HHsearch alignment for GI: 254780158 and conserved domain: COG1038
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion].
Probab=99.97 E-value=8.6e-29 Score=213.72 Aligned_cols=300 Identities=17% Similarity=0.180 Sum_probs=243.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEEC--------CCCCHHHHHHHHHH--CCEEE
Q ss_conf 887899980989899999999887978999967677713--4226827987--------89999999999741--99999
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAA--------RHDDIKALNTFADI--CDYAT 69 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~--------~~~D~~~l~~~~~~--~Dvit 69 (354)
T Consensus 6 ~~~KvLVANRgEIAIRvFRAa~ELgi~TVAIys~ED~~S~HR~KADEsY~iG~~~~Pi~aYL~IdeII~iAk~~gaDaIh 85 (1149)
T COG1038 6 KIKKVLVANRGEIAIRVFRAANELGIKTVAIYSEEDRLSLHRFKADESYLIGEGKGPVEAYLSIDEIIRIAKRSGADAIH 85 (1149)
T ss_pred HHHEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCHHHHCCHHHHHHHHHHCCCCEEC
T ss_conf 10202550453366999998886086489985144543044303551066067887268743299999999970887313
Q ss_pred E----CCCCCCHHHHHHHHH-C-CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEE
Q ss_conf 8----772221133344430-2-0034876778763152788888765058867432--100068888641001312554
Q gi|254780158|r 70 Y----ESENIPEKSISYLST-L-LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGIL 141 (354)
Q Consensus 70 ~----E~E~i~~~~l~~l~~-~-~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vl 141 (354)
T Consensus 86 PGYGfLSEn~ef--A~~c~eaGI~FIGP~~e~ld~~GdKv~Ar~~A~~agvPvipgt~~~~~~~ee~~~fa~~~gyPvmi 163 (1149)
T COG1038 86 PGYGFLSENPEF--ARACAEAGITFIGPKPEVLDMLGDKVKARNAAIKAGVPVIPGTDGPIETIEEALEFAEEYGYPVMI 163 (1149)
T ss_pred CCCCCCCCCHHH--HHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 784324479899--999997597896888799988442888999999759985569999821299999999866985899
Q ss_pred ECCCCCCCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEE-ECCCCCCCCCC
Q ss_conf 0234675556645446746778987--------51355501011114564433201014665413997-05334543555
Q gi|254780158|r 142 KTRRLGYDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICFY-DPIQNTHVNGI 212 (354)
Q Consensus 142 Kp~~~GydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~-p~~en~~~~gi 212 (354)
T Consensus 164 KA~~GG-GGRGMR~vr~~~~l~~~~~~AksEAkaAFG~~eVyvEk~ve~pkHIEVQiLgD~~GnvvHLfERDCSvQRRhQ 242 (1149)
T COG1038 164 KAAAGG-GGRGMRVVRSEADLAEAFERAKSEAKAAFGNDEVYVEKLVENPKHIEVQILGDTHGNVVHLFERDCSVQRRHQ 242 (1149)
T ss_pred EECCCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCHHHCCC
T ss_conf 971479-8665266258889999999988999974189806656552486526899860577878888623553310144
Q ss_pred EEEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHH
Q ss_conf 058985278-7878999999998867754024677531045538840899941257045604621001358899999998
Q gi|254780158|r 213 LHKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSI 291 (354)
Q Consensus 213 l~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai 291 (354)
T Consensus 243 KVVE~APa~~L~~~~R~~ic~~Avkla~~~~Y~~AGTvEFLvd~~~~fyFIEvNPRiQVEHTiTE~vTgiDIV~aQi~ia 322 (1149)
T COG1038 243 KVVEVAPAPYLSPELRDEICDDAVKLARNIGYINAGTVEFLVDEDGKFYFIEVNPRIQVEHTITEEITGIDIVKAQIHIA 322 (1149)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEEEECHHHHHHHHHHH
T ss_conf 03785688889999999999999999997397656647888738886899995473456776455441216788789885
Q ss_pred HCCCCCCCHHCCC
Q ss_conf 1889997000485
Q gi|254780158|r 292 TNLPLGNPNRHSN 304 (354)
Q Consensus 292 ~glpl~~~~~~~~ 304 (354)
T Consensus 323 ~G~~l~~~e~glp 335 (1149)
T COG1038 323 AGATLHTPELGLP 335 (1149)
T ss_pred CCCCCCCCCCCCC
T ss_conf 3565687445997