Query gi|254780157|ref|YP_003064570.1| phosphoribosylaminoimidazole carboxylase catalytic subunit protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 165
No_of_seqs 128 out of 2082
Neff 4.9
Searched_HMMs 23785
Date Sun May 22 18:19:09 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780157.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oow_A Phosphoribosylaminoimid 100.0 0 0 410.2 16.3 163 2-164 3-165 (166)
2 3kuu_A Phosphoribosylaminoimid 100.0 0 0 406.6 16.8 162 3-164 11-172 (174)
3 1xmp_A PURE, phosphoribosylami 100.0 0 0 399.0 16.5 163 1-163 8-170 (170)
4 1u11_A PURE (N5-carboxyaminoim 100.0 0 0 400.9 15.0 158 3-160 20-177 (182)
5 3lp6_A Phosphoribosylaminoimid 100.0 0 0 396.5 17.3 161 2-164 5-165 (174)
6 1o4v_A Phosphoribosylaminoimid 100.0 0 0 385.6 17.3 159 4-164 13-171 (183)
7 2h31_A Multifunctional protein 100.0 0 0 377.0 16.6 159 2-165 263-422 (425)
8 2ywx_A Phosphoribosylaminoimid 100.0 0 0 368.2 16.3 153 6-164 1-153 (157)
9 1jq5_A Glycerol dehydrogenase; 97.2 0.00075 3.2E-08 45.0 6.3 90 5-94 32-122 (370)
10 1o2d_A Alcohol dehydrogenase, 96.9 0.0039 1.7E-07 40.3 7.7 90 5-94 41-152 (371)
11 1vlj_A NADH-dependent butanol 96.7 0.0065 2.7E-07 38.9 7.8 90 5-94 44-155 (407)
12 1ta9_A Glycerol dehydrogenase; 96.6 0.0032 1.4E-07 40.9 5.8 89 5-94 92-181 (450)
13 1rrm_A Lactaldehyde reductase; 96.6 0.0032 1.3E-07 40.9 5.6 90 5-94 32-144 (386)
14 2q5c_A NTRC family transcripti 96.6 0.0098 4.1E-07 37.7 8.0 133 1-151 1-141 (196)
15 3bfj_A 1,3-propanediol oxidore 95.9 0.025 1E-06 35.2 7.0 91 5-95 34-147 (387)
16 2bon_A Lipid kinase; DAG kinas 95.7 0.06 2.5E-06 32.6 8.4 87 1-91 26-118 (332)
17 3ce9_A Glycerol dehydrogenase; 95.4 0.03 1.3E-06 34.6 5.9 88 5-93 35-123 (354)
18 3jzd_A Iron-containing alcohol 95.3 0.029 1.2E-06 34.7 5.5 87 5-93 37-124 (358)
19 2gru_A 2-deoxy-scyllo-inosose 95.2 0.2 8.3E-06 29.3 9.8 87 4-91 34-129 (368)
20 3okf_A 3-dehydroquinate syntha 95.0 0.17 7.3E-06 29.7 8.8 88 4-91 62-158 (390)
21 1oj7_A Hypothetical oxidoreduc 94.9 0.043 1.8E-06 33.6 5.4 89 4-94 50-163 (408)
22 3lft_A Uncharacterized protein 94.9 0.09 3.8E-06 31.5 7.0 88 4-91 2-94 (295)
23 3iv7_A Alcohol dehydrogenase I 94.8 0.054 2.3E-06 32.9 5.7 85 5-93 38-123 (364)
24 3hl0_A Maleylacetate reductase 94.2 0.1 4.2E-06 31.2 6.0 87 5-93 35-122 (353)
25 2qv7_A Diacylglycerol kinase D 94.0 0.2 8.3E-06 29.3 7.2 85 3-91 23-114 (337)
26 1pfk_A Phosphofructokinase; tr 93.8 0.17 7.3E-06 29.7 6.6 89 3-92 1-127 (320)
27 1xah_A Sadhqs, 3-dehydroquinat 93.1 0.099 4.1E-06 31.3 4.4 89 5-93 32-125 (354)
28 2fn9_A Ribose ABC transporter, 92.9 0.58 2.4E-05 26.3 10.7 84 3-88 1-89 (290)
29 3l6u_A ABC-type sugar transpor 91.7 0.83 3.5E-05 25.3 10.5 85 3-89 7-96 (293)
30 2pju_A Propionate catabolism o 91.6 0.84 3.5E-05 25.2 8.5 132 4-151 13-153 (225)
31 3lyl_A 3-oxoacyl-(acyl-carrier 90.8 1 4.2E-05 24.7 8.5 56 1-62 1-56 (247)
32 2vk2_A YTFQ, ABC transporter p 90.0 1.2 4.9E-05 24.3 9.8 83 5-89 2-90 (306)
33 1kq3_A Glycerol dehydrogenase; 89.9 0.024 1E-06 35.3 -1.5 87 5-94 42-130 (376)
34 1sg6_A Pentafunctional AROM po 89.7 0.49 2.1E-05 26.7 5.0 88 4-91 36-140 (393)
35 3osu_A 3-oxoacyl-[acyl-carrier 89.5 1.3 5.4E-05 24.1 8.2 30 1-33 1-30 (246)
36 1iow_A DD-ligase, DDLB, D-ALA\ 89.0 0.42 1.8E-05 27.2 4.3 84 3-95 1-93 (306)
37 3l49_A ABC sugar (ribose) tran 88.8 1.4 6E-05 23.7 12.4 84 5-90 6-94 (291)
38 1v4v_A UDP-N-acetylglucosamine 88.4 0.9 3.8E-05 25.0 5.6 42 2-44 4-46 (376)
39 2b99_A Riboflavin synthase; lu 88.1 1.2 5E-05 24.2 6.1 116 3-135 1-131 (156)
40 2bd0_A Sepiapterin reductase; 87.8 1.7 6.9E-05 23.3 8.9 55 6-62 3-60 (244)
41 2qh8_A Uncharacterized protein 87.0 1.8 7.7E-05 23.0 8.7 82 1-86 5-94 (302)
42 2q62_A ARSH; alpha/beta, flavo 86.7 1.9 8E-05 22.9 12.5 78 2-80 32-120 (247)
43 3h7a_A Short chain dehydrogena 86.1 2 8.6E-05 22.7 6.3 64 1-70 1-66 (252)
44 3beo_A UDP-N-acetylglucosamine 85.8 1.9 7.9E-05 23.0 6.1 52 1-54 3-58 (375)
45 1zxx_A 6-phosphofructokinase; 85.0 1.7 7E-05 23.3 5.5 121 5-131 2-178 (319)
46 1zl0_A Hypothetical protein PA 84.2 2.5 0.0001 22.2 7.0 67 6-72 19-93 (311)
47 3g23_A Peptidase U61, LD-carbo 83.5 2.7 0.00011 22.0 6.6 71 3-73 2-82 (274)
48 3hcw_A Maltose operon transcri 81.2 3.2 0.00014 21.4 8.4 83 2-88 5-97 (295)
49 3ist_A Glutamate racemase; str 80.1 3.5 0.00015 21.2 6.0 87 3-91 4-100 (269)
50 2gm3_A Unknown protein; AT3G01 79.0 3.8 0.00016 21.0 8.0 71 19-93 88-166 (175)
51 3m9w_A D-xylose-binding peripl 78.5 3.9 0.00017 20.9 9.4 83 4-88 2-89 (313)
52 1tjy_A Sugar transport protein 78.4 4 0.00017 20.9 9.3 86 4-90 3-93 (316)
53 3ezl_A Acetoacetyl-COA reducta 78.2 3.5 0.00015 21.2 5.1 68 1-70 9-102 (256)
54 1yo6_A Putative carbonyl reduc 78.1 2 8.5E-05 22.8 3.9 65 3-71 1-93 (250)
55 3out_A Glutamate racemase; str 78.1 2 8.3E-05 22.8 3.8 88 1-91 5-103 (268)
56 2x7x_A Sensor protein; transfe 77.9 4.1 0.00017 20.8 7.1 86 1-89 1-94 (325)
57 3m1a_A Putative dehydrogenase; 76.0 4.6 0.00019 20.4 5.6 68 1-70 1-90 (281)
58 3gbv_A Putative LACI-family tr 75.7 4.7 0.0002 20.4 12.8 132 4-154 8-167 (304)
59 1fmc_A 7 alpha-hydroxysteroid 75.4 4.8 0.0002 20.3 7.6 67 1-70 7-99 (255)
60 3gr6_A Enoyl-[acyl-carrier-pro 74.9 4.9 0.00021 20.2 5.8 55 1-59 6-60 (260)
61 3ksm_A ABC-type sugar transpor 74.6 5 0.00021 20.2 9.2 86 5-90 1-92 (276)
62 1g94_A Alpha-amylase; beta-alp 74.2 5.1 0.00022 20.1 5.7 63 4-66 1-85 (448)
63 2oho_A Glutamate racemase; iso 72.1 2.6 0.00011 22.0 3.2 86 1-89 10-105 (273)
64 3gx8_A Monothiol glutaredoxin- 71.9 5.8 0.00024 19.8 5.6 79 4-106 15-96 (121)
65 3ftp_A 3-oxoacyl-[acyl-carrier 71.6 5.9 0.00025 19.8 7.5 48 3-56 26-73 (270)
66 3dlo_A Universal stress protei 70.3 6.3 0.00026 19.6 5.0 48 19-68 79-126 (155)
67 2ahe_A Chloride intracellular 69.5 6.5 0.00027 19.5 5.5 49 2-50 14-68 (267)
68 3dzc_A UDP-N-acetylglucosamine 68.5 6.9 0.00029 19.3 6.0 86 4-89 25-142 (396)
69 3gjz_A Microcin immunity prote 67.9 7 0.0003 19.3 6.8 97 6-111 15-130 (336)
70 2cq9_A GLRX2 protein, glutared 67.5 7.2 0.0003 19.2 5.5 76 5-106 27-102 (130)
71 3d54_D Phosphoribosylformylgly 67.2 2.8 0.00012 21.9 2.4 30 3-36 1-32 (213)
72 1gud_A ALBP, D-allose-binding 67.2 7.3 0.00031 19.2 10.2 87 6-92 3-94 (288)
73 2h3h_A Sugar ABC transporter, 67.1 7.3 0.00031 19.2 9.1 81 6-89 3-89 (313)
74 3e9n_A Putative short-chain de 66.6 7.5 0.00031 19.1 4.7 46 1-53 1-46 (245)
75 3fvw_A Putative NAD(P)H-depend 66.6 7.5 0.00031 19.1 9.5 148 3-158 1-184 (192)
76 2zki_A 199AA long hypothetical 65.9 7.3 0.00031 19.2 4.4 38 1-38 1-39 (199)
77 3ot5_A UDP-N-acetylglucosamine 65.6 7.8 0.00033 19.0 5.5 85 3-87 25-143 (403)
78 2ae2_A Protein (tropinone redu 65.2 7.9 0.00033 18.9 9.1 54 2-61 6-59 (260)
79 3ojf_A Enoyl-[acyl-carrier-pro 65.1 8 0.00034 18.9 6.2 71 1-71 1-98 (257)
80 2vvt_A Glutamate racemase; iso 64.7 8.1 0.00034 18.9 5.4 86 1-88 21-116 (290)
81 1zem_A Xylitol dehydrogenase; 64.7 8.1 0.00034 18.9 8.7 53 3-61 5-57 (262)
82 2ht9_A Glutaredoxin-2; thiored 64.4 8.2 0.00035 18.8 6.4 76 5-106 49-124 (146)
83 2fzv_A Putative arsenical resi 64.1 8.3 0.00035 18.8 9.7 143 4-154 58-231 (279)
84 3edm_A Short chain dehydrogena 63.3 8.6 0.00036 18.7 7.4 68 1-70 1-97 (259)
85 3jy6_A Transcriptional regulat 63.1 8.7 0.00037 18.7 13.1 82 3-89 6-92 (276)
86 3cfy_A Putative LUXO repressor 62.8 8.8 0.00037 18.6 4.8 56 1-67 1-56 (137)
87 1um0_A Chorismate synthase; be 62.7 4.1 0.00017 20.8 2.6 93 22-128 138-256 (365)
88 3imf_A Short chain dehydrogena 62.0 9.1 0.00038 18.5 7.7 66 2-70 3-94 (257)
89 1geg_A Acetoin reductase; SDR 61.7 9.2 0.00039 18.5 8.5 62 6-70 3-90 (256)
90 2dy0_A APRT, adenine phosphori 61.7 4.1 0.00017 20.7 2.5 79 13-92 4-96 (190)
91 1xmx_A Hypothetical protein VC 61.4 9.3 0.00039 18.5 7.0 91 3-93 26-123 (385)
92 1q1l_A Chorismate synthase; be 60.3 9.7 0.00041 18.3 5.5 88 22-127 151-278 (401)
93 3mgk_A Intracellular protease/ 60.3 8.7 0.00036 18.7 3.9 44 1-45 1-45 (211)
94 3a28_C L-2.3-butanediol dehydr 60.1 9.8 0.00041 18.3 8.7 61 6-70 3-92 (258)
95 3h8q_A Thioredoxin reductase 3 59.8 9.9 0.00042 18.3 6.3 74 5-104 17-90 (114)
96 3bcv_A Putative glycosyltransf 59.5 9.4 0.0004 18.4 4.0 53 1-53 1-57 (240)
97 2hig_A 6-phospho-1-fructokinas 59.3 6 0.00025 19.7 3.0 86 5-92 98-228 (487)
98 1xq1_A Putative tropinone redu 59.3 10 0.00042 18.2 8.4 54 2-61 11-64 (266)
99 1rtt_A Conserved hypothetical 59.2 10 0.00043 18.2 9.4 150 1-159 3-185 (193)
100 2wci_A Glutaredoxin-4; redox-a 58.7 10 0.00043 18.2 7.0 74 5-105 35-111 (135)
101 3brs_A Periplasmic binding pro 58.6 10 0.00044 18.2 12.8 132 5-154 6-159 (289)
102 2qq5_A DHRS1, dehydrogenase/re 58.6 10 0.00044 18.2 7.8 28 3-32 3-30 (260)
103 3a06_A 1-deoxy-D-xylulose 5-ph 58.1 11 0.00044 18.1 8.8 51 3-56 1-51 (376)
104 2e7p_A Glutaredoxin; thioredox 58.1 11 0.00044 18.1 6.4 75 6-106 21-95 (116)
105 1zuw_A Glutamate racemase 1; ( 57.9 8.7 0.00037 18.7 3.6 86 1-89 1-97 (272)
106 2zat_A Dehydrogenase/reductase 57.0 11 0.00046 18.0 8.2 66 3-71 12-103 (260)
107 1ulu_A Enoyl-acyl carrier prot 57.0 11 0.00046 18.0 6.2 70 1-70 4-97 (261)
108 1mjh_A Protein (ATP-binding do 56.8 11 0.00047 18.0 9.0 65 24-92 89-161 (162)
109 1wik_A Thioredoxin-like protei 56.4 11 0.00047 17.9 6.0 77 3-106 13-92 (109)
110 1b73_A Glutamate racemase; iso 56.2 9 0.00038 18.6 3.4 83 6-90 2-94 (254)
111 1lyp_A CAP18; lipopolysacchari 55.5 6.5 0.00027 19.5 2.6 24 141-164 2-25 (32)
112 3gaf_A 7-alpha-hydroxysteroid 54.3 12 0.00051 17.7 8.6 68 2-70 9-100 (256)
113 1hx0_A Alpha amylase (PPA); in 53.4 12 0.00051 17.7 3.7 55 12-66 17-97 (496)
114 1ae1_A Tropinone reductase-I; 53.4 13 0.00053 17.6 9.0 54 2-61 18-71 (273)
115 8abp_A L-arabinose-binding pro 53.3 13 0.00053 17.6 13.1 84 4-90 2-90 (306)
116 3op4_A 3-oxoacyl-[acyl-carrier 52.7 13 0.00054 17.5 6.9 64 1-70 5-94 (248)
117 1pq4_A Periplasmic binding pro 51.3 14 0.00057 17.4 5.3 31 59-89 51-83 (291)
118 3ksu_A 3-oxoacyl-acyl carrier 50.5 14 0.00059 17.3 8.3 67 1-70 7-102 (262)
119 3gfs_A FMN-dependent NADPH-azo 50.5 14 0.00059 17.3 10.3 143 6-156 2-167 (174)
120 2i0f_A 6,7-dimethyl-8-ribityll 49.8 14 0.0006 17.3 7.4 64 3-66 11-80 (157)
121 3clh_A 3-dehydroquinate syntha 49.7 6 0.00025 19.7 1.7 85 5-91 27-120 (343)
122 1lu9_A Methylene tetrahydromet 49.5 14 0.00061 17.2 8.3 61 2-68 116-197 (287)
123 2jah_A Clavulanic acid dehydro 49.5 14 0.00061 17.2 8.8 28 3-32 5-32 (247)
124 1tvm_A PTS system, galactitol- 49.2 15 0.00061 17.2 5.5 71 3-89 20-92 (113)
125 1d7o_A Enoyl-[acyl-carrier pro 49.2 15 0.00062 17.2 3.9 34 1-34 4-37 (297)
126 3hno_A Pyrophosphate-dependent 48.9 13 0.00053 17.6 3.2 54 46-100 91-158 (419)
127 2an1_A Putative kinase; struct 48.6 12 0.0005 17.8 3.0 85 1-91 1-96 (292)
128 1ydg_A Trp repressor binding p 48.0 15 0.00064 17.1 4.9 38 1-38 1-42 (211)
129 2f48_A Diphosphate--fructose-6 47.6 15 0.00065 17.0 3.7 49 43-92 150-205 (555)
130 2jfq_A Glutamate racemase; cel 47.4 16 0.00065 17.0 5.8 85 3-89 21-115 (286)
131 1f4p_A Flavodoxin; electron tr 47.2 16 0.00066 17.0 4.5 34 5-38 1-36 (147)
132 2z1n_A Dehydrogenase; reductas 47.1 16 0.00066 17.0 8.1 31 1-33 3-33 (260)
133 3ipz_A Monothiol glutaredoxin- 47.1 16 0.00066 17.0 7.8 76 4-106 17-95 (109)
134 1uls_A Putative 3-oxoacyl-acyl 47.1 16 0.00066 17.0 6.6 68 1-70 1-88 (245)
135 3ic4_A Glutaredoxin (GRX-1); s 46.9 16 0.00067 17.0 5.8 35 4-40 11-45 (92)
136 3msz_A Glutaredoxin 1; alpha-b 46.7 16 0.00067 16.9 5.2 78 4-103 3-80 (89)
137 2hqb_A Transcriptional activat 46.2 16 0.00068 16.9 7.1 92 1-95 123-217 (296)
138 3cxt_A Dehydrogenase with diff 46.2 16 0.00068 16.9 8.1 65 3-70 32-122 (291)
139 1j8f_A SIRT2, sirtuin 2, isofo 46.0 8.7 0.00037 18.6 2.0 29 43-72 29-57 (323)
140 2h0a_A TTHA0807, transcription 46.0 16 0.00069 16.9 7.1 80 7-89 2-85 (276)
141 3g85_A Transcriptional regulat 45.9 16 0.00069 16.9 9.1 129 3-154 10-155 (289)
142 1u0t_A Inorganic polyphosphate 45.8 16 0.00069 16.9 4.3 90 1-91 1-108 (307)
143 1dbq_A Purine repressor; trans 45.5 17 0.0007 16.8 10.0 85 3-89 6-94 (289)
144 2g7z_A Conserved hypothetical 45.1 17 0.00071 16.8 5.0 27 2-33 2-28 (282)
145 2jfn_A Glutamate racemase; cel 44.9 6.1 0.00025 19.7 1.1 88 2-91 19-117 (285)
146 2c07_A 3-oxoacyl-(acyl-carrier 44.8 17 0.00072 16.8 7.9 67 3-70 42-132 (285)
147 2rhc_B Actinorhodin polyketide 44.8 17 0.00072 16.8 9.0 66 4-70 21-110 (277)
148 1r0k_A 1-deoxy-D-xylulose 5-ph 44.7 17 0.00072 16.8 9.2 52 1-55 1-52 (388)
149 1bdb_A CIS-biphenyl-2,3-dihydr 44.7 17 0.00072 16.8 7.2 48 1-54 1-48 (277)
150 2a5l_A Trp repressor binding p 44.5 17 0.00073 16.7 5.1 35 4-38 5-41 (200)
151 2fvy_A D-galactose-binding per 44.4 17 0.00073 16.7 13.6 84 5-90 3-92 (309)
152 1vmd_A MGS, methylglyoxal synt 44.4 8.6 0.00036 18.7 1.8 144 3-162 26-176 (178)
153 3g1w_A Sugar ABC transporter; 44.1 18 0.00074 16.7 12.2 87 2-89 2-93 (305)
154 1qsg_A Enoyl-[acyl-carrier-pro 43.5 18 0.00075 16.6 5.1 32 3-34 7-38 (265)
155 2hze_A Glutaredoxin-1; thiored 43.4 18 0.00075 16.6 6.5 76 4-105 18-96 (114)
156 3d02_A Putative LACI-type tran 43.3 18 0.00076 16.6 6.3 84 6-91 6-95 (303)
157 2qxy_A Response regulator; reg 43.1 18 0.00076 16.6 7.2 55 1-66 1-55 (142)
158 3pfk_A Phosphofructokinase; tr 43.1 18 0.00076 16.6 5.1 87 5-92 2-126 (319)
159 2dwu_A Glutamate racemase; iso 42.8 18 0.00077 16.6 3.5 86 2-89 5-100 (276)
160 1jmv_A USPA, universal stress 42.0 19 0.00079 16.5 6.2 67 22-91 68-139 (141)
161 3f9i_A 3-oxoacyl-[acyl-carrier 41.3 19 0.00081 16.4 6.1 49 1-55 10-58 (249)
162 2hq1_A Glucose/ribitol dehydro 41.3 19 0.00081 16.4 7.8 67 1-70 1-94 (247)
163 2qu7_A Putative transcriptiona 41.2 19 0.00081 16.4 9.8 81 4-89 8-91 (288)
164 1vgv_A UDP-N-acetylglucosamine 41.1 19 0.00082 16.4 6.1 83 6-88 2-116 (384)
165 3glr_A NAD-dependent deacetyla 41.0 12 0.00049 17.8 2.1 28 44-72 10-37 (285)
166 1yb1_A 17-beta-hydroxysteroid 40.9 20 0.00082 16.4 8.8 67 3-70 29-119 (272)
167 3fst_A 5,10-methylenetetrahydr 40.8 20 0.00082 16.4 7.3 59 12-70 63-121 (304)
168 3ioy_A Short-chain dehydrogena 40.5 20 0.00083 16.3 6.3 68 1-70 1-98 (319)
169 1e2b_A Enzyme IIB-cellobiose; 39.6 20 0.00086 16.3 5.6 77 5-90 4-81 (106)
170 1nw9_B Caspase 9, apoptosis-re 39.0 21 0.00088 16.2 5.5 70 1-70 16-101 (277)
171 3kke_A LACI family transcripti 38.7 21 0.00089 16.2 9.3 83 4-89 15-101 (303)
172 1byk_A Protein (trehalose oper 38.5 21 0.00089 16.1 10.3 81 4-88 2-85 (255)
173 3m0f_A Uncharacterized protein 38.3 21 0.0009 16.1 5.1 40 10-50 5-44 (213)
174 2prs_A High-affinity zinc upta 38.0 22 0.00091 16.1 6.8 41 44-90 39-80 (284)
175 3d3j_A Enhancer of mRNA-decapp 37.9 22 0.00091 16.1 6.7 91 3-93 131-245 (306)
176 3nzn_A Glutaredoxin; structura 37.8 21 0.00087 16.2 2.9 34 4-39 21-54 (103)
177 3p2o_A Bifunctional protein fo 37.4 22 0.00093 16.0 6.6 66 4-69 33-101 (285)
178 2klx_A Glutaredoxin; thioredox 37.3 22 0.00093 16.0 3.2 74 2-106 4-77 (89)
179 3oec_A Carveol dehydrogenase ( 36.9 23 0.00095 16.0 8.4 65 3-70 44-146 (317)
180 1sby_A Alcohol dehydrogenase; 36.8 23 0.00095 16.0 8.8 67 1-69 1-94 (254)
181 2pfs_A USP, universal stress p 36.7 23 0.00096 16.0 6.7 41 51-91 101-148 (150)
182 3afn_B A1-R, 4-deoxy-L-erythro 36.5 23 0.00096 15.9 6.4 67 2-70 4-96 (258)
183 3egl_A DEGV family protein; al 36.1 23 0.00098 15.9 8.3 117 6-151 5-136 (277)
184 1a4i_A Methylenetetrahydrofola 35.8 23 0.00099 15.9 6.2 32 38-74 192-223 (301)
185 2jfz_A Glutamate racemase; cel 35.6 20 0.00086 16.3 2.6 83 6-90 2-94 (255)
186 2i2c_A Probable inorganic poly 35.5 24 0.001 15.8 3.6 62 7-90 3-69 (272)
187 1sq1_A Chorismate synthase; st 35.2 24 0.001 15.8 4.9 88 22-127 137-252 (370)
188 3lf2_A Short chain oxidoreduct 35.0 24 0.001 15.8 8.5 47 2-54 5-51 (265)
189 2dbq_A Glyoxylate reductase; D 34.9 24 0.001 15.8 7.4 115 3-136 1-115 (334)
190 2wsb_A Galactitol dehydrogenas 34.8 24 0.001 15.8 6.9 67 2-70 8-96 (254)
191 2g76_A 3-PGDH, D-3-phosphoglyc 34.7 24 0.001 15.8 7.9 127 1-153 23-149 (335)
192 2dtx_A Glucose 1-dehydrogenase 34.7 24 0.001 15.8 7.2 68 2-71 5-86 (264)
193 1oaa_A Sepiapterin reductase; 34.6 24 0.001 15.7 8.9 51 2-56 3-54 (259)
194 1ujn_A Dehydroquinate synthase 34.5 25 0.001 15.7 6.1 83 5-91 29-119 (348)
195 3k4h_A Putative transcriptiona 34.2 25 0.001 15.7 8.9 83 2-88 6-98 (292)
196 3n74_A 3-ketoacyl-(acyl-carrie 34.0 25 0.0011 15.7 6.8 68 1-70 5-94 (261)
197 2fb9_A D-alanine:D-alanine lig 33.5 11 0.00046 18.0 1.0 38 1-39 1-40 (322)
198 2qjg_A Putative aldolase MJ040 33.3 26 0.0011 15.6 6.6 108 6-116 117-236 (273)
199 3nyw_A Putative oxidoreductase 33.3 26 0.0011 15.6 6.6 31 1-33 3-33 (250)
200 1k2w_A Sorbitol dehydrogenase; 33.2 26 0.0011 15.6 7.1 67 1-70 1-90 (256)
201 1qxo_A Chorismate synthase; be 33.1 26 0.0011 15.6 5.9 88 22-127 145-265 (388)
202 1fov_A Glutaredoxin 3, GRX3; a 32.9 26 0.0011 15.6 5.7 69 11-106 5-73 (82)
203 3em5_A Beta-1,3-glucanase; gly 32.8 26 0.0011 15.6 4.5 54 7-67 2-56 (316)
204 1uta_A FTSN, MSGA, cell divisi 32.4 27 0.0011 15.5 3.3 64 6-69 9-81 (81)
205 1c2y_A Protein (lumazine synth 32.4 27 0.0011 15.5 6.8 61 3-66 12-78 (156)
206 3k31_A Enoyl-(acyl-carrier-pro 32.2 27 0.0011 15.5 6.1 71 1-71 26-120 (296)
207 2rhf_A DNA helicase RECQ; HRDC 32.1 25 0.0011 15.7 2.6 20 136-155 2-21 (77)
208 1cyd_A Carbonyl reductase; sho 32.1 27 0.0011 15.5 7.3 64 1-70 3-87 (244)
209 1vl8_A Gluconate 5-dehydrogena 32.1 27 0.0011 15.5 8.5 66 2-70 18-110 (267)
210 3h11_A CAsp8 and FADD-like apo 32.0 27 0.0011 15.5 5.0 71 1-74 38-114 (272)
211 2b4q_A Rhamnolipids biosynthes 31.8 27 0.0011 15.4 7.1 67 2-70 26-116 (276)
212 3cx3_A Lipoprotein; zinc-bindi 31.4 28 0.0012 15.4 6.8 60 15-81 16-81 (284)
213 1q1a_A HST2 protein; ternary c 31.3 18 0.00074 16.7 1.7 26 46-72 9-34 (289)
214 1h75_A Glutaredoxin-like prote 31.1 28 0.0012 15.4 5.5 37 13-51 7-43 (81)
215 1edo_A Beta-keto acyl carrier 31.1 28 0.0012 15.4 7.8 55 16-71 35-91 (244)
216 2i87_A D-alanine-D-alanine lig 31.1 20 0.00085 16.3 2.0 33 1-34 1-38 (364)
217 1spx_A Short-chain reductase f 30.7 28 0.0012 15.3 6.4 66 3-70 4-97 (278)
218 2cyg_A Beta-1, 3-glucananse; e 30.3 29 0.0012 15.3 4.8 54 7-67 1-55 (312)
219 3nhm_A Response regulator; pro 30.3 29 0.0012 15.3 6.6 58 1-70 1-58 (133)
220 1wma_A Carbonyl reductase [NAD 30.1 29 0.0012 15.3 7.1 54 17-71 39-94 (276)
221 2uvd_A 3-oxoacyl-(acyl-carrier 30.0 29 0.0012 15.3 8.0 54 16-70 38-93 (246)
222 1jay_A Coenzyme F420H2:NADP+ o 30.0 29 0.0012 15.3 5.2 48 6-60 2-49 (212)
223 1jae_A Alpha-amylase; glycosid 29.9 29 0.0012 15.3 2.6 61 6-66 10-95 (471)
224 2khp_A Glutaredoxin; thioredox 29.7 29 0.0012 15.2 6.2 71 6-105 7-77 (92)
225 3icc_A Putative 3-oxoacyl-(acy 29.6 30 0.0012 15.2 7.8 29 3-33 5-33 (255)
226 2bgk_A Rhizome secoisolaricire 29.4 30 0.0013 15.2 7.7 29 3-33 14-42 (278)
227 2hjh_A NAD-dependent histone d 29.2 24 0.001 15.8 2.1 29 41-72 32-60 (354)
228 3iaa_A CALG2; glycosyltransfer 29.1 30 0.0013 15.2 5.9 132 4-154 247-397 (416)
229 3d3k_A Enhancer of mRNA-decapp 28.8 31 0.0013 15.1 6.6 91 3-93 84-198 (259)
230 3opy_A 6-phosphofructo-1-kinas 28.7 31 0.0013 15.1 3.8 23 46-68 291-313 (989)
231 3ff4_A Uncharacterized protein 28.6 31 0.0013 15.1 5.4 32 2-33 2-33 (122)
232 3miz_A Putative transcriptiona 28.6 31 0.0013 15.1 8.4 132 4-156 13-161 (301)
233 1eto_A FIS, factor for inversi 28.6 22 0.00091 16.1 1.8 22 128-149 75-96 (98)
234 3fni_A Putative diflavin flavo 28.5 31 0.0013 15.1 13.2 46 3-48 3-50 (159)
235 2pnf_A 3-oxoacyl-[acyl-carrier 28.5 31 0.0013 15.1 8.0 67 1-70 3-96 (248)
236 2p91_A Enoyl-[acyl-carrier-pro 28.5 31 0.0013 15.1 5.4 69 3-71 19-111 (285)
237 2gt1_A Lipopolysaccharide hept 28.4 16 0.00066 17.0 1.0 71 3-89 209-279 (326)
238 1xg5_A ARPG836; short chain de 28.3 31 0.0013 15.1 8.7 66 3-70 30-122 (279)
239 1tk9_A Phosphoheptose isomeras 28.3 26 0.0011 15.6 2.2 36 45-80 28-63 (188)
240 1gee_A Glucose 1-dehydrogenase 28.2 31 0.0013 15.1 7.8 68 3-71 5-97 (261)
241 1ma3_A SIR2-AF2, transcription 27.9 32 0.0013 15.0 3.4 14 59-72 16-29 (253)
242 1bvy_F Protein (cytochrome P45 27.3 32 0.0014 15.0 4.5 125 6-158 23-168 (191)
243 3ia7_A CALG4; glycosysltransfe 27.3 32 0.0014 15.0 5.4 132 4-153 231-381 (402)
244 2pd6_A Estradiol 17-beta-dehyd 26.8 33 0.0014 14.9 6.2 62 3-70 5-103 (264)
245 3idf_A USP-like protein; unive 26.8 33 0.0014 14.9 4.8 48 20-73 68-115 (138)
246 3loq_A Universal stress protei 26.6 33 0.0014 14.9 9.9 70 20-93 88-165 (294)
247 3i12_A D-alanine-D-alanine lig 26.5 32 0.0014 15.0 2.4 32 1-33 1-37 (364)
248 3e61_A Putative transcriptiona 26.4 34 0.0014 14.9 7.6 84 4-90 8-94 (277)
249 3l07_A Bifunctional protein fo 26.2 34 0.0014 14.8 7.3 70 4-73 34-106 (285)
250 3cne_A Putative protease I; st 26.1 34 0.0014 14.8 5.2 38 3-40 1-38 (175)
251 3gi1_A LBP, laminin-binding pr 26.1 34 0.0014 14.8 7.5 58 14-80 17-82 (286)
252 2c2x_A Methylenetetrahydrofola 26.0 34 0.0014 14.8 6.6 71 3-73 31-104 (281)
253 1nff_A Putative oxidoreductase 26.0 34 0.0014 14.8 6.7 45 3-53 5-49 (260)
254 3nrc_A Enoyl-[acyl-carrier-pro 25.9 34 0.0014 14.8 5.8 50 3-54 24-73 (280)
255 2a4k_A 3-oxoacyl-[acyl carrier 25.6 35 0.0015 14.8 5.9 47 1-53 1-48 (263)
256 3k35_A Mono-ADP-ribosyltransfe 25.4 35 0.0015 14.7 3.1 40 50-106 36-75 (318)
257 1h5q_A NADP-dependent mannitol 25.4 35 0.0015 14.7 7.0 67 1-70 10-103 (265)
258 3h11_B Caspase-8; cell death, 25.1 35 0.0015 14.7 6.9 75 1-75 12-109 (271)
259 2pjk_A 178AA long hypothetical 24.9 36 0.0015 14.7 7.9 67 4-72 15-94 (178)
260 1ntc_A Protein (nitrogen regul 24.7 32 0.0014 15.0 2.1 22 129-150 69-90 (91)
261 1e4e_A Vancomycin/teicoplanin 24.7 28 0.0012 15.4 1.8 32 1-33 1-37 (343)
262 2cfc_A 2-(R)-hydroxypropyl-COM 24.6 36 0.0015 14.6 5.6 64 6-71 3-92 (250)
263 3lwb_A D-alanine--D-alanine li 24.4 37 0.0015 14.6 2.5 30 2-31 8-42 (373)
264 3op6_A Uncharacterized protein 24.3 37 0.0015 14.6 3.7 41 21-61 5-45 (152)
265 1ex2_A Protein MAF; structural 24.2 37 0.0015 14.6 2.7 39 9-52 5-49 (189)
266 2z0x_A Putative uncharacterize 23.9 37 0.0016 14.6 4.5 51 15-65 2-54 (158)
267 1ja9_A 4HNR, 1,3,6,8-tetrahydr 23.7 38 0.0016 14.5 7.7 54 16-70 55-110 (274)
268 2b4y_A NAD-dependent deacetyla 23.7 38 0.0016 14.5 2.3 26 44-72 8-33 (271)
269 3eeq_A Putative cobalamin bios 23.3 38 0.0016 14.5 4.4 120 4-131 8-138 (336)
270 1xp2_A EAD500, PLY500, L-alany 23.3 38 0.0016 14.5 3.0 60 16-77 34-97 (179)
271 1m2k_A Silent information regu 23.2 39 0.0016 14.5 2.5 23 47-72 4-26 (249)
272 1yc5_A NAD-dependent deacetyla 23.2 26 0.0011 15.6 1.4 24 46-72 4-27 (246)
273 1lxn_A Hypothetical protein MT 23.0 39 0.0016 14.4 2.7 50 7-56 6-61 (99)
274 2xed_A Putative maleate isomer 22.9 39 0.0016 14.4 6.1 14 137-150 155-168 (273)
275 3kzv_A Uncharacterized oxidore 22.9 39 0.0016 14.4 8.5 64 6-71 3-90 (254)
276 1kjq_A GART 2, phosphoribosylg 22.9 39 0.0016 14.4 6.0 104 4-116 11-131 (391)
277 1k0m_A CLIC1, NCC27, chloride 22.7 39 0.0017 14.4 5.4 47 3-49 4-56 (241)
278 3gvc_A Oxidoreductase, probabl 22.6 40 0.0017 14.4 6.7 65 3-70 27-114 (277)
279 3fz9_A Glutaredoxin; oxidoredu 22.5 40 0.0017 14.4 5.9 74 6-105 19-93 (112)
280 3i1j_A Oxidoreductase, short c 22.4 40 0.0017 14.4 6.7 28 3-32 12-39 (247)
281 1w0m_A TIM, triosephosphate is 22.4 40 0.0017 14.4 5.3 104 24-132 78-193 (226)
282 3ek2_A Enoyl-(acyl-carrier-pro 22.2 40 0.0017 14.3 5.3 32 3-34 12-43 (271)
283 1aq0_A 1,3-1,4-beta-glucanase; 22.1 41 0.0017 14.3 4.3 54 7-67 1-55 (306)
284 1mkz_A Molybdenum cofactor bio 21.9 41 0.0017 14.3 8.1 67 5-73 11-83 (172)
285 3guy_A Short-chain dehydrogena 21.8 41 0.0017 14.3 4.9 44 6-55 2-45 (230)
286 1psw_A ADP-heptose LPS heptosy 21.7 29 0.0012 15.3 1.3 27 58-88 260-286 (348)
287 1umq_A Photosynthetic apparatu 21.5 26 0.0011 15.6 1.1 21 129-149 59-79 (81)
288 3lyk_A Stringent starvation pr 21.4 42 0.0018 14.2 4.8 42 1-44 1-43 (216)
289 1b0a_A Protein (fold bifunctio 21.3 42 0.0018 14.2 5.8 36 20-55 51-86 (288)
290 3jwp_A Transcriptional regulat 21.1 42 0.0018 14.2 2.7 26 44-72 9-34 (265)
291 2yva_A DNAA initiator-associat 20.9 43 0.0018 14.2 3.0 39 53-91 35-82 (196)
292 1gdt_A GD resolvase, protein ( 20.8 43 0.0018 14.2 3.0 53 11-63 39-91 (183)
293 2qzj_A Two-component response 20.7 43 0.0018 14.1 7.0 58 1-69 1-58 (136)
294 2pbq_A Molybdenum cofactor bio 20.7 43 0.0018 14.1 7.9 127 4-134 5-148 (178)
295 1r7h_A NRDH-redoxin; thioredox 20.6 43 0.0018 14.1 5.6 38 10-49 4-41 (75)
296 3kto_A Response regulator rece 20.5 44 0.0018 14.1 3.4 54 1-65 3-56 (136)
297 1wta_A 5'-methylthioadenosine 20.4 35 0.0015 14.7 1.6 13 2-14 9-21 (275)
298 1yy7_A SSPA, stringent starvat 20.4 44 0.0018 14.1 4.4 43 8-51 11-53 (213)
299 1xhl_A Short-chain dehydrogena 20.2 44 0.0019 14.1 6.6 66 3-70 24-117 (297)
300 1vki_A Hypothetical protein AT 20.1 44 0.0019 14.1 2.4 40 16-55 17-56 (181)
301 3k1d_A 1,4-alpha-glucan-branch 20.1 45 0.0019 14.1 6.6 53 15-67 261-334 (722)
No 1
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp}
Probab=100.00 E-value=0 Score=410.24 Aligned_cols=163 Identities=56% Similarity=0.892 Sum_probs=160.2
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHC
Q ss_conf 98874999958816989999999999980998265453010387999988987653598299997267668511346522
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMT 81 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t 81 (165)
+|++||+|||||+||+++|+++.++|++|||+|+++|+||||+|+++++|++++++++++|||++|||++|||||++++|
T Consensus 3 ~~~~kV~IimGS~SD~~~~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~~~~~~~~ViIa~AG~aa~LpGvva~~t 82 (166)
T 3oow_A 3 AMSVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKT 82 (166)
T ss_dssp --CEEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHHTC
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCC
T ss_conf 89873899978786899999999999984994588888160798999999999985597499980577644541176636
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42036612577666750016998403569862044316753122899999997069999999999999999999984054
Q gi|254780157|r 82 SLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTISISEYPK 161 (165)
Q Consensus 82 ~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~~~ 161 (165)
++||||||+++++++|+|+|||++|||+||||+|+++|++|++|||++|+|||+++|++|++||++||++++++|.++++
T Consensus 83 ~~PVIgVP~~~~~l~G~d~llS~vqMP~GvPVatvavg~~~~~NAallA~~Ilal~d~~i~~~l~~yr~~~~~~v~~~~~ 162 (166)
T 3oow_A 83 TLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQHTDINIAKALAEFRAEQTRFVLENPD 162 (166)
T ss_dssp SSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88868630454567772128999709878984478627764278999999998479999999999999999999863788
Q ss_pred HCC
Q ss_conf 067
Q gi|254780157|r 162 DIP 164 (165)
Q Consensus 162 ~l~ 164 (165)
++|
T Consensus 163 ~~e 165 (166)
T 3oow_A 163 PRE 165 (166)
T ss_dssp CC-
T ss_pred CCC
T ss_conf 445
No 2
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalytic subunit PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structural genomics; 1.41A {Yersinia pestis} PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=100.00 E-value=0 Score=406.55 Aligned_cols=162 Identities=56% Similarity=0.927 Sum_probs=159.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCC
Q ss_conf 88749999588169899999999999809982654530103879999889876535982999972676685113465224
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTS 82 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~ 82 (165)
..|||+|||||+||+++|+++.++|++|||+|+++|+||||+|+++++|+++++.++++|||++||+++|||||++++|+
T Consensus 11 ~~~kV~IimGS~SD~~~~~~~~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~~~~~~~~viIa~AG~aa~LpGvvAa~T~ 90 (174)
T 3kuu_A 11 AGVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGMLAAKTL 90 (174)
T ss_dssp CCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHHHHTCS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCC
T ss_conf 89948999797868999999999999839985888870323878999999999863874999834676566304766165
Q ss_pred CCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20366125776667500169984035698620443167531228999999970699999999999999999999840540
Q gi|254780157|r 83 LPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTISISEYPKD 162 (165)
Q Consensus 83 ~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~~~~ 162 (165)
+||||||+++++++|+|+|||++|||+||||+||++|++|++|||++|+|||+++|++||+||.+||++++++|.+++++
T Consensus 91 ~PVIgvP~~~~~l~G~d~llS~vqMP~GvPVatv~i~~~ga~NAAllA~qILal~d~~i~~kL~~~r~~~~~~v~~~~~~ 170 (174)
T 3kuu_A 91 VPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILALHDTELAGRLAHWRQSQTDDVLDNPDP 170 (174)
T ss_dssp SCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTCCCT
T ss_pred CCEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 43561134445667610388997187889856886487534889999999983799999999999999999998668641
Q ss_pred CC
Q ss_conf 67
Q gi|254780157|r 163 IP 164 (165)
Q Consensus 163 l~ 164 (165)
|+
T Consensus 171 ~~ 172 (174)
T 3kuu_A 171 RE 172 (174)
T ss_dssp TS
T ss_pred CC
T ss_conf 10
No 3
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=100.00 E-value=0 Score=398.99 Aligned_cols=163 Identities=54% Similarity=0.862 Sum_probs=159.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 99887499995881698999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
..|+|+|+|||||+||+|+|+++.++|++|||+|+++|+||||+|+++++|++++++++.+|||++|||++||||+++++
T Consensus 8 ~~Mkp~V~IimGS~SD~~~~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~~~~~~~~viIa~AG~aa~LpGvvAa~ 87 (170)
T 1xmp_A 8 HHMKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAK 87 (170)
T ss_dssp ---CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHTT
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHC
T ss_conf 36787189998978469999999999998199569989816228588999999998568539998157655554235651
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 24203661257766675001699840356986204431675312289999999706999999999999999999998405
Q gi|254780157|r 81 TSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTISISEYP 160 (165)
Q Consensus 81 t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~~ 160 (165)
|++||||||+++++++|+|+||||+|||+|+||+|+++|++|++|||++|+|||+++|++|++||++||+++++++++++
T Consensus 88 t~~PVIgVP~~~~~l~G~daLlS~vqMP~GvpVatv~ig~~ga~NAallA~qIl~l~d~~i~~kl~~~r~~~~~~v~~~~ 167 (170)
T 1xmp_A 88 TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREAIEKDVREGS 167 (170)
T ss_dssp CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 48534635446756550778999971899986588877875378999999999725999999999999999999998734
Q ss_pred HHC
Q ss_conf 406
Q gi|254780157|r 161 KDI 163 (165)
Q Consensus 161 ~~l 163 (165)
+.+
T Consensus 168 ~~v 170 (170)
T 1xmp_A 168 ELV 170 (170)
T ss_dssp ---
T ss_pred CCC
T ss_conf 649
No 4
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide mutase); acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=100.00 E-value=0 Score=400.88 Aligned_cols=158 Identities=62% Similarity=0.933 Sum_probs=154.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCC
Q ss_conf 88749999588169899999999999809982654530103879999889876535982999972676685113465224
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTS 82 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~ 82 (165)
-.|+|+|||||+||+++|+++.++|++|||+|+++|+||||+|+++.+|+++++.++++|||++|||++|||||++++|+
T Consensus 20 ~~P~V~IimGS~SD~~~~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aa~LpGvva~~t~ 99 (182)
T 1u11_A 20 SAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTR 99 (182)
T ss_dssp CCCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCS
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 99969999486756999999999999849965888883304858899999999966986999933787657764001468
Q ss_pred CCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 203661257766675001699840356986204431675312289999999706999999999999999999998405
Q gi|254780157|r 83 LPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTISISEYP 160 (165)
Q Consensus 83 ~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~~ 160 (165)
+||||||+++++++|+|+|||++|||+||||+|+++|++|++|||++|+|||+++|++||+||++||++++++|.+..
T Consensus 100 ~PVIgvP~~~~~l~G~DsLlS~vqMP~GvPvatvavg~~~~~NAAllA~qILal~d~~l~~kl~~~r~~~~~~v~~~~ 177 (182)
T 1u11_A 100 LPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSP 177 (182)
T ss_dssp SCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHSCSSC
T ss_pred CCEEEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 858998456677876330889975764898358872576538899999999837999999999999999999986578
No 5
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=396.49 Aligned_cols=161 Identities=48% Similarity=0.778 Sum_probs=156.5
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHC
Q ss_conf 98874999958816989999999999980998265453010387999988987653598299997267668511346522
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMT 81 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t 81 (165)
+.+|||+|||||+||+|+|+++.++|++|||+|+++|+||||+|+++++|++++++++++|||++|||++|||||++++|
T Consensus 5 ~~kPkV~IimGS~SD~~~~~~a~~~L~~~gI~~e~~V~SAHR~p~~l~~~~~~~~~~g~~ViIa~AG~aa~L~gvvA~~t 84 (174)
T 3lp6_A 5 GERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAAT 84 (174)
T ss_dssp -CCCSEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHHHC
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCC
T ss_conf 99996999979684699999999999983996368786474586899999999985698699971567534400555546
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42036612577666750016998403569862044316753122899999997069999999999999999999984054
Q gi|254780157|r 82 SLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTISISEYPK 161 (165)
Q Consensus 82 ~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~~~ 161 (165)
++||||||+++++++|+|+|||++|||+|+||+||++ ++++|||++|+|||+++|++|++||++||+++++++.++|+
T Consensus 85 ~~PVIgvP~~~~~~~g~dallS~vqMP~GvpVatv~I--~~~~NAAl~A~qILal~d~~i~~kl~~~r~~~~~~v~~~~~ 162 (174)
T 3lp6_A 85 PLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI--GGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDA 162 (174)
T ss_dssp SSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8877945577677677320777985899886677753--77589999999998458999999999999999999999999
Q ss_pred HCC
Q ss_conf 067
Q gi|254780157|r 162 DIP 164 (165)
Q Consensus 162 ~l~ 164 (165)
+||
T Consensus 163 ~l~ 165 (174)
T 3lp6_A 163 ELQ 165 (174)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 6
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; TM0446, structural genomics, JCSG, PSI, protein structure initiative; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=100.00 E-value=0 Score=385.60 Aligned_cols=159 Identities=53% Similarity=0.869 Sum_probs=155.2
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCC
Q ss_conf 87499995881698999999999998099826545301038799998898765359829999726766851134652242
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSL 83 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~ 83 (165)
.|||+|+|||+||+|+++|+.++|++|||+|+++|+||||+|+++++|++++++++++|||++|||++|||||++++|++
T Consensus 13 ~PkV~Ii~GS~SD~~~~~~a~~~L~~~Gi~~e~~V~SaHR~p~~l~~~~~~~~~~~~~ViIa~AG~aaaLpgvvA~~t~~ 92 (183)
T 1o4v_A 13 VPRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASITHL 92 (183)
T ss_dssp -CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSS
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCC
T ss_conf 99599996857439999999999998299179987437509388999999999779859999646766887548873261
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 03661257766675001699840356986204431675312289999999706999999999999999999998405406
Q gi|254780157|r 84 PVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTISISEYPKDI 163 (165)
Q Consensus 84 PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~~~~l 163 (165)
||||||+++++++|+|+||||+|||+|+||+||+ +++++|||++|+|||+++|++|++||++||++++++|.+++++|
T Consensus 93 PVIgVP~~~~~~~G~daLlS~lqMP~gvpVatV~--Id~~~nAal~A~~Ilal~d~~l~~kl~~~r~~~~~~v~~~~~~l 170 (183)
T 1o4v_A 93 PVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVA--INNAKNAGILAASILGIKYPEIARKVKEYKERMKREVLEKAQRL 170 (183)
T ss_dssp CEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEE--CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1786115777887677788760188888767775--47647899999999956899999999999999999999999999
Q ss_pred C
Q ss_conf 7
Q gi|254780157|r 164 P 164 (165)
Q Consensus 164 ~ 164 (165)
+
T Consensus 171 ~ 171 (183)
T 1o4v_A 171 E 171 (183)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 7
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=100.00 E-value=0 Score=376.96 Aligned_cols=159 Identities=23% Similarity=0.351 Sum_probs=151.6
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCHHHHHHH
Q ss_conf 98874999958816989999999999980998265453010387999988987653598-29999726766851134652
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGF-KLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~-~viIa~AG~aaaLpgvva~~ 80 (165)
+.+|+|+|+|||+||+++|++|.++|++|||+|+++|+||||+|+++.+|+++++.+++ +|||++|||+||||||+|++
T Consensus 263 k~~~~V~Ii~GS~SD~~~~~~~~~~l~~~~i~~~~~v~SaHr~p~~~~~~~~~~~~~~~~~v~ia~aG~sa~L~g~va~~ 342 (425)
T 2h31_A 263 ESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGN 342 (425)
T ss_dssp SCCCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHHHHH
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHC
T ss_conf 66763588714650799999999999982842147675066798999999999986699779998466322434553323
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 24203661257766675001699840356986204431675312289999999706999999999999999999998405
Q gi|254780157|r 81 TSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTISISEYP 160 (165)
Q Consensus 81 t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~~ 160 (165)
|++||||||+.++ ..|+|+||||+|||+|+||+||+ +++|||++|+||||++|+++|+||++||++++++++++|
T Consensus 343 t~~PVIgvP~~~~-~~g~d~l~S~~qmp~gvpv~tv~----~~~naa~~a~~il~~~d~~~~~~l~~~~~~~~~~~~~~d 417 (425)
T 2h31_A 343 TAYPVISCPPLTP-DWGVQDVWSSLRLPSGLGCSTVL----SPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQAD 417 (425)
T ss_dssp CSSCEEECCCCCT-TTHHHHGGGTSSCCSSCCCEECC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECCCCCC-CCCHHHHHHHHCCCCCCCEEEEE----CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6899797678756-66568889871489998157873----737899999999758999999999999999999999998
Q ss_pred HHCCC
Q ss_conf 40679
Q gi|254780157|r 161 KDIPA 165 (165)
Q Consensus 161 ~~l~a 165 (165)
++|+.
T Consensus 418 ~~l~~ 422 (425)
T 2h31_A 418 KKIRE 422 (425)
T ss_dssp HHHHT
T ss_pred HHHHH
T ss_conf 98885
No 8
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalytic subunit; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=0 Score=368.19 Aligned_cols=153 Identities=43% Similarity=0.710 Sum_probs=146.2
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCE
Q ss_conf 49999588169899999999999809982654530103879999889876535982999972676685113465224203
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPV 85 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PV 85 (165)
.|+|+|||+||+++|+|+.++|++|||+|+++|+||||+|+++.+|.++. +.++||++|||++||||+++++|++||
T Consensus 1 lV~IimGS~SD~~v~~~a~~~L~~~gi~~e~~V~SAHR~p~~l~~~~~~~---~~~viIa~AG~aaaLpgvvA~~t~~PV 77 (157)
T 2ywx_A 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNS---KADVFIAIAGLAAHLPGVVASLTTKPV 77 (157)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHC---CCSEEEEEEESSCCHHHHHHTTCSSCE
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHC---CCCEEEEECCCCCCCHHHHHHCCCCCC
T ss_conf 98999886844999999999999839965886664306999999998634---547799943652122335887079975
Q ss_pred EEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6612577666750016998403569862044316753122899999997069999999999999999999984054067
Q gi|254780157|r 86 LGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTISISEYPKDIP 164 (165)
Q Consensus 86 IgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~~~~l~ 164 (165)
||||++++ ++|+|+||||+|||+|+||+|| +++|++|||++|+|||+++|+++++||.+||++++++|+++|++||
T Consensus 78 IgVP~~~~-~~G~daLlS~vqmP~GvpVatv--~I~~~~nAal~A~~Il~~~d~~i~~~l~~~r~~~~~~v~~~~~~l~ 153 (157)
T 2ywx_A 78 IAVPVDAK-LDGLDALLSSVQMPPGIPVATV--GIDRGENAAILALEILALKDENIAKKLIEYREKMKKKVYASDEKVK 153 (157)
T ss_dssp EEEEECSS-GGGHHHHHHHHSCCTTSCCEEC--CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCC-CCHHHHHHHHHCCCCCCCEEEE--ECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75566788-6679999998616789965776--4575479999999999668999999999999999999999879999
No 9
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=97.19 E-value=0.00075 Score=44.98 Aligned_cols=90 Identities=17% Similarity=0.116 Sum_probs=75.8
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCC-CCHHHHHHHCCC
Q ss_conf 7499995881698999999999998099826545301038799998898765359829999726766-851134652242
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAA-HLPGMIAAMTSL 83 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aa-aLpgvva~~t~~ 83 (165)
.|+.|+.|+.+.....++....|+..++.+...+...+-+.+.+.+..+.+...+++++|++-|++. -+...+|.+...
T Consensus 32 ~r~lvv~d~~~~~~~~~~v~~~L~~~~i~~~~~~~~~~~t~~~v~~~~~~~~~~~~D~IvavGGGs~~D~aK~~A~~~~~ 111 (370)
T 1jq5_A 32 NKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADELDA 111 (370)
T ss_dssp SEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHTC
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCC
T ss_conf 95999989768899999999999877996999995999999999999999760488789973786302012122101466
Q ss_pred CEEEECCCCCC
Q ss_conf 03661257766
Q gi|254780157|r 84 PVLGVPIISQT 94 (165)
Q Consensus 84 PVIgVP~~~~~ 94 (165)
|+|.||+..+.
T Consensus 112 p~i~IPTt~~t 122 (370)
T 1jq5_A 112 YIVIVPTAAST 122 (370)
T ss_dssp EEEEEESSCCS
T ss_pred CEEEECCCCCC
T ss_conf 32552364346
No 10
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=96.89 E-value=0.0039 Score=40.32 Aligned_cols=90 Identities=20% Similarity=0.312 Sum_probs=70.9
Q ss_pred CEEEEEECCCCC--HHHHHHHHHHHHHCCCCEEEE-EEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHH-HHHH-
Q ss_conf 749999588169--899999999999809982654-53010387999988987653598299997267668511-3465-
Q gi|254780157|r 5 PPVAIIMGSQSD--WKIMKYAADMLDTLGIDYEAR-IISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPG-MIAA- 79 (165)
Q Consensus 5 pkV~Ii~GS~SD--~~~~~~a~~~L~~~gI~~~~~-V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpg-vva~- 79 (165)
.|+.|+.|..+- ....++..+.|++.||++.+. -.+.+-+-+.+.+.++.++..+++++|++-|++.---+ .++.
T Consensus 41 ~r~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~vf~~v~~~p~~~~v~~~~~~~~~~~~D~IvavGGGs~iD~aK~va~~ 120 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVL 120 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHHHHHHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 95899976868887359999999998769859996886689799999999999985499889982897612089999999
Q ss_pred -----------------HCCCCEEEECCCCCC
Q ss_conf -----------------224203661257766
Q gi|254780157|r 80 -----------------MTSLPVLGVPIISQT 94 (165)
Q Consensus 80 -----------------~t~~PVIgVP~~~~~ 94 (165)
....|+|.||+-.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagt 152 (371)
T 1o2d_A 121 LKEKDLSVEDLYDREKVKHWLPVVEIPTTAGT 152 (371)
T ss_dssp TTSTTCCSGGGGCGGGCCCCCCEEEEECSSCC
T ss_pred HHCCCCCHHHHCCCCCCCCCCCEEEECCCCCC
T ss_conf 85799714430576553467886882374456
No 11
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural genomics, JCSG, protein structure initiative, PSI; HET: NAP; 1.78A {Thermotoga maritima MSB8} SCOP: e.22.1.2
Probab=96.72 E-value=0.0065 Score=38.89 Aligned_cols=90 Identities=21% Similarity=0.281 Sum_probs=70.3
Q ss_pred CEEEEEECCCC--CHHHHHHHHHHHHHCCCCEEEEE-EEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHC
Q ss_conf 74999958816--98999999999998099826545-3010387999988987653598299997267668511346522
Q gi|254780157|r 5 PPVAIIMGSQS--DWKIMKYAADMLDTLGIDYEARI-ISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMT 81 (165)
Q Consensus 5 pkV~Ii~GS~S--D~~~~~~a~~~L~~~gI~~~~~V-~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t 81 (165)
.||.|+.|..| ...+.++..+.|++.|+++.+.- ...+-+-+.+.+..+.+...+++++|++-|++..-.+=..+..
