HHsearch alignment for GI: 254780158 and conserved domain: COG1038

>COG1038 PycA Pyruvate carboxylase [Energy production and conversion].
Probab=99.97  E-value=8.6e-29  Score=213.72  Aligned_cols=300  Identities=17%  Similarity=0.180  Sum_probs=243.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEEC--------CCCCHHHHHHHHHH--CCEEE
Q ss_conf             887899980989899999999887978999967677713--4226827987--------89999999999741--99999
Q gi|254780158|r    2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAA--------RHDDIKALNTFADI--CDYAT   69 (354)
Q Consensus         2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~--------~~~D~~~l~~~~~~--~Dvit   69 (354)
T Consensus         6 ~~~KvLVANRgEIAIRvFRAa~ELgi~TVAIys~ED~~S~HR~KADEsY~iG~~~~Pi~aYL~IdeII~iAk~~gaDaIh   85 (1149)
T COG1038           6 KIKKVLVANRGEIAIRVFRAANELGIKTVAIYSEEDRLSLHRFKADESYLIGEGKGPVEAYLSIDEIIRIAKRSGADAIH   85 (1149)
T ss_pred             HHHEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCHHHHCCHHHHHHHHHHCCCCEEC
T ss_conf             10202550453366999998886086489985144543044303551066067887268743299999999970887313


Q ss_pred             E----CCCCCCHHHHHHHHH-C-CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEE
Q ss_conf             8----772221133344430-2-0034876778763152788888765058867432--100068888641001312554
Q gi|254780158|r   70 Y----ESENIPEKSISYLST-L-LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGIL  141 (354)
Q Consensus        70 ~----E~E~i~~~~l~~l~~-~-~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vl  141 (354)
T Consensus        86 PGYGfLSEn~ef--A~~c~eaGI~FIGP~~e~ld~~GdKv~Ar~~A~~agvPvipgt~~~~~~~ee~~~fa~~~gyPvmi  163 (1149)
T COG1038          86 PGYGFLSENPEF--ARACAEAGITFIGPKPEVLDMLGDKVKARNAAIKAGVPVIPGTDGPIETIEEALEFAEEYGYPVMI  163 (1149)
T ss_pred             CCCCCCCCCHHH--HHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf             784324479899--999997597896888799988442888999999759985569999821299999999866985899


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEE-ECCCCCCCCCC
Q ss_conf             0234675556645446746778987--------51355501011114564433201014665413997-05334543555
Q gi|254780158|r  142 KTRRLGYDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICFY-DPIQNTHVNGI  212 (354)
Q Consensus       142 Kp~~~GydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~-p~~en~~~~gi  212 (354)
T Consensus       164 KA~~GG-GGRGMR~vr~~~~l~~~~~~AksEAkaAFG~~eVyvEk~ve~pkHIEVQiLgD~~GnvvHLfERDCSvQRRhQ  242 (1149)
T COG1038         164 KAAAGG-GGRGMRVVRSEADLAEAFERAKSEAKAAFGNDEVYVEKLVENPKHIEVQILGDTHGNVVHLFERDCSVQRRHQ  242 (1149)
T ss_pred             EECCCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCHHHCCC
T ss_conf             971479-8665266258889999999988999974189806656552486526899860577878888623553310144


Q ss_pred             EEEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHH
Q ss_conf             058985278-7878999999998867754024677531045538840899941257045604621001358899999998
Q gi|254780158|r  213 LHKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSI  291 (354)
Q Consensus       213 l~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai  291 (354)
T Consensus       243 KVVE~APa~~L~~~~R~~ic~~Avkla~~~~Y~~AGTvEFLvd~~~~fyFIEvNPRiQVEHTiTE~vTgiDIV~aQi~ia  322 (1149)
T COG1038         243 KVVEVAPAPYLSPELRDEICDDAVKLARNIGYINAGTVEFLVDEDGKFYFIEVNPRIQVEHTITEEITGIDIVKAQIHIA  322 (1149)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEEEECHHHHHHHHHHH
T ss_conf             03785688889999999999999999997397656647888738886899995473456776455441216788789885


Q ss_pred             HCCCCCCCHHCCC
Q ss_conf             1889997000485
Q gi|254780158|r  292 TNLPLGNPNRHSN  304 (354)
Q Consensus       292 ~glpl~~~~~~~~  304 (354)
T Consensus       323 ~G~~l~~~e~glp  335 (1149)
T COG1038         323 AGATLHTPELGLP  335 (1149)
T ss_pred             CCCCCCCCCCCCC
T ss_conf             3565687445997