HHsearch alignment for GI: 254780153 and conserved domain: pfam02347
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=98.25 E-value=0.00045 Score=45.32 Aligned_cols=301 Identities=15% Similarity=0.027 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC-C--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 99999999999999968899857999748734899987532057-8--97079970736888887653238763067405
Q gi|254780153|r 46 GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG-Y--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTA 122 (391)
Q Consensus 46 f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~-~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~ 122 (391)
T Consensus 108 ~LqalfefQtmi~eLTGmdvaN-ASly-D~aTA~aEA~~ma~r~~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~~ 185 (429)
T pfam02347 108 RLEALLNFQTMVCDLTGLDVAN-ASLL-DEGTAAAEAMALAARISKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVEV 185 (429)
T ss_pred HHHHHHHHHHHHHHHHCCCCCC-CCCC-CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9999999999999985887568-7666-6788999999998765157887799828878318999997542279579996
Q ss_pred CCCCCCCHHHCC-CCCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEE--EECCHHHHC-CCCCCCCEEEEECCH----
Q ss_conf 777657867678-55657997420242022032035--02568614886--401101102-545568579997001----
Q gi|254780153|r 123 PYGSLPDFSKVD-FDRDVVFVWNGTTSGVCVPDVGF--IPESREGLVIC--DATSAVFAR-HIDFNKLDVVTFSAQ---- 192 (391)
Q Consensus 123 ~~g~~~~~~~~~-~~~~v~~~h~ETstGv~~~~~~~--~~~~~~~lliv--D~vSs~g~~-p~d~~~iDv~~a~sQ---- 192 (391)
T Consensus 186 ~~~~~---~~~~~~~~a~v~~q~Pn~~G~ied~~~i~~~~h~~gal~iv~~dpls-L~ll~~Pg~~GaDI~vG~~Q~lGi 261 (429)
T pfam02347 186 DLTEE---GFSDEGDVFGVLVQYPNTEGRIEDYKELIEIAHQHGSLVVVAADLLA-LTILKPPGEFGADIVVGSAQRFGV 261 (429)
T ss_pred CCCCC---CCCCCCCEEEEEEECCCCCCCEECCHHHHHHHHHCCCEEEEEECHHH-HCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 72001---45555476899993799983172349999998645966999807799-607689765663379725765788
Q ss_pred -HCCCCCCCCEEEEECHHHHHHHHHCC----CCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHC
Q ss_conf -20017665154456778887654114----45778312320011232103347864466644889999999--986201
Q gi|254780153|r 193 -KVLGGEAGFGIIILSPASVERLEKYV----PSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDA--LLWLKK 265 (391)
Q Consensus 193 -K~l~~ppGl~~v~~s~~al~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~--l~~i~~ 265 (391)
T Consensus 262 pm~fGG-P~~gf~a~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~Y~~~~Gp 340 (429)
T pfam02347 262 PMGYGG-PHAGFFAVKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 340 (429)
T ss_pred CCCCCC-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
T ss_conf 878898-8200154488899749976446775889987336541243430334442034650089999999999998697
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECC
Q ss_conf 03189999999977999999987479716766882003653178982473101137345678889999988862828726
Q gi|254780153|r 266 MGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDI 345 (391)
Q Consensus 266 ~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 345 (391)
T Consensus 341 -~GL~~iA~~~~~~A~yl~~~L~~~~g~~~--~~~~Ff-d~v-~~~~~-~~-----------~~~~l~~~~i~~G~--~l 401 (429)
T pfam02347 341 -KGLKEIARRIHSLTLYLAKGLKKLAGHEL--DHDHFF-DTL-KITVE-DR-----------AAEELLKRAEKGGI--NL 401 (429)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHCCCEEC--CCCCCC-CEE-EEECC-CH-----------HHHHHHHHHHHCCC--CE
T ss_conf -88999999999999999999986699766--799962-159-99628-27-----------89999999997799--73
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 65567675056861588899999999999
Q gi|254780153|r 346 GSYRDAPLGLRVWVGVTVEKEDLLLLCDW 374 (391)
Q Consensus 346 ~~~r~~~~~~RIg~~g~i~~~dv~~L~~a 374 (391)
T Consensus 402 ~-~~~~~-~~li~vtE~~T~edId~Lv~~ 428 (429)
T pfam02347 402 R-YVDLG-TVGIALDETTTKEDVDALLKV 428 (429)
T ss_pred E-ECCCC-EEEEEECCCCCHHHHHHHHHH
T ss_conf 6-53899-499996479999999999975