD~vSs~g~~p~d~ 181 (391)
..++.++ .|+.+ .+.. +.+......++++|. +.|=|.
T Consensus 75 ~~DivI~--aT~s~--~~ii~~~~~~~~~~~~~iiDL-----avPrnv 113 (134)
T pfam01488 75 EADIVIS--ATSAP--TPIITKEMVEEALKGLLFVDI-----AVPRDI 113 (134)
T ss_pred HCCEEEE--ECCCC--CCEECHHHHHHCCCCEEEEEE-----CCCCCC
T ss_conf 1999999--25999--736489999744398599983-----478886
No 378
>TIGR00438 rrmJ ribosomal RNA large subunit methyltransferase J; InterPro: IPR004512 The ribosomal RNA large subunit methyltransferase J 2.1.1 from EC methylates the 23S rRNA. It specifically methylates the uridine in position 2552 of 23s rRNA in the 50S particle using S-adenosyl-L-methionine as a substrate. It was previously known as cell division protein ftsJ.; GO: 0016436 rRNA (uridine) methyltransferase activity, 0006364 rRNA processing.
Probab=26.52 E-value=42 Score=13.69 Aligned_cols=94 Identities=15% Similarity=0.131 Sum_probs=51.7
Q ss_pred HHCCCCCCEEE---EEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC--CCCCEEEEEEE-CCCCEEECCEEEE
Q ss_conf 32057897079---970736888887653238763067405777657867678--55657997420-2420220320350
Q gi|254780153|r 85 WSLLGYRGVDV---LAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD--FDRDVVFVWNG-TTSGVCVPDVGFI 158 (391)
Q Consensus 85 ~nl~~~~~~~~---~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~v~~~h~E-TstGv~~~~~~~~ 158 (391)
.+|+++|+.++ ..=|+|+|-....+..-|.. . +.|+..++ ....|.+...+ |-.-+++-+.+.+
T Consensus 27 ~kLik~G~~VlDLGAAPGGWsQva~~~~G~kG~V--i--------A~Dl~~~k~FP~~nv~fi~GDftdee~l~ki~~~~ 96 (192)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRV--I--------AVDLQPMKGFPIENVDFIRGDFTDEEVLNKILERV 96 (192)
T ss_pred CCCEECCCEEEECCCCCCCHHHHHHHHHCCCCEE--E--------EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHC
T ss_conf 5611078867865789873877887760685338--9--------98545578856466147544767878999999857
Q ss_pred CCC--CCCEEEEEECCHHHHCC-CCCCC-CEEEE
Q ss_conf 256--86148864011011025-45568-57999
Q gi|254780153|r 159 PES--REGLVICDATSAVFARH-IDFNK-LDVVT 188 (391)
Q Consensus 159 ~~~--~~~llivD~vSs~g~~p-~d~~~-iDv~~ 188 (391)
+.+ +--.+|-||+=++-+.+ +|.-. +|.+-
T Consensus 97 g~dekk~DVV~SDaaP~~SG~~~iDh~Rs~dLv~ 130 (192)
T TIGR00438 97 GDDEKKVDVVMSDAAPNISGIWDIDHLRSIDLVE 130 (192)
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 8987437789852688878987543443799999
No 379
>cd03062 TRX_Fd_Sucrase TRX-like [2Fe-2S] Ferredoxin (Fd) family, Sucrase subfamily; composed of proteins with similarity to a novel plant enzyme, isolated from potato, which contains a Fd-like domain and exhibits sucrolytic activity. The putative active site of the Fd-like domain of the enzyme contains two cysteines and two histidines for possible binding to iron-sulfur clusters, compared to four cysteines present in the active site of Fd.
Probab=25.40 E-value=44 Score=13.56 Aligned_cols=33 Identities=18% Similarity=-0.022 Sum_probs=24.5
Q ss_pred CCCCCCCCCCEEEE----E-CCCCCCHHHHHHHHHHHH
Q ss_conf 26655676750568----6-158889999999999999
Q gi|254780153|r 344 DIGSYRDAPLGLRV----W-VGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 344 ~~~~~r~~~~~~RI----g-~~g~i~~~dv~~L~~aLe 376 (391)
-+||||-+++.+=- | .||.++++|+..+++...
T Consensus 46 H~GGHrfA~n~i~~p~~~g~~yGrv~p~~~~~iv~~~~ 83 (97)
T cd03062 46 HVGGHKFAGNVIIYPKGDGIWYGRVTPEHVPPIVDRLI 83 (97)
T ss_pred CCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHH
T ss_conf 04676547537996178861788338899999999998
No 380
>pfam04127 DFP DNA / pantothenate metabolism flavoprotein. The DNA/pantothenate metabolism flavoprotein (EC:4.1.1.36) affects synthesis of DNA, and pantothenate metabolism.