T Consensus 44 kkvliVt~~~~~~~~g~~~~v~~~L~~~gi~~~~f~~v~~~pt~~~v~~~~~~~~~~~~D~IIavGGGS~iD~AKaia~~ 123 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAG 123 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHH
T ss_pred CEEEEEECCCHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 85899988757887529999999998659939998570799999999999999974599789954996341568889998
Q ss_pred -------------------CCCEEEECCCCCC
Q ss_conf -------------------4203661257766
Q gi|254780157|r 82 -------------------SLPVLGVPIISQT 94 (165)
Q Consensus 82 -------------------~~PVIgVP~~~~~ 94 (165)
..|+|.||+..++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~lP~i~iPTtagT 155 (407)
T 1vlj_A 124 ALYEGDIWDAFIGKYQIEKALPIFDVLTISAT 155 (407)
T ss_dssp TTCSSCGGGGGGTSCCCCCCCCEEEEECSCSS
T ss_pred HHCCCCHHHHHCCCCCCCCCCCEEEECCCCCC
T ss_conf 75134047763366555778986675388863
No 12
>1ta9_A Glycerol dehydrogenase; oxidoreductase; 1.90A {Schizosaccharomyces pombe}
Probab=96.65 E-value=0.0032 Score=40.89 Aligned_cols=89 Identities=16% Similarity=0.188 Sum_probs=72.3
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCC-CHHHHHHHCCC
Q ss_conf 74999958816989999999999980998265453010387999988987653598299997267668-51134652242
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAH-LPGMIAAMTSL 83 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaa-Lpgvva~~t~~ 83 (165)
.++.|+.+..+..-..++....|++.||++...+...+.+.+.+.+..+..+ +++++||++-|++.. ....++.....
T Consensus 92 kr~LIVtd~~~~~~~~~~v~~~L~~~gi~v~~~~~~~~pt~~~v~~~~~~~~-~~~D~IIAVGGGSviD~AK~ia~~~~~ 170 (450)
T 1ta9_A 92 KSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCP-DDTQVIIGVGGGKTMDSAKYIAHSMNL 170 (450)
T ss_dssp SEEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSC-TTCCEEEEEESHHHHHHHHHHHHHTTC
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH-CCCCEEEEECCCHHHHHHHHHHHHCCC
T ss_conf 9699998924889999999999987699799997189989999999999752-289989996796386888998864278
Q ss_pred CEEEECCCCCC
Q ss_conf 03661257766
Q gi|254780157|r 84 PVLGVPIISQT 94 (165)
Q Consensus 84 PVIgVP~~~~~ 94 (165)
|+|.||+..+.
T Consensus 171 p~i~VPTTa~t 181 (450)
T 1ta9_A 171 PSIICPTTASS 181 (450)
T ss_dssp CEEEEESSCSC
T ss_pred CEEEECCCCCC
T ss_conf 66884586666
No 13
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=96.63 E-value=0.0032 Score=40.91 Aligned_cols=90 Identities=18% Similarity=0.240 Sum_probs=68.3
Q ss_pred CEEEEEECCC-CCHHHHHHHHHHHHHCCCCEEEEE-EEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH--
Q ss_conf 7499995881-698999999999998099826545-301038799998898765359829999726766851134652--
Q gi|254780157|r 5 PPVAIIMGSQ-SDWKIMKYAADMLDTLGIDYEARI-ISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM-- 80 (165)
Q Consensus 5 pkV~Ii~GS~-SD~~~~~~a~~~L~~~gI~~~~~V-~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~-- 80 (165)
.+|.|+.|.. ......++..+.|+..||++.++- ...+-+.+.+.+.++.++..++++||++-|++.--.+=..+.
T Consensus 32 k~vlvv~~~~~~~~g~~~~i~~~L~~~gi~~~vf~~v~~~pt~~~v~~~~~~~~~~~~D~IiavGGGs~iD~aK~va~~~ 111 (386)
T 1rrm_A 32 QKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIIS 111 (386)
T ss_dssp CEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 87999989775658279999999987598399987847997999999986555035888799768864104899999985
Q ss_pred -------------------CCCCEEEECCCCCC
Q ss_conf -------------------24203661257766
Q gi|254780157|r 81 -------------------TSLPVLGVPIISQT 94 (165)
Q Consensus 81 -------------------t~~PVIgVP~~~~~ 94 (165)
...|+|.||+..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~lP~i~VPTtagt 144 (386)
T 1rrm_A 112 NNPEFADVRSLEGLSPTNKPSVPILAIPTTAGT 144 (386)
T ss_dssp HCGGGTTSGGGSEECCCCSCCSCEEEEECSSSC
T ss_pred CCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCC
T ss_conf 386432034430356555787757960476655
No 14
>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=96.61 E-value=0.0098 Score=37.74 Aligned_cols=133 Identities=12% Similarity=0.187 Sum_probs=85.5
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 99887499995881698999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
|+|+.|++.|.- +....+.+.+..++.+....+.+. +.++-.+++++.+ ++++|||+--|-+ ..+-.+
T Consensus 1 m~~~~kI~~iap---~e~l~~l~~~~a~~~~~~~~~~~~----~l~~~~~iA~~l~-~~~DVIISRGgTa----~~Ir~~ 68 (196)
T 2q5c_A 1 MSLSLKIALISQ---NENLLNLFPKLALEKNFIPITKTA----SLTRASKIAFGLQ-DEVDAIISRGATS----DYIKKS 68 (196)
T ss_dssp -CCCCEEEEEES---CHHHHHHHHHHHHHHTCEEEEEEC----CHHHHHHHHHHHT-TTCSEEEEEHHHH----HHHHTT
T ss_pred CCCCCEEEEECC---CHHHHHHHHHHHHHCCCEEEEEEE----EHHHHHHHHHHHH-CCCCEEEECCHHH----HHHHHH
T ss_conf 987515999879---388999999999754875678866----6999999999754-3987999896589----999982
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC--------CCHHHHHHHHHHHHH
Q ss_conf 24203661257766675001699840356986204431675312289999999706--------999999999999999
Q gi|254780157|r 81 TSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL--------DDKELTDRLNEWRTQ 151 (165)
Q Consensus 81 t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~--------~d~~i~~kl~~~r~~ 151 (165)
++.|||.+|+++ ++=+.+|.-.-+.. -.++.+ |-.+-.+..-.-.++|++ +.+++.+.+.+.+++
T Consensus 69 ~~iPVVeI~vs~--~Dil~al~~a~~~~--~kiavv--gf~~~~~~~~~i~~ll~~~i~~~~~~~~~e~~~~i~~l~~~ 141 (196)
T 2q5c_A 69 VSIPSISIKVTR--FDTMRAVYNAKRFG--NELALI--AYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTE 141 (196)
T ss_dssp CSSCEEEECCCH--HHHHHHHHHHGGGC--SEEEEE--EESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHT
T ss_pred CCCCEEEECCCH--HHHHHHHHHHHHHC--CCEEEE--ECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf 899779980788--79999999999758--978999--67850158999999859955999966889999999999986
No 15
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics, structural proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=95.90 E-value=0.025 Score=35.15 Aligned_cols=91 Identities=14% Similarity=0.141 Sum_probs=69.8
Q ss_pred CEEEEEECCC-CCH--HHHHHHHHHHHHCCCCEEEE-EEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 7499995881-698--99999999999809982654-5301038799998898765359829999726766851134652
Q gi|254780157|r 5 PPVAIIMGSQ-SDW--KIMKYAADMLDTLGIDYEAR-IISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 5 pkV~Ii~GS~-SD~--~~~~~a~~~L~~~gI~~~~~-V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
.||.|+.|+. +.. +..++..+.|++-|+++.++ =...|=+.+.+.+..+.+...+++.||++-|++.--.+=..+.
T Consensus 34 kkvlivt~~~~~~~~~~~~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~~~~~~~~~D~IiavGGGs~iD~aK~va~ 113 (387)
T 3bfj_A 34 KKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGI 113 (387)
T ss_dssp SEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHH
T ss_pred CEEEEEECCCHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
T ss_conf 86999989767861156999999999976995999837368999999999999887339988998088640008888999
Q ss_pred -C------------------CCCEEEECCCCCCC
Q ss_conf -2------------------42036612577666
Q gi|254780157|r 81 -T------------------SLPVLGVPIISQTL 95 (165)
Q Consensus 81 -t------------------~~PVIgVP~~~~~~ 95 (165)
. ..|+|.+|+..+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~p~~~vpTta~tg 147 (387)
T 3bfj_A 114 AATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTA 147 (387)
T ss_dssp HHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCC
T ss_pred HHCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 9708987788605543434678556741564564
No 16
>2bon_A Lipid kinase; DAG kinase, ATP-binding, transferase; 1.9A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=95.74 E-value=0.06 Score=32.64 Aligned_cols=87 Identities=21% Similarity=0.353 Sum_probs=62.4
Q ss_pred CCCCCEEEEEE-CCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 99887499995-88169899999999999809982654530103879999889876535982999972676685113465
Q gi|254780157|r 1 MNIAPPVAIIM-GSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA 79 (165)
Q Consensus 1 m~~~pkV~Ii~-GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~ 79 (165)
|...|+..+|. |..-+-....++...|++.|+++++++..- +....++++++..++++++ .++|+.+.+--|+.+
T Consensus 26 ~~~~~~~lli~N~k~~~~~~~r~~~~~Lr~~g~~~~v~~T~~---~gda~~la~~a~~~g~d~I-V~~GGDGTv~evv~g 101 (332)
T 2bon_A 26 MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWE---KGDAARYVEEARKFGVATV-IAGGGDGTINEVSTA 101 (332)
T ss_dssp ----CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCS---TTHHHHHHHHHHHHTCSEE-EEEESHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCC---CHHHHHHHHHHHHCCCCEE-EEECCHHHHHHHHHH
T ss_conf 345886799988876676669999999997798699998078---3229999999987798999-999883699999999
Q ss_pred HC-----CCCEEEECCC
Q ss_conf 22-----4203661257
Q gi|254780157|r 80 MT-----SLPVLGVPII 91 (165)
Q Consensus 80 ~t-----~~PVIgVP~~ 91 (165)
+. ..|.+|+=|.
T Consensus 102 L~~~~~~~~p~lgiiP~ 118 (332)
T 2bon_A 102 LIQCEGDDIPALGILPL 118 (332)
T ss_dssp HHHCCSSCCCEEEEEEC
T ss_pred HHHHCCCCCCEEEEECC
T ss_conf 98637778865999789
No 17
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate synthase, structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=95.42 E-value=0.03 Score=34.62 Aligned_cols=88 Identities=18% Similarity=0.162 Sum_probs=68.3
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCC-CCHHHHHHHCCC
Q ss_conf 7499995881698999999999998099826545301038799998898765359829999726766-851134652242
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAA-HLPGMIAAMTSL 83 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aa-aLpgvva~~t~~ 83 (165)
.|+.|+.+..+.....++..+.|++.|+++........-+.+.+.+.....+ ++++.+|++-|++. -..+.+|.+..+
T Consensus 35 ~k~liVtd~~~~~~~~~~v~~~L~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~IIavGGGsv~D~aK~vA~~~~i 113 (354)
T 3ce9_A 35 KRVSLYFGEGIYELFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTNAFKIP-AEVDALIGIGGGKAIDAVKYMAFLRKL 113 (354)
T ss_dssp SEEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHHHTTSC-TTCCEEEEEESHHHHHHHHHHHHHHTC
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH-CCCCEEEEECCCCCCCCHHHHHHHCCC
T ss_conf 9599998967889999999999987799899985899999899999999865-268889994697422103689986188
Q ss_pred CEEEECCCCC
Q ss_conf 0366125776
Q gi|254780157|r 84 PVLGVPIISQ 93 (165)
Q Consensus 84 PVIgVP~~~~ 93 (165)
|+|.||+..+
T Consensus 114 p~i~VPTTa~ 123 (354)
T 3ce9_A 114 PFISVPTSTS 123 (354)
T ss_dssp CEEEEESCCS
T ss_pred EEEEECCCCC
T ss_conf 0578546345
No 18
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha JMP134}
Probab=95.31 E-value=0.029 Score=34.70 Aligned_cols=87 Identities=21% Similarity=0.236 Sum_probs=63.1
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHH-HHHHHCCC
Q ss_conf 74999958816989999999999980998265453010387999988987653598299997267668511-34652242
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPG-MIAAMTSL 83 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpg-vva~~t~~ 83 (165)
.+|.|+.+.. -....++..+.|+.+++..... ...+-+.+.+.+..+.+...+++++|++-|++..-.+ +++-...+
T Consensus 37 k~~liv~~~~-~~~~~~~v~~~l~~~~~~v~~~-v~~~p~~~~v~~~~~~~~~~~~D~IiavGGGs~iD~aK~ia~~~~~ 114 (358)
T 3jzd_A 37 KRALVLCTPN-QQAEAERIADLLGPLSAGVYAG-AVMHVPIESARDATARAREAGADCAVAVGGGSTTGLGKAIALETGM 114 (358)
T ss_dssp SCEEEECCGG-GHHHHHHHHHHHGGGEEEEECC-CCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CEEEEEECCC-HHHHHHHHHHHHCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCC
T ss_conf 8799998275-5615999999863588189951-1419697999999999997499989996884545654112540458
Q ss_pred CEEEECCCCC
Q ss_conf 0366125776
Q gi|254780157|r 84 PVLGVPIISQ 93 (165)
Q Consensus 84 PVIgVP~~~~ 93 (165)
|+|.||+..+
T Consensus 115 P~i~vPTtas 124 (358)
T 3jzd_A 115 PIVAIPTTYA 124 (358)
T ss_dssp CEEEEECSSC
T ss_pred CEECCCCCCC
T ss_conf 6412565258
No 19
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=95.24 E-value=0.2 Score=29.29 Aligned_cols=87 Identities=22% Similarity=0.275 Sum_probs=64.5
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE---HHCCHHHHHHHHHHHHHCCC---EEEEEEECCCC-CCHHH
Q ss_conf 8749999588169899999999999809982654530---10387999988987653598---29999726766-85113
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIIS---AHRTPDRLIEFAKNARFEGF---KLIIAGAGGAA-HLPGM 76 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~S---AHR~p~~l~~~~~~~~~~~~---~viIa~AG~aa-aLpgv 76 (165)
..|+.|++...-..-+.+.....|+..+ ++...+.. .+++.+.+.++.+.+.+.+. +++|++-|+.- -+.|.
T Consensus 34 ~~k~lii~d~~v~~~~~~~~~~~l~~~~-~~~~~~~~~gE~~Ks~~~~~~i~~~l~~~~~~r~~~iiaiGGG~v~D~agf 112 (368)
T 2gru_A 34 FDQYIMISDSGVPDSIVHYAAEYFGKLA-PVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVAGV 112 (368)
T ss_dssp CSEEEEEEETTSCHHHHHHHHHHHTTTS-CEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEESHHHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH
T ss_conf 9979999898578999999999885179-669999569854289999999999998659997753899659315548999
Q ss_pred HHHHCC--CCEEEECCC
Q ss_conf 465224--203661257
Q gi|254780157|r 77 IAAMTS--LPVLGVPII 91 (165)
Q Consensus 77 va~~t~--~PVIgVP~~ 91 (165)
+|+.-- .|.|-||+.
T Consensus 113 ~As~~~RGi~~i~iPTt 129 (368)
T 2gru_A 113 AAGMMFRGIALIHVPTT 129 (368)
T ss_dssp HHHHBTTCCEEEEEECS
T ss_pred HHHHHHCCCCEEECCCC
T ss_conf 99996189837957871
No 20
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=95.01 E-value=0.17 Score=29.67 Aligned_cols=88 Identities=16% Similarity=0.171 Sum_probs=69.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE---HHCCHHHHHHHHHHHHHCCCE---EEEEEE-CCCCCCHHH
Q ss_conf 8749999588169899999999999809982654530---103879999889876535982---999972-676685113
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIIS---AHRTPDRLIEFAKNARFEGFK---LIIAGA-GGAAHLPGM 76 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~S---AHR~p~~l~~~~~~~~~~~~~---viIa~A-G~aaaLpgv 76 (165)
..|+.||.+..-..-+.++....|+..+++....+.. ..++.+.+.++.+.....+.+ ++|++- |...-+.|.
T Consensus 62 ~~r~~vI~D~~v~~l~~~~l~~~L~~~~~~v~~~~~~~gE~~Ks~~~~~~i~~~l~~~~~~r~~~viaiGGG~v~Dlagf 141 (390)
T 3okf_A 62 KQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGF 141 (390)
T ss_dssp TCEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
T ss_conf 99899998983679999999999986699469999689954289999999999987622687713797179720318899
Q ss_pred HHH--HCCCCEEEECCC
Q ss_conf 465--224203661257
Q gi|254780157|r 77 IAA--MTSLPVLGVPII 91 (165)
Q Consensus 77 va~--~t~~PVIgVP~~ 91 (165)
+|+ +--.|.|-+|+.
T Consensus 142 vAs~y~RGi~~i~iPTT 158 (390)
T 3okf_A 142 AAACYQRGVDFIQIPTT 158 (390)
T ss_dssp HHHHBTTCCEEEEEECS
T ss_pred HHHHHHCCCCEEECCCH
T ss_conf 99998289755640435
No 21
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=94.89 E-value=0.043 Score=33.62 Aligned_cols=89 Identities=21% Similarity=0.223 Sum_probs=62.0
Q ss_pred CCEEEEEECCCCC--HHHHHHHHHHHHHCCCCEEEE-EEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 8749999588169--899999999999809982654-5301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSD--WKIMKYAADMLDTLGIDYEAR-IISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD--~~~~~~a~~~L~~~gI~~~~~-V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
..|+.|+.|..+- ..+.++....|+ |+++.++ -...|-+.+.+.+.++.+...+++++|++-|++.--.+=..+.
T Consensus 50 ~~r~llV~~~~~~~~~g~~~~v~~~L~--g~~v~~f~~v~~~P~~~~v~~~~~~~r~~~~D~IIavGGGS~iD~AK~ia~ 127 (408)
T 1oj7_A 50 DARVLITYGGGSVKKTGVLDQVLDALK--GMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAA 127 (408)
T ss_dssp TCEEEEEECSSHHHHHSHHHHHHHHTT--TSEEEEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHCCHHHHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 996899989527877539999999827--991799808237989999999999997559988998089634333454223
Q ss_pred ----------------------CCCCEEEECCCCCC
Q ss_conf ----------------------24203661257766
Q gi|254780157|r 81 ----------------------TSLPVLGVPIISQT 94 (165)
Q Consensus 81 ----------------------t~~PVIgVP~~~~~ 94 (165)
...|+|.||+-.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~Pli~iPTtagT 163 (408)
T 1oj7_A 128 AANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPAT 163 (408)
T ss_dssp HTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSS
T ss_pred HCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 114874201566541255445678882345565665
No 22
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=94.85 E-value=0.09 Score=31.51 Aligned_cols=88 Identities=13% Similarity=0.065 Sum_probs=58.2
Q ss_pred CCEEEEEECCCCCH--HHHHHHHHHHHHCCCC---EEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH
Q ss_conf 87499995881698--9999999999980998---265453010387999988987653598299997267668511346
Q gi|254780157|r 4 APPVAIIMGSQSDW--KIMKYAADMLDTLGID---YEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIA 78 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~--~~~~~a~~~L~~~gI~---~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva 78 (165)
.+||+|+-..+... .+-+.+.+.|++.|+. .++.+.++...+.+..++++++.+++++++|+...-+....--..
T Consensus 2 ~~kigv~~~~~~p~~d~~~~Gi~~~l~~~G~~~~~v~~~~~~a~~d~~~~~~~~~~l~~~~~D~Ii~~~~~a~~~~~~~~ 81 (295)
T 3lft_A 2 NAKIGVLQFVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIATPAAQGLASAT 81 (295)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHTTSSCSEEEEESHHHHHHHHHHC
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHH
T ss_conf 95599996767678999999999999965998660799997798899999999999852588889966984999999866
Q ss_pred HHCCCCEEEECCC
Q ss_conf 5224203661257
Q gi|254780157|r 79 AMTSLPVLGVPII 91 (165)
Q Consensus 79 ~~t~~PVIgVP~~ 91 (165)
..+..|+.+|+..
T Consensus 82 ~~~~~v~~~v~~~ 94 (295)
T 3lft_A 82 KDLPVIMAAITDP 94 (295)
T ss_dssp SSSCEEEESCSCT
T ss_pred HHCCCCEEEECCC
T ss_conf 5246622674156
No 23
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.76 E-value=0.054 Score=32.93 Aligned_cols=85 Identities=20% Similarity=0.273 Sum_probs=60.5
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCC-CHHHHHHHCCC
Q ss_conf 74999958816989999999999980998265453010387999988987653598299997267668-51134652242
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAH-LPGMIAAMTSL 83 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaa-Lpgvva~~t~~ 83 (165)
.+|.|+.|. ......++....|+ ......-...+=+.+.+.+..+.+...++++||++-|++.- .+-.++....+
T Consensus 38 ~rvliv~g~-~~~~~~~~~~~~l~---~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IiavGGGsviD~aK~ia~~~~~ 113 (364)
T 3iv7_A 38 AKVMVIAGE-REMSIAHKVASEIE---VAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTAL 113 (364)
T ss_dssp SSEEEECCG-GGHHHHHHHTTTSC---CSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CEEEEEECC-CHHHHHHHHHHHHH---HCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHEECCCC
T ss_conf 759999387-45639999998711---20885664269699999999999986599989994581675421421111679
Q ss_pred CEEEECCCCC
Q ss_conf 0366125776
Q gi|254780157|r 84 PVLGVPIISQ 93 (165)
Q Consensus 84 PVIgVP~~~~ 93 (165)
|+|.+|+..+
T Consensus 114 P~i~iPTtas 123 (364)
T 3iv7_A 114 PIVAIPTTYA 123 (364)
T ss_dssp CEEEEECSSS
T ss_pred CEEEECCCCC
T ss_conf 8788537666
No 24
>3hl0_A Maleylacetate reductase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=94.23 E-value=0.1 Score=31.21 Aligned_cols=87 Identities=15% Similarity=0.083 Sum_probs=63.4
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC-HHHHHHHCCC
Q ss_conf 749999588169899999999999809982654530103879999889876535982999972676685-1134652242
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHL-PGMIAAMTSL 83 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaL-pgvva~~t~~ 83 (165)
.||.|+.+.. -....++....|+..++..-. -...|-+.+.+.+..+.+...+++++|++-|++..- .-.++.+...
T Consensus 35 ~r~livt~~~-~~~~~~~v~~~l~~~~~~v~~-~v~~~p~~~~v~~~~~~~~~~~~D~IiavGGGs~iD~aK~ia~~~~~ 112 (353)
T 3hl0_A 35 SRALVLSTPQ-QKGDAEALASRLGRLAAGVFS-EAAMHTPVEVTKTAVEAYRAAGADCVVSLGGGSTTGLGKAIALRTDA 112 (353)
T ss_dssp CCEEEECCGG-GHHHHHHHHHHHGGGEEEEEC-CCCTTCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CEEEEEECCC-CCCHHHHHHHHHCCCCEEEEE-CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCC
T ss_conf 8699997831-213799999986068808996-25169998999999999996399889995886300133454413678
Q ss_pred CEEEECCCCC
Q ss_conf 0366125776
Q gi|254780157|r 84 PVLGVPIISQ 93 (165)
Q Consensus 84 PVIgVP~~~~ 93 (165)
|.|.+|+...
T Consensus 113 ~~i~~ptt~s 122 (353)
T 3hl0_A 113 AQIVIPTTYA 122 (353)
T ss_dssp EEEEEECSSC
T ss_pred CEEEEECCCC
T ss_conf 6577414668
No 25
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP complex, transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=94.02 E-value=0.2 Score=29.30 Aligned_cols=85 Identities=20% Similarity=0.230 Sum_probs=61.2
Q ss_pred CCCEEEEEEC----CCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH
Q ss_conf 8874999958----816989999999999980998265453010387999988987653598299997267668511346
Q gi|254780157|r 3 IAPPVAIIMG----SQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIA 78 (165)
Q Consensus 3 ~~pkV~Ii~G----S~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva 78 (165)
|++++.||.- +..-....+++...|+..|+++++.. -+.+....++++++..+++++ |.++|+.+.+.-++.
T Consensus 23 m~kr~~vI~NP~SG~g~~~~~~~~i~~~l~~~g~~~~i~~---T~~~g~a~~~a~~~~~~~~d~-IVv~GGDGTv~ev~~ 98 (337)
T 2qv7_A 23 MRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYA---TEKIGDATLEAERAMHENYDV-LIAAGGDGTLNEVVN 98 (337)
T ss_dssp CCEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEE---CCSTTHHHHHHHHHTTTTCSE-EEEEECHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE---CCCCCHHHHHHHHHHHCCCCE-EEEECCCHHHHHHHH
T ss_conf 6635999999888987579999999999998799699998---289226999999987779999-999906569999999
Q ss_pred HHCC---CCEEEECCC
Q ss_conf 5224---203661257
Q gi|254780157|r 79 AMTS---LPVLGVPII 91 (165)
Q Consensus 79 ~~t~---~PVIgVP~~ 91 (165)
++.. .|.||+=|.
T Consensus 99 gl~~~~~~~plgiiP~ 114 (337)
T 2qv7_A 99 GIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHTTCSSCCEEEEEEC
T ss_pred HHHHHCCCCEEEEECC
T ss_conf 9986167961899549
No 26
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=93.82 E-value=0.17 Score=29.66 Aligned_cols=89 Identities=15% Similarity=0.210 Sum_probs=55.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHH----HHCCCCE-------------EEE----------------EEEH-----HCC
Q ss_conf 8874999958816989999999999----9809982-------------654----------------5301-----038
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADML----DTLGIDY-------------EAR----------------IISA-----HRT 44 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L----~~~gI~~-------------~~~----------------V~SA-----HR~ 44 (165)
|.+||+|+.++ .|-|-++.+..-+ ...|.+. ++. +..- -++
T Consensus 1 m~krIgIltsG-G~~pG~Na~i~~~v~~a~~~g~~v~g~~~G~~GL~~~~~~~l~~~~v~~~~~~gGs~lgtsR~~~~~~ 79 (320)
T 1pfk_A 1 MIKKIGVLTSG-GDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRD 79 (320)
T ss_dssp CCCEEEEEECS-SCCTTHHHHHHHHHHHHHHTTCEEEEESTHHHHHHTTCEEEECSGGGTTCTTCCSCTTCCCCCGGGGS
T ss_pred CCCEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCEEECCHHHHHHHHHCCCCEECCCCCCCCCC
T ss_conf 98649998658-88677899999999999877999999916678872798686899999779857997224778886665
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCC
Q ss_conf 799998898765359829999726766851134652242036612577
Q gi|254780157|r 45 PDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPVLGVPIIS 92 (165)
Q Consensus 45 p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PVIgVP~~~ 92 (165)
++...+..++.+..+++.+|.+-|-...-....-..-..||||+|-.-
T Consensus 80 ~~~~~~~~~~l~~~~Id~li~iGGdgs~~~a~~l~e~~~~vigIPkTI 127 (320)
T 1pfk_A 80 ENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGTI 127 (320)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEBCT
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 778889999999769988999369368999999764367433121122
No 27
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=93.11 E-value=0.099 Score=31.26 Aligned_cols=89 Identities=16% Similarity=0.103 Sum_probs=60.8
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE-EHHCCHHHHHHHHHHHHHCCC---EEEEEEECCC-CCCHHHHHH
Q ss_conf 74999958816989999999999980998265453-010387999988987653598---2999972676-685113465
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARII-SAHRTPDRLIEFAKNARFEGF---KLIIAGAGGA-AHLPGMIAA 79 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~-SAHR~p~~l~~~~~~~~~~~~---~viIa~AG~a-aaLpgvva~ 79 (165)
.|+.|+....-..-+.++....|+..++++.+.-. =.+++.+.+.++++.+.+.+. +++|++-|+. .-++|.+|+
T Consensus 32 ~k~~iv~D~~v~~~~~~~v~~~l~~~~i~~~~~~~gE~~Ks~~~~~~i~~~l~~~~~~r~d~iiavGGG~v~D~akfvA~ 111 (354)
T 1xah_A 32 DQSFLLIDEYVNQYFANKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAA 111 (354)
T ss_dssp SCEEEEEEHHHHHHHHHHHC------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEESHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 97999989857899999999999767977999769876689899999999999769898761799658730225988899
Q ss_pred HCCCCEEEECCCCC
Q ss_conf 22420366125776
Q gi|254780157|r 80 MTSLPVLGVPIISQ 93 (165)
Q Consensus 80 ~t~~PVIgVP~~~~ 93 (165)
....|+.-+++++.
T Consensus 112 ~~~rgi~~i~iptT 125 (354)
T 1xah_A 112 TLLRGVHFIQVPTT 125 (354)
T ss_dssp HBTTCCEEEEEECS
T ss_pred HHCCCCCEEECCCC
T ss_conf 86379742644773
No 28
>2fn9_A Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A*
Probab=92.93 E-value=0.58 Score=26.27 Aligned_cols=84 Identities=18% Similarity=0.230 Sum_probs=64.2
Q ss_pred CCCEEEEEECCCCCH---HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH-
Q ss_conf 887499995881698---9999999999980998265453010387999988987653598299997267668511346-
Q gi|254780157|r 3 IAPPVAIIMGSQSDW---KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIA- 78 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~---~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva- 78 (165)
|+.+|+|++-+-++- .+.+.+.+.++++|+ ++.+...+..++...++++.+..++.+.+|....-...+...+.
T Consensus 1 ~~g~Igvvvp~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgii~~~~~~~~~~~~l~~ 78 (290)
T 2fn9_A 1 MKGKMAIVISTLNNPWFVVLAETAKQRAEQLGY--EATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKR 78 (290)
T ss_dssp --CEEEEEESCSSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH
T ss_conf 989899992889899999999999999998699--899996999989999999999974998553013332110899999
Q ss_pred -HHCCCCEEEE
Q ss_conf -5224203661
Q gi|254780157|r 79 -AMTSLPVLGV 88 (165)
Q Consensus 79 -~~t~~PVIgV 88 (165)
.....||+.+
T Consensus 79 ~~~~gipvV~~ 89 (290)
T 2fn9_A 79 AKEAGIPVFCV 89 (290)
T ss_dssp HHHTTCCEEEE
T ss_pred HHHCCCEEEEE
T ss_conf 98569839996
No 29
>3l6u_A ABC-type sugar transport system periplasmic component; structural genomics, nysgrc, target 11006S, PSI-2, protein structure initiative; 1.90A {Exiguobacterium sibiricum}
Probab=91.67 E-value=0.83 Score=25.28 Aligned_cols=85 Identities=11% Similarity=0.058 Sum_probs=63.0
Q ss_pred CCCEEEEEECCCCC---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 88749999588169---899999999999809982654530103879999889876535982999972676685113465
Q gi|254780157|r 3 IAPPVAIIMGSQSD---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA 79 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~ 79 (165)
.+..|++++-+.++ ..+.+.+.+.+++.| |++.+.++...++...+.++++..++++.+|....-..++...+.-
T Consensus 7 k~~~Igvi~~~~~~~f~~~~~~~i~~~a~~~G--y~~~~~~~~~~~~~~~~~i~~li~~~~DgIii~~~~~~~~~~~l~~ 84 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANK--YEALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEE 84 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTT--CEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 99999999968999899999999999999869--9899997999989999999999976999999943322013899999
Q ss_pred HC--CCCEEEEC
Q ss_conf 22--42036612
Q gi|254780157|r 80 MT--SLPVLGVP 89 (165)
Q Consensus 80 ~t--~~PVIgVP 89 (165)
.. ..|||.+-
T Consensus 85 ~~~~giPVV~~~ 96 (293)
T 3l6u_A 85 AKKAGIPVFAID 96 (293)
T ss_dssp HHHTTCCEEEES
T ss_pred HHHCCCCEEECC
T ss_conf 998699799717
No 30
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=91.59 E-value=0.84 Score=25.23 Aligned_cols=132 Identities=14% Similarity=0.195 Sum_probs=79.1
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHH-HHHCCCEEEEEEECCCCCCHHHHHHHCC
Q ss_conf 874999958816989999999999980998265453010387999988987-6535982999972676685113465224
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKN-ARFEGFKLIIAGAGGAAHLPGMIAAMTS 82 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~-~~~~~~~viIa~AG~aaaLpgvva~~t~ 82 (165)
+|.+..+ |.|. ..+=+..+..+|.=..++.|... ..+...+.+.. ....+++|||+--|-+ ..+-.+++
T Consensus 13 ~p~i~~~--~~sr--L~~l~~~i~~e~~~~a~i~v~~~--~~edav~~~~~~~~~~~~DviISRG~ta----~~Ir~~~~ 82 (225)
T 2pju_A 13 KPVIWTV--SVTR--LFELFRDISLEFDHLANITPIQL--GFEKAVTYIRKKLANERCDAIIAAGSNG----AYLKSRLS 82 (225)
T ss_dssp CCEEEEE--CCHH--HHHHHHHHHTTTTTTCEEEEECC--CHHHHHHHHHHHTTTSCCSEEEEEHHHH----HHHHTTCS
T ss_pred CCEEEEE--EHHH--HHHHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHHHCCCCCEEEECCHHH----HHHHHHCC
T ss_conf 9889998--6799--99999999997446756999827--4789999999998649986999685689----99998589
Q ss_pred CCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC--------CCHHHHHHHHHHHHH
Q ss_conf 203661257766675001699840356986204431675312289999999706--------999999999999999
Q gi|254780157|r 83 LPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL--------DDKELTDRLNEWRTQ 151 (165)
Q Consensus 83 ~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~--------~d~~i~~kl~~~r~~ 151 (165)
.|||-+++++ ++=+.+|.-.-+..+ .++. ||-.+-.+..-.-.++|++ +.+++++.+++.+++
T Consensus 83 iPVVeI~vs~--~Dil~aL~~a~~~~~--kIav--Vgf~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~v~~l~~~ 153 (225)
T 2pju_A 83 VPVILIKPSG--YDVLQFLAKAGKLTS--SIGV--VTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKAN 153 (225)
T ss_dssp SCEEEECCCH--HHHHHHHHHTTCTTS--CEEE--EEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHT
T ss_pred CCEEEEECCH--HHHHHHHHHHHHHCC--CEEE--EECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf 9889970787--689999999997589--8899--937640369999999969944999966889999999999986
No 31
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp}
Probab=90.77 E-value=1 Score=24.72 Aligned_cols=56 Identities=21% Similarity=0.345 Sum_probs=33.6
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEE
Q ss_conf 99887499995881698999999999998099826545301038799998898765359829
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKL 62 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~v 62 (165)
|+++-||++|.|+.+ -+...+++.|-+.|.. |+-..|+.+++.+..++.+..+.++
T Consensus 1 M~L~~KvalITGas~--GIG~aiA~~la~~Ga~----V~~~~r~~~~l~~~~~~l~~~g~~~ 56 (247)
T 3lyl_A 1 MSLNEKVALVTGASR--GIGFEVAHALASKGAT----VVGTATSQASAEKFENSMKEKGFKA 56 (247)
T ss_dssp CTTTTCEEEESSCSS--HHHHHHHHHHHHTTCE----EEEEESSHHHHHHHHHHHHHTTCCE
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHHHHCCCCE
T ss_conf 999999999928886--8999999999986999----9999798899999999998549958
No 32
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=89.98 E-value=1.2 Score=24.29 Aligned_cols=83 Identities=16% Similarity=0.253 Sum_probs=61.8
Q ss_pred C-EEEEEECCCCC-HH--HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 7-49999588169-89--99999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 5 P-PVAIIMGSQSD-WK--IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 5 p-kV~Ii~GS~SD-~~--~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
| +|+++..+.++ +- ..+.+.+.++++|+ ++.+..+...+++-.+.++++.+++++.||....-...+...+...
T Consensus 2 p~~Ig~~~~~~~~~~~~~~~~~~~~~a~~~G~--~~~~~~~~~~~~~q~~~i~~li~~~vDgIii~~~~~~~~~~~i~~a 79 (306)
T 2vk2_A 2 PLTVGFSQVGSESGWRAAETNVAKSEAEKRGI--TLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEA 79 (306)
T ss_dssp CCEEEEEECCCCSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHH
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 87999997999889999999999999998699--8999959999999999999999769899999078821159999999
Q ss_pred CC--CCEEEEC
Q ss_conf 24--2036612
Q gi|254780157|r 81 TS--LPVLGVP 89 (165)
Q Consensus 81 t~--~PVIgVP 89 (165)
.. .|||.+=
T Consensus 80 ~~~gipvv~~d 90 (306)
T 2vk2_A 80 KDAEIPVFLLD 90 (306)
T ss_dssp HHTTCCEEEES
T ss_pred HHCCCEEEEEC
T ss_conf 97698199981
No 33
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=89.94 E-value=0.024 Score=35.25 Aligned_cols=87 Identities=14% Similarity=0.167 Sum_probs=56.1
Q ss_pred CEEEEEECCCCCH-HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCC-CHHHHHHHCC
Q ss_conf 7499995881698-9999999999980998265453010387999988987653598299997267668-5113465224
Q gi|254780157|r 5 PPVAIIMGSQSDW-KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAH-LPGMIAAMTS 82 (165)
Q Consensus 5 pkV~Ii~GS~SD~-~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaa-Lpgvva~~t~ 82 (165)
.|+.|+.++.... ...++....|++.|+.+. +.+.+.....+.. +..+.+.+++++|++-|++.. +...++.+..
T Consensus 42 ~r~liVt~~~~~~~~~~~~v~~~L~~~~~~~~--v~~~~~~~~~~e~-l~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~ 118 (376)
T 1kq3_A 42 ERAFVVIDDFVDKNVLGENFFSSFTKVRVNKQ--IFGGECSDEEIER-LSGLVEEETDVVVGIGGGKTLDTAKAVAYKLK 118 (376)
T ss_dssp SEEEEEECHHHHHHTTCTTGGGGCSSSEEEEE--ECCSSCBHHHHHH-HHTTCCTTCCEEEEEESHHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEE--ECCCCCCCHHHHH-HHHHHHHCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 92899989726661589999999987698699--7189999489999-99998609998999678521120188884247
Q ss_pred CCEEEECCCCCC
Q ss_conf 203661257766
Q gi|254780157|r 83 LPVLGVPIISQT 94 (165)
Q Consensus 83 ~PVIgVP~~~~~ 94 (165)
.|+|.||+..+.
T Consensus 119 ~Pli~IPTt~~t 130 (376)
T 1kq3_A 119 KPVVIVPTIAST 130 (376)
T ss_dssp CCEEEEESSCCC
T ss_pred CCCEEECCCCCC
T ss_conf 983575675776
No 34
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, open form, form J, domain movement, cyclase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=89.69 E-value=0.49 Score=26.74 Aligned_cols=88 Identities=11% Similarity=0.146 Sum_probs=62.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEE------EEE---EEHHCCHHHHHHHHHHHHHCCC-----EEEEEEECC
Q ss_conf 87499995881698999999999998099826------545---3010387999988987653598-----299997267
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYE------ARI---ISAHRTPDRLIEFAKNARFEGF-----KLIIAGAGG 69 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~------~~V---~SAHR~p~~l~~~~~~~~~~~~-----~viIa~AG~ 69 (165)
+.++.||....-+.-+.++....|+..++++. +.+ .=.+++.+.+.++.+.+.+++. +++|++-|+
T Consensus 36 ~~~~~iitD~~v~~l~~~~i~~~l~~~~~~~~~~~~~~~~~~p~gE~~K~~~~~~~i~~~l~~~~~~~~r~d~iIaiGGG 115 (393)
T 1sg6_A 36 STTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGG 115 (393)
T ss_dssp CSEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 98189998896579899999999987175224676248998379955399999999999998535467887669995585
Q ss_pred C-CCCHHHHHH--HCCCCEEEECCC
Q ss_conf 6-685113465--224203661257
Q gi|254780157|r 70 A-AHLPGMIAA--MTSLPVLGVPII 91 (165)
Q Consensus 70 a-aaLpgvva~--~t~~PVIgVP~~ 91 (165)
. .-+.+.+|+ +.-.|.|-||+.
T Consensus 116 ~v~D~ak~~A~~y~rgi~~i~vPTt 140 (393)
T 1sg6_A 116 VIGDLTGFVASTYMRGVRYVQVPTT 140 (393)
T ss_dssp HHHHHHHHHHHHGGGCCEEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 0324567777776268743542142
No 35
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp}
Probab=89.53 E-value=1.3 Score=24.06 Aligned_cols=30 Identities=23% Similarity=0.322 Sum_probs=21.6
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 998874999958816989999999999980998
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGID 33 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~ 33 (165)
|+|+ |+++|.|+.+. +...+++.|-+-|..
T Consensus 1 MkM~-K~alITGas~G--IG~aia~~la~~Ga~ 30 (246)
T 3osu_A 1 MKMT-KSALVTGASRG--IGRSIALQLAEEGYN 30 (246)
T ss_dssp CCCS-CEEEETTCSSH--HHHHHHHHHHHTTCE
T ss_pred CCCC-CEEEEECCCCH--HHHHHHHHHHHCCCE
T ss_conf 9998-78999268868--999999999987998
No 36
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A*
Probab=88.98 E-value=0.42 Score=27.15 Aligned_cols=84 Identities=23% Similarity=0.335 Sum_probs=48.1
Q ss_pred CCCEEEEEECCCCCH-----HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCE-EEEEEE---CCCCCC
Q ss_conf 887499995881698-----99999999999809982654530103879999889876535982-999972---676685
Q gi|254780157|r 3 IAPPVAIIMGSQSDW-----KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFK-LIIAGA---GGAAHL 73 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~-----~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~-viIa~A---G~aaaL 73 (165)
|+.||+||.|+.|=. ..++.+.+.|++.|.++ ..+..... .....+..+.+ ||++.- |..+++
T Consensus 1 m~~ki~vl~GG~S~E~~iSl~Sg~~i~~aL~~~g~~v--~~id~~~~------~~~~l~~~~~d~vf~~~hG~~~ed~~~ 72 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDA--YPVDPKEV------DVTQLKSMGFQKVFIALHGRGGEDGTL 72 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEE--EEECTTTS------CGGGTTTTTEEEEEECCCSTTTSSSHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEE--EEECCCCC------CHHHHHHCCCCEEEEECCCCCCCCHHH
T ss_conf 9850999938587312869999999999998869989--99899855------488886448988999346885413799
Q ss_pred HHHHHHHCCCCEEEECCCCCCC
Q ss_conf 1134652242036612577666
Q gi|254780157|r 74 PGMIAAMTSLPVLGVPIISQTL 95 (165)
Q Consensus 74 pgvva~~t~~PVIgVP~~~~~~ 95 (165)
++.. -....|.+|+.+.+..+
T Consensus 73 ~~~l-e~~~ipy~Gs~~~~~~l 93 (306)
T 1iow_A 73 QGML-ELMGLPYTGSGVMASAL 93 (306)
T ss_dssp HHHH-HHHTCCBSSCCHHHHHH
T ss_pred HHHH-HHCCCEEECCCHHHHHH
T ss_conf 9999-98796382588899998
No 37
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=88.79 E-value=1.4 Score=23.73 Aligned_cols=84 Identities=18% Similarity=0.242 Sum_probs=59.7
Q ss_pred CEEEEEECCCC-CH--HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH-
Q ss_conf 74999958816-98--999999999998099826545301038799998898765359829999726766851134652-
Q gi|254780157|r 5 PPVAIIMGSQS-DW--KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM- 80 (165)
Q Consensus 5 pkV~Ii~GS~S-D~--~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~- 80 (165)
.++++++...+ ++ ...+.+...++++|+ ++.+..+...+++..+.++++..++++.+|....-...+...+...
T Consensus 6 k~Ig~i~~~~~~~f~~~~~~g~~~~a~~~G~--~~~~~~~~~d~~~q~~~i~~~i~~~vDgiIi~~~~~~~~~~~l~~~~ 83 (291)
T 3l49_A 6 KTIGITAIGTDHDWDLKAYQAQIAEIERLGG--TAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKIN 83 (291)
T ss_dssp CEEEEEESCCSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 9999995899988999999999999997499--99999389999999999999997499999977864031589999999
Q ss_pred -CCCCEEEECC
Q ss_conf -2420366125
Q gi|254780157|r 81 -TSLPVLGVPI 90 (165)
Q Consensus 81 -t~~PVIgVP~ 90 (165)
...|||.+..
T Consensus 84 ~~~IPvv~~~~ 94 (291)
T 3l49_A 84 DAGIPLFTVDT 94 (291)
T ss_dssp HTTCCEEEESC
T ss_pred HCCCCEEECCC
T ss_conf 86993784465
No 38
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=88.43 E-value=0.9 Score=25.04 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=32.5
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHC-CCCEEEEEEEHHCC
Q ss_conf 98874999958816989999999999980-99826545301038
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTL-GIDYEARIISAHRT 44 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~-gI~~~~~V~SAHR~ 44 (165)
+|+ |+.++.|+.+|+-.+......|++. ++++.+-+.+.|..
T Consensus 4 ~Mk-kI~~v~GtR~e~~k~~pl~~~l~~~~~~~~~li~tG~H~~ 46 (376)
T 1v4v_A 4 GMK-RVVLAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHRE 46 (376)
T ss_dssp CCE-EEEEEECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHH
T ss_pred CCC-EEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
T ss_conf 998-8999997018499999999999728999889998268856
No 39
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=88.13 E-value=1.2 Score=24.24 Aligned_cols=116 Identities=15% Similarity=0.118 Sum_probs=70.8
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE---EEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE--CCCCCCH---
Q ss_conf 8874999958816989999999999980998265---4530103879999889876535982999972--6766851---
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEA---RIISAHRTPDRLIEFAKNARFEGFKLIIAGA--GGAAHLP--- 74 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~---~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A--G~aaaLp--- 74 (165)
|+.||+|+...-+.....+.+.+.|++++.+.++ .|-++--.|-...+.+++ .+++.+|+.- |-..|--
T Consensus 1 m~kkIgIV~t~Fnr~dM~~~Ai~~L~~~g~~~~I~~~~VPGa~ElP~a~~~l~~~---~~~davialG~VG~T~h~~~va 77 (156)
T 2b99_A 1 MTKKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLEE---EGCDIVMALGMPGKAEKDKVCA 77 (156)
T ss_dssp -CCEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHHH---SCCSEEEEEECCCSSHHHHHHH
T ss_pred CCCEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHC---CCCCEEEEEEEECCCCCCHHHH
T ss_conf 9967999984540999999999999972999747999869665799999999734---7988899997750666104159
Q ss_pred -------HHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf -------1346522420366125776667500169984035698620443167531228999999970
Q gi|254780157|r 75 -------GMIAAMTSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILA 135 (165)
Q Consensus 75 -------gvva~~t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~ 135 (165)
--++-.|..|||+|-+....-.-..-+.. ...+.+.-+|.-|++++-
T Consensus 78 ~~~s~gl~~~~l~t~~pIi~V~~~ede~q~~~~~~~--------------~a~~rg~e~A~~a~~m~~ 131 (156)
T 2b99_A 78 HEASLGLMLAQLMTNKHIIEVFVHEDEAKDDKELDW--------------LAKRRAEEHAENVYYLLF 131 (156)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCGGGSSSHHHHHH--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHH
T ss_conf 999999999988768998999746875665998778--------------888779999999999998
No 40
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum tls} SCOP: c.2.1.2
Probab=87.81 E-value=1.7 Score=23.33 Aligned_cols=55 Identities=20% Similarity=0.229 Sum_probs=33.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCC---EEEEEEEHHCCHHHHHHHHHHHHHCCCEE
Q ss_conf 4999958816989999999999980998---26545301038799998898765359829
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGID---YEARIISAHRTPDRLIEFAKNARFEGFKL 62 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~---~~~~V~SAHR~p~~l~~~~~~~~~~~~~v 62 (165)
||++|.|+.| -+...++..|-+-|.. +...|.-.-|+.+++.+..++.+..+.++
T Consensus 3 KV~lITGas~--GIG~aiA~~la~~Ga~v~~~~~~v~~~~r~~~~l~~~~~~i~~~g~~~ 60 (244)
T 2bd0_A 3 HILLITGAGK--GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALT 60 (244)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEE
T ss_pred CEEEEECCCC--HHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCE
T ss_conf 8899935886--899999999998375002677579999399999999999998559947
No 41
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=87.05 E-value=1.8 Score=23.05 Aligned_cols=82 Identities=17% Similarity=0.207 Sum_probs=54.3
Q ss_pred CCCCCEEEEEECCCCCHHHHH----HHHHHHHHCCC----CEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 998874999958816989999----99999998099----8265453010387999988987653598299997267668
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMK----YAADMLDTLGI----DYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~----~a~~~L~~~gI----~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
|...+||+|+. +.++ |... ...+.|++.|. +.++.+.++...+....++++++..++++++|+...- +
T Consensus 5 ~~~~~ki~i~~-~~~~-p~~d~~~~g~~~~l~~~G~~~g~~i~~~~~da~~d~~~~~~~~~~l~~~~~D~ii~~~~~--a 80 (302)
T 2qh8_A 5 MAKTAKVAVSQ-IVEH-PALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATP--T 80 (302)
T ss_dssp --CCEEEEEEE-SSCC-HHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEESHH--H
T ss_pred CCCCCEEEEEE-EECC-HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCH--H
T ss_conf 16874699998-6078-889999999999998609757970899994598899999999999864377089965987--9
Q ss_pred CHHHHHHHCCCCEE
Q ss_conf 51134652242036
Q gi|254780157|r 73 LPGMIAAMTSLPVL 86 (165)
Q Consensus 73 Lpgvva~~t~~PVI 86 (165)
+..++......|++
T Consensus 81 ~~~~~~~~~~~~~~ 94 (302)
T 2qh8_A 81 AQALVSATKTIPIV 94 (302)
T ss_dssp HHHHHHHCSSSCEE
T ss_pred HHHHHHHHHCCCCC
T ss_conf 99998754305651
No 42
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=86.74 E-value=1.9 Score=22.94 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=50.6
Q ss_pred CCCCEEEEEECCCCC----HHHHHHHHHHHHHCCCCEEEEEE-------EHHCCHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 988749999588169----89999999999980998265453-------0103879999889876535982999972676
Q gi|254780157|r 2 NIAPPVAIIMGSQSD----WKIMKYAADMLDTLGIDYEARII-------SAHRTPDRLIEFAKNARFEGFKLIIAGAGGA 70 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD----~~~~~~a~~~L~~~gI~~~~~V~-------SAHR~p~~l~~~~~~~~~~~~~viIa~AG~a 70 (165)
...|||.+|.||... ...++.+.+.+++.|+++++.=. ..--.|+.+.++.+....- .-+||+.----
T Consensus 32 ~~~pKIl~i~GS~R~~S~~~~La~~~~~~l~~~g~ev~iidL~dlpl~~~~~~~~~~v~~l~~~i~~A-DgvIi~TPeYn 110 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIWS-EGQVWVSPERH 110 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHC-SEEEEEEECSS
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCEEEECCCCC
T ss_conf 89984999979999988899999999998876798799975134898756777887899999999838-92799764405
Q ss_pred CCCHHHHHHH
Q ss_conf 6851134652
Q gi|254780157|r 71 AHLPGMIAAM 80 (165)
Q Consensus 71 aaLpgvva~~ 80 (165)
+..||++-..
T Consensus 111 gsipg~LKN~ 120 (247)
T 2q62_A 111 GAMTGIMKAQ 120 (247)
T ss_dssp SSCCHHHHHH
T ss_pred CCHHHHHHHH
T ss_conf 5410899988
No 43
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.06 E-value=2 Score=22.74 Aligned_cols=64 Identities=14% Similarity=0.297 Sum_probs=41.7
Q ss_pred CCCCC--EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 99887--49999588169899999999999809982654530103879999889876535982999972676
Q gi|254780157|r 1 MNIAP--PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGA 70 (165)
Q Consensus 1 m~~~p--kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~a 70 (165)
|+|++ |+++|.|+.|- +...+++.|-+-|.. |+-..|+.+++.+..++.+..+.++....+-.+
T Consensus 1 M~~~~knk~vlITGas~G--IG~aiA~~la~~Ga~----V~i~~r~~~~l~~~~~~i~~~g~~~~~~~~Dvs 66 (252)
T 3h7a_A 1 MSLTPRNATVAVIGAGDY--IGAEIAKKFAAEGFT----VFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR 66 (252)
T ss_dssp ----CCSCEEEEECCSSH--HHHHHHHHHHHTTCE----EEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT
T ss_pred CCCCCCCCEEEEECCCHH--HHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 989999998999758558--999999999987999----999989999999999999963983999977768
No 44
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=85.82 E-value=1.9 Score=22.96 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=38.7
Q ss_pred CCCCC--EEEEEECCCCCHHHHHHHHHHHHHC--CCCEEEEEEEHHCCHHHHHHHHHH
Q ss_conf 99887--4999958816989999999999980--998265453010387999988987
Q gi|254780157|r 1 MNIAP--PVAIIMGSQSDWKIMKYAADMLDTL--GIDYEARIISAHRTPDRLIEFAKN 54 (165)
Q Consensus 1 m~~~p--kV~Ii~GS~SD~~~~~~a~~~L~~~--gI~~~~~V~SAHR~p~~l~~~~~~ 54 (165)
|+|+. |++++.|+..|+-.+.+....|++- ++++.+-+.+.|.. ...++.+.
T Consensus 3 ~~m~~kmKI~~v~GtR~e~~kl~pli~~l~~~~~~~~~~li~tG~H~~--~~~~~~~~ 58 (375)
T 3beo_A 3 VDMTERLKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQ--MLDQVLSI 58 (375)
T ss_dssp CCCSSCEEEEEEECSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSH--HHHHHHHH
T ss_pred CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH--HHHHHHHH
T ss_conf 544658549999964473999999999998476788779999479789--99999998
No 45
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus bulgaricus, transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=84.98 E-value=1.7 Score=23.31 Aligned_cols=121 Identities=12% Similarity=0.158 Sum_probs=66.6
Q ss_pred CEEEEEECCCCCHHHHHHHHHHH----HHCCCCE-------------EEEE----------------EE-----HHCCHH
Q ss_conf 74999958816989999999999----9809982-------------6545----------------30-----103879
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADML----DTLGIDY-------------EARI----------------IS-----AHRTPD 46 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L----~~~gI~~-------------~~~V----------------~S-----AHR~p~ 46 (165)
+||+|+..+ -|-|-++.+...+ ...|++. ++.- .. ..+.++
T Consensus 2 krI~IltsG-G~~pG~Na~i~~~v~~a~~~~~~v~g~~~G~~GL~~~~~~~l~~~~v~~~~~~gGt~LgtsR~~~~~~~~ 80 (319)
T 1zxx_A 2 KRIGILTSG-GDAPGMNAAVRAVTRVAIANGLEVFGIRYGFAGLVAGDIFPLESEDVAHLINVSGTFLYSARYPEFAEEE 80 (319)
T ss_dssp CEEEEEECS-SCCTTHHHHHHHHHHHHHTTTCEEEEECTHHHHHHHTCEEECCGGGGTTCTTCCSCTTCCCCCGGGTSHH
T ss_pred CEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEECCHHHHHHHHHCCCCEECCCCCCCCCCHH
T ss_conf 889998847-8746699999999999997899899985017885689907799999988870798521468887664367
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCC-------CCC-----------CCCHHHHHHCC
Q ss_conf 999889876535982999972676685113465224203661257766-------675-----------00169984035
Q gi|254780157|r 47 RLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPVLGVPIISQT-------LGG-----------IDSLLSIVQMP 108 (165)
Q Consensus 47 ~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PVIgVP~~~~~-------~~G-----------~dallS~vqMP 108 (165)
...+..++.+..+++.+|.+-|-...-...--+....||||+|-.-.+ --| +|.+.++....
T Consensus 81 ~~~~~~~~l~~~~Id~Li~iGGdgS~~~a~~l~~~~i~vigIPkTIDNDl~~td~t~Gf~TA~~~~~~~i~~l~~~a~s~ 160 (319)
T 1zxx_A 81 GQLAGIEQLKKHGIDAVVVIGGDGSYHGALQLTRHGFNSIGLPGTIDNDIPYTDATIGYDTACMTAMDAIDKIRDTASSH 160 (319)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEEETTCCCTTCSCCEEHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 78999999997699899993796179999997753685677620016898884008689999999999999999861246
Q ss_pred CCCCCEEEECCCCCCHHHHHHHH
Q ss_conf 69862044316753122899999
Q gi|254780157|r 109 AGVPVGTMAIGQSGAINASLLAV 131 (165)
Q Consensus 109 ~Gvpvatv~vg~~~~~NAal~A~ 131 (165)
+.+-+.-+ .|.+ ++++|+
T Consensus 161 ~rv~ivEv-MGR~----~G~lA~ 178 (319)
T 1zxx_A 161 HRVFIVNV-MGRN----CGDIAM 178 (319)
T ss_dssp TCEEEEEE-CCTT----CCHHHH
T ss_pred CCEEEEEE-CCCC----HHHHHH
T ss_conf 77489995-5753----538999
No 46
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=84.24 E-value=2.5 Score=22.18 Aligned_cols=67 Identities=19% Similarity=0.282 Sum_probs=50.0
Q ss_pred EEEEEE-CCCCCHHHHHHHHHHHHHCCCCEEEE--EEEHHC-----CHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 499995-88169899999999999809982654--530103-----87999988987653598299997267668
Q gi|254780157|r 6 PVAIIM-GSQSDWKIMKYAADMLDTLGIDYEAR--IISAHR-----TPDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 6 kV~Ii~-GS~SD~~~~~~a~~~L~~~gI~~~~~--V~SAHR-----~p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
+|+|+. .|.-|....+.+.+.|+.+|.+..+. +..-|+ .-+|..++.+-..+.++++|+++-|+.++
T Consensus 19 ~I~iiAPSs~~~~e~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agt~~~Ra~dl~~a~~dp~i~aI~~~rGG~ga 93 (311)
T 1zl0_A 19 RVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC 93 (311)
T ss_dssp EEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCH
T ss_conf 999995899889999999999999689999867660002586569999999999988548898889985663246
No 47
>3g23_A Peptidase U61, LD-carboxypeptidase A; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.89A {Novosphingobium aromaticivorans DSM12444}
Probab=83.52 E-value=2.7 Score=21.99 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=48.0
Q ss_pred CCCEEEEEECCCC-CHHHHHH--HHHHHHHCCCCEEEE--EEEHHCC-----HHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 8874999958816-9899999--999999809982654--5301038-----7999988987653598299997267668
Q gi|254780157|r 3 IAPPVAIIMGSQS-DWKIMKY--AADMLDTLGIDYEAR--IISAHRT-----PDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 3 ~~pkV~Ii~GS~S-D~~~~~~--a~~~L~~~gI~~~~~--V~SAHR~-----p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
|+.||+||.-|.. |....+. +...|+.+|.+.... +..-|+. -+|..++.+-..+..++.|+++-|+.++
T Consensus 2 ~~~rI~iiAPss~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~ag~d~~Ra~dl~~a~~d~~i~aI~~~rGG~ga 81 (274)
T 3g23_A 2 MTRRIAICAPSTPFTREDSARVIALAAAEFPDLSLSFHEQCFASEGHFAGSDALRLSAFLECANDDAFEAVWFVRGGYGA 81 (274)
T ss_dssp CCEEEEEECSSSCCCHHHHHHHHHHHHHHCTTEEEEECGGGGCCSSSSSSCHHHHHHHHHHHHTCTTCSEEEESCCSSCT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCH
T ss_conf 96679999489999877889999999997199479888330210586079989999999987655898899993663258
Q ss_pred C
Q ss_conf 5
Q gi|254780157|r 73 L 73 (165)
Q Consensus 73 L 73 (165)
-
T Consensus 82 ~ 82 (274)
T 3g23_A 82 N 82 (274)
T ss_dssp H
T ss_pred H
T ss_conf 8
No 48
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=81.19 E-value=3.2 Score=21.43 Aligned_cols=83 Identities=11% Similarity=0.123 Sum_probs=54.6
Q ss_pred CCCCEEEEEECCCCCH--------HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 9887499995881698--------99999999999809982654530103879999889876535982999972676685
Q gi|254780157|r 2 NIAPPVAIIMGSQSDW--------KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHL 73 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~--------~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaL 73 (165)
+-|.+|++++.+.+|. .+.+.+...+++.| |.+.+.-.+..++...++.+....++++-+|...-...
