HHsearch alignment for GI: 254780158 and conserved domain: PRK05294
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=100.00 E-value=2.8e-30 Score=223.76 Aligned_cols=294 Identities=16% Similarity=0.221 Sum_probs=183.8
Q ss_pred CCCEEEEECCC-----H------HHHHHHHHHHHCCCEEEEEECCCCCCHHH--CCCEEEECCCCCHHHHHHHH--HHCC
Q ss_conf 88789998098-----9------89999999988797899996767771342--26827987899999999997--4199
Q gi|254780158|r 2 KKKTIGIIGGG-----Q------LARMLSMSAARLGFCTVILDPDSNCPANQ--VSNQQIAARHDDIKALNTFA--DICD 66 (354)
Q Consensus 2 ~~k~IgIlG~G-----q------L~rml~~aA~~lG~~v~v~d~~~~~pa~~--~ad~~~~~~~~D~~~l~~~~--~~~D 66 (354)
T Consensus 552 ~~~kvlvlGsGp~rIGqgiEFDY~~v~a~~alk~~G~~~imIN~NPETVSTD~d~sDrLYFEpl-t~E~V~~I~~~E~p~ 630 (1063)
T PRK05294 552 DRKKVMILGGGPNRIGQGIEFDYCCVHAALALREAGYETIMVNCNPETVSTDYDTSDRLYFEPL-TLEDVLEIIEKEKPK 630 (1063)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEECCC-CHHHHHHHHHHHCCC
T ss_conf 8863799657773204442300679999999996598158953781111156566761454368-899999999975898
Q ss_pred EEEECCC-CCCHHHHHHHHH-CCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 9998772-221133344430-20034-87677876315278888876505886743210006888864100131255402
Q gi|254780158|r 67 YATYESE-NIPEKSISYLST-LLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKT 143 (354)
Q Consensus 67 vit~E~E-~i~~~~l~~l~~-~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp 143 (354)
T Consensus 631 gvi~qfGGQt~~nla~~L~~~g~~ilGts~~~Id~aEDR~~F~~~l~~l~i~qp~~~~a~s~~ea~~~a~~iGyPvlvRP 710 (1063)
T PRK05294 631 GVIVQFGGQTPLKLAKALEAAGVPILGTSPDAIDLAEDRERFQKLLEKLGIKQPPNGTATSVEEALEIAEEIGYPVLVRP 710 (1063)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCEEECC
T ss_conf 79997388367899999998799477788788787875888999998659999997076689999999986498668434
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHHH----CCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCC----CCEE
Q ss_conf 34-67555664544674677898751----355501011114564433201014665413997053345435----5505
Q gi|254780158|r 144 RR-LGYDGKGQKVYHENDCTQNLYAS----LGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVN----GILH 214 (354)
Q Consensus 144 ~~-~GydGkG~~~i~~~~~l~~~~~~----~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~----gil~ 214 (354)
T Consensus 711 SyVL--GG~~M~iv~~~~eL~~yl~~a~~vs~~~pvlIdkfl~ga~E~eVDai~Dg~-~v~I~gImEHIE~AGVHSGDS~ 787 (1063)
T PRK05294 711 SYVL--GGRAMEIVYDEEELERYMREAVKVSPDHPVLIDRFLEDAIEVDVDAICDGE-DVLIGGIMEHIEEAGVHSGDSA 787 (1063)
T ss_pred CCCC--CCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEHHHHHCHHHHHHEEECCC-EEEEEEEEEECCCCCCCCCCCE
T ss_conf 3102--577147856999999999999863899977863543202454430231488-4899998720014575667842
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCC
Q ss_conf 89852787878999999998867754024677531045538840899941257045604621001358899999998188
Q gi|254780158|r 215 KSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNL 294 (354)
Q Consensus 215 ~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~gl 294 (354)
T Consensus 788 ~V~Pp~~Ls~~~~~~i~~~t~~ia~~l~v~G~~NiQf~v-k~~~vyVIE~NpRaSRtvPfvSKatg~pl~~iAtk~~lG~ 866 (1063)
T PRK05294 788 CSLPPYTLSEEIIDEIREQTKKLALELNVVGLMNVQFAV-KDDEVYVIEVNPRASRTVPFVSKATGVPLAKIAARVMLGK 866 (1063)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE-CCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHCCC
T ss_conf 881685589999999999999999855666642033554-0983899994474445304457641997999999998299
Q ss_pred CCCCCH
Q ss_conf 999700
Q gi|254780158|r 295 PLGNPN 300 (354)
Q Consensus 295 pl~~~~ 300 (354)
T Consensus 867 ~l~~l~ 872 (1063)
T PRK05294 867 KLAELG 872 (1063)
T ss_pred CHHHCC
T ss_conf 734427