Probab=24.44 E-value=46 Score=13.45 Aligned_cols=76 Identities=11% Similarity=0.113 Sum_probs=45.8
Q ss_pred EECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEECCHHHH
Q ss_conf 70736888887653238763067405777657867678556579974202420220320350256861488640110110
Q gi|254780153|r 97 AWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFA 176 (391)
Q Consensus 97 ~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~vSs~g~ 176 (391)
.+|.-|...++.+.++| .+|+.+..+....+ +....+-.++.+|+.-+..-....+....+.++.+-|+|++--
T Consensus 26 SSGkmG~alA~~~~~~G-a~V~li~g~~~~~~-----~~~~~~~~i~v~t~~em~~~~~~~~~~~~D~~I~aAAVsDf~p 99 (197)
T pfam04127 26 SSGKMGAAIAEEFLKRG-ADVTLIAGKGSLKP-----EPSGNLLIIPVETAEEMLNALKEIAPDLHDVFILAAAVSDFRP 99 (197)
T ss_pred CCHHHHHHHHHHHHHCC-CCEEEEECCCCCCC-----CCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
T ss_conf 95599999999999789-93899723565566-----8988818999689999999999747565779999100044554
Q ss_pred CC
Q ss_conf 25
Q gi|254780153|r 177 RH 178 (391)
Q Consensus 177 ~p 178 (391)
.+
T Consensus 100 ~~ 101 (197)
T pfam04127 100 KE 101 (197)
T ss_pred CC
T ss_conf 00
No 381
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=24.24 E-value=47 Score=13.42 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=29.7
Q ss_pred HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 999996889985799974873489998753205789707997
Q gi|254780153|r 56 LTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 56 ~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
.+.++|++.+ ++++++|++.|-=.++..-|.+.|-.+++.
T Consensus 3 ~i~~lf~L~g--KvalVTG~s~GIG~aia~~la~~Ga~V~i~ 42 (259)
T PRK08213 3 TVLELFDLTG--KTALVTGGSRGLGLQIAEALGEAGARVVLS 42 (259)
T ss_pred CHHHHHCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 7678739999--989994877689999999999869999999
No 382
>cd00411 Asparaginase Asparaginase (amidohydrolase): Asparaginases are tetrameric enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases, one highly specific for asparagine and localised to the periplasm, and a second (asparaginase- glutaminase) present in the cytosol that hydrolyzises both asparagine and glutamine with similar specificities.
Probab=24.19 E-value=47 Score=13.42 Aligned_cols=55 Identities=16% Similarity=-0.057 Sum_probs=39.0
Q ss_pred CCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 3289-889999999999999996889985799974873489998753205789707997073
Q gi|254780153|r 40 SHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391)
Q Consensus 40 sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391)
|+-+ .+..+|.+.+.+.+.. -+ -+++++|.-|.+..|..++|+=++++=++.+|.
T Consensus 58 s~m~p~~w~~ia~~i~~~~~~----~d--G~VVtHGTDTle~TA~~Ls~~l~~~kPVVlTGs 113 (323)
T cd00411 58 SDMTDEDWLKIAKDINELYDS----YD--GFVITHGTDTMEETAYFLSLTLENDKPVVLTGS 113 (323)
T ss_pred CCCCHHHHHHHHHHHHHHHHC----CC--EEEEECCCCHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 438999999999999998732----68--599955852499999999998247997899678
No 383
>pfam06745 KaiC KaiC. This family represents a conserved region within bacterial and archaeal proteins, most of which are hypothetical. More than one copy is sometimes found in each protein. This family includes KaiC, which is one of the Kai proteins among which direct protein-protein association may be a critical process in the generation of circadian rhythms in cyanobacteria.
Probab=24.00 E-value=47 Score=13.40 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=29.2
Q ss_pred HHHHHH--CCCCCCEEEEECCCCHH----HHHHHHHHCCCCCC-EEEEEECCHHHHHHHHHHHCC
Q ss_conf 999996--88998579997487348----99987532057897-079970736888887653238
Q gi|254780153|r 56 LTRKVL--EVPENYRIAIVPASDTG----AVEMALWSLLGYRG-VDVLAWESFGLGWMSDIRQLS 113 (391)
Q Consensus 56 ~l~~l~--~~p~~y~v~~l~GsgT~----~~ea~~~nl~~~~~-~~~~~~g~~~~r~~~~~~~~~ 113 (391)
.|=+++ ++|.+..+++.-.+|+| ++..+..++.+.|+ .+++....--+.....+...+
T Consensus 7 ~LD~~l~GGi~~gs~~LI~G~pGsGKT~la~qfl~~ga~~~ge~~lYis~ee~~~~l~~~~~~~g 71 (231)
T pfam06745 7 GLDEILKGGIPEGRVVLITGGPGTGKTIFGLQFLYNGALEYGEPGVYVTLEEPPEDLRENAKSFG 71 (231)
T ss_pred HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCC
T ss_conf 68863169982996999985897259999999999999865896899981379999999999829
No 384
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=23.85 E-value=47 Score=13.38 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=27.6
Q ss_pred HHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 99996889985799974873489998753205789707997
Q gi|254780153|r 57 TRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 57 l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
++++|++.+ ++++++|++.|-=-++...|.+.|-.+++.
T Consensus 2 m~~~f~l~g--K~alVTG~s~GIG~aiA~~la~~Ga~Vii~ 40 (265)
T PRK07097 2 MENMFSLKG--KIALITGASYGIGFAIAKAYAEAGATIVFN 40 (265)
T ss_pred CCCCCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 640419899--989995857689999999999869999999
No 385
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=23.66 E-value=48 Score=13.35 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=25.9
Q ss_pred HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 9996889985799974873489998753205789707997
Q gi|254780153|r 58 RKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 58 ~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
..+|++.+ ++++++|++.|-=.++...|.+.|-.+++.
