RPSBLAST alignment of GI: 254780156 and MMDB domain: 1vdw_A_

>1vdw_A (A:) Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii}Length = 254

 Score =  164 bits (416), Expect = 8e-42
 Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 20/264 (7%)

Query: 1   MSRSALLNVMVSAALKAGKFLSRDFGEVQDLQ-VSRKGPSDFVMKSHSKCQEIIYQELLG 59
           MS      + +         +   FG  +  + +S     D         + II  +   
Sbjct: 1   MSVKTWRKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKF-- 58

Query: 60  ARPKYGFYSGGKAYVGQDSITRWIVDPLNGITNFFYAIPHFCISIALERDQEIIASVIFN 119
                   S     + Q S    +VDPL+G  NF   IP F +S+A+  +++ I + I+ 
Sbjct: 59  KDLGVNVVSEEIGRIDQGSDYTVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYE 118

Query: 120 PITDELYTAERGIGSFLNDRRIRVSSRRILSNSIICYATFKRNSRFLMQLCRIMDEAVGV 179
           PI + LY    G GS+LN  +I+V       +                +  +I+D+    
Sbjct: 119 PIVERLYEGIPGKGSYLNGEKIKVRELAEKPSISFYTK---------GKGTKIIDKVKRT 169

Query: 180 RSFGSEALDLAYIAAGRFDGF--LGKGLSIWCVAAGLLIICEAGGFATDFLGKNMGAETK 237
           R+ G+ AL+LAY+A G  D    +   L    +AAG++I  EAG    D  GK++     
Sbjct: 170 RTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFS 229

Query: 238 S------IISGNMPIHEQLLAIIN 255
           +      I + N  + E +L  I 
Sbjct: 230 ATEKVNIIAANNEELLETILRSIE 253