Query gi|254780158|ref|YP_003064571.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 354
No_of_seqs 233 out of 5824
Neff 7.4
Searched_HMMs 39220
Date Sun May 22 20:30:59 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780158.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01161 purK phosphoribosyla 100.0 0 0 903.1 29.1 349 5-353 1-380 (386)
2 PRK06019 phosphoribosylaminoim 100.0 0 0 888.6 35.3 351 1-352 5-356 (377)
3 COG0026 PurK Phosphoribosylami 100.0 0 0 859.8 32.4 350 3-352 1-353 (375)
4 PRK09288 purT phosphoribosylgl 100.0 0 0 804.7 34.9 349 2-352 11-375 (395)
5 COG0027 PurT Formate-dependent 100.0 0 0 570.6 26.6 346 4-351 13-374 (394)
6 pfam02222 ATP-grasp ATP-grasp 100.0 0 0 349.5 12.8 171 109-279 1-171 (171)
7 TIGR01142 purT phosphoribosylg 100.0 0 0 334.1 18.8 345 5-351 1-388 (407)
8 pfam02786 CPSase_L_D2 Carbamoy 100.0 7E-39 1.8E-43 281.6 15.8 198 101-299 1-211 (211)
9 PRK05586 biotin carboxylase; V 100.0 3.9E-36 9.9E-41 263.2 28.7 318 4-327 3-354 (447)
10 PRK08462 biotin carboxylase; V 100.0 4.1E-36 1E-40 263.0 26.8 319 2-327 3-355 (446)
11 PRK08654 pyruvate carboxylase 100.0 1.8E-35 4.7E-40 258.6 26.5 317 4-327 3-353 (497)
12 PRK06111 acetyl-CoA carboxylas 100.0 5.6E-35 1.4E-39 255.4 25.2 317 4-327 3-353 (449)
13 PRK08591 acetyl-CoA carboxylas 100.0 1.3E-34 3.3E-39 253.0 26.5 316 4-327 3-352 (449)
14 PRK12833 acetyl-CoA carboxylas 100.0 2.9E-34 7.4E-39 250.6 26.4 318 3-326 5-356 (458)
15 PRK12999 pyruvate carboxylase; 100.0 1.1E-33 2.8E-38 246.7 28.3 327 3-335 5-371 (1147)
16 PRK07178 acetyl-CoA carboxylas 100.0 8.4E-34 2.1E-38 247.4 27.2 317 4-327 3-352 (471)
17 PRK08463 acetyl-CoA carboxylas 100.0 3.5E-33 9E-38 243.2 27.9 322 4-331 3-358 (478)
18 PRK12767 carbamoyl phosphate s 100.0 1.7E-33 4.3E-38 245.4 24.0 290 5-307 3-309 (325)
19 TIGR01369 CPSaseII_lrg carbamo 100.0 2.9E-34 7.5E-39 250.5 19.2 293 3-300 573-894 (1089)
20 COG4770 Acetyl/propionyl-CoA c 100.0 8E-33 2E-37 240.9 25.3 333 4-343 3-368 (645)
21 COG0439 AccC Biotin carboxylas 100.0 7.8E-32 2E-36 234.2 27.0 308 4-315 3-344 (449)
22 TIGR01235 pyruv_carbox pyruvat 100.0 1.8E-32 4.5E-37 238.5 22.2 296 12-312 8-343 (1169)
23 TIGR00514 accC acetyl-CoA carb 100.0 9.6E-32 2.5E-36 233.6 21.2 316 4-326 3-355 (451)
24 PRK05294 carB carbamoyl phosph 100.0 2.8E-30 7.1E-35 223.8 24.7 294 2-300 552-872 (1063)
25 TIGR01369 CPSaseII_lrg carbamo 100.0 8.5E-31 2.2E-35 227.2 19.5 320 2-340 5-373 (1089)
26 PRK12815 carB carbamoyl phosph 100.0 1.5E-29 3.9E-34 218.8 24.7 294 4-299 8-334 (1068)
27 KOG0238 consensus 100.0 1E-29 2.6E-34 220.0 22.6 314 7-326 2-349 (670)
28 PRK07206 hypothetical protein; 100.0 1.7E-28 4.4E-33 211.7 27.6 333 3-344 2-374 (415)
29 PRK12815 carB carbamoyl phosph 100.0 7.8E-29 2E-33 214.0 25.1 294 2-300 553-870 (1068)
30 COG1038 PycA Pyruvate carboxyl 100.0 8.6E-29 2.2E-33 213.7 24.4 300 2-304 6-335 (1149)
31 PRK05294 carB carbamoyl phosph 100.0 2.3E-28 5.9E-33 210.8 25.1 294 3-299 7-335 (1063)
32 PRK01372 ddl D-alanine--D-alan 100.0 3.1E-29 7.9E-34 216.7 20.5 245 3-272 4-274 (304)
33 PRK02186 argininosuccinate lya 100.0 1.1E-28 2.9E-33 212.9 22.3 301 5-311 4-323 (892)
34 TIGR02712 urea_carbox urea car 100.0 3.6E-28 9.2E-33 209.5 24.3 289 4-297 2-321 (1226)
35 PRK01966 ddl D-alanyl-alanine 100.0 1.5E-28 3.8E-33 212.1 22.2 284 1-296 1-331 (344)
36 PRK13789 phosphoribosylamine-- 100.0 4.8E-27 1.2E-31 202.0 22.1 307 1-316 1-346 (426)
37 TIGR01205 D_ala_D_alaTIGR D-al 100.0 2.5E-27 6.4E-32 203.8 18.4 265 5-273 1-349 (375)
38 pfam07478 Dala_Dala_lig_C D-al 100.0 1.2E-27 3E-32 206.1 13.0 177 108-297 1-193 (201)
39 TIGR00877 purD phosphoribosyla 100.0 2.7E-26 6.8E-31 196.9 18.3 302 5-313 2-360 (459)
40 PRK00885 phosphoribosylamine-- 99.9 2.4E-25 6.1E-30 190.5 22.7 303 5-316 2-339 (424)
41 PRK13790 phosphoribosylamine-- 99.9 3.8E-25 9.6E-30 189.2 22.7 302 5-316 2-335 (415)
42 COG0151 PurD Phosphoribosylami 99.9 8.1E-25 2.1E-29 187.0 21.5 303 5-315 2-340 (428)
43 KOG0369 consensus 99.9 2.9E-24 7.3E-29 183.3 23.7 302 3-307 33-364 (1176)
44 PRK06395 phosphoribosylamine-- 99.9 1.3E-23 3.2E-28 178.9 22.4 305 4-316 3-343 (435)
45 COG0458 CarB Carbamoylphosphat 99.9 5.5E-23 1.4E-27 174.6 24.1 337 5-352 7-375 (400)
46 PRK05784 phosphoribosylamine-- 99.9 1.9E-22 4.9E-27 171.0 23.3 302 5-316 2-360 (485)
47 PRK06849 hypothetical protein; 99.9 1.5E-21 3.8E-26 165.0 23.5 278 2-296 3-298 (387)
48 pfam01071 GARS_A Phosphoribosy 99.9 3.3E-23 8.4E-28 176.1 12.3 166 100-269 1-189 (193)
49 pfam08443 RimK RimK-like ATP-g 99.9 1.6E-22 4E-27 171.6 10.1 171 99-284 1-183 (190)
50 KOG0370 consensus 99.9 2.9E-20 7.4E-25 156.3 20.1 298 3-304 918-1241(1435)
51 TIGR02144 LysX_arch Lysine bio 99.9 9.4E-21 2.4E-25 159.6 16.4 239 15-275 12-271 (289)
52 KOG2835 consensus 99.9 1E-23 2.7E-28 179.5 0.1 175 174-352 3-188 (373)
53 TIGR00768 rimK_fam alpha-L-glu 99.9 1E-20 2.6E-25 159.3 15.0 239 15-268 20-300 (321)
54 PRK10446 ribosomal protein S6 99.9 6.7E-20 1.7E-24 153.9 18.4 241 5-268 2-265 (300)
55 COG1181 DdlA D-alanine-D-alani 99.9 7.7E-20 2E-24 153.5 17.7 257 3-273 2-291 (317)
56 pfam02655 ATP-grasp_3 ATP-gras 99.8 5.2E-20 1.3E-24 154.6 10.6 155 99-271 1-160 (160)
57 KOG0368 consensus 99.8 1.7E-18 4.4E-23 144.3 17.8 291 4-300 55-409 (2196)
58 KOG0237 consensus 99.8 1.4E-18 3.5E-23 145.0 16.0 298 5-312 4-341 (788)
59 COG0189 RimK Glutathione synth 99.8 6.9E-17 1.7E-21 133.6 18.0 250 13-277 17-296 (318)
60 COG2232 Predicted ATP-dependen 99.7 1.3E-14 3.3E-19 118.3 20.0 279 4-313 12-318 (389)
61 KOG0370 consensus 99.7 5.4E-15 1.4E-19 120.8 15.6 296 3-300 377-703 (1435)
62 TIGR03103 trio_acet_GNAT GNAT- 99.6 2.2E-13 5.7E-18 109.9 16.4 179 91-273 287-527 (547)
63 PRK13278 purP 5-formaminoimida 99.6 1.3E-12 3.3E-17 104.8 18.4 268 2-282 17-324 (356)
64 TIGR02068 cya_phycin_syn cyano 99.5 1.5E-14 3.8E-19 117.9 6.5 99 92-192 209-313 (876)
65 COG1821 Predicted ATP-utilizin 99.5 3.8E-12 9.8E-17 101.6 16.7 249 15-296 23-284 (307)
66 COG1759 5-formaminoimidazole-4 99.5 2E-11 5.1E-16 96.8 17.3 268 4-283 19-330 (361)
67 PRK13277 5-formaminoimidazole- 99.4 3.5E-11 9E-16 95.1 17.4 269 2-283 13-332 (363)
68 COG3919 Predicted ATP-grasp en 99.4 8E-11 2E-15 92.7 16.4 273 1-283 1-304 (415)
69 PRK02471 bifunctional glutamat 99.3 5.7E-11 1.5E-15 93.7 14.0 97 93-191 481-583 (753)
70 PRK06524 biotin carboxylase-li 99.2 5.1E-10 1.3E-14 87.3 10.6 206 88-296 115-341 (480)
71 TIGR01016 sucCoAbeta succinyl- 99.0 1.7E-08 4.3E-13 77.1 12.5 209 103-312 6-267 (389)
72 PRK05246 glutathione synthetas 98.9 4E-08 1E-12 74.6 12.0 248 5-276 3-293 (316)
73 PRK00696 sucC succinyl-CoA syn 98.8 1.4E-07 3.6E-12 70.9 12.2 124 102-225 5-158 (388)
74 pfam08442 ATP-grasp_2 ATP-gras 98.8 1E-07 2.6E-12 71.9 10.9 157 103-268 5-201 (202)
75 PRK12458 glutathione synthetas 98.8 6E-07 1.5E-11 66.6 14.1 227 18-265 22-301 (349)
76 COG0045 SucC Succinyl-CoA synt 98.6 6.9E-07 1.8E-11 66.2 11.2 202 102-313 5-267 (387)
77 pfam02955 GSH-S_ATP Prokaryoti 98.6 4.3E-07 1.1E-11 67.6 9.9 132 116-265 12-159 (176)
78 pfam05770 Ins134_P3_kin Inosit 98.3 9.9E-05 2.5E-09 51.7 15.8 236 3-269 7-290 (307)
79 TIGR01380 glut_syn glutathione 98.2 3.4E-05 8.7E-10 54.8 11.2 228 15-264 20-291 (322)
80 TIGR02291 rimK_rel_E_lig alpha 98.1 4.4E-05 1.1E-09 54.1 9.3 182 98-294 34-295 (320)
81 pfam00289 CPSase_L_chain Carba 97.7 0.00012 3.1E-09 51.2 6.8 92 3-96 1-109 (109)
82 COG0111 SerA Phosphoglycerate 97.6 0.00028 7.3E-09 48.6 7.5 63 2-70 141-203 (324)
83 pfam02826 2-Hacid_dh_C D-isome 97.6 0.00034 8.6E-09 48.1 7.1 62 1-70 34-95 (176)
84 PRK00257 erythronate-4-phospha 97.5 0.00022 5.5E-09 49.4 5.8 59 2-70 115-173 (379)
85 COG0569 TrkA K+ transport syst 97.5 0.00038 9.8E-09 47.8 6.9 136 4-146 1-143 (225)
86 CHL00194 ycf39 Ycf39; Provisio 97.5 0.0035 8.9E-08 41.3 11.5 116 5-120 2-143 (319)
87 PRK08605 D-lactate dehydrogena 97.5 0.00045 1.1E-08 47.3 6.5 34 3-36 146-180 (332)
88 PRK13581 D-3-phosphoglycerate 97.4 0.0007 1.8E-08 46.0 7.2 62 2-71 137-199 (524)
89 PRK11790 D-3-phosphoglycerate 97.4 0.00039 9.9E-09 47.7 5.7 59 3-70 151-209 (409)
90 PRK13243 glyoxylate reductase; 97.4 0.0011 2.7E-08 44.8 7.6 33 263-296 282-317 (333)
91 PRK12480 D-lactate dehydrogena 97.4 0.00066 1.7E-08 46.2 6.5 60 2-70 145-204 (330)
92 PRK07574 formate dehydrogenase 97.2 0.0016 4E-08 43.6 6.9 89 8-102 50-155 (385)
93 PRK06487 glycerate dehydrogena 97.1 0.0035 9E-08 41.3 7.7 40 44-83 25-64 (317)
94 PRK08410 2-hydroxyacid dehydro 97.0 0.0022 5.5E-08 42.7 6.4 33 51-83 29-61 (311)
95 PRK03659 glutathione-regulated 97.0 0.0034 8.7E-08 41.4 7.3 132 5-138 402-537 (602)
96 pfam05368 NmrA NmrA-like famil 97.0 0.0055 1.4E-07 40.0 8.3 65 6-70 1-70 (232)
97 PRK03562 glutathione-regulated 96.9 0.0035 9E-08 41.3 6.8 132 5-138 401-536 (615)
98 pfam02254 TrkA_N TrkA-N domain 96.9 0.003 7.6E-08 41.8 6.2 106 6-114 1-109 (115)
99 pfam06849 DUF1246 Protein of u 96.9 0.01 2.6E-07 38.2 8.9 112 6-119 1-122 (124)
100 PRK06130 3-hydroxybutyryl-CoA 96.9 0.0036 9.3E-08 41.2 6.6 39 1-39 1-41 (310)
101 pfam02844 GARS_N Phosphoribosy 96.9 0.0038 9.7E-08 41.1 6.5 89 5-98 1-98 (99)
102 PRK06436 glycerate dehydrogena 96.8 0.0044 1.1E-07 40.6 6.5 59 2-70 121-179 (303)
103 PRK11199 tyrA bifunctional cho 96.8 0.0073 1.9E-07 39.1 7.5 94 3-117 98-194 (374)
104 PRK09496 trkA potassium transp 96.8 0.01 2.6E-07 38.2 8.3 65 5-70 2-71 (455)
105 COG1748 LYS9 Saccharopine dehy 96.8 0.011 2.9E-07 37.9 8.3 112 4-118 2-121 (389)
106 COG1052 LdhA Lactate dehydroge 96.8 0.0073 1.9E-07 39.2 7.3 60 3-70 146-206 (324)
107 TIGR01214 rmlD dTDP-4-dehydror 96.7 0.0031 7.8E-08 41.7 5.0 62 5-69 1-65 (317)
108 TIGR03466 HpnA hopanoid-associ 96.7 0.021 5.5E-07 36.0 9.0 65 5-69 2-69 (328)
109 PRK09496 trkA potassium transp 96.7 0.014 3.6E-07 37.2 8.1 32 234-267 355-386 (455)
110 PRK05808 3-hydroxybutyryl-CoA 96.6 0.0037 9.4E-08 41.2 4.5 39 1-39 1-39 (282)
111 pfam03133 TTL Tubulin-tyrosine 96.5 0.042 1.1E-06 34.0 9.8 144 124-271 53-261 (291)
112 PRK06035 3-hydroxyacyl-CoA deh 96.5 0.005 1.3E-07 40.2 4.7 38 1-38 1-38 (291)
113 COG4091 Predicted homoserine d 96.5 0.078 2E-06 32.2 10.7 170 5-184 19-222 (438)
114 COG1064 AdhP Zn-dependent alco 96.4 0.018 4.6E-07 36.5 7.4 66 3-70 167-235 (339)
115 PRK08293 3-hydroxybutyryl-CoA 96.4 0.0056 1.4E-07 39.9 4.6 39 1-39 1-39 (288)
116 PRK07660 consensus 96.4 0.0059 1.5E-07 39.8 4.6 39 1-39 1-39 (283)
117 KOG0023 consensus 96.4 0.0073 1.9E-07 39.1 5.1 67 2-68 181-250 (360)
118 PRK06932 glycerate dehydrogena 96.3 0.012 3E-07 37.7 6.0 58 28-85 3-65 (314)
119 PRK10669 putative cation:proto 96.3 0.016 4.1E-07 36.9 6.4 108 6-115 420-530 (558)
120 TIGR03201 dearomat_had 6-hydro 96.3 0.087 2.2E-06 31.9 10.2 29 5-33 169-197 (349)
121 COG1091 RfbD dTDP-4-dehydrorha 96.2 0.02 5E-07 36.2 6.6 51 6-70 3-56 (281)
122 PRK07236 hypothetical protein; 96.2 0.0094 2.4E-07 38.4 4.9 37 1-37 4-40 (386)
123 KOG0068 consensus 96.2 0.029 7.3E-07 35.2 7.2 81 3-90 146-233 (406)
124 PRK09987 dTDP-4-dehydrorhamnos 96.2 0.032 8.2E-07 34.8 7.4 55 5-69 2-59 (299)
125 PRK08655 prephenate dehydrogen 96.1 0.019 4.8E-07 36.4 6.2 62 5-70 2-64 (441)
126 PRK07530 3-hydroxybutyryl-CoA 96.1 0.01 2.6E-07 38.2 4.8 38 1-38 2-39 (292)
127 pfam03446 NAD_binding_2 NAD bi 96.1 0.012 3.2E-07 37.6 5.1 62 4-70 2-63 (163)
128 pfam00389 2-Hacid_dh D-isomer 96.1 0.019 4.9E-07 36.3 6.0 29 267-296 277-308 (313)
129 PRK07634 pyrroline-5-carboxyla 96.1 0.016 4.1E-07 36.8 5.6 27 1-27 2-28 (245)
130 PRK12367 short chain dehydroge 96.0 0.09 2.3E-06 31.8 9.2 71 2-72 16-90 (250)
131 PRK10537 voltage-gated potassi 96.0 0.043 1.1E-06 34.0 7.4 63 6-68 207-270 (356)
132 KOG1057 consensus 95.9 0.13 3.2E-06 30.8 9.6 180 91-278 120-335 (1018)
133 COG0673 MviM Predicted dehydro 95.9 0.1 2.6E-06 31.4 9.2 138 1-144 1-154 (342)
134 PRK11908 NAD-dependent epimera 95.8 0.12 3.1E-06 30.9 9.0 66 4-69 2-73 (347)
135 COG0287 TyrA Prephenate dehydr 95.7 0.05 1.3E-06 33.5 6.9 110 2-115 2-114 (279)
136 pfam01370 Epimerase NAD depend 95.7 0.11 2.8E-06 31.2 8.7 64 6-69 1-70 (235)
137 PRK00045 hemA glutamyl-tRNA re 95.6 0.033 8.5E-07 34.7 5.7 67 2-70 181-248 (429)
138 pfam11379 DUF3182 Protein of u 95.6 0.046 1.2E-06 33.8 6.4 94 106-201 104-204 (355)
139 PRK07531 bifunctional 3-hydrox 95.5 0.031 8E-07 34.9 5.2 35 4-38 3-37 (489)
140 PRK08220 2,3-dihydroxybenzoate 95.5 0.092 2.3E-06 31.8 7.5 62 2-63 7-69 (253)
141 PRK10675 UDP-galactose-4-epime 95.5 0.16 4E-06 30.2 8.7 65 5-69 2-78 (338)
142 PRK11579 putative oxidoreducta 95.4 0.093 2.4E-06 31.7 7.3 136 1-142 1-149 (346)
143 PRK13940 glutamyl-tRNA reducta 95.4 0.058 1.5E-06 33.1 6.2 69 2-70 180-248 (414)
144 PRK09117 consensus 95.4 0.026 6.6E-07 35.4 4.3 38 2-39 1-38 (282)
145 COG2910 Putative NADH-flavin r 95.3 0.092 2.4E-06 31.7 7.0 69 4-72 1-70 (211)
146 pfam01262 AlaDh_PNT_C Alanine 95.2 0.087 2.2E-06 31.9 6.7 67 4-70 21-90 (150)
147 PRK07066 3-hydroxybutyryl-CoA 95.2 0.037 9.4E-07 34.4 4.8 38 2-39 6-43 (321)
148 PRK08773 2-octaprenyl-3-methyl 95.2 0.056 1.4E-06 33.2 5.6 37 1-37 1-40 (392)
149 PRK05993 short chain dehydroge 95.2 0.11 2.9E-06 31.1 7.1 63 1-63 1-67 (277)
150 pfam01488 Shikimate_DH Shikima 95.2 0.036 9.2E-07 34.5 4.5 68 2-70 11-81 (134)
151 COG1087 GalE UDP-glucose 4-epi 95.1 0.23 5.9E-06 29.1 8.6 66 4-69 1-72 (329)
152 PRK06847 hypothetical protein; 95.1 0.052 1.3E-06 33.4 5.3 38 1-38 1-39 (375)
153 pfam02750 Synapsin_C Synapsin, 95.1 0.091 2.3E-06 31.8 6.5 140 112-265 29-175 (203)
154 PRK07679 pyrroline-5-carboxyla 95.1 0.062 1.6E-06 32.9 5.5 67 1-70 1-71 (279)
155 PRK09260 3-hydroxybutyryl-CoA 95.1 0.031 8E-07 34.9 4.0 35 4-38 3-37 (289)
156 PRK06179 short chain dehydroge 95.0 0.26 6.7E-06 28.7 8.6 64 1-64 1-66 (270)
157 pfam02737 3HCDH_N 3-hydroxyacy 95.0 0.036 9.2E-07 34.5 4.2 34 5-38 1-34 (180)
158 PRK07856 short chain dehydroge 95.0 0.18 4.5E-06 29.9 7.6 63 1-64 6-69 (254)
159 PRK06129 3-hydroxyacyl-CoA deh 94.9 0.043 1.1E-06 34.0 4.4 37 3-39 2-38 (308)
160 PRK07819 3-hydroxybutyryl-CoA 94.9 0.042 1.1E-06 34.0 4.3 36 3-38 2-37 (284)
161 pfam06973 DUF1297 Domain of un 94.9 0.073 1.9E-06 32.4 5.5 66 218-283 86-157 (188)
162 pfam04321 RmlD_sub_bind RmlD s 94.9 0.18 4.7E-06 29.7 7.5 51 6-69 1-54 (284)
163 PRK07577 short chain dehydroge 94.9 0.25 6.3E-06 28.9 8.2 60 1-63 1-61 (234)
164 PRK06123 short chain dehydroge 94.9 0.27 6.8E-06 28.6 8.4 35 1-35 1-36 (249)
165 PRK09739 hypothetical protein; 94.8 0.21 5.3E-06 29.4 7.7 73 1-73 1-88 (201)
166 PRK11064 wecC UDP-N-acetyl-D-m 94.8 0.056 1.4E-06 33.2 4.7 38 1-38 1-38 (415)
167 PRK07208 hypothetical protein; 94.8 0.073 1.9E-06 32.4 5.3 39 1-39 1-39 (474)
168 pfam01210 NAD_Gly3P_dh_N NAD-d 94.7 0.11 2.7E-06 31.4 6.0 34 4-37 1-34 (159)
169 PRK09754 phenylpropionate diox 94.7 0.081 2.1E-06 32.1 5.2 40 1-40 1-42 (400)
170 PRK07424 bifunctional sterol d 94.6 0.39 1E-05 27.5 8.8 71 2-72 179-255 (410)
171 PRK12409 D-amino acid dehydrog 94.6 0.078 2E-06 32.2 5.1 34 1-36 1-34 (410)
172 KOG3895 consensus 94.6 0.16 4.1E-06 30.1 6.7 165 86-265 185-364 (488)
173 PRK04965 nitric oxide reductas 94.6 0.084 2.1E-06 32.0 5.2 38 1-39 1-40 (378)
174 PRK08163 salicylate hydroxylas 94.6 0.085 2.2E-06 32.0 5.2 37 1-37 1-38 (396)
175 PRK08251 short chain dehydroge 94.5 0.24 6E-06 29.0 7.4 62 2-63 1-73 (248)
176 COG0451 WcaG Nucleoside-diphos 94.5 0.37 9.5E-06 27.6 8.4 66 5-70 2-70 (314)
177 PRK08268 3-hydroxybutyryl-CoA 94.5 0.075 1.9E-06 32.3 4.8 39 2-40 2-40 (503)
178 PRK00066 ldh L-lactate dehydro 94.5 0.11 2.8E-06 31.3 5.6 118 1-138 2-139 (315)
179 PRK13301 putative L-aspartate 94.5 0.43 1.1E-05 27.2 9.0 124 1-132 1-134 (267)
180 TIGR03385 CoA_CoA_reduc CoA-di 94.5 0.093 2.4E-06 31.7 5.2 29 5-33 139-167 (427)
181 PRK07024 short chain dehydroge 94.5 0.27 6.8E-06 28.6 7.5 62 1-63 1-69 (256)
182 PRK09754 phenylpropionate diox 94.4 0.096 2.4E-06 31.6 5.2 56 244-299 255-314 (400)
183 KOG1201 consensus 94.4 0.14 3.5E-06 30.6 6.0 63 2-64 37-107 (300)
184 pfam03807 F420_oxidored NADP o 94.4 0.062 1.6E-06 32.9 4.1 62 5-70 1-64 (93)
185 PRK06914 short chain dehydroge 94.4 0.39 1E-05 27.5 8.2 37 1-37 1-38 (280)
186 PRK12825 fabG 3-ketoacyl-(acyl 94.4 0.21 5.4E-06 29.3 6.8 36 1-36 5-41 (250)
187 pfam01408 GFO_IDH_MocA Oxidore 94.3 0.092 2.3E-06 31.7 4.9 64 5-70 2-68 (120)
188 PRK03806 murD UDP-N-acetylmura 94.3 0.15 3.8E-06 30.4 5.9 64 2-70 5-71 (438)
189 PRK12428 3-alpha-hydroxysteroi 94.2 0.48 1.2E-05 26.9 8.6 62 1-65 3-65 (261)
190 PRK06182 short chain dehydroge 94.2 0.24 6.1E-06 28.9 6.9 36 1-36 1-37 (273)
191 PRK11559 garR tartronate semia 94.2 0.086 2.2E-06 31.9 4.6 62 4-70 2-63 (295)
192 PRK13512 coenzyme A disulfide 94.2 0.11 2.8E-06 31.3 5.0 37 1-39 1-39 (438)
193 PRK08020 ubiF 2-octaprenyl-3-m 94.1 0.17 4.2E-06 30.0 5.8 39 1-39 1-41 (391)
194 PTZ00082 L-lactate dehydrogena 94.1 0.12 3E-06 31.1 5.1 66 1-70 5-81 (322)
195 PRK08177 short chain dehydroge 94.1 0.29 7.5E-06 28.3 7.1 62 3-64 1-66 (225)
196 PRK08642 fabG 3-ketoacyl-(acyl 94.1 0.22 5.6E-06 29.2 6.4 36 1-36 4-40 (254)
197 PRK09880 L-idonate 5-dehydroge 94.1 0.35 8.8E-06 27.9 7.4 15 282-296 294-308 (343)
198 PRK08263 short chain dehydroge 94.1 0.39 1E-05 27.5 7.7 37 1-37 1-38 (275)
199 PRK07890 short chain dehydroge 94.0 0.43 1.1E-05 27.2 7.9 37 1-37 3-40 (258)
200 TIGR03589 PseB UDP-N-acetylglu 94.0 0.53 1.4E-05 26.6 8.7 69 1-69 2-79 (324)
201 PRK08774 consensus 94.0 0.12 3.1E-06 31.0 5.0 37 1-37 1-38 (402)
202 PRK03369 murD UDP-N-acetylmura 94.0 0.23 5.8E-06 29.1 6.4 35 4-38 13-47 (487)
203 PRK07417 arogenate dehydrogena 94.0 0.14 3.7E-06 30.4 5.4 65 4-72 2-66 (280)
204 PRK06834 hypothetical protein; 94.0 0.12 3.1E-06 30.9 5.0 37 1-37 1-37 (488)
205 PRK06483 short chain dehydroge 93.9 0.37 9.5E-06 27.7 7.4 63 1-64 1-67 (236)
206 PRK07677 short chain dehydroge 93.9 0.19 4.8E-06 29.7 5.8 37 1-37 1-38 (254)
207 PRK05786 fabG 3-ketoacyl-(acyl 93.9 0.29 7.3E-06 28.4 6.8 63 1-63 3-73 (238)
208 PRK06124 gluconate 5-dehydroge 93.9 0.24 6.2E-06 28.9 6.4 37 1-37 12-49 (259)
209 PRK06617 2-octaprenyl-6-methox 93.9 0.2 5.1E-06 29.5 5.9 34 1-36 1-34 (374)
210 KOG2614 consensus 93.9 0.21 5.5E-06 29.3 6.0 115 3-121 2-122 (420)
211 PRK07494 2-octaprenyl-6-methox 93.8 0.15 3.8E-06 30.4 5.1 37 1-37 1-39 (386)
212 TIGR02053 MerA mercuric reduct 93.8 0.052 1.3E-06 33.4 2.7 32 5-36 2-36 (494)
213 PRK08849 2-octaprenyl-3-methyl 93.7 0.25 6.3E-06 28.8 6.2 35 1-35 1-35 (384)
214 TIGR03366 HpnZ_proposed putati 93.7 0.53 1.4E-05 26.6 7.8 11 282-292 249-259 (280)
215 PRK08217 fabG 3-ketoacyl-(acyl 93.6 0.29 7.4E-06 28.4 6.4 63 1-63 3-74 (253)
216 PRK01747 mnmC 5-methylaminomet 93.6 0.17 4.3E-06 30.0 5.2 34 3-36 256-289 (660)
217 TIGR01983 UbiG ubiquinone bios 93.6 0.089 2.3E-06 31.8 3.7 102 3-110 85-206 (275)
218 PRK06077 fabG 3-ketoacyl-(acyl 93.6 0.58 1.5E-05 26.4 7.8 34 1-34 1-35 (249)
219 PRK09072 short chain dehydroge 93.6 0.24 6.1E-06 29.0 5.8 62 1-62 3-71 (262)
220 PRK12810 gltD glutamate syntha 93.6 0.21 5.4E-06 29.3 5.6 39 2-40 142-180 (472)
221 PRK11749 putative oxidoreducta 93.6 0.21 5.4E-06 29.3 5.6 39 2-40 139-177 (460)
222 PRK12745 3-ketoacyl-(acyl-carr 93.5 0.3 7.6E-06 28.3 6.3 36 2-37 4-40 (259)
223 PRK06180 short chain dehydroge 93.5 0.51 1.3E-05 26.7 7.5 37 1-37 1-39 (277)
224 PRK12938 acetyacetyl-CoA reduc 93.5 0.4 1E-05 27.4 6.9 33 1-33 1-34 (246)
225 pfam00070 Pyr_redox Pyridine n 93.5 0.14 3.5E-06 30.6 4.5 33 5-37 1-33 (82)
226 PRK07041 short chain dehydroge 93.5 0.57 1.5E-05 26.4 7.7 37 1-37 5-42 (240)
227 KOG2380 consensus 93.5 0.15 3.9E-06 30.2 4.8 128 4-148 53-193 (480)
228 TIGR02152 D_ribokin_bact ribok 93.5 0.64 1.6E-05 26.1 7.9 144 6-159 58-235 (303)
229 PRK09424 pntA NAD(P) transhydr 93.5 0.42 1.1E-05 27.3 7.0 84 175-261 267-368 (510)
230 PRK06185 hypothetical protein; 93.4 0.16 4E-06 30.2 4.7 37 1-37 3-40 (409)
231 PRK07502 cyclohexadienyl dehyd 93.4 0.36 9.1E-06 27.8 6.6 66 4-72 7-74 (307)
232 TIGR03278 methan_mark_10 putat 93.4 0.63 1.6E-05 26.1 7.8 193 86-307 50-263 (404)
233 PRK09564 coenzyme A disulfide 93.4 0.19 4.8E-06 29.6 5.1 35 5-39 2-38 (443)
234 pfam00743 FMO-like Flavin-bind 93.4 0.18 4.5E-06 29.8 4.9 36 3-38 1-36 (532)
235 COG0373 HemA Glutamyl-tRNA red 93.4 0.25 6.3E-06 28.9 5.7 68 2-70 177-244 (414)
236 COG2072 TrkA Predicted flavopr 93.4 0.17 4.4E-06 29.9 4.9 37 1-37 6-43 (443)
237 PRK06953 short chain dehydroge 93.4 0.42 1.1E-05 27.3 6.9 62 4-65 2-66 (222)
238 PRK08850 2-octaprenyl-6-methox 93.4 0.19 4.9E-06 29.6 5.1 36 1-36 1-37 (405)
239 PRK05557 fabG 3-ketoacyl-(acyl 93.3 0.51 1.3E-05 26.8 7.2 38 1-38 3-41 (248)
240 PRK08277 D-mannonate oxidoredu 93.3 0.57 1.5E-05 26.4 7.4 61 1-62 8-78 (278)
241 PRK06928 pyrroline-5-carboxyla 93.3 0.22 5.7E-06 29.1 5.3 65 1-70 1-69 (275)
242 KOG0069 consensus 93.3 0.23 5.9E-06 29.1 5.4 31 271-301 305-335 (336)
243 TIGR03649 ergot_EASG ergot alk 93.2 0.22 5.5E-06 29.2 5.2 61 5-66 1-62 (285)
244 PRK06545 prephenate dehydrogen 93.2 0.19 4.8E-06 29.6 4.9 161 4-175 1-169 (357)
245 PRK08226 short chain dehydroge 93.2 0.54 1.4E-05 26.5 7.2 61 1-63 4-74 (263)
246 pfam01073 3Beta_HSD 3-beta hyd 93.2 0.71 1.8E-05 25.8 7.8 62 8-69 2-71 (280)
247 PRK06125 short chain dehydroge 93.2 0.65 1.7E-05 26.0 7.6 37 1-37 5-42 (259)
248 PRK12742 oxidoreductase; Provi 93.2 0.65 1.6E-05 26.0 7.5 32 2-33 5-37 (237)
249 PRK08306 dipicolinate synthase 93.2 0.15 3.8E-06 30.3 4.3 105 2-121 1-122 (296)
250 KOG0409 consensus 93.1 0.12 3E-06 31.1 3.7 64 2-70 34-97 (327)
251 PRK02006 murD UDP-N-acetylmura 93.1 0.28 7E-06 28.5 5.6 38 2-39 6-43 (501)
252 PRK09134 short chain dehydroge 93.1 0.32 8.1E-06 28.1 5.9 31 2-32 8-39 (256)
253 PRK05335 tRNA (uracil-5-)-meth 93.1 0.36 9.1E-06 27.8 6.1 42 1-42 1-44 (434)
254 PRK07814 short chain dehydroge 93.1 0.35 8.9E-06 27.9 6.0 62 1-63 8-79 (263)
255 PRK07045 putative monooxygenas 93.1 0.22 5.6E-06 29.2 5.0 41 1-41 1-43 (388)
256 PTZ00117 malate dehydrogenase; 93.0 0.48 1.2E-05 26.9 6.7 110 4-130 2-125 (313)
257 PRK01390 murD UDP-N-acetylmura 93.0 0.39 9.9E-06 27.5 6.2 37 2-38 8-44 (457)
258 PRK12491 pyrroline-5-carboxyla 93.0 0.25 6.4E-06 28.8 5.2 65 1-70 1-69 (272)
259 PRK05134 3-demethylubiquinone- 93.0 0.51 1.3E-05 26.7 6.8 74 2-77 48-129 (233)
260 PRK06126 hypothetical protein; 93.0 0.18 4.7E-06 29.7 4.5 38 1-38 2-42 (545)
261 PRK08219 short chain dehydroge 93.0 0.79 2E-05 25.5 8.2 63 1-64 1-67 (226)
262 pfam03435 Saccharop_dh Sacchar 92.9 0.56 1.4E-05 26.5 6.9 82 6-88 1-93 (384)
263 PRK07231 fabG 3-ketoacyl-(acyl 92.9 0.45 1.2E-05 27.1 6.5 37 1-37 4-41 (250)
264 COG1250 FadB 3-hydroxyacyl-CoA 92.9 0.15 3.9E-06 30.3 4.0 75 218-301 154-231 (307)
265 PRK13302 putative L-aspartate 92.9 0.35 8.8E-06 27.9 5.9 120 3-131 6-135 (271)
266 PRK06057 short chain dehydroge 92.9 0.51 1.3E-05 26.8 6.7 36 2-37 6-42 (255)
267 PRK10217 dTDP-glucose 4,6-dehy 92.9 0.81 2.1E-05 25.4 8.4 66 4-69 2-79 (355)
268 PRK08063 enoyl-(acyl carrier p 92.9 0.43 1.1E-05 27.2 6.3 35 1-35 2-37 (250)
269 PRK08010 pyridine nucleotide-d 92.9 0.26 6.7E-06 28.7 5.2 36 1-36 1-36 (441)
270 PRK06500 short chain dehydroge 92.8 0.46 1.2E-05 27.0 6.4 37 1-37 4-41 (249)
271 PRK10309 galactitol-1-phosphat 92.8 0.83 2.1E-05 25.3 8.1 11 283-293 298-308 (347)
272 PRK08017 short chain dehydroge 92.8 0.66 1.7E-05 26.0 7.2 35 3-37 2-37 (256)
273 PRK06113 7-alpha-hydroxysteroi 92.8 0.77 2E-05 25.5 7.5 36 2-37 10-46 (255)
274 PRK07067 sorbitol dehydrogenas 92.8 0.69 1.8E-05 25.8 7.2 37 1-37 3-40 (256)
275 PRK07576 short chain dehydroge 92.8 0.42 1.1E-05 27.3 6.1 62 2-63 7-77 (260)
276 PRK07831 short chain dehydroge 92.8 0.49 1.2E-05 26.9 6.5 64 1-64 14-89 (261)
277 PRK06947 glucose-1-dehydrogena 92.8 0.58 1.5E-05 26.3 6.8 34 2-35 5-39 (252)
278 PRK05875 short chain dehydroge 92.7 0.45 1.1E-05 27.1 6.2 37 1-37 5-42 (277)
279 cd01171 YXKO-related B.subtili 92.7 0.84 2.2E-05 25.3 8.5 98 5-102 10-120 (254)
280 PRK06701 short chain dehydroge 92.7 0.55 1.4E-05 26.5 6.6 37 1-37 43-80 (289)
281 PRK07889 enoyl-(acyl carrier p 92.7 0.55 1.4E-05 26.5 6.6 63 1-63 5-76 (256)
282 PRK05868 hypothetical protein; 92.7 0.27 7E-06 28.5 5.1 35 4-38 2-36 (372)
283 PRK06138 short chain dehydroge 92.6 0.81 2.1E-05 25.4 7.4 37 1-37 3-40 (252)
284 PRK12831 putative oxidoreducta 92.6 0.32 8.1E-06 28.1 5.3 39 2-40 139-177 (464)
285 cd01065 NAD_bind_Shikimate_DH 92.6 0.21 5.3E-06 29.4 4.3 36 2-37 18-54 (155)
286 COG0702 Predicted nucleoside-d 92.6 0.81 2.1E-05 25.4 7.4 112 4-115 1-135 (275)
287 PRK12935 acetoacetyl-CoA reduc 92.6 0.74 1.9E-05 25.6 7.2 33 1-33 4-37 (247)
288 PRK12771 putative glutamate sy 92.6 0.32 8E-06 28.1 5.3 40 2-41 136-175 (560)
289 PRK00683 murD UDP-N-acetylmura 92.5 0.26 6.7E-06 28.7 4.8 85 1-91 1-88 (418)
290 pfam10727 Rossmann-like Rossma 92.5 0.31 8E-06 28.2 5.2 70 7-83 1-70 (111)
291 PRK08936 glucose-1-dehydrogena 92.5 0.56 1.4E-05 26.5 6.5 35 1-35 5-40 (261)
292 cd05291 HicDH_like L-2-hydroxy 92.5 0.25 6.4E-06 28.8 4.7 110 4-130 1-124 (306)
293 PRK05653 fabG 3-ketoacyl-(acyl 92.5 0.54 1.4E-05 26.6 6.4 37 1-37 3-40 (246)
294 PRK00711 D-amino acid dehydrog 92.5 0.29 7.4E-06 28.4 5.0 32 5-36 2-33 (416)
295 PRK07832 short chain dehydroge 92.4 0.45 1.1E-05 27.1 5.9 61 4-64 1-71 (272)
296 pfam03721 UDPG_MGDP_dh_N UDP-g 92.4 0.63 1.6E-05 26.1 6.6 33 5-37 2-34 (185)
297 PRK13984 putative oxidoreducta 92.4 0.37 9.4E-06 27.7 5.4 38 2-39 282-319 (604)
298 PRK07776 consensus 92.3 0.56 1.4E-05 26.5 6.3 37 1-37 6-43 (252)
299 PRK12770 putative glutamate sy 92.3 0.28 7.3E-06 28.4 4.7 36 3-38 17-52 (350)
300 PRK05872 short chain dehydroge 92.3 0.91 2.3E-05 25.0 7.3 64 1-64 7-76 (296)
301 PRK06753 hypothetical protein; 92.3 0.27 7E-06 28.6 4.6 34 5-38 2-35 (373)
302 TIGR03023 WcaJ_sugtrans Undeca 92.2 0.77 2E-05 25.5 6.9 66 2-70 127-197 (451)
303 COG2084 MmsB 3-hydroxyisobutyr 92.1 0.41 1.1E-05 27.4 5.4 62 4-70 1-63 (286)
304 PRK12809 putative oxidoreducta 92.1 0.4 1E-05 27.5 5.3 38 2-39 309-346 (639)
305 PRK12769 putative oxidoreducta 92.1 0.4 1E-05 27.4 5.3 37 2-38 326-362 (654)
306 PRK12748 3-ketoacyl-(acyl-carr 92.1 1 2.6E-05 24.7 8.4 38 1-38 3-43 (257)
307 PTZ00142 6-phosphogluconate de 92.1 0.52 1.3E-05 26.7 5.9 70 1-70 1-76 (474)
308 PRK12744 short chain dehydroge 92.1 1 2.6E-05 24.7 7.6 37 1-37 6-43 (257)
309 PRK12814 putative NADPH-depend 92.1 0.41 1.1E-05 27.3 5.4 40 2-41 192-231 (652)
310 PRK08862 short chain dehydroge 92.1 0.85 2.2E-05 25.2 7.0 62 1-62 3-73 (227)
311 PRK06475 salicylate hydroxylas 92.1 0.32 8.1E-06 28.1 4.8 37 2-38 1-37 (400)
312 PRK08628 short chain dehydroge 92.0 1 2.6E-05 24.7 7.5 36 1-36 5-41 (258)
313 PRK06184 hypothetical protein; 92.0 0.35 9E-06 27.8 5.0 38 1-38 1-41 (503)
314 PRK08013 hypothetical protein; 92.0 0.69 1.7E-05 25.9 6.5 36 1-36 1-36 (400)
315 COG0345 ProC Pyrroline-5-carbo 92.0 0.53 1.4E-05 26.6 5.9 63 4-70 2-68 (266)
316 pfam01256 Carb_kinase Carbohyd 92.0 0.99 2.5E-05 24.8 7.3 93 6-99 1-104 (241)
317 PRK08265 short chain dehydroge 92.0 0.83 2.1E-05 25.3 6.9 37 1-37 4-41 (261)
318 TIGR02352 thiamin_ThiO glycine 92.0 0.2 5.2E-06 29.4 3.7 58 6-63 1-63 (357)
319 PRK08401 L-aspartate oxidase; 92.0 0.36 9.1E-06 27.8 5.0 35 1-37 1-35 (464)
320 PRK08125 bifunctional UDP-gluc 92.0 1 2.7E-05 24.6 8.0 65 5-69 317-387 (660)
321 PRK06523 short chain dehydroge 91.9 1.1 2.7E-05 24.6 7.7 62 2-64 8-70 (260)
322 COG2081 Predicted flavoprotein 91.9 0.42 1.1E-05 27.3 5.3 37 1-37 1-37 (408)
323 cd05293 LDH_1 A subgroup of L- 91.9 0.45 1.1E-05 27.1 5.4 111 3-130 3-127 (312)
324 PRK06346 consensus 91.8 0.89 2.3E-05 25.1 6.9 63 1-63 3-74 (251)
325 PRK06200 2,3-dihydroxy-2,3-dih 91.8 0.71 1.8E-05 25.7 6.4 37 1-37 4-41 (263)
326 PRK01438 murD UDP-N-acetylmura 91.8 0.43 1.1E-05 27.2 5.2 37 2-38 13-49 (481)
327 PRK07825 short chain dehydroge 91.8 1.1 2.8E-05 24.5 7.9 63 1-63 3-70 (273)
328 PRK00141 murD UDP-N-acetylmura 91.8 0.4 1E-05 27.4 5.0 37 3-39 17-53 (476)
329 PRK08641 sdhA succinate dehydr 91.8 0.39 1E-05 27.5 5.0 34 1-34 1-34 (589)
330 pfam00670 AdoHcyase_NAD S-aden 91.7 0.53 1.4E-05 26.6 5.6 67 2-74 22-88 (162)
331 PRK06949 short chain dehydroge 91.7 0.8 2E-05 25.4 6.5 35 2-36 8-43 (258)
332 PRK07109 short chain dehydroge 91.7 0.69 1.8E-05 25.9 6.2 64 1-64 6-78 (338)
333 PRK05976 dihydrolipoamide dehy 91.7 0.42 1.1E-05 27.3 5.1 35 1-35 1-36 (464)
334 PRK06398 aldose dehydrogenase; 91.7 1.1 2.8E-05 24.5 7.8 61 1-63 4-65 (256)
335 PRK07588 hypothetical protein; 91.7 0.36 9.1E-06 27.8 4.7 33 5-37 2-34 (391)
336 TIGR03206 benzo_BadH 2-hydroxy 91.7 0.75 1.9E-05 25.6 6.3 37 1-37 1-38 (250)
337 PRK06116 glutathione reductase 91.7 0.42 1.1E-05 27.3 5.0 36 1-36 1-37 (450)
338 PRK06198 short chain dehydroge 91.7 0.61 1.6E-05 26.2 5.8 36 1-36 4-41 (268)
339 PRK07102 short chain dehydroge 91.6 0.66 1.7E-05 26.0 6.0 34 4-37 2-36 (243)
340 PRK08264 short chain dehydroge 91.6 1.1 2.9E-05 24.4 8.7 63 1-64 3-67 (235)
341 PRK12824 acetoacetyl-CoA reduc 91.6 0.93 2.4E-05 25.0 6.8 37 3-39 2-39 (245)
342 PRK07035 short chain dehydroge 91.6 0.59 1.5E-05 26.3 5.8 36 1-36 6-42 (252)
343 cd05292 LDH_2 A subgroup of L- 91.6 0.35 9E-06 27.8 4.6 109 5-130 2-123 (308)
344 PRK06171 sorbitol-6-phosphate 91.6 1.1 2.9E-05 24.4 7.8 62 1-63 7-69 (266)
345 PRK07806 short chain dehydroge 91.6 1.1 2.9E-05 24.4 8.1 63 2-64 5-77 (248)
346 PRK05866 short chain dehydroge 91.6 1 2.7E-05 24.6 7.0 63 2-64 39-110 (290)
347 COG0300 DltE Short-chain dehyd 91.6 1.1 2.9E-05 24.4 7.5 62 1-62 4-75 (265)
348 KOG1430 consensus 91.6 1.1 2.9E-05 24.4 7.7 65 1-65 2-77 (361)
349 PRK07846 mycothione/glutathion 91.6 0.41 1E-05 27.4 4.9 28 6-35 4-31 (453)
350 TIGR03025 EPS_sugtrans exopoly 91.5 1.2 2.9E-05 24.3 7.3 65 2-69 124-193 (445)
351 PRK08993 2-deoxy-D-gluconate 3 91.5 0.97 2.5E-05 24.8 6.7 36 1-36 8-44 (253)
352 PRK09242 tropinone reductase; 91.5 0.68 1.7E-05 25.9 5.9 37 1-37 8-45 (258)
353 COG2099 CobK Precorrin-6x redu 91.5 0.74 1.9E-05 25.7 6.1 126 3-141 2-133 (257)
354 PRK08416 7-alpha-hydroxysteroi 91.4 0.98 2.5E-05 24.8 6.7 35 1-35 6-41 (260)
355 TIGR03452 mycothione_red mycot 91.4 0.47 1.2E-05 26.9 5.1 29 6-36 5-33 (452)
356 PRK05867 short chain dehydroge 91.4 0.94 2.4E-05 24.9 6.6 37 1-37 7-44 (253)
357 PRK08085 gluconate 5-dehydroge 91.4 1.2 3.1E-05 24.2 7.8 36 2-37 8-44 (254)
358 PRK12826 3-ketoacyl-(acyl-carr 91.3 0.86 2.2E-05 25.2 6.3 37 1-37 4-41 (253)
359 PRK04308 murD UDP-N-acetylmura 91.3 0.63 1.6E-05 26.1 5.6 89 2-96 4-101 (445)
360 cd01483 E1_enzyme_family Super 91.3 1.2 3.1E-05 24.2 7.1 35 5-39 1-36 (143)
361 PRK07074 short chain dehydroge 91.3 0.82 2.1E-05 25.3 6.2 35 2-36 1-36 (256)
362 PRK07774 short chain dehydroge 91.2 0.81 2.1E-05 25.4 6.1 37 1-37 4-41 (250)
363 PRK08339 short chain dehydroge 91.2 1.2 3.2E-05 24.1 7.3 37 1-37 6-43 (263)
364 PRK09186 flagellin modificatio 91.2 0.97 2.5E-05 24.8 6.5 37 1-37 2-39 (255)
365 PRK08057 cobalt-precorrin-6x r 91.2 1.2 3.2E-05 24.1 7.3 63 4-68 2-66 (241)
366 PRK12490 6-phosphogluconate de 91.2 0.78 2E-05 25.5 6.0 34 5-38 2-35 (298)
367 PRK07326 short chain dehydroge 91.2 0.81 2.1E-05 25.4 6.0 63 2-64 4-73 (235)
368 PRK07454 short chain dehydroge 91.2 1.3 3.2E-05 24.1 7.3 62 1-63 3-75 (241)
369 KOG1198 consensus 91.1 1.3 3.2E-05 24.1 7.5 66 3-68 158-229 (347)
370 PRK05565 fabG 3-ketoacyl-(acyl 91.1 0.91 2.3E-05 25.1 6.3 32 2-33 4-36 (247)
371 PRK13304 L-aspartate dehydroge 91.1 0.64 1.6E-05 26.1 5.5 120 4-131 2-132 (265)
372 PRK09135 pteridine reductase; 91.1 1.2 3.1E-05 24.2 6.9 62 2-63 5-77 (249)
373 PRK06940 short chain dehydroge 91.1 1.3 3.2E-05 24.1 7.2 62 1-63 3-72 (277)
374 PRK12481 2-deoxy-D-gluconate 3 91.1 1.1 2.8E-05 24.5 6.7 34 2-35 7-41 (251)
375 PRK07478 short chain dehydroge 91.1 0.88 2.2E-05 25.1 6.2 37 1-37 4-41 (254)
376 PRK05650 short chain dehydroge 91.1 1.3 3.3E-05 24.1 7.0 60 5-64 2-70 (270)
377 PRK08243 4-hydroxybenzoate 3-m 91.1 0.6 1.5E-05 26.3 5.3 32 5-36 4-35 (392)
378 PRK06327 dihydrolipoamide dehy 91.1 0.52 1.3E-05 26.7 5.0 36 1-36 1-37 (475)
379 PRK13303 L-aspartate dehydroge 91.1 0.56 1.4E-05 26.5 5.1 121 4-130 2-131 (265)
380 PRK11880 pyrroline-5-carboxyla 91.1 0.51 1.3E-05 26.8 4.9 62 4-70 3-68 (267)
381 PRK06227 consensus 91.0 0.87 2.2E-05 25.2 6.1 37 1-37 3-40 (256)
382 PRK12429 3-hydroxybutyrate deh 91.0 1.1 2.7E-05 24.6 6.5 37 1-37 2-39 (258)
383 PRK05579 bifunctional phosphop 91.0 1.3 3.4E-05 24.0 8.2 32 2-33 3-38 (392)
384 PRK07479 consensus 90.9 0.86 2.2E-05 25.2 6.0 37 1-37 3-40 (252)
385 cd01485 E1-1_like Ubiquitin ac 90.9 1 2.7E-05 24.6 6.5 36 2-37 18-54 (198)
386 PTZ00318 NADH dehydrogenase; P 90.9 0.41 1E-05 27.4 4.4 37 1-37 8-44 (514)
387 PRK06416 dihydrolipoamide dehy 90.9 0.54 1.4E-05 26.5 5.0 31 6-36 7-37 (462)
388 PRK07845 flavoprotein disulfid 90.9 0.6 1.5E-05 26.2 5.2 33 1-35 1-33 (467)
389 TIGR03325 BphB_TodD cis-2,3-di 90.9 1.2 3.2E-05 24.1 6.8 62 2-63 4-71 (262)
390 PRK07775 short chain dehydroge 90.9 0.6 1.5E-05 26.2 5.2 62 2-64 9-80 (275)
391 PRK00258 aroE shikimate 5-dehy 90.9 0.44 1.1E-05 27.2 4.5 28 2-29 4-35 (275)
392 PRK06912 acoL dihydrolipoamide 90.9 0.59 1.5E-05 26.3 5.1 32 5-36 2-33 (458)
393 PRK06467 dihydrolipoamide dehy 90.8 0.55 1.4E-05 26.5 4.9 35 1-35 1-36 (472)
394 PRK06115 dihydrolipoamide dehy 90.8 0.57 1.5E-05 26.4 5.0 34 1-34 1-34 (466)
395 PRK07538 hypothetical protein; 90.7 0.5 1.3E-05 26.8 4.6 33 5-37 2-34 (413)
396 PRK07666 fabG 3-ketoacyl-(acyl 90.7 1 2.6E-05 24.7 6.2 64 1-64 4-76 (238)
397 PRK06292 dihydrolipoamide dehy 90.7 0.61 1.6E-05 26.2 5.1 36 1-36 1-36 (460)
398 PRK05693 short chain dehydroge 90.7 1.4 3.6E-05 23.8 7.7 59 4-62 2-63 (274)
399 COG1249 Lpd Pyruvate/2-oxoglut 90.7 0.59 1.5E-05 26.3 5.0 33 4-36 5-37 (454)
400 PRK07097 gluconate 5-dehydroge 90.6 1.1 2.8E-05 24.4 6.4 36 2-37 9-45 (265)