T Consensus 5 ~~t~~Igvi~~~~~~~~~~npf~~~~~~gi~~~a~~~G--y~l~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-- 80 (295)
T 3hcw_A 5 NQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHG--YGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKEN-- 80 (295)
T ss_dssp CCSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTT--CEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCTT--
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCC--
T ss_conf 77797999981687666569799999999999999869--98999978999799999999999589988999766566--
Q ss_pred HHHHHH--HCCCCEEEE
Q ss_conf 113465--224203661
Q gi|254780157|r 74 PGMIAA--MTSLPVLGV 88 (165)
Q Consensus 74 pgvva~--~t~~PVIgV 88 (165)
...+.- ....||+-+
T Consensus 81 ~~~~~~l~~~~iPvV~~ 97 (295)
T 3hcw_A 81 DPIKQMLIDESMPFIVI 97 (295)
T ss_dssp CHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHCCCCEEEE
T ss_conf 09999999759988998
No 49
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=80.09 E-value=3.5 Score=21.20 Aligned_cols=87 Identities=18% Similarity=0.146 Sum_probs=58.1
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH-----CCHHHHH----HHHHHHHHCCCE-EEEEEECCCCC
Q ss_conf 8874999958816989999999999980998265453010-----3879999----889876535982-99997267668
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAH-----RTPDRLI----EFAKNARFEGFK-LIIAGAGGAAH 72 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAH-----R~p~~l~----~~~~~~~~~~~~-viIa~AG~aaa 72 (165)
|+..++|+=.+---+.+.++..+.|-. .++.+.-.++| |+++++. ++++....++++ ++|||--.++.
T Consensus 4 m~~pIgvfDSGvGGLsvl~~l~~~lP~--~~~iY~~D~~~~PYG~ks~~ei~~~~~~~~~~l~~~~~~~iViACNTas~~ 81 (269)
T 3ist_A 4 MKQAIGFIDSGVGGLTVVREVLKQLPH--EQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAA 81 (269)
T ss_dssp SCCCEEEEESSSTTHHHHHHHHHHCTT--CCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
T ss_conf 779689995897579999999997899--998999448899989999999999999999999866999899946855799
Q ss_pred CHHHHHHHCCCCEEEECCC
Q ss_conf 5113465224203661257
Q gi|254780157|r 73 LPGMIAAMTSLPVLGVPII 91 (165)
Q Consensus 73 Lpgvva~~t~~PVIgVP~~ 91 (165)
..-.+-.....|+||+...
T Consensus 82 al~~lr~~~~ipiigvi~p 100 (269)
T 3ist_A 82 ALYDIREKLDIPVIGVIQP 100 (269)
T ss_dssp HHHHHHHHCSSCEEESHHH
T ss_pred HHHHHHHHCCCCEECCCCH
T ss_conf 9999997579976426626
No 50
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP, protein structure initiative; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=79.00 E-value=3.8 Score=20.98 Aligned_cols=71 Identities=13% Similarity=0.280 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHH--------HHHHHCCCCEEEECC
Q ss_conf 999999999980998265453010387999988987653598299997267668511--------346522420366125
Q gi|254780157|r 19 IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPG--------MIAAMTSLPVLGVPI 90 (165)
Q Consensus 19 ~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpg--------vva~~t~~PVIgVP~ 90 (165)
..++....++..|++++..+..-+ | ...+++..+..+++.+|-+.=..+.+.. -+.-++..||.-||.
T Consensus 88 ~l~~~~~~~~~~~v~~~~~~~~G~--~--~~~I~~~a~~~~~dlIVmG~~g~~~~~~~~lGSvs~~v~~~a~cPVlvV~~ 163 (175)
T 2gm3_A 88 LLEFFVNKCHEIGVGCEAWIKTGD--P--KDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKR 163 (175)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEESC--H--HHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEEEECC--H--HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEC
T ss_conf 999999999974982688985346--4--277899999728988996289998666662287999998177988899958
Q ss_pred CCC
Q ss_conf 776
Q gi|254780157|r 91 ISQ 93 (165)
Q Consensus 91 ~~~ 93 (165)
...
T Consensus 164 ~~~ 166 (175)
T 2gm3_A 164 NAD 166 (175)
T ss_dssp CGG
T ss_pred CCC
T ss_conf 877
No 51
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=78.53 E-value=3.9 Score=20.89 Aligned_cols=83 Identities=11% Similarity=0.105 Sum_probs=60.5
Q ss_pred CCEEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH-
Q ss_conf 874999958816989---9999999999809982654530103879999889876535982999972676685113465-
Q gi|254780157|r 4 APPVAIIMGSQSDWK---IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA- 79 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~---~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~- 79 (165)
+-|++++.-+-+|-- +.+-..+.++++|++.. +..+.-.+++..+.++++..++++.||...--...+...+..
T Consensus 2 ~~~Ig~~v~~~~~~~~~~~~~~~~~~a~~~G~~~~--v~~~~~d~~~q~~~i~~li~~~vDgIii~~~d~~~~~~~~~~a 79 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF--VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 79 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEE--EEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEE--EEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 71999994889998999999999999997399899--9959999999999999999769999998176223148999999
Q ss_pred -HCCCCEEEE
Q ss_conf -224203661
Q gi|254780157|r 80 -MTSLPVLGV 88 (165)
Q Consensus 80 -~t~~PVIgV 88 (165)
....|||.+
T Consensus 80 ~~~gipvV~~ 89 (313)
T 3m9w_A 80 KQEGIKVLAY 89 (313)
T ss_dssp HTTTCEEEEE
T ss_pred HHCCCCEEEE
T ss_conf 9869968970
No 52
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium LT2} SCOP: c.93.1.1 PDB: 1tm2_A 3ejw_A*
Probab=78.39 E-value=4 Score=20.86 Aligned_cols=86 Identities=17% Similarity=0.074 Sum_probs=62.6
Q ss_pred CCEEEEEECCCCCH---HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 87499995881698---999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSDW---KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~---~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
+.|+++|..+.++- .+.+.+.+.++++|+++.+ +...+.++++-.+.++++..++++.+|....-..++...+.-.
T Consensus 3 ~~~I~~i~~~~~n~f~~~~~~G~~~~a~~~g~~v~~-~~~~~~d~~~q~~~i~~~i~~~vDgiii~~~~~~~~~~~~~~~ 81 (316)
T 1tjy_A 3 AERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTY-DGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRA 81 (316)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCEEEE-CCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEE-EECCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH
T ss_conf 778999958899989999999999999982998999-9799999999999999999769998998252011125899999
Q ss_pred C--CCCEEEECC
Q ss_conf 2--420366125
Q gi|254780157|r 81 T--SLPVLGVPI 90 (165)
Q Consensus 81 t--~~PVIgVP~ 90 (165)
. ..||+.+-.
T Consensus 82 ~~~gipvv~~d~ 93 (316)
T 1tjy_A 82 MQRGVKILTWDS 93 (316)
T ss_dssp HHTTCEEEEESS
T ss_pred HHCCCCEEEECC
T ss_conf 864995685035
No 53
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B}
Probab=78.17 E-value=3.5 Score=21.24 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=43.9
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE------------------------EEEHHCCHHHHHHHHHHHH
Q ss_conf 9988749999588169899999999999809982654------------------------5301038799998898765
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR------------------------IISAHRTPDRLIEFAKNAR 56 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~------------------------V~SAHR~p~~l~~~~~~~~ 56 (165)
|.|+-||++|.|+.| -+...+++.|.+.|....+. +..=.+.++.+.++.+...
T Consensus 9 M~l~~KvalVTGas~--GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMG--GIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK 86 (256)
T ss_dssp ----CEEEEETTTTS--HHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 874998899938786--899999999998799899980897488999999998439968999767899999999999999
Q ss_pred H--CCCEEEEEEECCC
Q ss_conf 3--5982999972676
Q gi|254780157|r 57 F--EGFKLIIAGAGGA 70 (165)
Q Consensus 57 ~--~~~~viIa~AG~a 70 (165)
+ ..++++|..||..
T Consensus 87 ~~~G~iDiLVnnAG~~ 102 (256)
T 3ezl_A 87 AEVGEIDVLVNNAGIT 102 (256)
T ss_dssp HHTCCEEEEEECCCCC
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9749998999899889
No 54
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.09 E-value=2 Score=22.76 Aligned_cols=65 Identities=18% Similarity=0.170 Sum_probs=40.3
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCC------------------------HHHHHHHHHHHH--
Q ss_conf 887499995881698999999999998099826545301038------------------------799998898765--
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRT------------------------PDRLIEFAKNAR-- 56 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~------------------------p~~l~~~~~~~~-- 56 (165)
|+||+++|.|+.| -+..+.++.|-+-|-.+.+.. .-|+ ++.+.++.+...
T Consensus 1 Ms~K~ilITGas~--GIG~a~a~~La~~G~~~~Vi~--~~R~~~~~~~l~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~ 76 (250)
T 1yo6_A 1 MSPGSVVVTGANR--GIGLGLVQQLVKDKNIRHIIA--TARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCCSEEEESSCSS--HHHHHHHHHHHTCTTCCEEEE--EESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCCCEEEE--EECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9689999948887--999999999997799878999--969999999998721896599998558999999999999998
Q ss_pred --HCCCEEEEEEECCCC
Q ss_conf --359829999726766
Q gi|254780157|r 57 --FEGFKLIIAGAGGAA 71 (165)
Q Consensus 57 --~~~~~viIa~AG~aa 71 (165)
..+++++|.-||...
T Consensus 77 ~g~~~iDilinNAG~~~ 93 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLL 93 (250)
T ss_dssp HGGGCCCEEEECCCCCC
T ss_pred HCCCCEEEEEECCCCCC
T ss_conf 48998589997885467
No 55
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=78.06 E-value=2 Score=22.84 Aligned_cols=88 Identities=18% Similarity=0.160 Sum_probs=52.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEH-----HCCHHHHHH----HHHHHHHCCCE-EEEEEECCC
Q ss_conf 99887499995881698999999999998099826545301-----038799998----89876535982-999972676
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISA-----HRTPDRLIE----FAKNARFEGFK-LIIAGAGGA 70 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SA-----HR~p~~l~~----~~~~~~~~~~~-viIa~AG~a 70 (165)
||.+| ++|+=.+---+.+.++..+.|-. .++.+.-.++ .|+++++.+ +++.....+++ ++|||--.+
T Consensus 5 m~~~p-IgifDSGiGGLtv~~~l~~~lP~--~~~iY~~D~~~~PYG~ks~e~i~~~~~~~~~~l~~~~~k~IViACNTas 81 (268)
T 3out_A 5 LDNRP-IGVFDSGIGGLTIVKNLMSILPN--EDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTIS 81 (268)
T ss_dssp CTTSC-EEEEESSSTTHHHHHHHHHHCTT--CCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHH
T ss_pred CCCCC-EEEEECCCCHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
T ss_conf 67998-89996897589999999998899--9989997078899898999999999999999998659998999468388
Q ss_pred CCCHHHHHHH-CCCCEEEECCC
Q ss_conf 6851134652-24203661257
Q gi|254780157|r 71 AHLPGMIAAM-TSLPVLGVPII 91 (165)
Q Consensus 71 aaLpgvva~~-t~~PVIgVP~~ 91 (165)
+.....+-.. ...||||+-+.
T Consensus 82 a~~l~~l~~~~~~ipiigvi~~ 103 (268)
T 3out_A 82 AIAKDIVQEIAKAIPVIDVITA 103 (268)
T ss_dssp HHHHHHHHHHHTTSCEEEHHHH
T ss_pred HHHHHHHHHHCCCCCEECCCHH
T ss_conf 9999999984578873157438
No 56
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=77.88 E-value=4.1 Score=20.77 Aligned_cols=86 Identities=22% Similarity=0.180 Sum_probs=51.8
Q ss_pred CCCCC--EEEEEECCCCCHH--HHHH-HHHHH-HHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCH
Q ss_conf 99887--4999958816989--9999-99999-98099826545301038799998898765359829999726766851
Q gi|254780157|r 1 MNIAP--PVAIIMGSQSDWK--IMKY-AADML-DTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLP 74 (165)
Q Consensus 1 m~~~p--kV~Ii~GS~SD~~--~~~~-a~~~L-~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLp 74 (165)
|+.+| +|+|-+ ..+|.- .+.+ +.+.. +..| +++.+..+.-.+.+-.+.++++.+++++.||....-..++.
T Consensus 1 ~~~~~~y~igvs~-~~~d~~~~~~~~~~~~ea~~~~G--~~l~i~~~~~d~~~q~~~i~~~i~~~vDgIii~p~~~~~~~ 77 (325)
T 2x7x_A 1 MDDTPHFRIGVAQ-CSDDSWRHKMNDEILREAMFYNG--VSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANEAAPMT 77 (325)
T ss_dssp -----CCEEEEEE-SCCSHHHHHHHHHHHHHHTTSSS--CEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSHHHHH
T ss_pred CCCCCCEEEEEEE-ECCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
T ss_conf 9999976999981-07989999999999999998099--88999859999999999999999869979999688716579
Q ss_pred HHHHHHC--CCCEEEEC
Q ss_conf 1346522--42036612
Q gi|254780157|r 75 GMIAAMT--SLPVLGVP 89 (165)
Q Consensus 75 gvva~~t--~~PVIgVP 89 (165)
..+.-.. -.|||.+=
T Consensus 78 ~~i~~a~~~gIPvV~~d 94 (325)
T 2x7x_A 78 PIVEEAYQKGIPVILVD 94 (325)
T ss_dssp HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHCCCCEEECC
T ss_conf 99999998699689637
No 57
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=76.01 E-value=4.6 Score=20.44 Aligned_cols=68 Identities=16% Similarity=0.149 Sum_probs=40.8
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE--------------------EEEEHHCCHHHHHHHHHHHHH--C
Q ss_conf 998874999958816989999999999980998265--------------------453010387999988987653--5
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEA--------------------RIISAHRTPDRLIEFAKNARF--E 58 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~--------------------~V~SAHR~p~~l~~~~~~~~~--~ 58 (165)
|+.+-||++|.|+.|- +...++..|-+.|...-. .+..=...++.+.++++...+ .
T Consensus 1 M~~~gKV~lITGas~G--IG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (281)
T 3m1a_A 1 MSESAKVWLVTGASSG--FGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp ---CCCEEEETTTTSH--HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf 9989989999088869--99999999998799999998999999999997689579999737999999999999999829
Q ss_pred CCEEEEEEECCC
Q ss_conf 982999972676
Q gi|254780157|r 59 GFKLIIAGAGGA 70 (165)
Q Consensus 59 ~~~viIa~AG~a 70 (165)
.++++|-.||..
T Consensus 79 ~iDiLvnNAG~~ 90 (281)
T 3m1a_A 79 RVDVLVNNAGRT 90 (281)
T ss_dssp CCSEEEECCCCE
T ss_pred CCCEEEECCCCC
T ss_conf 984999889788
No 58
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structural genomics, protein structure initiative; 2.20A {Bacteroides fragilis nctc 9343}
Probab=75.73 E-value=4.7 Score=20.39 Aligned_cols=132 Identities=12% Similarity=0.158 Sum_probs=78.0
Q ss_pred CCEEE-EEECCCCC-H--HH---HHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHH
Q ss_conf 87499-99588169-8--99---999999999809982654530103879999889876535982999972676685113
Q gi|254780157|r 4 APPVA-IIMGSQSD-W--KI---MKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGM 76 (165)
Q Consensus 4 ~pkV~-Ii~GS~SD-~--~~---~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgv 76 (165)
+.+++ |+..+.++ + .+ ++++++.++.+||...+...+ .-.+....+.++++..++++.||....-..+....
T Consensus 8 ~~~i~~iip~~~~~~y~~~~~~G~~~aa~e~~~~~i~~~i~~~~-~~d~~~q~~~l~~~i~~~vDgIii~~~~~~~~~~~ 86 (304)
T 3gbv_A 8 KYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYD-PYDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGF 86 (304)
T ss_dssp CEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEEC-SSCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC-CCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
T ss_conf 88899998289999899999999999999715488799999689-89999999999999975999999946651405999
Q ss_pred HHHHC--CCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC------------------
Q ss_conf 46522--4203661257766675001699840356986204431675312289999999706------------------
Q gi|254780157|r 77 IAAMT--SLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL------------------ 136 (165)
Q Consensus 77 va~~t--~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~------------------ 136 (165)
+.-.. ..|||.+=. . .|..-+...+ +.|+ +.++.++++.|.-
T Consensus 87 i~~~~~~gipvv~~d~--~-------------~~~~~~~~~v--~~d~-~~~G~~aa~~l~~~~~~~~~i~~~~~~~~g~ 148 (304)
T 3gbv_A 87 TDALNELGIPYIYIDS--Q-------------IKDAPPLAFF--GQNS-HQSGYFAARMLMLLAVNDREIVIFRKIHEGV 148 (304)
T ss_dssp HHHHHHHTCCEEEESS--C-------------CTTSCCSEEE--ECCH-HHHHHHHHHHHHHHSTTCSEEEEEEEEBTTB
T ss_pred HHHHHHCCCEEEEEEC--C-------------CCCCCCEEEE--CCCH-HHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 9999975993999942--4-------------3356520487--4788-9999999999999723885299993356889
Q ss_pred -CCHHHHHHHHHHHHHHHH
Q ss_conf -999999999999999999
Q gi|254780157|r 137 -DDKELTDRLNEWRTQQTI 154 (165)
Q Consensus 137 -~d~~i~~kl~~~r~~~~~ 154 (165)
..+...+|..-|+.-+.+
T Consensus 149 ~~~~~~~~R~~Gf~~~l~~ 167 (304)
T 3gbv_A 149 IGSNQQESREIGFRQYMQE 167 (304)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
T ss_conf 8877999999999999998
No 59
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=75.42 E-value=4.8 Score=20.34 Aligned_cols=67 Identities=24% Similarity=0.196 Sum_probs=32.0
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCC------------------------CCEEEEEEEHHCCHHHHHHHHHHHH
Q ss_conf 9988749999588169899999999999809------------------------9826545301038799998898765
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLG------------------------IDYEARIISAHRTPDRLIEFAKNAR 56 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~g------------------------I~~~~~V~SAHR~p~~l~~~~~~~~ 56 (165)
|+.+-||++|.|+.+ -+...+++.|-+.| ..+....+ =-+.++.+.++++...
T Consensus 7 ~~L~gKvalITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~-Dv~~~~~v~~~~~~~~ 83 (255)
T 1fmc_A 7 LRLDGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC-DITSEQELSALADFAI 83 (255)
T ss_dssp GCCTTCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE-CCCCHHHHHHHHHHHH
T ss_conf 889999899938975--8999999999987998999979989999999999963993899992-2899999999999999
Q ss_pred H--CCCEEEEEEECCC
Q ss_conf 3--5982999972676
Q gi|254780157|r 57 F--EGFKLIIAGAGGA 70 (165)
Q Consensus 57 ~--~~~~viIa~AG~a 70 (165)
+ ..++++|..||..
T Consensus 84 ~~~G~iDiLVnnAG~~ 99 (255)
T 1fmc_A 84 SKLGKVDILVNNAGGG 99 (255)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9749998999899999
No 60
>3gr6_A Enoyl-[acyl-carrier-protein] reductase [NADH]; enoyl reductase, NADP, triclosan, oxidoreductase; HET: NAP TCL; 2.28A {Staphylococcus aureus} PDB: 3gns_A* 3gnt_A
Probab=74.86 E-value=4.9 Score=20.25 Aligned_cols=55 Identities=24% Similarity=0.210 Sum_probs=41.4
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCC
Q ss_conf 99887499995881698999999999998099826545301038799998898765359
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEG 59 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~ 59 (165)
|+++-|+++|.|..|+.-+...+++.|.+.|.+.- -..|..+.+.+..+..+..+
T Consensus 6 ~~l~~K~~lItGaas~~GIG~aiA~~la~~G~~V~----i~~r~~~~~~~~~~~~~~~~ 60 (260)
T 3gr6_A 6 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLV----FTYRKERSRKELEKLLEQLN 60 (260)
T ss_dssp CCCSSCEEEEECCCSTTCHHHHHHHHHHHTTCEEE----EEESSHHHHHHHHHHTCSSC
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE----EEECCHHHHHHHHHHHHHCC
T ss_conf 79899989998999984799999999998799999----99688888999999987446
No 61
>3ksm_A ABC-type sugar transport system, periplasmic component; PSI- II, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis kctc 2396}
Probab=74.65 E-value=5 Score=20.21 Aligned_cols=86 Identities=17% Similarity=0.183 Sum_probs=54.5
Q ss_pred CEEEEEECCCCCH---HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHH-HCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 7499995881698---999999999998099826545301038799998898765-359829999726766851134652
Q gi|254780157|r 5 PPVAIIMGSQSDW---KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNAR-FEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 5 pkV~Ii~GS~SD~---~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~-~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
||+++|.-+.+|- .+.+.+.+.++++|+...+...+.--.+++-.+.+++.. .++++.+|...--..+....+...
T Consensus 1 pkI~~i~~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~~d~~~q~~~i~~~l~~~~~Dgiii~~~~~~~~~~~i~~~ 80 (276)
T 3ksm_A 1 PKLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQY 80 (276)
T ss_dssp CEEEEECSCSSSTHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
T ss_conf 98999959999999999999999999982999999958998689999999999998279989999279857779999999
Q ss_pred C--CCCEEEECC
Q ss_conf 2--420366125
Q gi|254780157|r 81 T--SLPVLGVPI 90 (165)
Q Consensus 81 t--~~PVIgVP~ 90 (165)
. ..|||-+-.
T Consensus 81 ~~~~Ipvv~~d~ 92 (276)
T 3ksm_A 81 RARNIPVLVVDS 92 (276)
T ss_dssp HHTTCCEEEESS
T ss_pred HHCCCCEEEECC
T ss_conf 977994999725
No 62
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=74.23 E-value=5.1 Score=20.15 Aligned_cols=63 Identities=10% Similarity=0.125 Sum_probs=48.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCE----------------------EEEEEEHHCCHHHHHHHHHHHHHCCCE
Q ss_conf 8749999588169899999999999809982----------------------654530103879999889876535982
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDY----------------------EARIISAHRTPDRLIEFAKNARFEGFK 61 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~----------------------~~~V~SAHR~p~~l~~~~~~~~~~~~~ 61 (165)
+|.-.|-++|=+=..+++|+.+.|+++|+.+ +..|.|-.=+++.+.++++.+..+|++
T Consensus 1 ~~~~~vh~~~W~~~~i~~~~~~yl~~~G~t~I~l~Pv~e~~~~~~wy~gY~~~~Y~i~~r~Gt~~dlk~LV~~aH~~GI~ 80 (448)
T 1g94_A 1 TPTTFVHLFEWNWQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVD 80 (448)
T ss_dssp CCCCEEEETTCCHHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 98508980278779999999999997099889969483689999874468887743689999999999999999987999
Q ss_pred EEEEE
Q ss_conf 99997
Q gi|254780157|r 62 LIIAG 66 (165)
Q Consensus 62 viIa~ 66 (165)
||+=+
T Consensus 81 VilD~ 85 (448)
T 1g94_A 81 IYVDT 85 (448)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 99998
No 63
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=72.06 E-value=2.6 Score=22.01 Aligned_cols=86 Identities=19% Similarity=0.154 Sum_probs=57.4
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEH-----HCCHHHHHH----HHHHHHHCCCE-EEEEEECCC
Q ss_conf 99887499995881698999999999998099826545301-----038799998----89876535982-999972676
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISA-----HRTPDRLIE----FAKNARFEGFK-LIIAGAGGA 70 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SA-----HR~p~~l~~----~~~~~~~~~~~-viIa~AG~a 70 (165)
|+.+| ++|+=-+---+.+.++..+.|-. .++.+.-.++ .|+.+++.+ .++....++++ ++|||--.+
T Consensus 10 m~~~p-IgvFDSGvGGLtvl~~l~~~lP~--~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~l~~~~~~~IViACNTas 86 (273)
T 2oho_A 10 MDTRP-IGFLDSGVGGLTVVCELIRQLPH--EKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFACNTAT 86 (273)
T ss_dssp CCCCC-EEEEESSSTTHHHHHHHHHHCTT--CCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH
T ss_pred CCCCC-EEEEECCCCHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 79998-89997897779999999997899--8999994688899899999999999999999999606784999828588
Q ss_pred CCCHHHHHHHCCCCEEEEC
Q ss_conf 6851134652242036612
Q gi|254780157|r 71 AHLPGMIAAMTSLPVLGVP 89 (165)
Q Consensus 71 aaLpgvva~~t~~PVIgVP 89 (165)
+.---.+-.....|+||+.
T Consensus 87 a~al~~lr~~~~~piig~i 105 (273)
T 2oho_A 87 AVAWEEVKAALDIPVLGVV 105 (273)
T ss_dssp HHHHHHHHHHCSSCEEESH
T ss_pred HHHHHHHHHHCCCCEEECC
T ss_conf 8759999864798776256
No 64
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=71.88 E-value=5.8 Score=19.79 Aligned_cols=79 Identities=19% Similarity=0.288 Sum_probs=46.6
Q ss_pred CCEEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 874999958816989---99999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSDWK---IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~---~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
..+|+|+|=|+.+.| ...++...|+..||+|......-.-....+.++....- +.
T Consensus 15 ~~~Vvvfskgt~~~P~Cp~c~~ak~lL~~~gi~~~~~~~~~~~~~~~~~~~l~~~t----------------------g~ 72 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFS----------------------EW 72 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHH----------------------TC
T ss_pred HCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC----------------------CC
T ss_conf 09889997888999988779999999987399862688755778999999876302----------------------35
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 24203661257766675001699840
Q gi|254780157|r 81 TSLPVLGVPIISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 81 t~~PVIgVP~~~~~~~G~dallS~vq 106 (165)
.+.|-| =+.+...+|.|-|..+.+
T Consensus 73 ~TvPqI--FI~G~~IGG~d~l~~l~~ 96 (121)
T 3gx8_A 73 PTIPQL--YVNKEFIGGCDVITSMAR 96 (121)
T ss_dssp CSSCEE--EETTEEEESHHHHHHHHH
T ss_pred CCCCEE--EECCEEECCHHHHHHHHH
T ss_conf 668838--899989878899999998
No 65
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=71.64 E-value=5.9 Score=19.76 Aligned_cols=48 Identities=21% Similarity=0.180 Sum_probs=26.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHH
Q ss_conf 887499995881698999999999998099826545301038799998898765
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNAR 56 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~ 56 (165)
+.-||++|.|+.| -+...+++.|-+-|.. |+-..|+.+++.+..++.+
T Consensus 26 L~gKvalITGas~--GIG~aiA~~la~~Ga~----Vv~~~r~~~~l~~~~~~i~ 73 (270)
T 3ftp_A 26 LDKQVAIVTGASR--GIGRAIALELARRGAM----VIGTATTEAGAEGIGAAFK 73 (270)
T ss_dssp TTTCEEEETTCSS--HHHHHHHHHHHHTTCE----EEEEESSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHHH
T ss_conf 7999899938685--8999999999986999----9999798899999999999
No 66
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.97A {Archaeoglobus fulgidus}
Probab=70.32 E-value=6.3 Score=19.57 Aligned_cols=48 Identities=15% Similarity=0.200 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 99999999998099826545301038799998898765359829999726
Q gi|254780157|r 19 IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAG 68 (165)
Q Consensus 19 ~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG 68 (165)
..+++.+.++..|++++..+.-.+..|.+. +++.++..+++.+|.++-
T Consensus 79 ~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~--I~~~a~~~~adLIV~G~~ 126 (155)
T 3dlo_A 79 TLSWAVSIIRKEGAEGEEHLLVRGKEPPDD--IVDFADEVDAIAIVIGIR 126 (155)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSSCHHHH--HHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCHHHH--HHHHHHHCCCCEEEECCC
T ss_conf 999999999984999489999957898999--999998729989985689
No 67
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=69.54 E-value=6.5 Score=19.47 Aligned_cols=49 Identities=16% Similarity=0.261 Sum_probs=35.5
Q ss_pred CCCCEEEEEECCCCC------HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHH
Q ss_conf 988749999588169------8999999999998099826545301038799998
Q gi|254780157|r 2 NIAPPVAIIMGSQSD------WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIE 50 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD------~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~ 50 (165)
++.|++-..+-..|| =|++.++...|++.||+|++..+..-+.|+.+.+
T Consensus 14 ~~~~~~~l~~~a~~~~~~~~~CPf~~rvri~L~ekgi~ye~~~vd~~~k~~~~~~ 68 (267)
T 2ahe_A 14 DKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQN 68 (267)
T ss_dssp --CCCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTTSCCHHHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
T ss_conf 7899779984158998868899579999999999299987998788889899998
No 68
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase, center for structural genomics of infectious diseases; 2.35A {Vibrio cholerae}
Probab=68.46 E-value=6.9 Score=19.32 Aligned_cols=86 Identities=17% Similarity=0.171 Sum_probs=51.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHC-CCCEEEEEEEHHCCH------------------------------HHHHHHH
Q ss_conf 874999958816989999999999980-998265453010387------------------------------9999889
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTL-GIDYEARIISAHRTP------------------------------DRLIEFA 52 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~-gI~~~~~V~SAHR~p------------------------------~~l~~~~ 52 (165)
..||.++.|...|+-.+......|++- ++++.+-+.+.|+.. .-+..+.
T Consensus 25 MkKI~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~TGqH~d~~~~~~~~~~i~~d~~~~~~~~~~s~~~~~~~~i~~~~ 104 (396)
T 3dzc_A 25 MKKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQ 104 (396)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 86189999703709999999999973899877999908998899999985498887322158899989999999999999
Q ss_pred HHHHHCCCEEEEEEECCCCCCHHHHHHH-CCCCEEEEC
Q ss_conf 8765359829999726766851134652-242036612
Q gi|254780157|r 53 KNARFEGFKLIIAGAGGAAHLPGMIAAM-TSLPVLGVP 89 (165)
Q Consensus 53 ~~~~~~~~~viIa~AG~aaaLpgvva~~-t~~PVIgVP 89 (165)
+..+...+++++....+-.+|++++++. ...||+-+=
T Consensus 105 ~~~~~~kpD~VlV~GDr~e~la~a~aa~~~~ipi~Hie 142 (396)
T 3dzc_A 105 QVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp HHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred HHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 99997199999995888622548999998299789997
No 69
>3gjz_A Microcin immunity protein MCCF; niaid structural genomic centers for infectious diseases, csgid, immune system, structural genomics; 2.10A {Bacillus anthracis str}
Probab=67.91 E-value=7 Score=19.25 Aligned_cols=97 Identities=19% Similarity=0.177 Sum_probs=60.9
Q ss_pred EEEEEECCC----CCHHHHHHHHHHHHHCCCCEEEEE--------EEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 499995881----698999999999998099826545--------30103879999889876535982999972676685
Q gi|254780157|r 6 PVAIIMGSQ----SDWKIMKYAADMLDTLGIDYEARI--------ISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHL 73 (165)
Q Consensus 6 kV~Ii~GS~----SD~~~~~~a~~~L~~~gI~~~~~V--------~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaL 73 (165)
+|+|+.=|. .|....+.+.+.|+.+|.+....- .++ -.-+|..++.+-..+.++++|+++-|+.++.
T Consensus 15 ~I~viAPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag-t~~~Ra~dl~~a~~d~~i~aI~~~rGG~g~~ 93 (336)
T 3gjz_A 15 TIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSG-SIQERAKELNALIRNPNVSCIMSTIGGMNSN 93 (336)
T ss_dssp EEEEECSSCCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSS-CHHHHHHHHHHHHTCTTEEEEEESCCCSCGG
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
T ss_conf 999995898665549999999999998689999877520334675679-9999999999985488889999877521199
Q ss_pred ---H----HHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf ---1----1346522420366125776667500169984035698
Q gi|254780157|r 74 ---P----GMIAAMTSLPVLGVPIISQTLGGIDSLLSIVQMPAGV 111 (165)
Q Consensus 74 ---p----gvva~~t~~PVIgVP~~~~~~~G~dallS~vqMP~Gv 111 (165)
| -.+. ..+++.||- .-+.+|+..++--.|.
T Consensus 94 rlLp~LD~~~i~-~~PK~fiGy-------SDiTaL~~al~~k~g~ 130 (336)
T 3gjz_A 94 SLLPYIDYDAFQ-NNPKIMIGY-------SDATALLLGIYAKTGI 130 (336)
T ss_dssp GGGGGCCHHHHH-HSCCEEEEC-------GGGHHHHHHHHHHHCC
T ss_pred HHHHHCCHHHHH-HCCEEEEEC-------CHHHHHHHHHHHHCCC
T ss_conf 886543643573-188089965-------0689999999996498
No 70
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.53 E-value=7.2 Score=19.20 Aligned_cols=76 Identities=11% Similarity=0.180 Sum_probs=49.1
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCC
Q ss_conf 74999958816989999999999980998265453010387999988987653598299997267668511346522420
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLP 84 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~P 84 (165)
.+|.|.+ ++.=|+..++...|+.++|+|+..-...+.....+.+.++..- +..+.|
T Consensus 27 ~~Vviys--k~~Cp~C~~ak~lL~~~~i~~~~~~ld~~~~~~~~~~~l~~~t----------------------G~~tvP 82 (130)
T 2cq9_A 27 NCVVIFS--KTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMT----------------------GERTVP 82 (130)
T ss_dssp SSEEEEE--CSSCSHHHHHHHHHHHHTCCCEEEETTTSTTHHHHHHHHHHHH----------------------SSCCSS
T ss_pred CCEEEEE--CCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHC----------------------CCCCCC
T ss_conf 9889997--9989579999999998299627999833565078999999955----------------------999869
Q ss_pred EEEECCCCCCCCCCCCHHHHHH
Q ss_conf 3661257766675001699840
Q gi|254780157|r 85 VLGVPIISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 85 VIgVP~~~~~~~G~dallS~vq 106 (165)
.|=+ .+...+|.|-|..+.+
T Consensus 83 ~VfI--~g~~IGG~del~~l~~ 102 (130)
T 2cq9_A 83 RIFV--NGTFIGGATDTHRLHK 102 (130)
T ss_dssp EEEE--TTEEEEEHHHHHHHHH
T ss_pred EEEE--CCEEEECHHHHHHHHH
T ss_conf 5999--9989836899999998
No 71
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=67.23 E-value=2.8 Score=21.89 Aligned_cols=30 Identities=20% Similarity=0.395 Sum_probs=24.2
Q ss_pred CCCEEEEEE--CCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 887499995--8816989999999999980998265
Q gi|254780157|r 3 IAPPVAIIM--GSQSDWKIMKYAADMLDTLGIDYEA 36 (165)
Q Consensus 3 ~~pkV~Ii~--GS~SD~~~~~~a~~~L~~~gI~~~~ 36 (165)
|+|||+||- ||-.|.++ ...|++.|.++.+
T Consensus 1 ~k~ki~ii~~~G~n~~~~v----~~Al~~lG~~~~i 32 (213)
T 3d54_D 1 MKPRACVVVYPGSNCDRDA----YHALEINGFEPSY 32 (213)
T ss_dssp CCCEEEEECCTTEEEHHHH----HHHHHTTTCEEEE
T ss_pred CCCEEEEEECCCCCHHHHH----HHHHHHCCCEEEE
T ss_conf 9964999924971869999----9999986990899
No 72
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=67.17 E-value=7.3 Score=19.16 Aligned_cols=87 Identities=13% Similarity=0.087 Sum_probs=64.1
Q ss_pred EEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH--
Q ss_conf 4999958816989---99999999998099826545301038799998898765359829999726766851134652--
Q gi|254780157|r 6 PVAIIMGSQSDWK---IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM-- 80 (165)
Q Consensus 6 kV~Ii~GS~SD~~---~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~-- 80 (165)
+.++|+.+-+|-- +.+.+.+.++++|+..++...+....+.+..+.++++...+++.||...-........+...
T Consensus 3 ~~avi~~~~~npf~~~~~~g~~~~a~~~G~~~~~~~~~~~~d~~~q~~~i~~~i~~~~Dgii~~~~~~~~~~~~~~~~~~ 82 (288)
T 1gud_A 3 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWK 82 (288)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 79999798988899999999999999749979999758989999999999999965999899733564111799999985
Q ss_pred CCCCEEEECCCC
Q ss_conf 242036612577
Q gi|254780157|r 81 TSLPVLGVPIIS 92 (165)
Q Consensus 81 t~~PVIgVP~~~ 92 (165)
...|||.+....
T Consensus 83 ~~Ipvv~~~~~~ 94 (288)
T 1gud_A 83 KGIYLVNLDEKI 94 (288)
T ss_dssp TTCEEEEESSCC
T ss_pred CCCEEEEECCCC
T ss_conf 898499935777
No 73
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=67.14 E-value=7.3 Score=19.15 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=56.6
Q ss_pred EEEEEECCCCCHHHH----HHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH--
Q ss_conf 499995881698999----99999999809982654530103879999889876535982999972676685113465--
Q gi|254780157|r 6 PVAIIMGSQSDWKIM----KYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA-- 79 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~----~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~-- 79 (165)
+++++.-|.+ |+. +.+.+..+++|+++.+. ...--++++..+.++++..++++.||.......++...+..
T Consensus 3 ~ig~v~~~~n--Pf~~~~~~G~~~aa~~~g~~l~~~-~~~~~d~~~q~~~i~~~i~~~vDgIii~~~~~~~~~~~~~~a~ 79 (313)
T 2h3h_A 3 TIGVIGKSVH--PYWSQVEQGVKAAGKALGVDTKFF-VPQKEDINAQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKAL 79 (313)
T ss_dssp EEEEECSCSS--HHHHHHHHHHHHHHHHHTCEEEEE-CCSSSCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHH
T ss_pred EEEEECCCCC--HHHHHHHHHHHHHHHHCCCEEEEE-ECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
T ss_conf 9999589999--799999999999999809979999-7999999999999999997599999997762211259999999
Q ss_pred HCCCCEEEEC
Q ss_conf 2242036612
Q gi|254780157|r 80 MTSLPVLGVP 89 (165)
Q Consensus 80 ~t~~PVIgVP 89 (165)
....|||.+-
T Consensus 80 ~~gipvv~~d 89 (313)
T 2h3h_A 80 EMGIPVVTLD 89 (313)
T ss_dssp HTTCCEEEES
T ss_pred HCCCCEEEEC
T ss_conf 6699489944
No 74
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=66.63 E-value=7.5 Score=19.09 Aligned_cols=46 Identities=17% Similarity=0.275 Sum_probs=33.3
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHH
Q ss_conf 99887499995881698999999999998099826545301038799998898
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAK 53 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~ 53 (165)
|+++-|+++|.|+.| -+...+++.|.+-| .+...+|+++++.+..+
T Consensus 1 M~lk~K~alITGas~--GIG~a~a~~la~~g-----~vi~~~r~~~~~~~~~~ 46 (245)
T 3e9n_A 1 MSLKKKIAVVTGATG--GMGIEIVKDLSRDH-----IVYALGRNPEHLAALAE 46 (245)
T ss_dssp -----CEEEEESTTS--HHHHHHHHHHTTTS-----EEEEEESCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCC-----CEEEEECCHHHHHHHHH
T ss_conf 999998999928975--89999999998599-----99999899999999998
No 75
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=66.59 E-value=7.5 Score=19.08 Aligned_cols=148 Identities=9% Similarity=0.050 Sum_probs=68.4
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHH-HHCCCCEEEEEEE-----------HHCCHHHHHHHHHHHHHCCCEEEEEEE---
Q ss_conf 8874999958816989999999999-9809982654530-----------103879999889876535982999972---
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADML-DTLGIDYEARIIS-----------AHRTPDRLIEFAKNARFEGFKLIIAGA--- 67 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L-~~~gI~~~~~V~S-----------AHR~p~~l~~~~~~~~~~~~~viIa~A--- 67 (165)
|+.||.+|.||...-..-+...+.+ +.++-..++.+.. .--.++.+.++.+...+-+ .++++.-
T Consensus 1 MskKIl~i~GS~R~~s~t~~la~~~~~~l~~~~ev~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~aD-~iI~~sP~Y~ 79 (192)
T 3fvw_A 1 MSKRILFIVGSFSEGSFNRQLAKKAETIIGDRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEAD-AIWIFSPVYN 79 (192)
T ss_dssp --CEEEEEESCCSTTCHHHHHHHHHHHHHTTSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCS-EEEEECCCBT
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-CEEEECCHHC
T ss_conf 998499998999999879999999998757997799986753566884112378889999999996599-5899353123
Q ss_pred -CCCCCCHHHHHH---------------HCCCCEEEECCCCCCCCCCC---CHHHHHHCCCCCCC-EE-EECCCCCCHHH
Q ss_conf -676685113465---------------22420366125776667500---16998403569862-04-43167531228
Q gi|254780157|r 68 -GGAAHLPGMIAA---------------MTSLPVLGVPIISQTLGGID---SLLSIVQMPAGVPV-GT-MAIGQSGAINA 126 (165)
Q Consensus 68 -G~aaaLpgvva~---------------~t~~PVIgVP~~~~~~~G~d---allS~vqMP~Gvpv-at-v~vg~~~~~NA 126 (165)
|++++|-..+.- +..+|+.-+-...+. .|.. .|-.++.-. |..+ .. +.++.. .
T Consensus 80 ~~~~~~lK~~iD~~~~~~~~~~~~~~~~~~~K~~~~v~~~~g~-~~~~~~~~L~~~l~~l-g~~~v~~~~~v~~~--~-- 153 (192)
T 3fvw_A 80 YAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGA-SPEEVFEDYRSLLPFI-RMHLVDQLTGVPIN--S-- 153 (192)
T ss_dssp TBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC----CCSHHHHHHHHHT-TCEECCCCEEECCC--T--
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC-HHHHHHHHHHHHHHHC-CCEEECCEEEEECC--H--
T ss_conf 4578899999998653123456666520269959999978983-7999999999999987-99996876588553--5--
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999997069999999999999999999984
Q gi|254780157|r 127 SLLAVAILALDDKELTDRLNEWRTQQTISISE 158 (165)
Q Consensus 127 al~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~ 158 (165)
-.+. +=-...+++..++|.++-+++...+++
T Consensus 154 ~~~~-~~~~~~~e~~~~~l~~~~~~l~~~~~~ 184 (192)
T 3fvw_A 154 EAWS-TGILKVSAEKLAELSAQADALLSAIEN 184 (192)
T ss_dssp THHH-HCCCCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHCC-CCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 5316-998567999999999999999999998
No 76
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=65.87 E-value=7.3 Score=19.15 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=27.9
Q ss_pred CCCCCEEEEEECCCCC-HHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 9988749999588169-8999999999998099826545
Q gi|254780157|r 1 MNIAPPVAIIMGSQSD-WKIMKYAADMLDTLGIDYEARI 38 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD-~~~~~~a~~~L~~~gI~~~~~V 38 (165)
|+-+|||.||..|+-. ...++.+.+-+++-|++.++.-
T Consensus 1 ~~~~~kvliiy~S~GnT~~la~ai~~Ga~~~G~ev~~~~ 39 (199)
T 2zki_A 1 MSCKPNILVLFYGYGSIVELAKEIGKGAEEAGAEVKIRR 39 (199)
T ss_dssp --CCCEEEEEECCSSHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 999986999981835899999999998876498899997
No 77
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=65.64 E-value=7.8 Score=18.97 Aligned_cols=85 Identities=13% Similarity=0.092 Sum_probs=46.6
Q ss_pred CCC-EEEEEECCCCCHHHHHHHHHHHHHCC--CCEEEEEEEHHCCH------------------------------HHHH
Q ss_conf 887-49999588169899999999999809--98265453010387------------------------------9999
Q gi|254780157|r 3 IAP-PVAIIMGSQSDWKIMKYAADMLDTLG--IDYEARIISAHRTP------------------------------DRLI 49 (165)
Q Consensus 3 ~~p-kV~Ii~GS~SD~~~~~~a~~~L~~~g--I~~~~~V~SAHR~p------------------------------~~l~ 49 (165)
|+. ||.++.|.-.|+-.+......|++.. +++.+-+.+.|+.. .-+.
T Consensus 25 M~kmKIl~v~GTRpe~ikl~pli~~l~~~~~~~~~~li~TGqH~d~~~~~~~~~~i~~d~~l~i~~~~~~~~~~~~~~i~ 104 (403)
T 3ot5_A 25 MAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMN 104 (403)
T ss_dssp -CCEEEEEEECSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-CCCHHHHHHHHHH
T ss_pred CCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 86855999997368499999999999838888887999907997899999986199988334348899999999999999
Q ss_pred HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHC-CCCEEE
Q ss_conf 88987653598299997267668511346522-420366
Q gi|254780157|r 50 EFAKNARFEGFKLIIAGAGGAAHLPGMIAAMT-SLPVLG 87 (165)
Q Consensus 50 ~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t-~~PVIg 87 (165)
.+.+..+...+++++....+...|++++|+.- ..||+=
T Consensus 105 ~~~~~~~~~kPD~vlV~GDr~~~la~alaa~~~~Ipi~H 143 (403)
T 3ot5_A 105 GINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGH 143 (403)
T ss_dssp HHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEE
T ss_conf 999999973999999968880489999999981997899
No 78
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=65.22 E-value=7.9 Score=18.91 Aligned_cols=54 Identities=24% Similarity=0.338 Sum_probs=29.0
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCE
Q ss_conf 988749999588169899999999999809982654530103879999889876535982
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFK 61 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~ 61 (165)
+++-||++|.|+.+ -+...+++.|-+.|.. |+-..|+.+++.+..++.+..+.+
T Consensus 6 ~L~GK~alVTGas~--GIG~aia~~la~~Ga~----V~~~~r~~~~l~~~~~~~~~~g~~ 59 (260)
T 2ae2_A 6 NLEGCTALVTGGSR--GIGYGIVEELASLGAS----VYTCSRNQKELNDCLTQWRSKGFK 59 (260)
T ss_dssp CCTTCEEEEESCSS--HHHHHHHHHHHHTTCE----EEEEESCHHHHHHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHHHHCCCC
T ss_conf 89999899948888--8999999999986999----999969889999999998724982
No 79
>3ojf_A Enoyl-[acyl-carrier-protein] reductase (FABL) (Na; enoyl-ACP reductase, tetramer, rossmann fold, NAD(P) binding oxidoreductase; HET: IMJ NDP; 2.20A {Bacillus cereus} PDB: 2qio_A* 3oje_A
Probab=65.08 E-value=8 Score=18.90 Aligned_cols=71 Identities=13% Similarity=0.065 Sum_probs=45.1
Q ss_pred CC-CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE------------------------EEEHHCCHHHHHHHHHHH
Q ss_conf 99-88749999588169899999999999809982654------------------------530103879999889876
Q gi|254780157|r 1 MN-IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR------------------------IISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 1 m~-~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~------------------------V~SAHR~p~~l~~~~~~~ 55 (165)
|+ ++-|+++|.|..|+.-+...+++.|.+.|...-+. +..-.+.++.+.++.+..
T Consensus 1 M~~L~gK~~lITGas~~rGIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~ 80 (257)
T 3ojf_A 1 MELLQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPCDVTNDEELTACFETI 80 (257)
T ss_dssp CCSSTTCEEEEECCCSTTCHHHHHHHHHHTTTCEEEEEECSSTTHHHHHHHHHHSSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 98868888999899998669999999999879999998288078899999876405872379972259989999999999
Q ss_pred HH--CCCEEEEEEECCCC
Q ss_conf 53--59829999726766
Q gi|254780157|r 56 RF--EGFKLIIAGAGGAA 71 (165)
Q Consensus 56 ~~--~~~~viIa~AG~aa 71 (165)
.. ...+.+|..||...
T Consensus 81 ~~~~g~id~lv~nag~~~ 98 (257)
T 3ojf_A 81 KQEVGTIHGVAHCIAFAN 98 (257)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHHCCCCCEEEEEECCC
T ss_conf 998488670145531133
No 80
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=64.74 E-value=8.1 Score=18.86 Aligned_cols=86 Identities=23% Similarity=0.239 Sum_probs=57.0
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH-----CCHHHHHHH----HHHHHHCCCE-EEEEEECCC
Q ss_conf 998874999958816989999999999980998265453010-----387999988----9876535982-999972676
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAH-----RTPDRLIEF----AKNARFEGFK-LIIAGAGGA 70 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAH-----R~p~~l~~~----~~~~~~~~~~-viIa~AG~a 70 (165)
|+.+.-++|+=-+---+.+.++..+.|-. .++.+.-.++| |+++++.++ ++..+.++++ ++|||--.+
T Consensus 21 m~~~~pIgvfDSGiGGLsv~~~l~~~lP~--~~~iY~~D~a~~PYG~ks~eei~~~~~~~~~~L~~~~~~~IVIACNTas 98 (290)
T 2vvt_A 21 MSNQEAIGLIDSGVGGLTVLKEALKQLPN--ERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLLKKRIKMLVIACNTAT 98 (290)
T ss_dssp CGGGSCEEEEESSSTTHHHHHHHHHHCTT--SCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 47899789996897779999999997899--9989993478998898999999999999999999739996999445288
Q ss_pred CCCHHHHHHHCCCCEEEE
Q ss_conf 685113465224203661
Q gi|254780157|r 71 AHLPGMIAAMTSLPVLGV 88 (165)
Q Consensus 71 aaLpgvva~~t~~PVIgV 88 (165)
+...-.+-.....|+||+
T Consensus 99 a~al~~lr~~~~vpiigv 116 (290)
T 2vvt_A 99 AVALEEIKAALPIPVVGV 116 (290)
T ss_dssp HHHHHHHHHHCSSCEEES
T ss_pred HHHHHHHHHCCCCCEEEC
T ss_conf 999999975089987821
No 81
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=64.72 E-value=8.1 Score=18.85 Aligned_cols=53 Identities=19% Similarity=0.169 Sum_probs=30.5
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCE
Q ss_conf 88749999588169899999999999809982654530103879999889876535982
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFK 61 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~ 61 (165)
.+-||++|.|+.+ -+...+++.|-+.|.. |+-..|+++++.+..++.++.+.+
T Consensus 5 l~gKvalITGas~--GIG~aia~~la~~Ga~----V~~~~r~~~~l~~~~~~l~~~g~~ 57 (262)
T 1zem_A 5 FNGKVCLVTGAGG--NIGLATALRLAEEGTA----IALLDMNREALEKAEASVREKGVE 57 (262)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTCE----EEEEESCHHHHHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHHHHCCCC
T ss_conf 2839899938787--8999999999987998----999989989999999999852993
No 82
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=64.35 E-value=8.2 Score=18.81 Aligned_cols=76 Identities=9% Similarity=0.168 Sum_probs=50.9
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCC
Q ss_conf 74999958816989999999999980998265453010387999988987653598299997267668511346522420
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLP 84 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~P 84 (165)
.+|.|.+- +.=|+..++...|+..||+|...-...+-....+.+.++... +..+.|
T Consensus 49 ~~VvIysk--~~Cp~C~~aK~lL~~~~i~y~~ielD~~~~~~~~~~~L~~~~----------------------G~~tvP 104 (146)
T 2ht9_A 49 NCVVIFSK--TSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMT----------------------GERTVP 104 (146)
T ss_dssp CSEEEEEC--TTCHHHHHHHHHHHHHTCCCEEEEGGGCTTHHHHHHHHHHHH----------------------SCCCSC
T ss_pred CCEEEEEC--CCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHC----------------------CCCCCC
T ss_conf 98899979--989679999999998399518999734220689999999866----------------------998669
Q ss_pred EEEECCCCCCCCCCCCHHHHHH
Q ss_conf 3661257766675001699840
Q gi|254780157|r 85 VLGVPIISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 85 VIgVP~~~~~~~G~dallS~vq 106 (165)
.|= +.+...+|.|-+..+.+
T Consensus 105 qVf--I~Gk~IGG~del~~l~~ 124 (146)
T 2ht9_A 105 RIF--VNGTFIGGATDTHRLHK 124 (146)
T ss_dssp EEE--ETTEEEESHHHHHHHHH
T ss_pred EEE--ECCEEEECHHHHHHHHH
T ss_conf 599--99989847799999998
No 83
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2a str} SCOP: c.23.5.4
Probab=64.08 E-value=8.3 Score=18.78 Aligned_cols=143 Identities=9% Similarity=0.101 Sum_probs=72.2
Q ss_pred CCEEEEEECCCCC----HHHHHHHHHHHHHCCCCEEEEEEE--------HHCCHHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 8749999588169----899999999999809982654530--------1038799998898765359829999726766
Q gi|254780157|r 4 APPVAIIMGSQSD----WKIMKYAADMLDTLGIDYEARIIS--------AHRTPDRLIEFAKNARFEGFKLIIAGAGGAA 71 (165)
Q Consensus 4 ~pkV~Ii~GS~SD----~~~~~~a~~~L~~~gI~~~~~V~S--------AHR~p~~l~~~~~~~~~~~~~viIa~AG~aa 71 (165)
-|||.+|.||... .-.++.+.+.++..|+++++.=.+ ..-.+..+.++.+....-+ -+||+.----+
T Consensus 58 p~KIL~i~GS~R~~S~~~~la~~aa~~l~~~GaeveiiDL~dlPLpd~~~~~~~p~v~~l~~~i~~AD-glIi~TPEYng 136 (279)
T 2fzv_A 58 PVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSE-GQVWCSPERHG 136 (279)
T ss_dssp CCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCS-EEEEEEEEETT
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CEEEECCCCCC
T ss_conf 98699997989987857999999999998769869997766689999766678889999999998589-06996600156
Q ss_pred CCHHHHHHH--------------CCCCEEEECCCCCCCCCCCCHHHHHHCCCCC---CC-EEEECCCC-CCHHHHHHHHH
Q ss_conf 851134652--------------2420366125776667500169984035698---62-04431675-31228999999
Q gi|254780157|r 72 HLPGMIAAM--------------TSLPVLGVPIISQTLGGIDSLLSIVQMPAGV---PV-GTMAIGQS-GAINASLLAVA 132 (165)
Q Consensus 72 aLpgvva~~--------------t~~PVIgVP~~~~~~~G~dallS~vqMP~Gv---pv-atv~vg~~-~~~NAal~A~~ 132 (165)
..||++-.. .-+||--+-.++| .+|..++..+-++.... ++ ..+.++.. ..|+.
T Consensus 137 sipg~LKN~IDwls~~~~~~~~~~gKpvai~s~sgG-~gG~~a~~~Lr~il~~l~~~viP~~v~v~~a~~~FD~------ 209 (279)
T 2fzv_A 137 QITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSGG-SQSFNAVNTLRLLGRWMRMFTIPNQSSIAKAFQEFDA------ 209 (279)
T ss_dssp EECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEECSS-SCCCHHHHHHHHHHHHTTCEECSCCEEETTGGGTBCT------
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCC-CHHHHHHHHHHHHHHHCCCEEECCEEEECCHHHCCCC------
T ss_conf 579999988986055457854105982799740577-1479999999998753676887670485156650198------
Q ss_pred HHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 9706999999999999999999
Q gi|254780157|r 133 ILALDDKELTDRLNEWRTQQTI 154 (165)
Q Consensus 133 Il~~~d~~i~~kl~~~r~~~~~ 154 (165)
-=.+.|++++++|...-++..+
T Consensus 210 dG~l~D~~~~~rl~~l~e~Lv~ 231 (279)
T 2fzv_A 210 AGRMKPSPYYDRIADVMEELVR 231 (279)
T ss_dssp TSCBCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8895899999999999999999
No 84
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=63.30 E-value=8.6 Score=18.69 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=37.8
Q ss_pred CCCCC---EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE------------------------EEEHHCCHHHHHHHHH
Q ss_conf 99887---49999588169899999999999809982654------------------------5301038799998898
Q gi|254780157|r 1 MNIAP---PVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR------------------------IISAHRTPDRLIEFAK 53 (165)
Q Consensus 1 m~~~p---kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~------------------------V~SAHR~p~~l~~~~~ 53 (165)
|+|+. ||++|.|+.| -+...+++.|-+-|....+. +..=-+.++.+.+..+
T Consensus 1 M~M~r~~gK~alITGas~--GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 1 MSLQRFTNRTIVVAGAGR--DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp ---CTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
T ss_conf 998775999899937986--899999999998799999984883678999999999739968999903899999999999
Q ss_pred HHHH--CCCEEEEEEECCC
Q ss_conf 7653--5982999972676
Q gi|254780157|r 54 NARF--EGFKLIIAGAGGA 70 (165)
Q Consensus 54 ~~~~--~~~~viIa~AG~a 70 (165)
+..+ ..++++|-.||..