T Consensus 2 ~~~~~L~g--KvalVTGgs~GIG~aia~~la~~Ga~V~~~ 39 (266)
T PRK06171 2 QTWLNLQG--KIIIVTGGSSGIGLAIVEELLAQGANVQMV 39 (266)
T ss_pred CCCCCCCC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 98638999--979994778789999999999879999999
No 386
>PRK13533 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Provisional
Probab=23.21 E-value=49 Score=13.30 Aligned_cols=66 Identities=12% Similarity=-0.026 Sum_probs=39.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-CCCC---CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf 7655646899888688877689689999863210-3653---28988999999999999999688998579997487348
Q gi|254780153|r 3 DMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGAL-LGRS---HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391)
Q Consensus 3 ~~~~~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~-l~~s---HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391)
..+-|..+|. .| |---.+.|+.+ +.++.++ |..+ ++.+- .++ +..+|+++++-+. .+|+-||+.
T Consensus 23 ~IeTP~fmPV-in--p~vk~i~p~el-~~~Ga~iIItNtY~l~~rpg-~~a---~~~GLH~fm~wdg----pImTDSGgF 90 (486)
T PRK13533 23 VVETPALFPV-IN--PHKQEIPPEEL-KEFGFEALITNSYIIYRSER-ERA---LEKGLHELLGFDG----VIMTDSGSY 90 (486)
T ss_pred EEECCCCCCC-CC--CCCCCCCHHHH-HHHCCCEEEEECCCEECCCC-HHH---HHCCHHHHCCCCC----CEEECCCCC
T ss_conf 6607853235-27--74571189999-98179899310110002760-667---7607087609999----737668876
Q ss_pred HH
Q ss_conf 99
Q gi|254780153|r 79 AV 80 (391)
Q Consensus 79 ~~ 80 (391)
|.
T Consensus 91 Qv 92 (486)
T PRK13533 91 QL 92 (486)
T ss_pred EE
T ss_conf 43
No 387
>TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component; InterPro: IPR010199 This entry describes an NADPH-dependent sulphite reductase flavoprotein subunit. Most members of the proteins of this entry are found in Cys biosynthesis gene clusters. The closest homologues are designated as subunits nitrate reductase.; GO: 0004783 sulfite reductase (NADPH) activity, 0000103 sulfate assimilation, 0019344 cysteine biosynthetic process.
Probab=22.89 E-value=35 Score=14.25 Aligned_cols=155 Identities=15% Similarity=0.038 Sum_probs=75.6
Q ss_pred EEECCHHHHCCCCCCCCEEEEECCHHCCCC-----------CCCCEEEEECHHHHHHHHHCCCCCCCCCHHH------CC
Q ss_conf 640110110254556857999700120017-----------6651544567788876541144577831232------00
Q gi|254780153|r 168 CDATSAVFARHIDFNKLDVVTFSAQKVLGG-----------EAGFGIIILSPASVERLEKYVPSWPLPKIFR------MV 230 (391)
Q Consensus 168 vD~vSs~g~~p~d~~~iDv~~a~sQK~l~~-----------ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~------~~ 230 (391)
.=+.|+|++..+..++.==||--.+++|=. =||.|+.=++-=.-+|.+.. ..+.+|-+|= -.
T Consensus 447 ~GgaS~fLA~rl~~gd~v~vyve~N~nFRLP~d~dtPiIMIGpGTGvAPFRaF~QeR~~~~-A~GknWLFFGnpHF~~DF 525 (628)
T TIGR01931 447 LGGASGFLAERLEEGDTVKVYVERNDNFRLPEDPDTPIIMIGPGTGVAPFRAFMQERAEDG-AKGKNWLFFGNPHFTTDF 525 (628)
T ss_pred ECCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCC-CCCCEEEEECCCCCCCCH
T ss_conf 4410577886508897677887517788888888978787368778000023578876348-998625321788713213
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 11232103347864466644889999999986201031899999999779999999874797167668820036531789
Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391)
Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391)
.|.-.|+..-|... +--+..| |-..+.-=-.+..|-+++++-||.||.. |...+|.
T Consensus 526 LYQ~EWQ~ylK~G~--------LT~~DlA--fSRDq~eKiYVQhrirE~g~ELw~Wlq~--GA~iYVC------------ 581 (628)
T TIGR01931 526 LYQVEWQKYLKKGV--------LTRMDLA--FSRDQAEKIYVQHRIREQGAELWQWLQE--GAHIYVC------------ 581 (628)
T ss_pred HHHHHHHHHHHCCC--------CEEECCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHC--CCEEEEE------------
T ss_conf 57899999983565--------3100230--0326565311556778748999999858--9748982------------
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 824731011373456788899999888628287266556767505686158889999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391)
.| +.++.|++=+.|.. | |...|.++.|.-++-++-|.