401 PRK02472 murD UDP-N-acetylmura 90.6 0.72 1.8E-05 25.7 5.4 35 2-36 8-42 (450)
402 PRK07057 sdhA succinate dehydr 90.6 0.64 1.6E-05 26.1 5.1 35 1-35 8-44 (591)
403 pfam01494 FAD_binding_3 FAD bi 90.6 0.49 1.3E-05 26.8 4.5 33 6-38 4-36 (349)
404 TIGR03315 Se_ygfK putative sel 90.6 0.69 1.8E-05 25.8 5.3 39 2-40 536-574 (1012)
405 cd05211 NAD_bind_Glu_Leu_Phe_V 90.6 1.4 3.6E-05 23.7 9.1 54 1-62 21-74 (217)
406 TIGR03570 NeuD_NnaD sugar O-ac 90.6 0.72 1.8E-05 25.7 5.4 47 5-51 1-48 (201)
407 PRK06720 hypothetical protein; 90.6 1.4 3.6E-05 23.7 6.9 62 2-63 15-85 (169)
408 PRK09599 6-phosphogluconate de 90.5 0.52 1.3E-05 26.7 4.6 60 5-69 2-64 (301)
409 PRK07523 gluconate 5-dehydroge 90.5 1.1 2.8E-05 24.5 6.2 36 1-36 7-43 (251)
410 PRK06114 short chain dehydroge 90.5 1.4 3.7E-05 23.7 7.2 62 2-63 15-86 (262)
411 PRK06183 mhpA 3-(3-hydroxyphen 90.4 0.56 1.4E-05 26.5 4.7 34 5-38 14-47 (554)
412 PRK12828 short chain dehydroge 90.4 1.2 3.2E-05 24.1 6.5 36 2-37 6-42 (239)
413 PRK12937 short chain dehydroge 90.4 0.93 2.4E-05 25.0 5.8 35 2-36 4-39 (245)
414 PRK06101 short chain dehydroge 90.4 1.3 3.4E-05 24.0 6.5 60 4-64 2-67 (241)
415 PRK07062 short chain dehydroge 90.3 1.4 3.5E-05 23.9 6.6 63 1-63 6-79 (265)
416 pfam07992 Pyr_redox_2 Pyridine 90.3 0.75 1.9E-05 25.6 5.3 33 6-38 2-34 (277)
417 PRK06841 short chain dehydroge 90.3 1.5 3.8E-05 23.6 6.8 37 1-37 13-50 (255)
418 PRK07190 hypothetical protein; 90.2 0.76 1.9E-05 25.6 5.2 38 1-38 1-40 (480)
419 PRK09853 putative selenate red 90.2 0.82 2.1E-05 25.4 5.3 38 2-39 549-586 (1032)
420 PRK09126 hypothetical protein; 90.1 0.67 1.7E-05 25.9 4.9 37 1-37 1-37 (392)
421 PRK08507 prephenate dehydrogen 90.1 0.82 2.1E-05 25.3 5.3 80 5-92 2-84 (275)
422 PRK07533 enoyl-(acyl carrier p 90.1 1.6 4E-05 23.5 7.4 62 2-63 5-76 (254)
423 COG2085 Predicted dinucleotide 90.0 0.88 2.2E-05 25.1 5.4 33 4-36 2-34 (211)
424 pfam01134 GIDA Glucose inhibit 90.0 0.68 1.7E-05 25.9 4.8 95 6-112 2-104 (391)
425 COG0654 UbiH 2-polyprenyl-6-me 89.9 1 2.6E-05 24.7 5.7 33 3-35 2-34 (387)
426 PRK07680 late competence prote 89.9 0.84 2.1E-05 25.3 5.2 62 5-70 2-68 (273)
427 PRK06463 fabG 3-ketoacyl-(acyl 89.9 1.6 4.1E-05 23.4 8.0 61 2-62 6-70 (254)
428 TIGR02279 PaaC-3OHAcCoADH 3-hy 89.9 0.72 1.8E-05 25.7 4.9 110 3-128 5-123 (508)
429 pfam01266 DAO FAD dependent ox 89.9 1.6 4.1E-05 23.4 6.6 31 6-36 2-32 (309)
430 PRK07251 pyridine nucleotide-d 89.8 0.72 1.8E-05 25.7 4.8 36 1-36 1-36 (438)
431 PRK07608 hypothetical protein; 89.8 0.68 1.7E-05 25.9 4.7 35 5-39 7-41 (389)
432 PRK01710 murD UDP-N-acetylmura 89.8 0.81 2.1E-05 25.4 5.1 36 2-37 13-48 (458)
433 PRK13748 putative mercuric red 89.8 0.9 2.3E-05 25.1 5.3 30 6-35 101-130 (561)
434 PRK08278 short chain dehydroge 89.7 1.3 3.4E-05 23.9 6.1 37 1-37 4-41 (273)
435 PRK08643 acetoin reductase; Va 89.7 1.4 3.5E-05 23.8 6.2 61 1-63 1-71 (256)
436 PRK06482 short chain dehydroge 89.7 1.7 4.3E-05 23.3 7.6 62 1-63 1-68 (276)
437 PRK06719 precorrin-2 dehydroge 89.7 1.7 4.3E-05 23.3 7.0 37 1-37 11-47 (157)
438 PRK12823 benD 1,6-dihydroxycyc 89.7 1.7 4.3E-05 23.2 8.0 34 3-36 8-42 (260)
439 PRK13394 3-hydroxybutyrate deh 89.7 1.3 3.3E-05 24.0 6.1 36 2-37 6-42 (262)
440 PRK12778 putative bifunctional 89.6 1.1 2.7E-05 24.6 5.6 46 4-49 99-154 (760)
441 PRK12859 3-ketoacyl-(acyl-carr 89.6 1.7 4.3E-05 23.2 7.7 35 1-35 4-41 (257)
442 pfam03486 HI0933_like HI0933-l 89.6 0.89 2.3E-05 25.1 5.2 32 6-37 3-34 (405)
443 PRK07364 2-octaprenyl-6-methox 89.6 0.72 1.8E-05 25.7 4.7 32 6-37 20-51 (413)
444 PRK06370 mercuric reductase; V 89.6 0.79 2E-05 25.5 4.9 32 5-36 6-37 (459)
445 PRK08213 gluconate 5-dehydroge 89.6 1.7 4.4E-05 23.2 8.4 37 1-37 10-47 (259)
446 cd01075 NAD_bind_Leu_Phe_Val_D 89.5 0.63 1.6E-05 26.1 4.4 65 2-70 27-91 (200)
447 PRK05732 2-octaprenyl-6-methox 89.5 0.85 2.2E-05 25.3 5.0 36 1-36 1-39 (395)
448 COG0771 MurD UDP-N-acetylmuram 89.5 1.6 4.2E-05 23.3 6.5 63 3-70 7-75 (448)
449 PRK06139 short chain dehydroge 89.4 1.3 3.4E-05 23.9 6.0 64 1-64 4-76 (324)
450 KOG2799 consensus 89.4 0.77 2E-05 25.5 4.7 101 101-202 26-155 (434)
451 PRK12936 3-ketoacyl-(acyl-carr 89.4 1.4 3.5E-05 23.8 6.0 35 1-35 4-39 (245)
452 KOG1447 consensus 89.3 1.2 3E-05 24.3 5.6 102 103-204 25-154 (412)
453 pfam02571 CbiJ Precorrin-6x re 89.3 1.8 4.5E-05 23.1 12.2 64 4-68 1-68 (246)
454 PRK06181 short chain dehydroge 89.3 1.6 4.2E-05 23.3 6.3 61 4-64 2-71 (263)
455 pfam00208 ELFV_dehydrog Glutam 89.3 1.8 4.6E-05 23.1 8.8 55 2-64 31-85 (237)
456 PRK12827 short chain dehydroge 89.3 1.8 4.6E-05 23.1 7.6 36 1-36 4-40 (251)
457 PRK12939 short chain dehydroge 89.3 1.4 3.6E-05 23.8 6.0 35 2-36 6-41 (250)
458 PRK05714 2-octaprenyl-3-methyl 89.2 0.76 1.9E-05 25.6 4.6 32 6-37 5-36 (405)
459 COG0063 Predicted sugar kinase 89.2 1.8 4.6E-05 23.0 8.5 136 4-143 33-197 (284)
460 PRK06172 short chain dehydroge 89.2 1.5 3.8E-05 23.6 6.1 36 2-37 6-42 (253)
461 PRK12749 quinate/shikimate deh 89.1 1.6 4.2E-05 23.3 6.2 24 6-29 10-37 (288)
462 PRK12829 short chain dehydroge 89.1 1.5 3.9E-05 23.5 6.1 36 2-37 10-46 (264)
463 PRK11730 fadB multifunctional 89.1 0.54 1.4E-05 26.6 3.7 80 213-301 460-540 (715)
464 pfam00899 ThiF ThiF family. Th 89.1 1.9 4.7E-05 23.0 7.9 35 4-38 2-37 (134)
465 KOG2304 consensus 89.0 0.34 8.6E-06 27.9 2.6 38 3-40 11-48 (298)
466 PRK11154 fadJ multifunctional 89.0 0.55 1.4E-05 26.5 3.7 79 213-301 457-536 (706)
467 PRK04690 murD UDP-N-acetylmura 88.9 1.1 2.8E-05 24.5 5.2 32 2-33 7-38 (468)
468 PRK08589 short chain dehydroge 88.7 1.9 5E-05 22.8 6.6 35 1-35 4-39 (272)
469 PRK07818 dihydrolipoamide dehy 88.7 1 2.5E-05 24.8 4.9 35 1-35 1-36 (467)
470 TIGR01035 hemA glutamyl-tRNA r 88.6 1.6 4E-05 23.5 5.8 68 2-70 184-257 (436)
471 PRK07063 short chain dehydroge 88.6 1.9 4.9E-05 22.9 6.3 63 1-63 5-77 (259)
472 PRK08945 short chain dehydroge 88.5 1.1 2.7E-05 24.6 5.0 36 1-36 11-47 (245)
473 TIGR01179 galE UDP-glucose 4-e 88.5 2 5.1E-05 22.7 6.7 65 5-69 1-81 (341)
474 PRK06924 short chain dehydroge 88.5 2 5.1E-05 22.7 6.5 35 4-38 2-37 (251)
475 PRK11036 putative metallothion 88.5 2 5.2E-05 22.7 6.6 130 5-143 47-206 (256)
476 cd00755 YgdL_like Family of ac 88.4 1.6 4E-05 23.5 5.8 36 2-37 10-46 (231)
477 PRK08294 phenol 2-monooxygenas 88.4 0.9 2.3E-05 25.1 4.5 41 5-45 34-75 (634)
478 TIGR01327 PGDH D-3-phosphoglyc 88.4 0.86 2.2E-05 25.2 4.4 66 2-73 138-203 (535)
479 TIGR02076 pyrH_arch uridylate 88.4 0.36 9.2E-06 27.7 2.5 31 3-33 36-69 (232)
480 PTZ00052 thioredoxin reductase 88.3 1.3 3.4E-05 23.9 5.4 30 6-35 44-73 (541)
481 cd00757 ThiF_MoeB_HesA_family 88.3 0.68 1.7E-05 25.9 3.8 35 2-36 20-55 (228)
482 PRK06718 precorrin-2 dehydroge 88.2 1.1 2.8E-05 24.5 4.9 38 1-38 8-45 (202)
483 TIGR01505 tartro_sem_red 2-hyd 88.2 0.54 1.4E-05 26.6 3.2 145 5-159 1-173 (291)
484 cd01492 Aos1_SUMO Ubiquitin ac 88.1 2.1 5.4E-05 22.6 7.5 37 2-38 20-57 (197)
485 PHA02518 ParA-like protein; Pr 88.1 2.1 5.5E-05 22.5 10.5 85 13-97 16-114 (211)
486 COG0446 HcaD Uncharacterized N 88.0 1.3 3.4E-05 23.9 5.1 33 6-38 1-35 (415)
487 PRK06223 malate dehydrogenase; 87.8 1.2 3.2E-05 24.1 4.9 108 5-130 2-125 (312)
488 PRK08415 enoyl-(acyl carrier p 87.8 2.2 5.7E-05 22.4 7.5 35 1-35 3-40 (274)
489 PRK07333 2-octaprenyl-6-methox 87.8 1.4 3.6E-05 23.7 5.2 35 3-37 1-37 (403)
490 PRK05249 soluble pyridine nucl 87.7 1.1 2.7E-05 24.6 4.5 34 3-36 6-39 (465)
491 PRK09078 sdhA succinate dehydr 87.7 1.4 3.6E-05 23.8 5.2 31 5-35 14-44 (598)
492 PRK07985 oxidoreductase; Provi 87.7 2.3 5.7E-05 22.4 6.5 34 1-34 47-81 (294)
493 KOG2157 consensus 87.7 2.3 5.8E-05 22.4 7.7 49 245-296 378-426 (497)
494 pfam00056 Ldh_1_N lactate/mala 87.6 2.2 5.6E-05 22.5 6.1 117 5-138 2-135 (142)
495 COG0665 DadA Glycine/D-amino a 87.6 1.7 4.3E-05 23.3 5.5 37 1-37 2-38 (387)
496 PRK10083 putative dehydrogenas 87.5 2.3 5.9E-05 22.3 6.4 17 280-296 285-301 (339)
497 KOG2311 consensus 87.4 1.5 3.9E-05 23.5 5.2 103 5-117 30-138 (679)
498 COG3967 DltE Short-chain dehyd 87.2 2.1 5.4E-05 22.5 5.8 64 1-64 3-71 (245)
499 cd05290 LDH_3 A subgroup of L- 87.2 0.92 2.3E-05 25.0 4.0 66 5-70 1-74 (307)
500 PRK08132 hypothetical protein; 87.2 1.3 3.2E-05 24.1 4.7 32 6-37 26-57 (549)
No 1
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit; InterPro: IPR005875 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This family represents PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, which catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. PurK belongs to the ATP grasp superfamily of C-N ligase enzymes. Each subunit of PurK is composed of three domains (A, B, and C). The B domain contains a flexible, glycine-rich loop (B loop, T123-G130) that is disordered in the sulphate-PurK structure and becomes ordered in the MgADP-PurK structure. MgADP is wedged between the B and C domains, as with all members of the ATP grasp superfamily. Other enzymes in this superfamily contain a conserved Omega loop proposed to interact with the B loop, define the specificity of their nonnucleotide substrate, and protect the acyl phosphate intermediate formed from this substrate. PurK contains a minimal Omega loop without conserved residues. In the reaction catalyzed by PurK, carboxyphosphate is the putative acyl phosphate intermediate. The sulphate of the sulphate ion-liganded PurK interacts electrostatically with Arg 242 and the backbone amide group of Asn 245, components of the J loop of the C domain. This sulphate may reveal the location of the carboxyphosphate binding site. Conserved residues within the C-terminus of the C domain define a pocket that is proposed to bind AIR in collaboration with an N-terminal strand loop helix motif in the A domain (P loop, G8-L1). The P loop is proposed to bind the phosphate of AIR on the basis of similar binding sites observed in PurN and PurE and proposed in PurD and PurT, four other enzymes in the purine pathway .; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process, 0009320 phosphoribosylaminoimidazole carboxylase complex.
Probab=100.00 E-value=0 Score=903.13 Aligned_cols=349 Identities=40% Similarity=0.673 Sum_probs=337.8
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC--EEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 89998098989999999988797899996767771342268--2798789999999999741999998772221133344
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSN--QQIAARHDDIKALNTFADICDYATYESENIPEKSISY 82 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad--~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l~~ 82 (354)
+|||||||||||||++||++||+++.|+++++++||.++|| .++.+++.|.+++.+|++.||+||||||||+..+|+.
T Consensus 1 ~vGilGGGQLG~M~~~aA~~LG~~~~VL~~~~~~PA~q~Ad~~~~v~a~~~d~~~i~~La~~cDviT~E~Ehv~~~~L~~ 80 (386)
T TIGR01161 1 TVGILGGGQLGRMLALAAKKLGIKVAVLDPDANSPAKQVADSREHVLASFTDPEAIRELAEACDVITFEFEHVDVEALEK 80 (386)
T ss_pred CEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCEEEEEECCCCCHHHHH
T ss_conf 96897188489999998712795899854898973111289855799851487899999976565543101378567899
Q ss_pred HHHC---CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC--HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 4302---0034876778763152788888765058867432100--0688886410013125540234675556645446
Q gi|254780158|r 83 LSTL---LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEIN--SQESLTNILGGFKGKGILKTRRLGYDGKGQKVYH 157 (354)
Q Consensus 83 l~~~---~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~--s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~ 157 (354)
|+.. ++++|+++++.++|||+.||++|+++|+|||+|..+. +.+++..+...+|+|+|||.++||||||||++++
T Consensus 81 L~~~g~~~~~~P~~~~l~~~~dk~~qK~~L~~~g~~vp~f~~~~~~~~~~~~~~~~~~g~p~VlK~~~gGYDGrGq~~i~ 160 (386)
T TIGR01161 81 LEARGDKVKVRPSPEALAIIQDKLTQKQFLQKLGLPVPPFVVIEIKDEEELDSALQELGFPVVLKARRGGYDGRGQFVIK 160 (386)
T ss_pred HHHCCCEEEEECCHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEC
T ss_conf 98359847760388999988365899999996689988412022368425789998739847998420652773108974
Q ss_pred CHHHHHHHHHHCCCC--CEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCC--CCEEEEEECC-CCCHHH---HHH
Q ss_conf 746778987513555--01011114564433201014665413997053345435--5505898527-878789---999
Q gi|254780158|r 158 ENDCTQNLYASLGNV--PLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVN--GILHKSIVPA-SISQKT---SLL 229 (354)
Q Consensus 158 ~~~~l~~~~~~~~~~--~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~--gil~~s~~Pa-~i~~~~---~~~ 229 (354)
+.++++.+++.+++. ++|+|+||+|++|+|||+||+.+|++.|||++||+|+| |||++|++|| .+++.+ +++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~E~fV~F~~Elsv~vaR~~~G~~~~YP~ven~~~ddagIl~~~~aPAPa~p~~~~Q~~~~ 240 (386)
T TIGR01161 161 SEADLPQALKELGDKEEELIVEEFVPFERELSVIVARSADGEIAFYPVVENIHQDDAGILRLVVAPAPAVPDALVQQQKK 240 (386)
T ss_pred CHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEECCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHH
T ss_conf 74328899985288840589852356200699999977897488828612356527787789863377783457899999
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEEC--CCC----EEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCC--CHH
Q ss_conf 9999886775402467753104553--884----08999412570456046210013588999999981889997--000
Q gi|254780158|r 230 AHSAMRKVLETLDYVGILCIEFFVT--NDG----NVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLGN--PNR 301 (354)
Q Consensus 230 a~~~a~~i~~~L~~~Gv~~VEffv~--~dg----~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~~--~~~ 301 (354)
|+++|+++++.|||+|||+||||++ +|| +|+|||+||||||||||||+||.|||||||||||||||||+ +.+
T Consensus 241 A~~~A~~~~~~L~~VG~~avE~F~~Pa~dGP~P~~LLvNElAPR~HNSGHyTlDgc~tSQFE~hLRAi~~LPLg~~~t~~ 320 (386)
T TIGR01161 241 AQELARRLAEELDYVGVLAVEMFLLPAKDGPEPDELLVNELAPRPHNSGHYTLDGCSTSQFEQHLRAILGLPLGSIFTEL 320 (386)
T ss_pred HHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999986196178889998306887895120566102578898412656654331799999997088987444100
Q ss_pred CCC---EEEEEEECCC-----CCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEECCCC
Q ss_conf 485---6799975577-----022788972899689970887689797425998726888
Q gi|254780158|r 302 HSN---CVMYNIIGSD-----IDQYEQWLHCDSSVIHIYGKSQTLCGRKMGHVTQIYPKN 353 (354)
Q Consensus 302 ~~~---~~m~nilg~~-----~~~~~~~~~~~~~~~~~YgK~~~r~~RkmGHvt~~~~~~ 353 (354)
..| |+|+||||.+ .+.++..+..|+++||||||+|+||||||||||++.++-
T Consensus 321 ~~PTT~~~MVNlLG~~~~~~~~~~~~~~~~~P~a~lhwYGK~E~RpgRK~GH~n~~~~~~ 380 (386)
T TIGR01161 321 LLPTTQAVMVNLLGTEGPDEVAPLWEELLALPGAKLHWYGKAEVRPGRKVGHVNLVGSDL 380 (386)
T ss_pred CCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCEEECCCCCEEEEEECCCCH
T ss_conf 278430578988335676266788999973898478875460037896101686338683
No 2
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=100.00 E-value=0 Score=888.60 Aligned_cols=351 Identities=46% Similarity=0.779 Sum_probs=343.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHH
Q ss_conf 98878999809898999999998879789999676777134226827987899999999997419999987722211333
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEKSI 80 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l 80 (354)
++.+||||||||||||||++||++||++|+++||++++||.++||+++.++|+|.+++.+|+++||+|||||||||.++|
T Consensus 5 ~p~~tIGIlGgGQLgrMla~aA~~lG~~v~vldp~~~~PA~~va~~~~~~~~~D~~al~~fa~~~DviT~E~EnI~~~~L 84 (377)
T PRK06019 5 LPGKTIGIIGGGQLGRMLALAAAPLGYKVIVLDPDADCPAAQVADRVIVADYDDVAALRELAEQCDVITYEFENVPAEAL 84 (377)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCHHHH
T ss_conf 99999999878689999999999789989998489849847837848986889899999998459999978176899999
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHH
Q ss_conf 44430200348767787631527888887650588674321000688886410013125540234675556645446746
Q gi|254780158|r 81 SYLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHEND 160 (354)
Q Consensus 81 ~~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~ 160 (354)
+.|++.++++|++++++++|||..||+||+++|||||||..+++.+|+.++++++|||+|+|++++|||||||+++++.+
T Consensus 85 ~~le~~~~v~P~~~al~i~QdR~~eK~~l~~lgiptapf~~v~s~~dl~~~~~~lg~P~vlKt~~~GYDGKGq~~i~s~~ 164 (377)
T PRK06019 85 DLLAARVPVPPGPDALAIAQDRLTEKQFLDELGIPVAPFALVDSAEDLDAAIADLGLPAVLKTRRGGYDGKGQWVLRSEA 164 (377)
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCHH
T ss_conf 99970896687989999886279999999976999888067189999999999729976995133461887018977888
Q ss_pred HHHHHHHHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 77898751355501011114564433201014665413997053345435550589852787878999999998867754
Q gi|254780158|r 161 CTQNLYASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGILHKSIVPASISQKTSLLAHSAMRKVLET 240 (354)
Q Consensus 161 ~l~~~~~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~ 240 (354)
|++.+|..+++.+||+|+||+|++|+||+++|+.+|++++||++||+|+||||++|++||++++++.++|+++|.+++++
T Consensus 165 dl~~a~~~l~~~~~i~E~~i~f~~ElSvivaR~~~G~~~~yP~~en~h~~gil~~s~~Pa~~~~~~~~~a~~ia~~i~~~ 244 (377)
T PRK06019 165 DLDAAWAALGSGPCILEEFVPFEREVSVIVARGRDGEVVFYPLVENVHRNGILRTSIAPAPISADLQAQAEEIASRIAEE 244 (377)
T ss_pred HHHHHHHHCCCCCEEEEEEECCEEEEEEEEEECCCCCEEEECCHHCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999986569988999654351899999998489999994441147777755899889999999999999999999997
Q ss_pred CCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHCCCEEEEEEECCC-CCCHH
Q ss_conf 02467753104553884089994125704560462100135889999999818899970004856799975577-02278
Q gi|254780158|r 241 LDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLGNPNRHSNCVMYNIIGSD-IDQYE 319 (354)
Q Consensus 241 L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~~~~~~~~~~m~nilg~~-~~~~~ 319 (354)
|+|+|||+||||+++|| ||||||||||||||||||++|++||||||+||||||||+++.+..|++|+||||++ .+.++
T Consensus 245 l~~vGvl~VE~F~~~~~-llvNEiAPRpHNSGH~Ti~~~~~SQFe~HlRAi~glpl~~~~~~~pa~M~NilG~~~~~~~~ 323 (377)
T PRK06019 245 LDYVGVLAVEFFVTGDG-LLVNEIAPRVHNSGHWTIDACSTSQFEQHLRAIAGLPLGSTELLSPAVMVNLLGDDVEPDWD 323 (377)
T ss_pred CCCCCEEEEEEEEECCC-EEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHH
T ss_conf 48762499999991893-89997258876875476423412489999999829988885444766999983775313699
Q ss_pred HHHCCCCCEEEECCCCCCCCCCEEEEEEEECCC
Q ss_conf 897289968997088768979742599872688
Q gi|254780158|r 320 QWLHCDSSVIHIYGKSQTLCGRKMGHVTQIYPK 352 (354)
Q Consensus 320 ~~~~~~~~~~~~YgK~~~r~~RkmGHvt~~~~~ 352 (354)
+++..++|++|||||+++||||||||||+++++
T Consensus 324 ~~~~~~~~~~h~YgK~e~r~gRKmGHit~~~~~ 356 (377)
T PRK06019 324 DLLALPGAHLHWYGKAEARPGRKMGHVTVLGDD 356 (377)
T ss_pred HHHHCCCCEEEECCCCCCCCCCCEEEEEEECCC
T ss_conf 997199988997689878899826899983199
No 3
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=100.00 E-value=0 Score=859.77 Aligned_cols=350 Identities=44% Similarity=0.718 Sum_probs=337.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHH
Q ss_conf 87899980989899999999887978999967677713422682798789999999999741999998772221133344
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEKSISY 82 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l~~ 82 (354)
.+||||||||||||||++||++||++|+++||+++|||.++|+.++.++|+|.+++.+|+++||+|||||||||.++|+.
T Consensus 1 ~~tvgIlGGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va~~~i~~~~dD~~al~ela~~~DViT~EfE~V~~~aL~~ 80 (375)
T COG0026 1 MKTVGILGGGQLGRMMALAAARLGIKVIVLDPDADAPAAQVADRVIVAAYDDPEALRELAAKCDVITYEFENVPAEALEK 80 (375)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCEEECCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHH
T ss_conf 97699976869999999999864977999569999963341431541577888999999862988998514698899999
Q ss_pred HHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 43020034876778763152788888765058867432100068888641001312554023467555664544674677
Q gi|254780158|r 83 LSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCT 162 (354)
Q Consensus 83 l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l 162 (354)
++..++++|++++++++|||+.||+||+++|+|||||..+++.+|+.+++..+|+|+|||+++||||||||+++++.+++
T Consensus 81 l~~~~~v~p~~~~l~~~qdR~~eK~~l~~~Gi~va~~~~v~~~~el~~~~~~~g~p~VlKtr~gGYDGkGQ~~i~~~~~~ 160 (375)
T COG0026 81 LAASVKVFPSPDALRIAQDRLVEKQFLDKAGLPVAPFQVVDSAEELDAAAADLGFPAVLKTRRGGYDGKGQWRIRSDADL 160 (375)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCC
T ss_conf 99616769998998877668999999997699999827857988999999975995699832265668870894070102
Q ss_pred HHHHHHCC-CCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 89875135-55010111145644332010146654139970533454355505898527878789999999988677540
Q gi|254780158|r 163 QNLYASLG-NVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGILHKSIVPASISQKTSLLAHSAMRKVLETL 241 (354)
Q Consensus 163 ~~~~~~~~-~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L 241 (354)
+..++... ...+++|+||+|++|+||+++|+.+|++.+||++||+|+||||++|++||++++.++++|++++.+|+++|
T Consensus 161 ~~~~~~~~~~~~~vlE~fV~F~~EiSvi~aR~~~G~~~~yP~~eN~h~~gIl~~siaPa~i~~~~~~~A~~~a~~i~~~L 240 (375)
T COG0026 161 ELRAAGLAEGGVPVLEEFVPFEREISVIVARSNDGEVAFYPVAENVHRNGILRTSIAPARIPDDLQAQAEEMAKKIAEEL 240 (375)
T ss_pred HHHHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCEEEECCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 35676651368636886035664899999985899789806621013367899997237689899999999999999975
Q ss_pred CCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHCCCEEEEEEECCCCCC--HH
Q ss_conf 2467753104553884089994125704560462100135889999999818899970004856799975577022--78
Q gi|254780158|r 242 DYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLGNPNRHSNCVMYNIIGSDIDQ--YE 319 (354)
Q Consensus 242 ~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~~~~~~~~~~m~nilg~~~~~--~~ 319 (354)
+|+|||+||||+++||+|++||||||||||||||+++|.+||||||||||||||||++.+..|++|+||||.+.+. ++
T Consensus 241 ~yvGVl~vE~Fv~~dg~llvNEiAPRvHNSGH~T~~gc~~SQFEqHlRAv~glPLg~~~~~~p~vMvNlLG~~~~~~~~~ 320 (375)
T COG0026 241 DYVGVLAVEFFVTPDGELLVNEIAPRVHNSGHWTIDGCETSQFEQHLRAVLGLPLGSTTLLSPSVMVNLLGDDVPPDDVK 320 (375)
T ss_pred CCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHH
T ss_conf 94578999999978984898613689878665123312124899999998299999754247607999517777613468
Q ss_pred HHHCCCCCEEEECCCCCCCCCCEEEEEEEECCC
Q ss_conf 897289968997088768979742599872688
Q gi|254780158|r 320 QWLHCDSSVIHIYGKSQTLCGRKMGHVTQIYPK 352 (354)
Q Consensus 320 ~~~~~~~~~~~~YgK~~~r~~RkmGHvt~~~~~ 352 (354)
.++..|++++|||||.|+||||||||||+++++
T Consensus 321 ~~l~~p~~~lH~YGK~e~R~gRKmGHvn~~~~~ 353 (375)
T COG0026 321 AVLALPGAHLHWYGKAEARPGRKMGHVNVLGSD 353 (375)
T ss_pred HHHHCCCCEEEEECCCCCCCCCEEEEEEEECCC
T ss_conf 897499978997057657799733568861597
No 4
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=100.00 E-value=0 Score=804.73 Aligned_cols=349 Identities=26% Similarity=0.380 Sum_probs=331.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHC--CEEEECCCCCCHHH
Q ss_conf 8878999809898999999998879789999676777134226827987899999999997419--99998772221133
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADIC--DYATYESENIPEKS 79 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~--Dvit~E~E~i~~~~ 79 (354)
+.|||||||||||||||++||++||++|+++|+++++||.++||++++++|+|.+++.+|+++| |+||||||||+.++
T Consensus 11 ~~kkIgIlGgGQLg~Mla~aA~~LG~~vivld~~~d~PA~~vAd~~~~~~~~D~~al~~~a~~~~~DvvT~E~E~V~~~~ 90 (395)
T PRK09288 11 SATRVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSHVIDMLDGDALRAVIEREKPDLIVPEIEAIATDA 90 (395)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCHHH
T ss_conf 98889998988999999999998799899984899594467286579778789999999999838998997854478899
Q ss_pred HHHHHH-CCCCCCCHHHHHHHHCCHHHHHHH-HHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 344430-200348767787631527888887-650588674321000688886410013125540234675556645446
Q gi|254780158|r 80 ISYLST-LLPTYPSSRAIEISQDRLYEKKFF-QESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYH 157 (354)
Q Consensus 80 l~~l~~-~~~v~P~~~al~~~~dK~~~K~~l-~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~ 157 (354)
|..+++ +++++|++++++++|||..+|+++ +++|||||+|..+++.+|+.++++++|||+|+||+ +|||||||++++
T Consensus 91 L~~le~~G~~v~Ps~~al~i~qdR~~~k~~~~~~lgIPt~~f~~v~s~~el~~~~~~lG~P~vlK~~-~G~DGKGq~~v~ 169 (395)
T PRK09288 91 LVELEAEGFNVVPTARATRLTMNREGIRRLAAEELGLPTSPYRFADSLEELRAAVEEIGYPCVVKPV-MSSSGKGQSVVR 169 (395)
T ss_pred HHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCEEEECC-CCCCCCCEEEEC
T ss_conf 9999868933679999999987678999999974699999954708999999999982987587224-157887528966
Q ss_pred CHHHHHHHHHHC------CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf 746778987513------55501011114564433201014665413997053345435550589852787878999999
Q gi|254780158|r 158 ENDCTQNLYASL------GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGILHKSIVPASISQKTSLLAH 231 (354)
Q Consensus 158 ~~~~l~~~~~~~------~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil~~s~~Pa~i~~~~~~~a~ 231 (354)
+.+|++.+|+.. +..++|+|+||+|++|+||+++|+.+|++.+|||+||+|++|||..|++||++++++.++|+
T Consensus 170 ~~~dl~~a~~~a~~~~~~~~~~~ivE~~v~f~~E~Svi~aR~~~g~~~~~~pve~~~~~gil~~s~~Pa~i~~~v~~~a~ 249 (395)
T PRK09288 170 SPEDIEAAWEYAQEGGRGGAGRVIVEEFIDFDYEITLLTVRAVDGGTHFCAPIGHRQEDGDYRESWQPQPMSPAALEEAQ 249 (395)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEEEECCCCCEEECCEEEEEECCCCCCHHHHHHHH
T ss_conf 87888999999985075789708998885361799999999699988996685425533427997157789999999999
Q ss_pred HHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHCCCEEEEEEE
Q ss_conf 99886775402467753104553884089994125704560462100135889999999818899970004856799975
Q gi|254780158|r 232 SAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLGNPNRHSNCVMYNII 311 (354)
Q Consensus 232 ~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~~~~~~~~~~m~nil 311 (354)
++|++++++|+|+|+|+||||+++| ++|||||||||||||||||++|.+||||||+|||||||||+|++..|++|+|+|
T Consensus 250 ~ia~~i~~~L~~vGvl~VEfFv~~d-~llvNEiAPR~HNSGH~Ti~~~~~sQFe~hlRai~glPlg~~~~~~p~a~~~~l 328 (395)
T PRK09288 250 EIAKKVTDALGGRGLFGVELFVKGD-EVYFSEVSPRPHDTGMVTLISQNLSEFELHARAILGLPIPDIRLYGPAASAVIL 328 (395)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEECC-EEEEEEECCCCCCCCEEEEHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
T ss_conf 9999999974871448899999789-089999207877862176210354199999999809988985203673799995
Q ss_pred CCC------CCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEECCC
Q ss_conf 577------02278897289968997088768979742599872688
Q gi|254780158|r 312 GSD------IDQYEQWLHCDSSVIHIYGKSQTLCGRKMGHVTQIYPK 352 (354)
Q Consensus 312 g~~------~~~~~~~~~~~~~~~~~YgK~~~r~~RkmGHvt~~~~~ 352 (354)
|+. ++.++.++..|++++|||||+++||||||||||+++++
T Consensus 329 g~~~~~~~~~~~~~~~~~~p~~~~h~YGK~~~r~gRKmGHvt~~g~~ 375 (395)
T PRK09288 329 AEGESANPSFDGLAEALAVPGTDVRLFGKPEIRGGRRMGVALATAED 375 (395)
T ss_pred CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECC
T ss_conf 26667786634699997199987999289999899833899986099
No 5
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=100.00 E-value=0 Score=570.62 Aligned_cols=346 Identities=26% Similarity=0.400 Sum_probs=327.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH--HCCEEEECCCCCCHHHHH
Q ss_conf 789998098989999999988797899996767771342268279878999999999974--199999877222113334
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD--ICDYATYESENIPEKSIS 81 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~--~~Dvit~E~E~i~~~~l~ 81 (354)
+||++||+|+||++++++|||||.+|+++|.+.++||+++|+..++++|.|.++|.++++ ++|.|++|+|.|.++.|.
T Consensus 13 ~kvmLLGSGELGKEvaIe~QRLG~eVIAVDrY~~APAmqVAhrs~Vi~MlD~~al~avv~re~Pd~IVpEiEAI~td~L~ 92 (394)
T COG0027 13 TKVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAIATDALV 92 (394)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
T ss_conf 48999638864469999888638779996376898066421111345456999999999865898133135666478899
Q ss_pred HHHH-CCCCCCCHHHHHHHHCCHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCH
Q ss_conf 4430-2003487677876315278888876-5058867432100068888641001312554023467555664544674
Q gi|254780158|r 82 YLST-LLPTYPSSRAIEISQDRLYEKKFFQ-ESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHEN 159 (354)
Q Consensus 82 ~l~~-~~~v~P~~~al~~~~dK~~~K~~l~-~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~ 159 (354)
.+++ +..+.|++.|.++++||...|+++. ++|+||++|.+++|++++.++++++||||++||. +|++||||++++++
T Consensus 93 elE~~G~~VVP~ArAt~ltMnRegiRrlAAeeLglpTs~Y~fa~s~~e~~~a~~~iGfPcvvKPv-MSSSGkGqsvv~~~ 171 (394)
T COG0027 93 ELEEEGYTVVPNARATKLTMNREGIRRLAAEELGLPTSKYRFADSLEELRAAVEKIGFPCVVKPV-MSSSGKGQSVVRSP 171 (394)
T ss_pred HHHHCCCEECCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCC-CCCCCCCCEEECCH
T ss_conf 99867966755327777342689899988997299976632135599999999974997021332-02688982143598
Q ss_pred HHHHHHHHHC------CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 6778987513------5550101111456443320101466541399705334543555058985278787899999999
Q gi|254780158|r 160 DCTQNLYASL------GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGILHKSIVPASISQKTSLLAHSA 233 (354)
Q Consensus 160 ~~l~~~~~~~------~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil~~s~~Pa~i~~~~~~~a~~~ 233 (354)
++++.+|+.. ++..+|+|+||+|+.|++++++|..+|...||.|+++.+.+|+|++||+|+.+|+...++++.+
T Consensus 172 e~ve~AW~~A~~g~R~~~~RVIVE~fv~fd~EITlLtvr~~~~~~~Fc~PIGHrq~dgdY~ESWQP~~mS~~al~~A~~I 251 (394)
T COG0027 172 EDVEKAWEYAQQGGRGGSGRVIVEEFVKFDFEITLLTVRAVDGTGSFCAPIGHRQEDGDYRESWQPQEMSEAALEEAQSI 251 (394)
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHH
T ss_conf 78899999997547888871899987323279999999975588776777664057887010368410389999999999
Q ss_pred HHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHCCCEEEEEEECC
Q ss_conf 88677540246775310455388408999412570456046210013588999999981889997000485679997557
Q gi|254780158|r 234 MRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLGNPNRHSNCVMYNIIGS 313 (354)
Q Consensus 234 a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~~~~~~~~~~m~nilg~ 313 (354)
|+++.++||+.|+|+||||+++| ++||+|++||||+||++|+-+++.|.|++|+|||+|||++++.+.+|++...|+.+
T Consensus 252 A~~vt~aLGG~GlFGVElfv~gD-eV~FsEVSPRPHDTGmVTLiSq~lsEF~LH~RAiLGLPi~~i~~~~P~AS~vI~~~ 330 (394)
T COG0027 252 AKRVTDALGGRGLFGVELFVKGD-EVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAILGLPIPEIRQISPAASAVILAQ 330 (394)
T ss_pred HHHHHHHHCCCCCEEEEEEEECC-EEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEECC
T ss_conf 99999860586303689997288-78985257898887249997065318999999995897642145254300156033
Q ss_pred C------CCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEECC
Q ss_conf 7------0227889728996899708876897974259987268
Q gi|254780158|r 314 D------IDQYEQWLHCDSSVIHIYGKSQTLCGRKMGHVTQIYP 351 (354)
Q Consensus 314 ~------~~~~~~~~~~~~~~~~~YgK~~~r~~RkmGHvt~~~~ 351 (354)
. +......+..|++.+++||||+++++|+||..-..++
T Consensus 331 ~~~~~~~f~~l~~AL~~p~t~vRlFGKP~~~~~RRmGVaLA~a~ 374 (394)
T COG0027 331 ETSQAPTFDGLAEALGVPDTQVRLFGKPEADGGRRLGVALATAE 374 (394)
T ss_pred CCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCC
T ss_conf 33467752228887458986179806875666750468984276
No 6
>pfam02222 ATP-grasp ATP-grasp domain. This family does not contain all known ATP-grasp domain members. This family includes a diverse set of enzymes that possess ATP-dependent carboxylate-amine ligase activity.
Probab=100.00 E-value=0 Score=349.52 Aligned_cols=171 Identities=37% Similarity=0.651 Sum_probs=167.4
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCC
Q ss_conf 76505886743210006888864100131255402346755566454467467789875135550101111456443320
Q gi|254780158|r 109 FQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASLGNVPLILERFTDFNCEISI 188 (354)
Q Consensus 109 l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~~~~~~iiEe~I~~~~Eisv 188 (354)
|+++|||||+|..+.+.+|+.++++++|||+|+||+.+||||+|++++++.+|++.+++.+.+.++++|+||++++|+++
T Consensus 1 l~~~Giptp~~~~i~~~~d~~~~~~~iGyP~vvKp~~~G~~g~G~~~v~~~~el~~a~~~~~~~~~liE~~I~~~~Ei~~ 80 (171)
T pfam02222 1 LQKLGLPTPRFMAAESLEELIEAGQELGYPCVLKARRGGYDGKGQYVVRSEADIPQAWEELGGGPVIVEEFVPFDKELSV 80 (171)
T ss_pred CHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEECCCCEEEEE
T ss_conf 90209899995498999999999997099789996110258985289889999999998558995799860467579998
Q ss_pred EECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCC
Q ss_conf 10146654139970533454355505898527878789999999988677540246775310455388408999412570
Q gi|254780158|r 189 IAARSLNGSICFYDPIQNTHVNGILHKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRV 268 (354)
Q Consensus 189 iv~r~~~G~~~~~p~~en~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~ 268 (354)
+++|+.+|++.+||++|++|++|++.++++|++++++++++++++|.+++++|||+|+++||||+++||++|||||||||
T Consensus 81 ~~~r~~~g~~~~~~~~e~~~~~g~~~~~~~Pa~~~~~~~~~i~~~a~ki~~aLg~~G~~~veff~~~dG~~~v~EvnpR~ 160 (171)
T pfam02222 81 LVVRSVDGETAFYPPVETIQEDGICHESVAPARVPDSQQAKAQEIAKKIVDELGGVGIFGVELFVLPDGDLLVNELAPRP 160 (171)
T ss_pred EEEECCCCCEEECCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCC
T ss_conf 74344999899803546688678189874288889899999999999999983970459999999399979999964996
Q ss_pred CCCEEEEHHHC
Q ss_conf 45604621001
Q gi|254780158|r 269 HNSGHWTEASC 279 (354)
Q Consensus 269 Hnsgh~t~~~~ 279 (354)
||||||||++|
T Consensus 161 h~sg~~~~~~~ 171 (171)
T pfam02222 161 HNSGHYTLDGC 171 (171)
T ss_pred CCCCCCCCCCC
T ss_conf 77576521169
No 7
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2; InterPro: IPR005862 The formation of isosinate, a precursor of adenylate and guanylate, from 5-phosphoribosyl 1-pyrophosphate in the de novo purine biosynthesis pathway is basically composed of 10 steps of reactions . Phosphoribosylglycinamide formyltransferase 2 (2.1.2 from EC) is an alternative enzyme to phosphoribosylglycinamide formyltransferase that catalyzes the third step in the de novo purine biosynthesis pathway. ; GO: 0016742 hydroxymethyl- formyl- and related transferase activity, 0009113 purine base biosynthetic process.