T Consensus 79 ~~~~~~G~iDiLVnnAG~~ 97 (259)
T 3edm_A 79 AAADKFGEIHGLVHVAGGL 97 (259)
T ss_dssp HHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHCCCCEEEECCCCC
T ss_conf 9999809999999899877
No 85
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein structure initiative, structural genomics; 1.97A {Lactobacillus brevis atcc 367}
Probab=63.06 E-value=8.7 Score=18.66 Aligned_cols=82 Identities=20% Similarity=0.350 Sum_probs=56.9
Q ss_pred CCCEEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 8874999958816989---9999999999809982654530103879999889876535982999972676685113465
Q gi|254780157|r 3 IAPPVAIIMGSQSDWK---IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA 79 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~---~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~ 79 (165)
-+..|++++..-+|.- +.+.+...+++.| |.+-++.+...+++..++++.+..++++.+|...... +..+..
T Consensus 6 ~S~~Igvivp~~~~~f~~~~i~gi~~~~~~~g--y~~~i~~~~~~~~~~~~~i~~l~~~~vdgiIl~~~~~---~~~~~~ 80 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRG--YIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN---PQTVQE 80 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTT--CEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC---HHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC---HHHHHH
T ss_conf 89999999399989899999999999999869--9999994899989999999999966998999953689---699999
Q ss_pred H--CCCCEEEEC
Q ss_conf 2--242036612
Q gi|254780157|r 80 M--TSLPVLGVP 89 (165)
Q Consensus 80 ~--t~~PVIgVP 89 (165)
. ...|||-+-
T Consensus 81 ~~~~~iPvV~~~ 92 (276)
T 3jy6_A 81 ILHQQMPVVSVD 92 (276)
T ss_dssp HHTTSSCEEEES
T ss_pred HHHCCCCEEEEC
T ss_conf 997499999976
No 86
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=62.82 E-value=8.8 Score=18.63 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=37.0
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 9988749999588169899999999999809982654530103879999889876535982999972
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGA 67 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A 67 (165)
|+|+|||.|+= .|..+.+-....|+.+|.. +. .| .++.+..++++. ..++++|.=-
T Consensus 1 M~mk~rILIVD---Dd~~~~~~l~~~L~~~g~~--v~--~a-~~~~eal~~l~~---~~pdlillD~ 56 (137)
T 3cfy_A 1 MSLRPRVLLVE---DSTSLAILYKQYVKDEPYD--IF--HV-ETGRDAIQFIER---SKPQLIILDL 56 (137)
T ss_dssp --CCCEEEEEC---SCTTHHHHHHHHTTTSSSE--EE--EE-SSHHHHHHHHHH---HCCSEEEECS
T ss_pred CCCCCEEEEEE---CCHHHHHHHHHHHHHCCCE--EE--EE-CCHHHHHHHHHH---CCCCEEEEEC
T ss_conf 99997699997---9999999999999987999--99--98-999999999984---7999999838
No 87
>1um0_A Chorismate synthase; beta-alpha-beta sandwich fold, lyase; HET: FMN; 1.95A {Helicobacter pylori} SCOP: d.258.1.1 PDB: 1umf_A
Probab=62.72 E-value=4.1 Score=20.78 Aligned_cols=93 Identities=20% Similarity=0.220 Sum_probs=52.3
Q ss_pred HHHHHHHHCCCCEEEEEEEHHC-----------------C-----HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 9999999809982654530103-----------------8-----79999889876535982999972676685113465
Q gi|254780157|r 22 YAADMLDTLGIDYEARIISAHR-----------------T-----PDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA 79 (165)
Q Consensus 22 ~a~~~L~~~gI~~~~~V~SAHR-----------------~-----p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~ 79 (165)
-|.+.|+++||....+|.+... . .+++.+.++++..++. .+.|++-.
T Consensus 138 iAk~~L~~~gI~i~s~v~~IG~i~~~~~~~~~~~~~~~~~~d~~~~~~m~~~I~~ak~~gD-----------SlGG~ve~ 206 (365)
T 1um0_A 138 FAKMLLREIGIVCESGIIEIGGIKAKNYDFNHALKSEIFALDEEQEEAQKTAIQNAIKNHD-----------SIGGVALI 206 (365)
T ss_dssp HHHHHHHHTTEEEEEEEEEETTEECSSCCHHHHHHSTTCBSCHHHHHHHHHHHHHHHHTTC-----------CBCEEEEE
T ss_pred HHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC-----------CCCCEEEE
T ss_conf 9999999728716999982341025663345554155447897899999999999996389-----------88987999
Q ss_pred HC--CCCEEEECCCCCC--CCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHH
Q ss_conf 22--4203661257766--6750016998403569862044316753122899
Q gi|254780157|r 80 MT--SLPVLGVPIISQT--LGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASL 128 (165)
Q Consensus 80 ~t--~~PVIgVP~~~~~--~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal 128 (165)
.. ..+++|+|+-.+. ++.+|+.|+-.-| ++| ++-+|-++.||.++-
T Consensus 207 ~a~gv~~~~g~P~GlG~p~f~kLda~La~a~m--SIp-AvKgVE~G~Gf~~a~ 256 (365)
T 1um0_A 207 RARSIKTNQKLPIGLGQGLYAKLDAKIAEAMM--GLN-GVKAVEIGKGVESSL 256 (365)
T ss_dssp EEEESSTTCCCCSCCSBTTTBCHHHHHHHHHH--TST-TEEEEEETTGGGGGG
T ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH--CCC-HHEEEEECCHHHHHH
T ss_conf 99975236778978788876767899999984--321-012566432266774
No 88
>3imf_A Short chain dehydrogenase; structural genomics, infectious diseases, center for structural genomics of infectious diseases, oxidoreductase; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=61.96 E-value=9.1 Score=18.53 Aligned_cols=66 Identities=20% Similarity=0.222 Sum_probs=34.4
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCC------------------------CCEEEEEEEHHCCHHHHHHHHHHHHH
Q ss_conf 988749999588169899999999999809------------------------98265453010387999988987653
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLG------------------------IDYEARIISAHRTPDRLIEFAKNARF 57 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~g------------------------I~~~~~V~SAHR~p~~l~~~~~~~~~ 57 (165)
+++-||++|.|+.+- +...++..|.+-| .++....+- -..++.+.+++++..+
T Consensus 3 sLk~KvalITGas~G--IG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~D-v~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 3 AMKEKVVIITGGSSG--MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD-VRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TTTTCEEEETTTTSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECC-TTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEC-CCCHHHHHHHHHHHHH
T ss_conf 758498999389878--9999999999879989999798899999999998569948999930-8999999999999999
Q ss_pred --CCCEEEEEEECCC
Q ss_conf --5982999972676
Q gi|254780157|r 58 --EGFKLIIAGAGGA 70 (165)
Q Consensus 58 --~~~~viIa~AG~a 70 (165)
..++++|..||..
T Consensus 80 ~~G~iDilVnnAG~~ 94 (257)
T 3imf_A 80 KFGRIDILINNAAGN 94 (257)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HHCCCCEEEECCCCC
T ss_conf 839997999899788
No 89
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=61.75 E-value=9.2 Score=18.51 Aligned_cols=62 Identities=29% Similarity=0.307 Sum_probs=32.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCC------------------------CEEEEEEEHHCCHHHHHHHHHHHHH--CC
Q ss_conf 499995881698999999999998099------------------------8265453010387999988987653--59
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGI------------------------DYEARIISAHRTPDRLIEFAKNARF--EG 59 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI------------------------~~~~~V~SAHR~p~~l~~~~~~~~~--~~ 59 (165)
||++|.|+.+- +...+++.|-+-|. .+....+ =.+.++.+.++.+...+ ..
T Consensus 3 KvalVTGas~G--IG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~-Dvt~~~~v~~~~~~~~~~~G~ 79 (256)
T 1geg_A 3 KVALVTGAGQG--IGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKV-DVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CEEEEETTTSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTTSHHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE-CCCCHHHHHHHHHHHHHHCCC
T ss_conf 89999166558--999999999987998999979899999999999963992999994-289999999999999997599
Q ss_pred CEEEEEEECCC
Q ss_conf 82999972676
Q gi|254780157|r 60 FKLIIAGAGGA 70 (165)
Q Consensus 60 ~~viIa~AG~a 70 (165)
++++|-.||..
T Consensus 80 iDiLVnnAG~~ 90 (256)
T 1geg_A 80 FDVIVNNAGVA 90 (256)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
T ss_conf 97999899889
No 90
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=61.68 E-value=4.1 Score=20.75 Aligned_cols=79 Identities=11% Similarity=0.068 Sum_probs=60.0
Q ss_pred CCCCHHHHHHHHHHHHHC----------CCCEEEEEEEHHCCHHHHHHHHHH----HHHCCCEEEEEEECCCCCCHHHHH
Q ss_conf 816989999999999980----------998265453010387999988987----653598299997267668511346
Q gi|254780157|r 13 SQSDWKIMKYAADMLDTL----------GIDYEARIISAHRTPDRLIEFAKN----ARFEGFKLIIAGAGGAAHLPGMIA 78 (165)
Q Consensus 13 S~SD~~~~~~a~~~L~~~----------gI~~~~~V~SAHR~p~~l~~~~~~----~~~~~~~viIa~AG~aaaLpgvva 78 (165)
+.||+..++...+.|+++ ||.|- .+.+.-++|+.+.+..+. +...+++++++.+-+.=.++..+|
T Consensus 4 ~~~~~~~~~~~~~~l~~~i~~~~dfP~~Gi~f~-Di~~il~dP~~~~~v~~~la~~~~~~~~D~Iv~~e~~Gi~la~~lA 82 (190)
T 2dy0_A 4 GSSGMTATAQQLEYLKNSIKSIQDYPKPGILFR-DVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVA 82 (190)
T ss_dssp -----CCCHHHHHHHHHHSEEETTCSSTTCCEE-ETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEE-ECCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
T ss_conf 844344368999999985787599999995799-6982766999999999999998406899999973534312068999
Q ss_pred HHCCCCEEEECCCC
Q ss_conf 52242036612577
Q gi|254780157|r 79 AMTSLPVLGVPIIS 92 (165)
Q Consensus 79 ~~t~~PVIgVP~~~ 92 (165)
-.+..|.+-+=-.+
T Consensus 83 ~~l~~p~v~~RK~~ 96 (190)
T 2dy0_A 83 LGLGVGFVPVRKPG 96 (190)
T ss_dssp HHHTCEEEEEBSTT
T ss_pred HHCCCCEEEEEECC
T ss_conf 97599869875579
No 91
>1xmx_A Hypothetical protein VC1899; alpha-beta, MCSG, protein structure initiative, structural genomics, PSI, midwest center for structural genomics; 2.10A {Vibrio cholerae} SCOP: c.52.1.26
Probab=61.43 E-value=9.3 Score=18.47 Aligned_cols=91 Identities=16% Similarity=0.160 Sum_probs=63.5
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHH----HHHHHHHCCCEEEEEEECCCCCCHHH--
Q ss_conf 887499995881698999999999998099826545301038799998----89876535982999972676685113--
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIE----FAKNARFEGFKLIIAGAGGAAHLPGM-- 76 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~----~~~~~~~~~~~viIa~AG~aaaLpgv-- 76 (165)
..|+=+|+.+|.+..+.++....+|++.+++++...++--=.+.++.+ +.+....++.++++=.-|+.-+.+=.
T Consensus 26 ~~~~~vv~i~s~~~~~~~e~L~~~l~~~~i~~e~~~i~~~~d~~~i~~~i~~~~~~l~~~~~~v~lN~TGGTK~Mslaay 105 (385)
T 1xmx_A 26 TVSRHIIFIGDHTQTVIYQRLSDVLNKRNISTDFFEIPAGSNTSAIKSAIRELAETLKARGEEVKFNASCGLRHRLLSAY 105 (385)
T ss_dssp CCCCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHHHHHHHHHTCEEEEECSSSCHHHHHHHH
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
T ss_conf 98776999978007999999999997279860698358756889999999999986223488089984787278899999
Q ss_pred -HHHHCCCCEEEECCCCC
Q ss_conf -46522420366125776
Q gi|254780157|r 77 -IAAMTSLPVLGVPIISQ 93 (165)
Q Consensus 77 -va~~t~~PVIgVP~~~~ 93 (165)
+.-....|.+=+.+.+.
T Consensus 106 ~~~r~~~~~~~Yvd~~~~ 123 (385)
T 1xmx_A 106 EVFRSYHWPIFVVEPNSD 123 (385)
T ss_dssp HHHHHTTCCEEEECTTTC
T ss_pred HHHHHCCCCEEEEECCCC
T ss_conf 999863997799975996
No 92
>1q1l_A Chorismate synthase; beta alpha beta sandwich, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.05A {Aquifex aeolicus} SCOP: d.258.1.1
Probab=60.32 E-value=9.7 Score=18.35 Aligned_cols=88 Identities=16% Similarity=0.234 Sum_probs=46.5
Q ss_pred HHHHHHHHCCCCEEEEEEEHH-------------CCH-----------------------HHHHHHHHHHHHCCCEEEEE
Q ss_conf 999999980998265453010-------------387-----------------------99998898765359829999
Q gi|254780157|r 22 YAADMLDTLGIDYEARIISAH-------------RTP-----------------------DRLIEFAKNARFEGFKLIIA 65 (165)
Q Consensus 22 ~a~~~L~~~gI~~~~~V~SAH-------------R~p-----------------------~~l~~~~~~~~~~~~~viIa 65 (165)
-|...|+++||...-+|.+.. -++ +++.++++++..++.
T Consensus 151 iAk~~L~~~gI~v~s~v~~IG~i~~~~~~~~~~~~~~~~~~~~~~~~~~s~~rc~d~~~~~~m~~~I~~ar~~gD----- 225 (401)
T 1q1l_A 151 VCKKFLSEFGIKIGSFVVSIGQKEVEELKDKSYFANPEKLLSYHEKAEDSELRIPFPEKDEEFKTYIDEVKEKGE----- 225 (401)
T ss_dssp HHHHHHHTTTCEEEEEEEEETTEECGGGSSGGGGGCHHHHHHHHHHHTTSTTCCSCGGGHHHHHHHHHHHHTTTC-----
T ss_pred HHHHHHHHCCEEEEEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC-----
T ss_conf 999999874939999999978686243465534468145455566665087368997999999999999986699-----
Q ss_pred EECCCCCCHHHHHHHCCCCEEEECCCCCC---C-CCCCCHHHHHHCCCCCCCEEEECCCCCCHHHH
Q ss_conf 72676685113465224203661257766---6-75001699840356986204431675312289
Q gi|254780157|r 66 GAGGAAHLPGMIAAMTSLPVLGVPIISQT---L-GGIDSLLSIVQMPAGVPVGTMAIGQSGAINAS 127 (165)
Q Consensus 66 ~AG~aaaLpgvva~~t~~PVIgVP~~~~~---~-~G~dallS~vqMP~Gvpvatv~vg~~~~~NAa 127 (165)
.+. +....=+-|||+--|. | +.+|+.|+-.-| ++| |+-+|-.+.||+++
T Consensus 226 ------SlG----G~ve~~~~gvP~GLG~pv~~d~kLda~LA~alm--SIp-AvKgVEfG~Gf~~a 278 (401)
T 1q1l_A 226 ------SLG----GVFEVFALNVPPGLGSHIQWDRRIDGRIAQAMM--SIQ-AIKGVEIGLGFEAA 278 (401)
T ss_dssp ------CBC----EEEEEEEESCCTTCSCSSSGGGCHHHHHHHHHH--TST-TEEEEEETTGGGGG
T ss_pred ------CCC----EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH--CCC-CCEEEEECCCHHHH
T ss_conf ------973----799999975898870896753420299999872--650-13034204543244
No 93
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=60.31 E-value=8.7 Score=18.67 Aligned_cols=44 Identities=14% Similarity=0.264 Sum_probs=29.7
Q ss_pred CCCCCEEEEEECC-CCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCH
Q ss_conf 9988749999588-16989999999999980998265453010387
Q gi|254780157|r 1 MNIAPPVAIIMGS-QSDWKIMKYAADMLDTLGIDYEARIISAHRTP 45 (165)
Q Consensus 1 m~~~pkV~Ii~GS-~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p 45 (165)
|+|+-||+|+.-- -++++++ ...+.|...+-.|+++++|....|
T Consensus 1 ~~~~~rIaill~~gf~~le~~-~~~evl~~~~~~~~v~~vs~~~~~ 45 (211)
T 3mgk_A 1 MSLSYRIDVLLFNKFETLDVF-GPVEIFGNLQDDFELNFISSDGGL 45 (211)
T ss_dssp ---CEEEEEECCTTCCHHHHH-HHHHHHTTCTTTEEEEEECSSCEE
T ss_pred CCCCEEEEEEECCCCHHHHHH-HHHHHHHCCCCCCEEEEEECCCCE
T ss_conf 998659999984988099999-999999809999679999778974
No 94
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=60.14 E-value=9.8 Score=18.33 Aligned_cols=61 Identities=21% Similarity=0.277 Sum_probs=35.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH---------------------------CCHHHHHHHHHHHHH-
Q ss_conf 4999958816989999999999980998265453010---------------------------387999988987653-
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAH---------------------------RTPDRLIEFAKNARF- 57 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAH---------------------------R~p~~l~~~~~~~~~- 57 (165)
||++|.|+.| -+...+++.|-+-|.. +-+.+-. ..++.+.++.++..+
T Consensus 3 KvalVTGas~--GIG~aiA~~la~~Ga~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 3 KVAMVTGGAQ--GIGRGISEKLAADGFD--IAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHHTCE--EEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHHCCCE--EEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 8999907886--8999999999987998--99995898878999999999856994899990279999999999999998
Q ss_pred -CCCEEEEEEECCC
Q ss_conf -5982999972676
Q gi|254780157|r 58 -EGFKLIIAGAGGA 70 (165)
Q Consensus 58 -~~~~viIa~AG~a 70 (165)
..++++|..||..
T Consensus 79 ~G~iDiLVnnAG~~ 92 (258)
T 3a28_C 79 LGGFDVLVNNAGIA 92 (258)
T ss_dssp HTCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
T ss_conf 29983999899889
No 95
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics consortium, SGC, cytoplasm, developmental protein; 2.21A {Homo sapiens}
Probab=59.79 E-value=9.9 Score=18.29 Aligned_cols=74 Identities=16% Similarity=0.234 Sum_probs=47.3
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCC
Q ss_conf 74999958816989999999999980998265453010387999988987653598299997267668511346522420
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLP 84 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~P 84 (165)
.+|.|.+ .+.=|+..++...|+.+||+|+..-...+-...++.+..+.. .+..+.|
T Consensus 17 ~~Vviys--k~~Cp~C~~ak~lL~~~~i~~~~veid~~~d~~~~~~~l~~~----------------------~g~~tvP 72 (114)
T 3h8q_A 17 SRVVIFS--KSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEI----------------------TNQKTVP 72 (114)
T ss_dssp CSEEEEE--CTTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHH----------------------HSCCSSC
T ss_pred CCEEEEE--CCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH----------------------CCCCCCC
T ss_conf 9789998--998867999999999749983464201246530355899985----------------------4998799
Q ss_pred EEEECCCCCCCCCCCCHHHH
Q ss_conf 36612577666750016998
Q gi|254780157|r 85 VLGVPIISQTLGGIDSLLSI 104 (165)
Q Consensus 85 VIgVP~~~~~~~G~dallS~ 104 (165)
.|=+ .+...+|.|-+..+
T Consensus 73 qifi--~g~~IGG~~el~~l 90 (114)
T 3h8q_A 73 NIFV--NKVHVGGCDQTFQA 90 (114)
T ss_dssp EEEE--TTEEEESHHHHHHH
T ss_pred EEEE--CCEEEECHHHHHHH
T ss_conf 8999--99898178999999
No 96
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI- II, NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis nctc 9343}
Probab=59.52 E-value=9.4 Score=18.43 Aligned_cols=53 Identities=23% Similarity=0.289 Sum_probs=34.5
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC-CEEEEEE---EHHCCHHHHHHHHH
Q ss_conf 99887499995881698999999999998099-8265453---01038799998898
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGI-DYEARII---SAHRTPDRLIEFAK 53 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI-~~~~~V~---SAHR~p~~l~~~~~ 53 (165)
|+|.|+|.|++-........+++.+.+..... ++|+-|. |-..+.+...++.+
T Consensus 1 ~~~~p~isIiIptyN~~~~l~~~l~Si~~q~~~~~eiIIvDd~S~d~t~~~~~~~~~ 57 (240)
T 3bcv_A 1 MSLIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAA 57 (240)
T ss_dssp --CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHH
T ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHCC
T ss_conf 998990699997378889999999999808798859999989798664300012023
No 97
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=59.34 E-value=6 Score=19.69 Aligned_cols=86 Identities=15% Similarity=0.252 Sum_probs=53.1
Q ss_pred CEEEEEECCCCCHHHHHHHHHHH-----HHCC------CC-----------E---EEE-------------EEEHHCCHH
Q ss_conf 74999958816989999999999-----9809------98-----------2---654-------------530103879
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADML-----DTLG------ID-----------Y---EAR-------------IISAHRTPD 46 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L-----~~~g------I~-----------~---~~~-------------V~SAHR~p~ 46 (165)
-||+|+.++ -|-|-|+.+...+ +.++ +. . ++. ++.--|+++
T Consensus 98 ~rIgIltsG-GdaPGmNavIr~vv~~a~~~~~~~~V~Gi~~G~~GLi~~~~~~~~~L~~~~v~~i~~~GGtiLGTsR~~e 176 (487)
T 2hig_A 98 TTIGIVTCG-GICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGSSRGPQ 176 (487)
T ss_dssp CEEEEEECS-SCCTTHHHHHHHHHHHHHHHHCCSEEEECSTGGGGGSHHHHTTCEEECHHHHTTGGGSSSCSSCCCCSCC
T ss_pred CEEEEECCC-CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCC
T ss_conf 589998857-8847689999999999999659938999841148860599754101899998408856970612589985
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH--H-----HCCCCEEEECCCC
Q ss_conf 99988987653598299997267668511346--5-----2242036612577
Q gi|254780157|r 47 RLIEFAKNARFEGFKLIIAGAGGAAHLPGMIA--A-----MTSLPVLGVPIIS 92 (165)
Q Consensus 47 ~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva--~-----~t~~PVIgVP~~~ 92 (165)
...+.+++.+..+++.+|++-|-.. +-++.. - ....||||+|-.-
T Consensus 177 ~~~~i~~~L~~~~Id~LivIGGdgS-~~~A~~Lae~~~~~~~~i~VIGIPKTI 228 (487)
T 2hig_A 177 DPKEMVDTLERLGVNILFTVGGDGT-QRGALVISQEAKRRGVDISVFGVPKTI 228 (487)
T ss_dssp CHHHHHHHHHHHTCSEEEEEECHHH-HHHHHHHHHHHHHHTCCCEEEEEECCT
T ss_pred CHHHHHHHHHHHCCCEEEEECCHHH-HHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 6999999999849987999567478-999999999988628983299840255
No 98
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1G07440, reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=59.33 E-value=10 Score=18.24 Aligned_cols=54 Identities=17% Similarity=0.248 Sum_probs=33.3
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCE
Q ss_conf 988749999588169899999999999809982654530103879999889876535982
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFK 61 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~ 61 (165)
+++-||++|.|+.+- +...+++.|-+.|.. |.-.-|+.+++.+..++.+..+.+
T Consensus 11 ~L~gK~alITGas~G--IG~aiA~~la~~Ga~----V~~~~r~~~~~~~~~~~~~~~~~~ 64 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKG--IGHAIVEEFAGFGAV----IHTCARNEYELNECLSKWQKKGFQ 64 (266)
T ss_dssp CCTTCEEEETTTTSH--HHHHHHHHHHHTTCE----EEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCEEEEECCCCH--HHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHHHHCCCE
T ss_conf 899998999279868--999999999987999----999979999999999998732980
No 99
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative reductase, PSI; 1.28A {Pseudomonas aeruginosa PAO1} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=59.16 E-value=10 Score=18.22 Aligned_cols=150 Identities=13% Similarity=0.080 Sum_probs=81.0
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHC-CCCEEEEEEEHH------------CCHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 998874999958816989999999999980-998265453010------------3879999889876535982999972
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTL-GIDYEARIISAH------------RTPDRLIEFAKNARFEGFKLIIAGA 67 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~-gI~~~~~V~SAH------------R~p~~l~~~~~~~~~~~~~viIa~A 67 (165)
|..+-||.+|.||.+.-..-....+.+.+. .=.+++.+.... ..|+.+.++.+..+ ..+.||-+.
T Consensus 3 m~~~MKIl~I~GS~R~~S~t~~l~~~~~~~~~~g~ev~~idl~~lPl~~~d~~~~~~p~~~~~~~~~i~--~AD~~Ii~s 80 (193)
T 1rtt_A 3 LSDDIKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISGIPLYNEDVYALGFPPAVERFREQIR--AADALLFAT 80 (193)
T ss_dssp ----CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHH--HCSEEEEEC
T ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHH--CCCEEEEEC
T ss_conf 889977999989899888899999999986469998999876778987766334589899999999986--389589961
Q ss_pred -----CCCCCCHHHHH--------HHCCCCEEEECCCCCCCCCCCCHH------HHHHCCCCCCCEEEECCCC-CCHHHH
Q ss_conf -----67668511346--------522420366125776667500169------9840356986204431675-312289
Q gi|254780157|r 68 -----GGAAHLPGMIA--------AMTSLPVLGVPIISQTLGGIDSLL------SIVQMPAGVPVGTMAIGQS-GAINAS 127 (165)
Q Consensus 68 -----G~aaaLpgvva--------~~t~~PVIgVP~~~~~~~G~dall------S~vqMP~Gvpvatv~vg~~-~~~NAa 127 (165)
+..+.|-..+. .+..+||.-+-+++|...|..++. +.++|. .+|-..+.++.. ..++.-
T Consensus 81 PeY~~s~pg~LKn~iD~~~~~~~~~~~~Kp~~~i~~sgG~~~g~~~~~~Lr~~l~~~g~~-~v~~~~~~v~~~~~~fd~~ 159 (193)
T 1rtt_A 81 PEYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAGRFGTARAQYHLRQTLVFLDVH-PLNKPEVMISSAQNAFDAQ 159 (193)
T ss_dssp CEETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSSTTTTHHHHHHHHHHHHHHTCE-ECCSSCEEECSGGGTBCST
T ss_pred HHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCE-ECCCCEEEEECHHHCCCCC
T ss_conf 788633259999999986437873138986999998887056799999999999986947-7378889986668628988
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999970699999999999999999999840
Q gi|254780157|r 128 LLAVAILALDDKELTDRLNEWRTQQTISISEY 159 (165)
Q Consensus 128 l~A~~Il~~~d~~i~~kl~~~r~~~~~~v~~~ 159 (165)
. .+.|++.+++|+++-+++..-+.+.
T Consensus 160 ---g---~~~de~~~~~l~~~~~~l~~~~~~~ 185 (193)
T 1rtt_A 160 ---G---RLLDDKARELIQQQLQALQLWVREG 185 (193)
T ss_dssp ---T---CBCCHHHHHHHHHHHHHHHC-----
T ss_pred ---C---CCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf ---8---8889999999999999999999963
No 100
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, cytoplasm, transport, glutathione, thioredoxin fold; HET: GSW; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=58.70 E-value=10 Score=18.17 Aligned_cols=74 Identities=19% Similarity=0.266 Sum_probs=46.8
Q ss_pred CEEEEEECCCCC---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHC
Q ss_conf 749999588169---89999999999980998265453010387999988987653598299997267668511346522
Q gi|254780157|r 5 PPVAIIMGSQSD---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMT 81 (165)
Q Consensus 5 pkV~Ii~GS~SD---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t 81 (165)
.+|+|+|=|+-+ -|+..++...|+.+||+|+..-... .|+ +.++++.. .+..
T Consensus 35 ~~VvvFsKgt~~~P~CpyC~~ak~lL~~~gi~y~~idv~~--d~~-~~~~l~~~----------------------tg~~ 89 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ--NPD-IRAELPKY----------------------ANWP 89 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG--CHH-HHHHHHHH----------------------HTCC
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCC--CHH-HHHHHHHH----------------------CCCC
T ss_conf 9889997889989888479999999987499859996537--799-99999996----------------------4999
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHH
Q ss_conf 420366125776667500169984
Q gi|254780157|r 82 SLPVLGVPIISQTLGGIDSLLSIV 105 (165)
Q Consensus 82 ~~PVIgVP~~~~~~~G~dallS~v 105 (165)
+.|-|= +.+...+|.|-|..+.
T Consensus 90 TvPqVF--I~G~~IGG~ddl~~l~ 111 (135)
T 2wci_A 90 TFPQLW--VDGELVGGCDIVIEMY 111 (135)
T ss_dssp SSCEEE--ETTEEEESHHHHHHHH
T ss_pred CCCEEE--ECCEEECCHHHHHHHH
T ss_conf 889797--8999986889999999
No 101
>3brs_A Periplasmic binding protein/LACI transcriptional regulator; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans isdg}
Probab=58.64 E-value=10 Score=18.16 Aligned_cols=132 Identities=12% Similarity=-0.004 Sum_probs=75.8
Q ss_pred CEEEEEEC--CCCC---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 74999958--8169---899999999999809982654530103879999889876535982999972676685113465
Q gi|254780157|r 5 PPVAIIMG--SQSD---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA 79 (165)
Q Consensus 5 pkV~Ii~G--S~SD---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~ 79 (165)
.+++.|.- .+|+ ..+.+.+.+..+++|+++.+......-.+++-.+.++++..++++.||...--...+...+.-
T Consensus 6 ~~i~~i~~~~d~s~~f~~~v~~G~~~aa~~~g~~~~~~~~~~~~d~~~q~~~i~~li~~~~dgIii~~~~~~~~~~~l~~ 85 (289)
T 3brs_A 6 YYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKE 85 (289)
T ss_dssp CEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTT
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
T ss_conf 49999984699998799999999999999829989999689988999999999999976999999968841536999999
Q ss_pred HCC--CCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC---------------CCHHHH
Q ss_conf 224--203661257766675001699840356986204431675312289999999706---------------999999
Q gi|254780157|r 80 MTS--LPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL---------------DDKELT 142 (165)
Q Consensus 80 ~t~--~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~---------------~d~~i~ 142 (165)
... .|||-+-.... .+.+...+ +.+ .+.++..+++.|.- .+....
T Consensus 86 a~~~gIpvv~~d~~~~---------------~~~~~~~V--~~d-~~~~g~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~ 147 (289)
T 3brs_A 86 IKDAGIKLIVIDSGMK---------------QDIADITV--ATD-NIQAGIRIGAVTKNLVRKSGKIGVISFVKNSKTAM 147 (289)
T ss_dssp TGGGTCEEEEESSCCS---------------SCCCSEEE--ECC-HHHHHHHHHHHHHHHTSSSCEEEEEESCTTSHHHH
T ss_pred HHHCCCCEEEEECCCC---------------CCCCCEEE--EEC-CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH
T ss_conf 9975998799951456---------------66764599--966-18999999999986337997699995777884098
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780157|r 143 DRLNEWRTQQTI 154 (165)
Q Consensus 143 ~kl~~~r~~~~~ 154 (165)
+|...|++.+.+
T Consensus 148 ~R~~g~~~~l~~ 159 (289)
T 3brs_A 148 DREEGLKIGLSD 159 (289)
T ss_dssp HHHHHHHHHHGG
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999986
No 102
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structural genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=58.62 E-value=10 Score=18.16 Aligned_cols=28 Identities=21% Similarity=0.214 Sum_probs=16.8
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 887499995881698999999999998099
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGI 32 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI 32 (165)
++-||++|.|+.+ -+...+++.|-+.|.
T Consensus 3 L~GKv~lITG~s~--GIG~aia~~la~~Ga 30 (260)
T 2qq5_A 3 MNGQVCVVTGASR--GIGRGIALQLCKAGA 30 (260)
T ss_dssp TTTCEEEESSTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
T ss_conf 9998899958586--999999999998799
No 103
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=58.13 E-value=11 Score=18.11 Aligned_cols=51 Identities=18% Similarity=0.212 Sum_probs=42.5
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHH
Q ss_conf 887499995881698999999999998099826545301038799998898765
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNAR 56 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~ 56 (165)
|++|-..|.|||- .+...+.+.++++. .|++...|+||+.+.+.+.++++.
T Consensus 1 M~kK~I~IlGSTG--SIG~~tL~Vi~~~~-~f~v~~Lsa~~N~~~L~~q~~~f~ 51 (376)
T 3a06_A 1 MEERTLVILGATG--SIGTQTLDVLKKVK-GIRLIGISFHSNLELAFKIVKEFN 51 (376)
T ss_dssp --CEEEEEETTTS--HHHHHHHHHHHHSC-SEEEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCH--HHHHHHHHHHHCCC-CCEEEEEECCCCHHHHHHHHHHCC
T ss_conf 9847899988770--99999999982289-965999977988999999999829
No 104
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GTT; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=58.10 E-value=11 Score=18.11 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=48.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCE
Q ss_conf 49999588169899999999999809982654530103879999889876535982999972676685113465224203
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPV 85 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PV 85 (165)
+|.|. |.+.=|+..++...|+..|++|+..-+.-+.....+.+..... .+..+.|.
T Consensus 21 ~Vviy--sk~~Cp~C~~ak~lL~~~gv~~~~v~ld~~~~~~~~~~~l~~~----------------------~g~~tvPq 76 (116)
T 2e7p_A 21 PVVVF--SKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHW----------------------TGRGTVPN 76 (116)
T ss_dssp SEEEE--ECTTCHHHHHHHHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHH----------------------HSCCSSCE
T ss_pred CEEEE--ECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH----------------------CCCCCCCE
T ss_conf 88999--8898847999999999659985389870544115788999871----------------------69988985
Q ss_pred EEECCCCCCCCCCCCHHHHHH
Q ss_conf 661257766675001699840
Q gi|254780157|r 86 LGVPIISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 86 IgVP~~~~~~~G~dallS~vq 106 (165)
|= +.+...+|.|-|..+.+
T Consensus 77 If--i~g~~IGG~del~~l~~ 95 (116)
T 2e7p_A 77 VF--IGGKQIGGCDTVVEKHQ 95 (116)
T ss_dssp EE--ETTEEEECHHHHHHHHH
T ss_pred EE--ECCEEECCHHHHHHHHH
T ss_conf 88--99989717899999998
No 105
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesis, isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=57.90 E-value=8.7 Score=18.65 Aligned_cols=86 Identities=19% Similarity=0.182 Sum_probs=54.9
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH-----CCHHHHHHHH----HHHHH-CCCE-EEEEEECC
Q ss_conf 998874999958816989999999999980998265453010-----3879999889----87653-5982-99997267
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAH-----RTPDRLIEFA----KNARF-EGFK-LIIAGAGG 69 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAH-----R~p~~l~~~~----~~~~~-~~~~-viIa~AG~ 69 (165)
|..+| ++|+=-+---+.+.++..+.|-.. ++.+.-.++| |+.+++.++. +...+ .+++ ++|||--.
T Consensus 1 m~~~p-IgvfDSGvGGltvl~~l~~~lP~~--~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~l~~~~~~~~IVIACNTa 77 (272)
T 1zuw_A 1 MLEQP-IGVIDSGVGGLTVAKEIMRQLPKE--NIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTA 77 (272)
T ss_dssp CTTSC-EEEEESSSTTHHHHHHHHHHSTTC--CEEEEECGGGCCCSSSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHH
T ss_pred CCCCC-EEEEECCCCHHHHHHHHHHHCCCC--CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHH
T ss_conf 99997-899988976799999999878999--889996688899899999999999999999999717998999766348
Q ss_pred CCCCHHHHHHHCCCCEEEEC
Q ss_conf 66851134652242036612
Q gi|254780157|r 70 AAHLPGMIAAMTSLPVLGVP 89 (165)
Q Consensus 70 aaaLpgvva~~t~~PVIgVP 89 (165)
++.---.+......||||+-
T Consensus 78 s~~al~~l~~~~~~piigvi 97 (272)
T 1zuw_A 78 TAIALDDIQRSVGIPVVGVI 97 (272)
T ss_dssp HHHHHHHHHHHCSSCEEESH
T ss_pred HHHHHHHHHHHCCCCEEECC
T ss_conf 89999999986398666224
No 106
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=57.03 E-value=11 Score=17.99 Aligned_cols=66 Identities=15% Similarity=0.128 Sum_probs=33.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCC------------------------CEEEEEEEHHCCHHHHHHHHHHHHH-
Q ss_conf 887499995881698999999999998099------------------------8265453010387999988987653-
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGI------------------------DYEARIISAHRTPDRLIEFAKNARF- 57 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI------------------------~~~~~V~SAHR~p~~l~~~~~~~~~- 57 (165)
++-||++|.|+.| -+...+++.|-+.|. ++....+ =...++.+.++.++..+
T Consensus 12 L~gKvalVTGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~-Dv~~~~~v~~~~~~~~~~ 88 (260)
T 2zat_A 12 LENKVALVTASTD--GIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVC-HVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp TTTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHH
T ss_conf 8999799927787--8999999999987999999979889999999998834983689976-579999999999999998
Q ss_pred -CCCEEEEEEECCCC
Q ss_conf -59829999726766
Q gi|254780157|r 58 -EGFKLIIAGAGGAA 71 (165)
Q Consensus 58 -~~~~viIa~AG~aa 71 (165)
..++++|..||...
T Consensus 89 ~G~iDiLVnnAG~~~ 103 (260)
T 2zat_A 89 HGGVDILVSNAAVNP 103 (260)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred HCCCCEEEECCCCCC
T ss_conf 099719998985556
No 107
>1ulu_A Enoyl-acyl carrier protein reductase; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.2.1.2 PDB: 2yw9_A*
Probab=56.97 E-value=11 Score=17.99 Aligned_cols=70 Identities=13% Similarity=0.166 Sum_probs=46.6
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE----------------------EEEHHCCHHHHHHHHHHHHH-
Q ss_conf 9988749999588169899999999999809982654----------------------53010387999988987653-
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR----------------------IISAHRTPDRLIEFAKNARF- 57 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~----------------------V~SAHR~p~~l~~~~~~~~~- 57 (165)
+|++-|+++|.|.+|..-+...+++.|-+.|...-+. +..--...+.+.++.+...+
T Consensus 4 ~~L~gK~~lITGasg~~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~v~~~~~~v~~~ 83 (261)
T 1ulu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 69999989997999986499999999998799999981746679999997620487245414669999999999999986
Q ss_pred -CCCEEEEEEECCC
Q ss_conf -5982999972676
Q gi|254780157|r 58 -EGFKLIIAGAGGA 70 (165)
Q Consensus 58 -~~~~viIa~AG~a 70 (165)
..++++|-.||..
T Consensus 84 ~g~iDilInnag~~ 97 (261)
T 1ulu_A 84 FGGLDYLVHAIAFA 97 (261)
T ss_dssp HSSEEEEEECCCCC
T ss_pred CCCCEEEEECCCCC
T ss_conf 59964999887334
No 108
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=56.82 E-value=11 Score=17.97 Aligned_cols=65 Identities=28% Similarity=0.381 Sum_probs=38.2
Q ss_pred HHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHH--------HHHHHCCCCEEEECCCC
Q ss_conf 9999980998265453010387999988987653598299997267668511--------34652242036612577
Q gi|254780157|r 24 ADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPG--------MIAAMTSLPVLGVPIIS 92 (165)
Q Consensus 24 ~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpg--------vva~~t~~PVIgVP~~~ 92 (165)
...++..|++++..+... .|. .++++.++..+++++|.++-..+.+.. -+.-++..||+=|+...
T Consensus 89 ~~~~~~~~v~~~~~~~~G--~~~--~~I~~~a~~~~~DlIVvG~~~~~~~~~~~~GS~s~~l~~~a~~PVlvVr~~~ 161 (162)
T 1mjh_A 89 KKELEDVGFKVKDIIVVG--IPH--EEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRKN 161 (162)
T ss_dssp HHHHHHTTCEEEEEEEEE--CHH--HHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEEEECCCC
T ss_pred HHHHHHCCCEEEEEEEEC--CHH--HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCC
T ss_conf 998876597699999936--789--9999873356589899847899865546107499999960899999984999
No 109
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=56.43 E-value=11 Score=17.93 Aligned_cols=77 Identities=18% Similarity=0.290 Sum_probs=48.8
Q ss_pred CCCEEEEEECCCCC---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 88749999588169---899999999999809982654530103879999889876535982999972676685113465
Q gi|254780157|r 3 IAPPVAIIMGSQSD---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA 79 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~ 79 (165)
.+.+|+|.|-++-| =|+..++...|+..|++|...=...| ++ +.++++.. .+
T Consensus 13 ~~~~VvvF~kgt~~~p~Cp~c~~ak~lL~~~gi~y~~~dv~~~--~e-~~~~l~~~----------------------s~ 67 (109)
T 1wik_A 13 NKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILED--EE-VRQGLKTF----------------------SN 67 (109)
T ss_dssp TTSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSC--HH-HHHHHHHH----------------------HS
T ss_pred HCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCC--HH-HHHHHHHH----------------------CC
T ss_conf 4397899957898899881699999999982998436424369--89-99999986----------------------69
Q ss_pred HCCCCEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 224203661257766675001699840
Q gi|254780157|r 80 MTSLPVLGVPIISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 80 ~t~~PVIgVP~~~~~~~G~dallS~vq 106 (165)
..+.|.|= +.+...+|.|-|..+.+
T Consensus 68 ~~TvPqIF--i~g~~IGG~d~l~~l~~ 92 (109)
T 1wik_A 68 WPTYPQLY--VRGDLVGGLDIVKELKD 92 (109)
T ss_dssp CCSSCEEE--CSSSEEECHHHHHHHHH
T ss_pred CCCCCEEE--ECCEEECCHHHHHHHHH
T ss_conf 99888487--86848658999999998
No 110
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=56.18 E-value=9 Score=18.57 Aligned_cols=83 Identities=18% Similarity=0.229 Sum_probs=49.7
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH-----CCHHHHHHH----HHHHHHCCCE-EEEEEECCCCCCHH
Q ss_conf 4999958816989999999999980998265453010-----387999988----9876535982-99997267668511
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAH-----RTPDRLIEF----AKNARFEGFK-LIIAGAGGAAHLPG 75 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAH-----R~p~~l~~~----~~~~~~~~~~-viIa~AG~aaaLpg 75 (165)
|++|+=-+---+.+.++..+.|-. .++.+.-.++| |+++++.++ ++..+..+++ ++|+|--.++.--.
T Consensus 2 kIgvfDSGiGGltv~~~l~~~~p~--~~~iy~~D~~~~PYG~ks~e~i~~~~~~~~~~L~~~~~~~IviaCNTa~a~~~~ 79 (254)
T 1b73_A 2 KIGIFDSGVGGLTVLKAIRNRYRK--VDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALE 79 (254)
T ss_dssp EEEEEESSSGGGTHHHHHHHHSTT--CEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHTTSHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
T ss_conf 799994898679999999997899--988999468889999899999999999999999976999999937857899999
Q ss_pred HHHHHCCCCEEEECC
Q ss_conf 346522420366125
Q gi|254780157|r 76 MIAAMTSLPVLGVPI 90 (165)
Q Consensus 76 vva~~t~~PVIgVP~ 90 (165)
.+......|+|++..
T Consensus 80 ~l~~~~~ipvi~ii~ 94 (254)
T 1b73_A 80 RLKKEINVPVFGVIE 94 (254)
T ss_dssp HHHHHSSSCEEESHH
T ss_pred HHHHHCCCCEEECCC
T ss_conf 999863798760562
No 111
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=55.48 E-value=6.5 Score=19.48 Aligned_cols=24 Identities=21% Similarity=0.390 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999984054067
Q gi|254780157|r 141 LTDRLNEWRTQQTISISEYPKDIP 164 (165)
Q Consensus 141 i~~kl~~~r~~~~~~v~~~~~~l~ 164 (165)
++++|+.||.+..+++.+..+++|
T Consensus 2 lrkrlrkfrnkikeklkkigqkiq 25 (32)
T 1lyp_A 2 LRKRLRKFRNKIKEKLKKIGQKIQ 25 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 787999999999999999989998
No 112
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=54.28 E-value=12 Score=17.71 Aligned_cols=68 Identities=16% Similarity=0.128 Sum_probs=36.4
Q ss_pred CCCCEEEEEECCCCC----------------------HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH--
Q ss_conf 988749999588169----------------------89999999999980998265453010387999988987653--
Q gi|254780157|r 2 NIAPPVAIIMGSQSD----------------------WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF-- 57 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD----------------------~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~-- 57 (165)
+++-||++|.|+.+- .+-.++....|+++|..+....+ =-+.++.+.++.++..+
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-Dv~~~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC-NVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEC-CTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE-CCCCHHHHHHHHHHHHHHC
T ss_conf 999998999486768999999999987999999979889999999999964993899980-1899999999999999974
Q ss_pred CCCEEEEEEECCC
Q ss_conf 5982999972676
Q gi|254780157|r 58 EGFKLIIAGAGGA 70 (165)
Q Consensus 58 ~~~~viIa~AG~a 70 (165)
..++++|..||..
T Consensus 88 g~iDiLVnnAG~~ 100 (256)
T 3gaf_A 88 GKITVLVNNAGGG 100 (256)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
T ss_conf 9998999899999
No 113
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3ij8_A* 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* ...
Probab=53.41 E-value=12 Score=17.72 Aligned_cols=55 Identities=7% Similarity=0.043 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEE--------------------------EEEEEHHCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 881698999999999998099826--------------------------545301038799998898765359829999
Q gi|254780157|r 12 GSQSDWKIMKYAADMLDTLGIDYE--------------------------ARIISAHRTPDRLIEFAKNARFEGFKLIIA 65 (165)
Q Consensus 12 GS~SD~~~~~~a~~~L~~~gI~~~--------------------------~~V~SAHR~p~~l~~~~~~~~~~~~~viIa 65 (165)
.+=+=..+++++...|+++|+.+. .+|.|-.-|++.+.++++.+..+|++||+=
T Consensus 17 f~w~~~~i~~~~~~yl~~lG~taIwi~P~~e~~~~~~~~~~~~~gY~~~dy~v~~r~Gt~~dfk~LV~~aH~~GI~VIlD 96 (496)
T 1hx0_A 17 FEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRDMVTRCNNVGVRIYVD 96 (496)
T ss_dssp TTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 30777999999999999719988993948047656889998640025657646899999999999999999879989984
Q ss_pred E
Q ss_conf 7
Q gi|254780157|r 66 G 66 (165)
Q Consensus 66 ~ 66 (165)
+
T Consensus 97 v 97 (496)
T 1hx0_A 97 A 97 (496)
T ss_dssp E
T ss_pred E
T ss_conf 6
No 114
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=53.35 E-value=13 Score=17.61 Aligned_cols=54 Identities=20% Similarity=0.267 Sum_probs=28.8
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCE
Q ss_conf 988749999588169899999999999809982654530103879999889876535982
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFK 61 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~ 61 (165)
+++-||++|.|+.|- +...+++.|-+.|.. |+-..|+.+++.+..+..+..+.+
T Consensus 18 ~L~GK~alITGas~G--IG~aiA~~la~~Ga~----V~~~~r~~~~l~~~~~~~~~~g~~ 71 (273)
T 1ae1_A 18 SLKGTTALVTGGSKG--IGYAIVEELAGLGAR----VYTCSRNEKELDECLEIWREKGLN 71 (273)
T ss_dssp CCTTCEEEEESCSSH--HHHHHHHHHHHTTCE----EEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCEEEEECCCCH--HHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHHHHCCCC
T ss_conf 799998999288869--999999999987999----999979989999999999832995
No 115
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=53.31 E-value=13 Score=17.61 Aligned_cols=84 Identities=12% Similarity=0.075 Sum_probs=59.9
Q ss_pred CCEEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 874999958816989---99999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSDWK---IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~---~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
+.|++++..+.+|-- +.+.+.+.++++|++.. ......+++..+.++.+..++++.+|-...-.......+.-.
T Consensus 2 ~~kIg~i~~~~~~p~~~~~~~g~~~~a~~~g~~~i---~~~~~d~~~~~~~i~~~i~~~vdgiIi~~~~~~~~~~~~~~a 78 (306)
T 8abp_A 2 NLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVI---KIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKA 78 (306)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEE---EEECCSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHH
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEE---EECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 74999996999888999999999999997399999---975999999999999999769998999468842249999999
Q ss_pred --CCCCEEEECC
Q ss_conf --2420366125
Q gi|254780157|r 81 --TSLPVLGVPI 90 (165)
Q Consensus 81 --t~~PVIgVP~ 90 (165)
...||+.+-.
T Consensus 79 ~~~giPvV~~d~ 90 (306)
T 8abp_A 79 RGYDMKVIAVDD 90 (306)
T ss_dssp HHTTCEEEEESS
T ss_pred HHCCCCEEEEEE
T ss_conf 975997899971
No 116
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=52.74 E-value=13 Score=17.55 Aligned_cols=64 Identities=23% Similarity=0.308 Sum_probs=39.5
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHH------------------------HHHHHHHH
Q ss_conf 998874999958816989999999999980998265453010387999------------------------98898765
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRL------------------------IEFAKNAR 56 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l------------------------~~~~~~~~ 56 (165)
|+.+-||++|.|+.| -+...+++.|-+-|... +-..|+.+++ .++.+...
T Consensus 5 m~L~gK~alITGas~--GIG~aia~~la~~Ga~V----v~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (248)
T 3op4_A 5 MNLEGKVALVTGASR--GIGKAIAELLAERGAKV----IGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAIT 78 (248)
T ss_dssp TCCTTCEEEESSCSS--HHHHHHHHHHHHTTCEE----EEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEE----EEEECCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
T ss_conf 189999899938787--89999999999869999----999798899999999857875799996899999999999999
Q ss_pred H--CCCEEEEEEECCC
Q ss_conf 3--5982999972676
Q gi|254780157|r 57 F--EGFKLIIAGAGGA 70 (165)
Q Consensus 57 ~--~~~~viIa~AG~a 70 (165)
+ ..++++|..||..
T Consensus 79 ~~~g~iD~LVnnAG~~ 94 (248)
T 3op4_A 79 DEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHCCCSEEEECCCCC
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9819985999899766
No 117
>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=51.33 E-value=14 Score=17.41 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=19.0
Q ss_pred CCEEEEE-EECCCC-CCHHHHHHHCCCCEEEEC
Q ss_conf 9829999-726766-851134652242036612
Q gi|254780157|r 59 GFKLIIA-GAGGAA-HLPGMIAAMTSLPVLGVP 89 (165)
Q Consensus 59 ~~~viIa-~AG~aa-aLpgvva~~t~~PVIgVP 89 (165)
+.++||. +.|++. .++-+.......+||-..
T Consensus 51 ~ADliv~~G~~lE~~~~~~~~~~~~~~~vi~~~ 83 (291)
T 1pq4_A 51 EAEAYVLIGLGFEQPWLEKLKAANANMKLIDSA 83 (291)
T ss_dssp GCSEEEECCTTTTTTTHHHHHHHCSSSEEEETT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 399999958626889999999725798753024
No 118
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=50.47 E-value=14 Score=17.32 Aligned_cols=67 Identities=10% Similarity=0.122 Sum_probs=34.0
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC---------------------------EEEEEEEHHCCHHHHHHHHH
Q ss_conf 998874999958816989999999999980998---------------------------26545301038799998898
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGID---------------------------YEARIISAHRTPDRLIEFAK 53 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~---------------------------~~~~V~SAHR~p~~l~~~~~ 53 (165)
+|++-||++|.|+.|. +...+++.|.+-|.. +....+ =-+.++.+.++.+
T Consensus 7 ~~L~gKvalITGas~G--IG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~-Dv~~~~~v~~~~~ 83 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKN--LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQS-DLSNEEEVAKLFD 83 (262)
T ss_dssp SCCTTCEEEEETCSSH--HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEEC-CCCSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEC-CCCCHHHHHHHHH
T ss_conf 8999998999389878--999999999986998999808867989999999999963983999976-7999999999999
Q ss_pred HHHH--CCCEEEEEEECCC
Q ss_conf 7653--5982999972676
Q gi|254780157|r 54 NARF--EGFKLIIAGAGGA 70 (165)
Q Consensus 54 ~~~~--~~~~viIa~AG~a 70 (165)
.... ..++++|..||..
T Consensus 84 ~~~~~~g~idilvnnaG~~ 102 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp HHHHHHCSEEEEEECCCCC
T ss_pred HHHHHCCCCCEEEECCCCC
T ss_conf 9999759998999899888
No 119
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=50.45 E-value=14 Score=17.32 Aligned_cols=143 Identities=11% Similarity=0.144 Sum_probs=70.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHH-HCCCC------EEEE---EEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHH
Q ss_conf 49999588169899999999999-80998------2654---53010387999988987653598299997267668511
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLD-TLGID------YEAR---IISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPG 75 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~-~~gI~------~~~~---V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpg 75 (165)
||.+|.||...-..-.+..+.+. .+.++ +++- ....+..++.+.++.+..+.-+. ++++.-=--+..||
T Consensus 2 Kil~i~GS~r~~s~t~~l~~~~~~~~e~~~idl~~~~lp~~~~~~~~~~~~~~~~~~~~i~~aD~-iI~~sP~y~~~~~~ 80 (174)
T 3gfs_A 2 NMLVINGTPRKHGRTRIAASYIAALYHTDLIDLSEFVLPVFNGEAEQSELLKVQELKQRVTKADA-IVLLSPEYHSGMSG 80 (174)
T ss_dssp -CEEEECCCCTTCHHHHHHHHHHHHTTCEEEETTTSCCCCCCCCHHHHTCHHHHHHHHHHHHCSS-EEEEEECSSSSCCH
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCE-EEEECHHHHCCCCH
T ss_conf 89999867998877999999998208806998103688888975343565889999999995891-69964677423769
Q ss_pred HHH---------HHCCCCEEEECCCCCCCCCCCCHH---HHHHCCCCCCCEE-EECCCCCCHHHHHHHHHHHHCCCHHHH
Q ss_conf 346---------522420366125776667500169---9840356986204-431675312289999999706999999
Q gi|254780157|r 76 MIA---------AMTSLPVLGVPIISQTLGGIDSLL---SIVQMPAGVPVGT-MAIGQSGAINASLLAVAILALDDKELT 142 (165)
Q Consensus 76 vva---------~~t~~PVIgVP~~~~~~~G~dall---S~vqMP~Gvpvat-v~vg~~~~~NAal~A~~Il~~~d~~i~ 142 (165)
.+- .+..+|+..+-..++..+|..++. ++++.-....+.. +.++.. .++. -=...++++.
T Consensus 81 ~lK~~iD~~~~~~~~~K~~~~v~~~~g~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~e~~~ 153 (174)
T 3gfs_A 81 ALKNALDFLSSEQFKYKPVALLAVAGGGDGGINALNNMRTVMRGVYANVIPKQLVLKPV-HIDV------ENATVAENIK 153 (174)
T ss_dssp HHHHHHHTCCHHHHTTCEEEEEEECCSTTCSHHHHHHHHHHHHHTTCEEEEEEEEECGG-GEET------TTTEECHHHH
T ss_pred HHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEECCEEEECCC-EECC------CCCCCCHHHH
T ss_conf 99999996552034797299999976775669999999999998799997770797232-0466------8883799999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780157|r 143 DRLNEWRTQQTISI 156 (165)
Q Consensus 143 ~kl~~~r~~~~~~v 156 (165)
++++++-++...-.
T Consensus 154 ~~~~~~~~~l~~~~ 167 (174)
T 3gfs_A 154 ESIKELVEELSMFA 167 (174)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 120
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=49.76 E-value=14 Score=17.25 Aligned_cols=64 Identities=20% Similarity=0.173 Sum_probs=46.7
Q ss_pred CCCEEEEEECCCCCHH---HHHHHHHHHHHCCCCEE-EEEEEHHCCHHHHHHHHHHHH--HCCCEEEEEE
Q ss_conf 8874999958816989---99999999998099826-545301038799998898765--3598299997
Q gi|254780157|r 3 IAPPVAIIMGSQSDWK---IMKYAADMLDTLGIDYE-ARIISAHRTPDRLIEFAKNAR--FEGFKLIIAG 66 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~---~~~~a~~~L~~~gI~~~-~~V~SAHR~p~~l~~~~~~~~--~~~~~viIa~ 66 (165)
..||++|+..+-.+.- ..+.|.+.|++.|++++ ++|-++--.|-....+++... .+.++.+|+.
T Consensus 11 ~~~kI~IV~s~~n~~It~~l~~~a~~~L~~~g~~~~~i~VPGa~EiP~~~~~~~~~~~~~~~~~d~vIal 80 (157)
T 2i0f_A 11 DAPHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVAL 80 (157)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 9998999977488899999999999999986997589996607665899999998744036775789998
No 121
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=49.65 E-value=6 Score=19.69 Aligned_cols=85 Identities=20% Similarity=0.253 Sum_probs=51.8
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE---HHCCHHHHHHHHHHHHHCCC---EEEEEEECC-CCCCHHHH
Q ss_conf 749999588169899999999999809982654530---10387999988987653598---299997267-66851134
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIIS---AHRTPDRLIEFAKNARFEGF---KLIIAGAGG-AAHLPGMI 77 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~S---AHR~p~~l~~~~~~~~~~~~---~viIa~AG~-aaaLpgvv 77 (165)
.|+.|+..+.-..-+.++..+.|+.+++. ..+.. ..++.+.+.++.+.+.+.+. +++|++-|+ -.-+.|.+
T Consensus 27 ~k~~ivtD~~v~~l~~~~~~~~l~~~~~~--~~~i~~gE~~Ks~~~~~~i~~~l~~~~~~r~~~viaiGGG~v~D~agf~ 104 (343)
T 3clh_A 27 QKALIISDSIVAGLHLPYLLERLKALEVR--VCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFA 104 (343)
T ss_dssp SCEEEEEEHHHHTTTHHHHHTTEECSCEE--EEEECSSGGGCSHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCCCCE--EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
T ss_conf 97999989716788999999985228948--9998998566999999999999998189986628982794476699999
Q ss_pred HHHCC--CCEEEECCC
Q ss_conf 65224--203661257
Q gi|254780157|r 78 AAMTS--LPVLGVPII 91 (165)
Q Consensus 78 a~~t~--~PVIgVP~~ 91 (165)
|+..- .|.|-+|+.
T Consensus 105 As~y~RGi~~i~iPTT 120 (343)
T 3clh_A 105 SSIYFRGIDFINIPTT 120 (343)
T ss_dssp HHHBTTCCEEEEEECS
T ss_pred HHHHCCCCEEEECCCC
T ss_conf 9987179138975862
No 122
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens AM1} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=49.51 E-value=14 Score=17.22 Aligned_cols=61 Identities=15% Similarity=0.234 Sum_probs=43.8
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHC---------------------CC
Q ss_conf 988749999588169899999999999809982654530103879999889876535---------------------98
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFE---------------------GF 60 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~---------------------~~ 60 (165)
+++-|+++|.|+++ ++...++..|.+.|- ++.+.+ |+.+++.+..++...+ +.
