HHsearch results for GI: 254780157 and protein with PDBid: 2q5c_A
>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=96.61 E-value=0.0098 Score=37.74 Aligned_cols=133 Identities=12% Similarity=0.187 Sum_probs=85.5
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 99887499995881698999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
|+|+.|++.|.- +....+.+.+..++.+....+.+. +.++-.+++++.+ ++++|||+--|-+ ..+-.+
T Consensus 1 m~~~~kI~~iap---~e~l~~l~~~~a~~~~~~~~~~~~----~l~~~~~iA~~l~-~~~DVIISRGgTa----~~Ir~~ 68 (196)
T 2q5c_A 1 MSLSLKIALISQ---NENLLNLFPKLALEKNFIPITKTA----SLTRASKIAFGLQ-DEVDAIISRGATS----DYIKKS 68 (196)
T ss_dssp -CCCCEEEEEES---CHHHHHHHHHHHHHHTCEEEEEEC----CHHHHHHHHHHHT-TTCSEEEEEHHHH----HHHHTT
T ss_pred CCCCCEEEEECC---CHHHHHHHHHHHHHCCCEEEEEEE----EHHHHHHHHHHHH-CCCCEEEECCHHH----HHHHHH
T ss_conf 987515999879---388999999999754875678866----6999999999754-3987999896589----999982
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC--------CCHHHHHHHHHHHHH
Q ss_conf 24203661257766675001699840356986204431675312289999999706--------999999999999999
Q gi|254780157|r 81 TSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL--------DDKELTDRLNEWRTQ 151 (165)
Q Consensus 81 t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~--------~d~~i~~kl~~~r~~ 151 (165)
++.|||.+|+++ ++=+.+|.-.-+.. -.++.+ |-.+-.+..-.-.++|++ +.+++.+.+.+.+++
T Consensus 69 ~~iPVVeI~vs~--~Dil~al~~a~~~~--~kiavv--gf~~~~~~~~~i~~ll~~~i~~~~~~~~~e~~~~i~~l~~~ 141 (196)
T 2q5c_A 69 VSIPSISIKVTR--FDTMRAVYNAKRFG--NELALI--AYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTE 141 (196)
T ss_dssp CSSCEEEECCCH--HHHHHHHHHHGGGC--SEEEEE--EESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHT
T ss_pred CCCCEEEECCCH--HHHHHHHHHHHHHC--CCEEEE--ECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf 899779980788--79999999999758--978999--67850158999999859955999966889999999999986