HHsearch alignment for GI: 254780158 and conserved domain: TIGR02712
>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=99.97 E-value=3.6e-28 Score=209.52 Aligned_cols=289 Identities=16% Similarity=0.170 Sum_probs=238.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--CCHHHCCCEEEEC-------CCCCHHHHHHHHHHCC--EEE---
Q ss_conf 7899980989899999999887978999967677--7134226827987-------8999999999974199--999---
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN--CPANQVSNQQIAA-------RHDDIKALNTFADICD--YAT--- 69 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~--~pa~~~ad~~~~~-------~~~D~~~l~~~~~~~D--vit--- 69 (354)
T Consensus 2 ~~vLiANRGEIA~RiirTL~~lgi~sVAvYS~aD~~s~HV~~AD~A~~Lg~~~A~esYL~~dkil~~Ak~tGA~AI~PGY 81 (1226)
T TIGR02712 2 KTVLIANRGEIAVRIIRTLRKLGIRSVAVYSDADRASQHVLDADEAVCLGGATAAESYLDIDKILAIAKKTGAQAIHPGY 81 (1226)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCEECCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCC
T ss_conf 65677644379999999987718637986321002157823605026058954132221478999999755893874588
Q ss_pred -ECCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCC-CCCCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf -8772221133344430--200348767787631527888887650588674-321000688886410013125540234
Q gi|254780158|r 70 -YESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVD-FYEINSQESLTNILGGFKGKGILKTRR 145 (354)
Q Consensus 70 -~E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~-~~~v~s~~el~~~~~~~g~P~vlKp~~ 145 (354)
T Consensus 82 GFLSENA~FA--~~C~~aGI~FvGPtpe~ir~fGLKHtAR~lA~~aGVPL~PGTgLL~sl~eA~~~A~~IGYPVMlKSTA 159 (1226)
T TIGR02712 82 GFLSENAAFA--EACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGLLESLDEALEAAKEIGYPVMLKSTA 159 (1226)
T ss_pred CCCCCCHHHH--HHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 7235787799--89984795787787066744383256899999668898885155877999999986469954798707
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHC--------CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCC-CCCEEE
Q ss_conf 675556645446746778987513--------555010111145644332010146654139970533-4543-555058
Q gi|254780158|r 146 LGYDGKGQKVYHENDCTQNLYASL--------GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHV-NGILHK 215 (354)
Q Consensus 146 ~GydGkG~~~i~~~~~l~~~~~~~--------~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~-~gil~~ 215 (354)
T Consensus 160 GG-GGIGl~~c~~~~eL~~aFe~Vkrlg~~~F~daGVFlErfv~~ARHvEVQifGDG~G~v~aLGeRDCSLQRRNQKVvE 238 (1226)
T TIGR02712 160 GG-GGIGLQKCDNAAELAEAFETVKRLGESFFGDAGVFLERFVENARHVEVQIFGDGKGKVVALGERDCSLQRRNQKVVE 238 (1226)
T ss_pred CC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEE
T ss_conf 87-65245111898999999999899886323635143403203784289987526973369971167544445665587
Q ss_pred EEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CCEEEEEEECCCCCCCEE-EEHHHCCCCHHHHHHHHHH
Q ss_conf 985278-7878999999998867754024677531045538-840899941257045604-6210013588999999981
Q gi|254780158|r 216 SIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTN-DGNVIANEMAPRVHNSGH-WTEASCVISQFEQHIRSIT 292 (354)
Q Consensus 216 s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~-dg~i~vnEiaPR~Hnsgh-~t~~~~~~sqfe~h~rai~ 292 (354)
T Consensus 239 -ETPAP~LP~~~R~~L~~AA~~Lg~~V~YrSAGTVEFiYD~~~d~FYFLEVNTRLQV-EHPvTE~VtGlDLVEWM~r~AA 316 (1226)
T TIGR02712 239 -ETPAPNLPEETRAALLAAAEKLGEAVNYRSAGTVEFIYDEARDEFYFLEVNTRLQV-EHPVTEMVTGLDLVEWMVRIAA 316 (1226)
T ss_pred -ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCC-CCCCEEEEECCHHHHHHHHHHC
T ss_conf -27746864899999999999999971876376047740221087121132341113-3573017846408989999716
Q ss_pred CCCCC
Q ss_conf 88999
Q gi|254780158|r 293 NLPLG 297 (354)
Q Consensus 293 glpl~ 297 (354)
T Consensus 317 g~~p~ 321 (1226)
T TIGR02712 317 GELPD 321 (1226)
T ss_pred CCCCC
T ss_conf 88888