T Consensus 116 ~l~gK~~lVtGatg--giG~a~A~~la~~Ga--~V~i~~--R~~e~~~~~a~~l~~~~~~~~~~~D~s~~~~~~~~~~~~ 189 (287)
T 1lu9_A 116 SVKGKKAVVLAGTG--PVGMRSAALLAGEGA--EVVLCG--RKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA 189 (287)
T ss_dssp CCTTCEEEEETCSS--HHHHHHHHHHHHTTC--EEEEEE--SSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCH--HHHHHHHHHHHHCCC--EEEEEE--CCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCC
T ss_conf 98999899985876--999999999998699--899995--999999999886540488489998437478999985899
Q ss_pred EEEEEEEC
Q ss_conf 29999726
Q gi|254780157|r 61 KLIIAGAG 68 (165)
Q Consensus 61 ~viIa~AG 68 (165)
+++|..||
T Consensus 190 DIlinnag 197 (287)
T 1lu9_A 190 HFVFTAGA 197 (287)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
T ss_conf 89998998
No 123
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, antibiotic biosynthesis, NADPH; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=49.45 E-value=14 Score=17.22 Aligned_cols=28 Identities=32% Similarity=0.361 Sum_probs=17.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 887499995881698999999999998099
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGI 32 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI 32 (165)
++-||++|.|+.| -+...+++.|-+.|.
T Consensus 5 L~gKvalITGas~--GIG~aiA~~la~~Ga 32 (247)
T 2jah_A 5 LQGKVALITGASS--GIGEATARALAAEGA 32 (247)
T ss_dssp TTTCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
T ss_conf 5989899938787--899999999998799
No 124
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=49.24 E-value=15 Score=17.20 Aligned_cols=71 Identities=11% Similarity=0.112 Sum_probs=45.1
Q ss_pred CCCEEEEEECCCC--CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 8874999958816--98999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 3 IAPPVAIIMGSQS--DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 3 ~~pkV~Ii~GS~S--D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
.+.|+.+++|+-- =.-+..+..+.|++.|++.++...+..-.+ . ..++++++|+......-+
T Consensus 20 ~KkkIlvvC~sGigTS~ll~~ki~~~~~~~gi~~~v~~~~~~e~~-------~--~~~~~D~ii~t~~l~~~~------- 83 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIE-------T--YMDGVHLICTTARVDRSF------- 83 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTT-------T--STTSCSEEEESSCCCCCS-------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH-------C--CCCCCCEEEEECCCCCCC-------
T ss_conf 531899999997899999999999999983987413230376654-------0--357888999906643005-------
Q ss_pred CCCCEEEEC
Q ss_conf 242036612
Q gi|254780157|r 81 TSLPVLGVP 89 (165)
Q Consensus 81 t~~PVIgVP 89 (165)
...|||.+-
T Consensus 84 ~~iPvi~v~ 92 (113)
T 1tvm_A 84 GDIPLVHGM 92 (113)
T ss_dssp TTCCEECCH
T ss_pred CCCCEEEEE
T ss_conf 999889997
No 125
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) precursor; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=49.16 E-value=15 Score=17.19 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=29.5
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 9988749999588169899999999999809982
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDY 34 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~ 34 (165)
|+++-|+++|.|..|+.-+...+++.|.+.|...
T Consensus 4 ~~L~gK~alVTGas~~~GIG~aiA~~la~~Ga~V 37 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEI 37 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 2899998999898999639999999999879989
No 126
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=48.94 E-value=13 Score=17.63 Aligned_cols=54 Identities=11% Similarity=0.156 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCHHH--HHH-----HCCCCEEEECCCC-------CCCCCCCC
Q ss_conf 9999889876535982999972676685113--465-----2242036612577-------66675001
Q gi|254780157|r 46 DRLIEFAKNARFEGFKLIIAGAGGAAHLPGM--IAA-----MTSLPVLGVPIIS-------QTLGGIDS 100 (165)
Q Consensus 46 ~~l~~~~~~~~~~~~~viIa~AG~aaaLpgv--va~-----~t~~PVIgVP~~~-------~~~~G~da 100 (165)
+...++.++++..+++.+|.+-|-.. +-++ ++- .-..||||||-.- ..--|+|+
T Consensus 91 ~~~~~i~~~l~~~~Id~Li~IGGdgS-~~~a~~L~~~~~~~~~~i~vIgIPKTIDNDl~~tD~t~GF~T 158 (419)
T 3hno_A 91 REYERLIEVFKAHDIGYFFYNGGGDS-ADTCLKVSQLSGTLGYPIQAIHVPKTVDNDLPITDCCPGFGS 158 (419)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEESHHH-HHHHHHHHHHHHHTTCCCEEEEEECCTTCCCSSSSSCTTHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCHH-HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCHHH
T ss_conf 79999999999709987999758078-999999999999708994189612432578776332764788
No 127
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2}
Probab=48.60 E-value=12 Score=17.80 Aligned_cols=85 Identities=20% Similarity=0.227 Sum_probs=49.7
Q ss_pred CCCC-CEEEEEEC--CCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCC-----HH-HHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 9988-74999958--81698999999999998099826545301038-----79-9998898765359829999726766
Q gi|254780157|r 1 MNIA-PPVAIIMG--SQSDWKIMKYAADMLDTLGIDYEARIISAHRT-----PD-RLIEFAKNARFEGFKLIIAGAGGAA 71 (165)
Q Consensus 1 m~~~-pkV~Ii~G--S~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~-----p~-~l~~~~~~~~~~~~~viIa~AG~aa 71 (165)
||.+ .+|+|+.- .+.-..+++++.+.|++.|+++.+.--.++.. +. .+.+..+ ..+++|+ -|+.+
T Consensus 1 M~~~~k~Igiv~~~~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dlvi~-iGGDG 74 (292)
T 2an1_A 1 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQ-----QADLAVV-VGGDG 74 (292)
T ss_dssp ---CCCEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEECHHHHHH-----HCSEEEE-CSCHH
T ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCCCHHHCCC-----CCCEEEE-ECCCH
T ss_conf 99779589999539998999999999999997889999968888664877777554445055-----7778999-92685
Q ss_pred CCHHHHH--HHCCCCEEEECCC
Q ss_conf 8511346--5224203661257
Q gi|254780157|r 72 HLPGMIA--AMTSLPVLGVPII 91 (165)
Q Consensus 72 aLpgvva--~~t~~PVIgVP~~ 91 (165)
.+-.+.- .....|++|+...
T Consensus 75 T~L~a~~~~~~~~~PilGIn~G 96 (292)
T 2an1_A 75 NMLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp HHHHHHHHHTTSSCEEEEBCSS
T ss_pred HHHHHHHHHCCCCCCEEEEECC
T ss_conf 7999999837689838987658
No 128
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=47.98 E-value=15 Score=17.07 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=28.3
Q ss_pred CCCCC--EEEEEECCCCC--HHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 99887--49999588169--8999999999998099826545
Q gi|254780157|r 1 MNIAP--PVAIIMGSQSD--WKIMKYAADMLDTLGIDYEARI 38 (165)
Q Consensus 1 m~~~p--kV~Ii~GS~SD--~~~~~~a~~~L~~~gI~~~~~V 38 (165)
|+||+ ||.||.+|.+- ...++.+++-+++-|++.++.-
T Consensus 1 ~~~~~~mKilivy~S~~GnT~~lA~~ia~g~~~~G~ev~~~~ 42 (211)
T 1ydg_A 1 MSLTAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLK 42 (211)
T ss_dssp ----CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 998998689999969984899999999999886597799997
No 129
>2f48_A Diphosphate--fructose-6-phosphate 1- phosphotransferase; HET: FBP; 2.11A {Borrelia burgdorferi B31} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=47.57 E-value=15 Score=17.03 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHH--HHH-----HCCCCEEEECCCC
Q ss_conf 3879999889876535982999972676685113--465-----2242036612577
Q gi|254780157|r 43 RTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGM--IAA-----MTSLPVLGVPIIS 92 (165)
Q Consensus 43 R~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgv--va~-----~t~~PVIgVP~~~ 92 (165)
++++.+.+..++.+..+++.+|.+-|-. .+.++ ++- ....||||||-.-
T Consensus 150 ~~~e~~~~~~~~l~~~~Id~LviIGGdd-S~~~A~~Lae~~~~~~~~i~VIgVPKTI 205 (555)
T 2f48_A 150 ETEEHYNKALFVAKENNLNAIIIIGGDD-SNTNAAILAEYFKKNGENIQVIGVPKTI 205 (555)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEEESHH-HHHHHHHHHHHHHHTTCCCEEEEEEEET
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCHH-HHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 7778999999999863898899978768-9999999999998616796089841353
No 130
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=47.42 E-value=16 Score=17.02 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=53.8
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH-----CCHHHHHHH----HHHHHHCCCEE-EEEEECCCCC
Q ss_conf 8874999958816989999999999980998265453010-----387999988----98765359829-9997267668
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAH-----RTPDRLIEF----AKNARFEGFKL-IIAGAGGAAH 72 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAH-----R~p~~l~~~----~~~~~~~~~~v-iIa~AG~aaa 72 (165)
|+..++|+=-+---+.+.++..+.|-. -+|.+.-.++| |+++++.++ ++.....+++. +|||--.++.
T Consensus 21 mn~PIgvfDSGvGGLtvl~~l~~~lP~--~~~iY~~D~~~~PYG~ks~eei~~~~~~~~~~L~~~g~~~iVIACNTAs~~ 98 (286)
T 2jfq_A 21 MNKPIGVIDSGVGGLTVAKEIMRQLPN--ETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAV 98 (286)
T ss_dssp CCSCEEEEESSSTTHHHHHHHHHHCTT--CCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
T ss_conf 899889997897779999999997899--998999458889888899999999999999999866999999816758999
Q ss_pred CHHHHHHHCCCCEEEEC
Q ss_conf 51134652242036612
Q gi|254780157|r 73 LPGMIAAMTSLPVLGVP 89 (165)
Q Consensus 73 Lpgvva~~t~~PVIgVP 89 (165)
..-.+-.....||||+.
T Consensus 99 al~~l~~~~~ipiigii 115 (286)
T 2jfq_A 99 ALEYLQKTLSISVIGVI 115 (286)
T ss_dssp HHHHHHHHCSSEEEESH
T ss_pred HHHHHHHHCCCCEEEEC
T ss_conf 99999986699889613
No 131
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=47.15 E-value=16 Score=16.99 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=26.1
Q ss_pred CEEEEEECCCCC--HHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 749999588169--8999999999998099826545
Q gi|254780157|r 5 PPVAIIMGSQSD--WKIMKYAADMLDTLGIDYEARI 38 (165)
Q Consensus 5 pkV~Ii~GS~SD--~~~~~~a~~~L~~~gI~~~~~V 38 (165)
|||.|+.||.+- ..+++..++.|.+.|++.++.-
T Consensus 1 pki~I~Y~S~tG~te~~A~~la~~l~~~g~~v~~~~ 36 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRD 36 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 959999999863899999999999887598301023
No 132
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix K1}
Probab=47.13 E-value=16 Score=16.99 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=21.3
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 998874999958816989999999999980998
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGID 33 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~ 33 (165)
|+.+-||++|.|+.+ -+...+++.|-+.|..
T Consensus 3 ~~L~gK~alVTG~s~--GIG~aiA~~la~~Ga~ 33 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSS--GLGFASALELARNGAR 33 (260)
T ss_dssp CCCTTCEEEEETTTS--HHHHHHHHHHHHTTCE
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCE
T ss_conf 897999899918786--8999999999987999
No 133
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana}
Probab=47.10 E-value=16 Score=16.99 Aligned_cols=76 Identities=21% Similarity=0.260 Sum_probs=49.5
Q ss_pred CCEEEEEECCCCC---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 8749999588169---8999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSD---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
..+|.|+|=|+.| =|...++...|+.+|++|......-+ ++ ..+++++. .+.
T Consensus 17 ~~~Vvvf~K~t~~~P~C~~c~~ak~lL~~~~~~~~~idv~~~--~~-~~~~l~~~----------------------tg~ 71 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILEN--EM-LRQGLKEY----------------------SNW 71 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGC--HH-HHHHHHHH----------------------HTC
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC--HH-HHHHHHHH----------------------CCC
T ss_conf 499899975688999886899999999975997527761551--87-99999863----------------------247
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 24203661257766675001699840
Q gi|254780157|r 81 TSLPVLGVPIISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 81 t~~PVIgVP~~~~~~~G~dallS~vq 106 (165)
.+.|.|= +.+...+|.|-|..+.+
T Consensus 72 ~TvPqIF--i~g~~IGG~d~l~~l~~ 95 (109)
T 3ipz_A 72 PTFPQLY--IGGEFFGGCDITLEAFK 95 (109)
T ss_dssp SSSCEEE--ETTEEEECHHHHHHHHH
T ss_pred CCCCEEE--ECCEEECCHHHHHHHHH
T ss_conf 8888598--99989877899999998
No 134
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=47.08 E-value=16 Score=16.98 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=41.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE------------------EEEHHCCHHHHHHHHHHHHH--CCC
Q ss_conf 9988749999588169899999999999809982654------------------53010387999988987653--598
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR------------------IISAHRTPDRLIEFAKNARF--EGF 60 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~------------------V~SAHR~p~~l~~~~~~~~~--~~~ 60 (165)
|+++-||++|.|+.+. +...+++.|-+-|...-+. +..=-+.++.+.++.++..+ ..+
T Consensus 1 M~L~gK~~lVTG~s~G--IG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 78 (245)
T 1uls_A 1 MRLKDKAVLITGAAHG--IGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRL 78 (245)
T ss_dssp CTTTTCEEEEESTTSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCC
T ss_conf 9889989999377878--99999999998799999997987899999987599699995799999999999999973999
Q ss_pred EEEEEEECCC
Q ss_conf 2999972676
Q gi|254780157|r 61 KLIIAGAGGA 70 (165)
Q Consensus 61 ~viIa~AG~a 70 (165)
+++|..||..
T Consensus 79 DiLVnnAG~~ 88 (245)
T 1uls_A 79 DGVVHYAGIT 88 (245)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
T ss_conf 8999899999
No 135
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=46.86 E-value=16 Score=16.96 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=27.3
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 8749999588169899999999999809982654530
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIIS 40 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~S 40 (165)
..+|.+. |.++=|+.+++...|++.||+|+..-..
T Consensus 11 m~~V~ly--s~~~Cp~C~~ak~~L~~~~i~y~~i~Vd 45 (92)
T 3ic4_A 11 MAEVLMY--GLSTCPHCKRTLEFLKREGVDFEVIWID 45 (92)
T ss_dssp CSSSEEE--ECTTCHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CCCEEEE--ECCCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 9888999--8899866999999999839986899984
No 136
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GTT; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=46.69 E-value=16 Score=16.95 Aligned_cols=78 Identities=17% Similarity=0.323 Sum_probs=46.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCC
Q ss_conf 87499995881698999999999998099826545301038799998898765359829999726766851134652242
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSL 83 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~ 83 (165)
..||.|. |.+.=|...++...|+..||+|+...+.-+...+.+.+..+.. . ....+..+.
T Consensus 3 ~mki~IY--t~~~Cp~C~~ak~lL~~~gi~~~~~~vd~~~~~~~~~~~~~~~---~---------------~~~~~~~tv 62 (89)
T 3msz_A 3 AMKVKIY--TRNGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQS---G---------------KVIFPISTV 62 (89)
T ss_dssp CCCEEEE--ECTTCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTT---T---------------CCSSCCCSS
T ss_pred CCEEEEE--ECCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH---H---------------CCCCCCCCC
T ss_conf 8689998--5899977999999999759984466505717789999998743---0---------------136899412
Q ss_pred CEEEECCCCCCCCCCCCHHH
Q ss_conf 03661257766675001699
Q gi|254780157|r 84 PVLGVPIISQTLGGIDSLLS 103 (165)
Q Consensus 84 PVIgVP~~~~~~~G~dallS 103 (165)
|+|=+ .+...+|.|-|..
T Consensus 63 P~Ifi--~g~~IGG~~el~~ 80 (89)
T 3msz_A 63 PQIFI--DDEHIGGFTELKA 80 (89)
T ss_dssp CEEEE--TTEEEESHHHHHH
T ss_pred CEEEE--CCEEEECHHHHHH
T ss_conf 77998--9979978799999
No 137
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=46.23 E-value=16 Score=16.90 Aligned_cols=92 Identities=12% Similarity=0.069 Sum_probs=59.3
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCC-CCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH-
Q ss_conf 9988749999588169899999999999809-98265453010387999988987653598299997267668511346-
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLG-IDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIA- 78 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~g-I~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva- 78 (165)
|+.+.+|+.+-|-..+ +.++.-..=.+... ....+......-.|.+-.+..+.+.+.+++||-.+||.++ .|++.
T Consensus 123 ~tkt~kvG~vgg~~~~-~~~~gF~~Gak~~n~~~~~~~~~gs~~d~~k~~~~a~~li~~GaDVI~~~ag~~~--~gv~~a 199 (296)
T 2hqb_A 123 MSETHKVGVIAAFPWQ-PEVEGFVDGAKYMNESEAFVRYVGEWTDADKALELFQELQKEQVDVFYPAGDGYH--VPVVEA 199 (296)
T ss_dssp TCSSSEEEEEESCTTC-HHHHHHHHHHHHTTCCEEEEEECSSSSCHHHHHHHHHHHHTTTCCEEECCCTTTH--HHHHHH
T ss_pred HCCCCCCCEECCCCCH-HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCC--HHHHHH
T ss_conf 1678840146052344-8888999988753665159997688668378999999999859997610368856--699999
Q ss_pred -HHCCCCEEEECCCCCCC
Q ss_conf -52242036612577666
Q gi|254780157|r 79 -AMTSLPVLGVPIISQTL 95 (165)
Q Consensus 79 -~~t~~PVIgVP~~~~~~ 95 (165)
-..-..+||+-.+...+
T Consensus 200 a~e~g~~~IG~d~dq~~~ 217 (296)
T 2hqb_A 200 IKDQGDFAIGYVGDQADL 217 (296)
T ss_dssp HHHHTCEEEEEESCCSSS
T ss_pred HHHCCCEECCCCCCHHHH
T ss_conf 997498034322754442
No 138
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A*
Probab=46.17 E-value=16 Score=16.89 Aligned_cols=65 Identities=12% Similarity=0.135 Sum_probs=33.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCC------------------------EEEEEEEHHCCHHHHHHHHHHHHH-
Q ss_conf 8874999958816989999999999980998------------------------265453010387999988987653-
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGID------------------------YEARIISAHRTPDRLIEFAKNARF- 57 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~------------------------~~~~V~SAHR~p~~l~~~~~~~~~- 57 (165)
++-||++|.|+.+- +...+++.|.+.|.. +....+ =-+.++.+.++.+...+
T Consensus 32 L~gK~alVTGas~G--IG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~g~~~~~~~~-Dv~~~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 32 LKGKIALVTGASYG--IGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVC-DVTDEDGIQAMVAQIESE 108 (291)
T ss_dssp CTTCEEEEETCSSH--HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEEC-CTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE-ECCCHHHHHHHHHHHHHH
T ss_conf 99987999287859--999999999987998999979999999999999854995899996-289999999999999997
Q ss_pred -CCCEEEEEEECCC
Q ss_conf -5982999972676
Q gi|254780157|r 58 -EGFKLIIAGAGGA 70 (165)
Q Consensus 58 -~~~~viIa~AG~a 70 (165)
..++++|..||..
T Consensus 109 ~G~iDilVnnAG~~ 122 (291)
T 3cxt_A 109 VGIIDILVNNAGII 122 (291)
T ss_dssp TCCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
T ss_conf 69986899899989
No 139
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=46.05 E-value=8.7 Score=18.65 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 387999988987653598299997267668
Q gi|254780157|r 43 RTPDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 43 R~p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
-+.+.+.+++++.+.+. .|++++||+|.+
T Consensus 29 ~~~~~~a~~i~~~k~k~-IvvlTGAGISt~ 57 (323)
T 1j8f_A 29 LTLEGVARYMQSERCRR-VICLVGAGISTS 57 (323)
T ss_dssp SSHHHHHHHHHSTTCCC-EEEEECGGGTGG
T ss_pred CCHHHHHHHHHHCCCCE-EEEEECCEEEHH
T ss_conf 26999999997478885-999948710031
No 140
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=46.00 E-value=16 Score=16.88 Aligned_cols=80 Identities=10% Similarity=0.002 Sum_probs=44.3
Q ss_pred EEEEECCCCCH---HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE-CCCCCCHHHHHHHCC
Q ss_conf 99995881698---99999999999809982654530103879999889876535982999972-676685113465224
Q gi|254780157|r 7 VAIIMGSQSDW---KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGA-GGAAHLPGMIAAMTS 82 (165)
Q Consensus 7 V~Ii~GS~SD~---~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A-G~aaaLpgvva~~t~ 82 (165)
|++++.+-+|- ...+.....+.+.| |.+.+......++...++.+....++++-+|... .....+.- -.....
T Consensus 2 Igvi~p~~~~~f~~~li~gi~~~a~~~g--y~l~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~-~~~~~~ 78 (276)
T 2h0a_A 2 VSVLLPFVATEFYRRLVEGIEGVLLEQR--YDLALFPILSLARLKRYLENTTLAYLTDGLILASYDLTERFEE-GRLPTE 78 (276)
T ss_dssp EEEEECCSCCHHHHHHHHHHHHHHGGGT--CEEEECCCCSCCCCC---------CCCSEEEEESCCCC-------CCSCS
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH-HHHHCC
T ss_conf 8999788878899999999999999869--9899997899879999999999855999899954779989999-986439
Q ss_pred CCEEEEC
Q ss_conf 2036612
Q gi|254780157|r 83 LPVLGVP 89 (165)
Q Consensus 83 ~PVIgVP 89 (165)
.|||-+-
T Consensus 79 iPvV~~~ 85 (276)
T 2h0a_A 79 RPVVLVD 85 (276)
T ss_dssp SCEEEES
T ss_pred CCEEEEE
T ss_conf 9489994
No 141
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics, protein structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=45.94 E-value=16 Score=16.87 Aligned_cols=129 Identities=13% Similarity=0.111 Sum_probs=66.0
Q ss_pred CCCEEEEEECCCCCH----HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH
Q ss_conf 887499995881698----9999999999980998265453010387999988987653598299997267668511346
Q gi|254780157|r 3 IAPPVAIIMGSQSDW----KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIA 78 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~----~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva 78 (165)
.+|.+++++.++-+- .+.+.+...+++.|..+.+.... -..+...++......++++.+|...-......-.-.
T Consensus 10 ~~~~Ia~~~~~d~~~~~~~~~~~gi~~~~~~~g~~~~l~~~~--~~~d~~~~~~~~~~~~~vdgiIv~~~~~~~~~~~~~ 87 (289)
T 3g85_A 10 SKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVICP--YKTDCLHLEKGISKENSFDAAIIANISNYDLEYLNK 87 (289)
T ss_dssp -CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEEEEE--ECTTCGGGCGGGSTTTCCSEEEESSCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC--CCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
T ss_conf 999899996875677899999999999999869967999868--971099999999985797889977876678999998
Q ss_pred HHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC-------------CCHHHHHHH
Q ss_conf 5224203661257766675001699840356986204431675312289999999706-------------999999999
Q gi|254780157|r 79 AMTSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL-------------DDKELTDRL 145 (165)
Q Consensus 79 ~~t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~-------------~d~~i~~kl 145 (165)
.....|||-+-. ..+++| + |+.|+ +.|+..|++-|.- ....-++|+
T Consensus 88 ~~~~iP~V~~~~----------------~~~~~~--~--V~~D~-~~a~~~a~~~L~~~G~r~i~~i~~~~~~~~~~~R~ 146 (289)
T 3g85_A 88 ASLTLPIILFNR----------------LSNKYS--S--VNVDN-YKMGEKASLLFAKKRYKSAAAILTESLNDAMDNRN 146 (289)
T ss_dssp CCCSSCEEEESC----------------CCSSSE--E--EEECH-HHHHHHHHHHHHHTTCCBCEEEECCCSSHHHHHHH
T ss_pred HCCCCCEEEECC----------------CCCCCC--E--EEECC-HHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHH
T ss_conf 549972899766----------------889999--8--99787-99999999999974997341145676783899998
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780157|r 146 NEWRTQQTI 154 (165)
Q Consensus 146 ~~~r~~~~~ 154 (165)
.-|++-+++
T Consensus 147 ~gf~~a~~~ 155 (289)
T 3g85_A 147 KGFIETCHK 155 (289)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 600367887
No 142
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=45.78 E-value=16 Score=16.86 Aligned_cols=90 Identities=19% Similarity=0.281 Sum_probs=50.8
Q ss_pred CCCCCEEEEEECC--CCCHHHHHHHHHHHHHCCCCEEEEEEEHHC------CHHHHHHH------HH--HHHHCCCEEEE
Q ss_conf 9988749999588--169899999999999809982654530103------87999988------98--76535982999
Q gi|254780157|r 1 MNIAPPVAIIMGS--QSDWKIMKYAADMLDTLGIDYEARIISAHR------TPDRLIEF------AK--NARFEGFKLII 64 (165)
Q Consensus 1 m~~~pkV~Ii~GS--~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR------~p~~l~~~------~~--~~~~~~~~viI 64 (165)
|+...+|+|+.-. +.=...++++...|++-|+++.+....+.- .|+.+... .. ....++++++|
T Consensus 1 M~~~r~v~lv~~~~k~~a~~~a~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi 80 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVL 80 (307)
T ss_dssp ----CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEE
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 99888999998099989999999999999978998999843133146544674112203753210246534445645899
Q ss_pred EEECCCCCCHHHHH--HHCCCCEEEECCC
Q ss_conf 97267668511346--5224203661257
Q gi|254780157|r 65 AGAGGAAHLPGMIA--AMTSLPVLGVPII 91 (165)
Q Consensus 65 a~AG~aaaLpgvva--~~t~~PVIgVP~~ 91 (165)
+. |+.+.+-.+.- .....||+|+-..
T Consensus 81 vl-GGDGT~L~aa~~~~~~~~PilGIN~G 108 (307)
T 1u0t_A 81 VL-GGDGTFLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EE-ECHHHHHHHHHHHHHHTCCEEEEECS
T ss_pred EE-CCCHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 97-68778999999746469839997589
No 143
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=45.52 E-value=17 Score=16.83 Aligned_cols=85 Identities=9% Similarity=0.106 Sum_probs=58.5
Q ss_pred CCCEEEEEECCCCCH---HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCC-CCHHHHH
Q ss_conf 887499995881698---999999999998099826545301038799998898765359829999726766-8511346
Q gi|254780157|r 3 IAPPVAIIMGSQSDW---KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAA-HLPGMIA 78 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~---~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aa-aLpgvva 78 (165)
.+..|++++-+.++- .+.+.+...+++.| |.+.+.+.+..+++-.++++.....+++.+|....... ...-...
T Consensus 6 ~s~~Iglv~~~~~~~f~~~i~~gi~~~~~~~g--y~~~l~~~~~~~~~e~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~ 83 (289)
T 1dbq_A 6 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKG--YTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLE 83 (289)
T ss_dssp --CEEEEEESCTTSHHHHHHHHHHHHHHHHHT--CEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 99979999699988899999999999999869--9999996899989999999999855988665310012325899998
Q ss_pred HHCCCCEEEEC
Q ss_conf 52242036612
Q gi|254780157|r 79 AMTSLPVLGVP 89 (165)
Q Consensus 79 ~~t~~PVIgVP 89 (165)
..-..|++-+-
T Consensus 84 ~~~~~~vv~~~ 94 (289)
T 1dbq_A 84 EYRHIPMVVMD 94 (289)
T ss_dssp HTTTSCEEEEE
T ss_pred HCCCCCEEEEC
T ss_conf 52699789943
No 144
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, MCSG; HET: MSE HXA; 2.05A {Streptococcus pyogenes serotype M1}
Probab=45.06 E-value=17 Score=16.79 Aligned_cols=27 Identities=19% Similarity=0.310 Sum_probs=21.0
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 98874999958816989999999999980998
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGID 33 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~ 33 (165)
|+.+|++|+.-|++|+|- ..+++++|.
T Consensus 2 ~~M~kI~IitDSt~dl~~-----~~~~~~~I~ 28 (282)
T 2g7z_A 2 NAMGTIKIVTDSSITIEP-----ELIKALDIT 28 (282)
T ss_dssp -CCSCEEEEEETTBCCCH-----HHHHHHTCE
T ss_pred CCCCCEEEEECCCCCCCH-----HHHHHCCCE
T ss_conf 987887999837889999-----999878948
No 145
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=44.88 E-value=6.1 Score=19.68 Aligned_cols=88 Identities=11% Similarity=0.152 Sum_probs=56.0
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEH-----HCCHHHHHH----HHHHHHH-CCCE-EEEEEECCC
Q ss_conf 9887499995881698999999999998099826545301-----038799998----8987653-5982-999972676
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISA-----HRTPDRLIE----FAKNARF-EGFK-LIIAGAGGA 70 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SA-----HR~p~~l~~----~~~~~~~-~~~~-viIa~AG~a 70 (165)
+.+|+++|+=-+---+.+.++..+.|-. -++.+.-.+| .|+++++.+ +++...+ .+++ ++|||---+
T Consensus 19 ~~~p~IgvfDSGvGGLtVl~~l~~~lP~--~~~iY~~D~a~~PYG~ks~~~i~~~~~~~~~~ll~k~g~~~IViACNTas 96 (285)
T 2jfn_A 19 EPRPTVLVFDSGVGGLSVYDEIRHLLPD--LHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTAS 96 (285)
T ss_dssp -CEEEEEEEESSSTHHHHHHHHHHHSTT--SEEEEEECTTTCCTTTSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 9999589983883589999999987899--99899954787998999999999999999999986067768996064778
Q ss_pred CCCHHHHHHHCCCCEEEECCC
Q ss_conf 685113465224203661257
Q gi|254780157|r 71 AHLPGMIAAMTSLPVLGVPII 91 (165)
Q Consensus 71 aaLpgvva~~t~~PVIgVP~~ 91 (165)
+...-.+-.....||||+-+.
T Consensus 97 a~a~~~L~~~~~~piigiip~ 117 (285)
T 2jfn_A 97 TVSLPALREKFDFPVVGVVPA 117 (285)
T ss_dssp HHHHHHHHHHCSSCEECCCCC
T ss_pred HHHHHHHHHHCCCCEECCCHH
T ss_conf 998999998739981234489
No 146
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=44.79 E-value=17 Score=16.76 Aligned_cols=67 Identities=13% Similarity=0.178 Sum_probs=32.9
Q ss_pred CCCEEEEEECCCCC----------------------HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH--C
Q ss_conf 88749999588169----------------------89999999999980998265453010387999988987653--5
Q gi|254780157|r 3 IAPPVAIIMGSQSD----------------------WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF--E 58 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD----------------------~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~--~ 58 (165)
..-||++|.|+.|- .+-.++..+.|+.+|..+....+- -+.++.+.++.+...+ .
T Consensus 42 lenKvalITGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~g~~~~~~~~D-vtd~~~v~~~~~~~~~~~G 120 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD-VSKKEEISEVINKILTEHK 120 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECC-TTCHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHHHCC
T ss_conf 899789990888789999999999869999999799999999999999639948999834-8999999999999999729
Q ss_pred CCEEEEEEECCC
Q ss_conf 982999972676
Q gi|254780157|r 59 GFKLIIAGAGGA 70 (165)
Q Consensus 59 ~~~viIa~AG~a 70 (165)
.++++|..||..
T Consensus 121 ~iDiLVnNAG~~ 132 (285)
T 2c07_A 121 NVDILVNNAGIT 132 (285)
T ss_dssp CCCEEEECCCCC
T ss_pred CCEEEEECCCCC
T ss_conf 970999899766
No 147
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=44.75 E-value=17 Score=16.76 Aligned_cols=66 Identities=15% Similarity=0.245 Sum_probs=39.6
Q ss_pred CCEEEEEECCCC----------------------CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH--CC
Q ss_conf 874999958816----------------------989999999999980998265453010387999988987653--59
Q gi|254780157|r 4 APPVAIIMGSQS----------------------DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF--EG 59 (165)
Q Consensus 4 ~pkV~Ii~GS~S----------------------D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~--~~ 59 (165)
.-||++|.|+.+ |.+-.++..+.+++.|..+....+-. ..++.+.++++...+ ..
T Consensus 21 ~gKVAlVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv-t~~~~v~~~v~~~~~~~G~ 99 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV-RSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEC-CCHHHHHHHHHHHHHHCCC
T ss_conf 997899927675999999999998799999997998999999999985399289999207-9999999999999997599
Q ss_pred CEEEEEEECCC
Q ss_conf 82999972676
Q gi|254780157|r 60 FKLIIAGAGGA 70 (165)
Q Consensus 60 ~~viIa~AG~a 70 (165)
++++|..||..
T Consensus 100 iDiLVnnAG~~ 110 (277)
T 2rhc_B 100 VDVLVNNAGRP 110 (277)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
T ss_conf 97999899999
No 148
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=44.74 E-value=17 Score=16.75 Aligned_cols=52 Identities=21% Similarity=0.332 Sum_probs=43.6
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHH
Q ss_conf 9988749999588169899999999999809982654530103879999889876
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~ 55 (165)
|.+ ||=..|.|||- .+...+.++++++.=.|++...|+|++-+.+.+.++++
T Consensus 1 M~~-~K~I~IlGsTG--SIG~~tL~Vi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f 52 (388)
T 1r0k_A 1 MSQ-PRTVTVLGATG--SIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT 52 (388)
T ss_dssp -CC-CEEEEEETTTS--HHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred CCC-CCEEEEECCCC--HHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 999-88899988586--98999999998295870899999589899999999996
No 149
>1bdb_A CIS-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase; NAD-dependent oxidoreductase, short-chain alcohol dehydrogenase, PCB degradation; HET: NAD; 2.00A {Pseudomonas SP} SCOP: c.2.1.2
Probab=44.73 E-value=17 Score=16.75 Aligned_cols=48 Identities=19% Similarity=0.312 Sum_probs=31.1
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHH
Q ss_conf 998874999958816989999999999980998265453010387999988987
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKN 54 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~ 54 (165)
|+++-||++|.|+.| -+...+++.|-+-|...- -.-|+.+++.+..++
T Consensus 1 M~L~gKvalITGas~--GIG~aiA~~la~~Ga~V~----i~~r~~~~l~~~~~~ 48 (277)
T 1bdb_A 1 MKLKGEAVLITGGAS--GLGRALVDRFVAEGAKVA----VLDKSAERLAELETD 48 (277)
T ss_dssp CTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEE----EEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEE----EEECCHHHHHHHHHH
T ss_conf 988998999948787--999999999998899999----997998999999997
No 150
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=44.46 E-value=17 Score=16.73 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=26.9
Q ss_pred CCEEEEEECCCCCH--HHHHHHHHHHHHCCCCEEEEE
Q ss_conf 87499995881698--999999999998099826545
Q gi|254780157|r 4 APPVAIIMGSQSDW--KIMKYAADMLDTLGIDYEARI 38 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~--~~~~~a~~~L~~~gI~~~~~V 38 (165)
+|||.||.+|.+-- ..++.+.+-++.-|++.+..-
T Consensus 5 ~~Kilivy~S~~GnT~~la~~i~~g~~~~g~ev~~~~ 41 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRT 41 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEB
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 9828999938980899999999998864496689984
No 151
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,, transport protein; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=44.39 E-value=17 Score=16.72 Aligned_cols=84 Identities=11% Similarity=0.102 Sum_probs=57.2
Q ss_pred CEEEEEECCCCCHHHHHHHHHHH----HHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 74999958816989999999999----98099826545301038799998898765359829999726766851134652
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADML----DTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L----~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
-|+++++-+-+| |+......-+ ++.+ .+++.+..++-.+.+..+.++++..++++.+|....-...+...+-..
T Consensus 3 ~kIgv~~~~~~~-~f~~~~~~g~~~~a~~~~-~~~l~~~~~~~d~~~q~~~i~~~i~~~vD~iiv~~~d~~~~~~~l~~a 80 (309)
T 2fvy_A 3 TRIGVTIYKYDD-NFMSVVRKAIEQDAKAAP-DVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKA 80 (309)
T ss_dssp EEEEEEESCTTS-HHHHHHHHHHHHHHHTCT-TEEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHH
T ss_pred CEEEEEECCCCC-HHHHHHHHHHHHHHHHCC-CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 889999789989-899999999999998769-928999759999999999999999769999996674224159999999
Q ss_pred --CCCCEEEECC
Q ss_conf --2420366125
Q gi|254780157|r 81 --TSLPVLGVPI 90 (165)
Q Consensus 81 --t~~PVIgVP~ 90 (165)
...|||.+-.
T Consensus 81 ~~~gipvv~~d~ 92 (309)
T 2fvy_A 81 RGQNVPVVFFNK 92 (309)
T ss_dssp HTTTCCEEEESS
T ss_pred HHCCCCEEEECC
T ss_conf 986997899657
No 152
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=44.36 E-value=8.6 Score=18.68 Aligned_cols=144 Identities=13% Similarity=0.010 Sum_probs=71.1
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHC--CCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE---CCCCCCHHHH
Q ss_conf 8874999958816989999999999980--9982654530103879999889876535982999972---6766851134
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTL--GIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGA---GGAAHLPGMI 77 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~--gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A---G~aaaLpgvv 77 (165)
.+++++.| .-++|.+-+-+.++-+.++ | |.+.-. .. .-+++++. -+..+-...- |+..++.-.+
T Consensus 26 ~r~~iAlI-AhD~dK~~lv~~ak~~~~lL~G--f~LvAT---~G---Ta~~L~e~--ggl~v~~v~~~~~gg~p~I~d~I 94 (178)
T 1vmd_A 26 KKKRIALI-AHDRRKRDLLEWVSFNLGTLSK--HELYAT---GT---TGALLQEK--LGLKVHRLKSGPLGGDQQIGAMI 94 (178)
T ss_dssp SSCEEEEE-ECGGGHHHHHHHHHHSHHHHTT--SEEEEC---HH---HHHHHHHH--HCCCCEECSCGGGTHHHHHHHHH
T ss_pred CCCEEEEE-ECCCCHHHHHHHHHHHHHHHCC--CEEEEE---CC---HHHHHHHC--CCCEEEEEEECCCCCCCCHHHHH
T ss_conf 14337898-5327749999999999999649--749970---53---89999873--59748986403788885299999
Q ss_pred HHHCCCCEEEECCCCCCCCCCCCHHHHHH--CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 65224203661257766675001699840--3569862044316753122899999997069999999999999999999
Q gi|254780157|r 78 AAMTSLPVLGVPIISQTLGGIDSLLSIVQ--MPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQTIS 155 (165)
Q Consensus 78 a~~t~~PVIgVP~~~~~~~G~dallS~vq--MP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~~~ 155 (165)
...-..=||..|-....-....--+.+.+ .-.+||+.|. .++| .|.+-|..-.-..+..+ ..+.+|.++..++
T Consensus 95 ~~geI~lVINt~d~~~~~~~~~D~~~IRR~av~~~IP~~Tt---l~tA-~a~i~ai~~~~~~~~~v-~~~qey~~~r~~~ 169 (178)
T 1vmd_A 95 AEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAIT---RSTA-DFLISSPLMNDVYEKIQ-IDYEEELERRIRK 169 (178)
T ss_dssp HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESS---HHHH-HHHHHSGGGGSCEEEEE-ECHHHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEC---HHHH-HHHHHHHHHCCCCCCCC-CCHHHHHHHHHHH
T ss_conf 86982189981699777766026999999999849723546---9999-99999897467777577-8889999999987
Q ss_pred HHHHHHH
Q ss_conf 9840540
Q gi|254780157|r 156 ISEYPKD 162 (165)
Q Consensus 156 v~~~~~~ 162 (165)
+...+++
T Consensus 170 ~~~~~~~ 176 (178)
T 1vmd_A 170 VVEGEEE 176 (178)
T ss_dssp HHC----
T ss_pred HCCCCCC
T ss_conf 6145556
No 153
>3g1w_A Sugar ABC transporter; sugar-binding protein, target 11229F, transport protein, structural genomics, PSI-2; 2.02A {Bacillus halodurans c-125}
Probab=44.06 E-value=18 Score=16.69 Aligned_cols=87 Identities=17% Similarity=0.124 Sum_probs=58.3
Q ss_pred CCCCEEEE-EECCCCCHH--HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH
Q ss_conf 98874999-958816989--999999999980998265453010387999988987653598299997267668511346
Q gi|254780157|r 2 NIAPPVAI-IMGSQSDWK--IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIA 78 (165)
Q Consensus 2 ~~~pkV~I-i~GS~SD~~--~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva 78 (165)
..+.++.+ ...|.+|.- +.+.+.+..+++|++.++. ......+++..+.++++..++++.+|....-...+...+.
T Consensus 2 ~~~~~~~~i~~~~~~~f~~~v~~G~~~aa~~~g~~l~~~-~~~~~d~~~q~~~l~~~i~~~~dgIii~~~d~~~~~~~l~ 80 (305)
T 3g1w_A 2 SLNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYR-GAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTIN 80 (305)
T ss_dssp ---CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEE-ECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHH
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEE-ECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
T ss_conf 988879999589998399999999999999729989999-7999999999999999997698999997885676899999
Q ss_pred H--HCCCCEEEEC
Q ss_conf 5--2242036612
Q gi|254780157|r 79 A--MTSLPVLGVP 89 (165)
Q Consensus 79 ~--~t~~PVIgVP 89 (165)
. ....||+.+-
T Consensus 81 ~~~~~gIpvv~~d 93 (305)
T 3g1w_A 81 KAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHTTCCEEEES
T ss_pred HHHHCCCCEEEEE
T ss_conf 9997699568873
No 154
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A*
Probab=43.54 E-value=18 Score=16.64 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=27.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 88749999588169899999999999809982
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDY 34 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~ 34 (165)
++-|+++|.|+.|.+-+...+++.|.+.|...
T Consensus 7 L~gK~~lITGass~~GIG~aia~~la~~Ga~V 38 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAEL 38 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 38997999899985018999999999869999
No 155
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron transport, oxidoreductase; 1.80A {Ectromelia virus moscow} PDB: 2hzf_A 2hze_B
Probab=43.42 E-value=18 Score=16.62 Aligned_cols=76 Identities=20% Similarity=0.333 Sum_probs=44.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCC---EEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 874999958816989999999999980998---26545301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGID---YEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~---~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
+.+|.|.+ +|.=|...++...|+++|++ |++.-..-......+.++++.. .+.
T Consensus 18 ~~~Vvifs--k~~Cp~C~~aK~lL~~~~i~~~~~~~~e~d~~~~~~~~~~~l~~~----------------------tg~ 73 (114)
T 2hze_A 18 NNKVTIFV--KYTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQI----------------------TGG 73 (114)
T ss_dssp TTCEEEEE--CTTCHHHHHHHHHHTTSCBCTTSEEEEEGGGSSSHHHHHHHHHHH----------------------HSC
T ss_pred CCCEEEEE--CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHH----------------------CCC
T ss_conf 59799998--998856999999999809987435788615642418999999985----------------------458
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHH
Q ss_conf 2420366125776667500169984
Q gi|254780157|r 81 TSLPVLGVPIISQTLGGIDSLLSIV 105 (165)
Q Consensus 81 t~~PVIgVP~~~~~~~G~dallS~v 105 (165)
.+.|.|=+ .+...+|.|-|..+.
T Consensus 74 ~tvPqIfi--~G~~IGG~ddl~~l~ 96 (114)
T 2hze_A 74 KTVPRIFF--GKTSIGGYSDLLEID 96 (114)
T ss_dssp CSSCEEEE--TTEEEESHHHHHHHH
T ss_pred CCCCEEEE--CCEEEECHHHHHHHH
T ss_conf 78986889--997980679999999
No 156
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structural genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=43.28 E-value=18 Score=16.61 Aligned_cols=84 Identities=8% Similarity=-0.008 Sum_probs=53.8
Q ss_pred EEEEEECCCCCHHH----HHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHC
Q ss_conf 49999588169899----99999999980998265453010387999988987653598299997267668511346522
Q gi|254780157|r 6 PVAIIMGSQSDWKI----MKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMT 81 (165)
Q Consensus 6 kV~Ii~GS~SD~~~----~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t 81 (165)
++++|.=. .+-|+ .+.+.+..+++|+...+ +......+++-.+.++++..++++.||....-...+...+....
T Consensus 6 ~i~~i~~~-~~npf~~~~~~G~~~aa~~~g~~~~~-~~~~~~d~~~q~~~i~~~i~~~vDgIii~~~d~~~~~~~l~~~~ 83 (303)
T 3d02_A 6 TVVNISKV-DGMPWFNRMGEGVVQAGKEFNLNASQ-VGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKKAR 83 (303)
T ss_dssp EEEEECSC-SSCHHHHHHHHHHHHHHHHTTEEEEE-ECCSSSCHHHHHHHHHHHHHTTCSEEEECCSCHHHHHHHHHHHH
T ss_pred EEEEEECC-CCCHHHHHHHHHHHHHHHHCCCEEEE-EECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 89999788-99869999999999999982998999-96899999999999999997599999995688377799999999
Q ss_pred --CCCEEEECCC
Q ss_conf --4203661257
Q gi|254780157|r 82 --SLPVLGVPII 91 (165)
Q Consensus 82 --~~PVIgVP~~ 91 (165)
..|||.+...
T Consensus 84 ~~gIpVv~~~~~ 95 (303)
T 3d02_A 84 DAGIVVLTNESP 95 (303)
T ss_dssp HTTCEEEEESCT
T ss_pred HCCCEEEEEEEE
T ss_conf 769879999630
No 157
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=43.10 E-value=18 Score=16.59 Aligned_cols=55 Identities=16% Similarity=0.345 Sum_probs=38.3
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 998874999958816989999999999980998265453010387999988987653598299997
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAG 66 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~ 66 (165)
|+|+|+|.|+ +.|....+-....|+..|+. +.. | .++++..+++++ ..++++|.=
T Consensus 1 Ms~~p~ILiV---DD~~~~~~~l~~~L~~~G~~--v~~--a-~~g~eal~~l~~---~~~dlvllD 55 (142)
T 2qxy_A 1 MSLTPTVMVV---DESRITFLAVKNALEKDGFN--VIW--A-KNEQEAFTFLRR---EKIDLVFVD 55 (142)
T ss_dssp --CCCEEEEE---CSCHHHHHHHHHHHGGGTCE--EEE--E-SSHHHHHHHHTT---SCCSEEEEE
T ss_pred CCCCCEEEEE---ECCHHHHHHHHHHHHHCCCE--EEE--E-CCHHHHHHHHHH---CCCCEEEEC
T ss_conf 9999969999---89899999999999987999--999--8-999999999985---799999854
No 158
>3pfk_A Phosphofructokinase; transferase(phosphotransferase); 2.40A {Geobacillus stearothermophilus} SCOP: c.89.1.1 PDB: 4pfk_A* 6pfk_A 1mto_A*
Probab=43.08 E-value=18 Score=16.59 Aligned_cols=87 Identities=15% Similarity=0.172 Sum_probs=51.1
Q ss_pred CEEEEEECCCCCHHHHHHHHHH----HHHCCCCE-------------EEE----------------EEEHHC-----CHH
Q ss_conf 7499995881698999999999----99809982-------------654----------------530103-----879
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADM----LDTLGIDY-------------EAR----------------IISAHR-----TPD 46 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~----L~~~gI~~-------------~~~----------------V~SAHR-----~p~ 46 (165)
+||+|+.++ -|-|.++.+..- +...|.+. ++. ...--| ..+
T Consensus 2 krIaIltsG-G~~pG~Na~i~~~v~~a~~~g~~v~g~~~G~~GL~~~~~~~l~~~~~~~~~~~gGs~lgssR~~~~~~~~ 80 (319)
T 3pfk_A 2 KRIGVLTSG-GDSPGMNAAIRSVVRKAIYHGVEVYGVYHGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEFKTEE 80 (319)
T ss_dssp CEEEEEEES-SCCTTHHHHHHHHHHHHHHTTCEEEEESSHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCGGGSSHH
T ss_pred CEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHH
T ss_conf 889998868-8757799999999999997799999984166976689952499898988985597500458888543212
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCC
Q ss_conf 9998898765359829999726766851134652242036612577
Q gi|254780157|r 47 RLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPVLGVPIIS 92 (165)
Q Consensus 47 ~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PVIgVP~~~ 92 (165)
...+..++.+..+++.+|.+-|-...-..-.-..--.||||+|-.-
T Consensus 81 ~~~~~~~~l~~~~Id~li~iGG~~s~~~a~~L~~~~~~vigiPkTI 126 (319)
T 3pfk_A 81 GQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEHGFPCVGVPGTI 126 (319)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEBCS
T ss_pred HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 6999999999715775999888589999999970698467330012
No 159
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=42.76 E-value=18 Score=16.56 Aligned_cols=86 Identities=15% Similarity=0.126 Sum_probs=53.1
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEH-----HCCHHHHHHHH----HHHHHCCCE-EEEEEECCCC
Q ss_conf 9887499995881698999999999998099826545301-----03879999889----876535982-9999726766
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISA-----HRTPDRLIEFA----KNARFEGFK-LIIAGAGGAA 71 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SA-----HR~p~~l~~~~----~~~~~~~~~-viIa~AG~aa 71 (165)
+.+..++|+=.+---+.+.++..+.|-. .++.+.-.++ .|+++++.++. +..+..+++ ++|||--.++
T Consensus 5 ~~~~pIgvfDSGiGGLtvl~~l~~~lP~--~~~iY~~D~a~~PYG~ks~eei~~~~~~~~~~L~~~~~~~IVIACNTaS~ 82 (276)
T 2dwu_A 5 HKHSVIGVLDSGVGGLTVASEIIRQLPK--ESICYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAAA 82 (276)
T ss_dssp CCCCEEEEEESSSTTHHHHHHHHHHCTT--SCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 6899489996897679999999997899--99899963899998999999999999999999985799999992671899
Q ss_pred CCHHHHHHHCCCCEEEEC
Q ss_conf 851134652242036612
Q gi|254780157|r 72 HLPGMIAAMTSLPVLGVP 89 (165)
Q Consensus 72 aLpgvva~~t~~PVIgVP 89 (165)
..-..+-.....|+||+-
T Consensus 83 ~al~~lr~~~~~piigvi 100 (276)
T 2dwu_A 83 ATLAALQEALSIPVIGVI 100 (276)
T ss_dssp HHHHHHHHHCSSCEEESH
T ss_pred HHHHHHHHCCCCCEEECC
T ss_conf 999999733798777346
No 160
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=41.97 E-value=19 Score=16.48 Aligned_cols=67 Identities=10% Similarity=0.107 Sum_probs=30.6
Q ss_pred HHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE-CCCCCCHH----HHHHHCCCCEEEECCC
Q ss_conf 9999999809982654530103879999889876535982999972-67668511----3465224203661257
Q gi|254780157|r 22 YAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGA-GGAAHLPG----MIAAMTSLPVLGVPII 91 (165)
Q Consensus 22 ~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A-G~aaaLpg----vva~~t~~PVIgVP~~ 91 (165)
...+..+..+++....+....+..+.+.++++ ..+++++|.+. |....+-| -+.-+++.||+-||..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~dliVvG~~~~~~~~~gs~~~~l~~~~~~pVlvv~~~ 139 (141)
T 1jmv_A 68 ALLDLAESVDYPISEKLSGSGDLGQVLSDAIE---QYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLR 139 (141)
T ss_dssp HHHHHHHHSSSCCCCEEEEEECHHHHHHHHHH---HTTCCEEEEEECCCCHHHHHHHHHHHHTTCCSEEEEEECC
T ss_pred HHHHHHHHCCCCEEEEEEEECCHHHHHHHHHH---HCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECC
T ss_conf 99999987177628999960674788999987---2788889993289998842729999986169999999169
No 161
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, fatty acid biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii}
Probab=41.30 E-value=19 Score=16.42 Aligned_cols=49 Identities=20% Similarity=0.331 Sum_probs=31.8
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHH
Q ss_conf 9988749999588169899999999999809982654530103879999889876
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~ 55 (165)
||.+-|+++|.|+.| -+...+++.|.+.|... +-..|+++++.+..++.
T Consensus 10 ~dL~gK~alVTGas~--GIG~aia~~la~~Ga~V----~i~~r~~~~l~~~~~~~ 58 (249)
T 3f9i_A 10 IDLTGKTSLITGASS--GIGSAIARLLHKLGSKV----IISGSNEEKLKSLGNAL 58 (249)
T ss_dssp CCCTTCEEEETTTTS--HHHHHHHHHHHHTTCEE----EEEESCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEE----EEEECCHHHHHHHHHHH
T ss_conf 767899899938787--89999999999879999----99979999999999985
No 162
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=41.26 E-value=19 Score=16.41 Aligned_cols=67 Identities=22% Similarity=0.253 Sum_probs=39.6
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHH-------------------------HCCCCEEEEEEEHHCCHHHHHHHHHHH
Q ss_conf 9988749999588169899999999999-------------------------809982654530103879999889876
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLD-------------------------TLGIDYEARIISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~-------------------------~~gI~~~~~V~SAHR~p~~l~~~~~~~ 55 (165)
|+++-||++|.|+.|. +...+++.|- .+|..+....+ =-+.++.+.++.++.
T Consensus 1 M~L~gk~alITGas~G--IG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~-Dv~~~~~v~~~~~~~ 77 (247)
T 2hq1_A 1 MQLKGKTAIVTGSSRG--LGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG-DVKNPEDVENMVKTA 77 (247)
T ss_dssp CTTTTCEEEESSCSSH--HHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEES-CTTSHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHH
T ss_conf 9989988999379868--9999999999879989999488367999999999854995899984-799999999999999
Q ss_pred HH--CCCEEEEEEECCC
Q ss_conf 53--5982999972676
Q gi|254780157|r 56 RF--EGFKLIIAGAGGA 70 (165)
Q Consensus 56 ~~--~~~~viIa~AG~a 70 (165)
.+ ..++++|-.||..
T Consensus 78 ~~~~G~iDilVnnAG~~ 94 (247)
T 2hq1_A 78 MDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHSCCCEEEECC---
T ss_pred HHHCCCCCEEEECCCCC
T ss_conf 99759998999899999
No 163
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=41.18 E-value=19 Score=16.40 Aligned_cols=81 Identities=10% Similarity=0.159 Sum_probs=54.8
Q ss_pred CCEEEEEECCCCC---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 8749999588169---8999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSD---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
+..|++++-+ +| ..+.+.+...+++.|+ .+.+..++..+++..++++++..++++.+|...-.+ ... .....
T Consensus 8 s~tIgvi~p~-~~pf~~~l~~gi~~~a~~~g~--~l~v~~~~~~~~~~~~~l~~l~~~~vdgiIi~~~~~-~~~-~~~~~ 82 (288)
T 2qu7_A 8 SNIIAFIVPD-QNPFFTEVLTEISHECQKHHL--HVAVASSEENEDKQQDLIETFVSQNVSAIILVPVKS-KFQ-MKREW 82 (288)
T ss_dssp EEEEEEEESS-CCHHHHHHHHHHHHHHGGGTC--EEEEEECTTCHHHHHHHHHHHHHTTEEEEEECCSSS-CCC-CCGGG
T ss_pred CCEEEEECCC-CCHHHHHHHHHHHHHHHHCCC--EEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCH-HHH-HHHHH
T ss_conf 9989999089-987999999999999998599--999997999989999999999966998899747412-679-99974
Q ss_pred CCCCEEEEC
Q ss_conf 242036612
Q gi|254780157|r 81 TSLPVLGVP 89 (165)
Q Consensus 81 t~~PVIgVP 89 (165)
...|||.+-
T Consensus 83 ~~iPvV~~~ 91 (288)
T 2qu7_A 83 LKIPIMTLD 91 (288)
T ss_dssp GGSCEEEES
T ss_pred CCCCEEEEE
T ss_conf 699889730
No 164
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=41.08 E-value=19 Score=16.39 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=46.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHC-CCCEEEEEEEHHCCH------------------------------HHHHHHHHH
Q ss_conf 4999958816989999999999980-998265453010387------------------------------999988987
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTL-GIDYEARIISAHRTP------------------------------DRLIEFAKN 54 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~-gI~~~~~V~SAHR~p------------------------------~~l~~~~~~ 54 (165)
||.++.|...|+-.+......|++- ++++.+-+.+.|... ..+..+.+.
T Consensus 2 Ki~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~ 81 (384)
T 1vgv_A 2 KVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPI 81 (384)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 39999973471999999999997389988899993898899999998629787745246889999999999999999999
Q ss_pred HHHCCCEEEEEEECCCCCCHHHHHH-HCCCCEEEE
Q ss_conf 6535982999972676685113465-224203661
Q gi|254780157|r 55 ARFEGFKLIIAGAGGAAHLPGMIAA-MTSLPVLGV 88 (165)
Q Consensus 55 ~~~~~~~viIa~AG~aaaLpgvva~-~t~~PVIgV 88 (165)
.+...++++++...+...|++++++ ....||+-+
T Consensus 82 l~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~Hi 116 (384)
T 1vgv_A 82 LAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHV 116 (384)
T ss_dssp HHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 98559998999689843766999999759978998
No 165
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondrial; NAD dependent deacetylase, sirtuin, substrate peptide complex, hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A
Probab=41.00 E-value=12 Score=17.82 Aligned_cols=28 Identities=14% Similarity=0.264 Sum_probs=12.7
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 87999988987653598299997267668
Q gi|254780157|r 44 TPDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 44 ~p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
+.+++.++++.-+.+ -.|++++||+|.+
T Consensus 10 ~l~~la~li~~~~~k-~ivvlTGAGISt~ 37 (285)
T 3glr_A 10 SLQDVAELIRARACQ-RVVVMVGAGISTP 37 (285)
T ss_dssp CHHHHHHHHHTTSCC-CEEEEECGGGTGG
T ss_pred CHHHHHHHHHHCCCC-EEEEEECCCHHHH
T ss_conf 899999999857999-6999938703041
No 166
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, human, structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=40.92 E-value=20 Score=16.38 Aligned_cols=67 Identities=13% Similarity=0.224 Sum_probs=35.9
Q ss_pred CCCEEEEEECCCCC----------------------HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH--C
Q ss_conf 88749999588169----------------------89999999999980998265453010387999988987653--5
Q gi|254780157|r 3 IAPPVAIIMGSQSD----------------------WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF--E 58 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD----------------------~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~--~ 58 (165)
.+=||++|.|+.|- ..-.++....|+.+|.......+ =-+.++.+.+.+++..+ .