Probab=100.00 E-value=0 Score=334.12 Aligned_cols=345 Identities=25% Similarity=0.372 Sum_probs=314.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH--HCCEEEECCCCCCHHHHHH
Q ss_conf 89998098989999999988797899996767771342268279878999999999974--1999998772221133344
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD--ICDYATYESENIPEKSISY 82 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~--~~Dvit~E~E~i~~~~l~~ 82 (354)
++.++|+|++|++++.+++++|.+++.+|.+.++|++++++..++.++.|.+.+..+.+ ++|.+..+.|.+..+.+..
T Consensus 1 ~~~l~g~g~~g~~~~~~~~~lg~~~~~~d~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~p~~~~p~~~~~~~~~l~~ 80 (407)
T TIGR01142 1 RVLLLGSGELGKEVAIEAQRLGVEVIAVDRYADAPALQVAHRSYVIDLLDGDALRAVIEREKPDYIVPEIEAIATDALLE 80 (407)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 94661376533144444543471268733545762133321111000026789999987506741000244554666776
Q ss_pred HHH-C---CCCCCCHHHHHHHHCCHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 430-2---003487677876315278888876-50588674321000688886410013125540234675556645446
Q gi|254780158|r 83 LST-L---LPTYPSSRAIEISQDRLYEKKFFQ-ESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYH 157 (354)
Q Consensus 83 l~~-~---~~v~P~~~al~~~~dK~~~K~~l~-~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~ 157 (354)
++. + ..+.|+..+..+++||...|++.. ++|+|+.+|....+.+++.+....+||||++||.. +.+|+|+.+++
T Consensus 81 ~~~~gg~c~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~p~~~~p~~-~~~g~g~~~~~ 159 (407)
T TIGR01142 81 LEAEGGECYTVVPTARATKLTLNREGLRRLAAEELGLPTAPYEFADSLEELREAVEKIGFPCVVKPVL-SSSGKGQSVVR 159 (407)
T ss_pred HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHH-CCCCCCCEEEC
T ss_conf 65248824664035202221210567787767763254220011101788999998607750001221-14666530004
Q ss_pred CHHHHHHHHHHCC-----------CCCEEHHHCCCCCCCCCCEECCCCCC---CEEEEECCCCCCCCCCEEEEEECCCCC
Q ss_conf 7467789875135-----------55010111145644332010146654---139970533454355505898527878
Q gi|254780158|r 158 ENDCTQNLYASLG-----------NVPLILERFTDFNCEISIIAARSLNG---SICFYDPIQNTHVNGILHKSIVPASIS 223 (354)
Q Consensus 158 ~~~~l~~~~~~~~-----------~~~~iiEe~I~~~~Eisviv~r~~~G---~~~~~p~~en~~~~gil~~s~~Pa~i~ 223 (354)
.+++++.+|.... ...+++|+|++|+.|++++.+|..+| .+.|+.|+.+.+.+|.+..+|.|..++
T Consensus 160 ~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~g~~~~~g~~~~~w~p~~~~ 239 (407)
T TIGR01142 160 GPEDLEKAWEYAKGHQVQEGGRGGAGRVIVEEFIDFDYEITLLTVRAVDGNGPLTTFCAPIGHRQEDGDYHESWQPQELS 239 (407)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHEEEECCCCCCEEEECCCCCCCCCCCCCHHCCCCHHHH
T ss_conf 73456788766504310113455556245520013102110000000277775011013224300155400014621221
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHC--CCCHHHHHHHHHHCCCCC----
Q ss_conf 78999999998867754024677531045538840899941257045604621001--358899999998188999----
Q gi|254780158|r 224 QKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASC--VISQFEQHIRSITNLPLG---- 297 (354)
Q Consensus 224 ~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~--~~sqfe~h~rai~glpl~---- 297 (354)
....++++.++.++.++|+..|+|++|+|+.+| +++++|+.||||++|..|+.+. +.|+|+.|+|+++|+|++
T Consensus 240 ~~~~~~~~~~~~~~~~~lgg~g~~g~~~~~~g~-~~~~~~~~p~p~~~g~~~~~~~pp~~~~~~~~~~~~~g~p~~g~w~ 318 (407)
T TIGR01142 240 EKALEEAKRIAKRVTDALGGYGLFGVELFVKGD-EVWFSEVSPRPHDTGLVTLISQPPDLSEFALHLRAILGLPVPGEWV 318 (407)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC-EEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 788999999998888763466400144565166-1354204667666513787406887204665445542366675100
Q ss_pred ----CCHHCCCEEEEEEECCC------CCC------HHHHHCCCCCEEEECCCCCCCCCCEEEEEEEECC
Q ss_conf ----70004856799975577------022------7889728996899708876897974259987268
Q gi|254780158|r 298 ----NPNRHSNCVMYNIIGSD------IDQ------YEQWLHCDSSVIHIYGKSQTLCGRKMGHVTQIYP 351 (354)
Q Consensus 298 ----~~~~~~~~~m~nilg~~------~~~------~~~~~~~~~~~~~~YgK~~~r~~RkmGHvt~~~~ 351 (354)
......|+....++... +.. ....+..++..+++|||++.+++|+||......+
T Consensus 319 ~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~g~p~~~~~~~~g~~l~~~~ 388 (407)
T TIGR01142 319 DGYRLIKQLGPGASAVILADGEGGKLAFGGAPPADALEDALGVPDTDVRLFGKPEAKGGRRLGVALATAE 388 (407)
T ss_pred CCHHHHHHCCCCHHHHHHCHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCH
T ss_conf 1112222115410012200000011223567733455654315543056621643333321012220220
No 8
>pfam02786 CPSase_L_D2 Carbamoyl-phosphate synthase L chain, ATP binding domain. Carbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesize carbamoyl phosphate. See pfam00988. The small chain has a GATase domain in the carboxyl terminus. See pfam00117. The ATP binding domain (this one) has an ATP-grasp fold.
Probab=100.00 E-value=7e-39 Score=281.65 Aligned_cols=198 Identities=19% Similarity=0.201 Sum_probs=173.9
Q ss_pred CCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC--------C
Q ss_conf 52788888765058867432--1000688886410013125540234675556645446746778987513--------5
Q gi|254780158|r 101 DRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASL--------G 170 (354)
Q Consensus 101 dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~--------~ 170 (354)
||..+|++++++|+|+|||. .+.+.+|+.++++++|||+|+||+.+| +|+|++++++.+|++++++.. +
T Consensus 1 Dk~~~k~~l~~~GvP~~~~~~~~~~s~ee~~~~a~~iG~PvvvKp~~~g-~g~G~~~v~~~~eL~~a~~~a~~~a~~~~~ 79 (211)
T pfam02786 1 DKVLFKAAMKEAGVPTVPGTAGPVETEEEALAAAKEIGYPVIIKAAFGG-GGLGMGIARNEEELAELFALALAEAPAAFG 79 (211)
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCC-CCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9899999999869891998788879999999999985997899737778-998751241277899999999875143169
Q ss_pred CCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCC-CCCCCEEEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 5501011114564433201014665413997053345-43555058985278-787899999999886775402467753
Q gi|254780158|r 171 NVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNT-HVNGILHKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILC 248 (354)
Q Consensus 171 ~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~-~~~gil~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~ 248 (354)
+.++++|+||++.+|+++.++++..|++..+...++. +.........+|+. +++++.+++++++.+++++||+.|+++
T Consensus 80 ~~~vlvEe~i~g~~ei~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Pa~~l~~~~~e~i~~~a~~~~~~lg~~G~~~ 159 (211)
T pfam02786 80 NPQVLVEKSLKGPKHIEYQVLRDAHGNCITVCNRECSDQRRTQKSIEVAPSQTLTDEERQMLREAAVKIARHLGYVGAGT 159 (211)
T ss_pred CCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEECCCE
T ss_conf 98389974047765899999982799899999633225033584446817999999999999999999875264423324
Q ss_pred CEEEEC-CCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 104553-884089994125704560462100135889999999818899970
Q gi|254780158|r 249 IEFFVT-NDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLGNP 299 (354)
Q Consensus 249 VEffv~-~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~~~ 299 (354)
||||++ .+|++||+||+||+|+|++||..++.+++|+.|+|+++|+||++.
T Consensus 160 vef~~~~~~~~~~~iEvNpR~~~~~~~t~~~tg~~l~~~~~~~a~G~~l~e~ 211 (211)
T pfam02786 160 VEFALDPFSGEYYFIEMNTRLQVSHALAEKATGYDLAKEAAKIALGYPLPEL 211 (211)
T ss_pred EEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
T ss_conf 7899967999599996708968347788998794899999999779997869
No 9
>PRK05586 biotin carboxylase; Validated
Probab=100.00 E-value=3.9e-36 Score=263.17 Aligned_cols=318 Identities=17% Similarity=0.220 Sum_probs=260.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE--ECCCCCCHHHCCCEEEEC-------CCCCHHHHHHHHHH--CCEEEE--
Q ss_conf 78999809898999999998879789999--676777134226827987-------89999999999741--999998--
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVIL--DPDSNCPANQVSNQQIAA-------RHDDIKALNTFADI--CDYATY-- 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~--d~~~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~~--~Dvit~-- 70 (354)
|||+|-.-|+.|.-.+.+|++||++++++ +.+.+++..+.||+.+.. +|.|.+++.+.++. ||+|-+
T Consensus 3 ~kvLIANRGEIA~Ri~rt~~~lgi~tVavys~~D~~a~hv~~Ade~~~lg~~~~~~sYln~~~ii~~A~~~g~dAihPGY 82 (447)
T PRK05586 3 KKILIANRGEIAVRIIRACREMGIETVAVYSEIDKDALHVQLADEAVCIGPASSKDSYLNIYNILSATVLTGAQAIHPGF 82 (447)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCEEEECCCCCHHHHHCCHHHHHHHHHHHCCCEEECCC
T ss_conf 54999898799999999999839959999170336785476498998739999565114899999999984998997185
Q ss_pred --CCCCCCHHHHHHHHH-C-CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf --772221133344430-2-0034876778763152788888765058867432--100068888641001312554023
Q gi|254780158|r 71 --ESENIPEKSISYLST-L-LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 71 --E~E~i~~~~l~~l~~-~-~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
-.||- +..+.+++ + .-+-|++++++...||...|+++.++|+|+.|+. .+.+.+++.++++++|||+++|+.
T Consensus 83 GFLSEna--~Fa~~~~~~Gi~fIGP~~~~i~~~GdK~~ar~~a~~~gvPv~pg~~~~v~~~~ea~~~a~~iGyPv~lKAa 160 (447)
T PRK05586 83 GFLSENS--KFAKMCKECNIVFIGPDSETIELMGNKSNAREIMKKAGVPVVPGSEGEIENEEEALKIAEEIGYPVMVKAS 160 (447)
T ss_pred CHHHCCH--HHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECC
T ss_conf 5322389--99999998798798959999998538499999999849976568688889999999999862982376305
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHH--------HCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCC-CCEE
Q ss_conf 46755566454467467789875--------13555010111145644332010146654139970533-45435-5505
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYA--------SLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVN-GILH 214 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~--------~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~-gil~ 214 (354)
.|| .|||..++++.+++..+++ .+++..+++|+||+..|++.|.+.+|..|++..+.--+ .+|+. +.+.
T Consensus 161 ~GG-GGrGmriv~~~~el~~~~~~a~~ea~~aFg~~~v~vEk~i~~~RHIEVQvl~D~~Gn~vhlgeRdCSiQRr~QKvI 239 (447)
T PRK05586 161 AGG-GGRGIRIVRSEEELIKAFNTAKSEAKAAFGDDSMYIEKFIENPRHIEFQILGDNYGNVVHLGERDCSLQRRNQKVL 239 (447)
T ss_pred CCC-CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEE
T ss_conf 699-9773699899999999999999999982799846887724787179999997079988884064246656886379
Q ss_pred EEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHC
Q ss_conf 8985278-787899999999886775402467753104553884089994125704560462100135889999999818
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITN 293 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~g 293 (354)
-.+|+. +++++++++.+.|.+++++++|.|+.+|||.+++||++||.||+||..=---+|...+.++--++++|...|
T Consensus 240 -EeaPap~l~~~~r~~m~~~A~~la~~vgY~gaGTvEFl~d~~~~fyFlEvNtRlQVEH~VTE~vtGvDLV~~Qi~iA~G 318 (447)
T PRK05586 240 -EEAPSPVMTEELRKKMGEIAVKAAKAVNYKNAGTIEFLLDKDGNFYFMEMNTRIQVEHPITEMITGVDLVKEQIKIAYG 318 (447)
T ss_pred -EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCC
T ss_conf -9889998889999999999998888606033324788875899789993343555566411000377689999998679
Q ss_pred CCCCCC----HHCCCEEEEEEECCCCCCHHHHHCCCCC
Q ss_conf 899970----0048567999755770227889728996
Q gi|254780158|r 294 LPLGNP----NRHSNCVMYNIIGSDIDQYEQWLHCDSS 327 (354)
Q Consensus 294 lpl~~~----~~~~~~~m~nilg~~~~~~~~~~~~~~~ 327 (354)
-||+-. .....++-..|-.++ ...++...++.
T Consensus 319 ~~L~~~q~~i~~~GhAIe~Ri~AEd--p~~~f~Ps~G~ 354 (447)
T PRK05586 319 EKLSITQEDIKINGHAIECRINAED--PENGFMPCPGK 354 (447)
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCC--CCCCCCCCCCE
T ss_conf 9999770107878569999821457--88785058756
No 10
>PRK08462 biotin carboxylase; Validated
Probab=100.00 E-value=4.1e-36 Score=263.01 Aligned_cols=319 Identities=18% Similarity=0.204 Sum_probs=257.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCCCHHHCCCEEEEC-------CCCCHHHHHHHHH--HCCEEEE
Q ss_conf 887899980989899999999887978999967--6777134226827987-------8999999999974--1999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDP--DSNCPANQVSNQQIAA-------RHDDIKALNTFAD--ICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~--~~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~--~~Dvit~ 70 (354)
+-|||+|.+.|+.+.-.+.+|++||++++++.+ +.+++..+.||+.+.. +|.|.+++.+.++ .||+|-+
T Consensus 3 ~~kkvLIANRGEIA~Ri~ra~~elgi~tVavys~~D~~a~~v~~ad~~~~ig~~~~~~sYln~~~Ii~~a~~~~~dAihP 82 (446)
T PRK08462 3 ELKRILIANRGEIALRAIRTIQEMGKEAIAIYSTADKDALYLKYADAKICIGGAKSSESYLNIPAIISAAEIFEADAIFP 82 (446)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEC
T ss_conf 78889998960999999999998299699993767716762875989898289984334148999999999959198986
Q ss_pred C----CCCCCHHHHHHHHH-C-CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 7----72221133344430-2-0034876778763152788888765058867432--1000688886410013125540
Q gi|254780158|r 71 E----SENIPEKSISYLST-L-LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILK 142 (354)
Q Consensus 71 E----~E~i~~~~l~~l~~-~-~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlK 142 (354)
- .||-+. .+.+++ + .-+-|++++++...||...|+++.++|+|+.|+. .+++.+++.++++++|||++||
T Consensus 83 GyGfLSEn~~f--a~~~~~~Gi~fIGP~~~~i~~~GdK~~ar~~a~~~gvPvvpg~~~~v~~~~ea~~~a~~iGyPV~lK 160 (446)
T PRK08462 83 GYGFLSENQNF--VEICSHHSIKFIGPSVEVMALMSDKSKAKQVMKRAGVPVIPGSDGALKSYEEAKKIAKEIGYPVILK 160 (446)
T ss_pred CCHHHHHCHHH--HHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 82055408799--9999977998989599999984095989999998599806786787799999999999729956876
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHH--------HCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCC-CCC
Q ss_conf 2346755566454467467789875--------13555010111145644332010146654139970533-4543-555
Q gi|254780158|r 143 TRRLGYDGKGQKVYHENDCTQNLYA--------SLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHV-NGI 212 (354)
Q Consensus 143 p~~~GydGkG~~~i~~~~~l~~~~~--------~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~-~gi 212 (354)
+..|| .|||+.++++.++++.++. .+++.++++|+||...+++.|.+.+|..|++..+.--+ .+|+ ++.
T Consensus 161 as~GG-GGrGmriv~~~~el~~~~~~a~~ea~~~fg~~~v~vEk~i~~~rHIEvQvl~D~~Gn~ihl~eRdCSiQRr~QK 239 (446)
T PRK08462 161 AAAGG-GGRGMRVVEDESDLENLYLAAESEALSAFGDGTMYMEKFINNPRHIEVQILGDKHGNVIHVGERDCSMQRRHQK 239 (446)
T ss_pred ECCCC-CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCC
T ss_conf 32789-98742895767999999999987788605888669998503550789998852899888853212366346787
Q ss_pred EEEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC-EEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHH
Q ss_conf 058985278-787899999999886775402467753104553884-089994125704560462100135889999999
Q gi|254780158|r 213 LHKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDG-NVIANEMAPRVHNSGHWTEASCVISQFEQHIRS 290 (354)
Q Consensus 213 l~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg-~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~ra 290 (354)
+. -.+|+. +++++++++.++|.+++++++|.|+-+|||.+++++ ++||.||+||..=.=-+|-..+.++--+.++|.
T Consensus 240 vi-EeaPa~~l~~~~r~~m~~~A~~la~~vgY~gaGTvEFl~d~~~~~fyFlE~NtRlQVEH~VTE~vtGiDLV~~Qi~i 318 (446)
T PRK08462 240 LI-EESPAVVLDEKTRERLLETAIKAAKAIGYVGAGTFEFLLDSNMKDFYFMEMNTRLQVEHTVSEMVSGLDLIEWMIKI 318 (446)
T ss_pred EE-EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHH
T ss_conf 58-97899989989999988899999986483654338999807997189997433421001111221487799999998
Q ss_pred HHCCCCCCC---HHCCCEEEEEEECCCCCCHHHHHCCCCC
Q ss_conf 818899970---0048567999755770227889728996
Q gi|254780158|r 291 ITNLPLGNP---NRHSNCVMYNIIGSDIDQYEQWLHCDSS 327 (354)
Q Consensus 291 i~glpl~~~---~~~~~~~m~nilg~~~~~~~~~~~~~~~ 327 (354)
..|.+|.+. .+...++-..|-.++. .++...++.
T Consensus 319 A~G~~l~~q~~i~~~GhaIe~Ri~AEdp---~~F~Ps~G~ 355 (446)
T PRK08462 319 AEGEELPSQESIKLKGHAIECRITAEDP---KKFYPSPGK 355 (446)
T ss_pred HCCCCCCCCCCCCCCCEEEEEEEECCCC---CCCCCCCEE
T ss_conf 6799987566667264342234204587---767998758
No 11
>PRK08654 pyruvate carboxylase subunit A; Validated
Probab=100.00 E-value=1.8e-35 Score=258.61 Aligned_cols=317 Identities=17% Similarity=0.190 Sum_probs=256.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC--CCCCHHHCCCEEEEC-------CCCCHHHHHHHHH--HCCEEEEC-
Q ss_conf 78999809898999999998879789999676--777134226827987-------8999999999974--19999987-
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPD--SNCPANQVSNQQIAA-------RHDDIKALNTFAD--ICDYATYE- 71 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~--~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~--~~Dvit~E- 71 (354)
|||+|=--|+.|.-.+.+|++||++++++.++ .+++..++||+.+.. +|.|.+++.+.++ .||+|-+-
T Consensus 3 ~kvLIANRGEIA~RiiRa~relGi~tVaVyS~~D~~s~hv~~ADe~~~ig~~~~~~sYLni~~Ii~~A~~~g~dAIhPGY 82 (497)
T PRK08654 3 KKILIANRGEIAIRVMRACRELGIKTVAVYSEADKNALFVKYADEAYPIGPAPPSKSYLNMERILEVAKKAGAEAIHPGY 82 (497)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHCCCCHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEECCH
T ss_conf 60899878799999999999859939998883785489978889899848988321216899999999980999995777
Q ss_pred ---CCCCCHHHHHHHHH-CC-CCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf ---72221133344430-20-034876778763152788888765058867432--100068888641001312554023
Q gi|254780158|r 72 ---SENIPEKSISYLST-LL-PTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 72 ---~E~i~~~~l~~l~~-~~-~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
.||- +..+.+++ ++ -+-|++++++...||...|++++++|+|+.|+. .+++.+++.++++++|||+++|+.
T Consensus 83 GFLSEn~--~fA~~~~~~Gi~fIGP~~~~I~~~GDK~~ar~la~~~gVPvvPG~~~~v~~~~ea~~~A~~IGyPV~iKAs 160 (497)
T PRK08654 83 GFLSENP--KFAKACEKEGITFIGPSSNVIEAMGSKINAKKLMKKAGVPVLPGTEEGIEDIEEAKEVAEEIGYPVIIKAS 160 (497)
T ss_pred HHHHHCH--HHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
T ss_conf 6755489--99999998799999939999998658899999999809986899756679999999999864984587652
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHH--------HCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCC-CCEE
Q ss_conf 46755566454467467789875--------13555010111145644332010146654139970533-45435-5505
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYA--------SLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVN-GILH 214 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~--------~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~-gil~ 214 (354)
.|| +|||..++++.+|++.+++ .+++.++++|+|++.-|++.|.+.+|.+|++....-.+ .+|+. +.+.
T Consensus 161 ~GG-GGrGmriV~~~~eL~~~~~~a~~eA~~~fgd~~v~iEk~i~~~RHIEVQvl~D~~GnvihlgeRdCSiQRr~QKvI 239 (497)
T PRK08654 161 AGG-GGIGMRVVYNEEELEEAIESTQSIAQSAFGDSTVFIEKYLEKPRHIEIQVLADKHGNVIHLGDRECSIQRRHQKLI 239 (497)
T ss_pred CCC-CCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEECCEECCEEECCCCEE
T ss_conf 688-8886589960256899999999998874599845798841555378999998447978671460234362686369
Q ss_pred EEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHC
Q ss_conf 8985278-787899999999886775402467753104553884089994125704560462100135889999999818
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITN 293 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~g 293 (354)
-.+|+. +++++++++.+.|.+++++++|+|+-+|||.++ +|++||.||+||..=.--+|-..+.++--+.++|..+|
T Consensus 240 -EeaPap~l~~~~r~~m~~~Av~la~~vgY~gaGTVEFl~d-~g~fyFlEmNtRlQVEHpVTE~vTGiDLV~~Qi~iA~G 317 (497)
T PRK08654 240 -EEAPSPIMTPELRERMGEAAVKAAKAINYENAGTVEFLYS-NGNFYFLEMNTRLQVEHPITEMVTGIDIVKEQIKIAAG 317 (497)
T ss_pred -EECCCCCCCHHHHHHHHHHHHHHHHHHCEECCCEEEEEEE-CCEEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHCC
T ss_conf -9789998988999999999999888734302332799874-88399996124422455421666087199999998679
Q ss_pred CCCCC----CHHCCCEEEEEEECCCCCCHHHHHCCCCC
Q ss_conf 89997----00048567999755770227889728996
Q gi|254780158|r 294 LPLGN----PNRHSNCVMYNIIGSDIDQYEQWLHCDSS 327 (354)
Q Consensus 294 lpl~~----~~~~~~~~m~nilg~~~~~~~~~~~~~~~ 327 (354)
.||+. +.+...|+-..|-.++ ...++...++.
T Consensus 318 ~~L~~~q~~i~~~GhAIe~Ri~AEd--P~~~F~Ps~G~ 353 (497)
T PRK08654 318 EKLSFKQEDITIRGHAIECRINAED--PLNDFAPSPGK 353 (497)
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCC--CCCCCCCCCCE
T ss_conf 9889100377775139999810358--88786458736
No 12
>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated
Probab=100.00 E-value=5.6e-35 Score=255.39 Aligned_cols=317 Identities=17% Similarity=0.204 Sum_probs=255.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEE--CCCCCCHHHCCCEEEEC-------CCCCHHHHHHHHHH--CCEEEE--
Q ss_conf 789998098989999999988797899996--76777134226827987-------89999999999741--999998--
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILD--PDSNCPANQVSNQQIAA-------RHDDIKALNTFADI--CDYATY-- 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d--~~~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~~--~Dvit~-- 70 (354)
|||+|---|+.|.-.+.+|++||++++++. .+.+++..+.||+.+.. +|.|.+++.+.++. ||+|-+
T Consensus 3 ~kvLIANRGEIA~Ri~rt~~elgi~tvavys~~D~~a~hv~~Ade~v~ig~~~~~~sYln~~~Ii~~A~~~g~dAIHPGY 82 (449)
T PRK06111 3 QKVLIANRGEIAVRIIRTCQKLGIRTVAIYSEADEDALHVKLADEAYLIGGPRVQESYLNLEKIIEIAKKTGAEAIHPGY 82 (449)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEECCHHHCCCHHHHHCCEEEEECCCCHHHHHCCHHHHHHHHHHHCCCEEECCC
T ss_conf 61899878799999999999849979999173645683587498988808997454333999999999983999997798
Q ss_pred --CCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf --772221133344430--20034876778763152788888765058867432--100068888641001312554023
Q gi|254780158|r 71 --ESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 71 --E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
-.|| .+..+.+++ ..-+-|++++++...||...|+++.++|+|+.|.. .+++.+++.++++++|||+++|+.
T Consensus 83 GFLSEn--a~FA~~~~~~gi~fIGP~~~~i~~~GdK~~ar~~a~~~gvPvvPG~~~~~~~~~ea~~~a~~iGyPvliKAa 160 (449)
T PRK06111 83 GLLSEN--ASFAERCKEEGIVFIGPSAEIIAKMGSKIEARRAMQAAGVPVVPGITTALEDAEEAIAIARQIGYPVMLKAS 160 (449)
T ss_pred CCCCCC--HHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
T ss_conf 731169--899999998899899929999998648699999999839985578677789999999999865980266203
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHH--------HCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCCC-CEE
Q ss_conf 46755566454467467789875--------13555010111145644332010146654139970533-454355-505
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYA--------SLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVNG-ILH 214 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~--------~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~g-il~ 214 (354)
.|| .|||..++++.+++..+++ .+++..+++|+|++..|++.|.+.+|..|++..+.-.+ .+|+.+ .+.
T Consensus 161 ~GG-GGrGmriv~~~~el~~~~~~~~~eA~~~Fg~~~v~iEk~i~~~RHIEVQvl~D~~Gn~vhlgeRdCSiQRr~QKvi 239 (449)
T PRK06111 161 AGG-GGIGMQLVETEQELTKAFESNKKRAANFFGNGEMYLEKYIEDARHIEIQLLADTHGNTVYLWERECSVQRRHQKVI 239 (449)
T ss_pred CCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEE
T ss_conf 589-8672089579999999999999999986399602554413577337999997068888883051226635774169
Q ss_pred EEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHC
Q ss_conf 8985278-787899999999886775402467753104553884089994125704560462100135889999999818
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITN 293 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~g 293 (354)
+ .+|++ +++++++++.+.|.+++++++|.|+.+|||.+++++++||.||+||..=---+|...+.++--+.++|...|
T Consensus 240 E-eaPap~l~~~~r~~~~~~A~~la~~v~Y~g~gTvEFl~d~~~~fyFlEvNtRlQVEHpVTE~vtGiDLV~~Qi~iA~G 318 (449)
T PRK06111 240 E-EAPSPFLDEETRKAMGEAAVQAAKAIGYTNAGTIEFLVDNQKNFYFLEMNTRLQVEHPVTEEITGIDLVEQQLRIAAG 318 (449)
T ss_pred E-ECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCC
T ss_conf 9-789999999999999999999988717102468999994898689995343544466404555388489999998679
Q ss_pred CCCCCCH----HCCCEEEEEEECCCCCCHHHHHCCCCC
Q ss_conf 8999700----048567999755770227889728996
Q gi|254780158|r 294 LPLGNPN----RHSNCVMYNIIGSDIDQYEQWLHCDSS 327 (354)
Q Consensus 294 lpl~~~~----~~~~~~m~nilg~~~~~~~~~~~~~~~ 327 (354)
-||+-.+ ....|+-..|-.++. +.+...++.
T Consensus 319 ~~L~~~q~~i~~~GhAIe~Ri~AEdp---~~f~Ps~G~ 353 (449)
T PRK06111 319 EKLSFTQDDIKRSGHAIEVRIYAEDP---KTFFPSPGK 353 (449)
T ss_pred CCCCCCHHHCCCCCEEHHHHHHCCCC---CCCCCCCEE
T ss_conf 98998966668561205555513785---657899869
No 13
>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated
Probab=100.00 E-value=1.3e-34 Score=252.97 Aligned_cols=316 Identities=19% Similarity=0.218 Sum_probs=254.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCCCHHHCCCEEEEC-------CCCCHHHHHHHHHH--CCEEEE--
Q ss_conf 7899980989899999999887978999967--6777134226827987-------89999999999741--999998--
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDP--DSNCPANQVSNQQIAA-------RHDDIKALNTFADI--CDYATY-- 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~--~~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~~--~Dvit~-- 70 (354)
|||+|---|+.|.-.+.+|++||++++++.+ +.+++..+.||+.+.. +|.|.+++.+.++. ||+|-+
T Consensus 3 ~kvLIANRGEIA~RiiRt~~elgi~tVavys~~D~~a~hv~~ADeav~ig~~~~~~sYln~~~Ii~~A~~~g~dAihPGY 82 (449)
T PRK08591 3 DKILIANRGEIALRILRACKELGIKTVAVHSTADRDALHVQLADEAVCIGPAPSKKSYLNIPAIISAAEITGADAIHPGY 82 (449)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEECCHHHCCCCHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCC
T ss_conf 44889678499999999999849949998685752785288598889958988433304899999999982999897274
Q ss_pred --CCCCCCHHHHHHHHH-C-CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf --772221133344430-2-0034876778763152788888765058867432--100068888641001312554023
Q gi|254780158|r 71 --ESENIPEKSISYLST-L-LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 71 --E~E~i~~~~l~~l~~-~-~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
-.||-. ..+.+++ + .-+-|++++++...||...|+++.++|+|+.|+. .+++.+++.++++++|||+++|+.
T Consensus 83 GFLSEna~--FA~~~~~~Gi~fIGP~~~~i~~~GdK~~ar~~a~~agVPvvpgs~~~~~~~~ea~~~a~~iGyPv~iKA~ 160 (449)
T PRK08591 83 GFLSENAD--FAEICEDSGFTFIGPSAETIRLMGDKVTAKATMKKAGVPVVPGSDGPVDDEEEALAIAKEIGYPVIIKAT 160 (449)
T ss_pred CHHHCCHH--HHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
T ss_conf 24325899--9999998799999929999998769899999999839997888766556899999999874996698852
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHH--------CCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCCC-CEE
Q ss_conf 467555664544674677898751--------3555010111145644332010146654139970533-454355-505
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYAS--------LGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVNG-ILH 214 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~~--------~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~g-il~ 214 (354)
.|| .|||..++++.++++.+++. +++..+++|+|++..|++.|.+..|..|++..+---+ .+|+.+ .+.
T Consensus 161 ~GG-GGrGmrvv~~~~el~~~~~~~~~Ea~~aFg~~~v~iEk~i~~~RHIEVQilgD~~Gn~vhl~eRdCSiQRR~QKvI 239 (449)
T PRK08591 161 AGG-GGRGMRVVRTEAELEKAFSMARAEAKAAFGNPGVYMEKYLENPRHIEIQVLADGHGNAIHLGERDCSLQRRHQKVL 239 (449)
T ss_pred CCC-CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHCCCEEE
T ss_conf 689-8776999856789999999999999973799856787712565367899986389988987477567201461379
Q ss_pred EEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHC
Q ss_conf 8985278-787899999999886775402467753104553884089994125704560462100135889999999818
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITN 293 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~g 293 (354)
-.+|+. +++++++++.+.|.+++++++|.|+-+|||.++ +|++||.||+||..=---+|...+.++--+.++|...|
T Consensus 240 -EEaPap~l~~~~r~~m~~~A~~la~~v~Y~~aGTvEFL~d-~~~fyFlEmNtRlQVEHpVTE~vtGiDLV~~Qi~iA~G 317 (449)
T PRK08591 240 -EEAPSPAITEELRRKIGEAAVKAAKAIGYRGAGTIEFLYE-NGEFYFIEMNTRIQVEHPVTEMITGVDLVKEQIRIAAG 317 (449)
T ss_pred -EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE-CCEEEEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHCC
T ss_conf -9779987899999999999999999749642103899997-89089996243412456522665077199999998679
Q ss_pred CCCCC----CHHCCCEEEEEEECCCCCCHHHHHCCCCC
Q ss_conf 89997----00048567999755770227889728996
Q gi|254780158|r 294 LPLGN----PNRHSNCVMYNIIGSDIDQYEQWLHCDSS 327 (354)
Q Consensus 294 lpl~~----~~~~~~~~m~nilg~~~~~~~~~~~~~~~ 327 (354)
-||+- +.....++-..|-.++. ++++..++.
T Consensus 318 ~~L~~~q~~i~~~GhAIE~Ri~AEdP---~~f~Ps~G~ 352 (449)
T PRK08591 318 EPLSIKQEDIVFRGHAIECRINAEDP---KNFMPSPGK 352 (449)
T ss_pred CCCCCCCCCCCCCCCCHHEEECCCCC---CCCCCCCEE
T ss_conf 99997710067576112101013584---546788727
No 14
>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=250.56 Aligned_cols=318 Identities=16% Similarity=0.184 Sum_probs=254.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCCCHHHCCCEEEEC-------CCCCHHHHHHHHHH--CCEEEE-
Q ss_conf 87899980989899999999887978999967--6777134226827987-------89999999999741--999998-
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDP--DSNCPANQVSNQQIAA-------RHDDIKALNTFADI--CDYATY- 70 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~--~~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~~--~Dvit~- 70 (354)
-|||+|---|+.|.-.+.+|++||++++++.+ +.+++..++||+.+.. +|.|.+++.+.++. ||+|-+
T Consensus 5 ikkvLIANRGEIA~Riirt~relgi~tVavys~~D~~~~hv~~ADeav~ig~~~~~~sYln~~~Ii~~A~~~g~dAiHPG 84 (458)
T PRK12833 5 IRTVLVANRGEIAVRVIRAAHELGMRAVAVVSDADRDSLAARMADEAVHIGPSHAAKSYLNPAAILAAARQCGADAIHPG 84 (458)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECC
T ss_conf 87899977869999999999983998999918576558358749999982898700132699999999998299999768
Q ss_pred ---CCCCCCHHHHHHHHHC--CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf ---7722211333444302--0034876778763152788888765058867432--10006888864100131255402
Q gi|254780158|r 71 ---ESENIPEKSISYLSTL--LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKT 143 (354)
Q Consensus 71 ---E~E~i~~~~l~~l~~~--~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp 143 (354)
-.|| .+..+.+++. .-+-|++++++...||...|+++.++|+|+.|+. .+.+.+++.++++++|||+++|+
T Consensus 85 YGFLSEn--a~FA~~~~~~gi~fIGPs~~~i~~~GdK~~ar~~a~~~gvPvvpgs~~~v~~~~ea~~~a~~iGyPv~iKA 162 (458)
T PRK12833 85 YGFLSEN--AAFAAQVEAAGLIFVGPDAQVIATMGDKARARETARRAGVPTVPGSDGVVASLDAALEVAARIGYPVMIKA 162 (458)
T ss_pred CCHHHHC--HHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH
T ss_conf 6625529--99999999789989994999999850969999999984999668966766779999999986597542133
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCC-CEE
Q ss_conf 34675556645446746778987--------513555010111145644332010146654139970533454355-505
Q gi|254780158|r 144 RRLGYDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNG-ILH 214 (354)
Q Consensus 144 ~~~GydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~g-il~ 214 (354)
..|| .|||+.++++.++++.++ ..+++..+++|+||+..|++.|.+.+|.++.+.++.---.+|+.+ .+.
T Consensus 163 s~GG-GGrGmriv~~~~el~~~~~~a~~ea~~~Fg~~~v~iEk~i~~~RHIEVQvl~D~~~~vhl~eRdCSiQRr~QKvi 241 (458)
T PRK12833 163 AAGG-GGRGIRVAHDAAQLAAELPLAQREAQAAFGDGGVYLERFIARARHIEVQILGDGENVVHLFERECSLQRRRQKIL 241 (458)
T ss_pred CCCC-CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCEE
T ss_conf 2589-987107952641148999999999997269976478761367507999998547876998502565656777558
Q ss_pred EEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHH
Q ss_conf 8985278-7878999999998867754024677531045538-8408999412570456046210013588999999981
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTN-DGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSIT 292 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~-dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~ 292 (354)
-.+|+. +++++++++.+.|.+++++++|.|+-+|||.++. +|++||.||+||..=---+|.....++--+.++|...
T Consensus 242 -EeaPsp~l~~~~r~~l~~~a~~la~~v~y~gagTvEFl~d~~~~~fyFlEvNtRlQVEH~VTE~vtGiDLV~~Qi~iA~ 320 (458)
T PRK12833 242 -EEAPSPSLTPAQRDALCASATRLARAVGYRGAGTLEYLFDDARGEFYFIEMNTRIQVEHPVTEAITGIDLVREMLRIAD 320 (458)
T ss_pred -EECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEHHHCCCCHHHHHHHHHC
T ss_conf -8779997899999999889999988533100002666786588968999621364444421223318859999999977
Q ss_pred CCCCCC----CHHCCCEEEEEEECCCCCCHHHHHCCCC
Q ss_conf 889997----0004856799975577022788972899
Q gi|254780158|r 293 NLPLGN----PNRHSNCVMYNIIGSDIDQYEQWLHCDS 326 (354)
Q Consensus 293 glpl~~----~~~~~~~~m~nilg~~~~~~~~~~~~~~ 326 (354)
|-||+- +.....++-..|-.++ ..+++...++
T Consensus 321 G~~L~~~q~~i~~~GhaIe~RI~AEd--p~~~f~Ps~G 356 (458)
T PRK12833 321 GEPLRFAQGDIALRGAALECRINAED--PLQDFRPNPG 356 (458)
T ss_pred CCCCCCCHHCCCCCCEEEEEEEECCC--CCCCCCCCCE
T ss_conf 99778642106667508999752258--8778676883
No 15
>PRK12999 pyruvate carboxylase; Reviewed
Probab=100.00 E-value=1.1e-33 Score=246.71 Aligned_cols=327 Identities=18% Similarity=0.207 Sum_probs=261.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCCCHHHCCCEEEEC--------CCCCHHHHHHHHHH--CCEEEE
Q ss_conf 87899980989899999999887978999967--6777134226827987--------89999999999741--999998
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDP--DSNCPANQVSNQQIAA--------RHDDIKALNTFADI--CDYATY 70 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~--~~~~pa~~~ad~~~~~--------~~~D~~~l~~~~~~--~Dvit~ 70 (354)
-|||+|=--|+.|.-.+.+|++||++++++.+ +.+++....||+.+.. +|.|.+.+.+.++. ||+|-+
T Consensus 5 ~~kvLiANRGEIA~Ri~Ra~~elgi~tVavys~~D~~s~h~~~ADea~~ig~~~~p~~sYL~~~~ii~~A~~~~~dAiHP 84 (1147)
T PRK12999 5 IKKVLVANRGEIAIRIFRAATELGIRTVAIYSEEDKLSLHRFKADEAYLIGEGKGPIEAYLDIDEIIRVAKQAGVDAIHP 84 (1147)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHCCEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCEEEC
T ss_conf 87899966819999999999983995899978464578258858856772899971311129999999999949899977
Q ss_pred ----CCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEE
Q ss_conf ----772221133344430--20034876778763152788888765058867432--1000688886410013125540
Q gi|254780158|r 71 ----ESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILK 142 (354)
Q Consensus 71 ----E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlK 142 (354)
-.||- +..+.+++ .+-+-|++++++...||...|+++.++|+|+.|.. .+.+.+++.++++++|||+++|
T Consensus 85 GYGFLSEn~--~Fa~~~~~~gi~fIGP~~~~i~~~GdK~~ar~~a~~~gvPvvpgs~~~~~~~~~~~~~a~~iGyPv~iK 162 (1147)
T PRK12999 85 GYGFLSENP--EFARACAEAGITFIGPTAEVLRLLGDKVAARNAAIKAGVPVIPGTEGPIDDLEEALEFAEEIGYPLMLK 162 (1147)
T ss_pred CCCHHHCCH--HHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 962200799--999999987899989499999985599999999998398988898998899999999998719978999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHH--------CCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCCCCE
Q ss_conf 23467555664544674677898751--------3555010111145644332010146654139970533-45435550
Q gi|254780158|r 143 TRRLGYDGKGQKVYHENDCTQNLYAS--------LGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVNGIL 213 (354)
Q Consensus 143 p~~~GydGkG~~~i~~~~~l~~~~~~--------~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~gil 213 (354)
+..|| .|||..++++.++++.+++. +++..+++|+||+..|.+.|.+..|..|++..+---+ .+|+.+.-
T Consensus 163 A~~GG-GGrGmrvv~~~~~l~~~~~~a~~EA~~aFG~~~v~~Ek~i~~~rHiEvQilgD~~Gnvvhl~eRdCSiQRR~QK 241 (1147)
T PRK12999 163 ASAGG-GGRGMRIVRSEEELEEAFERAKREAKAAFGNDEVYLEKYVENPRHIEVQILGDKHGNVVHLYERDCSVQRRHQK 241 (1147)
T ss_pred ECCCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCHHHCCCE
T ss_conf 77789-80514895898999999999999999836997568855036786479999962889888714765643223513
Q ss_pred EEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHH
Q ss_conf 58985278-78789999999988677540246775310455388408999412570456046210013588999999981
Q gi|254780158|r 214 HKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSIT 292 (354)
Q Consensus 214 ~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~ 292 (354)
.--.+||. +++++++++.+.|.+++++++|.|.-+|||.+++||+.||.||+||..=---+|.+-+.++--+.++|...
T Consensus 242 viEeaPap~l~~~~r~~l~~~A~~~a~~v~Y~~aGTvEFL~d~~~~fyFiE~N~RlQVEH~VTE~vtGiDlV~~Qi~iA~ 321 (1147)
T PRK12999 242 VVEIAPAPGLSPELREEICEAAVKLARAVGYVNAGTVEFLVDADGNFYFIEVNPRIQVEHTVTEMVTGIDIVQSQILIAE 321 (1147)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHEECCCHHHHHHHHHC
T ss_conf 57866899999999999999999999976976432278998388878999866565645653021015508999999857
Q ss_pred CCCCCCCH----------HCCCEEEEEEECCCCCCHHHHHCCCCCEEEECCCC
Q ss_conf 88999700----------04856799975577022788972899689970887
Q gi|254780158|r 293 NLPLGNPN----------RHSNCVMYNIIGSDIDQYEQWLHCDSSVIHIYGKS 335 (354)
Q Consensus 293 glpl~~~~----------~~~~~~m~nilg~~~~~~~~~~~~~~~~~~~YgK~ 335 (354)
|.+|.... ....|+-..|-.++ ...+++..++ .+..|.-+
T Consensus 322 G~~L~~~~~~~~~Q~~i~~~G~Aie~Ri~aEd--p~~~F~P~~G-~i~~~~~p 371 (1147)
T PRK12999 322 GATLGDLEVGIPSQEDIRLRGHAIQCRITTED--PANNFMPDTG-RITAYRSP 371 (1147)
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC--CCCCCCCCCC-EEEEEECC
T ss_conf 99756676787754467766489999986117--7525678877-40378469
No 16
>PRK07178 acetyl-CoA carboxylase; Validated
Probab=100.00 E-value=8.4e-34 Score=247.45 Aligned_cols=317 Identities=17% Similarity=0.194 Sum_probs=255.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCCCHHHCCCEEEEC------CCCCHHHHHHHHHH--CCEEEE---
Q ss_conf 7899980989899999999887978999967--6777134226827987------89999999999741--999998---
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDP--DSNCPANQVSNQQIAA------RHDDIKALNTFADI--CDYATY--- 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~--~~~~pa~~~ad~~~~~------~~~D~~~l~~~~~~--~Dvit~--- 70 (354)
|||+|=--|+.|.-.+.+|++||++++++.+ +.+++..+.||+.+.. +|.|.+++.+.++. ||+|-+
T Consensus 3 ~kvLIANRGEIA~RiiRt~~elgi~tVavys~~D~~a~hv~~ADea~~ig~~~~~sYln~~~Ii~~A~~~g~dAiHPGYG 82 (471)
T PRK07178 3 KKILIANRGEIAVRIVRACAEMGIRSVAIYSEADRHALHVKRADEAHSIGADPLAGYLNPRKLVNLAVETGCDALHPGYG 82 (471)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHCCEEEECCCCHHHHHCCHHHHHHHHHHHCCCEEECCCC
T ss_conf 60899778699999999999839948999083756683688488888718872665449999999999969999977833
Q ss_pred -CCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf -772221133344430--20034876778763152788888765058867432--1000688886410013125540234
Q gi|254780158|r 71 -ESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTRR 145 (354)
Q Consensus 71 -E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~~ 145 (354)
-.||- +..+.+++ ..-+.|++++++...||...|+++.++|+|+.|+. .+++.+++.++.+++|||+++|+..
T Consensus 83 FLSEn~--~FA~~~~~~gi~FIGPs~~~i~~~GdK~~ar~~a~~~gvPv~pgs~~~v~~~eea~~~A~~iGyPV~lKAa~ 160 (471)
T PRK07178 83 FLSENA--ELAEICAERGIKFIGPSADVIRRMGDKTEARRSMIKAGVPVTPGSEGNLADIDEALAEAERIGYPVMLKATS 160 (471)
T ss_pred HHHCCH--HHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
T ss_conf 311598--999999978998999599999987483989999998699826896886566999999998669815863202
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHH--------CCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCC-CCEEE
Q ss_conf 67555664544674677898751--------3555010111145644332010146654139970533-45435-55058
Q gi|254780158|r 146 LGYDGKGQKVYHENDCTQNLYAS--------LGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVN-GILHK 215 (354)
Q Consensus 146 ~GydGkG~~~i~~~~~l~~~~~~--------~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~-gil~~ 215 (354)
|| .|||..++++.+++++++.. +++.++++|+|++..|++.|.+.+|..|++..+.--+ .+|+. +.+.+
T Consensus 161 GG-GGrGmrvv~~~~el~~~~~~~~~EA~~aFg~~~v~lEk~i~~~RHIEVQilgD~~Gnvihl~eRdCSiQRr~QKvIE 239 (471)
T PRK07178 161 GG-GGRGIRRCNSREELEQNFPRVISEATKAFGSAEVFLEKCIVNPKHIEVQILADSFGNVVHLFERDCSIQRRNQKLIE 239 (471)
T ss_pred CC-CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEE
T ss_conf 68-76644997660568899999999999844997368766046762899999980789888884123465107873278
Q ss_pred EEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCC
Q ss_conf 985278-7878999999998867754024677531045538840899941257045604621001358899999998188
Q gi|254780158|r 216 SIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNL 294 (354)
Q Consensus 216 s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~gl 294 (354)
.+|+. +++++++++.+.+.+++++++|.|+-+|||.+ .+|++||.||+||..=---+|...+.++--++++|...|.
