HHsearch alignment for GI: 254780158 and conserved domain: COG1250

Probab=92.92  E-value=0.15  Score=30.29  Aligned_cols=75  Identities=15%  Similarity=0.141  Sum_probs=46.4

Q ss_pred             ECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHH-H-CCCCHHHHHHHHHHCC
Q ss_conf             5278-78789999999988677540246775310455388408999412570456046210-0-1358899999998188
Q gi|254780158|r  218 VPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEA-S-CVISQFEQHIRSITNL  294 (354)
Q Consensus       218 ~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~-~-~~~sqfe~h~rai~gl  294 (354)
T Consensus       154 I~g~~T~~e~~~~~~~~~~~igK~---~-vv~~----D~p-GFi~NRil~~~~~eA~~l~~eGva~~e~ID~~~~~~~G~  224 (307)
T COG1250         154 IRGEKTSDETVERVVEFAKKIGKT---P-VVVK----DVP-GFIVNRLLAALLNEAIRLLEEGVATPEEIDAAMRQGLGL  224 (307)
T ss_pred             ECCCCCCHHHHHHHHHHHHHCCCC---C-EEEC----CCC-CEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf             168878999999999999985998---8-7426----788-612577789999999999980899999999999863699


Q ss_pred             CCCCCHH
Q ss_conf             9997000
Q gi|254780158|r  295 PLGNPNR  301 (354)
Q Consensus       295 pl~~~~~  301 (354)
T Consensus       225 pmGpf~l  231 (307)
T COG1250         225 PMGPFEL  231 (307)
T ss_pred             CCCHHHH
T ss_conf             7658888