T Consensus 29 l~GKvalITGas~GIG~a~A~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~g~~~~~~~~-Dvt~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV-DCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE-ECCCHHHHHHHHHHHHHHCC
T ss_conf 99988999385769999999999987998999989999999999999854993899997-27998999999999999729
Q ss_pred CCEEEEEEECCC
Q ss_conf 982999972676
Q gi|254780157|r 59 GFKLIIAGAGGA 70 (165)
Q Consensus 59 ~~~viIa~AG~a 70 (165)
.++++|..||..
T Consensus 108 ~iDilVnnAG~~ 119 (272)
T 1yb1_A 108 DVSILVNNAGVV 119 (272)
T ss_dssp CCSEEEECCCCC
T ss_pred CCEEEEECCCCC
T ss_conf 964999899777
No 167
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=40.84 E-value=20 Score=16.37 Aligned_cols=59 Identities=20% Similarity=0.276 Sum_probs=47.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 88169899999999999809982654530103879999889876535982999972676
Q gi|254780157|r 12 GSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGA 70 (165)
Q Consensus 12 GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~a 70 (165)
|+.+-....+-+....++.|++.-..+.+-.|+...+.+.+..+...|++=+.+..|=.
T Consensus 63 gg~~r~~t~~~a~~i~~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~ 121 (304)
T 3fst_A 63 NSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDL 121 (304)
T ss_dssp TSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 98565789999999999749985344447898999999999999983977076616888
No 168
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=40.49 E-value=20 Score=16.34 Aligned_cols=68 Identities=12% Similarity=0.085 Sum_probs=38.6
Q ss_pred CCCCC---EEEEEECCCCCHHHHHHHHHHHHHCCCCEE------------------------EE-EEEHHCCHHHHHHHH
Q ss_conf 99887---499995881698999999999998099826------------------------54-530103879999889
Q gi|254780157|r 1 MNIAP---PVAIIMGSQSDWKIMKYAADMLDTLGIDYE------------------------AR-IISAHRTPDRLIEFA 52 (165)
Q Consensus 1 m~~~p---kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~------------------------~~-V~SAHR~p~~l~~~~ 52 (165)
|+|+- ||++|.|+.|- +...++..|-+-|.... +. +..=-..++.+.+..
T Consensus 1 M~Mk~l~GKvalITGas~G--IG~a~a~~la~~Ga~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~ 78 (319)
T 3ioy_A 1 MSLKDFAGRTAFVTGGANG--VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAA 78 (319)
T ss_dssp --CCCCTTCEEEEETTTST--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
T ss_conf 9998889988999288878--99999999998799899998988999999999984078980899976689999999999
Q ss_pred HHHHH--CCCEEEEEEECCC
Q ss_conf 87653--5982999972676
Q gi|254780157|r 53 KNARF--EGFKLIIAGAGGA 70 (165)
Q Consensus 53 ~~~~~--~~~~viIa~AG~a 70 (165)
++..+ ..++++|..||..
T Consensus 79 ~~~~~~~G~iDiLvnNAGi~ 98 (319)
T 3ioy_A 79 DEVEARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHHHHHTCCEEEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
T ss_conf 99999749977899878646
No 169
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferase, sugar transport, phosphorylation; NMR {Escherichia coli K12} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=39.64 E-value=20 Score=16.25 Aligned_cols=77 Identities=9% Similarity=0.084 Sum_probs=51.7
Q ss_pred CEEEEEE-CCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCC
Q ss_conf 7499995-881698999999999998099826545301038799998898765359829999726766851134652242
Q gi|254780157|r 5 PPVAIIM-GSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSL 83 (165)
Q Consensus 5 pkV~Ii~-GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~ 83 (165)
.+|.+++ |+-|---.+++..+..++.|+++++.-.|..+.-+.+ + +++++..+-=..-...-+-.-....
T Consensus 4 k~IlL~C~~G~STs~l~~km~~~a~~~~~~~~i~A~~~~~~~~~~----~-----~~DviLL~PQv~~~~~~i~~~~~~~ 74 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKG----Q-----NADVVLLGPQIAYMLPEIQRLLPNK 74 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECSSSTTHHH----H-----HCSEEEECTTSGGGHHHHHHHSSSS
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHC----C-----CCCEEEECHHHHHHHHHHHHHCCCC
T ss_conf 889998489611999999999999987998899994078887524----7-----9979998688998899999880899
Q ss_pred CEEEECC
Q ss_conf 0366125
Q gi|254780157|r 84 PVLGVPI 90 (165)
Q Consensus 84 PVIgVP~ 90 (165)
||--.|+
T Consensus 75 pV~vI~~ 81 (106)
T 1e2b_A 75 PVEVIDS 81 (106)
T ss_dssp CCCBCCH
T ss_pred CEEEECH
T ss_conf 9898786
No 170
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=39.00 E-value=21 Score=16.19 Aligned_cols=70 Identities=14% Similarity=0.167 Sum_probs=36.6
Q ss_pred CCCCCE-EEEEECCCC-----CHH-------HHHHHHHHHHHCCCCEEEEE-EEHHCCHHHHHHHHHHHHHCCC--EEEE
Q ss_conf 998874-999958816-----989-------99999999998099826545-3010387999988987653598--2999
Q gi|254780157|r 1 MNIAPP-VAIIMGSQS-----DWK-------IMKYAADMLDTLGIDYEARI-ISAHRTPDRLIEFAKNARFEGF--KLII 64 (165)
Q Consensus 1 m~~~pk-V~Ii~GS~S-----D~~-------~~~~a~~~L~~~gI~~~~~V-~SAHR~p~~l~~~~~~~~~~~~--~viI 64 (165)
|+..|+ +++|.+-.. +++ =++....+|+++|.+..+.. .+.-..-+.+.++.+....... -+++
T Consensus 16 m~~~prG~aLIInn~~f~~~~~l~~R~Ga~~Da~~l~~~l~~lGF~V~~~~nlt~~~m~~~l~~~~~~~~~~~d~~vv~~ 95 (277)
T 1nw9_B 16 LSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVI 95 (277)
T ss_dssp CCCSSCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHHSCCTTCSEEEEEE
T ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 69986549999856456887789999983999999999998889989993288999999999997542046787799999
Q ss_pred EEECCC
Q ss_conf 972676
Q gi|254780157|r 65 AGAGGA 70 (165)
Q Consensus 65 a~AG~a 70 (165)
.+-|..
T Consensus 96 ~gHG~~ 101 (277)
T 1nw9_B 96 LSHGCQ 101 (277)
T ss_dssp EEEEEC
T ss_pred ECCCCC
T ss_conf 567645
No 171
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=38.69 E-value=21 Score=16.16 Aligned_cols=83 Identities=6% Similarity=0.079 Sum_probs=55.0
Q ss_pred CCEEEEEECCCCC---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHH-HH
Q ss_conf 8749999588169---8999999999998099826545301038799998898765359829999726766851134-65
Q gi|254780157|r 4 APPVAIIMGSQSD---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMI-AA 79 (165)
Q Consensus 4 ~pkV~Ii~GS~SD---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvv-a~ 79 (165)
+..|++|+-+.++ ..+...+.+.+++.|. .+.+...+-.++...++.+.....+++.+|..... ....-.. .-
T Consensus 15 s~~Igvi~p~~~~~f~~~ll~~i~~~a~~~gy--~l~l~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~-~~~~~~~~~~ 91 (303)
T 3kke_A 15 SGTIGLIVPDVNNAVFADMFSGVQMAASGHST--DVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRRE-DFDDDMLAAV 91 (303)
T ss_dssp --CEEEEESCTTSTTHHHHHHHHHHHHHHTTC--CEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCT-TCCHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHH
T ss_conf 99899996999877999999999999997699--89999589997999999999995897889840346-7639999999
Q ss_pred HCCCCEEEEC
Q ss_conf 2242036612
Q gi|254780157|r 80 MTSLPVLGVP 89 (165)
Q Consensus 80 ~t~~PVIgVP 89 (165)
....||+-+-
T Consensus 92 ~~~iPvV~~d 101 (303)
T 3kke_A 92 LEGVPAVTIN 101 (303)
T ss_dssp HTTSCEEEES
T ss_pred HCCCCEEEEC
T ss_conf 7599889971
No 172
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=38.53 E-value=21 Score=16.14 Aligned_cols=81 Identities=11% Similarity=0.041 Sum_probs=51.5
Q ss_pred CCEEEEEECCCCC---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 8749999588169---8999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSD---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
+..|+++.-+-++ -.+.+.+...+++.| |.+-+...+..++...++++....++++-+|...-.....--. ..
T Consensus 2 ~k~Igvi~p~~~~~~~~~~~~~i~~~~~~~g--y~~~i~~~~~~~~~~~~~l~~l~~~~vdgiI~~~~~~~~~~~~--~~ 77 (255)
T 1byk_A 2 DKVVAIIVTRLDSLSENLAVQTMLPAFYEQG--YDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEML--AH 77 (255)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHHT--CEEEEEECTTCHHHHHHHHHHHHTTTCCEEEEECCTTCCTTTS--GG
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH--HH
T ss_conf 9899999699889899999999999999859--9899994899989999999999956998999858996569999--97
Q ss_pred CCCCEEEE
Q ss_conf 24203661
Q gi|254780157|r 81 TSLPVLGV 88 (165)
Q Consensus 81 t~~PVIgV 88 (165)
...|+|-+
T Consensus 78 ~~~p~v~i 85 (255)
T 1byk_A 78 WQSSLVLL 85 (255)
T ss_dssp GSSSEEEE
T ss_pred CCCCEEEE
T ss_conf 79998999
No 173
>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*
Probab=38.27 E-value=21 Score=16.12 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=31.9
Q ss_pred EECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHH
Q ss_conf 95881698999999999998099826545301038799998
Q gi|254780157|r 10 IMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIE 50 (165)
Q Consensus 10 i~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~ 50 (165)
+.|+. .-|.+.++...|++.|++|+.........++++.+
T Consensus 5 Lyg~~-~SP~~~rvri~L~e~gl~~e~~~v~~~~~~~~~~~ 44 (213)
T 3m0f_A 5 LIGML-DSPYVRRVAISLKSLGLPFEHHSLSVFSTFEQFKA 44 (213)
T ss_dssp EESCT-TSHHHHHHHHHHHHHTCCCEEECCCTTTTHHHHHH
T ss_pred EECCC-CCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
T ss_conf 95289-99889999999999299888998278889899998
No 174
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A
Probab=38.04 E-value=22 Score=16.09 Aligned_cols=41 Identities=10% Similarity=0.196 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHCCCEE-EEEEECCCCCCHHHHHHHCCCCEEEECC
Q ss_conf 8799998898765359829-9997267668511346522420366125
Q gi|254780157|r 44 TPDRLIEFAKNARFEGFKL-IIAGAGGAAHLPGMIAAMTSLPVLGVPI 90 (165)
Q Consensus 44 ~p~~l~~~~~~~~~~~~~v-iIa~AG~aaaLpgvva~~t~~PVIgVP~ 90 (165)
+|..+.++.+ .++ |..+.|++.-+.-++..+-..+++.+.-
T Consensus 39 ~p~d~~~l~~------Adlvv~~G~~~E~~~~~~~~~~~~~~~~~~~~ 80 (284)
T 2prs_A 39 RPSDVKRLQN------ADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQ 80 (284)
T ss_dssp CTTHHHHHHH------CSEEEECCTTTCGGGHHHHHTSCGGGEEEGGG
T ss_pred CHHHHHHHHC------CCEEEECCCCHHHHHHHHHHHCCCCCCEEEEC
T ss_conf 9999999966------99999948541778999998575776223210
No 175
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, cytoplasm, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=37.89 E-value=22 Score=16.08 Aligned_cols=91 Identities=13% Similarity=0.095 Sum_probs=51.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHH-HHH--HHHH-----------HHCCCEEEEEE-E
Q ss_conf 8874999958816989999999999980998265453010387999-988--9876-----------53598299997-2
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRL-IEF--AKNA-----------RFEGFKLIIAG-A 67 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l-~~~--~~~~-----------~~~~~~viIa~-A 67 (165)
..|+|+|++|+-..=--+=-++..|...|+.+.+.+...-+..+.+ .++ .+.. ....++++|-+ -
T Consensus 131 ~~P~VlVlcG~GnNGgDGla~AR~L~~~G~~V~v~l~~~~~~~~~~~~q~~l~~~~~~~~v~~~~~l~~~~~DlIIDaL~ 210 (306)
T 3d3j_A 131 QRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPTSPVDLVINCLD 210 (306)
T ss_dssp CCCEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCCHHHHHHHHHHHTSSCEEESCSTTSCSSCCSEEEEECC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEE
T ss_conf 89869999899998099999999999689969999578765899999999999865895841510046677768999203
Q ss_pred CCCCCC---HH----HHH--HHCCCCEEEECCCCC
Q ss_conf 676685---11----346--522420366125776
Q gi|254780157|r 68 GGAAHL---PG----MIA--AMTSLPVLGVPIISQ 93 (165)
Q Consensus 68 G~aaaL---pg----vva--~~t~~PVIgVP~~~~ 93 (165)
|...+. .+ ++. -....||++|=+++|
T Consensus 211 G~g~~~~~~~~~~~~li~~iN~~~a~VlSiDiPSG 245 (306)
T 3d3j_A 211 CPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPVH 245 (306)
T ss_dssp CTTCGGGGGCHHHHHHHHHHHHSCCCEEEESCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 36567777629999999999846998799858998
No 176
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=37.79 E-value=21 Score=16.22 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=27.2
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 874999958816989999999999980998265453
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARII 39 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~ 39 (165)
+++|.|. |.++=|++.++...|++.||+|+..-+
T Consensus 21 ~~kV~iY--s~~~Cp~C~~aK~~L~~~gI~y~~idI 54 (103)
T 3nzn_A 21 RGKVIMY--GLSTCVWCKKTKKLLTDLGVDFDYVYV 54 (103)
T ss_dssp CSCEEEE--ECSSCHHHHHHHHHHHHHTBCEEEEEG
T ss_pred CCEEEEE--ECCCCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 8879999--389897699999999975998789999
No 177
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=37.42 E-value=22 Score=16.03 Aligned_cols=66 Identities=15% Similarity=0.184 Sum_probs=38.1
Q ss_pred CCEEEEEE-CCCCCH-HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH-CCCEEEEEEECC
Q ss_conf 87499995-881698-9999999999980998265453010387999988987653-598299997267
Q gi|254780157|r 4 APPVAIIM-GSQSDW-KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF-EGFKLIIAGAGG 69 (165)
Q Consensus 4 ~pkV~Ii~-GS~SD~-~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~-~~~~viIa~AG~ 69 (165)
+|+.+||. |.+.+- -+.+.-.+..+++||+|+.......-+.+++.+.+++... ...+-|+.--=.
T Consensus 33 ~P~LaiIlvgdd~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPL 101 (285)
T 3p2o_A 33 ESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPL 101 (285)
T ss_dssp CCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCC
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 983799996998778999999999984367438998415667789999999987335762179985589
No 178
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron transport, structural genomics; NMR {Bartonella henselae str}
Probab=37.30 E-value=22 Score=16.02 Aligned_cols=74 Identities=20% Similarity=0.327 Sum_probs=46.0
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHC
Q ss_conf 98874999958816989999999999980998265453010387999988987653598299997267668511346522
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMT 81 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t 81 (165)
+|+ +|.|. |+++=|+..++...|++.||+|+..-.+ ++...++.+.. .+..
T Consensus 4 ~Mk-kVviY--s~~~Cp~C~~ak~~L~~~~i~y~eid~~----~~~~~~~~~~~----------------------~g~~ 54 (89)
T 2klx_A 4 SMK-EIILY--TRPNCPYCKRARDLLDKKGVKYTDIDAS----TSLRQEMVQRA----------------------NGRN 54 (89)
T ss_dssp CCC-CEEEE--SCSCCTTTHHHHHHHHHHTCCEEEECSC----HHHHHHHHHHH----------------------HSSC
T ss_pred CCC-EEEEE--ECCCCHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHHHHH----------------------CCCC
T ss_conf 886-69999--8999977999999999869977999866----88899999997----------------------5998
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 4203661257766675001699840
Q gi|254780157|r 82 SLPVLGVPIISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 82 ~~PVIgVP~~~~~~~G~dallS~vq 106 (165)
+.|+|=+ .+..++|.|-|..+.+
T Consensus 55 tvP~i~i--~g~~iGG~~el~~l~~ 77 (89)
T 2klx_A 55 TFPQIFI--GDYHVGGCDDLYALEN 77 (89)
T ss_dssp CSCEEEE--TTEECCSHHHHHHHHH
T ss_pred CCCEEEE--CCEEEECHHHHHHHHH
T ss_conf 7595999--9999837899999998
No 179
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=36.87 E-value=23 Score=15.97 Aligned_cols=65 Identities=22% Similarity=0.189 Sum_probs=37.3
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCE------------------------------------EEEEEEHHCCHH
Q ss_conf 88749999588169899999999999809982------------------------------------654530103879
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDY------------------------------------EARIISAHRTPD 46 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~------------------------------------~~~V~SAHR~p~ 46 (165)
.+-||++|.|+.+- +...+++.|-+.|... ....+- -..++
T Consensus 44 L~GKvalVTGas~G--IG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D-vt~~~ 120 (317)
T 3oec_A 44 LQGKVAFITGAARG--QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQAD-VRDLA 120 (317)
T ss_dssp TTTCEEEESSCSSH--HHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECC-TTCHH
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECC-CCCHH
T ss_conf 59987999287868--9999999999879989998375211002231048999999999999729818999834-89999
Q ss_pred HHHHHHHHHHH--CCCEEEEEEECCC
Q ss_conf 99988987653--5982999972676
Q gi|254780157|r 47 RLIEFAKNARF--EGFKLIIAGAGGA 70 (165)
Q Consensus 47 ~l~~~~~~~~~--~~~~viIa~AG~a 70 (165)
.+.++++...+ ..++++|..||..
T Consensus 121 ~v~~~~~~~~~~~G~iDiLVnnAG~~ 146 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 99999999999759997899899999
No 180
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 1mg5_A*
Probab=36.79 E-value=23 Score=15.97 Aligned_cols=67 Identities=13% Similarity=0.063 Sum_probs=41.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE-------------------------EEEHHCCHHHHHHHHHHH
Q ss_conf 9988749999588169899999999999809982654-------------------------530103879999889876
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR-------------------------IISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~-------------------------V~SAHR~p~~l~~~~~~~ 55 (165)
|+++-|+++|.|+.| -+...+++.|-+.|....+- .+-.-...+.+.++++..
T Consensus 1 MdL~gK~~lITGas~--GIG~aiA~~la~~Ga~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 1 MDLTNKNVIFVAALG--GIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTS--HHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH
T ss_conf 988999999953888--899999999998799799997885568999999961789986999932489899999999999
Q ss_pred HH--CCCEEEEEEECC
Q ss_conf 53--598299997267
Q gi|254780157|r 56 RF--EGFKLIIAGAGG 69 (165)
Q Consensus 56 ~~--~~~~viIa~AG~ 69 (165)
.+ ..++++|..||.
T Consensus 79 ~~~~g~iDiLVnNAG~ 94 (254)
T 1sby_A 79 FDQLKTVDILINGAGI 94 (254)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHCCCCCEEECCCCC
T ss_conf 9982997789717888
No 181
>2pfs_A USP, universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.25A {Nitrosomonas europaea atcc 19718}
Probab=36.67 E-value=23 Score=15.95 Aligned_cols=41 Identities=24% Similarity=0.324 Sum_probs=16.9
Q ss_pred HHHHHHHCCCEEEEEEECCCCCC-------HHHHHHHCCCCEEEECCC
Q ss_conf 89876535982999972676685-------113465224203661257
Q gi|254780157|r 51 FAKNARFEGFKLIIAGAGGAAHL-------PGMIAAMTSLPVLGVPII 91 (165)
Q Consensus 51 ~~~~~~~~~~~viIa~AG~aaaL-------pgvva~~t~~PVIgVP~~ 91 (165)
+++.....+++.+|.+.-....+ ..-+.-+++.||+-||+.
T Consensus 101 I~~~a~~~~~dliV~G~~~~~~~~~~lGS~~~~v~~~s~~pVlvV~~~ 148 (150)
T 2pfs_A 101 IIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVLAVRLR 148 (150)
T ss_dssp HHHHHHHTTCSEEEEEEC----------CHHHHHHHHCSSEEEEEEC-
T ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEECCC
T ss_conf 999998638767987279999652651778999985369899998369
No 182
>3afn_B A1-R, 4-deoxy-L-erythro-5-hexoseulose-uronic acid reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=36.53 E-value=23 Score=15.94 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=37.0
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE------------------------EEEHHCCHHHHHHHHHHHHH
Q ss_conf 988749999588169899999999999809982654------------------------53010387999988987653
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR------------------------IISAHRTPDRLIEFAKNARF 57 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~------------------------V~SAHR~p~~l~~~~~~~~~ 57 (165)
|.+-||++|.|+.| -+...+++.|-+.|....+. +..=-+.++.+.++.++..+
T Consensus 4 dL~gK~alVTGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (258)
T 3afn_B 4 DLKGKRVLITGSSQ--GIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA 81 (258)
T ss_dssp GGTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 88998799937985--9999999999987999999979844219999999996299689998138999999999999999
Q ss_pred --CCCEEEEEEECCC
Q ss_conf --5982999972676
Q gi|254780157|r 58 --EGFKLIIAGAGGA 70 (165)
Q Consensus 58 --~~~~viIa~AG~a 70 (165)
.+++++|-.||..
T Consensus 82 ~~G~iDiLVnnAg~~ 96 (258)
T 3afn_B 82 KFGGIDVLINNAGGL 96 (258)
T ss_dssp HHSSCSEEEECCCCC
T ss_pred HHCCCCEEEECCCCC
T ss_conf 859987999899764
No 183
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural genomics, PSI-2; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum atcc 13032}
Probab=36.07 E-value=23 Score=15.89 Aligned_cols=117 Identities=16% Similarity=0.131 Sum_probs=57.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCC---EEEEE------EEHHCCHHHH-HHHHHHHHHCCCEEEEEEECCCCCCHH
Q ss_conf 4999958816989999999999980998---26545------3010387999-988987653598299997267668511
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGID---YEARI------ISAHRTPDRL-IEFAKNARFEGFKLIIAGAGGAAHLPG 75 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~---~~~~V------~SAHR~p~~l-~~~~~~~~~~~~~viIa~AG~aaaLpg 75 (165)
+++|+.-|++|+|. ..+++++|. ..+.+ .|.- ++.++ ..|.+..+..+++
T Consensus 5 ~IaIvtDSs~dl~~-----~~~~~~~I~vvPl~i~~dg~~~~ts~~-~~~~~~~~~~~~l~~~g~d-------------- 64 (277)
T 3egl_A 5 PVRVIVDSSACLPT-----HVAEDLDITVINLHVMNNGEERSTSGL-SSLELAASYARQLERGGDD-------------- 64 (277)
T ss_dssp CCEEEEEGGGCCCH-----HHHHHTTEEEECCEEEECSSCEEEECC-CHHHHHHHHHHHHHHTTTS--------------
T ss_pred CEEEEEECCCCCCH-----HHHHHCCCEEEEEEEEECCEEECCCCC-CHHHHHHHHHHHHHHCCCC--------------
T ss_conf 88999978889999-----999878948997999999998147899-9799999999999857998--------------
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHH---HHHHHHHHHH--CCCHHHHHHHHHHHH
Q ss_conf 34652242036612577666750016998403569862044316753122---8999999970--699999999999999
Q gi|254780157|r 76 MIAAMTSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAIN---ASLLAVAILA--LDDKELTDRLNEWRT 150 (165)
Q Consensus 76 vva~~t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~N---Aal~A~~Il~--~~d~~i~~kl~~~r~ 150 (165)
.||.++++++-.+-..+.....+|-++..+-.+.- ...... .++.|++++. .+-+++.+.+.++++
T Consensus 65 --------~ii~i~iSs~LSgty~~a~~aa~~~~~~~I~ViDS-~~~s~~~g~lv~~a~~l~~~G~s~~ei~~~l~~~~~ 135 (277)
T 3egl_A 65 --------GVLALHISXELSSTWSAAVTAAAVFDDDSVRVVDT-SSLGMAVGAAAMAAARMAXDGASLQECYDIAVDTLX 135 (277)
T ss_dssp --------CEEEECSCTTTCSHHHHHHHHHTTSSTTSEEEECC-SCCTHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred --------CEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECC-CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf --------18999847327489999999985468996999768-523499999999999976639999999999999885
Q ss_pred H
Q ss_conf 9
Q gi|254780157|r 151 Q 151 (165)
Q Consensus 151 ~ 151 (165)
+
T Consensus 136 ~ 136 (277)
T 3egl_A 136 R 136 (277)
T ss_dssp T
T ss_pred H
T ss_conf 2
No 184
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=35.80 E-value=23 Score=15.87 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=13.6
Q ss_pred EEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCH
Q ss_conf 5301038799998898765359829999726766851
Q gi|254780157|r 38 IISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLP 74 (165)
Q Consensus 38 V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLp 74 (165)
|.+.|+....+.++.+ ..+++|+++|...-+.
T Consensus 192 Vt~~hs~t~~l~~~~~-----~ADIvisa~G~~~~i~ 223 (301)
T 1a4i_A 192 VTTCHSKTAHLDEEVN-----KGDILVVATGQPEMVK 223 (301)
T ss_dssp EEEECTTCSSHHHHHT-----TCSEEEECCCCTTCBC
T ss_pred EEEEECCCCHHHHHCC-----CCCEEEECCCCCCCCC
T ss_conf 9998589850043044-----5778861358865333
No 185
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=35.65 E-value=20 Score=16.26 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=49.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEH-----HCCHHHHHHH----HHHHHHCCCE-EEEEEECCCCCCHH
Q ss_conf 499995881698999999999998099826545301-----0387999988----9876535982-99997267668511
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISA-----HRTPDRLIEF----AKNARFEGFK-LIIAGAGGAAHLPG 75 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SA-----HR~p~~l~~~----~~~~~~~~~~-viIa~AG~aaaLpg 75 (165)
|++|+=.+---+.+.++..+.|- +.++.+.-.++ .|+++++.++ ++..+..+++ ++|||--.++..-.
T Consensus 2 kIgvfDSGiGGlsvl~~l~~~lp--~~~~iY~~D~a~~PYG~ks~~~i~~~~~~~~~~l~~~~~~~IVIACNTasa~al~ 79 (255)
T 2jfz_A 2 KIGVFDSGVGGFSVLKSLLKARL--FDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALE 79 (255)
T ss_dssp EEEEEESSSTTHHHHHHHHHTTC--CSEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHHHHTHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCC--CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
T ss_conf 89999289767999999998789--9998999447899989899999999999999999973999899757689897569
Q ss_pred HHHHHCCCCEEEECC
Q ss_conf 346522420366125
Q gi|254780157|r 76 MIAAMTSLPVLGVPI 90 (165)
Q Consensus 76 vva~~t~~PVIgVP~ 90 (165)
.+-.....|+||+-+
T Consensus 80 ~lr~~~~ipiigvi~ 94 (255)
T 2jfz_A 80 EMQKYSKIPIVGVIE 94 (255)
T ss_dssp HHHHHCSSCEECSSH
T ss_pred HHHHCCCCCEEECCC
T ss_conf 988446886676763
No 186
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A*
Probab=35.46 E-value=24 Score=15.83 Aligned_cols=62 Identities=11% Similarity=0.232 Sum_probs=37.5
Q ss_pred EEEEE-CCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH----HC
Q ss_conf 99995-88169899999999999809982654530103879999889876535982999972676685113465----22
Q gi|254780157|r 7 VAIIM-GSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA----MT 81 (165)
Q Consensus 7 V~Ii~-GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~----~t 81 (165)
..|+. +......+.++..+.|++++++|+. ++++++|+. |+.+.+-.+.-- ..
T Consensus 3 ~~i~~~~~~~s~~i~~~i~~~l~~~~~~~d~---------------------~~~Dlvi~i-GGDGT~L~a~~~~~~~~~ 60 (272)
T 2i2c_A 3 YMITSKGDEKSDLLRLNMIAGFGEYDMEYDD---------------------VEPEIVISI-GGDGTFLSAFHQYEERLD 60 (272)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTSSCEECS---------------------SSCSEEEEE-ESHHHHHHHHHHTGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHCCCCCCC---------------------CCCCEEEEE-CCHHHHHHHHHHHHHCCC
T ss_conf 9999089989999999999998766972268---------------------899999998-970999999998763179
Q ss_pred CCCEEEECC
Q ss_conf 420366125
Q gi|254780157|r 82 SLPVLGVPI 90 (165)
Q Consensus 82 ~~PVIgVP~ 90 (165)
..||+|+-+
T Consensus 61 ~~PvlGin~ 69 (272)
T 2i2c_A 61 EIAFIGIHT 69 (272)
T ss_dssp TCEEEEEES
T ss_pred CCEEEEEEC
T ss_conf 982999825
No 187
>1sq1_A Chorismate synthase; structural genomics, bifunctional alpha/beta tetrameric protein, PSI, protein structure initiative; 2.80A {Campylobacter jejuni} SCOP: d.258.1.1
Probab=35.23 E-value=24 Score=15.81 Aligned_cols=88 Identities=23% Similarity=0.145 Sum_probs=49.4
Q ss_pred HHHHHHHHCCCCEEEEEEEH---------------------HCCH-----HHHHHHHHHHHHCCCEEEEEEECCCCCCHH
Q ss_conf 99999998099826545301---------------------0387-----999988987653598299997267668511
Q gi|254780157|r 22 YAADMLDTLGIDYEARIISA---------------------HRTP-----DRLIEFAKNARFEGFKLIIAGAGGAAHLPG 75 (165)
Q Consensus 22 ~a~~~L~~~gI~~~~~V~SA---------------------HR~p-----~~l~~~~~~~~~~~~~viIa~AG~aaaLpg 75 (165)
=|.+.|+++||....+|.+. -|.| +++.+.++++..++. .|.|
T Consensus 137 iAk~lL~~~gi~i~s~v~~iG~i~~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~ar~~gD-----------SlGG 205 (370)
T 1sq1_A 137 VAAMLLREFDICVQSGVFGVGTFVSNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKD-----------SVGA 205 (370)
T ss_dssp HHHHHHHTTTCEEEEEEEEETTEECCSCGGGSCHHHHHHSTTCBSCTTTHHHHHHHHHHHHHTTC-----------CCCE
T ss_pred HHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC-----------CCCC
T ss_conf 99999986283488999998546424677757999996345668998999999999999973478-----------8783
Q ss_pred HHHHHCCCCEEEECCCCCC--CCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHH
Q ss_conf 3465224203661257766--675001699840356986204431675312289
Q gi|254780157|r 76 MIAAMTSLPVLGVPIISQT--LGGIDSLLSIVQMPAGVPVGTMAIGQSGAINAS 127 (165)
Q Consensus 76 vva~~t~~PVIgVP~~~~~--~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAa 127 (165)
-...=+.|||+--|. ++.+|+.|+-.-| ++| ++-+|-.+.||+++
T Consensus 206 ----vve~~~~gvP~GLG~p~fdkLda~LA~a~m--SIp-AvKgvEfG~GF~~a 252 (370)
T 1sq1_A 206 ----AVFTKVSGMLIGLGEVLYDKLDSKLAHALM--GIN-AVKAVEIGEGINAS 252 (370)
T ss_dssp ----EEEEEEESCCBSCSBTTTBCHHHHHHHHHH--TST-TEEEEEETTGGGGG
T ss_pred ----EEEEEEECCCCCCCCCCCCCHHHHHHHHHH--CCC-CEEEEEECCCEEEE
T ss_conf ----899998469987789866750699999872--665-44789964770311
No 188
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=34.98 E-value=24 Score=15.78 Aligned_cols=47 Identities=21% Similarity=0.271 Sum_probs=27.7
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHH
Q ss_conf 98874999958816989999999999980998265453010387999988987
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKN 54 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~ 54 (165)
|++-||++|.|+.+ -+...+++.|-+.|.. + +-..|+.+++.+..++
T Consensus 5 ~L~gKvalVTGgs~--GIG~aia~~la~~Ga~--V--~i~~r~~~~l~~~~~~ 51 (265)
T 3lf2_A 5 DLSEAVAVVTGGSS--GIGLATVELLLEAGAA--V--AFCARDGERLRAAESA 51 (265)
T ss_dssp CCTTCEEEEETCSS--HHHHHHHHHHHHTTCE--E--EEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCE--E--EEEECCHHHHHHHHHH
T ss_conf 99999899948786--9999999999987998--9--9997988999999999
No 189
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, structural genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=34.90 E-value=24 Score=15.77 Aligned_cols=115 Identities=15% Similarity=0.147 Sum_probs=57.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCC
Q ss_conf 88749999588169899999999999809982654530103879999889876535982999972676685113465224
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTS 82 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~ 82 (165)
|+|||.|. .+++ ++..+.|++. +++.+....+...+ .++.+.. .+++++|+. +..---.-++.....
T Consensus 1 MKpKILvt----~~l~--~~~l~~L~~~---~ev~v~~~~~~~~~-e~l~~~l--~~~dali~~-~~~~i~~e~l~~~p~ 67 (334)
T 2dbq_A 1 MKPKVFIT----REIP--EVGIKMLEDE---FEVEVWGDEKEIPR-EILLKKV--KEVDALVTM-LSERIDKEVFENAPK 67 (334)
T ss_dssp CCCEEEES----SCCC--HHHHHHHHTT---SEEEECCCSSCCCH-HHHHHHT--TSCSEEEEC-TTSCBCHHHHHTCTT
T ss_pred CCCEEEEE----CCCC--HHHHHHHHCC---CCEEEECCCCCCCH-HHHHHHH--CCCEEEEEC-CCCCCCHHHHHCCCC
T ss_conf 98789995----9899--9999998668---92999379988999-9999984--898399987-899989999944999
Q ss_pred CCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 203661257766675001699840356986204431675312289999999706
Q gi|254780157|r 83 LPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL 136 (165)
Q Consensus 83 ~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~ 136 (165)
+-+|..+.. | .+.+| +- .-...|+++... -|....-=|-+.-+.||++
T Consensus 68 LK~I~~~~~-G-~d~id-~~--~~~~~~I~v~n~-~g~~~~~VAE~~l~~iL~l 115 (334)
T 2dbq_A 68 LRIVANYAV-G-YDNID-IE--EATKRGIYVTNT-PDVLTDATADLAFALLLAT 115 (334)
T ss_dssp CCEEEESSS-C-CTTBC-HH--HHHHTTCEEECC-CSTTHHHHHHHHHHHHHHH
T ss_pred CCEEEECCC-C-CCCCC-HH--HHHHCCCCEECC-CCCCCHHHHHHHHHHHHHH
T ss_conf 839998886-4-45006-89--998669653328-9877404489999999998
No 190
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=34.82 E-value=24 Score=15.77 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=39.9
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE---------------------EEEEHHCCHHHHHHHHHHHHH-CC
Q ss_conf 98874999958816989999999999980998265---------------------453010387999988987653-59
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEA---------------------RIISAHRTPDRLIEFAKNARF-EG 59 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~---------------------~V~SAHR~p~~l~~~~~~~~~-~~ 59 (165)
+.+-||++|.|+.+ -+...+++.|.+.|....+ .+..=-+.++.+.++.++.+. ..
T Consensus 8 ~L~gKvalVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~v~~~g~ 85 (254)
T 2wsb_A 8 RLDGACAAVTGAGS--GIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAP 85 (254)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf 99999899948887--8999999999987999999979889999999984788568999748999999999999996699
Q ss_pred CEEEEEEECCC
Q ss_conf 82999972676
Q gi|254780157|r 60 FKLIIAGAGGA 70 (165)
Q Consensus 60 ~~viIa~AG~a 70 (165)
++++|..||..
T Consensus 86 iDilVnnAG~~ 96 (254)
T 2wsb_A 86 VSILVNSAGIA 96 (254)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
T ss_conf 98999899889
No 191
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, serine metabolism; HET: NAD; 1.70A {Homo sapiens}
Probab=34.73 E-value=24 Score=15.76 Aligned_cols=127 Identities=17% Similarity=0.157 Sum_probs=69.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 99887499995881698999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
|...+||.|. .+- -+.+.+.|++.|+++...-. .+++++.+.+ .+++++|+ .+...--..++...
T Consensus 23 ~~~~~kvLi~-~~~-----~~~~~~~L~~~g~ev~~~~~---~~~eel~~~~-----~d~d~li~-~~~~~i~~~vl~~~ 87 (335)
T 2g76_A 23 MANLRKVLIS-DSL-----DPCCRKILQDGGLQVVEKQN---LSKEELIAEL-----QDCEGLIV-RSATKVTADVINAA 87 (335)
T ss_dssp ---CCEEEEC-SCC-----CHHHHHHHHHHTCEEEECCS---CCHHHHHHHG-----GGCSEEEE-CSSSCBCHHHHHHC
T ss_pred HCCCCEEEEE-CCC-----CHHHHHHHHHCCCEEEECCC---CCHHHHHHHH-----CCCCEEEE-CCCCCCCHHHHHCC
T ss_conf 7068769991-799-----98999999978989997999---8999999983-----89849998-68988799999319
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 2420366125776667500169984035698620443167531228999999970699999999999999999
Q gi|254780157|r 81 TSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILALDDKELTDRLNEWRTQQT 153 (165)
Q Consensus 81 t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~~d~~i~~kl~~~r~~~~ 153 (165)
..+-+|+.+-. | .+.+| +-.. -..|++|..+. +....--|-+.-..||++ ..++..+.+.++
T Consensus 88 ~~LK~I~~~g~-G-~D~iD-~~~a--~~~gI~v~n~p-~~~~~~VAE~~i~~iL~l-----~R~i~~~~~~~~ 149 (335)
T 2g76_A 88 EKLQVVGRAGT-G-VDNVD-LEAA--TRKGILVMNTP-NGNSLSAAELTCGMIMCL-----ARQIPQATASMK 149 (335)
T ss_dssp SSCCEEEESSS-S-CTTBC-HHHH--HHHTCEEECCS-STTHHHHHHHHHHHHHHH-----HHTHHHHHHHHH
T ss_pred CCCEEEEECCC-C-CCCCC-HHHH--HHCCEEEECCC-CCCCHHHHHHHHHHHHHH-----HHCHHHHHHHHH
T ss_conf 99769996685-4-56266-9999--86790574279-876314799999999999-----616799999998
No 192
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=34.69 E-value=24 Score=15.75 Aligned_cols=68 Identities=16% Similarity=0.174 Sum_probs=47.8
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE------------EEEHHCCHHHHHHHHHHHHH--CCCEEEEEEE
Q ss_conf 988749999588169899999999999809982654------------53010387999988987653--5982999972
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR------------IISAHRTPDRLIEFAKNARF--EGFKLIIAGA 67 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~------------V~SAHR~p~~l~~~~~~~~~--~~~~viIa~A 67 (165)
|++-||++|.|+.| -+...+++.|.+-|....+. +..=-+.++.+.++.++..+ ..++++|-.|
T Consensus 5 dL~gKvalITG~s~--GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnA 82 (264)
T 2dtx_A 5 DLRDKVVIVTGASM--GIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA 82 (264)
T ss_dssp GGTTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 88999899938986--8999999999987999999848975568842999827999999999999999839997999899
Q ss_pred CCCC
Q ss_conf 6766
Q gi|254780157|r 68 GGAA 71 (165)
Q Consensus 68 G~aa 71 (165)
|...
T Consensus 83 G~~~ 86 (264)
T 2dtx_A 83 GIES 86 (264)
T ss_dssp CCCC
T ss_pred CCCC
T ss_conf 8899
No 193
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=34.65 E-value=24 Score=15.75 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=31.3
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC-EEEEEEEHHCCHHHHHHHHHHHH
Q ss_conf 98874999958816989999999999980998-26545301038799998898765
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGID-YEARIISAHRTPDRLIEFAKNAR 56 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~-~~~~V~SAHR~p~~l~~~~~~~~ 56 (165)
.++-||+||.|+.| -+...+++.|.+++-+ +.+-++ -|+.+++.+..++..
T Consensus 3 ~L~gKvalITGas~--GIG~aiA~~lA~~~~~Ga~Vv~~--~r~~~~l~~~~~~l~ 54 (259)
T 1oaa_A 3 GLGCAVCVLTGASR--GFGRALAPQLARLLSPGSVMLVS--ARSESMLRQLKEELG 54 (259)
T ss_dssp CCBSEEEEESSCSS--HHHHHHHHHHHTTBCTTCEEEEE--ESCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCC--HHHHHHHHHHHHCCCCCCEEEEE--ECCHHHHHHHHHHHH
T ss_conf 97998899907787--89999999998613489989999--899999999999987
No 194
>1ujn_A Dehydroquinate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus HB8} SCOP: e.22.1.1
Probab=34.53 E-value=25 Score=15.74 Aligned_cols=83 Identities=18% Similarity=0.315 Sum_probs=51.7
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE--EEHHCCHHHHHHHHHHHHHCCC---EEEEEEECC-CCCCHHHHH
Q ss_conf 7499995881698999999999998099826545--3010387999988987653598---299997267-668511346
Q gi|254780157|r 5 PPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARI--ISAHRTPDRLIEFAKNARFEGF---KLIIAGAGG-AAHLPGMIA 78 (165)
Q Consensus 5 pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V--~SAHR~p~~l~~~~~~~~~~~~---~viIa~AG~-aaaLpgvva 78 (165)
.++.|+.... +.+-..+.++.+.-.+.+.+ .-.+++.+.+.++.+.+.+.+. +++|++-|+ -.-+.|.+|
T Consensus 29 ~~~~iv~d~~----v~~~~~~~~~~l~~~~~~~i~~gE~~K~~~~~~~i~~~l~~~~~~r~~~ivaiGGG~v~D~agf~A 104 (348)
T 1ujn_A 29 GPAALLFDRR----VEGFAQEVAKALGVRHLLGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVA 104 (348)
T ss_dssp SCEEEEEEGG----GHHHHHHHHHHHTCCCEEEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHHH
T ss_pred CCEEEEECCC----HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEHHHHHH
T ss_conf 8899998933----899999999845875599968985538999999999999865999867348975812400589999
Q ss_pred HH--CCCCEEEECCC
Q ss_conf 52--24203661257
Q gi|254780157|r 79 AM--TSLPVLGVPII 91 (165)
Q Consensus 79 ~~--t~~PVIgVP~~ 91 (165)
+. --.|.|-||+.
T Consensus 105 s~y~rgi~~i~vPTT 119 (348)
T 1ujn_A 105 ATYLRGVAYLAFPTT 119 (348)
T ss_dssp HHBTTCCEEEEEECS
T ss_pred HHHHCCCEEEEECCC
T ss_conf 997269446620683
No 195
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure initiative; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=34.21 E-value=25 Score=15.70 Aligned_cols=83 Identities=11% Similarity=0.138 Sum_probs=55.3
Q ss_pred CCCCEEEEEECCCC-----C---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 98874999958816-----9---899999999999809982654530103879999889876535982999972676685
Q gi|254780157|r 2 NIAPPVAIIMGSQS-----D---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHL 73 (165)
Q Consensus 2 ~~~pkV~Ii~GS~S-----D---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaL 73 (165)
+.+..|++++=+.. | ..+.+.+.+.+++.| |.+.+...+..++...++++....++++-+|...-.. .
T Consensus 6 ~~t~~Iglvip~~~~~~~~npf~~~~i~~i~~~~~~~g--y~~~l~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~--~ 81 (292)
T 3k4h_A 6 QTTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEG--YALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSRE--N 81 (292)
T ss_dssp -CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTT--CEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBT--T
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC--C
T ss_conf 88897999966786565448899999999999999869--9999982899889999999999837987899971668--8
Q ss_pred HHHHHHH--CCCCEEEE
Q ss_conf 1134652--24203661
Q gi|254780157|r 74 PGMIAAM--TSLPVLGV 88 (165)
Q Consensus 74 pgvva~~--t~~PVIgV 88 (165)
...+.-+ ...||+-+
T Consensus 82 ~~~~~~l~~~~~pvV~~ 98 (292)
T 3k4h_A 82 DRIIQYLHEQNFPFVLI 98 (292)
T ss_dssp CHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
T ss_conf 58999999749998997
No 196
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=33.96 E-value=25 Score=15.68 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=38.5
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE--------------------EEEEHHCCHHHHHHHHHHHHH--C
Q ss_conf 998874999958816989999999999980998265--------------------453010387999988987653--5
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEA--------------------RIISAHRTPDRLIEFAKNARF--E 58 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~--------------------~V~SAHR~p~~l~~~~~~~~~--~ 58 (165)
|+.+-||++|.|+.+ -+...+++.|.+-|...-+ .+..=...++.+.++.+...+ .
T Consensus 5 m~L~gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (261)
T 3n74_A 5 MSLEGKVALITGAGS--GFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG 82 (261)
T ss_dssp CTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHC
T ss_conf 678999899938887--899999999998799899998999999999998389679999627999999999999999809
Q ss_pred CCEEEEEEECCC
Q ss_conf 982999972676
Q gi|254780157|r 59 GFKLIIAGAGGA 70 (165)
Q Consensus 59 ~~~viIa~AG~a 70 (165)
.++++|..||..
T Consensus 83 ~iD~lVnnAG~~ 94 (261)
T 3n74_A 83 KVDILVNNAGIG 94 (261)
T ss_dssp CCCEEEECCCCC
T ss_pred CCEEEEECCCCC
T ss_conf 970999898545
No 197
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=33.50 E-value=11 Score=17.98 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=22.4
Q ss_pred CCCCCEEEEEECCCCCHHH--HHHHHHHHHHCCCCEEEEEE
Q ss_conf 9988749999588169899--99999999980998265453
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKI--MKYAADMLDTLGIDYEARII 39 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~--~~~a~~~L~~~gI~~~~~V~ 39 (165)
|+ .-||+|++|+.|-.-- ..-+..+++.++.+...-++
T Consensus 1 m~-~~kI~vl~GG~S~E~eiSl~Sa~~v~~~l~~~~~~~~i 40 (322)
T 2fb9_A 1 ME-FMRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVI 40 (322)
T ss_dssp CC-CCCEEEEEECSSTTHHHHHHHHHHHHHHCSSCEEEEEE
T ss_pred CC-CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 99-78899993878742198999999999966987647999
No 198
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=33.34 E-value=26 Score=15.61 Aligned_cols=108 Identities=16% Similarity=0.262 Sum_probs=65.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHH---HHCCCCEEEEEE------EHHCCHHHHHHHHHHHHHCCCEEEEEEECCC-CCCHH
Q ss_conf 4999958816989999999999---980998265453------0103879999889876535982999972676-68511
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADML---DTLGIDYEARII------SAHRTPDRLIEFAKNARFEGFKLIIAGAGGA-AHLPG 75 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L---~~~gI~~~~~V~------SAHR~p~~l~~~~~~~~~~~~~viIa~AG~a-aaLpg 75 (165)
++.|-.||+......+.....- +++|++...-+. .-.++|+.+...+..+.+-|.+++=+---.. ..+.-
T Consensus 117 ~~~v~~g~~~e~~~l~~~a~i~~e~~~~glp~i~~~yp~g~~~~~~~d~~~i~~aaR~a~ELGADiiK~~~p~~~e~~~~ 196 (273)
T 2qjg_A 117 SIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSYTGDIDSFRD 196 (273)
T ss_dssp EEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCCSSHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 99985489607999999999999999739936998623677766777889999999999985998885217999899999
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCCCHHHHHH--CCCCCCCEEE
Q ss_conf 3465224203661257766675001699840--3569862044
Q gi|254780157|r 76 MIAAMTSLPVLGVPIISQTLGGIDSLLSIVQ--MPAGVPVGTM 116 (165)
Q Consensus 76 vva~~t~~PVIgVP~~~~~~~G~dallS~vq--MP~Gvpvatv 116 (165)
++. .+..||+=. .++.-+..+.+|.+++ |-.|..=.++
T Consensus 197 vv~-~~~~Pvvv~--gG~~~~~~~~~l~~v~~A~~~Ga~G~~~ 236 (273)
T 2qjg_A 197 VVK-GCPAPVVVA--GGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HHH-HCSSCEEEE--CCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHH-HCCCCEEEE--CCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 997-489877997--7888888999999999999879969982
No 199
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=33.33 E-value=26 Score=15.61 Aligned_cols=31 Identities=29% Similarity=0.242 Sum_probs=21.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 998874999958816989999999999980998
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGID 33 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~ 33 (165)
|+.+.+|++|.|+.| -+...+++.|.+-|..
T Consensus 3 ~~~~k~vAlITGas~--GIG~aia~~la~~G~~ 33 (250)
T 3nyw_A 3 LEKQKGLAIITGASQ--GIGAVIAAGLATDGYR 33 (250)
T ss_dssp --CCCCEEEEESTTS--HHHHHHHHHHHHHTCE
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCE
T ss_conf 879999999956973--9999999999987998
No 200
>1k2w_A Sorbitol dehydrogenase; short-chain dehydrogenase, enzyme, oxidoreductase; 2.40A {Rhodobacter sphaeroides} SCOP: c.2.1.2
Probab=33.21 E-value=26 Score=15.60 Aligned_cols=67 Identities=16% Similarity=0.088 Sum_probs=39.0
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC---------------------EEEEEEEHHCCHHHHHHHHHHHHH--
Q ss_conf 998874999958816989999999999980998---------------------265453010387999988987653--
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGID---------------------YEARIISAHRTPDRLIEFAKNARF-- 57 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~---------------------~~~~V~SAHR~p~~l~~~~~~~~~-- 57 (165)
|..+-|+++|.|+.+. +...+++.|-+.|.. +.. +..=-..++.+.++.++..+
T Consensus 1 M~L~gK~alVTGas~G--IG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~~ 77 (256)
T 1k2w_A 1 MRLDGKTALITGSARG--IGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACA-IALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp CTTTTEEEEEETCSSH--HHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEE-EECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEE-EEEECCCHHHHHHHHHHHHHHC
T ss_conf 9789998999388868--999999999987998999979899999999985895699-9973899999999999999976
Q ss_pred CCCEEEEEEECCC
Q ss_conf 5982999972676
Q gi|254780157|r 58 EGFKLIIAGAGGA 70 (165)
Q Consensus 58 ~~~~viIa~AG~a 70 (165)
..++++|..||..
T Consensus 78 g~iDilVnnAG~~ 90 (256)
T 1k2w_A 78 GSIDILVNNAALF 90 (256)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
T ss_conf 9997999899999
No 201
>1qxo_A Chorismate synthase; beta-alpha-beta, flavoprotein, shikimate, anti-infective, lyase; HET: FMN EPS; 2.00A {Streptococcus pneumoniae} SCOP: d.258.1.1
Probab=33.06 E-value=26 Score=15.58 Aligned_cols=88 Identities=14% Similarity=0.221 Sum_probs=48.8
Q ss_pred HHHHHHHHCCCCEEEEEEEHH------------------------C-----CHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 999999980998265453010------------------------3-----87999988987653598299997267668
Q gi|254780157|r 22 YAADMLDTLGIDYEARIISAH------------------------R-----TPDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 22 ~a~~~L~~~gI~~~~~V~SAH------------------------R-----~p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
=|.+.|++|||...-+|.+.+ | ..+++.++++.+..++. .
T Consensus 145 iAk~~L~~~gI~i~s~v~~IG~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~m~~~I~~ar~~gD-----------S 213 (388)
T 1qxo_A 145 VAKRLLAELDMEIANHVVVFGGKEIDVPENLTVAEIKQRAAQSEVSIVNQEREQEIKDYIDQIKRDGD-----------T 213 (388)
T ss_dssp HHHHHHHHTTCEEEEEEEEETTEECCCCSSCCHHHHHHHHHTSTTCCSCGGGHHHHHHHHHHHHHTTC-----------C
T ss_pred HHHHHHHHCCEEECCEEEEECCEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-----------C
T ss_conf 99999984575352136874545733732100456666413588777797887778999999983389-----------8
Q ss_pred CHHHHHHHCCCCEEEECCCCCC---C-CCCCCHHHHHHCCCCCCCEEEECCCCCCHHHH
Q ss_conf 5113465224203661257766---6-75001699840356986204431675312289
Q gi|254780157|r 73 LPGMIAAMTSLPVLGVPIISQT---L-GGIDSLLSIVQMPAGVPVGTMAIGQSGAINAS 127 (165)
Q Consensus 73 Lpgvva~~t~~PVIgVP~~~~~---~-~G~dallS~vqMP~Gvpvatv~vg~~~~~NAa 127 (165)
|.| -...=+.|||+--|. | +.+|+.|+-.-| ++| |+-+|-.+.||.++
T Consensus 214 lGG----~ve~~~~gvP~GLG~pv~~d~kLda~LA~A~m--SIp-AvKgvEfG~GF~~a 265 (388)
T 1qxo_A 214 IGG----VVETVVGGVPVGLGSYVQWDRKLDARLAQAVV--SIN-AFKGVEFGLGFEAG 265 (388)
T ss_dssp BCE----EEEEEEESCCTTCSCSSSGGGCHHHHHHHHHH--TST-TEEEEEETTGGGGG
T ss_pred CCC----EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH--CCH-HHHEECCCCCHHHH
T ss_conf 775----69999975898870886777632499999872--723-44120216537576
No 202
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=32.86 E-value=26 Score=15.56 Aligned_cols=69 Identities=19% Similarity=0.323 Sum_probs=43.0
Q ss_pred ECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECC
Q ss_conf 58816989999999999980998265453010387999988987653598299997267668511346522420366125
Q gi|254780157|r 11 MGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPVLGVPI 90 (165)
Q Consensus 11 ~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PVIgVP~ 90 (165)
+=|+++=|...++...|++.||+|+..-.+- .++...++.+.. +..+.|+|=+
T Consensus 5 iysk~~Cp~C~~ak~~L~~~~i~y~~~di~~--~~~~~~~l~~~~-----------------------g~~tvP~v~i-- 57 (82)
T 1fov_A 5 IYTKETCPYCHRAKALLSSKGVSFQELPIDG--NAAKREEMIKRS-----------------------GRTTVPQIFI-- 57 (82)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCCCEEEECTT--CSHHHHHHHHHH-----------------------SSCCSCEEEE--
T ss_pred EEECCCCHHHHHHHHHHHHCCCCEEEEECCC--CHHHHHHHHHHC-----------------------CCCCCCEEEE--
T ss_conf 9937999769999999986699579984677--789999999973-----------------------9996798999--
Q ss_pred CCCCCCCCCCHHHHHH
Q ss_conf 7766675001699840
Q gi|254780157|r 91 ISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 91 ~~~~~~G~dallS~vq 106 (165)
.+...+|.|-|..+.+
T Consensus 58 ~~~~IGG~del~~l~~ 73 (82)
T 1fov_A 58 DAQHIGGYDDLYALDA 73 (82)
T ss_dssp TTEEEESHHHHHHHHH
T ss_pred CCEEEECHHHHHHHHH
T ss_conf 9999978799999998
No 203
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glycosidase, hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A*
Probab=32.82 E-value=26 Score=15.56 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=37.5
Q ss_pred EEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 999958-8169899999999999809982654530103879999889876535982999972
Q gi|254780157|r 7 VAIIMG-SQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGA 67 (165)
Q Consensus 7 V~Ii~G-S~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A 67 (165)
|+|-.| .-+++|-.++..+.|+.+||.. +|+-++. ++-+ +-....+.+|++++-
T Consensus 2 iGv~yG~~~~nlPs~~~v~~llk~~~i~~-VRlY~~d--~~vL----~A~~~~gi~v~vgv~ 56 (316)
T 3em5_A 2 VGVCYGMQGNNLPPVSEVIALYKKSNITR-MRIYDPN--QAVL----EALRGSNIELILGVP 56 (316)
T ss_dssp CEEECCCCCTTCCCHHHHHHHHHHTTCCE-EECSSCC--HHHH----HHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCCCCCHHHHHHHHHHCCCCE-EEEECCC--HHHH----HHHHHCCCEEEEECC
T ss_conf 03778865688969999999999679898-9970899--8999----998865997999416
No 204
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=32.45 E-value=27 Score=15.52 Aligned_cols=64 Identities=19% Similarity=0.191 Sum_probs=45.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEE-------EE-EEHHCCHHHHHHHHHHHHHCCCE-EEEEEECC
Q ss_conf 4999958816989999999999980998265-------45-30103879999889876535982-99997267
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEA-------RI-ISAHRTPDRLIEFAKNARFEGFK-LIIAGAGG 69 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~-------~V-~SAHR~p~~l~~~~~~~~~~~~~-viIa~AG~ 69 (165)
+-.|-.|+-++..-++.....|...|++..+ +| ++...+.....+..+.....|+. .|+..+|+
T Consensus 9 ~y~vQvGaF~~~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~~G~~~~i~~~~gg 81 (81)
T 1uta_A 9 RWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG 81 (81)
T ss_dssp BCCCBCCEESCHHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHHCCSCCBCCCCCC
T ss_pred EEEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 5999998768999999999999865984178228979999987739999999999999987999869937899
No 205
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=32.38 E-value=27 Score=15.51 Aligned_cols=61 Identities=13% Similarity=0.190 Sum_probs=42.7
Q ss_pred CCCEEEEEECCCCCH---HHHHHHHHHHHHCCCCEE---EEEEEHHCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 887499995881698---999999999998099826---5453010387999988987653598299997
Q gi|254780157|r 3 IAPPVAIIMGSQSDW---KIMKYAADMLDTLGIDYE---ARIISAHRTPDRLIEFAKNARFEGFKLIIAG 66 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~---~~~~~a~~~L~~~gI~~~---~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~ 66 (165)
...|++|+.++-... ...+.+.+.|+++|++++ ++|-++--.|-....+.+. +.++.+|+.
