HHsearch alignment for GI: 254780158 and conserved domain: cd01065
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=92.59 E-value=0.21 Score=29.37 Aligned_cols=36 Identities=33% Similarity=0.449 Sum_probs=30.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf 88789998098989999999988797-8999967677
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~ 37 (354)
T Consensus 18 ~~k~vlIlGaGGaarai~~aL~~~g~~~I~i~nR~~~ 54 (155)
T cd01065 18 KGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLE 54 (155)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 7999999867589999999999719982288608999