HHsearch alignment for GI: 254780158 and conserved domain: CHL00194

>CHL00194 ycf39 Ycf39; Provisional.
Probab=97.50  E-value=0.0035  Score=41.30  Aligned_cols=116  Identities=13%  Similarity=0.089  Sum_probs=75.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEECCCCCHHHHHHHHHHCCEEEEC----------
Q ss_conf             8999809-89899999999887978999967677713--4226827987899999999997419999987----------
Q gi|254780158|r    5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAARHDDIKALNTFADICDYATYE----------   71 (354)
Q Consensus         5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E----------   71 (354)
T Consensus         2 ~ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v~gDl~dpesl~~Al~GvdaVi~~~~~~~~~~~~   81 (319)
T CHL00194          2 SLLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELVYGDLSLPETIPPALEGITAIIDASTSRPSDLNN   81 (319)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCH
T ss_conf             79998998589999999999688908999578676323421596799942788778999965996799945667788620


Q ss_pred             CCCCCHH----HHHHHH-HCCC--CCCCH------HHHHHHHCCHHHHHHHHHCCCCCCCCC
Q ss_conf             7222113----334443-0200--34876------778763152788888765058867432
Q gi|254780158|r   72 SENIPEK----SISYLS-TLLP--TYPSS------RAIEISQDRLYEKKFFQESGLTTVDFY  120 (354)
Q Consensus        72 ~E~i~~~----~l~~l~-~~~~--v~P~~------~al~~~~dK~~~K~~l~~~gipt~~~~  120 (354)
T Consensus        82 ~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga~~~~~~p~~~~K~~~E~~L~~Sgl~~TIlR  143 (319)
T CHL00194         82 AYQIDLEGKLALIEAAKAAKVKRFIFFSILNAEQYPQVPLMKIKSDIEEKLKQSGINYTIFR  143 (319)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             88988988999999999849988999613566668875677879999999986799859984