T Consensus 12 ~~~ri~IV~s~~n~~I~~~L~~ga~~~l~~~g~~~~i~~~~VPGa~EiP~~~~~l~~~---~~~DaiIaL 78 (156)
T 1c2y_A 12 QSFRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGKS---GKYHAIVCL 78 (156)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHHT---TCCSEEEEE
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHC---CCCCEEEEE
T ss_conf 8988999994287899999999999999975998760799848488999999999863---999879999
No 206
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier- protein) reductase, NAD; HET: NAD; 1.80A {Anaplasma phagocytophilum HZ} PDB: 3k2e_A*
Probab=32.15 E-value=27 Score=15.49 Aligned_cols=71 Identities=10% Similarity=0.086 Sum_probs=46.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE----------------------EEEHHCCHHHHHHHHHHHHH-
Q ss_conf 9988749999588169899999999999809982654----------------------53010387999988987653-
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR----------------------IISAHRTPDRLIEFAKNARF- 57 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~----------------------V~SAHR~p~~l~~~~~~~~~- 57 (165)
|.++-||++|.|..|..-+...+++.|-+.|-...+. +..=-+.++.+.++++...+
T Consensus 26 m~L~GK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 78699989998999986499999999998699999996887999999999973797069966889999999999999984
Q ss_pred -CCCEEEEEEECCCC
Q ss_conf -59829999726766
Q gi|254780157|r 58 -EGFKLIIAGAGGAA 71 (165)
Q Consensus 58 -~~~~viIa~AG~aa 71 (165)
..++++|..||...
T Consensus 106 ~G~iDiLVnnAG~~~ 120 (296)
T 3k31_A 106 WGSLDFVVHAVAFSD 120 (296)
T ss_dssp HSCCSEEEECCCCCC
T ss_pred CCCCCEEEECCCCCC
T ss_conf 699888998374688
No 207
>2rhf_A DNA helicase RECQ; HRDC, D. radiodurans, ATP-binding, hydrolase, nucleotide-binding; HET: DNA; 1.10A {Deinococcus radiodurans R1}
Probab=32.11 E-value=25 Score=15.66 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=11.4
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q ss_conf 69999999999999999999
Q gi|254780157|r 136 LDDKELTDRLNEWRTQQTIS 155 (165)
Q Consensus 136 ~~d~~i~~kl~~~r~~~~~~ 155 (165)
..|++|.++|+++|.+..++
T Consensus 2 ~~d~~L~~~L~~~R~~~A~~ 21 (77)
T 2rhf_A 2 SHNADLSEALRELRRELMKE 21 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
T ss_conf 74799999999999999987
No 208
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=32.08 E-value=27 Score=15.48 Aligned_cols=64 Identities=20% Similarity=0.330 Sum_probs=40.4
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHH---------------------HCC
Q ss_conf 99887499995881698999999999998099826545301038799998898765---------------------359
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNAR---------------------FEG 59 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~---------------------~~~ 59 (165)
|+.+-|+++|.|+.+ -+...+++.|.+.|.. |+-..|+.+++.+..++.. -..
T Consensus 3 ~~l~gK~alITGas~--GIG~aia~~la~~Ga~----V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~ 76 (244)
T 1cyd_A 3 LNFSGLRALVTGAGK--GIGRDTVKALHASGAK----VVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGP 76 (244)
T ss_dssp CCCTTCEEEEESTTS--HHHHHHHHHHHHTTCE----EEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCC
T ss_conf 898999899948886--8999999999987999----9999798899999998648974999838999999999985499
Q ss_pred CEEEEEEECCC
Q ss_conf 82999972676
Q gi|254780157|r 60 FKLIIAGAGGA 70 (165)
Q Consensus 60 ~~viIa~AG~a 70 (165)
++++|..||..
T Consensus 77 iDilVnnAG~~ 87 (244)
T 1cyd_A 77 VDLLVNNAALV 87 (244)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
T ss_conf 98999899899
No 209
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: NAP; 2.07A {Thermotoga maritima MSB8} SCOP: c.2.1.2
Probab=32.07 E-value=27 Score=15.48 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=37.8
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCC-------------------------CEEEEEEEHHCCHHHHHHHHHHHH
Q ss_conf 9887499995881698999999999998099-------------------------826545301038799998898765
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGI-------------------------DYEARIISAHRTPDRLIEFAKNAR 56 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI-------------------------~~~~~V~SAHR~p~~l~~~~~~~~ 56 (165)
+++-||++|.|+.+ -+...++..|-+.|. ++....+ =-..++.+.+++++..
T Consensus 18 ~L~gKvalITGas~--GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~g~~~~~~~~-Dv~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 18 DLRGRVALVTGGSR--GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC-DVSNYEEVKKLLEAVK 94 (267)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC-CTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEE-CCCCHHHHHHHHHHHH
T ss_conf 88999899948987--89999999999879989999798899999999999970995799993-4899999999999999
Q ss_pred H--CCCEEEEEEECCC
Q ss_conf 3--5982999972676
Q gi|254780157|r 57 F--EGFKLIIAGAGGA 70 (165)
Q Consensus 57 ~--~~~~viIa~AG~a 70 (165)
+ ..++++|..||..
T Consensus 95 ~~~G~iDiLVnnAG~~ 110 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGIN 110 (267)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9759998999899989
No 210
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=32.01 E-value=27 Score=15.47 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=38.3
Q ss_pred CCCCC--EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE-EEHHCCHHHHHHHHHHHHHCCCE---EEEEEECCCCCCH
Q ss_conf 99887--499995881698999999999998099826545-30103879999889876535982---9999726766851
Q gi|254780157|r 1 MNIAP--PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARI-ISAHRTPDRLIEFAKNARFEGFK---LIIAGAGGAAHLP 74 (165)
Q Consensus 1 m~~~p--kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V-~SAHR~p~~l~~~~~~~~~~~~~---viIa~AG~aaaLp 74 (165)
|+-.| .+.||-...-|.. ....+|+++|....+.- .++.-.-..+.+|.+..+....+ ++|..-|..+.+-
T Consensus 38 m~~~~rG~~lIinn~~~D~~---~L~~~f~~LgF~V~~~~dlt~~em~~~l~~f~~~~~~~~~d~~v~~ilsHG~~~~i~ 114 (272)
T 3h11_A 38 MKSKPLGICLIIDCIGNETE---LLRDTFTSLGYEVQKFLHLSMHGISQILGQFACMPEHRDYDSFVCVLVSRGGSQSVY 114 (272)
T ss_dssp CCCSSSEEEEEEESSCCCCS---HHHHHHHHHTEEEEEEESCBHHHHHHHHHHHHTCGGGGGCSEEEEEEEEEEETTEEC
T ss_pred CCCCCCEEEEEECCCCCHHH---HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE
T ss_conf 89998339999789863199---999999879988999618999999999999996554478877999985678768577
No 211
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=31.78 E-value=27 Score=15.45 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=37.9
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE----------------------EEEEHHCCHHHHHHHHHHHHH--
Q ss_conf 98874999958816989999999999980998265----------------------453010387999988987653--
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEA----------------------RIISAHRTPDRLIEFAKNARF-- 57 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~----------------------~V~SAHR~p~~l~~~~~~~~~-- 57 (165)
+++-||++|.|+.| -+...+++.|.+.|....+ .+..-...++.+.++.+...+
T Consensus 26 ~L~gKvalVTGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 26 SLAGRIALVTGGSR--GIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 89998799928887--8999999999986998999979889999999997504987999902899999999999999973
Q ss_pred CCCEEEEEEECCC
Q ss_conf 5982999972676
Q gi|254780157|r 58 EGFKLIIAGAGGA 70 (165)
Q Consensus 58 ~~~~viIa~AG~a 70 (165)
..++++|..||..
T Consensus 104 g~iD~lVnnAG~~ 116 (276)
T 2b4q_A 104 ARLDILVNNAGTS 116 (276)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
T ss_conf 9961999899668
No 212
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=31.39 E-value=28 Score=15.41 Aligned_cols=60 Identities=8% Similarity=0.074 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEE--EEEEHHC---CHHHHHHHHHHHHHCCCEEEEE-EECCCCCCHHHHHHHC
Q ss_conf 6989999999999980998265--4530103---8799998898765359829999-7267668511346522
Q gi|254780157|r 15 SDWKIMKYAADMLDTLGIDYEA--RIISAHR---TPDRLIEFAKNARFEGFKLIIA-GAGGAAHLPGMIAAMT 81 (165)
Q Consensus 15 SD~~~~~~a~~~L~~~gI~~~~--~V~SAHR---~p~~l~~~~~~~~~~~~~viIa-~AG~aaaLpgvva~~t 81 (165)
|-.|...=+..+.... ++..+ .=.+.|. +|..+.++. ..++||. +.|++.-+..+.....
T Consensus 16 s~~pl~~lv~~I~gd~-v~V~li~~g~dpH~ye~~p~d~~~l~------~ADliv~~G~~lE~~~~~~~~~~~ 81 (284)
T 3cx3_A 16 SFYPIYAMVKEVSGDL-NDVRMIQSSSGIHSFEPSANDIAAIY------DADVFVYHSHTLESWAGSLDPNLK 81 (284)
T ss_dssp SSHHHHHHHHHHHTTS-SEEEECCCCSCTTTCCCCHHHHHHHH------HSSEEEESCTTTSCTTTTCCTTTT
T ss_pred ECHHHHHHHHHHCCCC-CEEEECCCCCCCCCCCCCHHHHHHHH------CCCEEEEECCCCHHHHHHHHHHHH
T ss_conf 8789999999974996-15997189989873558999999996------499999918850778999999864
No 213
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=31.27 E-value=18 Score=16.68 Aligned_cols=26 Identities=15% Similarity=0.253 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 999988987653598299997267668
Q gi|254780157|r 46 DRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 46 ~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
+++.++++...... .||+++||+|..
T Consensus 9 ~~~a~~l~~~~~~k-IvvlTGAGiSt~ 34 (289)
T 1q1a_A 9 RKIAAHMKSNPNAK-VIFMVGAGISTS 34 (289)
T ss_dssp HHHHHHHHHSTTSC-EEEEECGGGGGG
T ss_pred HHHHHHHHHCCCCC-EEEEECCHHHHH
T ss_conf 99999999689998-999968124064
No 214
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=31.13 E-value=28 Score=15.38 Aligned_cols=37 Identities=14% Similarity=0.275 Sum_probs=28.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHH
Q ss_conf 816989999999999980998265453010387999988
Q gi|254780157|r 13 SQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEF 51 (165)
Q Consensus 13 S~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~ 51 (165)
|.++=|..+++...|++.||+|+..-+.- .++...++
T Consensus 7 s~~~Cp~C~~ak~~L~~~~i~y~~idi~~--~~~~~~~~ 43 (81)
T 1h75_A 7 TRNDCVQCHATKRAMENRGFDFEMINVDR--VPEAAEAL 43 (81)
T ss_dssp ECTTCHHHHHHHHHHHHTTCCCEEEETTT--CHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHCCCCEEEEECCC--CHHHHHHH
T ss_conf 59999648999999984588559999998--99999999
No 215
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=31.09 E-value=28 Score=15.38 Aligned_cols=55 Identities=11% Similarity=-0.003 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHC--CCEEEEEEECCCC
Q ss_conf 9899999999999809982654530103879999889876535--9829999726766
Q gi|254780157|r 16 DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFE--GFKLIIAGAGGAA 71 (165)
Q Consensus 16 D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~--~~~viIa~AG~aa 71 (165)
+.+..++..+.++++|..+....+ =.+.++.+.++.+...++ .++++|..||...
T Consensus 35 ~~~~~~~~~~~~~~~g~~~~~~~~-Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~ 91 (244)
T 1edo_A 35 SAKAAEEVSKQIEAYGGQAITFGG-DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITR 91 (244)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEEC-CTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 979999999999974992899983-799999999999999998099869998997666
No 216
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 2i80_A*
Probab=31.06 E-value=20 Score=16.27 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=21.6
Q ss_pred CCCCCEEEEEECCCCCH-----HHHHHHHHHHHHCCCCE
Q ss_conf 99887499995881698-----99999999999809982
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDW-----KIMKYAADMLDTLGIDY 34 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~-----~~~~~a~~~L~~~gI~~ 34 (165)
|+ +.+|+||+|+.|-. ..++.+.+.|++.|.+.
T Consensus 1 m~-k~~I~vl~GG~S~E~~iSl~Sg~~v~~aL~~~g~~v 38 (364)
T 2i87_A 1 MT-KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHV 38 (364)
T ss_dssp ---CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEE
T ss_pred CC-CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 99-988999959187543999999999999877739979
No 217
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=30.69 E-value=28 Score=15.33 Aligned_cols=66 Identities=23% Similarity=0.251 Sum_probs=37.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE--------------------------EEEEHHCCHHHHHHHHHHHH
Q ss_conf 8874999958816989999999999980998265--------------------------45301038799998898765
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEA--------------------------RIISAHRTPDRLIEFAKNAR 56 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~--------------------------~V~SAHR~p~~l~~~~~~~~ 56 (165)
.+-||++|.|+.+ -+...++..|-+.|....+ .+..=.+.++.+.+.++...
T Consensus 4 l~gKvalVTGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (278)
T 1spx_A 4 FAEKVAIITGSSN--GIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 6998899948587--89999999999879989999798899999999999657877765799855799999999999999
Q ss_pred H--CCCEEEEEEECCC
Q ss_conf 3--5982999972676
Q gi|254780157|r 57 F--EGFKLIIAGAGGA 70 (165)
Q Consensus 57 ~--~~~~viIa~AG~a 70 (165)
. ..++++|..||..
T Consensus 82 ~~~G~iDiLVnnAG~~ 97 (278)
T 1spx_A 82 GKFGKLDILVNNAGAA 97 (278)
T ss_dssp HHHSCCCEEEECCC--
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9819998899899867
No 218
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3
Probab=30.33 E-value=29 Score=15.29 Aligned_cols=54 Identities=9% Similarity=0.166 Sum_probs=37.7
Q ss_pred EEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 999958-8169899999999999809982654530103879999889876535982999972
Q gi|254780157|r 7 VAIIMG-SQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGA 67 (165)
Q Consensus 7 V~Ii~G-S~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A 67 (165)
|+|-.| -.+++|..++..+.|+..||. .+|+-+++ ++-|. -....+.+|++++-
T Consensus 1 ~gv~yg~~~~nlps~~~vv~llks~gi~-~VRlY~~d--~~vL~----A~~~~gi~V~lGv~ 55 (312)
T 2cyg_A 1 IGVCYGMLGNNLPPPSEVVSLYKSNNIA-RMRLYDPN--QAALQ----ALRNSNIQVLLDVP 55 (312)
T ss_dssp CEEECCCCCSSCCCHHHHHHHHHHTTCC-EEEESSCC--HHHHH----HHTTSCCEEEEEEC
T ss_pred CEEECCCCCCCCCCHHHHHHHHHHCCCC-EEEEECCC--HHHHH----HHHHCCCEEEEECC
T ss_conf 9465887678897999999999977989-89961899--79999----76746987999625
No 219
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=30.31 E-value=29 Score=15.29 Aligned_cols=58 Identities=16% Similarity=0.254 Sum_probs=33.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 9988749999588169899999999999809982654530103879999889876535982999972676
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGA 70 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~a 70 (165)
|+|+|||.|+ +.|....+-....|+ .| |++ ..|. +..+..+.++ ...++++|.=--|.
T Consensus 1 MsmkprILiV---DD~~~~r~~l~~~L~-~~--~~v--~~a~-~g~eal~~l~---~~~pdliilD~~mP 58 (133)
T 3nhm_A 1 MSLKPKVLIV---ENSWTMRETLRLLLS-GE--FDC--TTAA-DGASGLQQAL---AHPPDVLISDVNMD 58 (133)
T ss_dssp ----CEEEEE---CSCHHHHHHHHHHHT-TT--SEE--EEES-SHHHHHHHHH---HSCCSEEEECSSCS
T ss_pred CCCCCEEEEE---ECCHHHHHHHHHHHH-CC--CEE--EEEC-CHHHHHHHHH---HCCCCEEEECCCCC
T ss_conf 9999979999---498999999999997-89--989--9989-9999999998---47999999759999
No 220
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=30.07 E-value=29 Score=15.27 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH--CCCEEEEEEECCCC
Q ss_conf 89999999999980998265453010387999988987653--59829999726766
Q gi|254780157|r 17 WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF--EGFKLIIAGAGGAA 71 (165)
Q Consensus 17 ~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~--~~~~viIa~AG~aa 71 (165)
.+-.+++.+.|+..+.......+ =...++.+.++.+...+ ..++++|.-||...
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~-Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~ 94 (276)
T 1wma_A 39 VTRGQAAVQQLQAEGLSPRFHQL-DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAF 94 (276)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEC-CTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEE-ECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 89999999999855995799993-289999999999999997299778997672367
No 221
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=29.99 E-value=29 Score=15.26 Aligned_cols=54 Identities=15% Similarity=0.143 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH--CCCEEEEEEECCC
Q ss_conf 989999999999980998265453010387999988987653--5982999972676
Q gi|254780157|r 16 DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF--EGFKLIIAGAGGA 70 (165)
Q Consensus 16 D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~--~~~~viIa~AG~a 70 (165)
+..-.++..+.++++|.++....+ =-+.++.+.++.++..+ ..++++|..||..
T Consensus 38 ~~~~~~~~~~~~~~~g~~~~~~~~-Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~ 93 (246)
T 2uvd_A 38 NEQKANEVVDEIKKLGSDAIAVRA-DVANAEDVTNMVKQTVDVFGQVDILVNNAGVT 93 (246)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC-CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 989999999999970996899982-69999999999999999809996999899877
No 222
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=29.98 E-value=29 Score=15.26 Aligned_cols=48 Identities=29% Similarity=0.155 Sum_probs=35.2
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCC
Q ss_conf 4999958816989999999999980998265453010387999988987653598
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGF 60 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~ 60 (165)
||+||-|+- .+....+..|.+.| |++.+.| |+++++.+..++.+....
T Consensus 2 kI~iigGaG---~iG~alA~~la~~G--~~V~l~~--R~~e~~~~~~~~~~~~~~ 49 (212)
T 1jay_A 2 RVALLGGTG---NLGKGLALRLATLG--HEIVVGS--RREEKAEAKAAEYRRIAG 49 (212)
T ss_dssp EEEEETTTS---HHHHHHHHHHHTTT--CEEEEEE--SSHHHHHHHHHHHHHHHS
T ss_pred EEEEEECCH---HHHHHHHHHHHHCC--CEEEEEE--CCHHHHHHHHHHHHHCCC
T ss_conf 799994845---99999999999889--9899996--999999999999884156
No 223
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=29.89 E-value=29 Score=15.27 Aligned_cols=61 Identities=10% Similarity=0.068 Sum_probs=40.0
Q ss_pred EEEEEE-CCCCCHHHHHHHHHHHHHCCCCEE------------------------EEEEEHHCCHHHHHHHHHHHHHCCC
Q ss_conf 499995-881698999999999998099826------------------------5453010387999988987653598
Q gi|254780157|r 6 PVAIIM-GSQSDWKIMKYAADMLDTLGIDYE------------------------ARIISAHRTPDRLIEFAKNARFEGF 60 (165)
Q Consensus 6 kV~Ii~-GS~SD~~~~~~a~~~L~~~gI~~~------------------------~~V~SAHR~p~~l~~~~~~~~~~~~ 60 (165)
+.+|+= .+=+=..+++++.+.|+++|+... ..|-+-.=+++.+.++++++..+|+
T Consensus 10 ~~~~~~~f~w~~~~i~~~l~dyl~~lG~taI~l~Pv~e~~~~~~~~~y~gY~~~dy~id~~~Gt~~dfk~LV~~aH~~GI 89 (471)
T 1jae_A 10 RNSIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGV 89 (471)
T ss_dssp CEEEEEETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 83699940585899999999999971998899392832777899887555888662537778999999999999998799
Q ss_pred EEEEEE
Q ss_conf 299997
Q gi|254780157|r 61 KLIIAG 66 (165)
Q Consensus 61 ~viIa~ 66 (165)
+||+=+
T Consensus 90 ~VIlD~ 95 (471)
T 1jae_A 90 RIYVDA 95 (471)
T ss_dssp EEEEEE
T ss_pred EEEEEE
T ss_conf 899998
No 224
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron transport, structural genomics; NMR {Brucella melitensis}
Probab=29.70 E-value=29 Score=15.23 Aligned_cols=71 Identities=24% Similarity=0.345 Sum_probs=43.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCE
Q ss_conf 49999588169899999999999809982654530103879999889876535982999972676685113465224203
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPV 85 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PV 85 (165)
+|.|. |.+.=|...++...|++.||+|+..-.+. .++...++.+.. | ..+.|+
T Consensus 7 ~V~iY--t~~~Cp~C~~ak~lL~~~~i~y~~~di~~--~~~~~~~~~~~~---g--------------------~~tvPq 59 (92)
T 2khp_A 7 DVIIY--TRPGCPYCARAKALLARKGAEFNEIDASA--TPELRAEMQERS---G--------------------RNTFPQ 59 (92)
T ss_dssp CEEEE--ECTTCHHHHHHHHHHHHTTCCCEEEESTT--SHHHHHHHHHHH---T--------------------SSCCCE
T ss_pred EEEEE--ECCCCHHHHHHHHHHHHCCCCCEEEECCC--CHHHHHHHHHHC---C--------------------CCCCCE
T ss_conf 89999--89999469999999996599809982678--878999999980---9--------------------972385
Q ss_pred EEECCCCCCCCCCCCHHHHH
Q ss_conf 66125776667500169984
Q gi|254780157|r 86 LGVPIISQTLGGIDSLLSIV 105 (165)
Q Consensus 86 IgVP~~~~~~~G~dallS~v 105 (165)
|=+ .+...+|.|-|..+.
T Consensus 60 I~i--~g~~IGG~~el~~~~ 77 (92)
T 2khp_A 60 IFI--GSVHVGGCDDLYALE 77 (92)
T ss_dssp EEE--TTEEEESHHHHHHHH
T ss_pred EEE--CCEEEECHHHHHHHH
T ss_conf 999--999997889999999
No 225
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reductase; structural genomics, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=29.61 E-value=30 Score=15.22 Aligned_cols=29 Identities=24% Similarity=0.247 Sum_probs=17.8
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 8874999958816989999999999980998
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGID 33 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~ 33 (165)
++-||++|.|+.| -+...+++.|-+.|..
T Consensus 5 L~gK~alITGas~--GIG~aia~~la~~Ga~ 33 (255)
T 3icc_A 5 LKGKVALVTGASR--GIGRAIAKRLANDGAL 33 (255)
T ss_dssp TTTCEEEETTCSS--HHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCE
T ss_conf 5999899948887--8999999999987999
No 226
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=29.39 E-value=30 Score=15.19 Aligned_cols=29 Identities=28% Similarity=0.368 Sum_probs=21.4
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 8874999958816989999999999980998
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGID 33 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~ 33 (165)
++-||++|.|+.+ -+...++..|-+.|..
T Consensus 14 L~gKvalVTGas~--GIG~aiA~~la~~Ga~ 42 (278)
T 2bgk_A 14 LQDKVAIITGGAG--GIGETTAKLFVRYGAK 42 (278)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCE
T ss_conf 7999899948687--8999999999987998
No 227
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=29.21 E-value=24 Score=15.83 Aligned_cols=29 Identities=28% Similarity=0.319 Sum_probs=20.9
Q ss_pred HHCCHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 10387999988987653598299997267668
Q gi|254780157|r 41 AHRTPDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 41 AHR~p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
-+.+.+++.+.++++ + -.|++++||+|..
T Consensus 32 ~~~~l~~~~~~l~~a--k-~IvvlTGAGISt~ 60 (354)
T 2hjh_A 32 NFFTIDHFIQKLHTA--R-KILVLTGAGVSTS 60 (354)
T ss_dssp TCCSHHHHHHHHHHC--S-SEEEEECGGGGGG
T ss_pred CHHHHHHHHHHHHHC--C-CEEEEECHHHHHH
T ss_conf 703199999999849--9-0999948376386
No 228
>3iaa_A CALG2; glycosyltransferase, calicheamicin, TDP, enediyne, TR; HET: TYD; 2.50A {Micromonospora echinospora}
Probab=29.10 E-value=30 Score=15.16 Aligned_cols=132 Identities=18% Similarity=0.181 Sum_probs=66.6
Q ss_pred CCEEEEEECCC--CCHHHHHHHHHHHHHCCCCEEEEEE----------------EHHCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 87499995881--6989999999999980998265453----------------01038799998898765359829999
Q gi|254780157|r 4 APPVAIIMGSQ--SDWKIMKYAADMLDTLGIDYEARII----------------SAHRTPDRLIEFAKNARFEGFKLIIA 65 (165)
Q Consensus 4 ~pkV~Ii~GS~--SD~~~~~~a~~~L~~~gI~~~~~V~----------------SAHR~p~~l~~~~~~~~~~~~~viIa 65 (165)
.|.|.+..|+. .+...+.++.+.|++.++.+..... -.+..|.. .+. ..++.+|+
T Consensus 247 ~~~v~v~~g~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~p~~--~~~-----~~~~~~i~ 319 (416)
T 3iaa_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHV--KVL-----EQATVCVT 319 (416)
T ss_dssp CCEEEEECCSSSCCCHHHHHHHHHHTTTSSCEEEEECCSSSCGGGGCCCCTTEEEESCCCHH--HHH-----HHEEEEEE
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCCC--CCC-----CCCCEEEE
T ss_conf 84799977842346799999999999857987999958987756662389978997423632--223-----24423575
Q ss_pred EECCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH-CCCHHHHHH
Q ss_conf 7267668511346522420366125776667500169984035698620443167531228999999970-699999999
Q gi|254780157|r 66 GAGGAAHLPGMIAAMTSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILA-LDDKELTDR 144 (165)
Q Consensus 66 ~AG~aaaLpgvva~~t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~-~~d~~i~~k 144 (165)
-+|... + .=+-..-+|||++|..+.- ...--.+.+ .|+ +.. +.. +-+++.-++..|.- +.|++++++
T Consensus 320 ~gg~~t-~--~Eala~G~P~v~~p~~~dq---~~~a~~i~~--~g~--G~~-l~~-~~~t~~~L~~al~~lL~dp~~r~~ 387 (416)
T 3iaa_A 320 HGGMGT-L--MEALYWGRPLVVVPQSFDV---QPMARRVDQ--LGL--GAV-LPG-EKADGDTLLAAVGAVAADPALLAR 387 (416)
T ss_dssp SCCHHH-H--HHHHHTTCCEEECCCSGGG---HHHHHHHHH--TTS--EEE-CCG-GGCCHHHHHHHHHHHHSCHHHHHH
T ss_pred ECCCCC-H--HHHHHHCCCEEEECCCCCH---HHHHHHHHH--CCC--EEE-CCC-CCCCHHHHHHHHHHHHCCHHHHHH
T ss_conf 156684-9--9999949999993572538---999999998--798--898-260-579999999999999779999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780157|r 145 LNEWRTQQTI 154 (165)
Q Consensus 145 l~~~r~~~~~ 154 (165)
+.+.+++..+
T Consensus 388 ~~~~~~~~~~ 397 (416)
T 3iaa_A 388 VEAMRGHVRR 397 (416)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
T ss_conf 9999999865
No 229
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, cytoplasm, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=28.77 E-value=31 Score=15.12 Aligned_cols=91 Identities=12% Similarity=0.043 Sum_probs=51.4
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHH--------------HCCCEEEEEEE-
Q ss_conf 887499995881698999999999998099826545301038799998898765--------------35982999972-
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNAR--------------FEGFKLIIAGA- 67 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~--------------~~~~~viIa~A- 67 (165)
-.|+|.|++|.-..=--.=-++..|...|+...+.+...-+..+.+..-.+-++ ...++++|-+-
T Consensus 84 ~~P~VlVlcG~GnNGgDGlv~AR~L~~~G~~V~v~l~~~~~~~~~~~~ql~l~~~~~~~~v~~~~~l~~~~~DlIIDAL~ 163 (259)
T 3d3k_A 84 QRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPTSPVDLVINCLD 163 (259)
T ss_dssp CCCEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCBCSSCCHHHHHHHHHHTTSSCEEESCGGGSCSSCCSEEEEECC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEEECCC
T ss_conf 89869999899987699999999999789969999578756899999999999863897013410036677518997255
Q ss_pred CCCCCCH---H----HH--HHHCCCCEEEECCCCC
Q ss_conf 6766851---1----34--6522420366125776
Q gi|254780157|r 68 GGAAHLP---G----MI--AAMTSLPVLGVPIISQ 93 (165)
Q Consensus 68 G~aaaLp---g----vv--a~~t~~PVIgVP~~~~ 93 (165)
|.....+ + ++ .-....||++|=+++|
T Consensus 164 G~g~~~~~~~~~~~~li~~~N~~~a~VlSiDiPSG 198 (259)
T 3d3k_A 164 CPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPVH 198 (259)
T ss_dssp CTTCTTGGGSHHHHHHHHHHHHHCSCEEEESCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 47777676658999999999857997899978999
No 230
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=28.71 E-value=31 Score=15.12 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 99998898765359829999726
Q gi|254780157|r 46 DRLIEFAKNARFEGFKLIIAGAG 68 (165)
Q Consensus 46 ~~l~~~~~~~~~~~~~viIa~AG 68 (165)
+...+.+++++..+++.+|++-|
T Consensus 291 egr~ka~~nL~~~gId~LivIGG 313 (989)
T 3opy_A 291 WGRLQACYNMVSNGIDALVVCGG 313 (989)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEECC
T ss_conf 68999999999869998999898
No 231
>3ff4_A Uncharacterized protein; structural genomics, PSI- 2, protein structure initiative, midwest center for structural genomics; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=28.64 E-value=31 Score=15.11 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=24.0
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 98874999958816989999999999980998
Q gi|254780157|r 2 NIAPPVAIIMGSQSDWKIMKYAADMLDTLGID 33 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~ 33 (165)
|..++++|+=.|.........+...|.++|.+
T Consensus 2 ~~~K~iaVvGaS~~~~k~g~~v~~~L~~~G~~ 33 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLKSHGHE 33 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCE
T ss_conf 97664999966699998299999999978998
No 232
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=28.62 E-value=31 Score=15.11 Aligned_cols=132 Identities=14% Similarity=0.032 Sum_probs=77.1
Q ss_pred CCEEEEEECCCC-C---HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
Q ss_conf 874999958816-9---899999999999809982654530103879999889876535982999972676685113465
Q gi|254780157|r 4 APPVAIIMGSQS-D---WKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAA 79 (165)
Q Consensus 4 ~pkV~Ii~GS~S-D---~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~ 79 (165)
+..|+++...-+ + ..+.+.+...+++.| |.+.+.+....+++..++++....++++-+|...-.....- -...
T Consensus 13 s~~Igliv~~~~~~~f~~~~~~gi~~~a~~~g--y~l~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~-~~~~ 89 (301)
T 3miz_A 13 SNTFGIITDYVSTTPYSVDIVRGIQDWANANG--KTILIANTGGSSEREVEIWKMFQSHRIDGVLYVTMYRRIVD-PESG 89 (301)
T ss_dssp CCEEEEEESSTTTCCSCHHHHHHHHHHHHHTT--CEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEEEEEEECC-CCCT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHH-HHHH
T ss_conf 99899996887679799999999999999779--98999979999699999999987578768996163100101-7778
Q ss_pred HCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC-------------CCHHHHHHHH
Q ss_conf 224203661257766675001699840356986204431675312289999999706-------------9999999999
Q gi|254780157|r 80 MTSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL-------------DDKELTDRLN 146 (165)
Q Consensus 80 ~t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~-------------~d~~i~~kl~ 146 (165)
....|++.+-....... ..| .| +.|+ +.++..+++-|.- .+..-.+++.
T Consensus 90 ~~~ip~V~~~~~~~~~~-------------~~~--~V--~~D~-~~~~~~~~~~L~~~g~~~i~~i~~~~~~~~~~~r~~ 151 (301)
T 3miz_A 90 DVSIPTVMINCRPQTRE-------------LLP--SI--EPDD-YQGARDLTRYLLERGHRRIGYIRLNPILLGAELRLD 151 (301)
T ss_dssp TCCCCEEEEEEECSSTT-------------SSC--EE--EECH-HHHHHHHHHHHHTTTCCSEEEEECCTTSHHHHHHHH
T ss_pred HCCCCEEEEEECCCCCC-------------CCC--EE--EECH-HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH
T ss_conf 44999899961257888-------------887--89--9779-999999999999818975999847854564146659
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780157|r 147 EWRTQQTISI 156 (165)
Q Consensus 147 ~~r~~~~~~v 156 (165)
-|++-+.+.-
T Consensus 152 g~~~~l~~~~ 161 (301)
T 3miz_A 152 AFRRTTSEFG 161 (301)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHCC
T ss_conf 9999999859
No 233
>1eto_A FIS, factor for inversion stimulation; transcriptional activation region, DNA-binding protein, transcription activator; 1.90A {Escherichia coli} SCOP: a.4.1.12 PDB: 1etq_A 1ety_A 1fia_A 3fis_A 3iv5_A* 3jr9_A* 3jra_A* 3jrb_A* 3jrc_A* 3jrd_A* 3jre_A* 3jrf_A* 3jrg_A* 3jrh_A* 3jri_A* 1f36_A 1etv_A 1etk_A 1etx_A 1fip_A ...
Probab=28.57 E-value=22 Score=16.08 Aligned_cols=22 Identities=14% Similarity=0.353 Sum_probs=18.8
Q ss_pred HHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 9999997069999999999999
Q gi|254780157|r 128 LLAVAILALDDKELTDRLNEWR 149 (165)
Q Consensus 128 l~A~~Il~~~d~~i~~kl~~~r 149 (165)
.-|+++||++-..++.||++|.
T Consensus 75 ~~aA~~LGisR~tL~~klk~~~ 96 (98)
T 1eto_A 75 TRAALMMGINRGTLRKKLKKYG 96 (98)
T ss_dssp HHHHHHHTSCHHHHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHC
T ss_conf 9999997989999999999868
No 234
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=28.51 E-value=31 Score=15.09 Aligned_cols=46 Identities=9% Similarity=0.112 Sum_probs=32.3
Q ss_pred CCCEEEEEECCCCC--HHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHH
Q ss_conf 88749999588169--89999999999980998265453010387999
Q gi|254780157|r 3 IAPPVAIIMGSQSD--WKIMKYAADMLDTLGIDYEARIISAHRTPDRL 48 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD--~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l 48 (165)
..++|.|+.+|.+- ..+++.+++-|++-|+++++.=+..-...+.+
T Consensus 3 ~~kkV~IvY~S~tGnT~~~A~~Ia~gl~~~gv~v~~~~~~~~~~~~~~ 50 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAAVDLQEL 50 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSCCCHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
T ss_conf 788899999999833999999999999862983699985557877889
No 235
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold; HET: 1PE MES; 1.80A {Aquifex aeolicus VF5} PDB: 2p68_A*
Probab=28.49 E-value=31 Score=15.09 Aligned_cols=67 Identities=15% Similarity=0.216 Sum_probs=36.4
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC-------------------------EEEEEEEHHCCHHHHHHHHHHH
Q ss_conf 998874999958816989999999999980998-------------------------2654530103879999889876
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGID-------------------------YEARIISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~-------------------------~~~~V~SAHR~p~~l~~~~~~~ 55 (165)
|+.+-||++|.|+.+ -+...+++.|-+-|.. +.... .=-+.++.+.++.+..
T Consensus 3 m~L~gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~g~~~~~~~-~Dv~~~~~v~~~~~~~ 79 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTR--GIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE-MNLLSEESINKAFEEI 79 (248)
T ss_dssp CCCTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEE-CCTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEE-CCCCCHHHHHHHHHHH
T ss_conf 985999899937787--8999999999987998999979889999999999886299389998-6789999999999999
Q ss_pred HH--CCCEEEEEEECCC
Q ss_conf 53--5982999972676
Q gi|254780157|r 56 RF--EGFKLIIAGAGGA 70 (165)
Q Consensus 56 ~~--~~~~viIa~AG~a 70 (165)
.+ ..++++|.-||..
T Consensus 80 ~~~~G~iDiLVnnAG~~ 96 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGIT 96 (248)
T ss_dssp HHHSSCCSEEEECCCCC
T ss_pred HHHCCCCCEEEECCCCC
T ss_conf 99749987999899889
No 236
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, structural genomics, PSI; 2.00A {Aquifex aeolicus VF5}
Probab=28.48 E-value=31 Score=15.09 Aligned_cols=69 Identities=13% Similarity=0.099 Sum_probs=41.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE----------------------EEHHCCHHHHHHHHHHHHH--C
Q ss_conf 887499995881698999999999998099826545----------------------3010387999988987653--5
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARI----------------------ISAHRTPDRLIEFAKNARF--E 58 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V----------------------~SAHR~p~~l~~~~~~~~~--~ 58 (165)
++-|+++|.|..|..-+...+++.|.+-|....+.- ..--..++.+.++.+...+ .
T Consensus 19 L~gK~alVTGass~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~e~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 98 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf 48997999899998679999999999869999998588689999999985259728996575889999999999999749
Q ss_pred CCEEEEEEECCCC
Q ss_conf 9829999726766
Q gi|254780157|r 59 GFKLIIAGAGGAA 71 (165)
Q Consensus 59 ~~~viIa~AG~aa 71 (165)
.++++|..||...
T Consensus 99 ~iDilVnnAg~~~ 111 (285)
T 2p91_A 99 SLDIIVHSIAYAP 111 (285)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEEECCCCC
T ss_conf 9778996320024
No 237
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=28.43 E-value=16 Score=16.98 Aligned_cols=71 Identities=14% Similarity=0.207 Sum_probs=40.8
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCC
Q ss_conf 88749999588169899999999999809982654530103879999889876535982999972676685113465224
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTS 82 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~ 82 (165)
..+.+.++.|+..|....++. .+.++. ...++- -+..++..+++ .++++|+.-++-.||+ +...
T Consensus 209 ~~~~~~l~~g~~~e~~~~~~i---~~~~~~---i~l~~~-~sl~el~~li~-----~a~l~I~~Dtg~~HlA----aa~~ 272 (326)
T 2gt1_A 209 SGIRIKLPWGAPHEEERAKRL---AEGFAY---VEVLPK-MSLEGVARVLA-----GAKFVVSVDTGLSHLT----AALD 272 (326)
T ss_dssp TCCEEEECCSSHHHHHHHHHH---HTTCTT---EEECCC-CCHHHHHHHHH-----TCSEEEEESSHHHHHH----HHTT
T ss_pred CCCCCCCCCCCHHHHHHHHHH---HHCCCE---EEECCC-CCHHHHHHHHH-----CCCEEEECCCHHHHHH----HHCC
T ss_conf 288520146877889999998---633551---663275-21789999996-----5979998987599999----9869
Q ss_pred CCEEEEC
Q ss_conf 2036612
Q gi|254780157|r 83 LPVLGVP 89 (165)
Q Consensus 83 ~PVIgVP 89 (165)
.|+|++=
T Consensus 273 ~p~i~lf 279 (326)
T 2gt1_A 273 RPNITVY 279 (326)
T ss_dssp CCEEEEE
T ss_pred CCEEEEE
T ss_conf 9989998
No 238
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=28.34 E-value=31 Score=15.07 Aligned_cols=66 Identities=18% Similarity=0.203 Sum_probs=34.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCE------------------------EEE-EEEHHCCHHHHHHHHHHHHH
Q ss_conf 88749999588169899999999999809982------------------------654-53010387999988987653
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDY------------------------EAR-IISAHRTPDRLIEFAKNARF 57 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~------------------------~~~-V~SAHR~p~~l~~~~~~~~~ 57 (165)
.+-||++|.|+.+ -+...+++.|-+-|... ... +..=-..++.+.++.+...+
T Consensus 30 lkgKvalITGas~--GIG~aiA~~la~~Ga~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 30 WRDRLALVTGASG--GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp GTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 4998899927787--89999999999879999999798899999999998569995199997458999999999999999
Q ss_pred --CCCEEEEEEECCC
Q ss_conf --5982999972676
Q gi|254780157|r 58 --EGFKLIIAGAGGA 70 (165)
Q Consensus 58 --~~~~viIa~AG~a 70 (165)
..++++|-.||..
T Consensus 108 ~~g~iDiLVnnAG~~ 122 (279)
T 1xg5_A 108 QHSGVDICINNAGLA 122 (279)
T ss_dssp HHCCCSEEEECCCCC
T ss_pred HCCCCCEEEECCCCC
T ss_conf 739975899888779
No 239
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=28.33 E-value=26 Score=15.55 Aligned_cols=36 Identities=28% Similarity=0.284 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 799998898765359829999726766851134652
Q gi|254780157|r 45 PDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 45 p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
-+++.+.+.+...++-++|+++.|.+++++.-.+..
T Consensus 28 I~~a~~~i~~~~~~~~kI~~~GnGgSa~~A~h~a~~ 63 (188)
T 1tk9_A 28 IAKVGELLCECLKKGGKILICGNGGSAADAQHFAAE 63 (188)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 999999999999879989999687318889999998
No 240
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A*
Probab=28.21 E-value=31 Score=15.06 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=37.9
Q ss_pred CCCEEEEEECCCC-----------------------CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH--
Q ss_conf 8874999958816-----------------------989999999999980998265453010387999988987653--
Q gi|254780157|r 3 IAPPVAIIMGSQS-----------------------DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF-- 57 (165)
Q Consensus 3 ~~pkV~Ii~GS~S-----------------------D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~-- 57 (165)
++-||++|.|+.+ +....++..+.++.+|.++....+- -+.++.+.++.++..+
T Consensus 5 L~gKv~lVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D-v~~~~~v~~~~~~~~~~~ 83 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGD-VTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECC-TTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHHHC
T ss_conf 8999899958887899999999998799899996984779999999999629958999766-899999999999999973
Q ss_pred CCCEEEEEEECCCC
Q ss_conf 59829999726766
Q gi|254780157|r 58 EGFKLIIAGAGGAA 71 (165)
Q Consensus 58 ~~~~viIa~AG~aa 71 (165)
..++++|..||...
T Consensus 84 G~iDilVnnAG~~~ 97 (261)
T 1gee_A 84 GKLDVMINNAGLEN 97 (261)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
T ss_conf 99979998999999
No 241
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=27.90 E-value=32 Score=15.03 Aligned_cols=14 Identities=29% Similarity=0.475 Sum_probs=8.9
Q ss_pred CCEEEEEEECCCCC
Q ss_conf 98299997267668
Q gi|254780157|r 59 GFKLIIAGAGGAAH 72 (165)
Q Consensus 59 ~~~viIa~AG~aaa 72 (165)
..-|++++||+|..
T Consensus 16 ~~ivvlTGAGiS~~ 29 (253)
T 1ma3_A 16 KHAVVFTGAGISAE 29 (253)
T ss_dssp SSEEEEECGGGSCC
T ss_pred CCEEEEECCHHHHH
T ss_conf 96899979332120
No 242
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=27.29 E-value=32 Score=14.96 Aligned_cols=125 Identities=18% Similarity=0.218 Sum_probs=60.4
Q ss_pred EEEEEECCCC--CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCC
Q ss_conf 4999958816--98999999999998099826545301038799998898765359829999726766851134652242
Q gi|254780157|r 6 PVAIIMGSQS--DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSL 83 (165)
Q Consensus 6 kV~Ii~GS~S--D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~ 83 (165)
.+.|+.||.+ =..++++..+.|+..|++..+.-... +..+.... ..+||+..-..+..|.
T Consensus 23 pi~IlYgS~tG~ae~~A~~l~~~l~~~g~~~~v~~l~~---------~~~~l~~~-~~viivssT~~G~~Pd-------- 84 (191)
T 1bvy_F 23 PLLVLYGSNMGTAEGTARDLADIAMSKGFAPQVATLDS---------HAGNLPRE-GAVLIVTASYNGHPPD-------- 84 (191)
T ss_dssp CEEEEEECSSSHHHHHHHHHHHHHHTTTCCCEEEEGGG---------STTCCCSS-SEEEEEECCBTTBCCT--------
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCC---------CHHHHHHC-CEEEEEECCCCCCCHH--------
T ss_conf 48999999667999999999999986799619941532---------48673216-7389995478998778--------
Q ss_pred CEEEECCCCCCCCCCCCHHHHHH--CCCCCCCEEEECCCCCC---HHHHHH--HHHHHHC----------C--CHHHHHH
Q ss_conf 03661257766675001699840--35698620443167531---228999--9999706----------9--9999999
Q gi|254780157|r 84 PVLGVPIISQTLGGIDSLLSIVQ--MPAGVPVGTMAIGQSGA---INASLL--AVAILAL----------D--DKELTDR 144 (165)
Q Consensus 84 PVIgVP~~~~~~~G~dallS~vq--MP~Gvpvatv~vg~~~~---~NAal~--A~~Il~~----------~--d~~i~~k 144 (165)
... .=++ .|.-.. .-.|+..+..+.|...= ||++-- -.++-.+ - .....+.
T Consensus 85 --------~~~-~f~~-~L~~~~~~~l~~~~faVfGlGDs~Y~~~Fc~~~~~ld~~L~~lGA~~i~~~~~~D~~~~~e~~ 154 (191)
T 1bvy_F 85 --------NAK-QFVD-WLDQASADEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEADASDDFEGT 154 (191)
T ss_dssp --------TTH-HHHH-HHHTCCSSCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCCCCEEEEEEETTSCHHHH
T ss_pred --------HHH-HHHH-HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCHHHH
T ss_conf --------899-9999-998420110158659999523760788980889999999997699597755622278980889
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999984
Q gi|254780157|r 145 LNEWRTQQTISISE 158 (165)
Q Consensus 145 l~~~r~~~~~~v~~ 158 (165)
+..|.++.+..+.+
T Consensus 155 ~~~W~~~l~~~L~~ 168 (191)
T 1bvy_F 155 YEEWREHMWSDVAA 168 (191)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999998
No 243
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=27.25 E-value=32 Score=14.95 Aligned_cols=132 Identities=15% Similarity=0.177 Sum_probs=65.7
Q ss_pred CCEEEEEECCCC--CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHH-H---------------HHHHHHHHHHCCCEEEEE
Q ss_conf 874999958816--9899999999999809982654530103879-9---------------998898765359829999
Q gi|254780157|r 4 APPVAIIMGSQS--DWKIMKYAADMLDTLGIDYEARIISAHRTPD-R---------------LIEFAKNARFEGFKLIIA 65 (165)
Q Consensus 4 ~pkV~Ii~GS~S--D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~-~---------------l~~~~~~~~~~~~~viIa 65 (165)
.|.|.+..|+.. +......+.+.+...+..+.... ..+... . ..++. ...+++|+
T Consensus 231 ~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~v~~~~~~~~~~~l-----~~~~~~i~ 303 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAI--GGFLDPAVLGPLPPNVEAHQWIPFHSVL-----AHARACLT 303 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEEC--CTTSCGGGGCSCCTTEEEESCCCHHHHH-----TTEEEEEE
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE--CCCCCHHHHHCCCCCEEEEECCCHHHHH-----HCCCEEEE
T ss_conf 8569864775333789999999999874695799961--8988755662079978995116726653-----10013665
Q ss_pred EECCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHC-CCHHHHHH
Q ss_conf 72676685113465224203661257766675001699840356986204431675312289999999706-99999999
Q gi|254780157|r 66 GAGGAAHLPGMIAAMTSLPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAILAL-DDKELTDR 144 (165)
Q Consensus 66 ~AG~aaaLpgvva~~t~~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il~~-~d~~i~~k 144 (165)
-+|...-+ =+-..-+|+|++|..+. +..+.- ..++ -.|+ +.+ +.. +..|+.-++-.|..+ +|++++++
T Consensus 304 ~gG~~t~~---Eal~~G~P~v~iP~~~~--dq~~na-~~l~-~~G~--g~~-~~~-~~~~~~~La~ai~~ll~d~~~r~~ 372 (402)
T 3ia7_A 304 HGTTGAVL---EAFAAGVPLVLVPHFAT--EAAPSA-ERVI-ELGL--GSV-LRP-DQLEPASIREAVERLAADSAVRER 372 (402)
T ss_dssp CCCHHHHH---HHHHTTCCEEECGGGCG--GGHHHH-HHHH-HTTS--EEE-CCG-GGCSHHHHHHHHHHHHHCHHHHHH
T ss_pred ECCCCHHH---HHHHCCCCEEEECCCCC--CHHHHH-HHHH-HCCC--EEE-CCC-CCCCHHHHHHHHHHHHCCHHHHHH
T ss_conf 23556699---99980999899559866--299999-9999-8798--898-060-369999999999999779999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780157|r 145 LNEWRTQQT 153 (165)
Q Consensus 145 l~~~r~~~~ 153 (165)
+.+.+++..
T Consensus 373 ~~~~~~~~~ 381 (402)
T 3ia7_A 373 VRRMQRDIL 381 (402)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999987
No 244
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, lipid metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=26.79 E-value=33 Score=14.90 Aligned_cols=62 Identities=13% Similarity=0.135 Sum_probs=38.4
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHC----------------------------------CHHHH
Q ss_conf 88749999588169899999999999809982654530103----------------------------------87999
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHR----------------------------------TPDRL 48 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR----------------------------------~p~~l 48 (165)
.+-||++|.|+.+ -+...+++.|-+.|.. |+-..| .++.+
T Consensus 5 L~gKvalVTGas~--GIG~aia~~la~~Ga~----V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~d~~~v 78 (264)
T 2pd6_A 5 LRSALALVTGAGS--GIGRAVSVRLAGEGAT----VAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAA 78 (264)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTCE----EEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH
T ss_conf 3998899928787--8999999999987999----999969889999999998742210125677479998437999999
Q ss_pred HHHHHHHHHC--C-CEEEEEEECCC
Q ss_conf 9889876535--9-82999972676
Q gi|254780157|r 49 IEFAKNARFE--G-FKLIIAGAGGA 70 (165)
Q Consensus 49 ~~~~~~~~~~--~-~~viIa~AG~a 70 (165)
.++.+...++ + .+++|..||..
T Consensus 79 ~~~~~~~~~~~G~~idilvnnAG~~ 103 (264)
T 2pd6_A 79 RCLLEQVQACFSRPPSVVVSCAGIT 103 (264)
T ss_dssp HHHHHHHHHHHSSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 9999999998489983999689989
No 245
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Wolinella succinogenes}
Probab=26.76 E-value=33 Score=14.90 Aligned_cols=48 Identities=19% Similarity=0.266 Sum_probs=27.2
Q ss_pred HHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 999999999809982654530103879999889876535982999972676685
Q gi|254780157|r 20 MKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHL 73 (165)
Q Consensus 20 ~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaL 73 (165)
.++....+++.|++++..+... .|. ..+.... +++++++.+......+
T Consensus 68 l~~~~~~~~~~gv~~~~~i~~G--~~~--~~i~~~~--~~~dliV~G~~~~~~~ 115 (138)
T 3idf_A 68 TQKFSTFFTEKGINPFVVIKEG--EPV--EMVLEEA--KDYNLLIIGSSENSFL 115 (138)
T ss_dssp HHHHHHHHHTTTCCCEEEEEES--CHH--HHHHHHH--TTCSEEEEECCTTSTT
T ss_pred HHHHHHHHHHCCCEEEEEEECC--CHH--HHHHHHH--CCCCEEEEECCCCCCC
T ss_conf 9999998876496499999768--759--9899875--0255899928999951
No 246
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=26.60 E-value=33 Score=14.88 Aligned_cols=70 Identities=20% Similarity=0.244 Sum_probs=37.5
Q ss_pred HHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCH--------HHHHHHCCCCEEEECCC
Q ss_conf 9999999998099826545301038799998898765359829999726766851--------13465224203661257
Q gi|254780157|r 20 MKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLP--------GMIAAMTSLPVLGVPII 91 (165)
Q Consensus 20 ~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLp--------gvva~~t~~PVIgVP~~ 91 (165)
.++....+...|+++++.....+-.| ...++.. .++++.+|.+.=+...+. .-+.-.+..||+-||..
T Consensus 88 l~~~~~~~~~~~~~~~v~~~~~~G~~--~~~i~~~--~~~~DLIVmG~~g~~~~~~~~~GS~~~~vl~~~~~Pvlvv~~~ 163 (294)
T 3loq_A 88 LPEVAQKIEAAGIKAEVIKPFPAGDP--VVEIIKA--SENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVYIFKHD 163 (294)
T ss_dssp HHHHHHHHHHTTCEEEECSSCCEECH--HHHHHHH--HTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCSSCEEEECCC
T ss_pred HHHHHHHHHHCCCCEEEEEEEECCCH--HHHHHHH--HHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCC
T ss_conf 99998655434985699999844988--9999999--7469999987778898510336981477887378977998267
Q ss_pred CC
Q ss_conf 76
Q gi|254780157|r 92 SQ 93 (165)
Q Consensus 92 ~~ 93 (165)
..
T Consensus 164 ~~ 165 (294)
T 3loq_A 164 MV 165 (294)
T ss_dssp TT
T ss_pred CC
T ss_conf 54
No 247
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, ATP-binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium}
Probab=26.53 E-value=32 Score=14.97 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=21.3
Q ss_pred CCCCCEEEEEECCCCCHH-----HHHHHHHHHHHCCCC
Q ss_conf 998874999958816989-----999999999980998
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWK-----IMKYAADMLDTLGID 33 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~-----~~~~a~~~L~~~gI~ 33 (165)
|+ +.||+|++|+.|..- -+..+.+.|++-|.+
T Consensus 1 m~-k~ki~vl~GG~S~E~evSl~Sg~~v~~~L~~~~~~ 37 (364)
T 3i12_A 1 MA-KLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFD 37 (364)
T ss_dssp -C-CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEE
T ss_pred CC-CCEEEEEECCCCCCHHHHHHHHHHHHHHHCHHCCE
T ss_conf 99-87899996946873899999999999975654797
No 248
>3e61_A Putative transcriptional repressor of ribose operon; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=26.42 E-value=34 Score=14.86 Aligned_cols=84 Identities=10% Similarity=0.059 Sum_probs=49.7
Q ss_pred CCEEEEEECCCCCH---HHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
Q ss_conf 87499995881698---999999999998099826545301038799998898765359829999726766851134652
Q gi|254780157|r 4 APPVAIIMGSQSDW---KIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~---~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~ 80 (165)
+..|++++.+-+|- .+.+.+...+++.|.. +.+......++...++.+....++++.+|........+...+. .
T Consensus 8 s~~IGvi~p~~~~~~~~~l~~~i~~~a~~~g~~--~~~~~~~~~~~~e~~~~~~l~~~~vdgiii~~~~~~~~~~~l~-~ 84 (277)
T 3e61_A 8 SKLIGLLLPDMSNPFFTLIARGVEDVALAHGYQ--VLIGNSDNDIKKAQGYLATFVSHNCTGMISTAFNENIIENTLT-D 84 (277)
T ss_dssp --CEEEEESCTTSHHHHHHHHHHHHHHHHTTCC--EEEEECTTCHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHHH-H
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCE--EEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH-H
T ss_conf 998999909997789999999999999984999--9999789998999999999986598299952531057999999-7
Q ss_pred CCCCEEEECC
Q ss_conf 2420366125
Q gi|254780157|r 81 TSLPVLGVPI 90 (165)
Q Consensus 81 t~~PVIgVP~ 90 (165)
...||+-+-.