T Consensus 240 -eaPa~~l~~~~r~~l~~~A~~la~~v~Y~gaGTvEFlv-~~~~~yFlEvNtRlQVEH~VTE~vtGiDLV~~Qi~iA~G~ 317 (471)
T PRK07178 240 -IAPSPQLTPEQRAYIGDLAVRAAKAVGYENAGTVEFLL-ADGEVYFMEMNTRVQVEHTITEEITGIDIVREQIRIASGL 317 (471)
T ss_pred -ECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE-ECCCEEEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHCCC
T ss_conf -76999888999999988999999964865012699998-6794799832466655542136661675899999986799
Q ss_pred CCCC----CHHCCCEEEEEEECCCCCCHHHHHCCCCC
Q ss_conf 9997----00048567999755770227889728996
Q gi|254780158|r 295 PLGN----PNRHSNCVMYNIIGSDIDQYEQWLHCDSS 327 (354)
Q Consensus 295 pl~~----~~~~~~~~m~nilg~~~~~~~~~~~~~~~ 327 (354)
||+- +.....++-..|-.++. ..+++..++.
T Consensus 318 ~L~~~q~~i~~~GhAIe~Ri~AEDp--~~~F~Ps~G~ 352 (471)
T PRK07178 318 PLSVKQEDIQHRGFALQFRINAEDP--KNNFLPSFGK 352 (471)
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCC--CCCCCCCCCE
T ss_conf 7883102445588589999851377--6686568725
No 17
>PRK08463 acetyl-CoA carboxylase; Validated
Probab=100.00 E-value=3.5e-33 Score=243.24 Aligned_cols=322 Identities=18% Similarity=0.201 Sum_probs=258.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEE--CCCCCCHHHCCCEEEEC------CCCCHHHHHHHHHH--CCEEEE---
Q ss_conf 789998098989999999988797899996--76777134226827987------89999999999741--999998---
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILD--PDSNCPANQVSNQQIAA------RHDDIKALNTFADI--CDYATY--- 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d--~~~~~pa~~~ad~~~~~------~~~D~~~l~~~~~~--~Dvit~--- 70 (354)
|||+|=--|+.|.-.+.+|++||++++++. .+.+++..+.||+.+.. +|.|.+++.+.++. ||+|-+
T Consensus 3 ~kvLIANRGEIA~Riirt~relgi~tVavys~~D~~s~hv~~Adea~~lg~~~~~sYLn~~~Ii~~A~~~gadAiHPGYG 82 (478)
T PRK08463 3 HKILIANRGEIAVRIIRACRDLHIKSVAIYTEPDRECLHVKIADEAYRIGTDPIKGYLDVKRIVEIAKACGADAIHPGYG 82 (478)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHCCCCHHHHCCEEEECCCCHHHHHCCHHHHHHHHHHHCCCEEECCCC
T ss_conf 61789668699999999999839978999785765783477578766528873453069999999999849999936876
Q ss_pred -CCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCC---CCHHHHHHHHHHCCCCEEEEECC
Q ss_conf -772221133344430--200348767787631527888887650588674321---00068888641001312554023
Q gi|254780158|r 71 -ESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYE---INSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 71 -E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~---v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
-.||- +..+.+++ ..-+-|++++++...||...|+++.++|+|+.|... .++.+++.++.+++|||+++|+.
T Consensus 83 FLSEna--~FA~~~~~~Gi~FIGPs~~~i~~~GdK~~Ar~~a~~~gVPvvpg~~~~~~~~~~~~~~~a~~iGyPv~lKA~ 160 (478)
T PRK08463 83 FLSENY--EFAKAVEDAGLIFIGPKSEVIRKMGNKNIARKLMAKNGIPIVPGTEKLNSESMEEIKIFARKIGYPVILKAS 160 (478)
T ss_pred CCCCCH--HHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
T ss_conf 234699--999999978998999499999998648999999998399846676778876799999999865980478403
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHH--------CCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCC-CCEE
Q ss_conf 467555664544674677898751--------3555010111145644332010146654139970533-45435-5505
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYAS--------LGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVN-GILH 214 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~~--------~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~-gil~ 214 (354)
.|| .|||+.++++.++++.+++. +++..+++|+||+..|++.|.+..|..|++..+.--+ .+|+. +.+.
T Consensus 161 ~GG-GGrGmrvv~~~~el~~~~~~a~~ea~~~Fg~~~v~iEk~i~~~RHiEVQvlgD~~Gnvi~l~eRdCSiQRr~QKvi 239 (478)
T PRK08463 161 GGG-GGRGIRVVWKEEDLENAFESCKREAKAYFNNDEVFMEKYVVNPRHIEFQILGDNYGNIIHLCERDCSIQRRHQKVI 239 (478)
T ss_pred CCC-CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEE
T ss_conf 599-9871178557899999999999999984699854788750245178999986179978896305134334675168
Q ss_pred EEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHC
Q ss_conf 8985278-787899999999886775402467753104553884089994125704560462100135889999999818
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITN 293 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~g 293 (354)
+ .+|+. +++++++++.+.+.+++++++|.|+-+|||.++.+|++||.||+||..=---+|...+.++--+.++|...|
T Consensus 240 E-eaPap~l~~~~r~~m~~~A~~la~~v~Y~~aGTvEFL~d~~~~fyFlEmNtRlQVEHpVTE~vTGvDLV~~Qi~iA~G 318 (478)
T PRK08463 240 E-IAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTIEFLLDDYNNFYFMEMNTRIQVEHGVTEEITGIDLIVRQIRIAAG 318 (478)
T ss_pred E-ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEECCCCHHHHHHHHHCC
T ss_conf 9-669998788999999889987666305166533898883899789996075545566541100388689999998679
Q ss_pred CCCCCCH----HCCCEEEEEEECCCCCCHHHHHCCCCCEEEE
Q ss_conf 8999700----0485679997557702278897289968997
Q gi|254780158|r 294 LPLGNPN----RHSNCVMYNIIGSDIDQYEQWLHCDSSVIHI 331 (354)
Q Consensus 294 lpl~~~~----~~~~~~m~nilg~~~~~~~~~~~~~~~~~~~ 331 (354)
-||+-.+ ....++-..|-.++ ..++++..++.--+|
T Consensus 319 ~~L~~~q~~i~~~GhAIE~RI~AEd--p~~~F~Ps~G~i~~~ 358 (478)
T PRK08463 319 EILDLEQSDIKPRGFAIEARITAEN--VWKNFIPSPGKITGY 358 (478)
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCC--CCCCCCCCCEEEEEE
T ss_conf 9888540034667459999985147--766746587488789
No 18
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=245.44 Aligned_cols=290 Identities=19% Similarity=0.175 Sum_probs=220.1
Q ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCHHHCCCEEEECCC-CCH---HHHHHHH--HHCCEEEECCCC-C
Q ss_conf 899980989899999999887--978999967677713422682798789-999---9999997--419999987722-2
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARL--GFCTVILDPDSNCPANQVSNQQIAARH-DDI---KALNTFA--DICDYATYESEN-I 75 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~l--G~~v~v~d~~~~~pa~~~ad~~~~~~~-~D~---~~l~~~~--~~~Dvit~E~E~-i 75 (354)
+|+|.|+|. +..++.+.++. |++|+..|.++.+|+..+||+++..+. +|. +.+.+++ +++|+|.+.++. +
T Consensus 3 nILvt~~G~-~~~ii~~lk~~~~~~~Vi~~D~~~~a~~~~~aD~~y~~P~~~d~~y~~~ll~i~~~~~id~iiP~~d~El 81 (325)
T PRK12767 3 NILVTSAGR-RVQLVKALKKSLLGGKVIGADISPLAPALYFADKFYVVPKVTDPNYIDALLDICKKENIDALIPLIDPEL 81 (325)
T ss_pred EEEEECCCC-HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHH
T ss_conf 899986786-8999999997699859999689989953445488998788898789999999999879999997785026
Q ss_pred CH--HHHHHHHH-CCCC-CCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH-HHHCCCCEEEEECCCCCCCC
Q ss_conf 11--33344430-2003-48767787631527888887650588674321000688886-41001312554023467555
Q gi|254780158|r 76 PE--KSISYLST-LLPT-YPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTN-ILGGFKGKGILKTRRLGYDG 150 (354)
Q Consensus 76 ~~--~~l~~l~~-~~~v-~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~-~~~~~g~P~vlKp~~~GydG 150 (354)
.. ...+.+++ ++.+ .|++++++++.||..++++++++|+|+|+++.+.+.+++.+ ..+.++||+|+||+. |++|
T Consensus 82 ~~la~~~~~l~~~gi~v~~~~~e~i~~~~DK~~~~~~l~~~gip~P~t~~~~~~~~~~~~~~~~~~fP~vvKP~~-g~gs 160 (325)
T PRK12767 82 PLLAQHRDEFKEIGVKVLVSSKEVIEICNDKWLTYEFLKENGINTPKSYLPEDLEDLLKALAEELGFPLIVKPRD-GSGS 160 (325)
T ss_pred HHHHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECC-CCCC
T ss_conf 689999999996799895697999998549999999999759998982055899999999986569966985356-7887
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCC-CCCCCEEEEEECCCCCHHHHHH
Q ss_conf 664544674677898751355501011114564433201014665413997053345-4355505898527878789999
Q gi|254780158|r 151 KGQKVYHENDCTQNLYASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNT-HVNGILHKSIVPASISQKTSLL 229 (354)
Q Consensus 151 kG~~~i~~~~~l~~~~~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~-~~~gil~~s~~Pa~i~~~~~~~ 229 (354)
+|++++++.+|++.++... .++++|||++ +.|+++.+.++.+|++...-+.+.. ..+|. +.....+. ..+
T Consensus 161 ~Gv~~i~~~~el~~~~~~~--~~~ivqe~i~-G~E~tvdv~~d~~g~~~~~~~~~r~~~~~G~---~~~~~~~~---~~~ 231 (325)
T PRK12767 161 IGVFKVNNREELEFLLRYN--PNLIIQEFIE-GQEYTVDVLCDLNGEVISIVPRKRIEVRAGE---TSKGVTVK---NPE 231 (325)
T ss_pred CCEEEECCHHHHHHHHHHC--CCEEEEECCC-CCEEEEEEEEECCCCEEEEEEEEECCCCCCC---CCCCEECC---HHH
T ss_conf 7549979999999999748--9749870348-9889999999789999999998733644578---67753057---999
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCC-CCCCHHCCC-EEE
Q ss_conf 999988677540246775310455388408999412570456046210013588999999981889-997000485-679
Q gi|254780158|r 230 AHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLP-LGNPNRHSN-CVM 307 (354)
Q Consensus 230 a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glp-l~~~~~~~~-~~m 307 (354)
+.+++++++++|++.|.+.|||+++ ||+.|+.||+||..-+--++ -.+..+..+.++|.++|-. ++.+....+ ..|
T Consensus 232 l~~~~~~i~~~l~~~G~~~vq~~~~-~g~~~iiEiNPRf~g~~~l~-~~aG~n~p~~~~~~~lg~~~~~~~~~~~~g~~~ 309 (325)
T PRK12767 232 LFKLAERIAEKLGARGPLNIQCFVV-DGEPYLFEINPRFGGGYPLR-AMAGFNEPDILIRNLLGGENIPIIGEYKEGLYM 309 (325)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEEE-CCEEEEEEEECCCCCCHHHH-HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEE
T ss_conf 9999999999819854599999998-99699999978878646739-883989999999998499989875543578289
No 19
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit; InterPro: IPR006275 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates , . CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate . The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain . CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites . The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein . The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP . There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia . CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains . This entry represents glutamine-dependent CPSase (6.3.5.5 from EC) from prokaryotes and eukaryotes (CPSase II). ; GO: 0004086 carbamoyl-phosphate synthase activity, 0006807 nitrogen compound metabolic process.
Probab=100.00 E-value=2.9e-34 Score=250.52 Aligned_cols=293 Identities=15% Similarity=0.230 Sum_probs=245.1
Q ss_pred CCEEEEECCC-----HH------HHHHHHHHHHCCCEEEEEECCCCCCHHHC--CCEEEECCCCCHHHHHHHH--HHCCE
Q ss_conf 8789998098-----98------99999999887978999967677713422--6827987899999999997--41999
Q gi|254780158|r 3 KKTIGIIGGG-----QL------ARMLSMSAARLGFCTVILDPDSNCPANQV--SNQQIAARHDDIKALNTFA--DICDY 67 (354)
Q Consensus 3 ~k~IgIlG~G-----qL------~rml~~aA~~lG~~v~v~d~~~~~pa~~~--ad~~~~~~~~D~~~l~~~~--~~~Dv 67 (354)
||+|+||||| |- +.-.+.|.|++||+++++..||......+ ||+-|.-+.+ .|.+..+. ++|+-
T Consensus 573 Kk~~lvlGSGp~RIGqgvEFDYc~Vh~~~aLr~~Gye~ImiN~NPETVSTDyD~sDrLYFEplt-~E~Vm~I~e~E~~~G 651 (1089)
T TIGR01369 573 KKKVLVLGSGPNRIGQGVEFDYCCVHAVLALREAGYETIMINYNPETVSTDYDTSDRLYFEPLT-FEDVMNIIELEKPEG 651 (1089)
T ss_pred CCEEEEECCCCEECCCCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCCCCC-CCCCEEHEEECCCCE
T ss_conf 8568998784514066312056789999999872995999977899743666651011587635-031001100058667
Q ss_pred EEECC-CCCCHHHHHHHH-HC-CCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 99877-222113334443-02-0034-87677876315278888876505886743210006888864100131255402
Q gi|254780158|r 68 ATYES-ENIPEKSISYLS-TL-LPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKT 143 (354)
Q Consensus 68 it~E~-E~i~~~~l~~l~-~~-~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp 143 (354)
|+..| .++|......|+ .+ +++. -|++++..+-||.++-++|+++|||.|+|..++|.+|+.+++..+|||+++.|
T Consensus 652 VIVq~GGQtp~nlA~~L~~~GG~~iLGTS~~~ID~AEDR~kFs~~l~~Lgi~QP~~~~a~s~eea~~~A~~iGYPvlvRP 731 (1089)
T TIGR01369 652 VIVQFGGQTPLNLAKELEEAGGVPILGTSPESIDRAEDREKFSELLDELGIPQPEWKIATSVEEAKEFASEIGYPVLVRP 731 (1089)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCEEECC
T ss_conf 99974873267899999970893173688578751318679999997158798988527287999999854699289816
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHHHC----CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCC----CCCEE
Q ss_conf 34-675556645446746778987513----5550101111456443320101466541399705334543----55505
Q gi|254780158|r 144 RR-LGYDGKGQKVYHENDCTQNLYASL----GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHV----NGILH 214 (354)
Q Consensus 144 ~~-~GydGkG~~~i~~~~~l~~~~~~~----~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~----~gil~ 214 (354)
+- . +|++..++.+.++|...+... ...|++|-+|++...|+-|.++.| .+++.++-+.||+-+ +|+-.
T Consensus 732 SYVL--gG~aM~iv~~~eeL~~yl~~a~~~S~~~PVlidky~e~A~E~dVD~v~D-g~~v~i~gI~EHiE~AGVHSGDs~ 808 (1089)
T TIGR01369 732 SYVL--GGRAMEIVYNEEELARYLEEAVEVSPEHPVLIDKYLEDAVEIDVDAVSD-GEEVLIPGIMEHIEEAGVHSGDST 808 (1089)
T ss_pred CCCC--CCCCHHEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEE-CCEEEEEEHHHHHHHCCCCCCCHH
T ss_conf 8300--3362100267889999999999720899769888528888999989972-884899623123421367613053
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC-CEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHC
Q ss_conf 898527878789999999988677540246775310455388-4089994125704560462100135889999999818
Q gi|254780158|r 215 KSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTND-GNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITN 293 (354)
Q Consensus 215 ~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~d-g~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~g 293 (354)
.++-|..+++++.+++++++.+|+++|+++|+|.|+|-++ | |++||.|++||-.-|==+-==+..++-=..-+|+++|
T Consensus 809 ~~~Pp~~L~~~~~~~i~~~~~~iA~~L~v~Gl~NiQf~~~-~E~~~yVIE~NpRASRtVPFvSKa~Gipl~~~A~~~~~G 887 (1089)
T TIGR01369 809 CVLPPQTLSEDIVKRIKDIVRKIAKELNVKGLFNIQFVVK-DEGEVYVIEVNPRASRTVPFVSKATGIPLAKLAVRVMLG 887 (1089)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE-CCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHC
T ss_conf 1176977788999999999999998706607222455561-699679999717420665413210378879999999708
Q ss_pred CCCCCCH
Q ss_conf 8999700
Q gi|254780158|r 294 LPLGNPN 300 (354)
Q Consensus 294 lpl~~~~ 300 (354)
..|-+..
T Consensus 888 ~~l~~~~ 894 (1089)
T TIGR01369 888 KKLEELG 894 (1089)
T ss_pred CCCHHCC
T ss_conf 8201027
No 20
>COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]
Probab=100.00 E-value=8e-33 Score=240.85 Aligned_cols=333 Identities=22% Similarity=0.246 Sum_probs=266.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE--ECCCCCCHHHCCCEEEEC-------CCCCHHHHHHHHHHC--CEEE---
Q ss_conf 78999809898999999998879789999--676777134226827987-------899999999997419--9999---
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVIL--DPDSNCPANQVSNQQIAA-------RHDDIKALNTFADIC--DYAT--- 69 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~--d~~~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~~~--Dvit--- 69 (354)
+||+|=--|+.++-.+.+|++||+.++++ |++.+++..++||+.+.+ ||.|.+++.+-+++. |+|-
T Consensus 3 ~KiLIANRGEIAcRVIRtar~lGi~tVAVYSdaDa~A~hV~~ADEAv~iGpapaaeSYL~~dkIi~Aa~~tGA~AIHPGY 82 (645)
T COG4770 3 SKILIANRGEIACRVIRTARDLGIRTVAVYSDADADALHVRMADEAVHIGPAPAAESYLDIDKIIDAARRTGAQAIHPGY 82 (645)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCHHHHCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 24887246434689999999809956999725777852666412244317996012122688999999973832136884
Q ss_pred -ECCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf -8772221133344430--20034876778763152788888765058867432--100068888641001312554023
Q gi|254780158|r 70 -YESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 70 -~E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
|-.||- +..+.+++ .+-+-|++++++...||...|.++.+.|+|+.|-+ .+.+.+++.++.+++|||+++|++
T Consensus 83 GFLSENa--~FA~a~~~aGlvfIGP~~~aI~aMGdK~~AK~l~~~AgVp~VPG~~g~~qd~~~~~~~A~eiGyPVlIKAs 160 (645)
T COG4770 83 GFLSENA--DFAQAVEDAGLVFIGPSAGAIRAMGDKIAAKKLAAEAGVPTVPGYHGPIQDAAELVAIAEEIGYPVLIKAS 160 (645)
T ss_pred CCCCCCH--HHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
T ss_conf 2123598--99999997791897889799998446799999999749980689787445899999999863985899963
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHH--------HCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCCCCEEE
Q ss_conf 46755566454467467789875--------13555010111145644332010146654139970533-4543555058
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYA--------SLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVNGILHK 215 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~--------~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~gil~~ 215 (354)
-|| .|||..++.+.+++.++++ .+++..+++|+|++--|.|.+.|.-|.+|++++.---+ .+|+.+.-.-
T Consensus 161 aGG-GGKGMRvv~~~~e~~e~l~sarrEA~asFGddrv~iEkyl~~PRHIEiQV~aD~HGNvv~LgERdCSlQRRhQKVI 239 (645)
T COG4770 161 AGG-GGKGMRVVETPEEFAEALESARREAKASFGDDRVFIEKYLDKPRHIEIQVFADQHGNVVHLGERDCSLQRRHQKVI 239 (645)
T ss_pred CCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCHHHHCCHHH
T ss_conf 689-9775376268899999999999998850488647624551787448999986277878886325332423112232
Q ss_pred EEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCC
Q ss_conf 985278-7878999999998867754024677531045538840899941257045604621001358899999998188
Q gi|254780158|r 216 SIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNL 294 (354)
Q Consensus 216 s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~gl 294 (354)
--+|++ +++++++.+.+.|.+++++.||+|.-+|||.++.|+.+||.||+.|..=---+|.....++--|+++|...|-
T Consensus 240 EEAPaP~l~~~~R~amg~aAv~~a~avgY~gAGTVEFivd~~~~f~FlEMNTRLQVEHPVTE~iTGiDLVewqiRVA~Ge 319 (645)
T COG4770 240 EEAPAPFLTEETREAMGEAAVAAAKAVGYVGAGTVEFIVDADGNFYFLEMNTRLQVEHPVTELITGIDLVEWQIRVASGE 319 (645)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 00899999999999999999999986297757558999838986899986220202564122420138999999974388
Q ss_pred CCCCC----HHCCCEEEEEEECCCCCCHHHHHCCCCCEEEECCCCCCCCCCEE
Q ss_conf 99970----00485679997557702278897289968997088768979742
Q gi|254780158|r 295 PLGNP----NRHSNCVMYNIIGSDIDQYEQWLHCDSSVIHIYGKSQTLCGRKM 343 (354)
Q Consensus 295 pl~~~----~~~~~~~m~nilg~~~~~~~~~~~~~~~~~~~YgK~~~r~~Rkm 343 (354)
+|+-. .++..++-..|-+++ .+.++|...+ .+..|--|+- |+.++
T Consensus 320 kL~~~Q~di~l~GhAiE~RiyAED--p~r~FLPs~G-~l~~~~~P~~-~~vRv 368 (645)
T COG4770 320 KLPFTQDDIPLNGHAIEARIYAED--PARGFLPSTG-RLTRYRPPAG-PGVRV 368 (645)
T ss_pred CCCCCCCCCCCCCEEEEEEEECCC--CCCCCCCCCC-EEEEECCCCC-CCEEC
T ss_conf 577665665446505788873347--5557667885-0576628888-84312
No 21
>COG0439 AccC Biotin carboxylase [Lipid metabolism]
Probab=100.00 E-value=7.8e-32 Score=234.20 Aligned_cols=308 Identities=19% Similarity=0.230 Sum_probs=244.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEECC-------CCCHHHHHHHHHH--CCEEEE--
Q ss_conf 7899980989899999999887978999967677713--42268279878-------9999999999741--999998--
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAAR-------HDDIKALNTFADI--CDYATY-- 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~~-------~~D~~~l~~~~~~--~Dvit~-- 70 (354)
+||+|...|..+.-...+|++||++++++.+.++..+ ..++|+.+... |.|.+.+...++. +|+|-.
T Consensus 3 ~kiLIanrGeia~ri~ra~~~lGi~tvav~s~~d~~~~~~~~adeav~i~~~~~~~syl~i~~ii~~a~~~gadai~pGy 82 (449)
T COG0439 3 KKILIANRGEIAVRIIRACRELGIETVAVYSEADADALHVALADEAVCIGPAPSADSYLNIDAIIAAAEETGADAIHPGY 82 (449)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC
T ss_conf 36999558536899999999849858999661002252566375679838865034565188899899860876672350
Q ss_pred C--CCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHCCCCEEEEECC
Q ss_conf 7--72221133344430--200348767787631527888887650588674321--00068888641001312554023
Q gi|254780158|r 71 E--SENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYE--INSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 71 E--~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~--v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
. .|| ....+.+++ ..-+.|++++++.+.||..+|+.++++|+|++|+.. +.+.+++.+.++.+|||+||||.
T Consensus 83 gflsen--~~fae~~~~~gl~fiGP~~~~i~~mgdK~~ar~~~~~aGVP~vpgs~~~~~~~ee~~~~a~~iGyPVivKa~ 160 (449)
T COG0439 83 GFLSEN--AAFAEACAEAGLTFIGPSAEAIRRMGDKITARRLMAKAGVPVVPGSDGAVADNEEALAIAEEIGYPVIVKAA 160 (449)
T ss_pred HHHHCC--HHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
T ss_conf 342178--899999997497510849899997445899999999749995899787768889999999871997899977
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHC--------CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCCC-CCEE
Q ss_conf 4675556645446746778987513--------555010111145644332010146654139970533-45435-5505
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYASL--------GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHVN-GILH 214 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~~~--------~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~~-gil~ 214 (354)
.|| .|+|++++++.+++..++... ++..+++|+|+...+.+.+.+.-|..|.+....--. .+|+. +.+.
T Consensus 161 ~Gg-Gg~G~r~v~~~~el~~a~~~~~~ea~~~fg~~~v~iEk~i~~~rhievqv~gD~~g~~i~l~eRdcsiqrr~qkvi 239 (449)
T COG0439 161 AGG-GGRGMRVVRNEEELEAAFEAARGEAEAAFGNPRVYLEKFIEGPRHIEVQVLGDGHGNVIHLGERDCSIQRRHQKVI 239 (449)
T ss_pred CCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEE
T ss_conf 889-9654799799999999999999888875589727863410588468999987686658999864668767766155
Q ss_pred EEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHC
Q ss_conf 8985278-787899999999886775402467753104553884089994125704560462100135889999999818
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITN 293 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~g 293 (354)
-.+|+. ++++.+.++-..+.++++.++|.|..++||..+.+|+.||.|||||.---.+.|...+.++.-+.|+|..+|
T Consensus 240 -eeapsp~~~~e~r~~i~~~a~~a~~~~gY~gagtvEfl~~~~~~~yfiEmN~Rlqveh~vte~vtGiDlv~~qi~ia~g 318 (449)
T COG0439 240 -EEAPSPLLTEELREKIGEAAVRAAKLIGYRGAGTVEFLYDSNGEFYFIEMNTRLQVEHPVTEMVTGIDLVKEQIRIAAG 318 (449)
T ss_pred -EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCC
T ss_conf -3058888999999999999999998638777756999982799879999864113676301000004289999999769
Q ss_pred CCCCCCH----HCCCEEEEEEECCCC
Q ss_conf 8999700----048567999755770
Q gi|254780158|r 294 LPLGNPN----RHSNCVMYNIIGSDI 315 (354)
Q Consensus 294 lpl~~~~----~~~~~~m~nilg~~~ 315 (354)
.++.-.+ +...++-..|..++.
T Consensus 319 e~l~~~q~~~~~~g~aie~Ri~aedp 344 (449)
T COG0439 319 EPLSLKQEDIKFRGHAIECRINAEDP 344 (449)
T ss_pred CCCCCCCCCCCCCCEEEECEEECCCC
T ss_conf 98887777756133131000105688
No 22
>TIGR01235 pyruv_carbox pyruvate carboxylase; InterPro: IPR005930 In the postabsorptive state, blood glucose concentration is kept constant by a combination of glycogenolysis and gluconeogenesis. During prolonged fasting, when hepatic glycogen is exhausted, gluconeogenesis becomes the only source of plasma glucose. Gluconeogenesis (the production of new glucose molecules) occurs mainly in liver and, to a small extent, in kidneys. Pyruvate carboxylase (6.4.1.1 from EC), a member of the biotin-dependent enzyme family, catalyses the ATP-dependent carboxylation of pyruvate to oxaloacetate, thus playing a crucial role in gluconeogenesis. ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate Most well characterised forms of active enzyme consist of four identical subunits arranged in a tetrahedron-like structure. Each subunit contains three functional domains: the biotin carboxylation domain, the transcarboxylation domain and the biotin carboxyl carrier domain.; GO: 0004736 pyruvate carboxylase activity, 0006094 gluconeogenesis, 0005737 cytoplasm.
Probab=100.00 E-value=1.8e-32 Score=238.54 Aligned_cols=296 Identities=17% Similarity=0.191 Sum_probs=242.0
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECCCCCCHH--HCCCEEEEC--------------CCCCHHHHHHHHHH--CCEEEE---
Q ss_conf 898999999998879789999676777134--226827987--------------89999999999741--999998---
Q gi|254780158|r 12 GQLARMLSMSAARLGFCTVILDPDSNCPAN--QVSNQQIAA--------------RHDDIKALNTFADI--CDYATY--- 70 (354)
Q Consensus 12 GqL~rml~~aA~~lG~~v~v~d~~~~~pa~--~~ad~~~~~--------------~~~D~~~l~~~~~~--~Dvit~--- 70 (354)
|+.+--.=.||.+||++++++-+.+|.-+. +.||+.|.. .|.+.+.+.+.|++ +|+|-+
T Consensus 8 gEIAIRvFRAa~EL~i~tVAvYs~eD~~~~Hr~KADEaY~vG~g~~lard~~Pv~AYL~I~eiI~vAk~~~vDaiHPGYG 87 (1169)
T TIGR01235 8 GEIAIRVFRAANELGIRTVAVYSEEDKLSLHRQKADEAYLVGEGPQLARDLKPVEAYLSIDEIIRVAKKNKVDAIHPGYG 87 (1169)
T ss_pred CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCC
T ss_conf 65202464231013872699965315745574023410011476310102687213047156989960078977708856
Q ss_pred -CCCCCCHHHHHHHHH-C-CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf -772221133344430-2-0034876778763152788888765058867432--1000688886410013125540234
Q gi|254780158|r 71 -ESENIPEKSISYLST-L-LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTRR 145 (354)
Q Consensus 71 -E~E~i~~~~l~~l~~-~-~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~~ 145 (354)
-.|+.. -.+.+.+ + +-+-|+++.++...||...|+.+.++|||+.|-. .+++.+++.++++..|||+|+|++-
T Consensus 88 fLSE~~~--Fa~~v~~aGi~FIGP~a~~~~~~GdKV~AR~~A~~aGvPvvPgt~Gp~~t~eev~~f~~~~GYPvi~KAs~ 165 (1169)
T TIGR01235 88 FLSENSE--FADAVVKAGIVFIGPKAEVLDQLGDKVAARNLAIKAGVPVVPGTDGPVETLEEVLDFAKAIGYPVIIKASY 165 (1169)
T ss_pred CCCCCHH--HHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 2248878--99999868956737974777540576899988887788763688687525999999997569958987216
Q ss_pred CCCCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC---CCCCCCCEE
Q ss_conf 675556645446746778987--------513555010111145644332010146654139970533---454355505
Q gi|254780158|r 146 LGYDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ---NTHVNGILH 214 (354)
Q Consensus 146 ~GydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e---n~~~~gil~ 214 (354)
|| .|||.++|++.+|+++.+ +.+|++++.||+||+--|+|.|.+.-|..||++.. -| .+|+.+.=.
T Consensus 166 GG-GGRGMRvvR~~~dv~~~~~rA~sEA~AAFGnd~~yvEklie~pkHiEvQ~LGD~~GNVVHL--FERDCSVQRRhQKV 242 (1169)
T TIGR01235 166 GG-GGRGMRVVRSEEDVADAFQRAKSEAKAAFGNDEVYVEKLIERPKHIEVQLLGDKHGNVVHL--FERDCSVQRRHQKV 242 (1169)
T ss_pred CC-CCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEE--EECCCCCEEECCEE
T ss_conf 88-9720168607567999988876887310489806985102488207898763488987888--75077620005507
Q ss_pred EEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC-EEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHH
Q ss_conf 8985278-787899999999886775402467753104553884-08999412570456046210013588999999981
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDG-NVIANEMAPRVHNSGHWTEASCVISQFEQHIRSIT 292 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg-~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~ 292 (354)
-=+|||. ||+++++++.++|.||+++.||.+.-+|||.++.++ +.||.||+||+-====+|.+-..++--.-+|+..-
T Consensus 243 vE~APA~~Ls~e~Rd~~~~~AvkLAk~~nY~nAGTvEFL~d~~~G~FYFIEvNpRiQVEHTvTE~iTGiDiV~aQI~va~ 322 (1169)
T TIGR01235 243 VEVAPAPSLSREVRDEIAEYAVKLAKEVNYINAGTVEFLVDNDTGKFYFIEVNPRIQVEHTVTEEITGIDIVQAQIRVAE 322 (1169)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHC
T ss_conf 88678877888899999999999987428988872488555488937789988800011558646734037778999965
Q ss_pred CCCCCCCHHCCC-EEEEEEEC
Q ss_conf 889997000485-67999755
Q gi|254780158|r 293 NLPLGNPNRHSN-CVMYNIIG 312 (354)
Q Consensus 293 glpl~~~~~~~~-~~m~nilg 312 (354)
|..|+++++.-| =--+...|
T Consensus 323 G~sL~~~~~g~~~Q~~I~t~G 343 (1169)
T TIGR01235 323 GASLPSKQLGVPEQEDIKTRG 343 (1169)
T ss_pred CCCCCCCCCCCCCCCCEEEEE
T ss_conf 574687757788654403501
No 23
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase; InterPro: IPR004549 This family represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase (6.4.1.2 from EC) is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase (6.3.4.14 from EC), and two subunits of carboxyl transferase in a 2:2 complex. In the first step of long-chain fatty acid synthesis, biotin carboxylase catalyses the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-coA. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase). In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.; GO: 0016874 ligase activity.
Probab=100.00 E-value=9.6e-32 Score=233.59 Aligned_cols=316 Identities=19% Similarity=0.251 Sum_probs=252.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC--CCCCHHHCCCEEEEC-------CCCCHHHHHHHHH--HCCEEE---
Q ss_conf 78999809898999999998879789999676--777134226827987-------8999999999974--199999---
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPD--SNCPANQVSNQQIAA-------RHDDIKALNTFAD--ICDYAT--- 69 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~--~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~--~~Dvit--- 69 (354)
+||+|===|+.|.-...||++||+.++++-+. .|+-..++||+.+++ ||.+...+.+.|+ .+|+|-
T Consensus 3 ~K~lIANRGEIA~RIiRAC~ElGi~TVAVyS~aD~dalHV~LADEavCIGea~S~kSYL~IpnI~aAA~~tG~~AiHPGY 82 (451)
T TIGR00514 3 DKILIANRGEIALRIIRACKELGIATVAVYSTADRDALHVLLADEAVCIGEAPSAKSYLNIPNIIAAAEITGADAIHPGY 82 (451)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEECCCC
T ss_conf 54899526067889999888649863986004413323434302530068622112441158899988774880762887
Q ss_pred -ECCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCC--C-CCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf -8772221133344430--2003487677876315278888876505886743--2-10006888864100131255402
Q gi|254780158|r 70 -YESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDF--Y-EINSQESLTNILGGFKGKGILKT 143 (354)
Q Consensus 70 -~E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~--~-~v~s~~el~~~~~~~g~P~vlKp 143 (354)
|-.||-+.. +.+++ ..-+-|++++++...||...|+.++++|+|+.|- . .+++.++..+.++++|||+|+|.
T Consensus 83 GFLSENA~FA--e~c~~~g~~FIGP~pe~Ir~MGDK~~A~~~mKkaGVP~VPGS~GP~~~~~~e~~~~A~~IGyPv~IKA 160 (451)
T TIGR00514 83 GFLSENADFA--EICEDHGITFIGPSPEAIRLMGDKVTAKETMKKAGVPVVPGSDGPLVEDEEEAVRIAKEIGYPVIIKA 160 (451)
T ss_pred CHHHHHHHHH--HHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 7344312478--89873882666787120112688689999997488766238888631027889999974789689996
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCC-CCCE
Q ss_conf 34675556645446746778987--------513555010111145644332010146654139970533-4543-5550
Q gi|254780158|r 144 RRLGYDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHV-NGIL 213 (354)
Q Consensus 144 ~~~GydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~-~gil 213 (354)
+-|| .|||..++++++++..++ +.+++..+++|+||+.-|.+.+.|.-|..||++++.--. .+|+ ++.|
T Consensus 161 ~AGG-GGRGmR~vR~~~El~~~~~~a~~EA~AAF~N~~VYiEKfienPRH~E~QVLAD~~GN~vyLgERDCSiQRR~QKl 239 (451)
T TIGR00514 161 TAGG-GGRGMRVVREEDELVKLIKAARAEAAAAFNNDGVYIEKFIENPRHVEIQVLADKYGNVVYLGERDCSIQRRNQKL 239 (451)
T ss_pred ECCC-CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCHHCCCCCE
T ss_conf 2589-972258862868999999999999974028796278633369940799987517888789712146200046544
Q ss_pred EEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCE-EEEEEECCCCCCCEE-EEHHHCCCCHHHHHHHH
Q ss_conf 58985278-7878999999998867754024677531045538840-899941257045604-62100135889999999
Q gi|254780158|r 214 HKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGN-VIANEMAPRVHNSGH-WTEASCVISQFEQHIRS 290 (354)
Q Consensus 214 ~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~-i~vnEiaPR~Hnsgh-~t~~~~~~sqfe~h~ra 290 (354)
.+ -+||+ |++++++++=+.|.++++..||.|+-+|||+++.+|+ .||.||+.|.-= =| +|..-..++--+.|||.
T Consensus 240 lE-EaPsP~Lt~ElR~~~G~~Av~aA~~iGY~GaGTvEFLld~~~~rFYFmEMNTRIQV-EHPVTEmvtGvDL~keQirv 317 (451)
T TIGR00514 240 LE-EAPSPALTSELREKMGDAAVKAAKSIGYTGAGTVEFLLDKNGQRFYFMEMNTRIQV-EHPVTEMVTGVDLIKEQIRV 317 (451)
T ss_pred EE-ECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCEEEEEEECCEEEE-EECCEEEEECHHHHHHHHHH
T ss_conf 65-46888778899999989999999864980035168886258873577651760211-10320146002578889987
Q ss_pred HHCCCCC----CCHHCCCEEEEEEECCCCCCHHHHHCCCC
Q ss_conf 8188999----70004856799975577022788972899
Q gi|254780158|r 291 ITNLPLG----NPNRHSNCVMYNIIGSDIDQYEQWLHCDS 326 (354)
Q Consensus 291 i~glpl~----~~~~~~~~~m~nilg~~~~~~~~~~~~~~ 326 (354)
..|.+|. ++.+...++-=.|-.+| ..+++..-|+
T Consensus 318 A~G~~L~~kQe~v~~~GHaieCRINAED--P~~~F~PsPG 355 (451)
T TIGR00514 318 AAGEKLSLKQEDVKLRGHAIECRINAED--PIKNFLPSPG 355 (451)
T ss_pred HCCCCCCCCCCEEEEEEEEEEEEECCCC--CCCCCCCCCC
T ss_conf 3789566431147999889986514558--7877868885
No 24
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=100.00 E-value=2.8e-30 Score=223.76 Aligned_cols=294 Identities=16% Similarity=0.221 Sum_probs=183.8
Q ss_pred CCCEEEEECCC-----H------HHHHHHHHHHHCCCEEEEEECCCCCCHHH--CCCEEEECCCCCHHHHHHHH--HHCC
Q ss_conf 88789998098-----9------89999999988797899996767771342--26827987899999999997--4199
Q gi|254780158|r 2 KKKTIGIIGGG-----Q------LARMLSMSAARLGFCTVILDPDSNCPANQ--VSNQQIAARHDDIKALNTFA--DICD 66 (354)
Q Consensus 2 ~~k~IgIlG~G-----q------L~rml~~aA~~lG~~v~v~d~~~~~pa~~--~ad~~~~~~~~D~~~l~~~~--~~~D 66 (354)
++|+|+|||+| | -+...+.+.+++|++++++..+|...... .||+.|.-+. ..+.+...+ ++++
T Consensus 552 ~~~kvlvlGsGp~rIGqgiEFDY~~v~a~~alk~~G~~~imIN~NPETVSTD~d~sDrLYFEpl-t~E~V~~I~~~E~p~ 630 (1063)
T PRK05294 552 DRKKVMILGGGPNRIGQGIEFDYCCVHAALALREAGYETIMVNCNPETVSTDYDTSDRLYFEPL-TLEDVLEIIEKEKPK 630 (1063)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEECCC-CHHHHHHHHHHHCCC
T ss_conf 8863799657773204442300679999999996598158953781111156566761454368-899999999975898
Q ss_pred EEEECCC-CCCHHHHHHHHH-CCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 9998772-221133344430-20034-87677876315278888876505886743210006888864100131255402
Q gi|254780158|r 67 YATYESE-NIPEKSISYLST-LLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKT 143 (354)
Q Consensus 67 vit~E~E-~i~~~~l~~l~~-~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp 143 (354)
.|...|. +.+......|++ ++++. .+++++..+.||.+.+++++++||+.|+|..+.|.+|+.++++.+|||+++.|
T Consensus 631 gvi~qfGGQt~~nla~~L~~~g~~ilGts~~~Id~aEDR~~F~~~l~~l~i~qp~~~~a~s~~ea~~~a~~iGyPvlvRP 710 (1063)
T PRK05294 631 GVIVQFGGQTPLKLAKALEAAGVPILGTSPDAIDLAEDRERFQKLLEKLGIKQPPNGTATSVEEALEIAEEIGYPVLVRP 710 (1063)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCEEECC
T ss_conf 79997388367899999998799477788788787875888999998659999997076689999999986498668434
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHHH----CCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCC----CCEE
Q ss_conf 34-67555664544674677898751----355501011114564433201014665413997053345435----5505
Q gi|254780158|r 144 RR-LGYDGKGQKVYHENDCTQNLYAS----LGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVN----GILH 214 (354)
Q Consensus 144 ~~-~GydGkG~~~i~~~~~l~~~~~~----~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~----gil~ 214 (354)
+. . +|+|..++.+.++++..... ..+.++++++|+....|+.|.+++|.. ++.++.+.||+..- |+-.
T Consensus 711 SyVL--GG~~M~iv~~~~eL~~yl~~a~~vs~~~pvlIdkfl~ga~E~eVDai~Dg~-~v~I~gImEHIE~AGVHSGDS~ 787 (1063)
T PRK05294 711 SYVL--GGRAMEIVYDEEELERYMREAVKVSPDHPVLIDRFLEDAIEVDVDAICDGE-DVLIGGIMEHIEEAGVHSGDSA 787 (1063)
T ss_pred CCCC--CCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEHHHHHCHHHHHHEEECCC-EEEEEEEEEECCCCCCCCCCCE
T ss_conf 3102--577147856999999999999863899977863543202454430231488-4899998720014575667842
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCC
Q ss_conf 89852787878999999998867754024677531045538840899941257045604621001358899999998188
Q gi|254780158|r 215 KSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNL 294 (354)
Q Consensus 215 ~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~gl 294 (354)
.++-|.+++++..+++++++.+++++|+.+|.+.|.|.+ +|+++||.|++||...|=-+.=-+....--+.-.|+.+|.
T Consensus 788 ~V~Pp~~Ls~~~~~~i~~~t~~ia~~l~v~G~~NiQf~v-k~~~vyVIE~NpRaSRtvPfvSKatg~pl~~iAtk~~lG~ 866 (1063)
T PRK05294 788 CSLPPYTLSEEIIDEIREQTKKLALELNVVGLMNVQFAV-KDDEVYVIEVNPRASRTVPFVSKATGVPLAKIAARVMLGK 866 (1063)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE-CCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHCCC
T ss_conf 881685589999999999999999855666642033554-0983899994474445304457641997999999998299
Q ss_pred CCCCCH
Q ss_conf 999700
Q gi|254780158|r 295 PLGNPN 300 (354)
Q Consensus 295 pl~~~~ 300 (354)
+|.+..
T Consensus 867 ~l~~l~ 872 (1063)
T PRK05294 867 KLAELG 872 (1063)
T ss_pred CHHHCC
T ss_conf 734427
No 25
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit; InterPro: IPR006275 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates , . CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate . The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain . CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites . The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein . The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP . There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia . CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains . This entry represents glutamine-dependent CPSase (6.3.5.5 from EC) from prokaryotes and eukaryotes (CPSase II). ; GO: 0004086 carbamoyl-phosphate synthase activity, 0006807 nitrogen compound metabolic process.
