HHsearch alignment of GI: 254780157 and MMDB domain: 2q5c_A_1-78_169-196
>2q5c_A (A:1-78,A:169-196) NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=96.34 E-value=0.036 Score=35.09 Aligned_cols=81 Identities=12% Similarity=0.178 Sum_probs=65.6
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 99887499995881698999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
|+|+.|+++|. .+....+.+.+++++++++.++.+. +.+...+..+..+ .++++||+-.|-+ ..+..+
T Consensus 1 M~m~~kI~~IA---PY~~L~~~~~~i~~e~~l~I~V~~g----~l~egv~iAr~l~-~g~DVIISRGgTA----~lIr~~ 68 (106)
T 2q5c_A 1 MSLSLKIALIS---QNENLLNLFPKLALEKNFIPITKTA----SLTRASKIAFGLQ-DEVDAIISRGATS----DYIKKS 68 (106)
T ss_dssp -CCCCEEEEEE---SCHHHHHHHHHHHHHHTCEEEEEEC----CHHHHHHHHHHHT-TTCSEEEEEHHHH----HHHHTT
T ss_pred CCCCEEEEEEC---CCHHHHHHHHHHHHHCCCEEEEEEE----EHHHHHHHHHHHH-CCCCEEEECCHHH----HHHHHH
T ss_conf 98740599987---8089999999998643846555433----2999999999875-5988999896489----999985
Q ss_pred CCCCEEEECCCCC
Q ss_conf 2420366125776
Q gi|254780157|r 81 TSLPVLGVPIISQ 93 (165)
Q Consensus 81 t~~PVIgVP~~~~ 93 (165)
++.|||.+|+.-.
T Consensus 69 v~iPVVeI~i~~~ 81 (106)
T 2q5c_A 69 VSIPSISIKVGEE 81 (106)
T ss_dssp CSSCEEEECCCHH
T ss_pred CCCCEEEEECCHH
T ss_conf 8998899707599