HHsearch alignment for GI: 254780158 and conserved domain: CHL00194
>CHL00194 ycf39 Ycf39; Provisional.
Probab=97.50 E-value=0.0035 Score=41.30 Aligned_cols=116 Identities=13% Similarity=0.089 Sum_probs=75.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEECCCCCHHHHHHHHHHCCEEEEC----------
Q ss_conf 8999809-89899999999887978999967677713--4226827987899999999997419999987----------
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAARHDDIKALNTFADICDYATYE---------- 71 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E---------- 71 (354)
T Consensus 2 ~ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v~gDl~dpesl~~Al~GvdaVi~~~~~~~~~~~~ 81 (319)
T CHL00194 2 SLLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELVYGDLSLPETIPPALEGITAIIDASTSRPSDLNN 81 (319)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCH
T ss_conf 79998998589999999999688908999578676323421596799942788778999965996799945667788620
Q ss_pred CCCCCHH----HHHHHH-HCCC--CCCCH------HHHHHHHCCHHHHHHHHHCCCCCCCCC
Q ss_conf 7222113----334443-0200--34876------778763152788888765058867432
Q gi|254780158|r 72 SENIPEK----SISYLS-TLLP--TYPSS------RAIEISQDRLYEKKFFQESGLTTVDFY 120 (354)
Q Consensus 72 ~E~i~~~----~l~~l~-~~~~--v~P~~------~al~~~~dK~~~K~~l~~~gipt~~~~ 120 (354)
T Consensus 82 ~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga~~~~~~p~~~~K~~~E~~L~~Sgl~~TIlR 143 (319)
T CHL00194 82 AYQIDLEGKLALIEAAKAAKVKRFIFFSILNAEQYPQVPLMKIKSDIEEKLKQSGINYTIFR 143 (319)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 88988988999999999849988999613566668875677879999999986799859984