T Consensus 85 ~~ipvv~~~~ 94 (277)
T 3e61_A 85 HHIPFVFIDR 94 (277)
T ss_dssp C-CCEEEGGG
T ss_pred CCCCEEEEEE
T ss_conf 5998899730
No 249
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=26.18 E-value=34 Score=14.83 Aligned_cols=70 Identities=23% Similarity=0.333 Sum_probs=41.3
Q ss_pred CCEE-EEEECCCCCHH-HHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHH-HCCCEEEEEEECCCCCC
Q ss_conf 8749-99958816989-99999999998099826545301038799998898765-35982999972676685
Q gi|254780157|r 4 APPV-AIIMGSQSDWK-IMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNAR-FEGFKLIIAGAGGAAHL 73 (165)
Q Consensus 4 ~pkV-~Ii~GS~SD~~-~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~-~~~~~viIa~AG~aaaL 73 (165)
+|+. .|+.|++.+-. +.+.-.+..+++||+++..-....-+.+++.+.++... +..++-|+.--=.-.|+
T Consensus 34 ~P~LavIlvg~d~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~LN~D~~V~GIivQlPlP~~~ 106 (285)
T 3l07_A 34 TPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHI 106 (285)
T ss_dssp CCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTS
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 9727999958975679999999999997488589997899988999999999996467867799606765561
No 250
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.11 E-value=34 Score=14.82 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=30.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 88749999588169899999999999809982654530
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIIS 40 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~S 40 (165)
|.+||+|+.....+.--.-...+.|.+-|+++++.-.+
T Consensus 1 M~KkVavl~~~~~~~~e~~~~~~~f~~~g~~~~v~sv~ 38 (175)
T 3cne_A 1 MAKKVAVLAVNPVNGCGLFQYLEAFFENGISYKVFAVS 38 (175)
T ss_dssp -CCEEEEEECSSBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEECCCCEEHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 99679999489948468999999999789929999988
No 251
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=26.11 E-value=34 Score=14.82 Aligned_cols=58 Identities=10% Similarity=0.122 Sum_probs=27.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEE----EEHHC---CHHHHHHHHHHHHHCCCEEE-EEEECCCCCCHHHHHHH
Q ss_conf 1698999999999998099826545----30103---87999988987653598299-99726766851134652
Q gi|254780157|r 14 QSDWKIMKYAADMLDTLGIDYEARI----ISAHR---TPDRLIEFAKNARFEGFKLI-IAGAGGAAHLPGMIAAM 80 (165)
Q Consensus 14 ~SD~~~~~~a~~~L~~~gI~~~~~V----~SAHR---~p~~l~~~~~~~~~~~~~vi-Ia~AG~aaaLpgvva~~ 80 (165)
+|-.|...=+..+.... .++.. .++|- +|..+.++ .+.++| ..+.|++.-+...+..+
T Consensus 17 ~s~~pl~~iv~~I~Gd~---~~V~li~~g~dPH~ye~~p~d~~~l------~~Adliv~~G~~lE~~l~~~~~~~ 82 (286)
T 3gi1_A 17 TSFYPMYAMTKEVSGDL---NDVRMIQSGAGIHSFEPSVNDVAAI------YDADLFVYHSHTLEAWARDLDPNL 82 (286)
T ss_dssp ESSHHHHHHHHHHHTTS---SEEEEC-----CCSCCCCHHHHHHH------HTSSEEEESCTTTSGGGTTCCTTT
T ss_pred EECHHHHHHHHHHCCCC---CEEEECCCCCCCCCCCCCHHHHHHH------HCCCEEEEECCCCHHHHHHHHHHC
T ss_conf 98789999999983897---1599758998976445899999999------669999992885157899999864
No 252
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP, oxidoreductase, PSI; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=26.00 E-value=34 Score=14.81 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=44.6
Q ss_pred CCCEEEEEE-CCCCCHHH-HHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH-CCCEEEEEEECCCCCC
Q ss_conf 887499995-88169899-99999999980998265453010387999988987653-5982999972676685
Q gi|254780157|r 3 IAPPVAIIM-GSQSDWKI-MKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF-EGFKLIIAGAGGAAHL 73 (165)
Q Consensus 3 ~~pkV~Ii~-GS~SD~~~-~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~-~~~~viIa~AG~aaaL 73 (165)
.+|+.+||. |.+.+-.. .+.-.+..+++||+|+.......-+.+++.+.+++... ....-|+.--=.-.|+
T Consensus 31 ~~P~Laiilvg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~e~el~~~I~~lN~d~~v~GIlvqlPlP~~~ 104 (281)
T 2c2x_A 31 RTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHL 104 (281)
T ss_dssp CCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTS
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 99648999969987899999999999998599799852688778999999999982898655378853586544
No 253
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=25.99 E-value=34 Score=14.81 Aligned_cols=45 Identities=11% Similarity=0.130 Sum_probs=27.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHH
Q ss_conf 887499995881698999999999998099826545301038799998898
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAK 53 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~ 53 (165)
.+-||++|.|+.+- +...+++.|-+-|.. |+-..|+.+++.+..+
T Consensus 5 L~gK~alITGas~G--IG~aia~~la~~Ga~----V~~~~r~~~~l~~~~~ 49 (260)
T 1nff_A 5 LTGKVALVSGGARG--MGASHVRAMVAEGAK----VVFGDILDEEGKAMAA 49 (260)
T ss_dssp TTTCEEEEETTTSH--HHHHHHHHHHHTTCE----EEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCCE----EEEEECCHHHHHHHHH
T ss_conf 59898999488878--999999999987999----9999798899999999
No 254
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A*
Probab=25.87 E-value=34 Score=14.79 Aligned_cols=50 Identities=18% Similarity=0.167 Sum_probs=32.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHH
Q ss_conf 8874999958816989999999999980998265453010387999988987
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKN 54 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~ 54 (165)
++-|+++|.|..++--+...+++.|-+-|.. +-+.+..|..+++.++.++
T Consensus 24 L~gK~~lITG~a~s~GIG~aiA~~la~~Ga~--Vii~~~~~~~~~~~~~~~~ 73 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAE--LAFTYVGQFKDRVEKLCAE 73 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCE--EEEEECTTCHHHHHHHHGG
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCE--EEEEECCCHHHHHHHHHHH
T ss_conf 8998899979988738999999999986999--9999688259999999984
No 255
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protein structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.58 E-value=35 Score=14.76 Aligned_cols=47 Identities=21% Similarity=0.338 Sum_probs=28.1
Q ss_pred CC-CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHH
Q ss_conf 99-887499995881698999999999998099826545301038799998898
Q gi|254780157|r 1 MN-IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAK 53 (165)
Q Consensus 1 m~-~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~ 53 (165)
|+ .+-||++|.|+.+ -+...+++.|-+-|.. |+-..|+.+++.+..+
T Consensus 1 M~kL~GKvalITG~s~--GIG~aia~~la~~Ga~----V~i~~r~~~~l~~~~~ 48 (263)
T 2a4k_A 1 MGRLSGKTILVTGAAS--GIGRAALDLFAREGAS----LVAVDREERLLAEAVA 48 (263)
T ss_dssp -CTTTTCEEEEESTTS--HHHHHHHHHHHHTTCE----EEEEESCHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCE----EEEEECCHHHHHHHHH
T ss_conf 9887998899948886--8999999999987998----9999798899999999
No 256
>3k35_A Mono-ADP-ribosyltransferase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, structural genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=25.43 E-value=35 Score=14.74 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=22.2
Q ss_pred HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 889876535982999972676685113465224203661257766675001699840
Q gi|254780157|r 50 EFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPVLGVPIISQTLGGIDSLLSIVQ 106 (165)
Q Consensus 50 ~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PVIgVP~~~~~~~G~dallS~vq 106 (165)
++++-.......|++++||+|..- |+|..-+ -++||+..+
T Consensus 36 ~la~~l~~sk~ivvlTGAGISt~S-------------GIPdFR~----~~Glw~~~~ 75 (318)
T 3k35_A 36 ELARLVWQSSSVVFHTGAGISTAS-------------GIPDFRG----PHGVWTMEE 75 (318)
T ss_dssp HHHHHHHHCSCEEEEECGGGSGGG-------------TCCCSSS----TTCHHHHHT
T ss_pred HHHHHHHHCCCEEEEECCHHHHCC-------------CCCCCCC----CCCCCCCHH
T ss_conf 999999848988999671331130-------------8898719----098965843
No 257
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=25.41 E-value=35 Score=14.74 Aligned_cols=67 Identities=15% Similarity=0.149 Sum_probs=39.1
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHH-------------------------HCCCCEEEEEEEHHCCHHHHHHHHHHH
Q ss_conf 9988749999588169899999999999-------------------------809982654530103879999889876
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLD-------------------------TLGIDYEARIISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~-------------------------~~gI~~~~~V~SAHR~p~~l~~~~~~~ 55 (165)
|+.+-||++|.|+.+- +...+++.|. ++|..+....+ =-..++.+.++.++.
T Consensus 10 m~l~gK~alVTGas~G--IG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~-Dv~~~~~v~~~~~~~ 86 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRG--IGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC-DVSNTDIVTKTIQQI 86 (265)
T ss_dssp ECCTTEEEEEETTTSH--HHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEEC-CTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEE-CCCCHHHHHHHHHHH
T ss_conf 3789997999288878--9999999999879989999797788999999999970995799990-189999999999999
Q ss_pred HH--CCCEEEEEEECCC
Q ss_conf 53--5982999972676
Q gi|254780157|r 56 RF--EGFKLIIAGAGGA 70 (165)
Q Consensus 56 ~~--~~~~viIa~AG~a 70 (165)
.+ ..++++|..||..
T Consensus 87 ~~~~G~iDilVnnAG~~ 103 (265)
T 1h5q_A 87 DADLGPISGLIANAGVS 103 (265)
T ss_dssp HHHSCSEEEEEECCCCC
T ss_pred HHHCCCCCEEEECCCCC
T ss_conf 99729998999899889
No 258
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=25.08 E-value=35 Score=14.70 Aligned_cols=75 Identities=11% Similarity=0.056 Sum_probs=38.8
Q ss_pred CCCCCE-EEEEECCCCCH-------------------HHHHHHHHHHHHCCCCEEEEE-EEHHCCHHHHHHHHHHH-HHC
Q ss_conf 998874-99995881698-------------------999999999998099826545-30103879999889876-535
Q gi|254780157|r 1 MNIAPP-VAIIMGSQSDW-------------------KIMKYAADMLDTLGIDYEARI-ISAHRTPDRLIEFAKNA-RFE 58 (165)
Q Consensus 1 m~~~pk-V~Ii~GS~SD~-------------------~~~~~a~~~L~~~gI~~~~~V-~SAHR~p~~l~~~~~~~-~~~ 58 (165)
|+-+|+ +++|.|-..-. -=++...++|+++|....+.. .+....-..+.++.+.. +..
T Consensus 12 m~~~prG~aLII~N~~f~~~~~~~~~~~~~~~R~Gs~~D~~~l~~~l~~lGF~V~~~~nlt~~em~~~l~~f~~~~~~~~ 91 (271)
T 3h11_B 12 MKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVEQIYEILKIYQLMDHSNM 91 (271)
T ss_dssp CCSSSCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHSCCTTC
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 79997758999857455864224544455766888199999999999988987999007997999999998767541699
Q ss_pred CC-EEEEEEECCCCCCHH
Q ss_conf 98-299997267668511
Q gi|254780157|r 59 GF-KLIIAGAGGAAHLPG 75 (165)
Q Consensus 59 ~~-~viIa~AG~aaaLpg 75 (165)
.+ -+|+..-|..+.+-|
T Consensus 92 d~~vv~~~sHG~~~~i~~ 109 (271)
T 3h11_B 92 DCFICCILSHGDKGIIYG 109 (271)
T ss_dssp SCEEEEEESCEETTEEEC
T ss_pred CEEEEEEECCCCCCEEEE
T ss_conf 889999966675783774
No 259
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=24.94 E-value=36 Score=14.68 Aligned_cols=67 Identities=15% Similarity=0.088 Sum_probs=40.6
Q ss_pred CCEEEEEECCCC------------CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHH-HCCCEEEEEEECCC
Q ss_conf 874999958816------------98999999999998099826545301038799998898765-35982999972676
Q gi|254780157|r 4 APPVAIIMGSQS------------DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNAR-FEGFKLIIAGAGGA 70 (165)
Q Consensus 4 ~pkV~Ii~GS~S------------D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~-~~~~~viIa~AG~a 70 (165)
+.+++||.-|++ |. -..-....|+++|++........ -.++.+.+-+.... ...++++|+..|.+
T Consensus 15 ~~r~~Iitvgd~~~~~~~~~g~i~D~-ng~~L~~~L~~~G~~v~~~~~v~-Dd~~~i~~al~~~~~~~~~dlVittGG~g 92 (178)
T 2pjk_A 15 SLNFYVITISTSRYEKLLKKEPIVDE-SGDIIKQLLIENGHKIIGYSLVP-DDKIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp CCEEEEEEECHHHHHHHHTTCCCCCH-HHHHHHHHHHHTTCEEEEEEEEC-SCHHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCCC-HHHHHHHHHHHCCCEEEEEEEEC-CCHHHHHHHHHHHHHCCCCCEEECCCCCC
T ss_conf 87899999847887665467987555-69999999998899898987859-99999999999998654886783258776
Q ss_pred CC
Q ss_conf 68
Q gi|254780157|r 71 AH 72 (165)
Q Consensus 71 aa 72 (165)
..
T Consensus 93 ~~ 94 (178)
T 2pjk_A 93 YS 94 (178)
T ss_dssp SS
T ss_pred CC
T ss_conf 77
No 260
>1ntc_A Protein (nitrogen regulation protein (NTRC)); helix-turn-helix, FIS, four-helix bundle, transcription regulation; NMR {Salmonella typhimurium} SCOP: a.4.1.12
Probab=24.73 E-value=32 Score=14.98 Aligned_cols=22 Identities=27% Similarity=0.305 Sum_probs=18.6
Q ss_pred HHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 9999970699999999999999
Q gi|254780157|r 129 LAVAILALDDKELTDRLNEWRT 150 (165)
Q Consensus 129 ~A~~Il~~~d~~i~~kl~~~r~ 150 (165)
-|+++|+++-..++.|+++|..
T Consensus 69 ~AA~~LGI~R~TL~~Klk~~gl 90 (91)
T 1ntc_A 69 EAARLLGWGAATLTAKLKELGM 90 (91)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHCC
T ss_conf 9999979899999999998784
No 261
>1e4e_A Vancomycin/teicoplanin A-type resistance protein VANA; ligase, cell WALL, antibiotic resistance, membrane, plasmid; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=24.70 E-value=28 Score=15.36 Aligned_cols=32 Identities=25% Similarity=0.203 Sum_probs=20.9
Q ss_pred CCCCCEEEEEECCCCCHH-----HHHHHHHHHHHCCCC
Q ss_conf 998874999958816989-----999999999980998
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWK-----IMKYAADMLDTLGID 33 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~-----~~~~a~~~L~~~gI~ 33 (165)
|+ +.||+|++|+.|..- .++.+...|++.|.+
T Consensus 1 M~-k~ki~vl~GG~S~E~~vSl~Sg~~v~~aL~~~~y~ 37 (343)
T 1e4e_A 1 MN-RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYE 37 (343)
T ss_dssp -C-CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEE
T ss_pred CC-CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCE
T ss_conf 99-87899996957842899999999999975162896
No 262
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=24.60 E-value=36 Score=14.64 Aligned_cols=64 Identities=16% Similarity=0.064 Sum_probs=36.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE------------------------EEEHHCCHHHHHHHHHHHHH--CC
Q ss_conf 49999588169899999999999809982654------------------------53010387999988987653--59
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEAR------------------------IISAHRTPDRLIEFAKNARF--EG 59 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~------------------------V~SAHR~p~~l~~~~~~~~~--~~ 59 (165)
||++|.|+.+. +...++..|-+-|...-+. +..=-..++.+.++.++..+ ..
T Consensus 3 KvalVTGas~G--IG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 80 (250)
T 2cfc_A 3 RVAIVTGASSG--NGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CEEEEETTTSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEECCCCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 89999178978--9999999999879989999898889999999999854994899994079999999999999997599
Q ss_pred CEEEEEEECCCC
Q ss_conf 829999726766
Q gi|254780157|r 60 FKLIIAGAGGAA 71 (165)
Q Consensus 60 ~~viIa~AG~aa 71 (165)
++++|..||...
T Consensus 81 iDiLVnnAGi~~ 92 (250)
T 2cfc_A 81 IDVLVNNAGITG 92 (250)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCCCC
T ss_conf 979998997688
No 263
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase, RV2981C, structural genomics, TB structural genomics consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=24.42 E-value=37 Score=14.62 Aligned_cols=30 Identities=20% Similarity=0.158 Sum_probs=20.4
Q ss_pred CCCCEEEEEECCCCCH-----HHHHHHHHHHHHCC
Q ss_conf 9887499995881698-----99999999999809
Q gi|254780157|r 2 NIAPPVAIIMGSQSDW-----KIMKYAADMLDTLG 31 (165)
Q Consensus 2 ~~~pkV~Ii~GS~SD~-----~~~~~a~~~L~~~g 31 (165)
+.+-||+||+|+.|.. -.+..+.+.|++-+
T Consensus 8 ~~K~kI~vl~GG~S~E~eVSl~S~~~v~~~L~~~~ 42 (373)
T 3lwb_A 8 DRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRR 42 (373)
T ss_dssp TTCEEEEEEEEC-----CHHHHHHHHHHHHSCTTT
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 89877999968677406999999999999755508
No 264
>3op6_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp}
Probab=24.35 E-value=37 Score=14.61 Aligned_cols=41 Identities=22% Similarity=0.111 Sum_probs=28.3
Q ss_pred HHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCE
Q ss_conf 99999999809982654530103879999889876535982
Q gi|254780157|r 21 KYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFK 61 (165)
Q Consensus 21 ~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~ 61 (165)
++..+.|++++|+|+..---+-+|.++..++.........+
T Consensus 5 ~~l~~~L~~~~i~y~~~~h~~~~t~e~~a~~~~~~~~~~~K 45 (152)
T 3op6_A 5 KKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAHVSGKQLAK 45 (152)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTCCHHHHC----CCSSCCEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCHHHEEE
T ss_conf 99999999779982999769989899999880999669489
No 265
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A*
Probab=24.21 E-value=37 Score=14.59 Aligned_cols=39 Identities=23% Similarity=0.459 Sum_probs=25.3
Q ss_pred EEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE------HHCCHHHHHHHH
Q ss_conf 99588169899999999999809982654530------103879999889
Q gi|254780157|r 9 IIMGSQSDWKIMKYAADMLDTLGIDYEARIIS------AHRTPDRLIEFA 52 (165)
Q Consensus 9 Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~S------AHR~p~~l~~~~ 52 (165)
||.||.|-... +.|+.+|++|++.... ..-+|..+...+
T Consensus 5 lILaS~S~~R~-----~lL~~~gi~f~v~~~~idE~~~~~~~p~~~~~~l 49 (189)
T 1ex2_A 5 LILASQSPRRK-----ELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWL 49 (189)
T ss_dssp EEECCCCHHHH-----HHHHTTCCCCEECCCCCCCCCCTTSCHHHHHHHH
T ss_pred EEEECCCHHHH-----HHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 89975899999-----9998689997996899898888889989999999
No 266
>2z0x_A Putative uncharacterized protein TTHA1699; protein-cyssa complex, translation, structural genomics, NPPSFA; HET: 5CA; 1.64A {Thermus thermophilus} PDB: 2z0k_A* 2cx5_A*
Probab=23.90 E-value=37 Score=14.56 Aligned_cols=51 Identities=14% Similarity=0.036 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHHCCCCE-EEE-EEEHHCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 69899999999999809982-654-5301038799998898765359829999
Q gi|254780157|r 15 SDWKIMKYAADMLDTLGIDY-EAR-IISAHRTPDRLIEFAKNARFEGFKLIIA 65 (165)
Q Consensus 15 SD~~~~~~a~~~L~~~gI~~-~~~-V~SAHR~p~~l~~~~~~~~~~~~~viIa 65 (165)
|+.|..+.....|++.||+| ++. .-..+++.+..-++......+-++-++.
T Consensus 2 ~~~~~~~~v~~~L~~~gi~~~~i~~~~~~~~t~~~~A~~lg~~~~~i~Ktlv~ 54 (158)
T 2z0x_A 2 SLSPSARRVQGALETRGFGHLKVVELPASTRTAKEAAQAVGAEVGQIVKSLVF 54 (158)
T ss_dssp CCCHHHHHHHHHHHHTTCTTSCEEECSSCCSSHHHHHHHHTCCGGGEEEEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHEEEEEEE
T ss_conf 98879999999998679995079989997585999998819997898878899
No 267
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, short chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=23.75 E-value=38 Score=14.54 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHH--CCCEEEEEEECCC
Q ss_conf 989999999999980998265453010387999988987653--5982999972676
Q gi|254780157|r 16 DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARF--EGFKLIIAGAGGA 70 (165)
Q Consensus 16 D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~--~~~~viIa~AG~a 70 (165)
+....++..+.++++|..+....+ =.+.++.+.++++...+ ..++++|..||..
T Consensus 55 ~~~~~~~~~~~l~~~g~~~~~~~~-Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAG~~ 110 (274)
T 1ja9_A 55 SSKAAEEVVAELKKLGAQGVAIQA-DISKPSEVVALFDKAVSHFGGLDFVMSNSGME 110 (274)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC-CTTSHHHHHHHHHHHHHHHSCEEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 878999999999973995899982-48999999999999999829987999786036
No 268
>2b4y_A NAD-dependent deacetylase sirtuin-5; histone deacetylase, structural genomics, structural genomics consortium, SGC, hydrolase; HET: APR EPE; 1.90A {Homo sapiens} SCOP: c.31.1.5 PDB: 2nyr_A*
Probab=23.73 E-value=38 Score=14.54 Aligned_cols=26 Identities=31% Similarity=0.393 Sum_probs=17.3
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 87999988987653598299997267668
Q gi|254780157|r 44 TPDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 44 ~p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
+.+.+.++++++ .--||+++||+|.+
T Consensus 8 ~~~~~~~~i~~a---k~ivv~TGAGiSt~ 33 (271)
T 2b4y_A 8 SMADFRKFFAKA---KHIVIISGAGVSAE 33 (271)
T ss_dssp CHHHHHHHHHHC---SEEEEEECGGGGGG
T ss_pred HHHHHHHHHHHC---CCEEEEECHHHHHH
T ss_conf 899999999858---95899957054063
No 269
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=23.28 E-value=38 Score=14.48 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=75.2
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECCCC-CCHHHHHH-HC
Q ss_conf 87499995881698999999999998099826545301038799998898765359829999726766-85113465-22
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGGAA-HLPGMIAA-MT 81 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~aa-aLpgvva~-~t 81 (165)
-.+++|+.-|..-.+.+++..+.|...++....+-.+.. .+.++.+ ..+.-+||..+|-.- .+++.+.. .+
T Consensus 8 ~k~IAIi~~t~~G~~la~~l~~~L~~~~~~~~~~~~~~~----~l~~~f~---~yda~IfI~A~GI~VR~IAP~l~dK~~ 80 (336)
T 3eeq_A 8 WRGICIISASEDAFSAGETIKEKLKSFEIPVVHYRYKDA----EIETIWK---CYDAIVFVMALEGATRIVCKYAKSKTE 80 (336)
T ss_dssp TTCEEEEECSHHHHHHHHHHHHHHHHTTCCEEEEEGGGC----CHHHHTT---TCSEEEEESCHHHHHHHHHHHCCCTTT
T ss_pred HCCEEEEEECHHHHHHHHHHHHHCCCCCCCCEECCCCHH----HHHHHHH---CCCEEEEEECHHHHHHHHHHHHCCCCC
T ss_conf 467499998975899999999875624654300224458----8999873---088599994448999985555337776
Q ss_pred CCCEEEE--------CCCCCCCCCCCCHHHHH-HCCCCCCCEEEECCCCCCHHHHHHHH
Q ss_conf 4203661--------25776667500169984-03569862044316753122899999
Q gi|254780157|r 82 SLPVLGV--------PIISQTLGGIDSLLSIV-QMPAGVPVGTMAIGQSGAINASLLAV 131 (165)
Q Consensus 82 ~~PVIgV--------P~~~~~~~G~dallS~v-qMP~Gvpvatv~vg~~~~~NAal~A~ 131 (165)
+=+||-| |..+|. +|-..|-.-+ +.-.+.||-|.+-+..+...--.+|-
T Consensus 81 DPaVvvvDe~G~~vIsLLsGH-gGAN~La~~iA~~lga~pVITTAtD~~~~~a~D~~a~ 138 (336)
T 3eeq_A 81 DPAIVCIDDKINYVIPLLGGH-WGANDIARELSVILNSTPIITTAAEIKGKLSIERIAN 138 (336)
T ss_dssp CCEEEEECTTCCEEEEEECTT-TTHHHHHHHHHHHTTCEECCC-------CCCHHHHHH
T ss_pred CCCEEEECCCCCEEEECCCCC-HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHH
T ss_conf 996899928999999715776-5499999999987198489957843357866545455
No 270
>1xp2_A EAD500, PLY500, L-alanyl-D-glutamate peptidase; hydrolase; 1.80A {Bacteriophage A500} PDB: 2vo9_A
Probab=23.26 E-value=38 Score=14.48 Aligned_cols=60 Identities=15% Similarity=0.114 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHH---HCCCCEEEEEEEHHCCHHHHHHHHHHHHHC-CCEEEEEEECCCCCCHHHH
Q ss_conf 9899999999999---809982654530103879999889876535-9829999726766851134
Q gi|254780157|r 16 DWKIMKYAADMLD---TLGIDYEARIISAHRTPDRLIEFAKNARFE-GFKLIIAGAGGAAHLPGMI 77 (165)
Q Consensus 16 D~~~~~~a~~~L~---~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~-~~~viIa~AG~aaaLpgvv 77 (165)
+-.+.+...+.++ +-|| .+.|.|++|+.++=.++.+....+ +..+.-+-.|.|.|..|..
T Consensus 34 ~~~~~~al~~~~~~a~~~Gi--~l~I~sgyRs~e~Q~~Ly~~g~~~~g~~~~~a~~g~S~H~~G~A 97 (179)
T 1xp2_A 34 YKITSDKTRNVIKKMAKEGI--YLCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGVA 97 (179)
T ss_dssp CHHHHHHHHHHHHHHHTTTC--CEEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTCE
T ss_pred CHHHHHHHHHHHHHHHHCCC--EEEEEEEEECHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCC
T ss_conf 99999999999999997898--49998775199999999996155678714437999775698556
No 271
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=23.19 E-value=39 Score=14.47 Aligned_cols=23 Identities=22% Similarity=0.462 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 99988987653598299997267668
Q gi|254780157|r 47 RLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 47 ~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
++.+.+++. ...|++++||+|.+
T Consensus 4 ~l~~~i~~a---~~ivvltGAGiS~~ 26 (249)
T 1m2k_A 4 KLLKTIAES---KYLVALTGAGVSAE 26 (249)
T ss_dssp HHHHHHHTC---SSEEEEECGGGGGG
T ss_pred HHHHHHHHC---CCEEEEECCHHHHH
T ss_conf 999999869---93899978133120
No 272
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=23.17 E-value=26 Score=15.56 Aligned_cols=24 Identities=13% Similarity=0.410 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 999988987653598299997267668
Q gi|254780157|r 46 DRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 46 ~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
+++.+++++. ..-|++++||+|+.
T Consensus 4 ~~~~~~l~~~---~~ivvlTGAGiSt~ 27 (246)
T 1yc5_A 4 KEFLDLLNES---RLTVTLTGAGISTP 27 (246)
T ss_dssp HHHHHHHHHC---SSEEEEECGGGTGG
T ss_pred HHHHHHHHHC---CCEEEEECCHHCCC
T ss_conf 9999999858---96899978111201
No 273
>1lxn_A Hypothetical protein MTH1187; hypothetical structure, structural genomics, PSI, protein structure initiative; 2.30A {Methanothermobacterthermautotrophicus} SCOP: d.58.48.1
Probab=22.98 E-value=39 Score=14.44 Aligned_cols=50 Identities=26% Similarity=0.278 Sum_probs=33.4
Q ss_pred EEEEE---CCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH-C--CHHHHHHHHHHHH
Q ss_conf 99995---8816989999999999980998265453010-3--8799998898765
Q gi|254780157|r 7 VAIIM---GSQSDWKIMKYAADMLDTLGIDYEARIISAH-R--TPDRLIEFAKNAR 56 (165)
Q Consensus 7 V~Ii~---GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAH-R--~p~~l~~~~~~~~ 56 (165)
+.|+- |++|=-++..++.+.|++.|++|++.-.+-- - +.+++.+.++.+.
T Consensus 6 i~i~Pig~~~~svs~yVa~~i~~i~~sgl~y~~~pmgT~IEge~~dev~~~ik~~~ 61 (99)
T 1lxn_A 6 LTVIPLGTCSTSLSSYVAAAVEALKKLNVRYEISGMGTLLEAEDLDELMEAVKAAH 61 (99)
T ss_dssp EEEEESSCSSSCCHHHHHHHHHHHTTSSCEEEEETTEEEEEESSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCHHHHHHHHHHHH
T ss_conf 99975799997589999999999997599837468841797797999999999999
No 274
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=22.91 E-value=39 Score=14.43 Aligned_cols=14 Identities=7% Similarity=0.188 Sum_probs=5.7
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780157|r 137 DDKELTDRLNEWRT 150 (165)
Q Consensus 137 ~d~~i~~kl~~~r~ 150 (165)
+-+++.+++++|=+
T Consensus 155 Y~~~v~~~~~~~~~ 168 (273)
T 2xed_A 155 YMRPLAEKVVAYLE 168 (273)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
T ss_conf 97899999999999
No 275
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, PSI, MCSG; 2.00A {Saccharomyces cerevisiae}
Probab=22.88 E-value=39 Score=14.43 Aligned_cols=64 Identities=20% Similarity=0.155 Sum_probs=35.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE----------------------EHHCCHHHHHHHHHHHHH--CCCE
Q ss_conf 4999958816989999999999980998265453----------------------010387999988987653--5982
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARII----------------------SAHRTPDRLIEFAKNARF--EGFK 61 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~----------------------SAHR~p~~l~~~~~~~~~--~~~~ 61 (165)
||++|.|+.| -+...+++.|-+.|-...+.-. .=-..++.+.++.+...+ ..++
T Consensus 3 Kv~lITGas~--GIG~aia~~la~~Ga~v~v~~~~r~~~~l~~l~~~~~~~~~~~~~Dvt~~~~~~~~~~~~~~~~g~id 80 (254)
T 3kzv_A 3 KVILVTGVSR--GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID 80 (254)
T ss_dssp CEEEECSTTS--HHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCC--HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 9899947775--99999999999779988999726999999999997099479998128999999999999999739977
Q ss_pred EEEEEECCCC
Q ss_conf 9999726766
Q gi|254780157|r 62 LIIAGAGGAA 71 (165)
Q Consensus 62 viIa~AG~aa 71 (165)
++|..||...
T Consensus 81 ilvnnAG~~~ 90 (254)
T 3kzv_A 81 SLVANAGVLE 90 (254)
T ss_dssp EEEEECCCCC
T ss_pred EEEEECCCCC
T ss_conf 4466133478
No 276
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=22.87 E-value=39 Score=14.43 Aligned_cols=104 Identities=16% Similarity=0.138 Sum_probs=53.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE---------------EEEEHHCCHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 874999958816989999999999980998265---------------45301038799998898765359829999726
Q gi|254780157|r 4 APPVAIIMGSQSDWKIMKYAADMLDTLGIDYEA---------------RIISAHRTPDRLIEFAKNARFEGFKLIIAGAG 68 (165)
Q Consensus 4 ~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~---------------~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG 68 (165)
.+||.||=||+ ...+.+...+++|+.+.+ .+..-++.++.+.++++. .++++++...+
T Consensus 11 ~~kvlIiG~Gq----lgr~~a~Aak~lG~~v~~~~~~~~~p~~~~ad~~~~~~~~D~e~l~~~a~~---~~~d~v~~~~e 83 (391)
T 1kjq_A 11 ATRVMLLGSGE----LGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVEL---EKPHYIVPEIE 83 (391)
T ss_dssp CCEEEEESCSH----HHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHH---HCCSEEEECSS
T ss_pred CCEEEEECCCH----HHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCEEEEECCCCHHHHHHHHHH---HCCCEEEECCC
T ss_conf 98999989789----999999999987998999979999836762663698368899999999998---49999992777
Q ss_pred CCCCCHHHHHHHCC--CCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEE
Q ss_conf 76685113465224--2036612577666750016998403569862044
Q gi|254780157|r 69 GAAHLPGMIAAMTS--LPVLGVPIISQTLGGIDSLLSIVQMPAGVPVGTM 116 (165)
Q Consensus 69 ~aaaLpgvva~~t~--~PVIgVP~~~~~~~G~dallS~vqMP~Gvpvatv 116 (165)
+-+..++..... +|+++-+.......+-..+..-..---|+|++.-
T Consensus 84 --~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~k~~~k~~~~~~~ipt~~~ 131 (391)
T 1kjq_A 84 --AIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRLAAEELQLPTSTY 131 (391)
T ss_dssp --CSCHHHHHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCE
T ss_pred --CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf --456899999996597107981999998761899987665158884013
No 277
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3ma4_A
Probab=22.67 E-value=39 Score=14.40 Aligned_cols=47 Identities=15% Similarity=0.273 Sum_probs=31.0
Q ss_pred CCCEEEEE--ECCCC----CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHH
Q ss_conf 88749999--58816----9899999999999809982654530103879999
Q gi|254780157|r 3 IAPPVAII--MGSQS----DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLI 49 (165)
Q Consensus 3 ~~pkV~Ii--~GS~S----D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~ 49 (165)
.+|++-.. .+|+. |=|+..++...|++.||+|+.......+.|+.+.
T Consensus 4 ~~~~~~l~~~a~~~~~~~~~CPf~~rv~i~L~ekgi~~e~~~vd~~~~~~~~~ 56 (241)
T 1k0m_A 4 EQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQ 56 (241)
T ss_dssp --CCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTTSCCHHHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
T ss_conf 99846998646899886899957999999999839998799857788989999
No 278
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=22.62 E-value=40 Score=14.40 Aligned_cols=65 Identities=22% Similarity=0.221 Sum_probs=36.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCC---------------------EEEEEEEHHCCHHHHHHHHHHHHH--CC
Q ss_conf 8874999958816989999999999980998---------------------265453010387999988987653--59
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGID---------------------YEARIISAHRTPDRLIEFAKNARF--EG 59 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~---------------------~~~~V~SAHR~p~~l~~~~~~~~~--~~ 59 (165)
.+-||++|.|+.+-+ ...+++.|-+-|.. +....+ =-+.++.+.++.++..+ ..
T Consensus 27 L~GKvalVTGas~GI--G~aiA~~la~~Ga~V~~~~~~~~~l~~~~~~~~~~~~~~~~-Dvt~~~~v~~~~~~~~~~~G~ 103 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGI--GLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRV-DVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp CTTCEEEETTTTSTH--HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEEC-CTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCCHH--HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEE-ECCCHHHHHHHHHHHHHHCCC
T ss_conf 999989993878789--99999999987999999979889999999982996489996-389999999999999997399
Q ss_pred CEEEEEEECCC
Q ss_conf 82999972676
Q gi|254780157|r 60 FKLIIAGAGGA 70 (165)
Q Consensus 60 ~~viIa~AG~a 70 (165)
++++|..||..
T Consensus 104 iDiLVnNAG~~ 114 (277)
T 3gvc_A 104 VDKLVANAGVV 114 (277)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
T ss_conf 98999899889
No 279
>3fz9_A Glutaredoxin; oxidoreductase; HET: GSH; 1.70A {Populus tremula x populus tremuloides} PDB: 3fza_A*
Probab=22.45 E-value=40 Score=14.38 Aligned_cols=74 Identities=9% Similarity=0.152 Sum_probs=43.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCC-HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCC
Q ss_conf 499995881698999999999998099826545301038-7999988987653598299997267668511346522420
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRT-PDRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLP 84 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~-p~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~P 84 (165)
+|.|.+- +.=|+..++...|+.+||+|...-..-++. ...+.+.+... .+..+.|
T Consensus 19 ~Vvvysk--~~Cp~C~~ak~lL~~~~i~~~~~~id~~~~~~~~~~~~l~~~----------------------tg~~tvP 74 (112)
T 3fz9_A 19 PVVVYSK--TWCSYSSEVKSLFKRLNVDPLVVELDELGAQGPQIQKVLERL----------------------TGQHTVP 74 (112)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHH----------------------HSCCSSC
T ss_pred CEEEEEC--CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH----------------------CCCCCCC
T ss_conf 8899989--989489999999997699746999871566799999999995----------------------6998898
Q ss_pred EEEECCCCCCCCCCCCHHHHH
Q ss_conf 366125776667500169984
Q gi|254780157|r 85 VLGVPIISQTLGGIDSLLSIV 105 (165)
Q Consensus 85 VIgVP~~~~~~~G~dallS~v 105 (165)
+|=+ .+...+|.|-|..+.
T Consensus 75 ~vfi--~g~~IGG~~dl~~l~ 93 (112)
T 3fz9_A 75 NVFI--GGKHIGGCTDTVKLY 93 (112)
T ss_dssp EEEE--TTEEEESHHHHHHHH
T ss_pred EEEE--CCEEEECHHHHHHHH
T ss_conf 5889--998980779999999
No 280
>3i1j_A Oxidoreductase, short chain dehydrogenase/reductase family; dimer, mixed alpha-beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV}
Probab=22.40 E-value=40 Score=14.37 Aligned_cols=28 Identities=21% Similarity=0.239 Sum_probs=19.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 887499995881698999999999998099
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGI 32 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI 32 (165)
++-||++|.|+.| -+...+++.|-+.|.
T Consensus 12 L~gKvalITGas~--GIG~aiA~~la~~Ga 39 (247)
T 3i1j_A 12 LKGRVILVTGAAR--GIGAAAARAYAAHGA 39 (247)
T ss_dssp TTTCEEEESSTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
T ss_conf 6969899968475--999999999998799
No 281
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=22.35 E-value=40 Score=14.36 Aligned_cols=104 Identities=14% Similarity=0.067 Sum_probs=56.5
Q ss_pred HHHHHHCCCCEEEEEEEHHCCH-HHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCCCCCC----
Q ss_conf 9999980998265453010387-99998898765359829999726766851134652242036612577666750----
Q gi|254780157|r 24 ADMLDTLGIDYEARIISAHRTP-DRLIEFAKNARFEGFKLIIAGAGGAAHLPGMIAAMTSLPVLGVPIISQTLGGI---- 98 (165)
Q Consensus 24 ~~~L~~~gI~~~~~V~SAHR~p-~~l~~~~~~~~~~~~~viIa~AG~aaaLpgvva~~t~~PVIgVP~~~~~~~G~---- 98 (165)
...|+++|+.|.+-=-|-+|.. ++..+.++.+...|.++++|+.--. -.--++....=+|++-|.-.-..|.
T Consensus 78 ~~~l~~~g~~~viigHsErR~~~~e~~~~v~~a~~~gl~~IvCvge~~---e~~~~~~l~~~iIayEp~waIGtg~~~~~ 154 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPDPR---TSLAAAALGPHAVAVEPPELIGTGRAVSR 154 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHTCCSEEEECCGGGTTTSCCHHH
T ss_pred HHHHHHCCCCEEEECCHHHHHHHCHHHHHHHHHHHCCCEEEEECCCCH---HHHHHCCCCCEEEEEEEHHEECCCCCCCH
T ss_conf 999987599799974368776510068999999988998999758719---98863036870899830200148878886
Q ss_pred ---CCHHHHHH----CCCCCCCEEEECCCCCCHHHHHHHHH
Q ss_conf ---01699840----35698620443167531228999999
Q gi|254780157|r 99 ---DSLLSIVQ----MPAGVPVGTMAIGQSGAINASLLAVA 132 (165)
Q Consensus 99 ---dallS~vq----MP~Gvpvatv~vg~~~~~NAal~A~~ 132 (165)
+.+...++ .-+.+|+..- -|+.. .|+.-++.+
T Consensus 155 ~~~~~i~~~i~~ik~~~~~v~vlyG-GgV~~-~n~~~~~~~ 193 (226)
T 1w0m_A 155 YKPEAIVETVGLVSRHFPEVSVITG-AGIES-GDDVAAALR 193 (226)
T ss_dssp HCHHHHHHHHHHHHHHCTTSEEEEE-SSCCS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEE-CCCCC-HHHHHHHHC
T ss_conf 5589999999998501788159996-57476-679999855
No 282
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B}
Probab=22.17 E-value=40 Score=14.34 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=24.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 88749999588169899999999999809982
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDY 34 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~ 34 (165)
++-|+++|.|..+..-+...+++.|.+.|...
T Consensus 12 L~gK~alITGaa~s~GIG~aiA~~la~~Ga~V 43 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAEL 43 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 47998999899876089999999999869999
No 283
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A
Probab=22.07 E-value=41 Score=14.33 Aligned_cols=54 Identities=15% Similarity=0.299 Sum_probs=37.9
Q ss_pred EEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 999958-8169899999999999809982654530103879999889876535982999972
Q gi|254780157|r 7 VAIIMG-SQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGA 67 (165)
Q Consensus 7 V~Ii~G-S~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A 67 (165)
++|-.| -.+++|-.++..+.|+..||.. +|+-++ .++-|.. +...+++|++++-
T Consensus 1 igv~yg~~~~nlps~~~Vv~llk~~gi~~-VRlY~~--d~~vL~A----~~~~gi~v~lgv~ 55 (306)
T 1aq0_A 1 IGVCYGMSANNLPAASTVVSMFKSNGIKS-MRLYAP--NQAALQA----VGGTGINVVVGAP 55 (306)
T ss_dssp CEEECCCCCSSCCCHHHHHHHHHHHTCCE-EEESSC--CHHHHHH----HTTSCCEEEEEEC
T ss_pred CEEECCCCCCCCCCHHHHHHHHHHCCCCE-EEEECC--CHHHHHH----HHHCCCEEEEECC
T ss_conf 94658876788979999999999679898-998389--9799998----8764996999536
No 284
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.90 E-value=41 Score=14.30 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=43.3
Q ss_pred CEEEEEECCCC-----CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHH-HCCCEEEEEEECCCCCC
Q ss_conf 74999958816-----98999999999998099826545301038799998898765-35982999972676685
Q gi|254780157|r 5 PPVAIIMGSQS-----DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNAR-FEGFKLIIAGAGGAAHL 73 (165)
Q Consensus 5 pkV~Ii~GS~S-----D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~-~~~~~viIa~AG~aaaL 73 (165)
.+|+||.=|++ |. -..-....|++.|.+...+.. ....++.+.+.+.... ..+++++|+..|-+..-
T Consensus 11 ~rvavitvsD~rg~~~D~-nGp~L~~~l~~~G~~v~~~~i-v~Dd~~~~~~~l~~~~~~~~~dlIiTtGGtg~g~ 83 (172)
T 1mkz_A 11 TRIAILTVSNRRGEEDDT-SGHYLRDSAQEAGHHVVDKAI-VKENRYAIRAQVSAWIASDDVQVVLITGGTGLTE 83 (172)
T ss_dssp CEEEEEEECSSCCGGGCH-HHHHHHHHHHHTTCEEEEEEE-ECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSST
T ss_pred CEEEEEEEECCCCCCCCC-HHHHHHHHHHHCCCEEEEEEE-CCCCHHHHHHHHHHHHHCCCCCEEEECCCEECCC
T ss_conf 689999984898867667-399999999985995776310-5885799999999987625676158525313477
No 285
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Vibrio parahaemolyticus AQ3810}
Probab=21.81 E-value=41 Score=14.29 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=28.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHH
Q ss_conf 49999588169899999999999809982654530103879999889876
Q gi|254780157|r 6 PVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 6 kV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~ 55 (165)
|+.+|.|++| -+....++.|.+.|.. +.++ =|.++++.+..++.
T Consensus 2 kiVlITGass--GIG~a~A~~la~~G~~--V~l~--~R~~~~l~~~~~~~ 45 (230)
T 3guy_A 2 SLIVITGASS--GLGAELAKLYDAEGKA--TYLT--GRSESKLSTVTNCL 45 (230)
T ss_dssp -CEEEESTTS--HHHHHHHHHHHHTTCC--EEEE--ESCHHHHHHHHHTC
T ss_pred CEEEEECCCC--HHHHHHHHHHHHCCCE--EEEE--ECCHHHHHHHHHHH
T ss_conf 9999918771--9999999999987998--9999--89999999999985
No 286
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=21.73 E-value=29 Score=15.29 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=21.0
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHCCCCEEEE
Q ss_conf 5982999972676685113465224203661
Q gi|254780157|r 58 EGFKLIIAGAGGAAHLPGMIAAMTSLPVLGV 88 (165)
Q Consensus 58 ~~~~viIa~AG~aaaLpgvva~~t~~PVIgV 88 (165)
+..+.+|+.-++..||+ +.+..|+|++
T Consensus 260 ~~a~l~I~~Dtg~~HlA----aalg~p~v~l 286 (348)
T 1psw_A 260 AACKAIVTNDSGLMHVA----AALNRPLVAL 286 (348)
T ss_dssp HTSSEEEEESSHHHHHH----HHTTCCEEEE
T ss_pred HCCCEEECCCCHHHHHH----HHCCCCEEEE
T ss_conf 51636752797599999----9809998999
No 287
>1umq_A Photosynthetic apparatus regulatory protein; DNA-binding protein, response regulator, DNA binding domain, helix-turn-helix; NMR {Rhodobacter sphaeroides} SCOP: a.4.1.12
Probab=21.54 E-value=26 Score=15.59 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=18.2
Q ss_pred HHHHHHHCCCHHHHHHHHHHH
Q ss_conf 999997069999999999999
Q gi|254780157|r 129 LAVAILALDDKELTDRLNEWR 149 (165)
Q Consensus 129 ~A~~Il~~~d~~i~~kl~~~r 149 (165)
-|++.|+++-..|+.||++|.
T Consensus 59 ~AAr~LGIsR~TLyrklkky~ 79 (81)
T 1umq_A 59 ETARRLNMHRRTLQRILAKRS 79 (81)
T ss_dssp HHHHHHTSCHHHHHHHHHTSS
T ss_pred HHHHHHCCCHHHHHHHHHHCC
T ss_conf 999997989999999999728
No 288
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=21.39 E-value=42 Score=14.24 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=30.3
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEH-HCC
Q ss_conf 99887499995881698999999999998099826545301-038
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISA-HRT 44 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SA-HR~ 44 (165)
|.|+... .+.++ ..-|...++...|++.||+|+..-... ++.
T Consensus 1 ~~~~~~m-~Ly~~-~~sp~~~rv~i~L~e~gi~ye~~~v~~~~~~ 43 (216)
T 3lyk_A 1 MSLRSVM-TLFSN-KDDIYCHQVKIVLAEKGVLYENAEVDLQALP 43 (216)
T ss_dssp -----CE-EEEEC-TTCHHHHHHHHHHHHHTCCCEEEECCTTSCC
T ss_pred CCCCCCE-EEECC-CCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 9988826-77669-9986899999999993997779975856498
No 289
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=21.35 E-value=42 Score=14.23 Aligned_cols=36 Identities=8% Similarity=0.140 Sum_probs=16.9
Q ss_pred HHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHH
Q ss_conf 999999999809982654530103879999889876
Q gi|254780157|r 20 MKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 20 ~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~ 55 (165)
.+.-.+..+++||+++....+..-+.+++.+.++..
T Consensus 51 v~~K~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~L 86 (288)
T 1b0a_A 51 VASKRKACEEVGFVSRSYDLPETTSEAELLELIDTL 86 (288)
T ss_dssp HHHHHHHHHHHTCEECCEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 999999998659659999789999999999999998
No 290
>3jwp_A Transcriptional regulatory protein SIR2 homologue; malaria, transcription regulation, structural genomics, structural genomics consortium; HET: AMP PGE; 2.65A {Plasmodium falciparum}
Probab=21.10 E-value=42 Score=14.20 Aligned_cols=26 Identities=23% Similarity=0.399 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 87999988987653598299997267668
Q gi|254780157|r 44 TPDRLIEFAKNARFEGFKLIIAGAGGAAH 72 (165)
Q Consensus 44 ~p~~l~~~~~~~~~~~~~viIa~AG~aaa 72 (165)
+.+++.+++++. ..-|++++||+|..
T Consensus 9 tie~la~~l~~~---k~ivvlTGAGiSt~ 34 (265)
T 3jwp_A 9 TLEELAKIIKKC---KHVVALTGSGTSAE 34 (265)
T ss_dssp CHHHHHHHHHHC---SCEEEEECGGGTGG
T ss_pred HHHHHHHHHHHC---CCEEEEECCEEEHH
T ss_conf 799999999839---95899978774440
No 291
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar binding protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=20.93 E-value=43 Score=14.18 Aligned_cols=39 Identities=26% Similarity=0.339 Sum_probs=25.4
Q ss_pred HHHHHCCCEEEEEEECCCCCCHHHHHHHC---------CCCEEEECCC
Q ss_conf 87653598299997267668511346522---------4203661257
Q gi|254780157|r 53 KNARFEGFKLIIAGAGGAAHLPGMIAAMT---------SLPVLGVPII 91 (165)
Q Consensus 53 ~~~~~~~~~viIa~AG~aaaLpgvva~~t---------~~PVIgVP~~ 91 (165)
.+.-.++-++|+++.|.+++.+.-.+... .+|+|....+
T Consensus 35 ~~~~~~~~kI~~~GnGgSa~~A~h~a~~l~~~~~~~r~~l~ai~l~~~ 82 (196)
T 2yva_A 35 VQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTD 82 (196)
T ss_dssp HHHHHTTCCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCC
T ss_pred HHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
T ss_conf 999987998999988672889999999986610025667048972677
No 292
>1gdt_A GD resolvase, protein (gamma delta resolvase); protein-DNA complex, double helix, overhanging base, DNA binding protein/DNA complex; 3.00A {Escherichia coli} SCOP: a.4.1.2 c.53.1.1 PDB: 1zr4_A 1zr2_A 2gm4_A 1res_A 1ret_A
Probab=20.79 E-value=43 Score=14.16 Aligned_cols=53 Identities=17% Similarity=0.170 Sum_probs=21.3
Q ss_pred ECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 58816989999999999980998265453010387999988987653598299
Q gi|254780157|r 11 MGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLI 63 (165)
Q Consensus 11 ~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~vi 63 (165)
+|++.|-|-.++....++.+.+=....+.-..|++..+..+++.++..+..++
T Consensus 39 Sg~~~~R~~~~~ll~~~~~gd~ivv~~l~Rl~R~~~~~~~~~~~l~~~~v~l~ 91 (183)
T 1gdt_A 39 SGSSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIR 91 (183)
T ss_dssp CCSSSCCHHHHHHHHHCCTTCEEEESSGGGTCSSHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE
T ss_conf 25346663066641204799989996234020217999999999875120205
No 293
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630}
Probab=20.71 E-value=43 Score=14.15 Aligned_cols=58 Identities=19% Similarity=0.118 Sum_probs=39.1
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 998874999958816989999999999980998265453010387999988987653598299997267
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIAGAGG 69 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~AG~ 69 (165)
|+++.||.|+ +.|....+-....|++.|..+ ..|+ +.++..+.++ .+.++++|.=-.|
T Consensus 1 M~~~~kILiV---DDd~~~~~~l~~~L~~~g~~v----~~a~-~~~eal~~l~---~~~~dlillD~~m 58 (136)
T 2qzj_A 1 MSLQTKILII---DGDKDNCQKLKGFLEEKGISI----DLAY-NCEEAIGKIF---SNKYDLIFLEIIL 58 (136)
T ss_dssp ---CCEEEEE---CSCHHHHHHHHHHHHTTTCEE----EEES-SHHHHHHHHH---HCCCSEEEEESEE
T ss_pred CCCCCEEEEE---ECCHHHHHHHHHHHHHCCCEE----EEEC-CHHHHHHHHH---HCCCCEEEECCCC
T ss_conf 9967759999---899999999999999879999----9989-9999999886---2799999977999
No 294
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA; 1.70A {Aquifex aeolicus VF5} PDB: 2qq1_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=20.68 E-value=43 Score=14.14 Aligned_cols=127 Identities=15% Similarity=0.130 Sum_probs=65.2
Q ss_pred CCEEEEEECCCC------CHHHHHHHHHHHHHCCCC-EEEEEEEHHCCHHHHHHHHHH-HHHCCCEEEEEEECCCCCCHH
Q ss_conf 874999958816------989999999999980998-265453010387999988987-653598299997267668511
Q gi|254780157|r 4 APPVAIIMGSQS------DWKIMKYAADMLDTLGID-YEARIISAHRTPDRLIEFAKN-ARFEGFKLIIAGAGGAAHLPG 75 (165)
Q Consensus 4 ~pkV~Ii~GS~S------D~~~~~~a~~~L~~~gI~-~~~~V~SAHR~p~~l~~~~~~-~~~~~~~viIa~AG~aaaLpg 75 (165)
+.+|+||.=|++ +=.-...+.+.|+++|+. +++...-.....+.+.+-+.+ ...+++++||+-.|-. --+-
T Consensus 5 ~~~v~VitvSD~~~~g~~~D~sG~~l~e~L~~~g~~~~~v~~~iVpDd~~~I~~~l~~~~~~~~~dlIiTTGGtG-~~~r 83 (178)
T 2pbq_A 5 KAVIGVVTISDRASKGIYEDISGKAIIDYLKDVIITPFEVEYRVIPDERDLIEKTLIELADEKGCSLILTTGGTG-PAPR 83 (178)
T ss_dssp CCEEEEEEECHHHHHTSSCCHHHHHHHHHHHHHBCSCCEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCS-SSTT
T ss_pred CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCC-CCCC
T ss_conf 636999995767547887777689999999983788718889996886799999999998737983899736654-7888
Q ss_pred HHHHHCCCCEEEECCCCC---------CCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 346522420366125776---------66750016998403569862044316753122899999997
Q gi|254780157|r 76 MIAAMTSLPVLGVPIISQ---------TLGGIDSLLSIVQMPAGVPVGTMAIGQSGAINASLLAVAIL 134 (165)
Q Consensus 76 vva~~t~~PVIgVP~~~~---------~~~G~dallS~vqMP~Gvpvatv~vg~~~~~NAal~A~~Il 134 (165)
=+.-....|++-....+= ...+. +.|| +.-.|+-=.|..++..|.-+|+..+.+++
T Consensus 84 DvTpea~~~~~~k~ipG~~e~~r~~s~~~~~~-A~lS--Ra~aGi~~~tlI~~LPGsp~av~~~l~~i 148 (178)
T 2pbq_A 84 DVTPEATEAVCEKMLPGFGELMRQVSLKQVPT-AILS--RQTAGIRGSCLIVNLPGKPQSIKVCLDAV 148 (178)
T ss_dssp CCHHHHHHHHCSEECHHHHHHHHHHHHTTCGG-GGGC--CCCEEEETTEEEEEECSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCC-EEEC--CCCHHHCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 78998998745224873899999975375887-7871--53132009989998799878999999999
No 295
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=20.62 E-value=43 Score=14.13 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=28.1
Q ss_pred EECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHH
Q ss_conf 9588169899999999999809982654530103879999
Q gi|254780157|r 10 IMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLI 49 (165)
Q Consensus 10 i~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~ 49 (165)
++=|.++=|...++...|++.||+|+..-+.- .++...
T Consensus 4 ~vYt~~~Cp~C~~~k~~L~~~~i~y~~~~i~~--~~~~~~ 41 (75)
T 1r7h_A 4 TLYTKPACVQCTATKKALDRAGLAYNTVDISL--DDEARD 41 (75)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCCEEEETTT--CHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCEEEEECCC--CHHHHH
T ss_conf 99948999769999999802499449997468--989999
No 296
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C}
Probab=20.50 E-value=44 Score=14.12 Aligned_cols=54 Identities=9% Similarity=0.121 Sum_probs=33.8
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 99887499995881698999999999998099826545301038799998898765359829999
Q gi|254780157|r 1 MNIAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNARFEGFKLIIA 65 (165)
Q Consensus 1 m~~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~~~~~~~viIa 65 (165)
||..|.|.|+ +-|..+.+-....|+.+|+.. ..++ +.....+.. ....++++|.
T Consensus 3 ~~~~p~VLIV---DDd~~~r~~l~~~L~~~g~~v----~~a~-~~~eal~~l---~~~~~d~vil 56 (136)
T 3kto_A 3 LNHHPIIYLV---DHQKDARAALSKLLSPLDVTI----QCFA-SAESFMRQQ---ISDDAIGMII 56 (136)
T ss_dssp ----CEEEEE---CSCHHHHHHHHHHHTTSSSEE----EEES-SHHHHTTSC---CCTTEEEEEE
T ss_pred CCCCCEEEEE---ECCHHHHHHHHHHHHHCCCEE----EEEC-CHHHHHHHH---HHCCCCEEEE
T ss_conf 9999779999---799999999999999879999----9989-999999999---8479988999
No 297
>1wta_A 5'-methylthioadenosine phosphorylase; A/B structure, transferase; HET: ADE; 1.78A {Aeropyrum pernix K1}
Probab=20.41 E-value=35 Score=14.71 Aligned_cols=13 Identities=31% Similarity=0.447 Sum_probs=11.4
Q ss_pred CCCCEEEEEECCC
Q ss_conf 9887499995881
Q gi|254780157|r 2 NIAPPVAIIMGSQ 14 (165)
Q Consensus 2 ~~~pkV~Ii~GS~ 14 (165)
+++|+|+||.||-
T Consensus 9 ~~~p~igII~GSG 21 (275)
T 1wta_A 9 GVRAHVGVIGGSG 21 (275)
T ss_dssp TCCCSEEEEECGG
T ss_pred CCCCCEEEEECCC
T ss_conf 9998589991788
No 298
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=20.41 E-value=44 Score=14.11 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=32.0
Q ss_pred EEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHH
Q ss_conf 99958816989999999999980998265453010387999988
Q gi|254780157|r 8 AIIMGSQSDWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEF 51 (165)
Q Consensus 8 ~Ii~GS~SD~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~ 51 (165)
.-+.++ ..-|..+++...|++.||+|+.......+.+....++
T Consensus 11 mkLY~~-~~sP~~~rv~i~L~e~gi~~e~~~i~~~~~~~~~~~~ 53 (213)
T 1yy7_A 11 MTLFSG-PTDIFSHQVRIVLAEKGVSVEIEQVEADNLPQDLIDL 53 (213)
T ss_dssp EEEEEC-TTCHHHHHHHHHHHHHTCCEEEEECCTTSCCHHHHHH
T ss_pred EEEECC-CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
T ss_conf 588799-9984799999999992996679976845188999975
No 299
>1xhl_A Short-chain dehydrogenase/reductase family member (5L265), putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.21 E-value=44 Score=14.08 Aligned_cols=66 Identities=15% Similarity=0.211 Sum_probs=34.8
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEE--------------------------EEEEEHHCCHHHHHHHHHHHH
Q ss_conf 887499995881698999999999998099826--------------------------545301038799998898765
Q gi|254780157|r 3 IAPPVAIIMGSQSDWKIMKYAADMLDTLGIDYE--------------------------ARIISAHRTPDRLIEFAKNAR 56 (165)
Q Consensus 3 ~~pkV~Ii~GS~SD~~~~~~a~~~L~~~gI~~~--------------------------~~V~SAHR~p~~l~~~~~~~~ 56 (165)
.+-||++|.|+.| -+...+++.|-+.|...- ..+..=-+.++.+.+++++..
T Consensus 24 L~GKvalVTGas~--GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~~~v~~~~~Dvs~~~~v~~~~~~~~ 101 (297)
T 1xhl_A 24 FSGKSVIITGSSN--GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp CTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 8998899947786--89999999999879989999899999999999999748987636899800899999999999999
Q ss_pred H--CCCEEEEEEECCC
Q ss_conf 3--5982999972676
Q gi|254780157|r 57 F--EGFKLIIAGAGGA 70 (165)
Q Consensus 57 ~--~~~~viIa~AG~a 70 (165)
+ ..++++|..||..
T Consensus 102 ~~~G~iDiLVnnAG~~ 117 (297)
T 1xhl_A 102 AKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9829987899888656
No 300
>1vki_A Hypothetical protein ATU3699; 15159614, structural genomics, JCSG, PSI, protein structure initiative; 1.60A {Agrobacterium tumefaciens str} SCOP: d.116.1.1
Probab=20.12 E-value=44 Score=14.07 Aligned_cols=40 Identities=18% Similarity=0.077 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHH
Q ss_conf 9899999999999809982654530103879999889876
Q gi|254780157|r 16 DWKIMKYAADMLDTLGIDYEARIISAHRTPDRLIEFAKNA 55 (165)
Q Consensus 16 D~~~~~~a~~~L~~~gI~~~~~V~SAHR~p~~l~~~~~~~ 55 (165)
.....+++...|++.||+|+..---+-+|-++..++....
T Consensus 17 ~~~t~~~v~~~L~~~gI~y~~~~H~~~~T~eea~~~~~~~ 56 (181)
T 1vki_A 17 SRKTATELFEFLDGLGISHTTKQHEPVFTVAESQSLRDLI 56 (181)
T ss_dssp CCCCHHHHHHHHHHHTCCCEEEECCCCCSHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCC
T ss_conf 8879999999999879975999668758799997644899
No 301
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=20.08 E-value=45 Score=14.06 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=41.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEE---------------------EEEEEHHCCHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 698999999999998099826---------------------54530103879999889876535982999972
Q gi|254780157|r 15 SDWKIMKYAADMLDTLGIDYE---------------------ARIISAHRTPDRLIEFAKNARFEGFKLIIAGA 67 (165)
Q Consensus 15 SD~~~~~~a~~~L~~~gI~~~---------------------~~V~SAHR~p~~l~~~~~~~~~~~~~viIa~A 67 (165)
+....+++....|+++||.+. ..+-+-.-+++.+.++++.+..+|++||+=+-
T Consensus 261 ty~~~a~~lldYLk~LGvt~I~LmPi~e~p~~~~wGY~~~~y~a~d~~~Gt~~dfk~LVd~aH~~GI~VILDvV 334 (722)
T 3k1d_A 261 SYRQLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWV 334 (722)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 77898998999999819988997986558998887878556678340139999999999988765969999875
Done!