T Consensus 582 --GD----------A~~MAKDVh~aLL~--v---------------i~~~G~~d~E~A~eyL~~LR 618 (628)
T TIGR01931 582 --GD----------AKKMAKDVHQALLD--V---------------IAKEGGLDAEEAEEYLTDLR 618 (628)
T ss_pred --CC----------HHHHHHHHHHHHHH--H---------------HHHCCCCCHHHHHHHHHHHH
T ss_conf --68----------20103479999999--9---------------99618988889999999887
No 388
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; InterPro: IPR006009 The murG gene of Escherichia coli encodes the N-acetylglucosaminyltransferase, UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, responsible for the final step in the formation of the lipid-linked disaccharide-pentapeptide subunit of peptidoglycan. The enzyme is peripherally associated with the inner face of the cytoplasmic membrane. Therefore, the peptidoglycan subunit is completely assembled before it traverses the cytoplasmic membrane .; GO: 0050511 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity, 0019277 UDP-N-acetylgalactosamine biosynthetic process, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=22.43 E-value=50 Score=13.21 Aligned_cols=24 Identities=13% Similarity=0.124 Sum_probs=11.6
Q ss_pred EEEEECCCCHHHHH---HHHHHCCCCC
Q ss_conf 79997487348999---8753205789
Q gi|254780153|r 68 RIAIVPASDTGAVE---MALWSLLGYR 91 (391)
Q Consensus 68 ~v~~l~GsgT~~~e---a~~~nl~~~~ 91 (391)
..+++.|||||++= |+.-.|.+.+
T Consensus 6 ~~~~~~gGGTGG~fPAlA~a~~l~~~~ 32 (368)
T TIGR01133 6 KKVALAGGGTGGIFPALAVAEELIKRG 32 (368)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 289997278302689999999999748
No 389
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed
Probab=22.22 E-value=51 Score=13.18 Aligned_cols=27 Identities=11% Similarity=-0.080 Sum_probs=21.1
Q ss_pred EEEEECCC-CCCHHHHHHHHHHHHHHHH
Q ss_conf 05686158-8899999999999999999
Q gi|254780153|r 354 GLRVWVGV-TVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 354 ~~RIg~~g-~i~~~dv~~L~~aLe~~~~ 380 (391)
++|.|++| .++++|+....+-++.+.+
T Consensus 350 ~~~~Glggrd~~~~~~~~~~~~~~~~~~ 377 (395)
T PRK08367 350 DFILGLGGRDVTFKQLDEALAIAQKALE 377 (395)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 3770578876999999999999999984
No 390
>PRK09275 aspartate aminotransferase; Provisional
Probab=22.09 E-value=47 Score=13.40 Aligned_cols=317 Identities=15% Similarity=0.158 Sum_probs=130.9
Q ss_pred HHHHCC---CCCCEEEEECCCCHHHHHHHHHH-----CCCCCCEEEEEECCHHHHH-HHHHHHCCCCCEEEEEC-CCC--
Q ss_conf 999688---99857999748734899987532-----0578970799707368888-87653238763067405-777--
Q gi|254780153|r 58 RKVLEV---PENYRIAIVPASDTGAVEMALWS-----LLGYRGVDVLAWESFGLGW-MSDIRQLSLQDVREFTA-PYG-- 125 (391)
Q Consensus 58 ~~l~~~---p~~y~v~~l~GsgT~~~ea~~~n-----l~~~~~~~~~~~g~~~~r~-~~~~~~~~~~~~~~~~~-~~g-- 125 (391)
+++++- +.++. +|-+-|||.||-=+.-+ |+.+||++.+..--|.=.. .-+..++.. ++..+.+ +..
T Consensus 154 ~em~~~~~~~~~fd-lFatEGgTAAM~YiF~sL~~N~LL~~GDkIAi~~PIFTPYlEIP~L~~Y~l-~vV~i~a~~~~~W 231 (531)
T PRK09275 154 QEMCGNRPPPGEFD-LFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPDYDL-EVVHISADEKNEW 231 (531)
T ss_pred HHHCCCCCCCCCCC-EEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC-EEEEEECCCCCCC
T ss_conf 99628999988731-674167205799999999975887889878995677776301677666786-2899855654588
Q ss_pred CCCC--HHHC--CCCCCEEEEE--EECCCCEEECC----EEEECC-CCCCEEEEEECCHHHHCCCC--CCCC---EEEEE
Q ss_conf 6578--6767--8556579974--20242022032----035025-68614886401101102545--5685---79997
Q gi|254780153|r 126 SLPD--FSKV--DFDRDVVFVW--NGTTSGVCVPD----VGFIPE-SREGLVICDATSAVFARHID--FNKL---DVVTF 189 (391)
Q Consensus 126 ~~~~--~~~~--~~~~~v~~~h--~ETstGv~~~~----~~~~~~-~~~~llivD~vSs~g~~p~d--~~~i---Dv~~a 189 (391)
+.++ ++.+ +..+++++|- |=+|-.+.-.. .+++.. ..+..+|.|-|=.-.+..+. +..+ -+.+-
T Consensus 232 Qy~d~EleKL~DP~IKAlf~VNPsNP~S~~ls~e~l~~i~~IV~~~nPdLmIiTDDVYgTF~~~F~Sl~a~~P~NTi~VY 311 (531)
T PRK09275 232 QYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESLEKIADIVKEDRPDLMIITDDVYGTFVDDFRSLFAELPYNTLLVY 311 (531)
T ss_pred CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEHHHHCCCCEEEEE
T ss_conf 77989998744977118999899998666569999999999997429987999546532264564636564887547888
Q ss_pred CCHHCCCCCCC--CEEEEECHH-------------HHHHHHHCC-CCCCCCCHHHCCHHHHH-----HCCCCCCCCCCCC
Q ss_conf 00120017665--154456778-------------887654114-45778312320011232-----1033478644666
Q gi|254780153|r 190 SAQKVLGGEAG--FGIIILSPA-------------SVERLEKYV-PSWPLPKIFRMVKGGRV-----MEGLFCGETINTP 248 (391)
Q Consensus 190 ~sQK~l~~ppG--l~~v~~s~~-------------al~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~TP 248 (391)