Probab=99.98 E-value=8.5e-31 Score=227.22 Aligned_cols=320 Identities=15% Similarity=0.172 Sum_probs=233.1
Q ss_pred CCCEEEEECCC-----H------HHHHHHHHHHHCCCEEEEEECCCCCC--HHHCCCEEEECCCCCHHHHHHHH--HHCC
Q ss_conf 88789998098-----9------89999999988797899996767771--34226827987899999999997--4199
Q gi|254780158|r 2 KKKTIGIIGGG-----Q------LARMLSMSAARLGFCTVILDPDSNCP--ANQVSNQQIAARHDDIKALNTFA--DICD 66 (354)
Q Consensus 2 ~~k~IgIlG~G-----q------L~rml~~aA~~lG~~v~v~d~~~~~p--a~~~ad~~~~~~~~D~~~l~~~~--~~~D 66 (354)
+-|+|+||||| | .|-.-|.|.|+-||+|+.+.||+-.. -..+||+.|.-+. ..+.+.+.+ ||+|
T Consensus 5 ~i~kvLviGSGPi~IGQAaEFDYSGsQAcKALkEEGy~viLVNsNpATimTD~~~AD~vY~ePl-T~e~V~~IIEKERPD 83 (1089)
T TIGR01369 5 DIKKVLVIGSGPIVIGQAAEFDYSGSQACKALKEEGYEVILVNSNPATIMTDPEMADKVYIEPL-TPEAVEKIIEKERPD 83 (1089)
T ss_pred CCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCCCCCC-CHHHHHHHHHHCCCC
T ss_conf 8878999666731131202302478999999876495799975884723388668660025254-588886665316866
Q ss_pred EEEECCCC-CCHHHHH------HHHH-CCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 99987722-2113334------4430-20034-87677876315278888876505886743210006888864100131
Q gi|254780158|r 67 YATYESEN-IPEKSIS------YLST-LLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKG 137 (354)
Q Consensus 67 vit~E~E~-i~~~~l~------~l~~-~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~ 137 (354)
.|-+.+.. -..-+.- .|++ ++.+. -+.+|++.+-||.++|+++.+.|.|+|+...+++.+|+.++++.+||
T Consensus 84 giL~t~GGQTALNlav~L~~~GVL~kYgV~vLGT~~eaI~kaEDRe~F~~~M~ei~~pvp~S~~~~~~eEA~~~a~~~Gy 163 (1089)
T TIGR01369 84 GILPTLGGQTALNLAVELEESGVLEKYGVEVLGTPVEAIKKAEDRELFREAMKEIGEPVPKSEIVHSVEEALKAAKEIGY 163 (1089)
T ss_pred CHHCCCCCHHHHHHHHHHHHCCCCHHHCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 00025760357777886620685145291785234243520202799999999738998811002788999999962689
Q ss_pred EEEEECC-CCCCCCCCCCCCCCHHHHHHHHHHC----CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCC-----
Q ss_conf 2554023-4675556645446746778987513----55501011114564433201014665413997053345-----
Q gi|254780158|r 138 KGILKTR-RLGYDGKGQKVYHENDCTQNLYASL----GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNT----- 207 (354)
Q Consensus 138 P~vlKp~-~~GydGkG~~~i~~~~~l~~~~~~~----~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~----- 207 (354)
|+|+.|+ ++| |.|--++.|.+|+++..+.. .=..|+|||.|-+=+|+..=|+||.+|++.+-.-+||+
T Consensus 164 PviVRpAftLG--G~GgGiA~n~eEL~~~~~~aL~~SpI~qvL~EkSl~GWKE~EYEVmRD~~dNCItVCNmEN~DPmGV 241 (1089)
T TIGR01369 164 PVIVRPAFTLG--GTGGGIASNEEELKEIVERALSASPINQVLVEKSLAGWKEIEYEVMRDSKDNCITVCNMENFDPMGV 241 (1089)
T ss_pred CEEECCCHHCC--CCCCCEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEEECCCCCCCCCE
T ss_conf 68981003238--8998522577899999998863088855750110033178898898626878899974547689845
Q ss_pred CC-CCCEEEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCC-CCCEEEECCC-CEEEEEEECCCCCCCEEEEHHHCCCCH
Q ss_conf 43-555058985278-7878999999998867754024677-5310455388-408999412570456046210013588
Q gi|254780158|r 208 HV-NGILHKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGI-LCIEFFVTND-GNVIANEMAPRVHNSGHWTEASCVISQ 283 (354)
Q Consensus 208 ~~-~gil~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv-~~VEffv~~d-g~i~vnEiaPR~Hnsgh~t~~~~~~sq 283 (354)
|. ++| ++||+. ||+.-++.+++.|.||.++||.+|= -.|+|=+.+| ++.||.||+||+.-|= +--|
T Consensus 242 HTGdSI---VVAPSQTLtD~EYQ~LR~~sikIIR~lGi~GgGCNvQFAL~P~s~~Y~vIEvNPRvSRSS------ALAS- 311 (1089)
T TIGR01369 242 HTGDSI---VVAPSQTLTDKEYQMLRDASIKIIRELGIVGGGCNVQFALDPDSGRYYVIEVNPRVSRSS------ALAS- 311 (1089)
T ss_pred EECCCE---EECCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCEEEEEECCCCCHHH------HHHH-
T ss_conf 707833---650763688078999999999999873912167421321507897069998678821358------9876-
Q ss_pred HHHHHHHHHCCCCCCCHHC-C-----CEEEEEEECCC---CCCHHHH--HCCCCCEEEECCCCCCCCC
Q ss_conf 9999999818899970004-8-----56799975577---0227889--7289968997088768979
Q gi|254780158|r 284 FEQHIRSITNLPLGNPNRH-S-----NCVMYNIIGSD---IDQYEQW--LHCDSSVIHIYGKSQTLCG 340 (354)
Q Consensus 284 fe~h~rai~glpl~~~~~~-~-----~~~m~nilg~~---~~~~~~~--~~~~~~~~~~YgK~~~r~~ 340 (354)
=.+|.||-.+-.. + +=++.-|-|.. +++.-++ -.+|.|.|+=|-.-..+-|
T Consensus 312 ------KATGYPiAkvAAKLAvGY~LdEl~N~vT~~T~A~FEPSLDYvVvKIPRW~f~KF~~v~r~LG 373 (1089)
T TIGR01369 312 ------KATGYPIAKVAAKLAVGYGLDELKNPVTKTTPASFEPSLDYVVVKIPRWDFDKFEGVDRKLG 373 (1089)
T ss_pred ------HHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCC
T ss_conf ------65166289999998468878765688888535410467480886067887221057885415
No 26
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=99.98 E-value=1.5e-29 Score=218.76 Aligned_cols=294 Identities=16% Similarity=0.129 Sum_probs=183.7
Q ss_pred CEEEEECCC-----H------HHHHHHHHHHHCCCEEEEEECCCCCCHH--HCCCEEEECCCCCHHHHHHHH--HHCCEE
Q ss_conf 789998098-----9------8999999998879789999676777134--226827987899999999997--419999
Q gi|254780158|r 4 KTIGIIGGG-----Q------LARMLSMSAARLGFCTVILDPDSNCPAN--QVSNQQIAARHDDIKALNTFA--DICDYA 68 (354)
Q Consensus 4 k~IgIlG~G-----q------L~rml~~aA~~lG~~v~v~d~~~~~pa~--~~ad~~~~~~~~D~~~l~~~~--~~~Dvi 68 (354)
|+|+||||| | .|-.-+.|.++.||+|+.++++|..... ..||..|.-+. ..+.+.+.+ +++|.|
T Consensus 8 kkvLiiGsGpi~IGqa~EfDysg~qA~~aLkeeG~~vvlvN~NPaTi~TD~~~ad~vY~ePl-t~e~v~~Ii~~E~Pd~i 86 (1068)
T PRK12815 8 KKILVIGSGPIIIGQAAEFDYSGTQACKALKEEGYQVVLVNPNPATIMTDPEPADTVYFEPL-TLEFVKRIIRREKPDAL 86 (1068)
T ss_pred CEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCEEEECCC-CHHHHHHHHHHHCCCEE
T ss_conf 88999898815312344656569999999998699899988983262089874443788589-89999999997499989
Q ss_pred EECCCC-CCHHHHHHHHH-------CCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 987722-21133344430-------20034-8767787631527888887650588674321000688886410013125
Q gi|254780158|r 69 TYESEN-IPEKSISYLST-------LLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKG 139 (354)
Q Consensus 69 t~E~E~-i~~~~l~~l~~-------~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~ 139 (354)
.+.+.. .+......|.+ ++++. -++++++.+.||.+.|++++++|+|+|+...+++.+++.++++++|||+
T Consensus 87 l~~~GGqtaLnla~~L~~~GiL~k~~v~llGt~~~~I~~aedR~~f~~~m~~ig~~~~~s~~~~s~~ea~~~a~~ig~Pv 166 (1068)
T PRK12815 87 LATLGGQTALNLAVKLLEAGILEQYGVELLGTNVEAIQKGEDRERFRALMKELGEPVPESEIVDSEEEALRFAEKIGFPI 166 (1068)
T ss_pred EECCCCHHHHHHHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCE
T ss_conf 86777847999999999759778659649679999998645999999999976999997052199999999998669989
Q ss_pred EEECCCCCCCCCCCCCCCCHHHHHHHHHHC----CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCE--
Q ss_conf 540234675556645446746778987513----55501011114564433201014665413997053345435550--
Q gi|254780158|r 140 ILKTRRLGYDGKGQKVYHENDCTQNLYASL----GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGIL-- 213 (354)
Q Consensus 140 vlKp~~~GydGkG~~~i~~~~~l~~~~~~~----~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil-- 213 (354)
+++|.. -..|.|..++++.++++...... ...++++|+++..-+|+.+-++||.+|++.+...+||+-.-|+-
T Consensus 167 ivRps~-~lGg~g~~i~~n~~eL~~~~~~~~~~S~~~~vlie~sl~gwkEie~ev~RD~~~n~i~vc~mEnidP~GIHTG 245 (1068)
T PRK12815 167 IVRPAY-TLGGDGGGIAENEEELEQLARQGLQASPIHQCLLEESIAGWKEIEYEVMRDRNDNCVTVCNMENIDPVGVHTG 245 (1068)
T ss_pred EEEECC-CCCCCCCEEECCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCC
T ss_conf 998361-0668965044599999999999996399985786501179769999999988989799854123544543567
Q ss_pred -EEEEECC-CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHH
Q ss_conf -5898527-87878999999998867754024677531045538-84089994125704560462100135889999999
Q gi|254780158|r 214 -HKSIVPA-SISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTN-DGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRS 290 (354)
Q Consensus 214 -~~s~~Pa-~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~-dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~ra 290 (354)
.-+++|+ .++++..+++++.+.+|+++||.+|...|.|=+.+ ++++||.|++||+..|--+.--+..+.-=..-.+.
T Consensus 246 DSi~vaP~qTL~d~e~q~lR~~a~~I~~~lgv~G~~NiQFAv~p~~~~~~VIEvNPR~SRssalaSKATGyPiAkvaakl 325 (1068)
T PRK12815 246 DSIVVAPSQTLTDDEYQMLRSASLKIIRALGVVGGCNIQFALDPRSKQYYVIEVNPRVSRSSALASKATGYPIAKIAAKL 325 (1068)
T ss_pred CCCEECCCCCCCHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 74534578126999999999999999997280101057998869998289996478622024788875088489999998
Q ss_pred HHCCCCCCC
Q ss_conf 818899970
Q gi|254780158|r 291 ITNLPLGNP 299 (354)
Q Consensus 291 i~glpl~~~ 299 (354)
.+|..|.+.
T Consensus 326 alG~~L~ei 334 (1068)
T PRK12815 326 AVGYTLDEI 334 (1068)
T ss_pred HCCCCHHHC
T ss_conf 638877770
No 27
>KOG0238 consensus
Probab=99.97 E-value=1e-29 Score=219.98 Aligned_cols=314 Identities=20% Similarity=0.224 Sum_probs=242.6
Q ss_pred EEECCCHHHHHHHHHHHHCCCEEEEEE--CCCCCCHHHCCCEEEEC-------CCCCHHHHHHHHHH--CCEEE----EC
Q ss_conf 998098989999999988797899996--76777134226827987-------89999999999741--99999----87
Q gi|254780158|r 7 GIIGGGQLARMLSMSAARLGFCTVILD--PDSNCPANQVSNQQIAA-------RHDDIKALNTFADI--CDYAT----YE 71 (354)
Q Consensus 7 gIlG~GqL~rml~~aA~~lG~~v~v~d--~~~~~pa~~~ad~~~~~-------~~~D~~~l~~~~~~--~Dvit----~E 71 (354)
+|---|+.|.-.+..|++||++++++- ++.++-..++||+.++. +|.+.+++.+.+++ +.+|. |-
T Consensus 2 LiANRGEIAcRVirTakkmGI~tVAV~Sd~D~~SlHVk~ADeav~ig~a~~~~SYL~~~~I~~aa~~tgaqaihPGYGFL 81 (670)
T KOG0238 2 LIANRGEIACRVIRTAKKMGIRTVAVYSDADRNSLHVKMADEAVCIGPAPAAQSYLRMDKIIDAAKRTGAQAIHPGYGFL 81 (670)
T ss_pred EECCCCCEEEHHHHHHHHHCCEEEEEECCCCCCCCEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
T ss_conf 22246606511566799729758999715763432000045103428873444341378999999862884621785532
Q ss_pred CCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 72221133344430--20034876778763152788888765058867432--100068888641001312554023467
Q gi|254780158|r 72 SENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILKTRRLG 147 (354)
Q Consensus 72 ~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlKp~~~G 147 (354)
.||.... +.+++ .+-+-|++++++-..||...|+.++++|+|+.|-+ ...+.+++.+....+|||+++|+..||
T Consensus 82 SEn~~Fa--e~c~~~Gi~FiGP~~~aIrdMG~K~~sk~im~~AgVp~vpG~~g~~qs~e~~~~~a~eIgyPvMiKa~~GG 159 (670)
T KOG0238 82 SENAEFA--ELCEDAGITFIGPPPSAIRDMGDKSTSKQIMKAAGVPLVPGYHGEDQSDEEAKKVAREIGYPVMIKATAGG 159 (670)
T ss_pred CCCHHHH--HHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 3553899--99987698687988799887312577899998649961368564326679999999861985799951578
Q ss_pred CCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCC-CCCEEEEE
Q ss_conf 5556645446746778987--------513555010111145644332010146654139970533-4543-55505898
Q gi|254780158|r 148 YDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHV-NGILHKSI 217 (354)
Q Consensus 148 ydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~-~gil~~s~ 217 (354)
.|||..++.+++|.+..+ ..+++..+++|+||+..|.+.|.+-.|..|+.+.+---+ .+|+ ++... --
T Consensus 160 -GGkGMria~~~~ef~~~~~~ak~Ea~~sFGdd~~llEkfi~npRHiEvQv~gD~hGnav~l~ERdCSvQRRnQKii-EE 237 (670)
T KOG0238 160 -GGKGMRIAWSEEEFEEGLESAKQEAAKSFGDDGMLLEKFIDNPRHIEVQVFGDKHGNAVHLGERDCSVQRRNQKII-EE 237 (670)
T ss_pred -CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCHHHHHHHHH-HC
T ss_conf -8763175148688999999888888763186411077763687548999973477768885045442423211566-30
Q ss_pred ECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 5278-787899999999886775402467753104553884089994125704560462100135889999999818899
Q gi|254780158|r 218 VPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPL 296 (354)
Q Consensus 218 ~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl 296 (354)
+||. ++++.+..+-+.|.++++++||+|.-+|||.+++.+++||.||+.|..=---+|.--..++--|.++|...|-||
T Consensus 238 aPap~l~~e~R~~lgeaAv~aa~avgY~~aGTVEFi~D~~~~FyFmEmNTRLQVEHPvTEmItg~DLVewqiRvA~ge~l 317 (670)
T KOG0238 238 APAPNLPEETRRALGEAAVRAAKAVGYVGAGTVEFIVDSKDNFYFMEMNTRLQVEHPVTEMITGTDLVEWQIRVAAGEPL 317 (670)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECEEEECCCCHHHCCCHHHHHHHHHHHCCCCC
T ss_conf 89999998999999999999988638764444999983788579998402253036416321222789999998649999
Q ss_pred CC----CHHCCCEEEEEEECCCCCCHHHHHCCCC
Q ss_conf 97----0004856799975577022788972899
Q gi|254780158|r 297 GN----PNRHSNCVMYNIIGSDIDQYEQWLHCDS 326 (354)
Q Consensus 297 ~~----~~~~~~~~m~nilg~~~~~~~~~~~~~~ 326 (354)
+- +.++..+.--.|-.++ .+..++..++
T Consensus 318 p~~q~ei~l~GhafE~RiyAEd--p~~~f~P~~G 349 (670)
T KOG0238 318 PLKQEEIPLNGHAFEARIYAED--PYKGFLPSAG 349 (670)
T ss_pred CCCCCEEEECCEEEEEEEEECC--CCCCCCCCCC
T ss_conf 9770201364547899985007--7546777874
No 28
>PRK07206 hypothetical protein; Provisional
Probab=99.97 E-value=1.7e-28 Score=211.70 Aligned_cols=333 Identities=12% Similarity=0.113 Sum_probs=231.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCE-----EEECCCCCHHHHHHHHHH--CCEEEECCCCC
Q ss_conf 87899980989899999999887978999967677713422682-----798789999999999741--99999877222
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQ-----QIAARHDDIKALNTFADI--CDYATYESENI 75 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~-----~~~~~~~D~~~l~~~~~~--~Dvit~E~E~i 75 (354)
+|+|.|+=+=-.|+.++.+++++|+.++.+-++++.|....... .......|.+.+.+..+. +++|+.-.|.
T Consensus 2 ~~~vviVDp~StG~~la~a~~~~G~~~v~V~S~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~aVi~g~E~- 80 (415)
T PRK07206 2 MKKVVIVDPFSSGKFLAPAFKKRGIELIAVTSACDLDPLYYAGFDENIYRQQRIIKHIDETIEFLRQLGPDAVIAGAES- 80 (415)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCHH-
T ss_conf 8559998676518799999997398289998379884354423243434332105789999999986297299978556-
Q ss_pred CHHHHHHHHHCCCCC-CC-HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC---CCCEEEEECCCCCCCC
Q ss_conf 113334443020034-87-677876315278888876505886743210006888864100---1312554023467555
Q gi|254780158|r 76 PEKSISYLSTLLPTY-PS-SRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGG---FKGKGILKTRRLGYDG 150 (354)
Q Consensus 76 ~~~~l~~l~~~~~v~-P~-~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~---~g~P~vlKp~~~GydG 150 (354)
-+...+.|++...+. ++ +.....-+||..||+.|+++|+|+|+|..+++.+|+.++++. +|||+|+||..++ .+
T Consensus 81 gV~lAd~La~~LgLp~~N~~~~~~aRRdK~~m~~~L~~aGl~~~~~~~~~~~~e~~~~~~~~~~~~~PvVvKP~~ga-gS 159 (415)
T PRK07206 81 GVELADRLAERLGLCYANAPALSSARRNKYEMINALANAGLPAIRQIDTADWEEASAWIRVNNLWDSPVVIKPLESA-GS 159 (415)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEECCCCC-CC
T ss_conf 59999999998689989955688774599999999997599855388529999999999860557999899589999-87
Q ss_pred CCCCCCCCHHHHHHHHHHC---------CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCC---CC-CEEEEE
Q ss_conf 6645446746778987513---------5550101111456443320101466541399705334543---55-505898
Q gi|254780158|r 151 KGQKVYHENDCTQNLYASL---------GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHV---NG-ILHKSI 217 (354)
Q Consensus 151 kG~~~i~~~~~l~~~~~~~---------~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~---~g-il~~s~ 217 (354)
.|++++++.+++..+++.+ .+..+++|||++ +.|+||-.+ +.+|+..+..+.+.... ++ ......
T Consensus 160 ~gV~~c~~~~el~~a~~~i~~~~n~~g~~~~~vLveEyl~-G~EysVe~v-s~~G~h~v~~i~~y~k~~~~~~~~~~~~~ 237 (415)
T PRK07206 160 DGVFFCPDKQDAYHAFNAILGKANKLGLVNESVLVQEFLI-GTEYVVNTV-SINGNHLVTEIVRYHKTSLNRGSVVYDYD 237 (415)
T ss_pred CCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC-CCEEEEEEE-EECCCEEEEEEEEECCCCCCCCCEEEECC
T ss_conf 9989979999999999998566543578675388754146-857899999-87896899999997255689986565320
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHCCC-CCCCCCEEEECCCCEEEEEEECCCCCCCEE--EEHHHCCCCHHHHHHHHHHCC
Q ss_conf 52787878999999998867754024-677531045538840899941257045604--621001358899999998188
Q gi|254780158|r 218 VPASISQKTSLLAHSAMRKVLETLDY-VGILCIEFFVTNDGNVIANEMAPRVHNSGH--WTEASCVISQFEQHIRSITNL 294 (354)
Q Consensus 218 ~Pa~i~~~~~~~a~~~a~~i~~~L~~-~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh--~t~~~~~~sqfe~h~rai~gl 294 (354)
.+.+.++..++++.+++.+++++||. .|..+.|+++|.+|..++ |+++|.+...+ ....+...||++..+++.++-
T Consensus 238 ~~~p~~~~~~~~l~~y~~~~l~ALGi~~G~~H~Ev~lt~~gp~li-E~~~R~~G~~~~~~~~~~~g~~~~~~~v~~~l~~ 316 (415)
T PRK07206 238 ELLPCTSPEYQELVDYTKKALDALGIKNGPAHAEIMLTSDGPVLI-ETGARLDGGLHPDAARVATGFSQLDLTAQSLADP 316 (415)
T ss_pred EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE-EECCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCC
T ss_conf 356998489999999999999983877577218999828982899-9678778986478998705879999999985093
Q ss_pred C----CCCC-HHCCCEEEEEEECC------CCCCHHHHHCCCCCE-EEECCCCCCCCCCEEE
Q ss_conf 9----9970-00485679997557------702278897289968-9970887689797425
Q gi|254780158|r 295 P----LGNP-NRHSNCVMYNIIGS------DIDQYEQWLHCDSSV-IHIYGKSQTLCGRKMG 344 (354)
Q Consensus 295 p----l~~~-~~~~~~~m~nilg~------~~~~~~~~~~~~~~~-~~~YgK~~~r~~RkmG 344 (354)
. ...+ .+...+.++.++.. .++..+.+...|... +.+| .+||.++.
T Consensus 317 ~~~~~~~~~y~~~~~~~~v~Lis~~~G~l~~~~gl~~i~~Lpsf~~~~~~----~~~G~~v~ 374 (415)
T PRK07206 317 DRFRETRESYKLQAHSLNVFLISQAAGVISGKHFLRELQKLPSFKKSVYY----VNEGDNVK 374 (415)
T ss_pred HHCCCCCCCCCCCCEEEEEEEECCCCCEEECCHHHHHHHHCCCEEEEEEE----CCCCCCCC
T ss_conf 11046788766443489999853999358577269999838875379996----69979808
No 29
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=99.97 E-value=7.8e-29 Score=214.01 Aligned_cols=294 Identities=15% Similarity=0.211 Sum_probs=239.2
Q ss_pred CCCEEEEECCC-----H------HHHHHHHHHHHCCCEEEEEECCCCCCHHH--CCCEEEECCCCCHHHHHHHH--HHCC
Q ss_conf 88789998098-----9------89999999988797899996767771342--26827987899999999997--4199
Q gi|254780158|r 2 KKKTIGIIGGG-----Q------LARMLSMSAARLGFCTVILDPDSNCPANQ--VSNQQIAARHDDIKALNTFA--DICD 66 (354)
Q Consensus 2 ~~k~IgIlG~G-----q------L~rml~~aA~~lG~~v~v~d~~~~~pa~~--~ad~~~~~~~~D~~~l~~~~--~~~D 66 (354)
++|+|+|||+| | -+...+.|.+++||+++++..+|...... .+|+.|.-+. ..+.+...+ ++++
T Consensus 553 ~~~kvliLGsGP~RIGqgiEFDYc~vha~~aLr~~G~etImiN~NPETVSTDyD~sDrLYFEPl-t~E~V~~I~~~E~p~ 631 (1068)
T PRK12815 553 EKKKVLILGSGPIRIGQGIEFDYMCVHAAFALKKEGYETIMINNNPETVSTDYDTADRLYFEPI-TLEDILNVAEAENIK 631 (1068)
T ss_pred CCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEECCC-CHHHHHHHHHHHCCC
T ss_conf 9834999567871422442400258999999996897489962784312367455773575368-799999999985899
Q ss_pred EEEECCC-CCCHHHHHHHHH-CCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 9998772-221133344430-20034-87677876315278888876505886743210006888864100131255402
Q gi|254780158|r 67 YATYESE-NIPEKSISYLST-LLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKT 143 (354)
Q Consensus 67 vit~E~E-~i~~~~l~~l~~-~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp 143 (354)
.|...|. +.+......|++ ++++. .+++++..+.||.+.+++++++||+.|+|..+.|.+++.++++++|||+++.|
T Consensus 632 gVivqfGGQt~lnla~~L~~~gv~IlGts~~~Id~aEdR~~F~~ll~~l~i~~p~~~~~~~~~ea~~~a~~iGyPvlvRP 711 (1068)
T PRK12815 632 GVIVQFGGQTAINLAKPLEEAGLPILGTSPDTIDRLEDRDRFYQLLDELGLPHVPGLTATSEEEALAFAKRIGYPVLIRP 711 (1068)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCEEECC
T ss_conf 79996488236799999997699498278688642413999999999738999996354566799999986499778424
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCC----CCEEEEE
Q ss_conf 34675556645446746778987513--55501011114564433201014665413997053345435----5505898
Q gi|254780158|r 144 RRLGYDGKGQKVYHENDCTQNLYASL--GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVN----GILHKSI 217 (354)
Q Consensus 144 ~~~GydGkG~~~i~~~~~l~~~~~~~--~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~----gil~~s~ 217 (354)
+.- -+|++..++.+.++++..+... .+.++++++|++ .+|+.|.+++|. +++.+..+.||+..- |+-..++
T Consensus 712 Syv-LgG~~m~iv~~~~eL~~y~~~a~~~~~pvlIdkfl~-g~E~evDai~Dg-~~v~I~gImEHIE~AGVHSGDS~~v~ 788 (1068)
T PRK12815 712 SYV-IGGQGMAVVYDEPALEAYLEENVQQLYPILIDQFID-GKEYEVDAISDG-EDVTIPGIIEHIEQAGVHSGDSIAVL 788 (1068)
T ss_pred CCC-CCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCC-CCEEEEEEEECC-CCEEEEEEEECHHHCCCCCCCCEEEE
T ss_conf 433-577423897599999999985157888556230005-404688999649-95599996421131466568854883
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf 52787878999999998867754024677531045538840899941257045604621001358899999998188999
Q gi|254780158|r 218 VPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLG 297 (354)
Q Consensus 218 ~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~ 297 (354)
-|.+++++..+++++++.+++++|+.+|.+.|.|-+ +|+++||.|++||...|=-+.=-+....--..-.|+.+|.+|.
T Consensus 789 Pp~~Ls~~~~~~i~~~t~kia~~L~v~Gl~NiQfav-k~~~vyVIEvNpRASRTvPFvSKatG~pl~~iAtkvmlG~~L~ 867 (1068)
T PRK12815 789 PPQSLSPEQQAKIRDQAIKIAKKLGFRGIMNIQFLL-AGDEIYVLEVNPRASRTVPFVSKATGVPLAKLATKVLLGKSLA 867 (1068)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCEEECCEEEEEEE-ECCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHH
T ss_conf 898789999999999999999648354512699999-7998999996187554326678732988999999998499756
Q ss_pred CCH
Q ss_conf 700
Q gi|254780158|r 298 NPN 300 (354)
Q Consensus 298 ~~~ 300 (354)
+..
T Consensus 868 ~l~ 870 (1068)
T PRK12815 868 ELG 870 (1068)
T ss_pred HCC
T ss_conf 628
No 30
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion]
Probab=99.97 E-value=8.6e-29 Score=213.72 Aligned_cols=300 Identities=17% Similarity=0.180 Sum_probs=243.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEEC--------CCCCHHHHHHHHHH--CCEEE
Q ss_conf 887899980989899999999887978999967677713--4226827987--------89999999999741--99999
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAA--------RHDDIKALNTFADI--CDYAT 69 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~--------~~~D~~~l~~~~~~--~Dvit 69 (354)
.-++|++---|+.+--.-.||.+||++++++-+.+|--+ ...||+.|.. .|.|.|.+.+.+++ .|+|-
T Consensus 6 ~~~KvLVANRgEIAIRvFRAa~ELgi~TVAIys~ED~~S~HR~KADEsY~iG~~~~Pi~aYL~IdeII~iAk~~gaDaIh 85 (1149)
T COG1038 6 KIKKVLVANRGEIAIRVFRAANELGIKTVAIYSEEDRLSLHRFKADESYLIGEGKGPVEAYLSIDEIIRIAKRSGADAIH 85 (1149)
T ss_pred HHHEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCHHHHCCHHHHHHHHHHCCCCEEC
T ss_conf 10202550453366999998886086489985144543044303551066067887268743299999999970887313
Q ss_pred E----CCCCCCHHHHHHHHH-C-CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEE
Q ss_conf 8----772221133344430-2-0034876778763152788888765058867432--100068888641001312554
Q gi|254780158|r 70 Y----ESENIPEKSISYLST-L-LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGIL 141 (354)
Q Consensus 70 ~----E~E~i~~~~l~~l~~-~-~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vl 141 (354)
+ -.||... ...+++ + .-+-|.++.++...||...|..+.++|+|+-|-. .+++.+++.++++..|||+++
T Consensus 86 PGYGfLSEn~ef--A~~c~eaGI~FIGP~~e~ld~~GdKv~Ar~~A~~agvPvipgt~~~~~~~ee~~~fa~~~gyPvmi 163 (1149)
T COG1038 86 PGYGFLSENPEF--ARACAEAGITFIGPKPEVLDMLGDKVKARNAAIKAGVPVIPGTDGPIETIEEALEFAEEYGYPVMI 163 (1149)
T ss_pred CCCCCCCCCHHH--HHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 784324479899--999997597896888799988442888999999759985569999821299999999866985899
Q ss_pred ECCCCCCCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEE-ECCCCCCCCCC
Q ss_conf 0234675556645446746778987--------51355501011114564433201014665413997-05334543555
Q gi|254780158|r 142 KTRRLGYDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICFY-DPIQNTHVNGI 212 (354)
Q Consensus 142 Kp~~~GydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~-p~~en~~~~gi 212 (354)
|..-|| .|||..++++.+++.+++ +.+++.++.+|+||+..+.+.|.+..|..|+++.. +--=.+|+.+.
T Consensus 164 KA~~GG-GGRGMR~vr~~~~l~~~~~~AksEAkaAFG~~eVyvEk~ve~pkHIEVQiLgD~~GnvvHLfERDCSvQRRhQ 242 (1149)
T COG1038 164 KAAAGG-GGRGMRVVRSEADLAEAFERAKSEAKAAFGNDEVYVEKLVENPKHIEVQILGDTHGNVVHLFERDCSVQRRHQ 242 (1149)
T ss_pred EECCCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCHHHCCC
T ss_conf 971479-8665266258889999999988999974189806656552486526899860577878888623553310144
Q ss_pred EEEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHH
Q ss_conf 058985278-7878999999998867754024677531045538840899941257045604621001358899999998
Q gi|254780158|r 213 LHKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSI 291 (354)
Q Consensus 213 l~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai 291 (354)
-.--++||. +++++++++.+.|.|++++.+|+|.-+|||.++.||+.||.||+||+.=---.|.+-..++-...+++..
T Consensus 243 KVVE~APa~~L~~~~R~~ic~~Avkla~~~~Y~~AGTvEFLvd~~~~fyFIEvNPRiQVEHTiTE~vTgiDIV~aQi~ia 322 (1149)
T COG1038 243 KVVEVAPAPYLSPELRDEICDDAVKLARNIGYINAGTVEFLVDEDGKFYFIEVNPRIQVEHTITEEITGIDIVKAQIHIA 322 (1149)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEEEECHHHHHHHHHHH
T ss_conf 03785688889999999999999999997397656647888738886899995473456776455441216788789885
Q ss_pred HCCCCCCCHHCCC
Q ss_conf 1889997000485
Q gi|254780158|r 292 TNLPLGNPNRHSN 304 (354)
Q Consensus 292 ~glpl~~~~~~~~ 304 (354)
.|-.|+.+++--|
T Consensus 323 ~G~~l~~~e~glp 335 (1149)
T COG1038 323 AGATLHTPELGLP 335 (1149)
T ss_pred CCCCCCCCCCCCC
T ss_conf 3565687445997
No 31
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=99.97 E-value=2.3e-28 Score=210.80 Aligned_cols=294 Identities=16% Similarity=0.152 Sum_probs=232.6
Q ss_pred CCEEEEECCC-----H------HHHHHHHHHHHCCCEEEEEECCCCCCHH--HCCCEEEECCCCCHHHHHHHH--HHCCE
Q ss_conf 8789998098-----9------8999999998879789999676777134--226827987899999999997--41999
Q gi|254780158|r 3 KKTIGIIGGG-----Q------LARMLSMSAARLGFCTVILDPDSNCPAN--QVSNQQIAARHDDIKALNTFA--DICDY 67 (354)
Q Consensus 3 ~k~IgIlG~G-----q------L~rml~~aA~~lG~~v~v~d~~~~~pa~--~~ad~~~~~~~~D~~~l~~~~--~~~Dv 67 (354)
-|+|+||||| | .|..-+.|.++.|++|+.+++++...-. ..||+.|.-+. ..+.+.+.+ +++|.
T Consensus 7 ikkvLviGsGp~~IGqa~EfDysg~qa~~al~e~g~~vilvN~NpaTv~Td~~~ad~vY~ePl-t~e~v~~Ii~~E~Pd~ 85 (1063)
T PRK05294 7 IKKILIIGSGPIVIGQACEFDYSGTQACKALREEGYRVVLVNSNPATIMTDPEMADATYIEPI-TPEFVEKIIEKERPDA 85 (1063)
T ss_pred CCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCCCCEEEECCC-CHHHHHHHHHHHCCCE
T ss_conf 788999898825103723326569999999998699899987985441078776643787279-8999999999759997
Q ss_pred EEECCCC-CCHHHHHHHHH-------CCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 9987722-21133344430-------20034-876778763152788888765058867432100068888641001312
Q gi|254780158|r 68 ATYESEN-IPEKSISYLST-------LLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGK 138 (354)
Q Consensus 68 it~E~E~-i~~~~l~~l~~-------~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P 138 (354)
|...+.. .+......|.+ ++++. -+.+++..+.||.+++++++++|+|+|+...+++.+|+.++++++|||
T Consensus 86 il~~~GGQtaLnla~~L~~~GiL~~~~v~lLGt~~~~I~~aedR~~F~~~l~~i~~p~~~s~~~~s~~ea~~~a~~igyP 165 (1063)
T PRK05294 86 ILPTMGGQTALNLALELAESGVLEKYGVELIGAKLEAIDKAEDRELFKEAMKKIGLPVPRSGIAHTMEEALEVAEEIGYP 165 (1063)
T ss_pred EEECCCCHHHHHHHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCC
T ss_conf 88667780599999999975967764972756999999977789999999997699999725309999999999865998
Q ss_pred EEEECC-CCCCCCCCCCCCCCHHHHHHHHHH----CCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCE
Q ss_conf 554023-467555664544674677898751----355501011114564433201014665413997053345435550
Q gi|254780158|r 139 GILKTR-RLGYDGKGQKVYHENDCTQNLYAS----LGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGIL 213 (354)
Q Consensus 139 ~vlKp~-~~GydGkG~~~i~~~~~l~~~~~~----~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil 213 (354)
++++|. .+| |.|..++++.++++..... ....++++|+++..-+|+.+.++||.+|++.+..-.||+-.-|+-
T Consensus 166 vivRps~~LG--G~g~~i~~n~~eL~~~~~~~~~~S~~~qvLie~sl~gwkEie~ev~rD~~~n~i~v~~mEnidp~GIH 243 (1063)
T PRK05294 166 VIIRPSFTLG--GTGGGIAYNREELEEIVERGLDLSPTTEVLIEESLLGWKEYEMEVMRDKADNCIIVCSIENIDPMGVH 243 (1063)
T ss_pred EEEEECCCCC--CCCCEEECCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf 8998442167--87640434999999999999961999868966111798899999998189998999541135456456
Q ss_pred ---EEEEECC-CCCHHHHHHHHHHHHHHHHHCCCC-CCCCCEEEECC-CCEEEEEEECCCCCCCEEEEHHHCCCCHHHHH
Q ss_conf ---5898527-878789999999988677540246-77531045538-84089994125704560462100135889999
Q gi|254780158|r 214 ---HKSIVPA-SISQKTSLLAHSAMRKVLETLDYV-GILCIEFFVTN-DGNVIANEMAPRVHNSGHWTEASCVISQFEQH 287 (354)
Q Consensus 214 ---~~s~~Pa-~i~~~~~~~a~~~a~~i~~~L~~~-Gv~~VEffv~~-dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h 287 (354)
.-+++|+ .++++..+++++.+.+|+++|+.+ |...|.|-+.+ +++.||.|++||...|--+.--+..+.-=..-
T Consensus 244 tGDSi~vaP~qTL~d~e~q~lR~~a~kI~~~L~iv~G~~NiQfA~~p~~~~~~VIEvNPR~SRssalaSKaTGyPiA~va 323 (1063)
T PRK05294 244 TGDSITVAPAQTLTDKEYQMLRDASIAILREIGVETGGSNVQFAVNPKDGRYVVIEMNPRVSRSSALASKATGYPIAKVA 323 (1063)
T ss_pred CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHH
T ss_conf 66725356886589899999999999999982957364479998748998489996377500106888887388789999
Q ss_pred HHHHHCCCCCCC
Q ss_conf 999818899970
Q gi|254780158|r 288 IRSITNLPLGNP 299 (354)
Q Consensus 288 ~rai~glpl~~~ 299 (354)
.+..+|..|.+.
T Consensus 324 aklalG~~L~ei 335 (1063)
T PRK05294 324 AKLAVGYTLDEI 335 (1063)
T ss_pred HHHHHCCCHHHH
T ss_conf 998717975783
No 32
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=99.97 E-value=3.1e-29 Score=216.71 Aligned_cols=245 Identities=15% Similarity=0.157 Sum_probs=186.2
Q ss_pred CCEEEEECCCH---------HHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECC-
Q ss_conf 87899980989---------89999999988797899996767771342268279878999999999974199999877-
Q gi|254780158|r 3 KKTIGIIGGGQ---------LARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYES- 72 (354)
Q Consensus 3 ~k~IgIlG~Gq---------L~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~- 72 (354)
++||+||-||. .|+....+..+.||+|..+|++.+.. ..+. ..++|++-.-.
T Consensus 4 ~~kI~vl~GG~S~E~eVSl~S~~~v~~aL~~~~y~v~~id~~~~~~----------------~~l~--~~~~D~vf~~lH 65 (304)
T PRK01372 4 FGKVAVLMGGTSAEREVSLNSGAAVLAALREAGYDAHPIDPGEDPA----------------AELK--ELGFDRVFNALH 65 (304)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH----------------HHHH--HCCCCEEEEECC
T ss_conf 7718999367871289999999999998837599799982896467----------------7875--339999999068
Q ss_pred CCC--CHHHHHHHHH-CCCC-CCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 222--1133344430-2003-48767787631527888887650588674321000688886410013125540234675
Q gi|254780158|r 73 ENI--PEKSISYLST-LLPT-YPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGY 148 (354)
Q Consensus 73 E~i--~~~~l~~l~~-~~~v-~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~Gy 148 (354)
..- +...-..|+. ++|. ..++.+..+++||..+|++++++|||||+|..+...++..+..+.++||+|+||+.+|+
T Consensus 66 G~~GEDG~iQglLe~~~IPYtGs~~~asal~mDK~~tK~i~~~~gI~tp~~~~~~~~~~~~~~~~~l~~P~iVKP~~~GS 145 (304)
T PRK01372 66 GRGGEDGTIQGLLELLGIPYTGSGVLASALAMDKLRTKLVWQAAGLPTAPWVVLTRAEDLLAAIDKLGLPLVVKPAREGS 145 (304)
T ss_pred CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 99985649999999859983579989987765389999999986999898499865313999987618987997668886
Q ss_pred CCCCCCCCCCHHHHHHHHHHCC--CCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCE----------EEE
Q ss_conf 5566454467467789875135--5501011114564433201014665413997053345435550----------589
Q gi|254780158|r 149 DGKGQKVYHENDCTQNLYASLG--NVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGIL----------HKS 216 (354)
Q Consensus 149 dGkG~~~i~~~~~l~~~~~~~~--~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil----------~~s 216 (354)
+ .|+.++++.+++..+.+... +.++++|+||+ ++|++|-+..+ + .+|++|-...++.+ ...
T Consensus 146 S-iGv~~V~~~~el~~ai~~a~~~~~~vLvE~~I~-GrEitv~Vlg~---~--~lp~~eI~~~~~fyDy~aKY~~~~s~~ 218 (304)
T PRK01372 146 S-VGVTKVKEADELPAALELAFKYDDEVLVEKYIK-GRELTVAVLGG---K--ALPVIRIVPPGEFYDYEAKYLAGDTQY 218 (304)
T ss_pred C-CCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEC-CEEEEEEEECC---C--CCCEEEEECCCCCCCHHHCCCCCCCCE
T ss_conf 6-653896698899999999874488625450256-56999999899---7--775389945998757766125577411
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCE
Q ss_conf 85278787899999999886775402467753104553884089994125704560
Q gi|254780158|r 217 IVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSG 272 (354)
Q Consensus 217 ~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsg 272 (354)
+.||++++++.++++++|.++.++|++.|...|+||+++||++||||++|=|--|-
T Consensus 219 ~~Pa~l~~~~~~~i~~~a~~~~~aLg~~g~aRvDf~~~~~g~~~~lEiNt~PGmT~ 274 (304)
T PRK01372 219 LCPAGLPAELEAELQALALRAYKALGCRGWGRVDFMLDEDGKPYLLEVNTSPGMTS 274 (304)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 00689999999999999999999849973698899990799789998339999874
No 33
>PRK02186 argininosuccinate lyase; Provisional
Probab=99.97 E-value=1.1e-28 Score=212.91 Aligned_cols=301 Identities=15% Similarity=0.157 Sum_probs=221.3
Q ss_pred EEEEECCCH--HHHHHHHHHHHCCCEEEEEECCCC--CCHHHCCCEEEECCCCCHHHHHHHHHHC---CEEEECCCCCCH
Q ss_conf 899980989--899999999887978999967677--7134226827987899999999997419---999987722211
Q gi|254780158|r 5 TIGIIGGGQ--LARMLSMSAARLGFCTVILDPDSN--CPANQVSNQQIAARHDDIKALNTFADIC---DYATYESENIPE 77 (354)
Q Consensus 5 ~IgIlG~Gq--L~rml~~aA~~lG~~v~v~d~~~~--~pa~~~ad~~~~~~~~D~~~l~~~~~~~---Dvit~E~E~i~~ 77 (354)
.+..|=+.- .|+-....|+++|++++.+..++. .--.....+.+..|.+|.+++...+.+. +-|+.-.|-. .
T Consensus 4 ~~vFiEsNTTGTG~l~lk~A~~lG~~pv~LT~dP~rY~~L~~~~~evI~vDT~d~dal~~~v~~~~~IaGV~s~sDyy-l 82 (892)
T PRK02186 4 IFVFIESNTTGTGELLLRKALLRGFTPYFLTANRGKYPFLDAIRVVTISADTSDPDRIHRFVSSLDGVAGIMSSSEYF-I 82 (892)
T ss_pred EEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCHHH-H
T ss_conf 699995078772799999999749855898368343524675176599936999999999974236852698740544-9
Q ss_pred HHHHHHHHCCCC-CCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 333444302003-4876778763152788888765058867432100068888641001312554023467555664544
Q gi|254780158|r 78 KSISYLSTLLPT-YPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVY 156 (354)
Q Consensus 78 ~~l~~l~~~~~v-~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i 156 (354)
.....+++...+ -|++++++.|.||..+|+.|.++|+|.|.|..+.+.+++..++..+|||||+||+.++. ..||+++
T Consensus 83 ~~AA~LA~~LGLPGp~peAV~~cRdK~~~Rq~L~~aGVp~P~~~lv~~~~e~~~aAa~IGfPvVVKP~dgSG-S~GVrLc 161 (892)
T PRK02186 83 EVASEVARRLGLPAANTEAIRTCRDKKRLARTLRDHGIDVPRTHALALDAVALDALDGLTYPVVVKPRMGSG-SVGVRLC 161 (892)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEECCCCCCC-CCCEEEE
T ss_conf 999999998198998999999987199999999966999995688358878999998479998971688887-7685876
Q ss_pred CCHHHHHHHHHHC---CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCC-CCE--EEEEECCCCCHHHHHHH
Q ss_conf 6746778987513---55501011114564433201014665413997053345435-550--58985278787899999
Q gi|254780158|r 157 HENDCTQNLYASL---GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVN-GIL--HKSIVPASISQKTSLLA 230 (354)
Q Consensus 157 ~~~~~l~~~~~~~---~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~-gil--~~s~~Pa~i~~~~~~~a 230 (354)
++.+|+.+.+..+ ....+++|||++ +.|+||-.. +.+|+..+..+++-.... ... .....|++++++..+++
T Consensus 162 ~s~aEL~e~~~~l~~~r~~~vLVEEFie-GpEYSVEt~-s~~G~~~VIGIT~K~l~~~P~FVE~GH~fPApL~~~~~~~I 239 (892)
T PRK02186 162 ASVAEAAAHCAALRRAGTRAALVQAYVE-GDEYSVETL-TVARGHQVLGITRKHLGPPPHFVEIGHDFPAPLSAPQRERI 239 (892)
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCC-CCEEEEEEE-EECCCEEEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHH
T ss_conf 8999999999999715488669997156-887899999-97796799999865338997178706767899985899999
Q ss_pred HHHHHHHHHHCCC-CCCCCCEEEECCCCEEEEEEECCCCCCCEEE---EHHHCCCCHHHHHHHHHHCCCC-CCCHHCCCE
Q ss_conf 9998867754024-6775310455388408999412570456046---2100135889999999818899-970004856
Q gi|254780158|r 231 HSAMRKVLETLDY-VGILCIEFFVTNDGNVIANEMAPRVHNSGHW---TEASCVISQFEQHIRSITNLPL-GNPNRHSNC 305 (354)
Q Consensus 231 ~~~a~~i~~~L~~-~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~---t~~~~~~sqfe~h~rai~glpl-~~~~~~~~~ 305 (354)
.+++.+.++++|+ -|.-++||.+|++| ..|.||+||+- -||. -..+..+|--+..+|.-+|-+- ..|.....+
T Consensus 240 ~d~v~raL~AlGl~~GpAHTEvklT~~G-PvVIEINPRLA-GGmIP~Lve~A~GvDll~~~~~~~~g~~~~~~~~~~~~~ 317 (892)
T PRK02186 240 VRTVLRALDAVGYAFGPAHTELRVRGDT-VVIIEINPRLA-GGMIPVLLEEAFGVDLLDHVIDLHLGVAAFADPTAKRYG 317 (892)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEEECCC-EEEEEECCCCC-CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 9999999997086668832899993897-38999788544-676589998871841899999986387777897500123
Q ss_pred EEEEEE
Q ss_conf 799975
Q gi|254780158|r 306 VMYNII 311 (354)
Q Consensus 306 ~m~nil 311 (354)
+..=++
T Consensus 318 ai~f~~ 323 (892)
T PRK02186 318 AIRFVL 323 (892)
T ss_pred EEEEEE
T ss_conf 168984
No 34
>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=99.97 E-value=3.6e-28 Score=209.52 Aligned_cols=289 Identities=16% Similarity=0.170 Sum_probs=238.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--CCHHHCCCEEEEC-------CCCCHHHHHHHHHHCC--EEE---
Q ss_conf 7899980989899999999887978999967677--7134226827987-------8999999999974199--999---
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN--CPANQVSNQQIAA-------RHDDIKALNTFADICD--YAT--- 69 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~--~pa~~~ad~~~~~-------~~~D~~~l~~~~~~~D--vit--- 69 (354)
+||+|===|+.|+-.+..+|+||++.+++-+++| ++....||..+.. +|.+.|++.+.|++.+ +|.
T Consensus 2 ~~vLiANRGEIA~RiirTL~~lgi~sVAvYS~aD~~s~HV~~AD~A~~Lg~~~A~esYL~~dkil~~Ak~tGA~AI~PGY 81 (1226)
T TIGR02712 2 KTVLIANRGEIAVRIIRTLRKLGIRSVAVYSDADRASQHVLDADEAVCLGGATAAESYLDIDKILAIAKKTGAQAIHPGY 81 (1226)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCEECCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCC
T ss_conf 65677644379999999987718637986321002157823605026058954132221478999999755893874588
Q ss_pred -ECCCCCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCC-CCCCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf -8772221133344430--200348767787631527888887650588674-321000688886410013125540234
Q gi|254780158|r 70 -YESENIPEKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVD-FYEINSQESLTNILGGFKGKGILKTRR 145 (354)
Q Consensus 70 -~E~E~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~-~~~v~s~~el~~~~~~~g~P~vlKp~~ 145 (354)
|-+||-... +.|++ ..-|-|+++.++...=|-..|++++++|+|-.| .-++.|++|+.++++++|||+|||++-
T Consensus 82 GFLSENA~FA--~~C~~aGI~FvGPtpe~ir~fGLKHtAR~lA~~aGVPL~PGTgLL~sl~eA~~~A~~IGYPVMlKSTA 159 (1226)
T TIGR02712 82 GFLSENAAFA--EACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGLLESLDEALEAAKEIGYPVMLKSTA 159 (1226)
T ss_pred CCCCCCHHHH--HHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 7235787799--89984795787787066744383256899999668898885155877999999986469954798707
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHC--------CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCC-CCCC-CCCEEE
Q ss_conf 675556645446746778987513--------555010111145644332010146654139970533-4543-555058
Q gi|254780158|r 146 LGYDGKGQKVYHENDCTQNLYASL--------GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQ-NTHV-NGILHK 215 (354)
Q Consensus 146 ~GydGkG~~~i~~~~~l~~~~~~~--------~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~e-n~~~-~gil~~ 215 (354)
|| .|.|..++++.+||+++|+.. ++.-+.+|+||+..|+|.|.+-.|..|+++...--- ..|+ |+...+
T Consensus 160 GG-GGIGl~~c~~~~eL~~aFe~Vkrlg~~~F~daGVFlErfv~~ARHvEVQifGDG~G~v~aLGeRDCSLQRRNQKVvE 238 (1226)
T TIGR02712 160 GG-GGIGLQKCDNAAELAEAFETVKRLGESFFGDAGVFLERFVENARHVEVQIFGDGKGKVVALGERDCSLQRRNQKVVE 238 (1226)
T ss_pred CC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEE
T ss_conf 87-65245111898999999999899886323635143403203784289987526973369971167544445665587
Q ss_pred EEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CCEEEEEEECCCCCCCEE-EEHHHCCCCHHHHHHHHHH
Q ss_conf 985278-7878999999998867754024677531045538-840899941257045604-6210013588999999981
Q gi|254780158|r 216 SIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTN-DGNVIANEMAPRVHNSGH-WTEASCVISQFEQHIRSIT 292 (354)
Q Consensus 216 s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~-dg~i~vnEiaPR~Hnsgh-~t~~~~~~sqfe~h~rai~ 292 (354)
-+||+ +|++.++++.+.|.+++++++|.+.-+|||..++ .++.||.|||.|.-= =| +|..=..++--|-+||-..
T Consensus 239 -ETPAP~LP~~~R~~L~~AA~~Lg~~V~YrSAGTVEFiYD~~~d~FYFLEVNTRLQV-EHPvTE~VtGlDLVEWM~r~AA 316 (1226)
T TIGR02712 239 -ETPAPNLPEETRAALLAAAEKLGEAVNYRSAGTVEFIYDEARDEFYFLEVNTRLQV-EHPVTEMVTGLDLVEWMVRIAA 316 (1226)
T ss_pred -ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCC-CCCCEEEEECCHHHHHHHHHHC
T ss_conf -27746864899999999999999971876376047740221087121132341113-3573017846408989999716
Q ss_pred CCCCC
Q ss_conf 88999
Q gi|254780158|r 293 NLPLG 297 (354)
Q Consensus 293 glpl~ 297 (354)
|.+.+
T Consensus 317 g~~p~ 321 (1226)
T TIGR02712 317 GELPD 321 (1226)
T ss_pred CCCCC
T ss_conf 88888
No 35
>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed
Probab=99.97 E-value=1.5e-28 Score=212.12 Aligned_cols=284 Identities=15% Similarity=0.145 Sum_probs=194.7
Q ss_pred CCCCEEEEECCCH---------HHHHHHHHHHHCCCEEEEEECCCCCCH-------HH--CCCEEEEC-CC-------CC
Q ss_conf 9887899980989---------899999999887978999967677713-------42--26827987-89-------99
Q gi|254780158|r 1 MKKKTIGIIGGGQ---------LARMLSMSAARLGFCTVILDPDSNCPA-------NQ--VSNQQIAA-RH-------DD 54 (354)
Q Consensus 1 M~~k~IgIlG~Gq---------L~rml~~aA~~lG~~v~v~d~~~~~pa-------~~--~ad~~~~~-~~-------~D 54 (354)
|.|++|+||-||- .|+....+..+.||+|..+.-+.+.-- .. ..+..... .. ..
