HHsearch alignment of GI: 254780157 and MMDB domain: 2dri_A_1-104_237-271

>2dri_A (A:1-104,A:237-271) D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli}
Probab=92.14  E-value=1  Score=25.62  Aligned_cols=86  Identities=13%  Similarity=0.291  Sum_probs=66.4

Q ss_pred             CCEEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf             874999958816989---99999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r    4 APPVAIIMGSQSDWK---IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM   80 (165)
Q Consensus         4 ~pkV~Ii~GS~SD~~---~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~   80 (165)
                      +.+|++++.+.+|--   +.+.+.+.++++|  |++.+....+.++...++++.+..++++.+|............+...
T Consensus         1 K~tIgvi~~~~~~~f~~~i~~gi~~~a~~~G--~~l~i~~~~~~~~~~~~~i~~li~~~vdgiIi~~~~~~~~~~~l~~l   78 (139)
T 2dri_A            1 KDTIALVVSTLNNPFFVSLKDGAQKEADKLG--YNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMA   78 (139)
T ss_dssp             CCEEEEEESCSSSHHHHHHHHHHHHHHHHHT--CEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHH
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             9889999288989899999999999999859--98999958999999999999998618764432122222316899999


Q ss_pred             --CCCCEEEECCC
Q ss_conf             --24203661257
Q gi|254780157|r   81 --TSLPVLGVPII   91 (165)
Q Consensus        81 --t~~PVIgVP~~   91 (165)
                        ...|||-+=..
T Consensus        79 ~~~gIPvV~id~~   91 (139)
T 2dri_A           79 NQANIPVITLDRQ   91 (139)
T ss_dssp             HHTTCCEEEESSC
T ss_pred             HHCCCCCCCCCCC
T ss_conf             8637753235655