|--|=+|. .| +|++.+.++ ..++..+.- .-...|.-+++-+-.-+ ..+..-| ..||
T Consensus 312 SfSKyFGa-TGWRLG~Ialh~~NvfD~~i~~Lp~~~k~~L~~RY~~lt~~P~~lkFIDRlVADSR~VALnHTAG--LStP 388 (531)
T PRK09275 312 SFSKYFGA-TGWRLGVIALHEDNVFDKLIAELPEEKKKELDKRYSSLTTEPEKLKFIDRLVADSRQVALNHTAG--LSTP 388 (531)
T ss_pred EEHHCCCC-CCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CCCH
T ss_conf 63100588-44110344541033077999866887899999877554688233540677652178888766037--8809
Q ss_pred CHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH---H
Q ss_conf 44889999999986201031--899999999779999999874797167668820036531789824731011373---4
Q gi|254780153|r 249 SLLCIEDYIDALLWLKKMGG--LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI---N 323 (391)
Q Consensus 249 ~v~~i~al~~~l~~i~~~gG--l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~---~ 323 (391)
- ....+|=.....+ .++. .+.+.+.++++-+.+|+.+. +. ...++. +..==+.+.+..-.-..... +
T Consensus 389 Q-QvqM~LFsl~~L~-d~~~~Yk~~~~~ii~~R~~~L~~~lg----~~-~~~~~~-~~~YYt~idl~~~a~~~yg~~F~~ 460 (531)
T PRK09275 389 Q-QVQMALFSLFSLL-DEEDAYKKAMKDIIRRRYKALYEGLG----LP-EPEDPN-NAAYYTLIDLEEWAEKNYGKEFAE 460 (531)
T ss_pred H-HHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHCC----CC-CCCCCC-CCCEEEEEEHHHHHHHHHCHHHHH
T ss_conf 9-9999999999862-77338999999999999999998549----99-888987-655245660999999876789999
Q ss_pred H--HHHHHHHHHHHHHHCCEEECCCCC--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5--678889999988862828726655--6767505686158889999999999999999999998775
Q gi|254780153|r 324 S--QKSFCKSMLSFLEKEEIAYDIGSY--RDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLR 388 (391)
Q Consensus 324 ~--~~~~~~~~~~~l~~~g~~~~~~~~--r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~ 388 (391)
+ +....-++.-+|.++.+++-+.|. ..-.-++|||.=| .+++|-.+.-+.|...+.+-...+.+
T Consensus 461 ~l~~~~~p~d~lfrLA~e~~vVLl~G~GF~~p~ws~RVSLAN-L~~~dY~~IG~~i~~~l~eY~~~~~~ 528 (531)
T PRK09275 461 YLKKNYSPLDLLFRLAEETGIVLLPGGGFGGPEWSLRVSLAN-LNEEDYAKIGKSIRKLLDEYYEEYKK 528 (531)
T ss_pred HHHHHCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECC-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999728888899999987378995588779998625887368-99889999999999999999999987
No 391
>KOG4044 consensus
Probab=21.87 E-value=44 Score=13.58 Aligned_cols=51 Identities=18% Similarity=0.107 Sum_probs=32.7
Q ss_pred HHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEECCHHHHCCCC
Q ss_conf 676785565799742024202203203502568614886401101102545
Q gi|254780153|r 130 FSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHID 180 (391)
Q Consensus 130 ~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~vSs~g~~p~d 180 (391)
+.++...+.|.++..||---++....+.+...-+.-+|+||+||=...+-|
T Consensus 97 ~~~i~~~k~VvL~GiEthvCv~qTa~dLl~rgl~VhvVaDacSSRs~~DR~ 147 (201)
T KOG4044 97 LKDIFGGKTVVLFGIETHVCVLQTALDLLERGLNVHVVADACSSRSNQDRD 147 (201)
T ss_pred HHHCCCCCEEEEEECCHHEEHHHHHHHHHHCCCEEEEEEEHHCCCCCHHHH
T ss_conf 875359974999831000004887999986796499985400242000078
No 392
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit; InterPro: IPR012722 Members of this eukaryotic family are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding.
Probab=21.60 E-value=53 Score=13.10 Aligned_cols=63 Identities=8% Similarity=0.106 Sum_probs=36.7
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHH--HHHHHHHHHHCCEEECC
Q ss_conf 9999999874797167668820036531789824731011373456788--89999988862828726
Q gi|254780153|r 280 AAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSF--CKSMLSFLEKEEIAYDI 345 (391)
Q Consensus 280 a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~--~~~~~~~l~~~g~~~~~ 345 (391)
|-++|+..-...-|++. ++.+.|=++|+-+..|...++.+-.++.- .+.+.......+++-|.
T Consensus 357 AGlVYE~~~GEEKyTFi---Ee~~~PkScTiLIkGpn~~ti~QiKDAvRDGLRAv~N~i~D~cv~~GA 421 (548)
T TIGR02347 357 AGLVYETVIGEEKYTFI---EEVKNPKSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGA 421 (548)
T ss_pred CCEEEEEEECCCCCEEE---EECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 52134135568500022---103878616887328864467764676652257645454135513561
No 393
>TIGR00611 recf DNA replication and repair protein RecF; InterPro: IPR001238 All proteins in this family, including recF, for which functions are known are DNA binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair. RecF is involved in DNA metabolism and is required for recombinational DNA repair and for induction of the SOS response , . ; GO: 0003697 single-stranded DNA binding, 0005524 ATP binding, 0006281 DNA repair.
