HHsearch alignment for GI: 254780153 and conserved domain: pfam03841
>pfam03841 SelA L-seryl-tRNA selenium transferase.
Probab=98.07 E-value=0.0007 Score=44.08 Aligned_cols=187 Identities=19% Similarity=0.202 Sum_probs=105.4
Q ss_pred CCCCCCHHHHHHHHHHHCCC---------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 87768968999986321036---------532898899999999999999968899857999748734899987532057
Q gi|254780153|r 19 GPCAKRPGWSLGILEGALLG---------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391)
Q Consensus 19 GP~~~~p~~v~~~~~~~~l~---------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391)
T Consensus 14 GRa~l~~~-a~~a~~~~~~~y~nLE~dl~~g~RG~----R~~~~~~ll~~ltgaE~---a~vVNn-nAaAv~L~l~~la- 83 (367)
T pfam03841 14 GRALLSEE-AVEAAKEAARHYSNLEYDLESGKRGS----RDSHLEELLCELTGAED---ALVVNN-NAAAVLLVLNTLA- 83 (367)
T ss_pred CCCCCCHH-HHHHHHHHHCCCCHHHHHHHHCCCCC----HHHHHHHHHHHHHCCCE---EEEECC-CHHHHHHHHHHHH-
T ss_conf 77789999-99999998617720366674177663----57899999998639865---999878-3899999999875-
Q ss_pred CCCEEEEEECC---H--HHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHH-CCCCC-CEEEEE--EECCCCE----EECCE
Q ss_conf 89707997073---6--88888765323876306740-57776578676-78556-579974--2024202----20320
Q gi|254780153|r 90 YRGVDVLAWES---F--GLGWMSDIRQLSLQDVREFT-APYGSLPDFSK-VDFDR-DVVFVW--NGTTSGV----CVPDV 155 (391)
Q Consensus 90 ~~~~~~~~~g~---~--~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~-~~~~~-~v~~~h--~ETstGv----~~~~~ 155 (391)
T Consensus 84 ~g~evivSRGelVeiGgsfRiPdim~~-sGa~LvEVGtTNrT~l~DYe~AI~e~Ta~llkVH~SN~~i~GFt~~v~~~el 162 (367)
T pfam03841 84 QGKEVIISRGELVEIGGSFRIPDIMKQ-SGARLVEVGTTNRTHLKDYEQAINENTALLMKVHTSNYRIQGFTKEVSLAEL 162 (367)
T ss_pred CCCCEEEECCEEECCCCCCCCHHHHHH-CCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCHHHH
T ss_conf 489057755545123875440899996-5978998256688898999987082461899994265122374677999999
Q ss_pred EEECCCCCCEEEEEECCHHH---------HCCC--C--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC
Q ss_conf 35025686148864011011---------0254--5--5685799970012001766515445677888765411
Q gi|254780153|r 156 GFIPESREGLVICDATSAVF---------ARHI--D--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY 217 (391)
Q Consensus 156 ~~~~~~~~~llivD~vSs~g---------~~p~--d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~ 217 (391)
T Consensus 163 ~~la~~~~ip~i~DlGSG~l~d~~~~gl~~Ep~v~~~l~~GaDlV~FSGDKLLGGP-QAGII~Gkk~lI~~ikkn 236 (367)
T pfam03841 163 VALGKEHGLPVYYDLGSGSLVDLSQYGLPKEPTVQELLALGVDLVSFSGDKLLGGP-QAGIIVGKKELIERLKKN 236 (367)
T ss_pred HHHHHHCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC-CCCEEEECHHHHHHHHHC
T ss_conf 99998769967997586631122001799999899999739988998676456898-532476459999974647