T Consensus 1 M~k~kI~Vl~GG~S~EreVSl~Sg~~v~~~L~~~~y~v~~i~i~~~g~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (344)
T PRK01966 1 MMKIRVALLFGGRSAEHEVSLVSAKNILKALDKDKFEVIPIGIDKDGRWYLIDGSNMELNSDDPLRIEEKKSAELLLALP 80 (344)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99768999958788218999999999999761508859999983798877256411110245421012344432223455
Q ss_pred HHHHHHHHHHCCEEEECC-CCC--CHHHHHHHHH-CCCC-CCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHH---H
Q ss_conf 999999974199999877-222--1133344430-2003-487677876315278888876505886743210006---8
Q gi|254780158|r 55 IKALNTFADICDYATYES-ENI--PEKSISYLST-LLPT-YPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQ---E 126 (354)
Q Consensus 55 ~~~l~~~~~~~Dvit~E~-E~i--~~~~l~~l~~-~~~v-~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~---~ 126 (354)
..........+|++-.-. ..- +...-..|+. ++|. .+++.+..+++||..+|.+++++|||||+|..++.. .
T Consensus 81 ~~~~~~~~~~~D~vf~alHG~~GEDG~iQglLe~l~IPYtGs~~~asal~mDK~~tK~i~~~~gI~tp~~~~~~~~~~~~ 160 (344)
T PRK01966 81 GFYEGQLIIEVDVVFPVLHGPPGEDGTIQGLLELLNIPYVGCGVLASAVSMDKILTKRLLAAAGIPQAPYVVLTRSRREE 160 (344)
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH
T ss_conf 32210003567899990689997670999999975999368848999987669999999998799989839981666234
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECC
Q ss_conf 8886410013125540234675556645446746778987513--55501011114564433201014665413997053
Q gi|254780158|r 127 SLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASL--GNVPLILERFTDFNCEISIIAARSLNGSICFYDPI 204 (354)
Q Consensus 127 el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~--~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~ 204 (354)
.+......++||+|+||+.+|++ .|+.++++.+++..+.+.. -+.++++|+||+ ++|++|-+.. .+|...+.|+.
T Consensus 161 ~~~~~~~~l~~P~iVKP~~~GSS-iGvs~v~~~~el~~ai~~a~~~~~~vlvEefI~-GrE~tv~vl~-~~~~~~~l~~~ 237 (344)
T PRK01966 161 AIAEVEEKLGLPVFVKPANLGSS-VGISKVKNEEELEAALDLAFEYDRKVLVEQGIK-GREIECAVLG-YNDEPVASVPG 237 (344)
T ss_pred HHHHHHHHCCCCEEEECCCCCCC-CCEEEECCHHHHHHHHHHHHHCCCCCEEECCCC-CEEEEEEEEC-CCCCEEEECCE
T ss_conf 58999986189879932899634-325996899999999999986397505751244-4899999974-89946773115
Q ss_pred CCCCCCCCE-----------EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEE
Q ss_conf 345435550-----------589852787878999999998867754024677531045538840899941257045604
Q gi|254780158|r 205 QNTHVNGIL-----------HKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGH 273 (354)
Q Consensus 205 en~~~~gil-----------~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh 273 (354)
|-+-.++.| .+.+.||++++++.++++++|.++.++|++.|...|+|++++||++|++|+++=|=-|
T Consensus 238 Ei~~~~~fydy~~KY~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~~lg~rg~~RiDf~~d~~g~~y~lEvNt~PGmT-- 315 (344)
T PRK01966 238 EIVKDNDFYDYEAKYIDDSGATLVIPADLSEELTEQIRELAIKAFKALGCSGLARVDFFLTEDGEIYLNEINTLPGFT-- 315 (344)
T ss_pred EECCCCCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCCC--
T ss_conf 871798751488810468971696678899999999999999999981997279898999089988999820899987--
Q ss_pred EEHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 62100135889999999818899
Q gi|254780158|r 274 WTEASCVISQFEQHIRSITNLPL 296 (354)
Q Consensus 274 ~t~~~~~~sqfe~h~rai~glpl 296 (354)
.+|-|-+.+++. |+..
T Consensus 316 ------~~Sl~p~~a~~~-G~s~ 331 (344)
T PRK01966 316 ------PISMYPKLWEAS-GLSY 331 (344)
T ss_pred ------CCCHHHHHHHHC-CCCH
T ss_conf ------547899999980-9999
No 36
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=99.96 E-value=4.8e-27 Score=201.97 Aligned_cols=307 Identities=15% Similarity=0.220 Sum_probs=212.0
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHH--HCC-CEEEEEECCCCCCHHH---CCCEEEECCCCCHHHHHHHHHH--CCEEEEC
Q ss_conf 9887-8999809898999999998--879-7899996767771342---2682798789999999999741--9999987
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAA--RLG-FCTVILDPDSNCPANQ---VSNQQIAARHDDIKALNTFADI--CDYATYE 71 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~--~lG-~~v~v~d~~~~~pa~~---~ad~~~~~~~~D~~~l~~~~~~--~Dvit~E 71 (354)
|..+ +|+|||+| ||+.|+|-+ +-. +.-+.+.|. .++.. .+ .....+.+|.+++.+|+++ +|.+..-
T Consensus 1 m~~~MkVLviGsG--GREHAia~kl~~S~~v~~v~~aPG--N~G~~~~~~~-~~~~i~~~d~~~i~~fa~~~~idLvvvG 75 (426)
T PRK13789 1 MQVKLKVLLIGSG--GRESAIAFALRKSNLLSELKVFPG--NGGFPDDELL-PADSFSILDKSSVQSFLKSNPFDLIVVG 75 (426)
T ss_pred CCCCCEEEEECCC--HHHHHHHHHHHHCCCCCEEEEECC--CCCCCCCCCC-CCCCCCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 9679889998988--899999999961989887999889--7611234545-4443386699999999998499999989
Q ss_pred CCCC-CHHHHHHH-HHCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 7222-11333444-3020034-8767787631527888887650588674321000688886410013125540234675
Q gi|254780158|r 72 SENI-PEKSISYL-STLLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGY 148 (354)
Q Consensus 72 ~E~i-~~~~l~~l-~~~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~Gy 148 (354)
.|.- ..-..+.+ +.+++++ |+.++.++-.+|...|+|++++|||||+|..+++.+++.+++++.++|+|+|+.-..
T Consensus 76 PE~PL~~Gi~D~l~~~gi~vfGP~k~aA~LE~SK~faK~fm~~~~IPTa~~~~f~~~~~A~~~l~~~~~P~VIKaDGLA- 154 (426)
T PRK13789 76 PEDPLVAGFADWAAELGIPCFGPDSYCAQVEGSKHFAKSLMKEAKIPTASYKTFTEYSSSLSYLESEMLPIVIKADGLA- 154 (426)
T ss_pred CCHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCC-
T ss_conf 6688863179998416991689598995051269899999997299976015736899999999857998899678768-
Q ss_pred CCCCCCCCCCHHHHHHHHHHC--------CCCCEEHHHCCCCCCCCCCEECCCCCCC-EEEEECCCCCCC--CCCE----
Q ss_conf 556645446746778987513--------5550101111456443320101466541-399705334543--5550----
Q gi|254780158|r 149 DGKGQKVYHENDCTQNLYASL--------GNVPLILERFTDFNCEISIIAARSLNGS-ICFYDPIQNTHV--NGIL---- 213 (354)
Q Consensus 149 dGkG~~~i~~~~~l~~~~~~~--------~~~~~iiEe~I~~~~Eisviv~r~~~G~-~~~~p~~en~~~--~gil---- 213 (354)
.|||+.+..+.++...+...+ .+..+++|||+. +.|+|+++.. +|+ +..+|+++.+-+ +|+.
T Consensus 155 aGKGV~V~~~~~eA~~al~~i~~~~~fg~ag~~VvIEE~L~-G~E~S~~a~~--dG~~~~~lp~aQDhKR~~dgD~GPNT 231 (426)
T PRK13789 155 AGKGVTVATEKKMAKRALKEIFKDKKFGQSGNQVVIEEFME-GQEASIFAIS--DGDSYFLLPAAQDHKRAFDGDQGPNT 231 (426)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC-CCCEEEEEEE--CCCEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99966953999999999999754423303587599997458-9844799997--29977868864444213379999999
Q ss_pred --EEEEECCC-CCHHHHHHHHH-HHHHHHHHCC-----CCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHH
Q ss_conf --58985278-78789999999-9886775402-----467753104553884089994125704560462100135889
Q gi|254780158|r 214 --HKSIVPAS-ISQKTSLLAHS-AMRKVLETLD-----YVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQF 284 (354)
Q Consensus 214 --~~s~~Pa~-i~~~~~~~a~~-~a~~i~~~L~-----~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqf 284 (354)
.-+++|++ +++++.+++.+ +...+++.|. |+|++.+.|++|+||+.+|.|.+-|--+----.+-..--|.|
T Consensus 232 GGMGaysP~p~~~~~~~~~i~~~ii~pt~~~l~~~g~~y~GvLy~GlMlt~~G~pkVlEfN~RfGDPE~q~iLp~L~~dl 311 (426)
T PRK13789 232 GGMGAYCPAPVITEAILQKVKERIFDPMFDDFRKKGHPYRGLLYAGLMISPEGEPKVVEFNCRFGDPETQCVLAMLDGDL 311 (426)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHCCH
T ss_conf 98767777866899999999986048999999858999886765328992699769999885318916888988741549
Q ss_pred HHHHHHHHCCCCC--CCHHCCCEEEEEEEC-CCCC
Q ss_conf 9999998188999--700048567999755-7702
Q gi|254780158|r 285 EQHIRSITNLPLG--NPNRHSNCVMYNIIG-SDID 316 (354)
Q Consensus 285 e~h~rai~glpl~--~~~~~~~~~m~nilg-~~~~ 316 (354)
-..+-+++.--|. +......+.+..++. ..|+
T Consensus 312 ~~~~~a~~~g~L~~~~~~~~~~~~v~vvlas~GYP 346 (426)
T PRK13789 312 LELLYAASTGKIKVVNLKLKQGAAAVVVLAAQGYP 346 (426)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC
T ss_conf 99999997088664544302674069997468899
No 37
>TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase; InterPro: IPR005905 D-alanine--D-alanine ligase (6.3.2.4 from EC) is a bacterial enzyme involved in cell-wall biosynthesis. It participates in forming UDP-N-acetylmuramoyl pentapeptide, the peptidoglycan precursor. These enzymes are proteins of 300 to 360 amino acids containing many conserved regions. The N-terminal Gly-rich region could be involved in ATP-binding. This family of enzymes represent chromosomal versions of species not specifically resistant to glycopeptide antibiotics such as vancomycin. The mechanism of glycopeptide antibiotic resistance involves the production of D-alanine-D-lactate (VanA and VanB families) or D-alanine-D-serine (VanC). This model attempts to exclude the VanA/VanB and VanC subfamilies while capturing most other D-Ala-D-Ala ligases above the trusted cut-off. However, changes in small numbers of amino acids, as demonstrated crystallographically, can alter specificity. In chlamydial species, this enzyme is found as a fusion protein with UDP-N-acetylmuramate--alanine ligase. ; GO: 0008716 D-alanine-D-alanine ligase activity, 0009252 peptidoglycan biosynthetic process, 0005737 cytoplasm.
Probab=99.96 E-value=2.5e-27 Score=203.84 Aligned_cols=265 Identities=18% Similarity=0.205 Sum_probs=182.5
Q ss_pred EEEEECCCH---------HHHHHHHHHHHC--------CCEEEEEECCCCC----------------CHHHC-CCEE-EE
Q ss_conf 899980989---------899999999887--------9789999676777----------------13422-6827-98
Q gi|254780158|r 5 TIGIIGGGQ---------LARMLSMSAARL--------GFCTVILDPDSNC----------------PANQV-SNQQ-IA 49 (354)
Q Consensus 5 ~IgIlG~Gq---------L~rml~~aA~~l--------G~~v~v~d~~~~~----------------pa~~~-ad~~-~~ 49 (354)
||++|=||. .|+.+..|.+++ ||+|+.+|.++.. ....+ -... +.
T Consensus 1 ~v~vL~GG~S~EhEiSL~Sa~~v~~aL~~~~~FIF~deg~~v~~~~~~~~g~w~~~~~~~~~L~~~~~~~~~~~~~~~~~ 80 (375)
T TIGR01205 1 RVAVLFGGKSAEHEISLVSAQAVLKALRSLLEFIFLDEGYDVYPVDIDKQGSWVFSDAKTEALVYKDLLQKLLEQGGPIN 80 (375)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHCCCCEE
T ss_conf 97897368765056758999999998652087665316648999862267733003456555211100467763589740
Q ss_pred CCCCCHH-HH----------HHHHHHCCEEEECCCCCC-H---HHHHHHHH--CCCC-CCCHHHHHHHHCCHHHHHHHHH
Q ss_conf 7899999-99----------999741999998772221-1---33344430--2003-4876778763152788888765
Q gi|254780158|r 50 ARHDDIK-AL----------NTFADICDYATYESENIP-E---KSISYLST--LLPT-YPSSRAIEISQDRLYEKKFFQE 111 (354)
Q Consensus 50 ~~~~D~~-~l----------~~~~~~~Dvit~E~E~i~-~---~~l~~l~~--~~~v-~P~~~al~~~~dK~~~K~~l~~ 111 (354)
.+..+.. .+ .+-...+|++-.-. |-+ . -+++-|=+ ++|. .|+.-|-.+++||..+|.++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vF~~L-HG~~~GEDGtiQGlLe~~gIPY~Gsgv~aSA~smDK~~tK~~~~~ 159 (375)
T TIGR01205 81 LSSLAQVSLLGESFLLEAESAEALEEIDVVFPVL-HGPPYGEDGTIQGLLELLGIPYTGSGVLASALSMDKLLTKLLLKS 159 (375)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEE-CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 1466741003556666644530204798899812-185668555289999970787037478999987428999999987
Q ss_pred CCCCCCCCCCC--CHHHHH-----H--HHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCEEHHHC-
Q ss_conf 05886743210--006888-----8--6410013125540234675556645446746778987513--5550101111-
Q gi|254780158|r 112 SGLTTVDFYEI--NSQESL-----T--NILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASL--GNVPLILERF- 179 (354)
Q Consensus 112 ~gipt~~~~~v--~s~~el-----~--~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~--~~~~~iiEe~- 179 (354)
+|||+|+|..+ .+.... . ...+.+|||+||||++.||| -|+.++.+.++++.+++.. -+.++|||+|
T Consensus 160 ~Glp~~~y~~l~~~~~~~~~~~~~~~~~~~~~lg~P~~VKPa~~GSS-vG~~~V~~~~eL~~a~~~Af~~d~~v~vE~~~ 238 (375)
T TIGR01205 160 LGLPTPDYAVLRRKERSSEDEAECENVAVLEKLGFPVFVKPAREGSS-VGISKVKSEEELEAALDEAFKYDERVIVEEFK 238 (375)
T ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCE-EEEEEECCHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 57974470467504544561346899999983689789973467775-77898467789999999861559659998111
Q ss_pred --CCCCCCCCCEECCCCC--------CCEE------EEECCCCCCCCCCEEEEEECCC--CCHHHHHHHHHHHHHHHHHC
Q ss_conf --4564433201014665--------4139------9705334543555058985278--78789999999988677540
Q gi|254780158|r 180 --TDFNCEISIIAARSLN--------GSIC------FYDPIQNTHVNGILHKSIVPAS--ISQKTSLLAHSAMRKVLETL 241 (354)
Q Consensus 180 --I~~~~Eisviv~r~~~--------G~~~------~~p~~en~~~~gil~~s~~Pa~--i~~~~~~~a~~~a~~i~~~L 241 (354)
|. +||++|-+-.+.+ ++.. ||+--+ -+.++.-.....||+ ++++..++++++|.|+.++|
T Consensus 239 ~~i~-grEl~v~~L~~~~~lp~~~~~~~~~~~g~~~FYDY~~-KY~~~~g~~~~~pa~~~L~~~~~~~i~~~a~~ay~~~ 316 (375)
T TIGR01205 239 QRIK-GRELEVSILGNEEALPIISIVPEIEPDGGSDFYDYEA-KYLDGDGTEYVIPAPAGLDEELEEKIKELALKAYKAL 316 (375)
T ss_pred CCCC-CCEEEEEEEECCCCCEEEECCCCCCCCCCCEECCHHH-CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 4789-8526898870797432454067535676760000211-4277887326515656788899999999999999840
Q ss_pred CCCCCCCCEEEECCC-CEEEEEEECCCCCCCEE
Q ss_conf 246775310455388-40899941257045604
Q gi|254780158|r 242 DYVGILCIEFFVTND-GNVIANEMAPRVHNSGH 273 (354)
Q Consensus 242 ~~~Gv~~VEffv~~d-g~i~vnEiaPR~Hnsgh 273 (354)
++.|.-.||||++++ |++|+|||+|=|=-|-|
T Consensus 317 ~~~G~~R~DFf~~~~~G~~yLnEiNT~PGmT~~ 349 (375)
T TIGR01205 317 GCRGLARVDFFLDKETGEIYLNEINTIPGMTAI 349 (375)
T ss_pred CCCCEEEEEEEEECCCCEEEEEEECCCCCCCCH
T ss_conf 887448998998728886999987688887201
No 38
>pfam07478 Dala_Dala_lig_C D-ala D-ala ligase C-terminus. This family represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme EC:6.3.2.4. D-Alanine is one of the central molecules of the cross-linking step of peptidoglycan assembly. There are three enzymes involved in the D-alanine branch of peptidoglycan biosynthesis: the pyridoxal phosphate-dependent D-alanine racemase (Alr), the ATP-dependent D-alanine:D-alanine ligase (Ddl), and the ATP-dependent D-alanine:D-alanine-adding enzyme (MurF).
Probab=99.95 E-value=1.2e-27 Score=206.05 Aligned_cols=177 Identities=16% Similarity=0.234 Sum_probs=145.9
Q ss_pred HHHHCCCCCCCCCCCCHHH----HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCC--CCCEEHHHCCC
Q ss_conf 8765058867432100068----88864100131255402346755566454467467789875135--55010111145
Q gi|254780158|r 108 FFQESGLTTVDFYEINSQE----SLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASLG--NVPLILERFTD 181 (354)
Q Consensus 108 ~l~~~gipt~~~~~v~s~~----el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~~--~~~~iiEe~I~ 181 (354)
+|+++|||||+|..+.+.+ ++.++.+++|||+|+||+.+| +|+|+.++++.+++..++.... +.++++|+||+
T Consensus 1 ll~~~Giptp~~~~v~~~~~~~~~~~~i~~~lg~P~vvKP~~~g-ss~Gv~~v~~~~el~~~i~~~~~~~~~vlVEefi~ 79 (201)
T pfam07478 1 LLKAAGIPVAPFIVLTREDWVLATIEKVEEKLGYPVFVKPANLG-SSVGISKVTSREELQSAIEEAFQYDNKVLIEEAIE 79 (201)
T ss_pred CHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCC-CCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 95565999999089825323435799999865998899989999-86687999584687999999874598079998566
Q ss_pred CCCCCCCEECCCCCCCEEEEECCCCCCCCCCEE----------EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 644332010146654139970533454355505----------8985278787899999999886775402467753104
Q gi|254780158|r 182 FNCEISIIAARSLNGSICFYDPIQNTHVNGILH----------KSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEF 251 (354)
Q Consensus 182 ~~~Eisviv~r~~~G~~~~~p~~en~~~~gil~----------~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEf 251 (354)
++|++|.+.++ |+..++|+.|....+++++ ..+.|+++++++.++++++|.+++++||+.|+.+|||
T Consensus 80 -G~E~~v~vl~~--~~~~~~~~~e~~~~~~~~~~~~k~~~~~~~~~~Pa~l~~~~~~~i~~~A~~~~~aLg~~g~~rvD~ 156 (201)
T pfam07478 80 -GREIECAVLGN--EDLEVSPVGEIRLSGGFYDYEAKYILSSAQIIVPADLPEEVEEQIQELALKAYKALGCRGLARIDF 156 (201)
T ss_pred -CCEEEEEEEEC--CCEEEEEEEEEECCCCEEEHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf -96799999708--980898758994377502676801368723761566859999999999999999848876057999
Q ss_pred EECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf 5538840899941257045604621001358899999998188999
Q gi|254780158|r 252 FVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLG 297 (354)
Q Consensus 252 fv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~ 297 (354)
|+++||++||+|++|+|--| ..|-|-...+ ..|++..
T Consensus 157 ~~d~~g~~~vlEvN~~Pg~~--------~~s~~~~~a~-~~G~sy~ 193 (201)
T pfam07478 157 FLTEDGEIYLNEVNTMPGFT--------SISLYPRMWA-AAGLSYP 193 (201)
T ss_pred EECCCCCEEEEEECCCCCCC--------CCCHHHHHHH-HCCCCHH
T ss_conf 99689949999954979998--------6769999999-8199999
No 39
>TIGR00877 purD phosphoribosylamine--glycine ligase; InterPro: IPR000115 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) catalyzes the second step in the de novo biosynthesis of purine: ATP + 5-phosphoribosylamine + glycine = ADP + P_i + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART.; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process.
Probab=99.95 E-value=2.7e-26 Score=196.93 Aligned_cols=302 Identities=18% Similarity=0.259 Sum_probs=217.1
Q ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCHHHCCC--EEEECCCC----CHHHHHHHHHH--CCEEEECCCC
Q ss_conf 899980989899999999887--97899996767771342268--27987899----99999999741--9999987722
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARL--GFCTVILDPDSNCPANQVSN--QQIAARHD----DIKALNTFADI--CDYATYESEN 74 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~l--G~~v~v~d~~~~~pa~~~ad--~~~~~~~~----D~~~l~~~~~~--~Dvit~E~E~ 74 (354)
+|+|||+| ||+.++| ++| .=.|.-+--.+.+++....+ ..+-.+.+ |.++|.+||+. +|.+..=.|.
T Consensus 2 kVLviG~G--GREHAla-~~l~qs~~v~~~~~apGN~Gta~~~~~~~~~~~~~~~~~d~~~~~~FA~~~~idL~~iGPE~ 78 (459)
T TIGR00877 2 KVLVIGNG--GREHALA-WKLAQSPLVKYVYVAPGNAGTARLAKNKNVAIEITKDVRDIEALVEFAKKKKIDLAVIGPEA 78 (459)
T ss_pred EEEEECCC--HHHHHHH-HHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 58997487--0589999-98732711336678268986220125444114578663008999999984697548808741
Q ss_pred -CCHHHHHHHH-HCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHCCCCE--EEEECCCCCC
Q ss_conf -2113334443-020034-8767787631527888887650588-67432100068888641001312--5540234675
Q gi|254780158|r 75 -IPEKSISYLS-TLLPTY-PSSRAIEISQDRLYEKKFFQESGLT-TVDFYEINSQESLTNILGGFKGK--GILKTRRLGY 148 (354)
Q Consensus 75 -i~~~~l~~l~-~~~~v~-P~~~al~~~~dK~~~K~~l~~~gip-t~~~~~v~s~~el~~~~~~~g~P--~vlKp~~~Gy 148 (354)
+-.-..+.|+ .+++++ |+.+|+++-.+|..+|+||+++||| |+.|..+++.+++.+++++.+.| +|+|+..+..
T Consensus 79 PL~~G~vd~le~~Gi~~FGP~k~AA~LE~SK~FaK~fm~~~gIPGta~Y~~Ft~~eea~~y~~~~g~PA~~VVKadGLAA 158 (459)
T TIGR00877 79 PLVLGLVDALEEAGIPVFGPTKEAAQLEASKAFAKDFMKRYGIPGTAEYEVFTDPEEAKSYIQEKGAPAEIVVKADGLAA 158 (459)
T ss_pred CHHHHHHHHHHHCCCCEECCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 01201477898679514568878864332878999999964898322210008989999999841889748980566657
Q ss_pred CCCCCCCC----CCHHHHHHHHHHC--------CCCCEEHHHCCCCCCCCCCEECCCCCCCEEE-EECCCCCCC----CC
Q ss_conf 55664544----6746778987513--------5550101111456443320101466541399-705334543----55
Q gi|254780158|r 149 DGKGQKVY----HENDCTQNLYASL--------GNVPLILERFTDFNCEISIIAARSLNGSICF-YDPIQNTHV----NG 211 (354)
Q Consensus 149 dGkG~~~i----~~~~~l~~~~~~~--------~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~-~p~~en~~~----~g 211 (354)
|||+.++ .+.++...+.+.+ .+.+++||||++ +-|+|+++.. ||+.++ .|+++++-+ |.
T Consensus 159 -GKGV~V~Ge~L~~~eEA~~~~~~~~~~~~FG~a~~~VVIEEfL~-G~E~S~~~~~--DG~~v~Plp~aQDhKR~~egD~ 234 (459)
T TIGR00877 159 -GKGVIVAGEQLKTNEEAIKAVEEILEQKAFGEAGERVVIEEFLE-GEEVSLLAFV--DGKTVIPLPPAQDHKRALEGDK 234 (459)
T ss_pred -CCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC-CCCEEEEEEE--CCCEEEECCCCCCCCCCCCCCC
T ss_conf -98626847602747899999999985476566688258964248-8008999997--4866770542157650466888
Q ss_pred -CEE----EEEECCC----CCHHHHHH-HHHHHHHHHHHCC-----CCCCCCCEEEECCCCE---EEEEEECCCCCCCEE
Q ss_conf -505----8985278----78789999-9999886775402-----4677531045538840---899941257045604
Q gi|254780158|r 212 -ILH----KSIVPAS----ISQKTSLL-AHSAMRKVLETLD-----YVGILCIEFFVTNDGN---VIANEMAPRVHNSGH 273 (354)
Q Consensus 212 -il~----~s~~Pa~----i~~~~~~~-a~~~a~~i~~~L~-----~~Gv~~VEffv~~dg~---i~vnEiaPR~Hnsgh 273 (354)
-+. -+++|++ +++++.++ ..++.+.++++|. |+|||.-.|+++++|+ -.|.|.+-|==+=.=
T Consensus 235 ~GpNTGGMGAYsP~phlL~~~~e~~~~~~~~I~~pt~~~l~~eG~~y~GvLYaglMl~~~G~~L~PkVlEfN~RFGDPEt 314 (459)
T TIGR00877 235 KGPNTGGMGAYSPAPHLLVFTEEVEKRIAEEIVEPTVKALRKEGTPYKGVLYAGLMLTKEGGVLVPKVLEFNVRFGDPET 314 (459)
T ss_pred CCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCCHHH
T ss_conf 78855786330278784423717899998777899999998528972478741389976898864478897052788534
Q ss_pred EEHHHCCC--CHHHHHHHHHHCCCCC----CCHHCCCEEEEEEECC
Q ss_conf 62100135--8899999998188999----7000485679997557
Q gi|254780158|r 274 WTEASCVI--SQFEQHIRSITNLPLG----NPNRHSNCVMYNIIGS 313 (354)
Q Consensus 274 ~t~~~~~~--sqfe~h~rai~glpl~----~~~~~~~~~m~nilg~ 313 (354)
-.+-.--- |-+.+-+.|++.=.|- +.+....+++-.++-.
T Consensus 315 q~vL~lL~dqsdL~e~~~a~~eg~L~d~~~~~~~~~~~av~VvlA~ 360 (459)
T TIGR00877 315 QAVLPLLKDQSDLLEVCLAAVEGKLDDSEVELRFDNRAAVTVVLAS 360 (459)
T ss_pred HHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEC
T ss_conf 4464542388888999999845666564112488178359999804
No 40
>PRK00885 phosphoribosylamine--glycine ligase; Provisional
Probab=99.95 E-value=2.4e-25 Score=190.54 Aligned_cols=303 Identities=17% Similarity=0.233 Sum_probs=212.7
Q ss_pred EEEEECCCHHHHHHHHHHH--HCC-CEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH--CCEEEECCCCC-CHH
Q ss_conf 8999809898999999998--879-78999967677713422682798789999999999741--99999877222-113
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAA--RLG-FCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI--CDYATYESENI-PEK 78 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~--~lG-~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~--~Dvit~E~E~i-~~~ 78 (354)
+|+|||+| ||+.|++-+ +-. +.-+.+.| ..|+..--...+..+.+|.+.+.+|+++ +|.+..-.|.- ..-
T Consensus 2 kVLviGsG--gREHAia~kl~~s~~v~~v~~~P--GN~G~~~~~~~~~i~~~d~~~l~~~a~~~~idlviiGPE~pL~~G 77 (424)
T PRK00885 2 KVLVIGSG--GREHALAWKLAQSPLVEKVYVAP--GNAGTALEAENVAIDVTDIEALVAFAKEEGIDLTVVGPEAPLVAG 77 (424)
T ss_pred EEEEECCC--HHHHHHHHHHHHCCCCCEEEEEC--CCHHHHHCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHH
T ss_conf 79998888--89999999997397989899928--975887417365128579999999999849999998966788735
Q ss_pred HHHHHH-HCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 334443-020034-876778763152788888765058867432100068888641001312554023467555664544
Q gi|254780158|r 79 SISYLS-TLLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVY 156 (354)
Q Consensus 79 ~l~~l~-~~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i 156 (354)
..+.++ .+++++ |+.+++++-.+|..+|+|+++++|||+.|..+++.+++.+++++.++|+|+|+.... .|||+.+.
T Consensus 78 i~D~l~~~gi~vfGP~k~aA~lE~SK~faK~~m~~~~IPTa~~~~f~~~~~A~~~l~~~~~p~VIKaDGLA-aGKGV~V~ 156 (424)
T PRK00885 78 IVDAFRAAGLKIFGPTKAAAQLEGSKAFAKDFMARYGIPTAAYEVFTDAEEAKAYLDEQGAPIVVKADGLA-AGKGVVVA 156 (424)
T ss_pred HHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCCC-CCCCEEEE
T ss_conf 79999506994689497898876637999999998298987548868999999999857998899617656-77751763
Q ss_pred CCHHHHHHHHHHC------C--CCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCC--CCCE------EEEEECC
Q ss_conf 6746778987513------5--550101111456443320101466541399705334543--5550------5898527
Q gi|254780158|r 157 HENDCTQNLYASL------G--NVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHV--NGIL------HKSIVPA 220 (354)
Q Consensus 157 ~~~~~l~~~~~~~------~--~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~--~gil------~~s~~Pa 220 (354)
.+.++...+...+ + +..+++|||+. +.|+|+++..|.+ ++..+|+++.+-+ +|+. .-+++|+
T Consensus 157 ~~~~ea~~al~~i~~~~~fg~ag~~VvIEE~L~-G~E~S~~a~~DG~-~~~~lp~aqDhKR~~dgD~GPNTGGMGa~sP~ 234 (424)
T PRK00885 157 MTLEEAEAAVDDMLAGNKFGDAGARVVIEEFLD-GEEASFFALVDGE-NVLPLPTAQDHKRAGDGDTGPNTGGMGAYSPA 234 (424)
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC-CCEEEEEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 789999999999850332345687289997058-8317999997899-72647021147505689999889988566788
Q ss_pred C-CCHHHHHHH-HHHHHHHHHHC-----CCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHH-HCCCCHHHHHHHHHH
Q ss_conf 8-787899999-99988677540-----246775310455388408999412570456046210-013588999999981
Q gi|254780158|r 221 S-ISQKTSLLA-HSAMRKVLETL-----DYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEA-SCVISQFEQHIRSIT 292 (354)
Q Consensus 221 ~-i~~~~~~~a-~~~a~~i~~~L-----~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~-~~~~sqfe~h~rai~ 292 (354)
+ ++++..+++ .++...++++| .|.|++.+.|++|.|| .+|.|.+-|.-+-=--.+- -..++-++....++-
T Consensus 235 p~~~~~~~~~i~~~Ii~pt~~~l~~eg~~y~GiLy~GlMit~~G-pkVlEyN~RfGDPE~qvllp~L~~dl~~l~~~~~~ 313 (424)
T PRK00885 235 PVVTEEVHDRVMEEIIEPTVKGMAAEGIPYTGVLYAGLMITKDG-PKVIEFNCRFGDPETQVVLPRLKSDLVELLLAAAE 313 (424)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCC-CEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 67999999999998799999999857984799987799986797-55898631348858889987523619999998753
Q ss_pred CCCCCCC--HHCCC-EEEEEEECCCCC
Q ss_conf 8899970--00485-679997557702
Q gi|254780158|r 293 NLPLGNP--NRHSN-CVMYNIIGSDID 316 (354)
Q Consensus 293 glpl~~~--~~~~~-~~m~nilg~~~~ 316 (354)
| .|.+. +.... ++-+.+....|+
T Consensus 314 g-~L~~~~~~~~~~~~v~Vvlas~GYP 339 (424)
T PRK00885 314 G-KLDEVPLEWDDRAAVGVVLAAKGYP 339 (424)
T ss_pred C-CCCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 9-8554553334783379999169889
No 41
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=99.95 E-value=3.8e-25 Score=189.20 Aligned_cols=302 Identities=17% Similarity=0.267 Sum_probs=208.5
Q ss_pred EEEEECCCHHHHHHHHH--HHHCC-CEEEEEECCCCCCH-HHCCCEEEECCCCCHHHHHHHHHH--CCEEEECCCC-CCH
Q ss_conf 89998098989999999--98879-78999967677713-422682798789999999999741--9999987722-211
Q gi|254780158|r 5 TIGIIGGGQLARMLSMS--AARLG-FCTVILDPDSNCPA-NQVSNQQIAARHDDIKALNTFADI--CDYATYESEN-IPE 77 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~a--A~~lG-~~v~v~d~~~~~pa-~~~ad~~~~~~~~D~~~l~~~~~~--~Dvit~E~E~-i~~ 77 (354)
+|+|||+| ||+.|++ .++-. +.-+.+.|. .|+ .+.+......+.+|.+++.+|+++ +|.+..-.|. +..
T Consensus 2 kVLviGsG--gREHAla~~l~~s~~v~~v~~aPG--N~g~~~~a~~~~~i~~~d~~~i~~~a~~~~iDLvvvGPE~PL~~ 77 (415)
T PRK13790 2 NVLVIGAG--GREHALAYKLNQSNLVKQVFVIPG--NEAMTPIAEVHTEISESDHQAILDFAKQQNVDWVVIGPEQPLID 77 (415)
T ss_pred EEEEECCC--HHHHHHHHHHHHCCCCCEEEEECC--CHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHH
T ss_conf 79998878--899999999962989898999789--55765223024676855899999999981999999896078663
Q ss_pred HHHHHHH-HCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 3334443-020034-87677876315278888876505886743210006888864100131255402346755566454
Q gi|254780158|r 78 KSISYLS-TLLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKV 155 (354)
Q Consensus 78 ~~l~~l~-~~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~ 155 (354)
-..+.++ .+++++ |+.++.++-.+|...|+|++++||||++|..+++.+++.++++++++|+|+|+.-.. .|||+.+
T Consensus 78 GivD~l~~~gi~vfGP~k~aA~LE~SK~faK~~m~~~~IPTa~~~~f~~~~~A~~~l~~~~~p~VIKaDGLA-aGKGV~V 156 (415)
T PRK13790 78 GLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLA-AGKGVII 156 (415)
T ss_pred HHHHHHHCCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCCC-CCCCEEE
T ss_conf 488886438975989497995151269999999998297977725508799999998617998899668667-8995699
Q ss_pred CCCHHHHHHHHHHC----CCCCEEHHHCCCCCCCCCCEECCCCCCCEEE-EECCCCCCC---CCCE------EEEEECCC
Q ss_conf 46746778987513----5550101111456443320101466541399-705334543---5550------58985278
Q gi|254780158|r 156 YHENDCTQNLYASL----GNVPLILERFTDFNCEISIIAARSLNGSICF-YDPIQNTHV---NGIL------HKSIVPAS 221 (354)
Q Consensus 156 i~~~~~l~~~~~~~----~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~-~p~~en~~~---~gil------~~s~~Pa~ 221 (354)
..+.++...+.+.+ ..+.+++|||+. +.|+|+++.. ||+..+ +|++-..|+ +|+. .-+++|++
T Consensus 157 ~~~~~eA~~al~~i~~~~~~g~VvIEE~L~-G~E~S~~a~~--DG~~~~p~~~~aQDhKR~~dgD~GPNTGGMGaysp~p 233 (415)
T PRK13790 157 ADTIEAARSAIEIMYGDEEEGTVVFETFLE-GEEFSLMTFV--NGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVP 233 (415)
T ss_pred ECCHHHHHHHHHHHHCCCCCCEEEEEEECC-CCCEEEEEEE--CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 799999999999985555476599987157-8634899997--3997995775432120246899999999875667774
Q ss_pred -CCHHHHHHHH-HHHHHHHHHC-----CCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEH-HHCCCCHHHHHHHHHHC
Q ss_conf -7878999999-9988677540-----24677531045538840899941257045604621-00135889999999818
Q gi|254780158|r 222 -ISQKTSLLAH-SAMRKVLETL-----DYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTE-ASCVISQFEQHIRSITN 293 (354)
Q Consensus 222 -i~~~~~~~a~-~~a~~i~~~L-----~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~-~~~~~sqfe~h~rai~g 293 (354)
++++..+++. ++...++++| .|.|++.+.|++|++| .+|.|.+-|--+----.+ --...+-++..+.+.-|
T Consensus 234 ~~~~~~~~~~~~~I~~p~~~~l~~eg~~y~GvLy~GlMlt~~G-pkVlEyN~RfGDPE~q~iLp~L~~Dl~~~~~~~~~g 312 (415)
T PRK13790 234 HISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDG-PKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEG 312 (415)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCC-CEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf 4698999999987089999999855998489988779986898-669998741189228889876055199999999759
Q ss_pred CCCCCCHHCCC-EEEEEEECCCCC
Q ss_conf 89997000485-679997557702
Q gi|254780158|r 294 LPLGNPNRHSN-CVMYNIIGSDID 316 (354)
Q Consensus 294 lpl~~~~~~~~-~~m~nilg~~~~ 316 (354)
...+.+.... ++-+.+....|+
T Consensus 313 -~~~~~~~~~~~~v~vvlas~GYP 335 (415)
T PRK13790 313 -KRTEFKWKNESIVGVMLASKGYP 335 (415)
T ss_pred -CCCCEEECCCCEEEEEECCCCCC
T ss_conf -98715763783699996458899
No 42
>COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism]
Probab=99.94 E-value=8.1e-25 Score=186.96 Aligned_cols=303 Identities=17% Similarity=0.256 Sum_probs=214.1
Q ss_pred EEEEECCCHHHHHHHHH--HHHCCCEEEEEECCCCCCHHHCCCEEEECCC-CCHHHHHHHHHH--CCEEEECCCC-CCHH
Q ss_conf 89998098989999999--9887978999967677713422682798789-999999999741--9999987722-2113
Q gi|254780158|r 5 TIGIIGGGQLARMLSMS--AARLGFCTVILDPDSNCPANQVSNQQIAARH-DDIKALNTFADI--CDYATYESEN-IPEK 78 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~a--A~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~-~D~~~l~~~~~~--~Dvit~E~E~-i~~~ 78 (354)
+|+|||+| ||+.++| ..+-+....++. .+.+|+....+.....+. +|.+.|.+|++. +|.+..-.|. +-.-
T Consensus 2 kVLviGsG--GREHAiA~kla~s~~v~~~~~-apgN~G~a~~~~~~~~~~~~~~~~lv~fA~~~~idl~vVGPE~pL~~G 78 (428)
T COG0151 2 KVLVIGSG--GREHALAWKLAQSPLVLYVYV-APGNPGTALEAYLVNIEIDTDHEALVAFAKEKNVDLVVVGPEAPLVAG 78 (428)
T ss_pred EEEEECCC--CHHHHHHHHHHCCCCEEEEEE-ECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHH
T ss_conf 49998688--169999999840876249999-379974211344336765558899999999739998998971787644
Q ss_pred HHHHH-HHCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 33444-3020034-876778763152788888765058867432100068888641001312554023467555664544
Q gi|254780158|r 79 SISYL-STLLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVY 156 (354)
Q Consensus 79 ~l~~l-~~~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i 156 (354)
..+.+ +.+++++ |+..+.++-.+|..+|+|++++||||+.|..+++.+++.+++++.|.|+|+|+..+. .|||+.+.
T Consensus 79 vvD~l~~~Gi~vFGPsk~AA~lE~SK~faK~fm~k~~IPta~y~~f~~~e~a~ayi~~~g~piVVKadGLa-aGKGV~V~ 157 (428)
T COG0151 79 VVDALRAAGIPVFGPTKAAAQLEGSKAFAKDFMKKYGIPTAEYEVFTDPEEAKAYIDEKGAPIVVKADGLA-AGKGVIVA 157 (428)
T ss_pred HHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCEEEECCCCC-CCCCEEEC
T ss_conf 68999877996238678898877539999999998199964111008989999999972998899345446-78985982
Q ss_pred CCHHHHHHHHHHC------C--CCCEEHHHCCCCCCCCCCEECCCCCCC-EEEEECCCCCCC--CCCE------EEEEEC
Q ss_conf 6746778987513------5--550101111456443320101466541-399705334543--5550------589852
Q gi|254780158|r 157 HENDCTQNLYASL------G--NVPLILERFTDFNCEISIIAARSLNGS-ICFYDPIQNTHV--NGIL------HKSIVP 219 (354)
Q Consensus 157 ~~~~~l~~~~~~~------~--~~~~iiEe~I~~~~Eisviv~r~~~G~-~~~~p~~en~~~--~gil------~~s~~P 219 (354)
.+.++..++...+ + ...+++|||++ +-|+|+++.. ||+ +..+|+++.+-+ +|+. .-+++|
T Consensus 158 ~~~eeA~~a~~~~l~~~~fg~~g~~VVIEEfL~-GeE~S~~a~~--DG~~v~p~p~aQDhKra~dgD~GPNTGGMGaysp 234 (428)
T COG0151 158 MTLEEAEAAVDEMLEGNAFGSAGARVVIEEFLD-GEEFSLQAFV--DGKTVIPMPTAQDHKRAYDGDTGPNTGGMGAYSP 234 (428)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC-CEEEEEEEEE--CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 779999999999974000147887489985334-6179999997--6986787853145643348998998888777779
Q ss_pred CC-CCHHHHHHHH-HHHHHHHHHCC-----CCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHH
Q ss_conf 78-7878999999-99886775402-----46775310455388408999412570456046210013588999999981
Q gi|254780158|r 220 AS-ISQKTSLLAH-SAMRKVLETLD-----YVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSIT 292 (354)
Q Consensus 220 a~-i~~~~~~~a~-~~a~~i~~~L~-----~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~ 292 (354)
++ +++++.+++. ++....+++|. |+|+|...|++|++| .+|.|.+-|--+----.+-.---|-|.+++-+++
T Consensus 235 ~P~~t~e~~~~~~~~Iv~ptv~gm~~EG~~f~GvLy~glMlt~~G-PkViEfN~RFGDPEtq~vL~~l~sdl~~~~~a~~ 313 (428)
T COG0151 235 APFITDEVVERAVEEIVEPTVEGMAKEGYPFRGVLYAGLMLTADG-PKVIEFNARFGDPETQVVLPLLESDLVELLLAAV 313 (428)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCC-CEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 887998999999999999999999971898147887678982899-6799985666883577778760260999999997
Q ss_pred CCCCCCCHH---CC-CEEEEEEECCCC
Q ss_conf 889997000---48-567999755770
Q gi|254780158|r 293 NLPLGNPNR---HS-NCVMYNIIGSDI 315 (354)
Q Consensus 293 glpl~~~~~---~~-~~~m~nilg~~~ 315 (354)
.=.|-++.. .. .++-+.+.-..|
T Consensus 314 ~g~L~~~~~~~~~~~a~v~vvlA~~GY 340 (428)
T COG0151 314 DGKLDEVEILFWDKGAAVGVVLAAEGY 340 (428)
T ss_pred HCCCCCCCHHHCCCCCEEEEEEECCCC
T ss_conf 187556442221578569999905888
No 43
>KOG0369 consensus
Probab=99.94 E-value=2.9e-24 Score=183.27 Aligned_cols=302 Identities=18% Similarity=0.205 Sum_probs=242.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEEC--------CCCCHHHHHHHHHH--CCEEEE
Q ss_conf 87899980989899999999887978999967677713--4226827987--------89999999999741--999998
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAA--------RHDDIKALNTFADI--CDYATY 70 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~--------~~~D~~~l~~~~~~--~Dvit~ 70 (354)
+++|++---|+.+--.-.+|.+|+.+++++.+..|--. .+.||+.|.+ .|...+.+.+.+++ +|+|-+
T Consensus 33 ~~kvlVANRgEIaIRvFRa~tEL~~~tvAiYseqD~~sMHRqKADEaY~iGk~l~PV~AYL~ideii~iak~~~vdavHP 112 (1176)
T KOG0369 33 KNKVLVANRGEIAIRVFRAATELSMRTVAIYSEQDRLSMHRQKADEAYLIGKGLPPVGAYLAIDEIISIAKKHNVDAVHP 112 (1176)
T ss_pred HCEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCHHEECCCCCCCHHHHHCHHHHHHHHHHCCCCEECC
T ss_conf 03478852762004788777762544799973111124656304301232677782676514799999998728873257
Q ss_pred ----CCCCCCHHHHHHHH-HCC-CCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEE
Q ss_conf ----77222113334443-020-034876778763152788888765058867432--1000688886410013125540
Q gi|254780158|r 71 ----ESENIPEKSISYLS-TLL-PTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGGFKGKGILK 142 (354)
Q Consensus 71 ----E~E~i~~~~l~~l~-~~~-~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~~g~P~vlK 142 (354)
-.|+ .+..+.+. .++ -+.||++.+....||...|...-++|+|+.|-. .+++.+|..+++++.|+|+|+|
T Consensus 113 GYGFLSEr--sdFA~av~~AGi~fiGPspeVi~~mGDKv~AR~~Ai~agVpvVPGTpgPitt~~EA~eF~k~yG~PvI~K 190 (1176)
T KOG0369 113 GYGFLSER--SDFAQAVQDAGIRFIGPSPEVIDSMGDKVAARAIAIEAGVPVVPGTPGPITTVEEALEFVKEYGLPVIIK 190 (1176)
T ss_pred CCCCCCCC--HHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 74212212--4899999865966968897999884208888899997199715899997542999999998619838996
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHH--------HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEE-EECCCCCCCCCCE
Q ss_conf 234675556645446746778987--------5135550101111456443320101466541399-7053345435550
Q gi|254780158|r 143 TRRLGYDGKGQKVYHENDCTQNLY--------ASLGNVPLILERFTDFNCEISIIAARSLNGSICF-YDPIQNTHVNGIL 213 (354)
Q Consensus 143 p~~~GydGkG~~~i~~~~~l~~~~--------~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~-~p~~en~~~~gil 213 (354)
..-|| .|+|..++++.+++++++ +.++++.+.+|+|++-.+.+.|....|..|+++. |+---.+|+.+.-
T Consensus 191 AAyGG-GGRGmRvVr~~e~vee~f~Ra~SEA~aaFGnG~~FvEkF~ekPrHIEvQllgD~~GNvvHLyERDCSvQRRHQK 269 (1176)
T KOG0369 191 AAYGG-GGRGMRVVRSGEDVEEAFQRAYSEALAAFGNGTLFVEKFLEKPRHIEVQLLGDKHGNVVHLYERDCSVQRRHQK 269 (1176)
T ss_pred ECCCC-CCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHCC
T ss_conf 10168-97643775025569999998889999861786153786625865268987213568789876145516432010
Q ss_pred EEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHH
Q ss_conf 58985278-78789999999988677540246775310455388408999412570456046210013588999999981
Q gi|254780158|r 214 HKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSIT 292 (354)
Q Consensus 214 ~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~ 292 (354)
.--++||. +++++++.+..-|.|+++..||...-++||.++..|+-||.|++||..----+|.+...++-...++|..-
T Consensus 270 VVEiAPA~~Lp~~vR~~~~~davklAk~vgY~NAGTvEFLvD~~g~hYFIEvN~RlQVEHTvTEEITgvDlV~aQi~vAe 349 (1176)
T KOG0369 270 VVEIAPAKTLPPEVRDAILTDAVKLAKHVGYENAGTVEFLVDQKGRHYFIEVNPRLQVEHTVTEEITGVDLVQAQIHVAE 349 (1176)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHC
T ss_conf 36734556599899999999999999984756577078877167978999954643566552310045201011113431
Q ss_pred CCCCCCCHHCCCEEE
Q ss_conf 889997000485679
Q gi|254780158|r 293 NLPLGNPNRHSNCVM 307 (354)
Q Consensus 293 glpl~~~~~~~~~~m 307 (354)
|..|++..+.+..+.
