HHsearch alignment for GI: 254780153 and conserved domain: pfam01276
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=98.84 E-value=3e-06 Score=59.09 Aligned_cols=218 Identities=14% Similarity=0.057 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEE---C
Q ss_conf 999999999999996889985799974873489998753205789707997-073688888765323876306740---5
Q gi|254780153|r 47 KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFT---A 122 (391)
Q Consensus 47 ~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~---~ 122 (391)
T Consensus 65 ~g~I~eAq~~aA~~fga~---~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv~RN~HkSv---~~al~l~g~~Pvyl~p~~~ 138 (417)
T pfam01276 65 SGPIKEAQKYAARVFGAD---KSYFVVNGTSGANKTVGMAVCTPGDTVLIDRNCHKSI---HHALMMSGATPVYLEPTRN 138 (417)
T ss_pred CHHHHHHHHHHHHHHCCC---CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHH---HHHHHHCCCEEEEECCCCC
T ss_conf 639999999999983999---3699846830999999997438999899716418999---9999986985899536424
Q ss_pred CCCCC--CCH------------HHCCCCCC--EEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH--HHHCCCCC-
Q ss_conf 77765--786------------76785565--7997420242022032035--0256861488640110--11025455-
Q gi|254780153|r 123 PYGSL--PDF------------SKVDFDRD--VVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA--VFARHIDF- 181 (391)
Q Consensus 123 ~~g~~--~~~------------~~~~~~~~--v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs--~g~~p~d~- 181 (391)
T Consensus 139 ~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~plp~~ 218 (417)
T pfam01276 139 AYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTYDGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIPIYAD 218 (417)
T ss_pred CCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHH
T ss_conf 34661588825459999999998587656850899989998706528999999986339879997887520246878334
Q ss_pred ---CCCE-------EEEECCHHCCCCCCCCEEEEECHHH-HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCH
Q ss_conf ---6857-------9997001200176651544567788-8765411445778312320011232103347864466644
Q gi|254780153|r 182 ---NKLD-------VVTFSAQKVLGGEAGFGIIILSPAS-VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSL 250 (391)
Q Consensus 182 ---~~iD-------v~~a~sQK~l~~ppGl~~v~~s~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v 250 (391)
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~-----------~~--~~~~l~~------~qT-TSPsY 278 (417)
T pfam01276 219 ASPMGGDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNH-----------KR--FNEAFMM------HTS-TSPFY 278 (417)
T ss_pred HHHCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCH-----------HH--HHHHHHH------HCC-CCHHH
T ss_conf 6656788666772279861111354304343212167877899-----------99--9999997------738-87489
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 88999999998620103189999999977999999987479
Q gi|254780153|r 251 LCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND 291 (391)
Q Consensus 251 ~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~ 291 (391)
T Consensus 279 ~lmASLD~ar~~m~~~~G~-~l~~~~i~~a~~~R~~i~~l~ 318 (417)
T pfam01276 279 PIVASLDVAAAMMEGNSGR-RLWQESLERAIEFRKEIKTLN 318 (417)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999997535549-999999999999999998645