Probab=21.55 E-value=32 Score=14.43 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC--CEEECCCCCCCCCCEEE
Q ss_conf 7999999987479716766882003653178982473101137345678889999988862--82872665567675056
Q gi|254780153|r 279 NAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE--EIAYDIGSYRDAPLGLR 356 (391)
Q Consensus 279 ~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~~~~~r~~~~~~R 356 (391)
-++.+|+.+. ++.+.. .-.|++.+-++ .++++... .+....+.+.+.....++ -++--.|+||.= --||
T Consensus 230 ~~~~~~~~~l--~~~~~~--~~~y~~s~e~~-~~~~~~~~---~~~~~~~~~~L~~~~~~d~~rg~T~~GPHRdD-l~~~ 300 (399)
T TIGR00611 230 EAQKAHQLLL--PELESL--SLFYRGSLEVI-DADEAETL---WDIETDYAEALARNFERDLERGYTLVGPHRDD-LRFR 300 (399)
T ss_pred HHHHHHHHHC--CCCHHH--HHHHCCCEEEE-ECCCCCCH---HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHH
T ss_conf 9999999742--520234--55430120133-27871256---88999999999987466886689964873477-7754
Q ss_pred EECCC
Q ss_conf 86158
Q gi|254780153|r 357 VWVGV 361 (391)
Q Consensus 357 Ig~~g 361 (391)
|+=++
T Consensus 301 ~n~~p 305 (399)
T TIGR00611 301 LNGLP 305 (399)
T ss_pred HCCCC
T ss_conf 15858
No 394
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=21.48 E-value=53 Score=13.08 Aligned_cols=164 Identities=15% Similarity=0.153 Sum_probs=79.7
Q ss_pred CCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHC--CC---------------CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 987655646--899888688877689689999863210--36---------------53289889999999999999996
Q gi|254780153|r 1 MLDMRKPTR--KPKRPFFSSGPCAKRPGWSLGILEGAL--LG---------------RSHRCVLGKERINKAIQLTRKVL 61 (391)
Q Consensus 1 ~~~~~~~~~--~p~~~~F~pGP~~~~p~~v~~~~~~~~--l~---------------~sHRs~~f~~i~~~~~~~l~~l~ 61 (391)
|+++=+++- --+.++|-+|||.+--+.-...++..+ ++ .|-|++-. + ==+....+++-+
T Consensus 1 ~~~~~~~f~~~~~~k~~lIAGPC~iES~e~~~~~A~~lk~~g~~~~r~~~~K~RTs~~sfrG~G~-e-gL~~L~~vk~~~ 78 (250)
T PRK13397 1 MIDIMSDFQNKTCSKNNFIVGPCSIESYDHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGL-Q-GIRYLHEVCQEF 78 (250)
T ss_pred CCHHHHHHCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCH-H-HHHHHHHHHHHC
T ss_conf 90267654046888887885587330999999999999984988575362688899977678888-8-999999999983
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-------
Q ss_conf 8899857999748734899987532057897079970736888887653238763067405777657867678-------
Q gi|254780153|r 62 EVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD------- 134 (391)
Q Consensus 62 ~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------- 134 (391)
++|---+| --..+.|.+. .. +.++-.|.|--|-...+...+..+..+ ...-|+..++++|.
T Consensus 79 glpi~TdV-----h~~~q~e~v~-~~-----vDilQIpAfl~rqtdLl~a~a~t~kpV-~iKkgq~~s~~~~~~a~eki~ 146 (250)
T PRK13397 79 GLLSVSEI-----MSERQLEEAY-DY-----LDVIQVGARNMQNFEFLKTLSHIDKPI-LFKRGLMATIEEYLGALSYLQ 146 (250)
T ss_pred CCCEEEEC-----CCHHHHHHHH-HH-----CCEEEECHHHHCCHHHHHHHHHHCCEE-EECCCCCCCHHHHHHHHHHHH
T ss_conf 99748847-----9999999998-44-----748987726404989999987309808-978877799999999999999
Q ss_pred --CCCCEEEEEEECCCCEEEC---CEE-----EECCCCCCEEEEEECCHHHHCCC
Q ss_conf --5565799742024202203---203-----50256861488640110110254
Q gi|254780153|r 135 --FDRDVVFVWNGTTSGVCVP---DVG-----FIPESREGLVICDATSAVFARHI 179 (391)
Q Consensus 135 --~~~~v~~~h~ETstGv~~~---~~~-----~~~~~~~~llivD~vSs~g~~p~ 179 (391)
-...+.+|+=.|+ |.... ... .+.+..+.++|+|++-|.|.+++
T Consensus 147 ~~Gn~~i~l~ERG~~-gy~~~~rn~~d~~~ip~~~~~~~~PVi~D~SHs~G~r~~ 200 (250)
T PRK13397 147 DTGKSNIILCERGVR-GYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGRRDL 200 (250)
T ss_pred HCCCCCEEEEECCCC-CCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCH
T ss_conf 659982899828987-555631257007777999961599989928754788252
No 395
>KOG4181 consensus
Probab=21.35 E-value=33 Score=14.40 Aligned_cols=30 Identities=10% Similarity=-0.034 Sum_probs=16.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 158889999999999999999999998775
Q gi|254780153|r 359 VGVTVEKEDLLLLCDWLRWVFYFQKISFLR 388 (391)
Q Consensus 359 ~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~ 388 (391)
........++.+.+.+++++..+.....++
T Consensus 395 L~pe~~~~~~~afl~~~~E~v~e~rer~~k 424 (491)
T KOG4181 395 LLPEVSSNKATAFLSCLGELVREFRERILK 424 (491)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 385546535667877538898864486627
No 396
>KOG1405 consensus
Probab=20.73 E-value=55 Score=12.98 Aligned_cols=202 Identities=11% Similarity=0.011 Sum_probs=94.1
Q ss_pred CEEEEEEE--CCCCEEECC-------EEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECH
Q ss_conf 57997420--242022032-------035025686148864011011025455685799970012001766515445677
Q gi|254780153|r 138 DVVFVWNG--TTSGVCVPD-------VGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSP 208 (391)
Q Consensus 138 ~v~~~h~E--TstGv~~~~-------~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~ 208 (391)
.|+-+-.| -|.|-.+.. .+.++.++++.+|||-|++=|+-.=++|..+ |=+|..|| -+|.+|+
T Consensus 271 pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHe------hw~l~~Pp--D~vTFSK 342 (484)
T KOG1405 271 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHE------HWNLDSPP--DVVTFSK 342 (484)
T ss_pred CEEEEEEECHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEH------HCCCCCCC--CCEEHHH
T ss_conf 757998651102578866898999999999986495899640000788667543202------03899995--1011025
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987
Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391)
Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391)
+... .+++ .-..+....-| +-.+.|..-|.- ...+.+++..|.+++=+ +......+.++.++.