T Consensus 350 G~tLp~lgl~QdkI~ 364 (1176)
T KOG0369 350 GASLPDLGLTQDKIT 364 (1176)
T ss_pred CCCCCCCCCCCCCEE
T ss_conf 787532354302032
No 44
>PRK06395 phosphoribosylamine--glycine ligase; Provisional
Probab=99.93 E-value=1.3e-23 Score=178.91 Aligned_cols=305 Identities=17% Similarity=0.222 Sum_probs=212.2
Q ss_pred CEEEEECCCHHHHHHHHHH--HHCCCEEEEEECCCCCCHH-HCCCEEEECCCCCHHHHHHHHHH--CCEEEECCCCCCH-
Q ss_conf 7899980989899999999--8879789999676777134-22682798789999999999741--9999987722211-
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSA--ARLGFCTVILDPDSNCPAN-QVSNQQIAARHDDIKALNTFADI--CDYATYESENIPE- 77 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA--~~lG~~v~v~d~~~~~pa~-~~ad~~~~~~~~D~~~l~~~~~~--~Dvit~E~E~i~~- 77 (354)
.+|+|||+| ||+.|++- .+-+- +..+-+.+..|+. ..+..++..+..|.+.+.+|+++ .|.+..-.|.--.
T Consensus 3 MkVLViGsG--GREHAla~kl~~s~~-~~~~~~g~gn~g~~~~~~~~~~~~~~d~~~i~~~a~~~~idLvvvGPE~pL~~ 79 (435)
T PRK06395 3 MKVMLVGSG--GREDAIARAIKRSGA-ILFSVIGHENPSIKKLSKKYLFYDEKDYDLIEDFALKNNVDIVFVGPDPVLAT 79 (435)
T ss_pred CEEEEECCC--HHHHHHHHHHHCCCC-CEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHC
T ss_conf 779998878--899999999855988-44999899967877623234656856999999999984999999897678866
Q ss_pred HHHHHH-HHCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
Q ss_conf 333444-3020034-8767787631527888887650588-674321000688886410013125540234675556645
Q gi|254780158|r 78 KSISYL-STLLPTY-PSSRAIEISQDRLYEKKFFQESGLT-TVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQK 154 (354)
Q Consensus 78 ~~l~~l-~~~~~v~-P~~~al~~~~dK~~~K~~l~~~gip-t~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~ 154 (354)
-..+.+ +.+++++ |+..+.++-.+|...|+|++++||| |++|..+.+.++...++...++|+|+|+.-.. .|||+.
T Consensus 80 Gi~D~l~~~gi~vFGP~k~aA~LE~SK~FaK~fm~~~~IP~ta~~~~~~~~~ea~~~~~~~~~piVIKadGLA-aGKGV~ 158 (435)
T PRK06395 80 PLVNNLLKRGIKVASPTMEAAMIETSKMFMRYLMERHNIPGNINFNACFSEKDAARDYITSMKDVAVKPIGLT-GGKGVK 158 (435)
T ss_pred CHHHHHHHCCCCEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCC-CCCCEE
T ss_conf 1455997689946684288732632798899999980998566453239999999999970998489734225-789648
Q ss_pred CCCCH----HHHHHHHHHC--CCCCEEHHHCCCCCCCCCCEECCCCCCC-EEEEECCCCCCC--CCCE------EEEEEC
Q ss_conf 44674----6778987513--5550101111456443320101466541-399705334543--5550------589852
Q gi|254780158|r 155 VYHEN----DCTQNLYASL--GNVPLILERFTDFNCEISIIAARSLNGS-ICFYDPIQNTHV--NGIL------HKSIVP 219 (354)
Q Consensus 155 ~i~~~----~~l~~~~~~~--~~~~~iiEe~I~~~~Eisviv~r~~~G~-~~~~p~~en~~~--~gil------~~s~~P 219 (354)
+..+. +++......+ .+..+++|||+. +.|+|+++.. ||+ +..+|+++.+-+ +|+- .-+++|
T Consensus 159 V~~~~~~~~~ea~~~~~~~~~~~~~vvIEE~L~-G~E~S~~a~~--dG~~~~~lp~aqDhKR~~dgD~GPNTGGMGaysp 235 (435)
T PRK06395 159 VTGEQLNSVDEAIRYAIEILDRDGVVLIEKKMT-GEEFSLQAFS--DGKHLSFMPIVQDYKRAYEGDHGPNTGGMGSISD 235 (435)
T ss_pred EECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE-CCEEEEEEEE--CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 955857789999999998873488599999984-4168999997--6995585873012533447999999998745688
Q ss_pred CC-----CCHHHHHHHHHHHHHHHHHCC-----CCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHH
Q ss_conf 78-----787899999999886775402-----46775310455388408999412570456046210013588999999
Q gi|254780158|r 220 AS-----ISQKTSLLAHSAMRKVLETLD-----YVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIR 289 (354)
Q Consensus 220 a~-----i~~~~~~~a~~~a~~i~~~L~-----~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~r 289 (354)
++ +++++.++++++...++++|. |.|++.+.|++|.+| .+|.|.+-|--+---.++-..--|.|-..+.
T Consensus 236 ~~~~~p~l~~~~~e~~~~Ii~pti~~l~~eg~~y~GvLy~GlMit~~g-pkVlEyN~RfGDPE~QviLp~L~~Dl~~ll~ 314 (435)
T PRK06395 236 RDFSLPFLSKDAPERAKHILNDIIRAMKDENNPFKGIMYGQFMDTPNG-VKVIEINARFADPEGINVLYLLKSDFVETLH 314 (435)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCC-CEEEEEEECCCCCHHHHHHHHHCCCHHHHHH
T ss_conf 888874327789999999999999999964997089987789850899-6489986203880688887760052999999
Q ss_pred HHHCCCCC-CCHHCCC-EEEEEEECCCCC
Q ss_conf 98188999-7000485-679997557702
Q gi|254780158|r 290 SITNLPLG-NPNRHSN-CVMYNIIGSDID 316 (354)
Q Consensus 290 ai~glpl~-~~~~~~~-~~m~nilg~~~~ 316 (354)
+++.-.|. +...... ++-+.+....|+
T Consensus 315 a~~~g~L~~~~~~~~~~~v~vvlas~GYP 343 (435)
T PRK06395 315 QIYSGNLNGSIKFERKATVLKYIVPPGYG 343 (435)
T ss_pred HHHCCCCCCCCEEECCCEEEEEEECCCCC
T ss_conf 99708888775430698799999778888
No 45
>COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=99.93 E-value=5.5e-23 Score=174.64 Aligned_cols=337 Identities=15% Similarity=0.124 Sum_probs=227.6
Q ss_pred EEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH--HCCCEEEECCCCCHHHHHHHH--HHCCEEEECCCCC-CHH
Q ss_conf 89998098-98999999998879789999676777134--226827987899999999997--4199999877222-113
Q gi|254780158|r 5 TIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN--QVSNQQIAARHDDIKALNTFA--DICDYATYESENI-PEK 78 (354)
Q Consensus 5 ~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~--~~ad~~~~~~~~D~~~l~~~~--~~~Dvit~E~E~i-~~~ 78 (354)
.||.-+.| -+|..-|.|.++-|++|+.+++++..... .+||..+.-+.. .+.+..++ +++|.+.+-++.- +..
T Consensus 7 ~Igqa~efdysG~qac~aLkeeg~~vvlvnsnpAti~td~e~AD~~y~eP~~-~E~v~~Ii~~E~~Dailp~~ggqt~Ln 85 (400)
T COG0458 7 VIGQAAEFDYSGTQACKALKEEGYGVVLVNSNPATIMTDPELADKVYIEPIT-KEPVEKIIEKERPDAILPTLGGQTALN 85 (400)
T ss_pred EEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCC-HHHHHHHHHHCCCCEEECCCCCCCHHH
T ss_conf 6676411143678999999866975999728872124780005302662473-788999997537662632468741346
Q ss_pred HHHHHH------H-CCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf 334443------0-20034-876778763152788888765058867432100068888641001312554023467555
Q gi|254780158|r 79 SISYLS------T-LLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDG 150 (354)
Q Consensus 79 ~l~~l~------~-~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydG 150 (354)
....+. + ++++. -++++++++.||.+.|++|+++|+|+| ...+.+.++..+..+.+|||+|+||+. +..|
T Consensus 86 ~~~~l~e~g~l~~~gV~vvgs~~eaI~iaeDr~~fke~m~eigi~~P-~~~~~~~~e~~~~~~~ig~PvIVrP~~-~lGG 163 (400)
T COG0458 86 AALELKEKGVLEKYGVEVVGSDPEAIEIAEDKKLFKEAMREIGIPVP-SRIAHSVEEADEIADEIGYPVIVKPSF-GLGG 163 (400)
T ss_pred HHHHHHHHCCHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHCCCCEEEECCC-CCCC
T ss_conf 88998772645644977994587895564209999999998399988-412356777765576369977980685-7888
Q ss_pred CCCCCCCCHHHHHHHHHHC----CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCE---EEEEECCC-C
Q ss_conf 6645446746778987513----55501011114564433201014665413997053345435550---58985278-7
Q gi|254780158|r 151 KGQKVYHENDCTQNLYASL----GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGIL---HKSIVPAS-I 222 (354)
Q Consensus 151 kG~~~i~~~~~l~~~~~~~----~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil---~~s~~Pa~-i 222 (354)
-|..++++.+|+.+..... ...++++|+++...+|+...+.|+.++++.+-...||.-..|+- ..+.+|++ +
T Consensus 164 ~G~~i~~n~eel~~~~~~~l~~s~~~~vl~eesi~G~ke~e~ev~rd~~~n~ivvc~men~dp~gvhtgdsi~vapaqtl 243 (400)
T COG0458 164 SGGGIAYNEEELEEIIEEGLRASPVEEVLIEESIIGWKEFEYEVVRDGKDNCIVVCNMENLDPMGVHTGDSITVAPAQTL 243 (400)
T ss_pred CCEEEEECHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCCCCC
T ss_conf 75168718999999987322447642001244216856999999983799879998678656566444323652145565
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC-CEEEEEEECCCCCCCEEEEHHHCCCCHHHHH---HHHHHCCCCCC
Q ss_conf 8789999999988677540246775310455388-4089994125704560462100135889999---99981889997
Q gi|254780158|r 223 SQKTSLLAHSAMRKVLETLDYVGILCIEFFVTND-GNVIANEMAPRVHNSGHWTEASCVISQFEQH---IRSITNLPLGN 298 (354)
Q Consensus 223 ~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~d-g~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h---~rai~glpl~~ 298 (354)
++...+..+..+.+++++|+..|=..|+|-+.++ |++||.|++||+.-|- ++.+-.+. |..+ .....|+.+.+
T Consensus 244 ~d~eyq~~r~~~~~iir~igi~G~~niQ~av~~~~~~~~viEvNpRvSrss--aLaskAtg-ypia~vaakla~g~~l~E 320 (400)
T COG0458 244 TDKEYQMLRDAAIKVIREIGIEGGCNIQFAVDPGGGELYVIEINPRVSRSS--ALASKATG-YPIAKVAAKLAVGYTLDE 320 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCC--HHHHHCCC-CHHHHHHHHHHCCCCCHH
T ss_conf 437889988877778887411478731489869985599999568767640--31554468-769999997503567065
Q ss_pred CHHCCCEEEEEEEC-CCCCCHHH--HHCCCCCEEEECCCCCCCCC---CEEEEEEEECCC
Q ss_conf 00048567999755-77022788--97289968997088768979---742599872688
Q gi|254780158|r 299 PNRHSNCVMYNIIG-SDIDQYEQ--WLHCDSSVIHIYGKSQTLCG---RKMGHVTQIYPK 352 (354)
Q Consensus 299 ~~~~~~~~m~nilg-~~~~~~~~--~~~~~~~~~~~YgK~~~r~~---RkmGHvt~~~~~ 352 (354)
+. .+- +..+ ...+...+ ....|.|.+..|-..+.+-+ .+.|-|..+++.
T Consensus 321 i~--n~i---t~~t~a~fePsldyvv~k~pr~~f~kf~~~~~~l~~~mks~gevm~igr~ 375 (400)
T COG0458 321 IR--NDI---TGRTPASFEPSLDYVVTKIPRFDFEKFPGADRRLGTQMKSVGEVMAIGRT 375 (400)
T ss_pred HC--CCC---CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCH
T ss_conf 44--766---44434445776660366347787321345563310023001028996312
No 46
>PRK05784 phosphoribosylamine--glycine ligase; Provisional
Probab=99.92 E-value=1.9e-22 Score=170.98 Aligned_cols=302 Identities=16% Similarity=0.189 Sum_probs=201.0
Q ss_pred EEEEECCCHHHHHHHHHHH--H--CCCEEEEEECCCCCCHH-HCCC----EEEECCCCCHHHHHHHHHH--CCEEEECCC
Q ss_conf 8999809898999999998--8--79789999676777134-2268----2798789999999999741--999998772
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAA--R--LGFCTVILDPDSNCPAN-QVSN----QQIAARHDDIKALNTFADI--CDYATYESE 73 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~--~--lG~~v~v~d~~~~~pa~-~~ad----~~~~~~~~D~~~l~~~~~~--~Dvit~E~E 73 (354)
+|+|||+| ||+.|++-+ + ..-++. +.|....|+. ++|. ..+.++.+|.+++.+|+++ +|.+..-.|
T Consensus 2 kVLVIGsG--GREHAla~kl~~Sp~v~~l~-~aPGn~NpG~~~~a~~~~~~~~~~~~~d~~~i~~fa~~~~IDLvvVGPE 78 (485)
T PRK05784 2 KVLLVGDG--AREHAIAEALAKSPKGYRIY-ALSSHLNPGIEEIVKKTGGEYFIGNPTSPGEVVKAAEEVSPDLVVIGPE 78 (485)
T ss_pred EEEEECCC--HHHHHHHHHHHCCCCCCEEE-EEECCCCCCHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCEEEECCH
T ss_conf 89998988--89999999996098989899-9738987525677642587212048779999999999819999998973
Q ss_pred CC-CHHHHHHHH-HCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf 22-113334443-020034-8767787631527888887650588-6743210006888864100131255402346755
Q gi|254780158|r 74 NI-PEKSISYLS-TLLPTY-PSSRAIEISQDRLYEKKFFQESGLT-TVDFYEINSQESLTNILGGFKGKGILKTRRLGYD 149 (354)
Q Consensus 74 ~i-~~~~l~~l~-~~~~v~-P~~~al~~~~dK~~~K~~l~~~gip-t~~~~~v~s~~el~~~~~~~g~P~vlKp~~~Gyd 149 (354)
.- ..-..+.++ .+++++ |+.++.++-.+|...|+|++++||| |+.|..+++.+++.++++..+ |+|+|+.-+. .
T Consensus 79 ~PL~~Gi~D~l~~~gi~vFGP~k~aA~LE~SK~FaK~fm~~~~IPtta~~~~f~~~~~A~~~l~~~~-piVIKaDGLA-a 156 (485)
T PRK05784 79 EPLFAGVADALREEGFPVFGASSKCAEIEKSKVFARSLMWKYGIPGRLRYGVFKDVEEAYSFAEYGG-SVAIKPARQA-G 156 (485)
T ss_pred HHHHHHHHHHHHHCCCCEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC-CEEEECCHHC-C
T ss_conf 8876125899973799078968899414127889999999728996640121389999999986489-8499211330-6
Q ss_pred CCCCCCCCCHH-----HHHHHH--------H---HCC--CCCEEHHHCCCCCCCCCCEECCCCCCC-EEEEECCCCCCC-
Q ss_conf 56645446746-----778987--------5---135--550101111456443320101466541-399705334543-
Q gi|254780158|r 150 GKGQKVYHEND-----CTQNLY--------A---SLG--NVPLILERFTDFNCEISIIAARSLNGS-ICFYDPIQNTHV- 209 (354)
Q Consensus 150 GkG~~~i~~~~-----~l~~~~--------~---~~~--~~~~iiEe~I~~~~Eisviv~r~~~G~-~~~~p~~en~~~- 209 (354)
||||.++.+.. +.+++. . .++ +..++||||+. +.|+|+++..| |+ +..+|+++.+-+
T Consensus 157 GKGV~V~~~~~~~~~~~~~e~~~~~~~~~~~~~~~fg~ag~~VvIEEfL~-G~E~S~~a~~D--G~~~~~lp~aQDhKR~ 233 (485)
T PRK05784 157 GKGVKVIYDLQAYLSNEKDEVLTKGAEEIKEQLASYRDVEEKILVEEKVD-GVEYTVQVLTD--GESVFPLPPVQDNPHA 233 (485)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-CCEEEEEEEEE--CCEEEECCCCCCCCCC
T ss_conf 78518822727777778999999999999987654324687099996446-81799999982--9969989222057655
Q ss_pred -CCCE------EEEEECCC-----CCHHHHHHHHHHHHHHHHHC------CCCCCCCCEEEECCCCEEEEEEECCCCCCC
Q ss_conf -5550------58985278-----78789999999988677540------246775310455388408999412570456
Q gi|254780158|r 210 -NGIL------HKSIVPAS-----ISQKTSLLAHSAMRKVLETL------DYVGILCIEFFVTNDGNVIANEMAPRVHNS 271 (354)
Q Consensus 210 -~gil------~~s~~Pa~-----i~~~~~~~a~~~a~~i~~~L------~~~Gv~~VEffv~~dg~i~vnEiaPR~Hns 271 (354)
+|+. .-+++|++ ++++..+++.++....+++| .|.|++.+.|++|++| .+|.|.+-|--+-
T Consensus 234 ~dgD~GPNTGGMGAysP~~~~~P~l~~~~~~~~~~Ii~pti~~l~~e~g~~y~GvLY~GlMit~~G-PkVlEfN~RfGDP 312 (485)
T PRK05784 234 YEYGIGPETGGMGSVSGPGELLPFIEEEEYEEAVEIVKATVEAIRKETGERYVGVLSGQMMLTALG-PTVIEYYSRLGDP 312 (485)
T ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC-CEEEEEECCCCCC
T ss_conf 689999899987006787667754479999999874899999998616997278887678861898-4899996887883
Q ss_pred EEEEHHH-CCCCHHHHHHHHHHCCCCCC--CHHCCC-EEEEEEECCCCC
Q ss_conf 0462100-13588999999981889997--000485-679997557702
Q gi|254780158|r 272 GHWTEAS-CVISQFEQHIRSITNLPLGN--PNRHSN-CVMYNIIGSDID 316 (354)
Q Consensus 272 gh~t~~~-~~~sqfe~h~rai~glpl~~--~~~~~~-~~m~nilg~~~~ 316 (354)
---++-. ..++-++....++.| .|.+ .+.... ++-+.+....|+
T Consensus 313 EtQ~iLp~L~sDl~~l~~a~~~g-~L~~~~~~~~~~~av~VVlAs~GYP 360 (485)
T PRK05784 313 EALNALYLYEGDFYELFELAATG-KLHKAERRFKEEPTVVKAIAPLGYP 360 (485)
T ss_pred HHHHHHHHHHCCHHHHHHHHHCC-CCCCCCEEECCCCEEEEEEECCCCC
T ss_conf 38889987426399999999819-9887870476895699999469999
No 47
>PRK06849 hypothetical protein; Provisional
Probab=99.91 E-value=1.5e-21 Score=165.01 Aligned_cols=278 Identities=16% Similarity=0.135 Sum_probs=195.4
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEECC--CCCH----HHHHHHHH--HCCEEEE
Q ss_conf 88789998098-9899999999887978999967677713--42268279878--9999----99999974--1999998
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAAR--HDDI----KALNTFAD--ICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~~--~~D~----~~l~~~~~--~~Dvit~ 70 (354)
++|||+|-||. --+..++....+.|++|++.|+.+...+ .+..+.++..+ ..|. ++|.++++ ++|++++
T Consensus 3 ~p~tvLiTg~r~~~aL~laR~l~~~Gh~V~~aD~~~~~l~r~Sr~v~~~~~vP~P~~d~~~y~~~Ll~Iv~~e~idl~IP 82 (387)
T PRK06849 3 TPKTVLITGARAPAALQLARSFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPKWDPNAYIQALLSIVKRHNIDLLIP 82 (387)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 98779995886078999999998789979998489877542000011279869997898999999999999838999997
Q ss_pred CCCCCCH--HHHHHHHHCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH-CCCCEEEEECCCC
Q ss_conf 7722211--3334443020034-8767787631527888887650588674321000688886410-0131255402346
Q gi|254780158|r 71 ESENIPE--KSISYLSTLLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILG-GFKGKGILKTRRL 146 (354)
Q Consensus 71 E~E~i~~--~~l~~l~~~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~-~~g~P~vlKp~~~ 146 (354)
-.|-+-. .....+.....++ |+.+.+....||...-++++++|+|+|+++.+++.+|+..+.. ..+.|+|+||..
T Consensus 83 ~~eev~~~a~~~~~l~~~~~~~~~d~~~l~~LhdK~~F~~~a~~lGl~vP~T~~i~s~edv~~~~~~~~~~~~ilKPv~- 161 (387)
T PRK06849 83 TCEEVFYLSLAKEELSAYCHVFHFDFDLLLMLHNKFEFIQQARSLGLSAPKTYLITDPEAIINFDFKTPHTPYVLKPIY- 161 (387)
T ss_pred CCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCCCEEECCCC-
T ss_conf 7768999986576447676376589999998644899999999749999988981899999865533668978982376-
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEE---EECCCCCCCCCCEEEEEECCCCC
Q ss_conf 755566454467467789875135550101111456443320101466541399---70533454355505898527878
Q gi|254780158|r 147 GYDGKGQKVYHENDCTQNLYASLGNVPLILERFTDFNCEISIIAARSLNGSICF---YDPIQNTHVNGILHKSIVPASIS 223 (354)
Q Consensus 147 GydGkG~~~i~~~~~l~~~~~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~---~p~~en~~~~gil~~s~~Pa~i~ 223 (354)
|-+|.++....+.++++.+- ...+.+++++|||+ +.|+....+. .+|++.. |+. ....++-....+-+. +
T Consensus 162 ~~~~~~v~~~~~~~~l~~l~-~s~~~p~v~Qe~I~-G~~~ct~al~-~~Gkv~A~~~y~~--~~~~~~g~~v~fe~v--~ 234 (387)
T PRK06849 162 SRFVRRVDLTKTKAAVLKLP-ISHKSPWIMQEFIP-GQEYCSYSIV-RSGELRAHSCYKP--EFTAGLGAQIAFQPI--N 234 (387)
T ss_pred CCCCCEEEECCCHHHHHCCC-CCCCCCEEEEEECC-CCEEEEEEEE-ECCEEEEEEEEEC--CEECCCCEEEEEEEC--C
T ss_conf 66533365215977861588-76679828998716-9675899997-8999999998204--220588405788975--8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 7899999999886775402467753104553884089994125704560462100135889999999818899
Q gi|254780158|r 224 QKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPL 296 (354)
Q Consensus 224 ~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl 296 (354)
. .++.+.++++++.++|.|.++.||.+++||++|+.|.+||.|..=|+-.+.+.. .+|.++-+.
T Consensus 235 ~---p~i~e~v~~f~~~~~~tG~isFDFI~~~dG~~~~IECNPR~tSgi~lf~~~~~~------a~a~~~~~~ 298 (387)
T PRK06849 235 N---PRIEEFVTHFVKELNYTGQISFDFIQTENGDAYPIECNPRTTSGLHLFDDHPGI------LPAYLNEKV 298 (387)
T ss_pred C---HHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCCCCEEEECCCHHH------HHHHHCCCC
T ss_conf 8---899999999998478515899999998999889998459866644651587558------998635666
No 48
>pfam01071 GARS_A Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain. Phosphoribosylglycinamide synthetase catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by Phosphoribosylglycinamide synthetase is the ATP- dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide. This domain is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase (see pfam02786).
Probab=99.90 E-value=3.3e-23 Score=176.12 Aligned_cols=166 Identities=19% Similarity=0.300 Sum_probs=123.2
Q ss_pred HCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC--------CC
Q ss_conf 1527888887650588674321000688886410013125540234675556645446746778987513--------55
Q gi|254780158|r 100 QDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASL--------GN 171 (354)
Q Consensus 100 ~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~--------~~ 171 (354)
.||..+|++|+++|||+|+|..++|.+++.++++++|||+|+||..+ .+|+|++++++.+++..++..+ .+
T Consensus 1 gdK~~~r~~l~~~gip~p~~~~~~~~~ea~~~~~~~g~P~VvKp~~~-~gs~Gv~~v~~~~e~~~a~~~~~~~~~~~~~~ 79 (193)
T pfam01071 1 GSKSFAKDFMKRHGIPTAEYETFTDPEEAKSYIREAGFPAVVKADGL-AAGKGVIVAMDNEEAIKAVDEILEQKKFGEAG 79 (193)
T ss_pred CCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEECCC-CCCCCEEEECCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 98899999999869899990787899999999997699889997434-67883799545899999999998523035789
Q ss_pred CCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCC--CCC------EEEEEECCC-CCHHHHHHHH-HHHHHH---H
Q ss_conf 50101111456443320101466541399705334543--555------058985278-7878999999-998867---7
Q gi|254780158|r 172 VPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHV--NGI------LHKSIVPAS-ISQKTSLLAH-SAMRKV---L 238 (354)
Q Consensus 172 ~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~--~gi------l~~s~~Pa~-i~~~~~~~a~-~~a~~i---~ 238 (354)
.+++||+|++ +.|+||.++.+ .+++.+.+.++++.+ ++. -..++.|+. ++++..+++. ++...+ +
T Consensus 80 ~~vlvEefl~-G~E~sv~~~~d-g~~~~~~~~~~~~k~~~~~d~g~~tg~~g~~~p~~~~~~~~~~~~~~~i~~~~~~al 157 (193)
T pfam01071 80 EPVVIEEFLE-GEEVSVLAFVD-GKTVKPLPPAQDHKRLGEGDTGPNTGGMGAYSPAPVLTPELLERIKETIVEPTVDGL 157 (193)
T ss_pred CCEEEEEECC-CCEEEEEEEEE-CCEEEEEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9789987205-71655789840-997997142176445015788887799724634755898999999999999999999
Q ss_pred HHCC--CCCCCCCEEEECCCCEEEEEEECCCCC
Q ss_conf 5402--467753104553884089994125704
Q gi|254780158|r 239 ETLD--YVGILCIEFFVTNDGNVIANEMAPRVH 269 (354)
Q Consensus 239 ~~L~--~~Gv~~VEffv~~dg~i~vnEiaPR~H 269 (354)
.+.+ |.|++++||++|++| .||.|++||.=
T Consensus 158 ~~~g~~~~G~~h~e~~lt~~G-P~vIEiN~RlG 189 (193)
T pfam01071 158 RKEGIPYKGVLYAGLMLTKDG-PKVLEFNCRFG 189 (193)
T ss_pred HHCCCCCEEEEEEEEEEECCC-EEEEEEECCCC
T ss_conf 974999688999999998995-79999939998
No 49
>pfam08443 RimK RimK-like ATP-grasp domain. This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK.
Probab=99.88 E-value=1.6e-22 Score=171.59 Aligned_cols=171 Identities=14% Similarity=0.205 Sum_probs=128.5
Q ss_pred HHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCEE
Q ss_conf 3152788888765058867432100068888641001-3125540234675556645446746778987513--555010
Q gi|254780158|r 99 SQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGF-KGKGILKTRRLGYDGKGQKVYHENDCTQNLYASL--GNVPLI 175 (354)
Q Consensus 99 ~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~-g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~--~~~~~i 175 (354)
++||..+|++|+++|||||+|..+.+.+++.++++.+ |||+|+||+.||+ |+|+.++++.+++..+.+.. .+.+++
T Consensus 1 a~DK~~tk~ll~~~Gip~P~~~~~~~~~~~~~~~~~~~g~PvVvKP~~g~~-g~gV~~v~~~~el~~~~~~~~~~~~~vl 79 (190)
T pfam08443 1 ARDKAKSHQLLAKHGIPVPNTGLAWSPEDAEKFIEQIKGFPVVVKSVFGSQ-GIGVFLAEDEQSLEQLLEAFKWLKNQIL 79 (190)
T ss_pred CCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEECCCCCC-CCCEEEEECHHHHHHHHHHHHHCCCCEE
T ss_conf 978899999999879797998998899999999998089838996788999-8455886063777788888863487377
Q ss_pred HHHCCCC--CCCCCCEECCCCCCCEEEEECCCCCCCCCCEEE------EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 1111456--443320101466541399705334543555058------98527878789999999988677540246775
Q gi|254780158|r 176 LERFTDF--NCEISIIAARSLNGSICFYDPIQNTHVNGILHK------SIVPASISQKTSLLAHSAMRKVLETLDYVGIL 247 (354)
Q Consensus 176 iEe~I~~--~~Eisviv~r~~~G~~~~~p~~en~~~~gil~~------s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~ 247 (354)
+|+||+. ++|+.+.++ +|++. +.++....++.++. ...|..++++ .++++.+++++||+ |+.
T Consensus 80 vqefI~~~~~~dirv~vi---~~~~~--~~~~~~~~~~~~~~n~~~g~~~~~~~l~~e----~~e~a~~a~~algl-~~~ 149 (190)
T pfam08443 80 VQEFIAEAGNRDIRCLVV---GGEVV--GAIHRQSNEGDFRTNLHRGGVAEPYQLSQE----EEEIAIKAAQAMGL-DVL 149 (190)
T ss_pred EEEEEECCCCCEEEEEEE---CCCEE--EEEEEECCCCCCCCCCCCCCEECCCCCCHH----HHHHHHHHHHHHCC-CEE
T ss_conf 555660478854899996---06336--789997466762143246862458766889----99999999997389-979
Q ss_pred CCEEEECCCCEEEEEEECCCCCCCEEEEH-HHCCCCHH
Q ss_conf 31045538840899941257045604621-00135889
Q gi|254780158|r 248 CIEFFVTNDGNVIANEMAPRVHNSGHWTE-ASCVISQF 284 (354)
Q Consensus 248 ~VEffv~~dg~i~vnEiaPR~Hnsgh~t~-~~~~~sqf 284 (354)
+||||.++|| .||+|++++| |+-.+ .++..+-.
T Consensus 150 gVD~~~~~~g-~~vlEvN~~P---g~~~~~~~~g~~i~ 183 (190)
T pfam08443 150 GVDIFRSKRG-LLVCEVNSSP---GLKGIERTTGINIA 183 (190)
T ss_pred EEEEEEECCC-EEEEEECCCC---CCHHHHHHHCCCHH
T ss_conf 9999997996-7999966984---60478988794999
No 50
>KOG0370 consensus
Probab=99.88 E-value=2.9e-20 Score=156.31 Aligned_cols=298 Identities=12% Similarity=0.163 Sum_probs=221.7
Q ss_pred CCEEEEECCCHH-----------HHHHHHHHHHCCCEEEEEECCCCCCHHH--CCCEEEECCCCCHHHHHHH--HHHCC-
Q ss_conf 878999809898-----------9999999988797899996767771342--2682798789999999999--74199-
Q gi|254780158|r 3 KKTIGIIGGGQL-----------ARMLSMSAARLGFCTVILDPDSNCPANQ--VSNQQIAARHDDIKALNTF--ADICD- 66 (354)
Q Consensus 3 ~k~IgIlG~GqL-----------~rml~~aA~~lG~~v~v~d~~~~~pa~~--~ad~~~~~~~~D~~~l~~~--~~~~D- 66 (354)
.+-+++||+|-- +.--+...+++|++++++.-+|+..... .||+-|.-... .+.+..+ .+.|.
T Consensus 918 ~~g~mVlGsGvYrIGSSVEFDwcaV~~~rtLr~~g~kTimvNyNPETVSTDyDecdrLYFeeis-~E~vmDiYe~E~~~G 996 (1435)
T KOG0370 918 EHGVMVLGSGVYRIGSSVEFDWCAVGCARTLRKLGKKTIMVNYNPETVSTDYDECDRLYFEEIS-YERVMDIYELENSEG 996 (1435)
T ss_pred CCCEEEECCCCEECCCCEEECHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHCCCCC
T ss_conf 8865997243256356205513355479999970984699956865435756777667675423-665343554306772
Q ss_pred EEEECCCCCCHH-HHHHHHHCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf 999877222113-334443020034-876778763152788888765058867432100068888641001312554023
Q gi|254780158|r 67 YATYESENIPEK-SISYLSTLLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 67 vit~E~E~i~~~-~l~~l~~~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
+|..-=.++|-. ++..-.+++++. .+|+.+..+.||++.-+.|++.|+..|+|...++.+++.+++++.||||++.|.
T Consensus 997 ~iis~GGQ~pnNiA~~L~r~~~kilGTsP~~ID~AEnR~kFS~~Ld~i~v~Qp~Wkelt~~~eA~~F~~~VgYP~lvRPS 1076 (1435)
T KOG0370 997 IIISVGGQLPNNIALKLHRNGVKILGTSPEMIDSAENRFKFSRMLDSIGVDQPAWKELTSLEEAKKFAEKVGYPVLVRPS 1076 (1435)
T ss_pred EEEEECCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCEEECCC
T ss_conf 69983684862021375862886754885761114567789998877278861023322688999999865996685110
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHC----CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCC----CCCEEEE
Q ss_conf 4675556645446746778987513----5550101111456443320101466541399705334543----5550589
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYASL----GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHV----NGILHKS 216 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~~~----~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~----~gil~~s 216 (354)
.-= +|--.-++.+.+|++..+... .+.|+++-+||+..+|+.|.+| ..+|++.+-.+.|++.. .|+-...
T Consensus 1077 YVL-SGaAMnv~~~~~dl~~~L~~A~~vs~dhPVVisKfie~AkEidvDAV-a~~G~~~~haiSEHvEnAGVHSGDAtlv 1154 (1435)
T KOG0370 1077 YVL-SGAAMNVVYSESDLKSYLEQASAVSPDHPVVISKFIEGAKEIDVDAV-ASDGKVLVHAISEHVENAGVHSGDATLV 1154 (1435)
T ss_pred CEE-CCHHHHHHHCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEECHHHH-CCCCEEEEEEHHHHHHCCCCCCCCEEEE
T ss_conf 133-10155521047889999997764087797772775444501031231-0478189986233411246557860375
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 85278787899999999886775402467753104553884089994125704560462100135889999999818899
Q gi|254780158|r 217 IVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPL 296 (354)
Q Consensus 217 ~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl 296 (354)
..|..++++..+++++++.|++++|+..|-|.+.|.. +|+++.|.|-+-|+..|--+---.-..+--+.-.|+++|.|+
T Consensus 1155 ~Ppq~l~~~t~~rik~i~~ki~~a~~itGPfN~Q~i~-k~n~lkVIECN~RaSRSFPFvSKtlgvdfi~~At~~i~g~~~ 1233 (1435)
T KOG0370 1155 LPPQDLSADTLERIKDIAAKVAKALKITGPFNMQIIA-KDNELKVIECNVRASRSFPFVSKTLGVDFIALATRAIMGVPV 1233 (1435)
T ss_pred CCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-CCCEEEEEEEEEEEECCCCCEEHHCCCHHHHHHHHHHHCCCC
T ss_conf 7811249889999999999998886166874379995-498078999640343366630010583199998899738978
Q ss_pred CCCHHCCC
Q ss_conf 97000485
Q gi|254780158|r 297 GNPNRHSN 304 (354)
Q Consensus 297 ~~~~~~~~ 304 (354)
....+..+
T Consensus 1234 ~~~~~~~~ 1241 (1435)
T KOG0370 1234 PPDLLLHP 1241 (1435)
T ss_pred CCCCCCCC
T ss_conf 87535578
No 51
>TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX; InterPro: IPR011870 The family of proteins found in this family include the characterised LysX from Thermus thermophilus which is part of a well-organised lysine biosynthesis gene cluster . LysX is believed to carry out an ATP-dependent acylation of the amino group of alpha-aminoadipate in the prokaryotic version of the fungal AAA lysine biosynthesis pathway. No species having a sequence in this family contains the elements of the more common diaminopimelate lysine biosythesis pathway, and none has been shown to be a lysine auxotroph. These sequences have mainly recieved the name of the related enzyme, "ribosomal protein S6 modification protein RimK". RimK has been characterised in Escherichia coli, and acts by ATP-dependent condensation of S6 with glutamate residues .; GO: 0003824 catalytic activity, 0005524 ATP binding, 0009085 lysine biosynthetic process.
Probab=99.87 E-value=9.4e-21 Score=159.59 Aligned_cols=239 Identities=17% Similarity=0.175 Sum_probs=167.0
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCH----HHHHHHH-HCCCC
Q ss_conf 999999998879789999676777134226827987899999999997419999987722211----3334443-02003
Q gi|254780158|r 15 ARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPE----KSISYLS-TLLPT 89 (354)
Q Consensus 15 ~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~----~~l~~l~-~~~~v 89 (354)
=+||.+++++||+++-.+.....+ ..+-| .. +.+ ....|+.+. . ++.. .+...++ -++++
T Consensus 12 EKmL~e~l~~lg~~v~~i~~~~~~--~~~~d------~~----i~~-~~~~dv~i~-R-~VS~~R~L~~a~~~E~~G~~~ 76 (289)
T TIGR02144 12 EKMLLEELEKLGLQVRVIYVPELA--LPFGD------LG----IKE-LEDLDVAII-R-NVSQSRALYSAFLLEAVGVPT 76 (289)
T ss_pred HHHHHHHHHHHCCCCEEEECCCEE--ECCCC------CC----CCH-HCCCCEEEE-C-HHHHHHHHHHHHHHHHCCCEE
T ss_conf 999999998728973266203402--20788------56----300-037556898-3-034567999999998489715
Q ss_pred CCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH-
Q ss_conf 4876778763152788888765058867432100068888641001312554023467555664544674677898751-
Q gi|254780158|r 90 YPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYAS- 168 (354)
Q Consensus 90 ~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~- 168 (354)
..+++++..|+||+.+...|.++|||||++..+.+.+++.++.+++|||+|+||..||+ ||=+.++++.++++.+.+.
T Consensus 77 iN~~~~i~~cgDK~~T~~~L~~~gvP~P~t~~a~d~~~A~~~~e~lGYPvV~KP~~GSW-GRlV~~~~d~~~~~~llEh~ 155 (289)
T TIGR02144 77 INSSHAIIACGDKIFTTLKLAKAGVPTPRTYIAFDREAALKAAEELGYPVVLKPVIGSW-GRLVSKIRDKDELESLLEHK 155 (289)
T ss_pred ECCHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCEEEECCCCCH-HHHHHHHCCHHHHHHHHHHH
T ss_conf 27758987504618899999966788983589828689999999708988970888843-78876403788988999999
Q ss_pred --CCC---CCEEHHHCCCC-CCCCCCEECCCCCCCEEEEECCC--CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --355---50101111456-44332010146654139970533--45435550589852787878999999998867754
Q gi|254780158|r 169 --LGN---VPLILERFTDF-NCEISIIAARSLNGSICFYDPIQ--NTHVNGILHKSIVPASISQKTSLLAHSAMRKVLET 240 (354)
Q Consensus 169 --~~~---~~~iiEe~I~~-~~Eisviv~r~~~G~~~~~p~~e--n~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~ 240 (354)
+.+ .=++++|||+. +|-|-+.|+.+. .-..+|...+ +...|-=+=---.|.++++ +++++|.|++++
T Consensus 156 e~~~~~~~~~~y~QEfi~KPgRDIR~fViGd~-~~~AIYR~~~P~~W~TNtArGG~A~P~~~~~----e~~~La~kA~~a 230 (289)
T TIGR02144 156 EVLGGSQLKLYYVQEFINKPGRDIRVFVIGDE-AIAAIYRYSEPNHWRTNTARGGKAEPCKIDE----EVEELAVKAAEA 230 (289)
T ss_pred HHHCCCCCCEEEEEEEECCCCCEEEEEEECCC-CEEEEEECCCCCCHHHHHHCCCCCCCCCCCH----HHHHHHHHHHHH
T ss_conf 98679763337999887188960899999797-3167883388530255630588447887687----689999999999
Q ss_pred CCCCCCCCCEEEECCCC-----EEEEEEECCCC--CCCEEEE
Q ss_conf 02467753104553884-----08999412570--4560462
Q gi|254780158|r 241 LDYVGILCIEFFVTNDG-----NVIANEMAPRV--HNSGHWT 275 (354)
Q Consensus 241 L~~~Gv~~VEffv~~dg-----~i~vnEiaPR~--Hnsgh~t 275 (354)
+|. ++.+|+.|.+++. .++|||++|=| .||-+.|
T Consensus 231 vgg-~~~~iDi~Es~~rqndW~GlLV~EVN~~~EFKN~~rvT 271 (289)
T TIGR02144 231 VGG-EVVGIDIVESKRRQNDWGGLLVNEVNGVPEFKNTVRVT 271 (289)
T ss_pred HCC-EEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEC
T ss_conf 788-27899886433445443786897356897727857774
No 52
>KOG2835 consensus
Probab=99.87 E-value=1e-23 Score=179.50 Aligned_cols=175 Identities=15% Similarity=0.063 Sum_probs=152.3
Q ss_pred EEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 10111145644332010146654139970533454355505898527878789999999988677540246775310455
Q gi|254780158|r 174 LILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGILHKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFV 253 (354)
Q Consensus 174 ~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv 253 (354)
...|+|.+|.+|+.+..+|+.+|-..+||.++.++++.|+....+|+ .+++.++.-.++.....|.+-|.++++.|+
T Consensus 3 l~~~~~~~~~k~la~gkvr~v~~~~~~~~~vlti~kD~I~a~~~~~a---~~I~~ka~il~k~t~~~F~~l~~~gv~~~~ 79 (373)
T KOG2835 3 LTTESLDPLGKELAEGKVRDVYELVDSPGLVLTISKDRITALDAAMA---NSIQGKAAILNKITSFVFELLGEAGIETAF 79 (373)
T ss_pred CCCCCCCCHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_conf 41112242132343454421024566887367765054103444542---012567789887666667654032012111
Q ss_pred CCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCC----CCCHHC-CCEEEEEEECCCCCC------HHHHH
Q ss_conf 3884089994125704560462100135889999999818899----970004-856799975577022------78897
Q gi|254780158|r 254 TNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPL----GNPNRH-SNCVMYNIIGSDIDQ------YEQWL 322 (354)
Q Consensus 254 ~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl----~~~~~~-~~~~m~nilg~~~~~------~~~~~ 322 (354)
+.++....||.+|||||++||+++.|.+|||+.|.|+|+++|+ ...... ..+.|.|++|++.-. ...-.
T Consensus 80 ~~~~~~t~~~~~p~~~~~~~~v~~~~~ts~f~k~~~~vp~~~~~~~~~~~S~~k~~a~~~n~~g~e~~~~~~~~li~r~~ 159 (373)
T KOG2835 80 TEQCGETAFEARPCPMTPIEWVTRRCATSSFEKKNPGVPEGYRFRGYKTESTFKDDANMDNVWGDEQIIDCAGLLIGRDE 159 (373)
T ss_pred CCCCCHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCHHH
T ss_conf 03444134422788778730478622236688758667654153476565200221223763330134444433301011
Q ss_pred CCCCCEEEECCCCCCCCCCEEEEEEEECCC
Q ss_conf 289968997088768979742599872688
Q gi|254780158|r 323 HCDSSVIHIYGKSQTLCGRKMGHVTQIYPK 352 (354)
Q Consensus 323 ~~~~~~~~~YgK~~~r~~RkmGHvt~~~~~ 352 (354)
..++..+|+|+| |++++|||||.+.+.|.
T Consensus 160 ~~~~~~~~~~if-es~k~~~~~h~~~I~d~ 188 (373)
T KOG2835 160 VKIMQKLPLYIF-ESLKAAWAGHNCAISDM 188 (373)
T ss_pred CCCCCCCCCCHH-HHHHHHHCCCCCCCCCC
T ss_conf 441000440001-02345424776535642
No 53
>TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family; InterPro: IPR004666 Escherichia coli RimK adds additional Glu residues to the native Glu-Glu C-terminus of ribosomal protein S6. Mutation of the Glu-Glu terminus to Lys-Glu blocked addition. S6 has the C-terminal sequence Glu-Glu in few species, suggesting the homolog of rimK may have a function other than S6 modification in those species. However, most species having a member of this protein subfamily do not have an S6 homolog ending in Glu-Glu.; GO: 0006464 protein modification process.
Probab=99.87 E-value=1e-20 Score=159.31 Aligned_cols=239 Identities=14% Similarity=0.169 Sum_probs=175.4
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCCHHHCCC-EEEECCCCCHH-HHHHHHHHCCEEEECC--CCCC----HHHHHHHH-H
Q ss_conf 9999999988797899996767771342268-27987899999-9999974199999877--2221----13334443-0
Q gi|254780158|r 15 ARMLSMSAARLGFCTVILDPDSNCPANQVSN-QQIAARHDDIK-ALNTFADICDYATYES--ENIP----EKSISYLS-T 85 (354)
Q Consensus 15 ~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad-~~~~~~~~D~~-~l~~~~~~~Dvit~E~--E~i~----~~~l~~l~-~ 85 (354)
-+||..+|.++|+++-++++.... ..+.+ -+..+-+.... .-.-+....|++..=+ .|+. ..++..|+ .
T Consensus 20 ~~~L~~~~~~~~~~~~~~~~~~~~--~~~~~P~~~~I~~~~~~~~~~~~~~~~d~~~~R~~TPWv~~~~~~~~~r~lE~~ 97 (321)
T TIGR00768 20 EKMLKEAAEERGIDYKVVTPPEIV--LTFNQPAAFSIFYKEPRKNKELALAELDVVIVRIGTPWVSSFRGLAVLRALESL 97 (321)
T ss_pred HHHHHHHHHHHCCCEEEECCHHHE--ECCCCCCCCEEECCCCCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf 999999999717953676041220--036888510011145410010231178889983899751102688999999858
Q ss_pred CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC--------HHHHHHHHHHCCC---CEEEEECCCCCCCCCCCC
Q ss_conf 20034876778763152788888765058867432100--------0688886410013---125540234675556645
Q gi|254780158|r 86 LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEIN--------SQESLTNILGGFK---GKGILKTRRLGYDGKGQK 154 (354)
Q Consensus 86 ~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~--------s~~el~~~~~~~g---~P~vlKp~~~GydGkG~~ 154 (354)
++++..+++++..|+||+..-.+|.++|||+|.+.... |.+++..+++++| ||+|+||..|+ -|+++.
