HHsearch alignment for GI: 254780153 and conserved domain: pfam05889

>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=94.74  E-value=0.33  Score=27.08  Aligned_cols=166  Identities=17%  Similarity=0.134  Sum_probs=94.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCC-CEEEEEECCHHHHH-HHHHHHCCCCCEEEE
Q ss_conf             9889999999999999996889985799974873489998753205789-70799707368888-876532387630674
Q gi|254780153|r   43 CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYR-GVDVLAWESFGLGW-MSDIRQLSLQDVREF  120 (391)
Q Consensus        43 s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~-~~~~~~~g~~~~r~-~~~~~~~~~~~~~~~  120 (391)
T Consensus        51 sSll~kLTn~l~~d~lr~~G~~s~~~~~vvP-~aTGMsl~~~L~~~~~rp~a~yViw~RiDqKSc~Kai~~AG-l~p~vV  128 (389)
T pfam05889        51 SSVLAKLTNELVKDFLKLLGLREVKNCFVVP-LATGMSLLCMLSWRRKRPKAKYVIWPRIDQKSSIKAAERAG-FEPRLV  128 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC-CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC-CEEEEE
T ss_conf             1899999999999999982974316578950-41047999999998558899789986355522689999769-714887


Q ss_pred             E---CCCCCCCCHHHCCC------CCCEEEEEEECCCCE-EECC----EEEECCCCCCEEEEEEC---CH-HHHCCCC--
Q ss_conf             0---57776578676785------565799742024202-2032----03502568614886401---10-1102545--
Q gi|254780153|r  121 T---APYGSLPDFSKVDF------DRDVVFVWNGTTSGV-CVPD----VGFIPESREGLVICDAT---SA-VFARHID--  180 (391)
Q Consensus       121 ~---~~~g~~~~~~~~~~------~~~v~~~h~ETstGv-~~~~----~~~~~~~~~~llivD~v---Ss-~g~~p~d--  180 (391)
T Consensus       129 e~~~~~d~l~Td~~~ie~~i~~~g~~~ilcVlsTTScFaPR~pD~v~~IAklC~~~~IpHvVNnAYGlQ~~~~~~~i~~a  208 (389)
T pfam05889       129 ETVLDGDYLITDVNDVETIIEEKGEEVILAVLSTTSCFAPRSPDNVKEIAKICAEYDVPHLVNGAYGIQSEETIRLIAAA  208 (389)
T ss_pred             EEEECCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
T ss_conf             52522882435899999999983877668998446656999966799999999974997478430366179999999999


Q ss_pred             --CCCCEEEEECCHHCCCCCCCCEEEEECHHH
Q ss_conf             --568579997001200176651544567788
Q gi|254780153|r  181 --FNKLDVVTFSAQKVLGGEAGFGIIILSPAS  210 (391)
Q Consensus       181 --~~~iDv~~a~sQK~l~~ppGl~~v~~s~~a  210 (391)
T Consensus       209 ~r~GRVDa~VQStDKNflVPVGGaIIas~d~~  240 (389)
T pfam05889       209 HECGRVDAVVQSLDKNFIVPVGGAIIAAFDES  240 (389)
T ss_pred             HHCCCCEEEEEECCCCEEEECCCEEEEECCHH
T ss_conf             86388218997068662553487489708889