T Consensus 343 K~q~-------gGff-h~~~frpn~pY---rifNTWmGdP~k--~lll~~vv~~I~~~~Ll----~n~~~vG~~l~~gL~ 405 (484)
T KOG1405 343 KFQT-------GGFF-HDEEFRPNEPY---RIFNTWMGDPSK--NLLLEEVVQEIKREDLL----NNVAHVGKALLKGLL 405 (484)
T ss_pred HHHC-------CCCC-CCCCCCCCCHH---HHHHHHCCCHHH--HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_conf 5522-------7642-47334878447---876543078588--89999999998588899----889999999998899
Q ss_pred HCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 4797167668820036531-789824731011373456788899999888628287266556767505686158889999
Q gi|254780153|r 289 ENDWIENLAVDETTRSNTS-ICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKED 367 (391)
Q Consensus 289 ~~~~~~~~~~~~~~rS~~~-v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~d 367 (391)
.+.--++-- -...|++.. +.+..+++... -.+...+.-+|+.+ ||-.. +++|.--.=.-+...
T Consensus 406 ~Lq~~~p~~-~~~~RGrGTF~a~d~ps~~~R-----------dk~i~~~~~nGv~~--GGCg~--~siRfRPsLvf~~~H 469 (484)
T KOG1405 406 ELQAKYPGK-INNLRGRGTFIAWDCPSGSIR-----------DKLILIARLNGVNL--GGCGD--KSIRFRPSLVFRKHH 469 (484)
T ss_pred HHHHHCCHH-HHCCCCCCEEEEEECCCHHHH-----------HHHHHHHHHCCCEE--CCCCC--CEEEECCCEEEHHHH
T ss_conf 998868425-542456632799738981788-----------99999998769421--46542--025403320114666
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780153|r 368 LLLLCDWLRWVFY 380 (391)
Q Consensus 368 v~~L~~aLe~~~~ 380 (391)
.+-+++.++..++
T Consensus 470 a~i~l~~~~k~l~ 482 (484)
T KOG1405 470 ADIFLDIFDKILA 482 (484)
T ss_pred HHHHHHHHHHHHC
T ss_conf 8899999999860
No 397
>cd01015 CSHase N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.
Probab=20.66 E-value=27 Score=14.90 Aligned_cols=78 Identities=5% Similarity=-0.099 Sum_probs=40.4
Q ss_pred EECCHHHHHHHHHHHCCCCCEEEEECCCC--CCCCHHHC---CCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEEEEC
Q ss_conf 70736888887653238763067405777--65786767---85565799742024202203203502568614886401
Q gi|254780153|r 97 AWESFGLGWMSDIRQLSLQDVREFTAPYG--SLPDFSKV---DFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDAT 171 (391)
Q Consensus 97 ~~g~~~~r~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~---~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~llivD~v 171 (391)
..|.++..+..++..... +..+.+..+. ...+++.+ ...+.+.++-..|...|...........+...++-||+
T Consensus 71 ~~g~~~~~~~~~l~p~~~-d~vi~K~~~saF~~T~L~~~Lr~~gI~~lvi~G~~T~~CV~~Ta~dA~~~gy~v~vv~Da~ 149 (179)
T cd01015 71 VEGSPLAAICDELAPQED-EMVLVKKYASAFFGTSLAATLTARGVDTLIVAGCSTSGCIRATAVDAMQHGFRPIVVRECV 149 (179)
T ss_pred CCCCCCCCCCCCCCCCCC-CEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 799972340645478999-8899738778676876899998679977999840013789999999998899799945055
Q ss_pred CHHH
Q ss_conf 1011
Q gi|254780153|r 172 SAVF 175 (391)
Q Consensus 172 Ss~g 175 (391)
++..
T Consensus 150 a~~~ 153 (179)
T cd01015 150 GDRA 153 (179)
T ss_pred CCCC
T ss_conf 8999
No 398
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=20.58 E-value=55 Score=12.96 Aligned_cols=70 Identities=13% Similarity=0.108 Sum_probs=44.7
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE--EECCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 99999999688998579997487348999875320578970799--707368888876532387630674057
Q gi|254780153|r 53 AIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL--AWESFGLGWMSDIRQLSLQDVREFTAP 123 (391)
Q Consensus 53 ~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~--~~g~~~~r~~~~~~~~~~~~~~~~~~~ 123 (391)
+...+-++++...+.+|+= -|+|||=-.|++..+++++..++. ..-....+..+...+.+..++.+...+
T Consensus 63 iVA~MlElL~l~pg~rVLE-IGTGSGYqAAlLA~Lvg~~G~V~TIE~~~~L~~~Ar~~L~~lG~~NV~vv~GD 134 (317)
T PRK13943 63 LMALFMEWVGLDKGMRVLE-IGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD 134 (317)
T ss_pred HHHHHHHHHCCCCCCEEEE-ECCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9999999717899986899-65774389999999848787599998679999999999997799864999799
No 399
>TIGR02153 gatD_arch glutamyl-tRNA(Gln) amidotransferase, subunit D; InterPro: IPR011878 This peptide is found only in the Archaea. It is part of a heterodimer, with GatD (IPR004414 from INTERPRO), that acts as an amidotransferase on misacylated Glu-tRNA(Gln) to produce Gln-tRNA(Gln). The analogous amidotransferase found in bacteria is the GatABC system, although GatABC homologs in the Archaea appear to act instead on Asp-tRNA(Asn) .; GO: 0006450 regulation of translational fidelity.
