HHsearch alignment for GI: 254780158 and conserved domain: TIGR02152
>TIGR02152 D_ribokin_bact ribokinase; InterPro: IPR011877 This entry describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family. ; GO: 0004747 ribokinase activity, 0006014 D-ribose metabolic process.
Probab=93.46 E-value=0.64 Score=26.09 Aligned_cols=144 Identities=17% Similarity=0.208 Sum_probs=91.3
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC---HHHC----CCEEEEC--------CCCCHHHHHHHHHHCCEEEE
Q ss_conf 9998098989999999988797899996767771---3422----6827987--------89999999999741999998
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP---ANQV----SNQQIAA--------RHDDIKALNTFADICDYATY 70 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p---a~~~----ad~~~~~--------~~~D~~~l~~~~~~~Dvit~ 70 (354)
T Consensus 58 ig~VG~D~~G~~~~~~l~~~Gi~t~~v~~~~~~~TG~A~I~V~~~G~N~I~v~~GAN~~l~~~~~~~~~~~i~~s~~~~~ 137 (303)
T TIGR02152 58 IGKVGDDAFGDELLENLKKEGIDTEYVKTVKDTPTGTAFIFVDDTGENRIVVVAGANAELTPEDIDAAEALIAESDIVLL 137 (303)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEE
T ss_conf 98634877899999999874861021167177776358999837888579880275645798899999987746888997
Q ss_pred CCCCCCHHHHHHH----H-HCCCCCCCHHHHHHHHCCHHH--HHHHHHCCCCCCC--------CCCCCHHHHHHHHHHCC
Q ss_conf 7722211333444----3-020034876778763152788--8887650588674--------32100068888641001
Q gi|254780158|r 71 ESENIPEKSISYL----S-TLLPTYPSSRAIEISQDRLYE--KKFFQESGLTTVD--------FYEINSQESLTNILGGF 135 (354)
Q Consensus 71 E~E~i~~~~l~~l----~-~~~~v~P~~~al~~~~dK~~~--K~~l~~~gipt~~--------~~~v~s~~el~~~~~~~ 135 (354)
T Consensus 138 QlE-iP~etv~~a~~~a~~~G~~viLNPAPA----~~~~~~m~e~l~~~D~i~PNEtEae~Ltg~~v~~~~~~~~AA~~L 212 (303)
T TIGR02152 138 QLE-IPLETVLEALKIAKKHGVKVILNPAPA----QKKLPKMDELLSLVDIIVPNETEAEILTGIEVTDEEDAEKAAEKL 212 (303)
T ss_pred ECC-CCHHHHHHHHHHHHHCCCCEEECCCCC----CCCCCHHHHHHHHCCEECCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 237-888999999999996589898668888----878754898986424644787999987399878989999999999
Q ss_pred ---CCE-EEEECCCCCCCCCCCCCCCCH
Q ss_conf ---312-554023467555664544674
Q gi|254780158|r 136 ---KGK-GILKTRRLGYDGKGQKVYHEN 159 (354)
Q Consensus 136 ---g~P-~vlKp~~~GydGkG~~~i~~~ 159 (354)
T Consensus 213 ~~~G~~~VIi---TLG~--kGa~~~~~~ 235 (303)
T TIGR02152 213 LEKGVKNVII---TLGS--KGALLVSKD 235 (303)
T ss_pred HHCCCEEEEE---EECC--CEEEEECCC
T ss_conf 8678406988---6547--367998089