>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase; InterPro: IPR004549 This family represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase (6.4.1.2 from EC) is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase (6.3.4.14 from EC), and two subunits of carboxyl transferase in a 2:2 complex. In the first step of long-chain fatty acid synthesis, biotin carboxylase catalyses the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-coA. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase). In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.; GO: 0016874 ligase activity.

Probab=100.00 E-value=9.6e-32 Score=233.59 Aligned_cols=316 Identities=19% Similarity=0.251 Sum_probs=252.5 Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC--CCCCHHHCCCEEEEC-------CCCCHHHHHHHHH--HCCEEE--- Q ss_conf 78999809898999999998879789999676--777134226827987-------8999999999974--199999--- Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPD--SNCPANQVSNQQIAA-------RHDDIKALNTFAD--ICDYAT--- 69 (354) Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~--~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~--~~Dvit--- 69 (354) T Consensus 3 ~K~lIANRGEIA~RIiRAC~ElGi~TVAVyS~aD~dalHV~LADEavCIGea~S~kSYL~IpnI~aAA~~tG~~AiHPGY 82 (451) T TIGR00514 3 DKILIANRGEIALRIIRACKELGIATVAVYSTADRDALHVLLADEAVCIGEAPSAKSYLNIPNIIAAAEITGADAIHPGY 82 (451) T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEECCCC T ss_conf 54899526067889999888649863986004413323434302530068622112441158899988774880762887 Q ss_pred -ECCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCC--C-CCCHHHHHHHHHHCCCCEEEEEC Q ss_conf -8772221133344430--2003487677876315278888876505886743--2-10006888864100131255402 Q gi|254780158|r 70 -YESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDF--Y-EINSQESLTNILGGFKGKGILKT 143 (354) Q Consensus 70 -~E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~--~-~v~s~~el~~~~~~~g~P~vlKp 143 (354) T Consensus 83 GFLSENA~FA--e~c~~~g~~FIGP~pe~Ir~MGDK~~A~~~mKkaGVP~VPGS~GP~~~~~~e~~~~A~~IGyPv~IKA 160 (451) T TIGR00514 83 GFLSENADFA--EICEDHGITFIGPSPEAIRLMGDKVTAKETMKKAGVPVVPGSDGPLVEDEEEAVRIAKEIGYPVIIKA 160 (451) T ss_pred CHHHHHHHHH--HHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCEEEEE T ss_conf 7344312478--89873882666787120112688689999997488766238888631027889999974789689996 Q ss_pred CCCCCCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCC-CCCE Q ss_conf 34675556645446746778987--------513555010111145644332010146654139970533-4543-5550 Q gi|254780158|r 144 RRLGYDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHV-NGIL 213 (354) Q Consensus 144 ~~~GydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~-~gil 213 (354) T Consensus 161 ~AGG-GGRGmR~vR~~~El~~~~~~a~~EA~AAF~N~~VYiEKfienPRH~E~QVLAD~~GN~vyLgERDCSiQRR~QKl 239 (451) T TIGR00514 161 TAGG-GGRGMRVVREEDELVKLIKAARAEAAAAFNNDGVYIEKFIENPRHVEIQVLADKYGNVVYLGERDCSIQRRNQKL 239 (451) T ss_pred ECCC-CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCHHCCCCCE T ss_conf 2589-972258862868999999999999974028796278633369940799987517888789712146200046544 Q ss_pred EEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCE-EEEEEECCCCCCCEE-EEHHHCCCCHHHHHHHH Q ss_conf 58985278-7878999999998867754024677531045538840-899941257045604-62100135889999999 Q gi|254780158|r 214 HKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGN-VIANEMAPRVHNSGH-WTEASCVISQFEQHIRS 290 (354) Q Consensus 214 ~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~-i~vnEiaPR~Hnsgh-~t~~~~~~sqfe~h~ra 290 (354) T Consensus 240 lE-EaPsP~Lt~ElR~~~G~~Av~aA~~iGY~GaGTvEFLld~~~~rFYFmEMNTRIQV-EHPVTEmvtGvDL~keQirv 317 (451) T TIGR00514 240 LE-EAPSPALTSELREKMGDAAVKAAKSIGYTGAGTVEFLLDKNGQRFYFMEMNTRIQV-EHPVTEMVTGVDLIKEQIRV 317 (451) T ss_pred EE-ECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCEEEEEEECCEEEE-EECCEEEEECHHHHHHHHHH T ss_conf 65-46888778899999989999999864980035168886258873577651760211-10320146002578889987 Q ss_pred HHCCCCC----CCHHCCCEEEEEEECCCCCCHHHHHCCCC Q ss_conf 8188999----70004856799975577022788972899 Q gi|254780158|r 291 ITNLPLG----NPNRHSNCVMYNIIGSDIDQYEQWLHCDS 326 (354) Q Consensus 291 i~glpl~----~~~~~~~~~m~nilg~~~~~~~~~~~~~~ 326 (354) T Consensus 318 A~G~~L~~kQe~v~~~GHaieCRINAED--P~~~F~PsPG 355 (451) T TIGR00514 318 AAGEKLSLKQEDVKLRGHAIECRINAED--PIKNFLPSPG 355 (451) T ss_pred HCCCCCCCCCCEEEEEEEEEEEEECCCC--CCCCCCCCCC T ss_conf 3789566431147999889986514558--7877868885

HHsearch alignment for GI: 254780158 and conserved domain: TIGR00514