Probab=20.45 E-value=55 Score=12.95 Aligned_cols=115 Identities=18% Similarity=0.098 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-CC--CCEEEEEECCHHHHH-HHHHHHCCCCCEEEE
Q ss_conf 89999999999999996889985799974873489998753205-78--970799707368888-876532387630674
Q gi|254780153|r 45 LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-GY--RGVDVLAWESFGLGW-MSDIRQLSLQDVREF 120 (391)
Q Consensus 45 ~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-~~--~~~~~~~~g~~~~r~-~~~~~~~~~~~~~~~ 120 (391)
...+|-+++ .+-++-+++ -|++.+|.=|.++.|++++|+ +. ..-+++|..-.|..| ..|++- +..
T Consensus 127 ~W~~IA~~V----~~al~~G~~-GVVvaHGTDTM~YTAaALSFm~~~Gl~~PvVlVGAQRSSDRPSSDAa~-NL~----- 195 (413)
T TIGR02153 127 YWIKIAEAV----AKALEEGAD-GVVVAHGTDTMAYTAAALSFMFKTGLPVPVVLVGAQRSSDRPSSDAAL-NLI----- 195 (413)
T ss_pred HHHHHHHHH----HHHHCCCCC-EEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHH-HHH-----
T ss_conf 999999999----998408995-389941587468999999999971699988998574358887313799-999-----
Q ss_pred ECCCCCCCCHHHC-CCCCCEEEEEEECCCCEEECCEE--E-ECCCCCCEEEEEECCHHHHCCC
Q ss_conf 0577765786767-85565799742024202203203--5-0256861488640110110254
Q gi|254780153|r 121 TAPYGSLPDFSKV-DFDRDVVFVWNGTTSGVCVPDVG--F-IPESREGLVICDATSAVFARHI 179 (391)
Q Consensus 121 ~~~~g~~~~~~~~-~~~~~v~~~h~ETstGv~~~~~~--~-~~~~~~~llivD~vSs~g~~p~ 179 (391)
-......- |.+..+..=|-|||-+.+.=.-. . -.|..- =||=.|+...|+
T Consensus 196 -----~A~~~A~~a~~aEV~VvMHG~tsD~yc~~HRGVkVRKMHTSR----RDAF~SiN~~Pi 249 (413)
T TIGR02153 196 -----AAVRAATSAPIAEVVVVMHGETSDTYCLVHRGVKVRKMHTSR----RDAFQSINSIPI 249 (413)
T ss_pred -----HHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCEEECCCCCC----HHHHHCCCCCCC
T ss_conf -----999983369710038884012488679996582350365881----025531588653
No 400
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=20.30 E-value=56 Score=12.93 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=18.5
Q ss_pred CEEEEEECCH-HHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 7079970736-88888765323876306740577
Q gi|254780153|r 92 GVDVLAWESF-GLGWMSDIRQLSLQDVREFTAPY 124 (391)
Q Consensus 92 ~~~~~~~g~~-~~r~~~~~~~~~~~~~~~~~~~~ 124 (391)
+.++++.|++ +-.++..+.+.+ .+|++++...
T Consensus 173 k~v~IiGgG~ig~E~A~~~~~lG-~~Vtli~~~~ 205 (462)
T PRK06416 173 KSLVVIGGGYIGIEFASAYASLG-AEVTIIEALP 205 (462)
T ss_pred CEEEEECCCHHHHHHHHHHHHHC-CEEEEEECCC
T ss_conf 76999889787889999999739-7689974054
No 401
>TIGR02774 rexB_recomb ATP-dependent nuclease subunit B; InterPro: IPR014141 DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA is conserved between the firmicutes and the alphaproteobacteria, while its partner protein (RexB) is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important. This entry represents RexB proteins as found in Streptococcus and Lactococcus..
Probab=20.12 E-value=56 Score=12.90 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=29.6
Q ss_pred CCCEEEEEECCHHHHCC------CCCCCCEEEEE--CCHHCCCCC
Q ss_conf 86148864011011025------45568579997--001200176
Q gi|254780153|r 162 REGLVICDATSAVFARH------IDFNKLDVVTF--SAQKVLGGE 198 (391)
Q Consensus 162 ~~~llivD~vSs~g~~p------~d~~~iDv~~a--~sQK~l~~p 198 (391)
....+|||+=|=|-+++ +.-.+.+|++. .|||+--.|
T Consensus 185 ~~~vlvvDGFtRFSAEEe~lv~~L~~~g~eiiIGaYaSqKAY~~~ 229 (1116)
T TIGR02774 185 KNTVLVVDGFTRFSAEEEALVSLLHEKGVEIIIGAYASQKAYKSS 229 (1116)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCC
T ss_conf 847889717877408899999997349707997462222533157
Done!