HHsearch alignment for GI: 254780153 and conserved domain: pfam01276

>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=98.84  E-value=3e-06  Score=59.09  Aligned_cols=218  Identities=14%  Similarity=0.057  Sum_probs=132.0

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEE---C
Q ss_conf             999999999999996889985799974873489998753205789707997-073688888765323876306740---5
Q gi|254780153|r   47 KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFT---A  122 (391)
Q Consensus        47 ~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~---~  122 (391)
T Consensus        65 ~g~I~eAq~~aA~~fga~---~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv~RN~HkSv---~~al~l~g~~Pvyl~p~~~  138 (417)
T pfam01276        65 SGPIKEAQKYAARVFGAD---KSYFVVNGTSGANKTVGMAVCTPGDTVLIDRNCHKSI---HHALMMSGATPVYLEPTRN  138 (417)
T ss_pred             CHHHHHHHHHHHHHHCCC---CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHH---HHHHHHCCCEEEEECCCCC
T ss_conf             639999999999983999---3699846830999999997438999899716418999---9999986985899536424


Q ss_pred             CCCCC--CCH------------HHCCCCCC--EEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH--HHHCCCCC-
Q ss_conf             77765--786------------76785565--7997420242022032035--0256861488640110--11025455-
Q gi|254780153|r  123 PYGSL--PDF------------SKVDFDRD--VVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA--VFARHIDF-  181 (391)
Q Consensus       123 ~~g~~--~~~------------~~~~~~~~--v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs--~g~~p~d~-  181 (391)
T Consensus       139 ~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~plp~~  218 (417)
T pfam01276       139 AYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTYDGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIPIYAD  218 (417)
T ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHH
T ss_conf             34661588825459999999998587656850899989998706528999999986339879997887520246878334


Q ss_pred             ---CCCE-------EEEECCHHCCCCCCCCEEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCH
Q ss_conf             ---6857-------9997001200176651544567788-8765411445778312320011232103347864466644
Q gi|254780153|r  182 ---NKLD-------VVTFSAQKVLGGEAGFGIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSL  250 (391)
Q Consensus       182 ---~~iD-------v~~a~sQK~l~~ppGl~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v  250 (391)
T Consensus       219 a~~~gad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~-----------~~--~~~~l~~------~qT-TSPsY  278 (417)
T pfam01276       219 ASPMGGDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNH-----------KR--FNEAFMM------HTS-TSPFY  278 (417)
T ss_pred             HHHCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCH-----------HH--HHHHHHH------HCC-CCHHH
T ss_conf             6656788666772279861111354304343212167877899-----------99--9999997------738-87489


Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             88999999998620103189999999977999999987479
Q gi|254780153|r  251 LCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND  291 (391)
Q Consensus       251 ~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~  291 (391)
T Consensus       279 ~lmASLD~ar~~m~~~~G~-~l~~~~i~~a~~~R~~i~~l~  318 (417)
T pfam01276       279 PIVASLDVAAAMMEGNSGR-RLWQESLERAIEFRKEIKTLN  318 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999997535549-999999999999999998645