HHsearch alignment for GI: 254780158 and conserved domain: TIGR03589
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.03 E-value=0.53 Score=26.62 Aligned_cols=69 Identities=17% Similarity=0.176 Sum_probs=48.3
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHH-HCC-CEEEEEECCCCCCH---HHCC---CEEEECCCCCHHHHHHHHHHCCEEE
Q ss_conf 98878999809-898999999998-879-78999967677713---4226---8279878999999999974199999
Q gi|254780158|r 1 MKKKTIGIIGG-GQLARMLSMSAA-RLG-FCTVILDPDSNCPA---NQVS---NQQIAARHDDIKALNTFADICDYAT 69 (354)
Q Consensus 1 M~~k~IgIlG~-GqL~rml~~aA~-~lG-~~v~v~d~~~~~pa---~~~a---d~~~~~~~~D~~~l~~~~~~~Dvit 69 (354)
T Consensus 2 ~~~K~ILVTGGaGfIGS~lv~~Ll~~~~~~~iii~~~de~~~~~l~~~~~~~~i~f~~gDIrD~~~l~~~~~~vD~Vf 79 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVV 79 (324)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCEEE
T ss_conf 993999990797799999999999729982899966864032889851689875999677778899997634888999