HHsearch alignment of GI: 254780157 and MMDB domain: 3lft_A_1-117_236-266
>3lft_A (A:1-117,A:236-266) Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=96.71 E-value=0.015 Score=37.48 Aligned_cols=130 Identities=17% Similarity=0.188 Sum_probs=87.5
Q ss_pred CCEEEEEECCCCCH--HHHHHHHHHHHHCCCC---EEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH
Q ss_conf 87499995881698--9999999999980998---265453010387999988987653598299997267668511346
Q gi|254780157|r 4 APPVAIIMGSQSDW--KIMKYAADMLDTLGID---YEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIA 78 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~--~~~~~a~~~L~~~gI~---~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva 78 (165)
+++|+|+-.++.+. ...+...+.|+++|+. .++.+-+|...+.++.+++++...+++++|++.+--+ .--+..
T Consensus 2 ~~rIgilq~~~~~~l~~~~~gf~~~L~~~G~~e~ni~i~~~~A~~D~~~l~~ia~~l~~~~~DlIva~gTpa--a~a~~~ 79 (148)
T 3lft_A 2 NAKIGVLQFVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFXNSEGDQSKVATXSKQLVANGNDLVVGIATPA--AQGLAS 79 (148)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHTTSSCSEEEEESHHH--HHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCHH--HHHHHH
T ss_conf 976999978777389999999999999759987607999967988999999999999746986798448478--999999
Q ss_pred HHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEE-CCCCCCHHHHHHHHHHHHCCC
Q ss_conf 522420366125776667500169984035698620443-167531228999999970699
Q gi|254780157|r 79 AMTSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMA-IGQSGAINASLLAVAILALDD 138 (165)
Q Consensus 79 ~~t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~-vg~~~~~NAal~A~~Il~~~d 138 (165)
..++.||+-.-+..-...| |....+.|.+-=.++.. +.-+=|+-.+-.|+|||-=++
T Consensus 80 ~~~~iPIVf~aVsdPv~aG---lv~s~~~pg~NiTGvsd~~~~~~g~~~~~~~~~~l~g~~ 137 (148)
T 3lft_A 80 ATKDLPVIXAAITDPIGAN---LVKDLKKPGGNVTGVSDHNQHDLGVATGKXIVQVLKGAK 137 (148)
T ss_dssp HCSSSCEEEESCSCTTTTT---SCSCSSCCCSSEEEEEECCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHCCCCEEEEECCCCCC---CCHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 7541376058984552123---311003689837999852899999999999999988599