HHsearch alignment for GI: 254780158 and conserved domain: PRK03562

Probab=96.95  E-value=0.0035  Score=41.28  Aligned_cols=132  Identities=12%  Similarity=0.139  Sum_probs=90.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC--HHHCCCEEEECCCCCHHHHHHHH-HHCCEEEECCCCCCHHHHH
Q ss_conf             89998098989999999988797899996767771--34226827987899999999997-4199999877222113334
Q gi|254780158|r    5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP--ANQVSNQQIAARHDDIKALNTFA-DICDYATYESENIPEKSIS   81 (354)
Q Consensus         5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p--a~~~ad~~~~~~~~D~~~l~~~~-~~~Dvit~E~E~i~~~~l~   81 (354)
T Consensus       401 ~VII~G~GRvGq~var~L~~~gi~~vviD~d~~~V~~~r~~G~~v~yGDat~~~vL~~AGi~~Ar~vViaidd-~~~~~~  479 (615)
T PRK03562        401 RVIIAGFGRFGQIVGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD-PQTNLQ  479 (615)
T ss_pred             CEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEEEEECC-HHHHHH
T ss_conf             9899902804699999999789987999799999999996799089768999999986791406889999498-999999


Q ss_pred             HHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHCCCCE
Q ss_conf             44302003487677876315278888876505886743210-0068888641001312
Q gi|254780158|r   82 YLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEI-NSQESLTNILGGFKGK  138 (354)
Q Consensus        82 ~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v-~s~~el~~~~~~~g~P  138 (354)
T Consensus       480 iv~~~r~~~P~l~IiaRard~~~~~~L~-~~Ga~~vv~Et~essL~l~~~~L~~lG~~  536 (615)
T PRK03562        480 LTELVKEHFPHLQIIARARDVDHYIRLR-QAGVEKPERETFEGALKSGRLALESLGLG  536 (615)
T ss_pred             HHHHHHHHCCCCEEEEEECCHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHHHHCCCC
T ss_conf             9999997589986999839778899999-78999896665899999999999980999