T Consensus 98 G~~~~N~s~aI~~a~dK~~s~~~L~~~G~P~P~~~~~~PqnfDReW~~~~a~~~ie~~g~lEfP~V~Kp~~GS-~G~~V~ 176 (321)
T TIGR00768 98 GVPVINSSQAILNAGDKVLSHQLLAKAGVPLPRTGVAGPQNFDREWSPEEALKLIEEIGQLEFPVVLKPVFGS-WGRLVS 176 (321)
T ss_pred CCEECCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCC-CCCEEE
T ss_conf 9631070699862146589999999586898733573663224358988999999873176424587178563-542689
Q ss_pred CCCCHHHHHHHHHHC---CC---CCEEHHHCCC--C--CCCCCCEECCCCCCCE--EEEECCC------CCCCCCCEEEE
Q ss_conf 446746778987513---55---5010111145--6--4433201014665413--9970533------45435550589
Q gi|254780158|r 155 VYHENDCTQNLYASL---GN---VPLILERFTD--F--NCEISIIAARSLNGSI--CFYDPIQ------NTHVNGILHKS 216 (354)
Q Consensus 155 ~i~~~~~l~~~~~~~---~~---~~~iiEe~I~--~--~~Eisviv~r~~~G~~--~~~p~~e------n~~~~gil~~s 216 (354)
++++...++...+.+ .+ .-++++|||+ - +|.|-++|+- |++ .+|..+. |.++.|-
T Consensus 177 l~~D~~~~~~~~e~~~~~~~~~~~~~~~QeyI~Pv~~~grDIR~fVvG---d~v~aA~~R~~~~~~w~~N~a~GG~---- 249 (321)
T TIGR00768 177 LARDKQAAETLLEHFEQLNGPQYKVFLVQEYIKPVKPGGRDIRVFVVG---DEVVAAIYRIITSGHWRTNLARGGK---- 249 (321)
T ss_pred EEECHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEEEC---CCEEEEEEECCCCCCHHHHHHCCCC----
T ss_conf 850678999999999721883323578872011325789318999988---9201333541788302435543882----
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC----CEEEEEEECCCC
Q ss_conf 8527878789999999988677540246775310455388----408999412570
Q gi|254780158|r 217 IVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTND----GNVIANEMAPRV 268 (354)
Q Consensus 217 ~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~d----g~i~vnEiaPR~ 268 (354)
..|..+++ +.+++|.|+.++||. ++.+|++|..++ +.++|||++|=|
T Consensus 250 a~~~~l~~----e~~~LA~ka~~a~g~-~v~giDlle~~~r~dw~GL~V~EVN~~~ 300 (321)
T TIGR00768 250 AEPCSLTE----EIEELAIKAAKALGL-DVAGIDLLESKDRDDWGGLLVLEVNANP 300 (321)
T ss_pred CCCCCCCH----HHHHHHHHHHHHHCC-CEEEEEEEECCCCCCCCCCEEEEECCCC
T ss_conf 12452588----999999999999768-3489977662685425783799984997
No 54
>PRK10446 ribosomal protein S6 modification protein; Provisional
Probab=99.86 E-value=6.7e-20 Score=153.86 Aligned_cols=241 Identities=16% Similarity=0.202 Sum_probs=169.5
Q ss_pred EEEEECC-CHH--HHHHHHHHHHCCCEEEEEECCCCCCHHH--CCCEEEECCCCCHHHHHHHHHHCCEEEECC----CCC
Q ss_conf 8999809-898--9999999988797899996767771342--268279878999999999974199999877----222
Q gi|254780158|r 5 TIGIIGG-GQL--ARMLSMSAARLGFCTVILDPDSNCPANQ--VSNQQIAARHDDIKALNTFADICDYATYES----ENI 75 (354)
Q Consensus 5 ~IgIlG~-GqL--~rml~~aA~~lG~~v~v~d~~~~~pa~~--~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~----E~i 75 (354)
+|+||+- ++| .+-|.+||+++|+++.++||..-..... .+..++.+ .. ....|+|..-+ ..-
T Consensus 2 ki~iLs~~~~~yst~RL~eaa~~rGh~v~vidp~~~~~~i~~~~~~v~~~g-----~~----L~~~DavipR~g~~~t~~ 72 (300)
T PRK10446 2 KIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKG-----RK----LPHFDAVIPRIGTAITFY 72 (300)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEHHHCEEEECCCCCEEEECC-----EE----CCCCCEEEECCCCCCCHH
T ss_conf 799993699760799999999987995999614891898248986499898-----08----687888998267774558
Q ss_pred CHHHHHHHHH-CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCCCCCCC
Q ss_conf 1133344430-20034876778763152788888765058867432100068888641001-312554023467555664
Q gi|254780158|r 76 PEKSISYLST-LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGF-KGKGILKTRRLGYDGKGQ 153 (354)
Q Consensus 76 ~~~~l~~l~~-~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~-g~P~vlKp~~~GydGkG~ 153 (354)
....|..++. +++++.++++++.|.||+..-++|+++|+|+|++..+.+.+++.++++.+ |+|+|+||.. |+-|+|+
T Consensus 73 ~~~vLr~lE~~Gv~viN~~~aI~~~~DKl~t~qlL~~~gip~P~T~~~~~~~~~~~~i~~~gg~PvViKpl~-Gs~G~GV 151 (300)
T PRK10446 73 GTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVE-GTQGIGV 151 (300)
T ss_pred HHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECC-CCCCCCE
T ss_conf 999999999889918648999998576999999998759799988983699999999998089978999678-9886036
Q ss_pred CCCCCHHHHHHHHHHC--CCCCEEHHHCCC--CCCCCCCEECCCCCCCEEE----EEC----CCCCCCCCCEEEEEECCC
Q ss_conf 5446746778987513--555010111145--6443320101466541399----705----334543555058985278
Q gi|254780158|r 154 KVYHENDCTQNLYASL--GNVPLILERFTD--FNCEISIIAARSLNGSICF----YDP----IQNTHVNGILHKSIVPAS 221 (354)
Q Consensus 154 ~~i~~~~~l~~~~~~~--~~~~~iiEe~I~--~~~Eisviv~r~~~G~~~~----~p~----~en~~~~gil~~s~~Pa~ 221 (354)
.++++.+.++...+.+ .+..++++|||+ .++.+-|+++ +|++.. .+. .-|.|..|. ..|..
T Consensus 152 ~l~e~~~~~~~i~~~~~~~~~~~~iQeyI~~~~g~D~Rv~vv---gg~vvaam~R~~~~g~~rtN~~~Gg~----~~~~~ 224 (300)
T PRK10446 152 VLAETRQAAESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVV---GDEVVAAIERRAKEGDFRSNLHRGGA----ASVAS 224 (300)
T ss_pred EEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEE---CCEEHHHEEEECCCCCEEEEEECCCE----EEECC
T ss_conf 997378999999998862287377522025557986799999---98624438997378834777703977----65328
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCC
Q ss_conf 78789999999988677540246775310455388408999412570
Q gi|254780158|r 222 ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRV 268 (354)
Q Consensus 222 i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~ 268 (354)
++++.. ++|.+++++||. ++.+|+++.++||. ||+|++.-|
T Consensus 225 l~~e~~----~la~~a~~~lgl-~~~GVDii~~~~g~-~v~EVN~~P 265 (300)
T PRK10446 225 ITPQER----EIAIKAARTMAL-DVAGVDILRANRGP-LVMEVNASP 265 (300)
T ss_pred CCHHHH----HHHHHHHHHHCC-CEEEEEEEEECCCC-EEEEECCCH
T ss_conf 999999----999999998699-68999998828998-899993874
No 55
>COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=7.7e-20 Score=153.47 Aligned_cols=257 Identities=13% Similarity=0.129 Sum_probs=182.7
Q ss_pred CCEEEEECCCH---------HHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf 87899980989---------899999999887978999967677713422682798789999999999741999998772
Q gi|254780158|r 3 KKTIGIIGGGQ---------LARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESE 73 (354)
Q Consensus 3 ~k~IgIlG~Gq---------L~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E 73 (354)
+.|+.|+=||. .+..+..+.+..|+.+.-++.+.+.. ...++. .........|++.+.--
T Consensus 2 ~~~vavl~gG~s~e~eVsl~sa~~v~~~l~~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~vvfp~lh 70 (317)
T COG1181 2 KMKVAVLLGGRSAEREVSLLSAKAVLRALKGFGYDVTPVDITEAGL--WMLDKE---------VTKRVLQKADVVFPVLH 70 (317)
T ss_pred CEEEEEEECCCCCCEEEEEECHHHHHHHHHCCCCEEEEEECCCCCE--EEECCC---------HHHHHHCCCCEEEEECC
T ss_conf 6699998577537306999658999998761487158873246632--785031---------01222026987787155
Q ss_pred --CCCHHHHHHHHH--CCCC-CCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHH----HHHHHHHHCCCCEEEEECC
Q ss_conf --221133344430--2003-487677876315278888876505886743210006----8888641001312554023
Q gi|254780158|r 74 --NIPEKSISYLST--LLPT-YPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQ----ESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 74 --~i~~~~l~~l~~--~~~v-~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~----~el~~~~~~~g~P~vlKp~ 144 (354)
.-...+++.+.+ ++|+ .++..+-..++||...|.+++..|+|+++|..+... ..+.+....++||+++||.
T Consensus 71 G~~gEDg~iqg~le~~giPyvg~gv~~Sa~~mdk~~~K~~~~~~g~~~a~~~~~~~~~~~~~~~e~~~~~l~~p~~Vkp~ 150 (317)
T COG1181 71 GPYGEDGTIQGLLELLGIPYVGKGVLASAGAMDKIVTKRLFKAEGLPVAPYVALTRDEYSSVIVEEVEEGLGFPLFVKPA 150 (317)
T ss_pred CCCCCCCHHHHHHHHHCCCEEECCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEECC
T ss_conf 88888706999999709987607644533235099998899867865123567533452047888774146887899858
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHC--CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCC-CCE--------
Q ss_conf 4675556645446746778987513--55501011114564433201014665413997053345435-550--------
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYASL--GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVN-GIL-------- 213 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~~~--~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~-gil-------- 213 (354)
+.|++ -|...++..+|++.+++.. .+.++++|+|+. .+|+++-+..+.. +...+++.|-.-.+ ..|
T Consensus 151 ~~gSS-vg~~~v~~~~d~~~~~e~a~~~d~~vl~e~~~~-~rei~v~vl~~~~-~~~~l~~~eI~~~~~~fydye~Ky~~ 227 (317)
T COG1181 151 REGSS-VGRSPVNVEGDLQSALELAFKYDRDVLREQGIT-GREIEVGVLGNDY-EEQALPLGEIPPKGEEFYDYEAKYLS 227 (317)
T ss_pred CCEEE-EEEEECCEECCHHHHHHHHHHHCCCCEECCCCC-CCEEEEEECCCCC-CCEECCCCEEECCCCEEEEEECCCCC
T ss_conf 73113-679988350436999999998478512003776-6558986358865-52444761681699869860001457
Q ss_pred ---EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CCEEEEEEECCCCCCCEE
Q ss_conf ---589852787878999999998867754024677531045538-840899941257045604
Q gi|254780158|r 214 ---HKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTN-DGNVIANEMAPRVHNSGH 273 (354)
Q Consensus 214 ---~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~-dg~i~vnEiaPR~Hnsgh 273 (354)
..-..|+++++++.++++++|.++.++|++.|+.+++||++. +|++|+||++|.|=-+.|
T Consensus 228 ~gg~~~~~pa~lt~~~~~~i~~lA~~a~~alg~~g~~rvDf~~~~~~g~~~l~EvNt~PG~t~~ 291 (317)
T COG1181 228 TGGAQYDIPAGLTDEIHEEIKELALRAYKALGCLGLARVDFFVDDDEGEFVLLEVNTNPGMTAM 291 (317)
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCC
T ss_conf 8984353788999889999999999999860888758887999878998999987089987653
No 56
>pfam02655 ATP-grasp_3 ATP-grasp domain. No functional information or experimental verification of function is known in this family. This family appears to be an ATP-grasp domain (Pers. obs. A Bateman).
Probab=99.83 E-value=5.2e-20 Score=154.62 Aligned_cols=155 Identities=15% Similarity=0.213 Sum_probs=113.9
Q ss_pred HHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHH
Q ss_conf 31527888887650588674321000688886410013125540234675556645446746778987513555010111
Q gi|254780158|r 99 SQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASLGNVPLILER 178 (354)
Q Consensus 99 ~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~~~~~~iiEe 178 (354)
+.||+.++++|+++|||||+|..+.+.++ +.+|+|+||+.|+ +|+|++++++.+++.... .++++||
T Consensus 1 A~DK~~t~~~l~~~gip~P~~~~~~~~~~-------~~~P~VvKP~~g~-gs~Gv~~v~~~~~l~~~~-----~~~liqe 67 (160)
T pfam02655 1 ASDKLKTYKALKNAGVPTPETLSAEEPTE-------EEKKYIVKPRDGC-GGEGVRFVENGREDEEFI-----ENVIIQE 67 (160)
T ss_pred CCCHHHHHHHHHHCCCCCCCEEECCCHHH-------CCCCEEEECCCCC-CCCCEEEEECHHHHHHHC-----CCEEEEE
T ss_conf 98989999999987959999986578235-------5998999808989-873189994899986532-----5658874
Q ss_pred CCCCCCCCCCEECCCCCCCEEEEECCCC----CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC-CCCCCCCCEEEE
Q ss_conf 1456443320101466541399705334----54355505898527878789999999988677540-246775310455
Q gi|254780158|r 179 FTDFNCEISIIAARSLNGSICFYDPIQN----THVNGILHKSIVPASISQKTSLLAHSAMRKVLETL-DYVGILCIEFFV 253 (354)
Q Consensus 179 ~I~~~~Eisviv~r~~~G~~~~~p~~en----~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L-~~~Gv~~VEffv 253 (354)
||+ ++|+|+.++.+. |...++...+. ......+.....|+..+ ...++.+++.+++++| ++.|.++|||++
T Consensus 68 ~i~-G~e~sv~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~~G~~~vd~~~ 143 (160)
T pfam02655 68 FIE-GEPLSVSLLSDG-EKALPLSVNRQLIDNAGSGFVYAGNLTPSRTE--LKEELEELAEEVVEALPGLRGYVGVDLVL 143 (160)
T ss_pred EEE-CCEEEEEEEEEC-CEEEEEEEEEEEECCCCCCCCCCCCCEECCCC--CHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 794-442389999989-99999998578851478642103763013758--88999999999999843875648889999
Q ss_pred CCCCEEEEEEECCCCCCC
Q ss_conf 388408999412570456
Q gi|254780158|r 254 TNDGNVIANEMAPRVHNS 271 (354)
Q Consensus 254 ~~dg~i~vnEiaPR~Hns 271 (354)
+. +.+||.||+||..-|
T Consensus 144 ~~-~~~~viEiNpR~s~s 160 (160)
T pfam02655 144 TD-NGPYVIEVNPRITTS 160 (160)
T ss_pred EC-CEEEEEEEECCCCCC
T ss_conf 99-908999996887789
No 57
>KOG0368 consensus
Probab=99.82 E-value=1.7e-18 Score=144.33 Aligned_cols=291 Identities=20% Similarity=0.233 Sum_probs=210.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHCC---------CEEEEE-ECCC---CCCHHHCCCEEEEC-------CCCCHHHHHHHHH
Q ss_conf 78999809898999999998879---------789999-6767---77134226827987-------8999999999974
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLG---------FCTVIL-DPDS---NCPANQVSNQQIAA-------RHDDIKALNTFAD 63 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG---------~~v~v~-d~~~---~~pa~~~ad~~~~~-------~~~D~~~l~~~~~ 63 (354)
++|+|--.|--|.--..+.++.- +++++. .|++ ++--.++||..... .|.+.|-+.+.|+
T Consensus 55 ~kILIAnNGiAAvK~irSiRkWayetF~ner~I~FV~MaTpddl~anaeyIrmADqyvevPgGtNnNNyANVdlIvdiAe 134 (2196)
T KOG0368 55 KRILIANNGIAAVKCIRSIRKWAYETFGNERAIQFVCMATPDDLRANAEYIRMADQYVEVPGGTNNNNYANVDLIVDIAE 134 (2196)
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 78887056588999999999999997387660899996687888766888631011433788888777301899998887
Q ss_pred HC--CEEEEC----CCCCCHHHHHHHHHC--CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC---------------
Q ss_conf 19--999987----722211333444302--0034876778763152788888765058867432---------------
Q gi|254780158|r 64 IC--DYATYE----SENIPEKSISYLSTL--LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--------------- 120 (354)
Q Consensus 64 ~~--Dvit~E----~E~i~~~~l~~l~~~--~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--------------- 120 (354)
+. |+|=.- .||- ..-+.|.+. .-+.|+.++.....||+..--.++.+|+||-||.
T Consensus 135 ~~~VdAVWaGWGHASENP--~LPe~L~~~~IiFiGPP~~aM~sLGDKI~STIvAQsa~vPtlpWSGS~v~~~~~~~~~~~ 212 (2196)
T KOG0368 135 RTDVDAVWAGWGHASENP--ELPERLSANGIIFIGPPASAMRALGDKIASTIIAQSAGVPTLPWSGSGVKVEHIEDKTNL 212 (2196)
T ss_pred HCCCCEEEECCCCCCCCC--CHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCE
T ss_conf 435535761555445684--257889767928988946777763216877898875499721446886314455056762
Q ss_pred -----------CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH----CCCCCEEHHHCCCCCCC
Q ss_conf -----------100068888641001312554023467555664544674677898751----35550101111456443
Q gi|254780158|r 121 -----------EINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYAS----LGNVPLILERFTDFNCE 185 (354)
Q Consensus 121 -----------~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~----~~~~~~iiEe~I~~~~E 185 (354)
.+.+.+|-.++++.+|||+++|+..|| +|||...+.+.||...++.. ..+.|..+-+..+..|.
T Consensus 213 v~Vpedly~Kacv~~~eegLeaae~IGfPvMIKASEGG-GGKGIRkv~n~ddF~~lf~qv~~EvPGSPIFlMK~a~~ARH 291 (2196)
T KOG0368 213 VSVPEDLYEKACVRNVEEGLEAAEKIGFPVMIKASEGG-GGKGIRKVENEDDFKALFKQVQNEVPGSPIFLMKLADQARH 291 (2196)
T ss_pred EECCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCC-CCCCEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCE
T ss_conf 73578986534308888999999862983699954578-97661304566789999999985589995552003367540
Q ss_pred CCCEECCCCCCCEEE-EE---CCCCCCCCCCEEEEEECCCC-CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CCEE
Q ss_conf 320101466541399-70---53345435550589852787-878999999998867754024677531045538-8408
Q gi|254780158|r 186 ISIIAARSLNGSICF-YD---PIQNTHVNGILHKSIVPASI-SQKTSLLAHSAMRKVLETLDYVGILCIEFFVTN-DGNV 259 (354)
Q Consensus 186 isviv~r~~~G~~~~-~p---~~en~~~~gil~~s~~Pa~i-~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~-dg~i 259 (354)
+.|....|+.|+... |. .++..|.. |. --+|+.| +.++.+++++.|.++++-.||++.-+||....+ ||+.
T Consensus 292 lEVQlLaDqYGn~IsLfgRDCSiQRRhQK-II--EEAPatIap~etf~~Me~~AvrLak~VGYvSAGTVEYLYsp~d~~f 368 (2196)
T KOG0368 292 LEVQLLADQYGNVISLFGRDCSIQRRHQK-II--EEAPATIAPPETFKKMEQAAVRLAKLVGYVSAGTVEYLYSPDDGEY 368 (2196)
T ss_pred EEEEHHHHHHCCEEEEECCCCHHHHHHHH-HH--HHCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCCCCE
T ss_conf 21002245308787774366237787778-87--6188541788999999999999987636111336899972589817
Q ss_pred EEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCH
Q ss_conf 99941257045604621001358899999998188999700
Q gi|254780158|r 260 IANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPLGNPN 300 (354)
Q Consensus 260 ~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl~~~~ 300 (354)
||.|++||..=----|.--|+++-=..++...+|+||-.+.
T Consensus 369 yFLELNPRLQVEHP~TEmis~VNlPAaQlQIAMGiPL~~I~ 409 (2196)
T KOG0368 369 YFLELNPRLQVEHPTTEMISDVNLPAAQLQIAMGIPLHRIP 409 (2196)
T ss_pred EEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCH
T ss_conf 99962763024677525551578608999998598510054
No 58
>KOG0237 consensus
Probab=99.82 E-value=1.4e-18 Score=144.99 Aligned_cols=298 Identities=18% Similarity=0.258 Sum_probs=190.7
Q ss_pred EEEEECCCHHHHHHHHHHHHC----CCEEEEEECCCCCCHHHCCCE--EEECCCCCHHHHHHHHHHCC--EEEECCC--C
Q ss_conf 899980989899999999887----978999967677713422682--79878999999999974199--9998772--2
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARL----GFCTVILDPDSNCPANQVSNQ--QIAARHDDIKALNTFADICD--YATYESE--N 74 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~l----G~~v~v~d~~~~~pa~~~ad~--~~~~~~~D~~~l~~~~~~~D--vit~E~E--~ 74 (354)
+|+|||+| ||+.+++ .+| -+.-+.+.|...-.+..-+.. ...++..|.+++..|++.-+ .+.+-.| .
T Consensus 4 ~vLviGsG--gREHal~-wkL~qSp~v~~v~vaPGn~G~a~~~~~~~~~~dI~~~d~~ala~f~~e~~I~lVvvGPE~PL 80 (788)
T KOG0237 4 NVLVIGSG--GREHALA-WKLKQSPKVKKVYVAPGNGGTASGDASKVPNLDISVADFEALASFCKEHNINLVVVGPELPL 80 (788)
T ss_pred EEEEECCC--CHHHHHH-HHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHH
T ss_conf 79997588--4276888-87632875553898369887456751237556557655999999998746218997873265
Q ss_pred CCHHHHHHHHHCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC-EEEEECCCCCCCCCC
Q ss_conf 2113334443020034-87677876315278888876505886743210006888864100131-255402346755566
Q gi|254780158|r 75 IPEKSISYLSTLLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKG-KGILKTRRLGYDGKG 152 (354)
Q Consensus 75 i~~~~l~~l~~~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~-P~vlKp~~~GydGkG 152 (354)
+..-+-.....+++++ |+.++.++-.+|...|.|+.++||||+.|..+++.+++.+++.+.+| ++|+|..-.. -|||
T Consensus 81 ~~Gl~~~l~~~gi~~FGPs~~aAqlE~sK~fsK~fm~r~~IPTA~y~~ft~~e~a~sfi~~~~~~~~ViKAdGLA-AGKG 159 (788)
T KOG0237 81 VAGLADVLRSAGIPCFGPSKQAAQLEASKNFSKDFMHRHNIPTAKYKTFTDPEEAKSFIQSATDKALVIKADGLA-AGKG 159 (788)
T ss_pred HHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCC-CCCC
T ss_conf 423566664058510174377777664178899889863998320264078799899998489856489605524-5771
Q ss_pred CCCCCCHHHHHHHHHHC--------CCCCEEHHHCCCCCCCCCCEECCCCCCCEEE-EECCCCCCC---CCCE------E
Q ss_conf 45446746778987513--------5550101111456443320101466541399-705334543---5550------5
Q gi|254780158|r 153 QKVYHENDCTQNLYASL--------GNVPLILERFTDFNCEISIIAARSLNGSICF-YDPIQNTHV---NGIL------H 214 (354)
Q Consensus 153 ~~~i~~~~~l~~~~~~~--------~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~-~p~~en~~~---~gil------~ 214 (354)
+.+-++.+|.-++.+++ ....+++||+++ +.|+|+++. .+|.... .||.+ .|+ +|+. .
T Consensus 160 Viv~~~~~EA~eAv~sIl~~~~fg~AG~tvViEE~LE-GeEvS~laf--tDG~s~~~mp~aQ-DHKRl~dgD~GpNTGgm 235 (788)
T KOG0237 160 VIVAKSKEEAFEAVDSILVKKVFGSAGKTVVIEELLE-GEEVSFLAF--TDGYSVRPLPPAQ-DHKRLGDGDTGPNTGGM 235 (788)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCC-CCEEEEEEE--ECCCCCCCCCCCC-CHHHHCCCCCCCCCCCC
T ss_conf 5740547999999999985444135664586112307-625789998--5573023388510-02553078999988886
Q ss_pred EEEECCC-CCHHHHHHH-HHHHHHHHHHC-----CCCCCCCCEEEECCCCEEEEEEECCCCCCCEE-EEHHHCCCCHHHH
Q ss_conf 8985278-787899999-99988677540-----24677531045538840899941257045604-6210013588999
Q gi|254780158|r 215 KSIVPAS-ISQKTSLLA-HSAMRKVLETL-----DYVGILCIEFFVTNDGNVIANEMAPRVHNSGH-WTEASCVISQFEQ 286 (354)
Q Consensus 215 ~s~~Pa~-i~~~~~~~a-~~~a~~i~~~L-----~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh-~t~~~~~~sqfe~ 286 (354)
-.++|++ ++++..+.. ..+..+.++.| .|+||+---|++++||.. +.|.+-|--+--- .-+---..+-||.
T Consensus 236 GaY~paPv~s~~ll~~v~~~I~~~Tv~Gm~~eg~~y~GVLfaGlMl~k~~P~-vLEfN~RFGDPEtQv~l~lLesDL~ev 314 (788)
T KOG0237 236 GAYAPAPVASPKLLDTVQSTIIEPTVDGMAEEGIPYVGVLFAGLMLTKDGPK-VLEFNVRFGDPETQVLLPLLESDLAEV 314 (788)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 5565477569899999998876676657876399625687654688359960-799840138920656598787679999
Q ss_pred HHHHHHCCCCCCC--HHCCCEEEEEEEC
Q ss_conf 9999818899970--0048567999755
Q gi|254780158|r 287 HIRSITNLPLGNP--NRHSNCVMYNIIG 312 (354)
Q Consensus 287 h~rai~glpl~~~--~~~~~~~m~nilg 312 (354)
.+- .|.-.|... .-...++|..++.
T Consensus 315 i~a-~~~~~L~~~~i~w~~~sa~~VV~a 341 (788)
T KOG0237 315 ILA-CCNGRLDTVDIVWSKKSAVTVVMA 341 (788)
T ss_pred HHH-HHHCCCCCCCCCCCCCCEEEEEEE
T ss_conf 999-861874556754114614899990
No 59
>COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis]
Probab=99.78 E-value=6.9e-17 Score=133.59 Aligned_cols=250 Identities=13% Similarity=0.172 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCH----HHCCCEEE----ECCCCCHHHH--HHHHHHCCEEEE-CCCCCC--HHH
Q ss_conf 9899999999887978999967677713----42268279----8789999999--999741999998-772221--133
Q gi|254780158|r 13 QLARMLSMSAARLGFCTVILDPDSNCPA----NQVSNQQI----AARHDDIKAL--NTFADICDYATY-ESENIP--EKS 79 (354)
Q Consensus 13 qL~rml~~aA~~lG~~v~v~d~~~~~pa----~~~ad~~~----~~~~~D~~~l--~~~~~~~Dvit~-E~E~i~--~~~ 79 (354)
+-..++..++++.|+++.++++....-. ....-... .....+.... .......|++.. ...+.+ +..
T Consensus 17 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~i~~R~~~~~~~~~~~ 96 (318)
T COG0189 17 DTTFALMEAAQKRGHELAILDDGDLSLRKGEIKALARLVEVGEVIGLHYELIEEEDLSLLDELDVIIMRKDPPFDFATRF 96 (318)
T ss_pred CHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHH
T ss_conf 43999988778607348997165311451336888866532210010124333100222036728997378604568999
Q ss_pred HHHHH-HCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH-HCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 34443-020034876778763152788888765058867432100068888641-0013125540234675556645446
Q gi|254780158|r 80 ISYLS-TLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNIL-GGFKGKGILKTRRLGYDGKGQKVYH 157 (354)
Q Consensus 80 l~~l~-~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~-~~~g~P~vlKp~~~GydGkG~~~i~ 157 (354)
+..++ .++++..+++++..|.||+..-+++...|+|+|++..+.+.++...++ +.+|||+|+||.. |+-|+|+.+++
T Consensus 97 ~~~~E~~G~~viN~p~~i~~~~nK~~~~~~l~~~~ipvP~T~i~~~~~~~~~~~~~~~g~pvVlKp~~-Gs~G~gV~~v~ 175 (318)
T COG0189 97 LRLAERKGVPVINDPQSIRRCRNKLYTTQLLAKAGIPVPPTLITRDPDEAAEFVAEHLGFPVVLKPLD-GSGGRGVFLVE 175 (318)
T ss_pred HHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECC-CCCCCCEEEEC
T ss_conf 99998749868788799876355799999999659999986896584788999997468988996478-88866559943
Q ss_pred CHH-HHHHHHHHCCCC---CEEHHHCCCCCC-CCCCEECCCCCCCEEEEE------CCC----CCCCCCCEEEEEECCCC
Q ss_conf 746-778987513555---010111145644-332010146654139970------533----45435550589852787
Q gi|254780158|r 158 END-CTQNLYASLGNV---PLILERFTDFNC-EISIIAARSLNGSICFYD------PIQ----NTHVNGILHKSIVPASI 222 (354)
Q Consensus 158 ~~~-~l~~~~~~~~~~---~~iiEe~I~~~~-Eisviv~r~~~G~~~~~p------~~e----n~~~~gil~~s~~Pa~i 222 (354)
+.+ ++..+.+.+... .+++++||+..+ ..-.+++ .+|.+..+- .-. |.+..| ...|..+
T Consensus 176 ~~d~~l~~~~e~~~~~~~~~~ivQeyi~~~~~~~rrivv--~~~~~~~~y~~~R~~~~~~~R~N~a~Gg----~~e~~~l 249 (318)
T COG0189 176 DADPELLSLLETLTQEGRKLIIVQEYIPKAKRDDRRVLV--GGGEVVAIYALARIPASGDFRSNLARGG----RAEPCEL 249 (318)
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEE--ECCEEEEEEEEECCCCCCCCEEECCCCC----EECCCCC
T ss_conf 776569999998634556429862034767787399999--8999989871200477775201011575----2045369
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHH
Q ss_conf 8789999999988677540246775310455388408999412570456046210
Q gi|254780158|r 223 SQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEA 277 (354)
Q Consensus 223 ~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~ 277 (354)
++++.+ +|.+++++|| .+..+|+++.+.| ..||+|+++-| +|--+++
T Consensus 250 ~~e~~e----lA~kaa~~lG-l~~~GVDiie~~~-g~~V~EVN~sP--~~~~~i~ 296 (318)
T COG0189 250 TEEEEE----LAVKAAPALG-LGLVGVDIIEDKD-GLYVTEVNVSP--TGKGEIE 296 (318)
T ss_pred CHHHHH----HHHHHHHHHC-CCEEEEEEEEECC-CEEEEEEECCC--CCCCCHH
T ss_conf 999999----9999999748-9479999997089-62999986896--5235214
No 60
>COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only]
Probab=99.70 E-value=1.3e-14 Score=118.26 Aligned_cols=279 Identities=17% Similarity=0.174 Sum_probs=172.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEE-------C---CCCCH---HHHHHHHHHCCEEEE
Q ss_conf 7899980989899999999887978999967677713422682798-------7---89999---999999741999998
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIA-------A---RHDDI---KALNTFADICDYATY 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~-------~---~~~D~---~~l~~~~~~~Dvit~ 70 (354)
.+|+++|-. -|.++.+|.++||+|..++-+.++--...++.++. + .+++. +++.+|++.+|+.+.
T Consensus 12 ~kiLviGvn--tR~vveSA~klGf~V~sv~~y~~~Dl~~~a~~~l~~r~~~~~~rfe~~de~~li~~~~~~~~dvD~~ii 89 (389)
T COG2232 12 CKILVIGVN--TRPVVESASKLGFEVYSVQYYDPADLPGDAISYLRERPGELLGRFENLDEQKLIEAAEDLAEDVDAPII 89 (389)
T ss_pred CEEEEEEEC--CHHHHHHHHHCCEEEEEEEEECCCCCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_conf 438999623--417677877447189986753432366421027884485452765588989999999864453241254
Q ss_pred CCCCCCHHHHHHHHHCC----CC-CCCHH-HHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf 77222113334443020----03-48767-78763152788888765058867432100068888641001312554023
Q gi|254780158|r 71 ESENIPEKSISYLSTLL----PT-YPSSR-AIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTR 144 (354)
Q Consensus 71 E~E~i~~~~l~~l~~~~----~v-~P~~~-al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~ 144 (354)
.+ .....+...+ ++ ..+++ ...-+.+|++.-..++.+|+|.|+-..+.-. ..--.++|+||.
T Consensus 90 ~~-----sg~e~l~~~g~~~~~v~~n~P~~~v~~~snk~~~~r~l~~lgmp~p~~~~~e~~-------~~gekt~IlKPv 157 (389)
T COG2232 90 PF-----SGFEALRTSGELGCEVAGNEPEVKVVEASNKLKFYRKLEVLGMPEPSEKKIEPL-------EEGEKTLILKPV 157 (389)
T ss_pred EC-----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH-------HHCCEEEEEEEC
T ss_conf 03-----553212456754564456782788999888886520101028999704321144-------402101477302
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCC-C---C-----CEEE
Q ss_conf 46755566454467467789875135550101111456443320101466541399705334543-5---5-----5058
Q gi|254780158|r 145 RLGYDGKGQKVYHENDCTQNLYASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHV-N---G-----ILHK 215 (354)
Q Consensus 145 ~~GydGkG~~~i~~~~~l~~~~~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~-~---g-----il~~ 215 (354)
.|| .|- +-++.-.|+.. -.++|+++||+ ++-+|+-+.. +|+-..+ +.-|.|. + + .|.-
T Consensus 158 ~Ga-GG~-~el~~~~Ee~~-------~~~~i~Qefi~-G~p~Svs~is--~g~~a~~-la~N~QiI~~~~~~~~~f~Y~G 224 (389)
T COG2232 158 SGA-GGL-VELVKFDEEDP-------PPGFIFQEFIE-GRPVSVSFIS--NGSDALT-LAVNDQIIDGLRGEYSQFVYKG 224 (389)
T ss_pred CCC-CCE-EEECCCCCCCC-------CCCEEHHHHCC-CCEEEEEEEE--CCCCEEE-EEEEEEEECCCCCCCCCCEECC
T ss_conf 378-860-13100433458-------76600334317-8413799973--5862389-9970022145323344410126
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCC
Q ss_conf 98527878789999999988677540246775310455388408999412570456046210013588999999981889
Q gi|254780158|r 216 SIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLP 295 (354)
Q Consensus 216 s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glp 295 (354)
...|..- +..+++++++..++..|+.+|.-+|+|.++.. ..||.||+||+.-|------+|..+-|+.|++|.-|-=
T Consensus 225 NlTP~~~--~~~ee~e~la~elV~~lgL~GsnGVDfvl~d~-gpyViEVNPR~qGt~e~iE~s~giNl~~lHi~af~G~L 301 (389)
T COG2232 225 NLTPFPY--EEVEEAERLAEELVEELGLVGSNGVDFVLNDK-GPYVIEVNPRIQGTLECIERSSGINLFRLHIQAFDGEL 301 (389)
T ss_pred CCCCCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCC
T ss_conf 7677765--02689999999999984235666610686068-85799956854523788898617778999999845757
Q ss_pred CCCCHHCCCEEEEEEECC
Q ss_conf 997000485679997557
Q gi|254780158|r 296 LGNPNRHSNCVMYNIIGS 313 (354)
Q Consensus 296 l~~~~~~~~~~m~nilg~ 313 (354)
.-.++.. ..+...||-.
T Consensus 302 pEr~kpr-~~a~krILya 318 (389)
T COG2232 302 PERPKPR-GYACKRILYA 318 (389)
T ss_pred CCCCCCC-EEEEEEEEEC
T ss_conf 6777765-3477678864
No 61
>KOG0370 consensus
Probab=99.67 E-value=5.4e-15 Score=120.85 Aligned_cols=296 Identities=13% Similarity=0.094 Sum_probs=217.6
Q ss_pred CCEEEEECCCHH-----------HHHHHHHHHHCCCEEEEEECCCCCC--HHHCCCEEEECCCCCHHHHHHH--HHHCCE
Q ss_conf 878999809898-----------9999999988797899996767771--3422682798789999999999--741999
Q gi|254780158|r 3 KKTIGIIGGGQL-----------ARMLSMSAARLGFCTVILDPDSNCP--ANQVSNQQIAARHDDIKALNTF--ADICDY 67 (354)
Q Consensus 3 ~k~IgIlG~GqL-----------~rml~~aA~~lG~~v~v~d~~~~~p--a~~~ad~~~~~~~~D~~~l~~~--~~~~Dv 67 (354)
.+++.|||+|-| |-.-+.|.++-|++++.+.|+--.. ...+||+.+....+ .+.+... .+++|.
T Consensus 377 ~~kVlvlGSGGLsIGQAGEFDYSGsQAiKAlkEe~i~TiLiNPNIAtvQts~~lAD~vyflpvT-~~~vt~vi~~erPd~ 455 (1435)
T KOG0370 377 VKKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEENIFTILINPNIATVQTSKGLADKVYFLPVT-PEYVTKVIKAERPDG 455 (1435)
T ss_pred CCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECC-HHHHHHHHHHHCCCE
T ss_conf 5179998158733212403554078898765532617999789601000255521289995058-799999988618773
Q ss_pred EEECCC-CCCH----HHHH--HHHH-CCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 998772-2211----3334--4430-20034-876778763152788888765058867432100068888641001312
Q gi|254780158|r 68 ATYESE-NIPE----KSIS--YLST-LLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGK 138 (354)
Q Consensus 68 it~E~E-~i~~----~~l~--~l~~-~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P 138 (354)
+...|+ .... +.-+ .+++ ++++. -+.+++..+.||-+.-+.+++.+.+++++..+++.++..++.+.+|||
T Consensus 456 il~tfggqtaLncgvel~k~gvf~~~~vkvLgt~i~ti~ttedr~lfa~am~ei~e~ia~s~a~~sie~al~aae~l~yp 535 (1435)
T KOG0370 456 ILLTFGGQTALNCGVELDKAGVFAQYGVKVLGTPIQTIITTEDRDLFARALNEINEKIAPSEAVSTIEEALEAAERLGYP 535 (1435)
T ss_pred EEEECCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCH
T ss_conf 78842776544564353002100003415437875521231427889999876315056256676799999888862828
Q ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCE---
Q ss_conf 5540234675556645446746778987513--55501011114564433201014665413997053345435550---
Q gi|254780158|r 139 GILKTRRLGYDGKGQKVYHENDCTQNLYASL--GNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGIL--- 213 (354)
Q Consensus 139 ~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~--~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil--- 213 (354)
+++.... +-.|-|--...+.+++.+..... -...+++|+-+..=+|+..-|+||..+++....-.||.-.=|+-
T Consensus 536 vivRaay-algglgSgfa~n~eeL~~l~~~a~a~s~QilvekSlkGwkevEyevvrDa~~nciTvcnmen~DplgihtGd 614 (1435)
T KOG0370 536 VIVRAAY-ALGGLGSGFANNEEELQDLAAQALALSPQILVEKSLKGWKEVEYEVVRDAYDNCITVCNMENFDPLGIHTGD 614 (1435)
T ss_pred HHHHHHH-HHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCCCEEECCC
T ss_conf 9999999-853766433444899999976431258615422332443434899980200040533577345762010165
Q ss_pred EEEEECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCE-EEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHH
Q ss_conf 58985278-7878999999998867754024677531045538840-899941257045604621001358899999998
Q gi|254780158|r 214 HKSIVPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGN-VIANEMAPRVHNSGHWTEASCVISQFEQHIRSI 291 (354)
Q Consensus 214 ~~s~~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~-i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai 291 (354)
.-+++|+. +|++...-++..|.++.+.||.+|=-.|.+-+.+... -++.|++.|...|.-+---+....-=-.-.+--
T Consensus 615 SiVvapsqtlsd~ey~mlrttaikVirhlgvvGEcniQyaL~p~s~~y~IiEVNarLSrssaLASkaTgypLAy~aAKla 694 (1435)
T KOG0370 615 SIVVAPSQTLSDEEYQMLRTTAIKVIRHLGVVGECNIQYALNPYSLEYRIIEVNARLSRSSALASKATGYPLAYTAAKLA 694 (1435)
T ss_pred EEEEEECCCCCHHHHHHHHHCCHHHEECCCCCCCCCCEEEECCCCEEEEEEEEEEEEEEHHHHHCCCCCCCHHHHHHHHH
T ss_conf 07996142257688999875020211026876656530441666304799998757740134432676675899999870
Q ss_pred HCCCCCCCH
Q ss_conf 188999700
Q gi|254780158|r 292 TNLPLGNPN 300 (354)
Q Consensus 292 ~glpl~~~~ 300 (354)
+|.||++..
T Consensus 695 lg~~lpe~~ 703 (1435)
T KOG0370 695 LGIPLPELK 703 (1435)
T ss_pred CCCCCCCCC
T ss_conf 486034677
No 62
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.59 E-value=2.2e-13 Score=109.92 Aligned_cols=179 Identities=18% Similarity=0.275 Sum_probs=118.6
Q ss_pred CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHHC
Q ss_conf 87677876315278888876505886743210006888864100131255402346755566454-46746778987513
Q gi|254780158|r 91 PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKV-YHENDCTQNLYASL 169 (354)
Q Consensus 91 P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~-i~~~~~l~~~~~~~ 169 (354)
-|+-+..+|+||...|.+++++|+|+|.-..+.+.++..++++++| |+|+||..|- -|||+.+ +.+.++++.+|+..
T Consensus 287 TSAvAms~c~DK~lT~rll~~AG~~VP~~~~~~~~~~~~~fl~~~G-~VVVKP~dGn-qGrGVtvnl~t~eev~~A~~~A 364 (547)
T TIGR03103 287 TSAVAMSLCDDKRLTRRLVSEAGLQVPEQQLAGNGEAVEAFLAEHG-AVVVKPVRGE-QGKGISVDVRTPDDLEAAIAKA 364 (547)
T ss_pred HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC-CEEECCCCCC-CCCCEEECCCCHHHHHHHHHHH
T ss_conf 8899988740499999999973998999745699899999998739-9997768788-8861587259999999999999
Q ss_pred C--CCCEEHHHCCCCCCCCCCEECCC--------------CCCCEEEEECCCCCCCC-----------------------
Q ss_conf 5--55010111145644332010146--------------65413997053345435-----------------------
Q gi|254780158|r 170 G--NVPLILERFTDFNCEISIIAARS--------------LNGSICFYDPIQNTHVN----------------------- 210 (354)
Q Consensus 170 ~--~~~~iiEe~I~~~~Eisviv~r~--------------~~G~~~~~p~~en~~~~----------------------- 210 (354)
. +..+|+|+|++ +.++-++|+-+ .||.-.+-.+++...++
T Consensus 365 ~~~~~~VIVE~fi~-G~D~RlLVIggkVVAAA~R~Pa~VvGDG~sTI~eLIe~qnrrr~~~~g~esrI~lD~~t~~~L~~ 443 (547)
T TIGR03103 365 RQFCDRVLLERYVP-GEDLRLVVIDFEVVAAAVRRPPEVIGDGRSSIRDLIEKQSRRRAAATGGESRIPLDAETERCLAE 443 (547)
T ss_pred HHHCCCEEEEEEEC-CCCEEEEEECCEEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHH
T ss_conf 97599579998406-97169999999999998147967984866209999843057755678997533469999999998
Q ss_pred -CCEEEEEE-------------------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-CC-EEEEEEECCCC
Q ss_conf -55058985-------------------2787878999999998867754024677531045538-84-08999412570
Q gi|254780158|r 211 -GILHKSIV-------------------PASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTN-DG-NVIANEMAPRV 268 (354)
Q Consensus 211 -gil~~s~~-------------------Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~-dg-~i~vnEiaPR~ 268 (354)
|.--.|+. .-++++++--+..++|.++++++|. -+-+|+|.+.. +. .=.|.|++-||
T Consensus 444 qG~tldSVp~~Ge~V~LR~nANLSTGGtaiDVTD~VHPe~~~~A~~AAraIGL-dIaGIDliv~DIs~P~~vIIEvNa~P 522 (547)
T TIGR03103 444 AGLDLDDVLPEGQRLRVRRTANLHTGGTIHDVTEQLHPDLREAAERAARALDI-PVVGIDFLVPDVTGPDYVIIEANERP 522 (547)
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCC-CEEEEEEEECCCCCCCEEEEEECCCC
T ss_conf 49981225888999999426602689851614567698999999999997399-85568998426899981899977896
Q ss_pred CCCEE
Q ss_conf 45604
Q gi|254780158|r 269 HNSGH 273 (354)
Q Consensus 269 Hnsgh 273 (354)
.=.-|
T Consensus 523 GL~nH 527 (547)
T TIGR03103 523 GLANH 527 (547)
T ss_pred CCCCC
T ss_conf 50227
No 63
>PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional
Probab=99.56 E-value=1.3e-12 Score=104.80 Aligned_cols=268 Identities=15% Similarity=0.203 Sum_probs=172.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC-CH--HHCCCEEEECC-CCCHHHHHHHHHHCCEEEE-CCCCCC
Q ss_conf 8878999809898999999998879789999676777-13--42268279878-9999999999741999998-772221
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC-PA--NQVSNQQIAAR-HDDIKALNTFADICDYATY-ESENIP 76 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~-pa--~~~ad~~~~~~-~~D~~~l~~~~~~~Dvit~-E~E~i~ 76 (354)
++-||+.|||- .|...+.-|++-|+++++++..... +- ..++|+.++.+ |.|.-.+.+-...-++|.. .--.+.
T Consensus 17 ~~i~I~tl~SH-SALqIl~GAK~EGF~T~~vc~~gr~~~Y~~f~~~De~iv~d~f~di~~~q~~L~~~NaI~IPhgSfv~ 95 (356)
T PRK13278 17 DNITIATIGSH-SSLQILKGAKKEGFRTIAICEKKREKFYKRFPFADEFIIVDSFSDILEIQEELREMNAIVIPHGSFVA 95 (356)
T ss_pred CCCEEEEEECH-HHHHHHCCHHHCCCCEEEEECCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCEEEECCCCEEE
T ss_conf 45389998442-59888532877399579996699745345477642799947689999999999878969964888589
Q ss_pred HHHHHHHHH-CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 133344430-2003487677876315278888876505886743210006888864100131255402346755566454
Q gi|254780158|r 77 EKSISYLST-LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKV 155 (354)
Q Consensus 77 ~~~l~~l~~-~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~ 155 (354)
.-..+.+++ .+|++-+-..++.-.||..++++|+++|||.|+ .+++.+|+. -|+|+|.. ++-.|||-++
T Consensus 96 Y~G~~~iE~~~VP~FGNR~lLrwEs~r~~~~~lLe~Agi~~Pk--~~~~PeeID-------r~VIVK~~-gAkggrGyF~ 165 (356)
T PRK13278 96 YLGLENVEEFKVPMFGNREILRWESDRDKERKLLEGAGIRIPR--KYEDPEDID-------GPVIVKLP-GAKGGRGYFI 165 (356)
T ss_pred EECHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCE--ECCCHHHCC-------CCEEEEEC-CCCCCCEEEE
T ss_conf 8368888508888205877866510307899999867999871--158955578-------52699746-7777745899
Q ss_pred CCCHHHHHHHHHHC-------CCCCEEHHHCCCC------------CCCCCCEEC--C---CCCCCEEEEECCCCCCCCC
Q ss_conf 46746778987513-------5550101111456------------443320101--4---6654139970533454355
Q gi|254780158|r 156 YHENDCTQNLYASL-------GNVPLILERFTDF------------NCEISIIAA--R---SLNGSICFYDPIQNTHVNG 211 (354)
Q Consensus 156 i~~~~~l~~~~~~~-------~~~~~iiEe~I~~------------~~Eisviv~--r---~~~G~~~~~p~~en~~~~g 211 (354)
.++.+|...-.+.+ +..++.+||||-. ..++.++.+ | +.+|-... |.-+.. +.+
T Consensus 166 a~s~~ef~~k~~~l~~~g~i~d~~~~~IeEyv~G~~~~~~yFySpl~~~lEllg~D~R~esniDg~~rl-Pa~~ql-e~~ 243 (356)
T PRK13278 166 ASSPEEFWEKIDRLKEKGLIEDVEKYIIQEYVVGVPYYIHYFYSPIKNRLELLGIDRRYESNIDGLVRI-PAKDQL-EAG 243 (356)
T ss_pred ECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEHHHCCCCCCCCEEEEECCEEEEECCHHHCCC-CHHHHH-HCC
T ss_conf 579899999999988627545554427999834741231220352006613663100344052232048-878885-368
Q ss_pred C-EEEEE---ECCCCCHHHHHHHHHHHHHHHHHC------CCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCC
Q ss_conf 5-05898---527878789999999988677540------2467753104553884089994125704560462100135
Q gi|254780158|r 212 I-LHKSI---VPASISQKTSLLAHSAMRKVLETL------DYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVI 281 (354)
Q Consensus 212 i-l~~s~---~Pa~i~~~~~~~a~~~a~~i~~~L------~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~ 281 (354)
+ -..+. .|+.+-+.+..++.+++.+.+++- |.+|-|+.|..+|.|.++++=|+++|.---....+.++..
T Consensus 244 ~~p~~vvvGn~p~vlRESLL~~vf~~ge~fV~a~k~l~~PG~iGPFcLq~vvt~~le~vvFevS~RIv~GTn~~~~gSPY 323 (356)
T PRK13278 244 IDPTYVVTGNIPLVLRESLLPQVFEYGERFVEASKELVGPGMIGPFCLESVITDDLEIVVFEISARIVAGTNLYMNGSPY 323 (356)
T ss_pred CCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 99846998885324417657999999999999999746998634543668986986099999854313898876579986
Q ss_pred C
Q ss_conf 8
Q gi|254780158|r 282 S 282 (354)
Q Consensus 282 s 282 (354)
|
T Consensus 324 s 324 (356)
T PRK13278 324 S 324 (356)
T ss_pred C
T ss_conf 1
No 64
>TIGR02068 cya_phycin_syn cyanophycin synthetase; InterPro: IPR011810 Cyanophycin is an insoluble storage polymer for carbon, nitrogen, and energy, found in most Cyanobacteria. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. The polymer is made by this enzyme, cyanophycin synthetase, and degraded by cyanophycinase. Heterologously expressed cyanophycin synthetase in Escherichia coli produces a closely related, water-soluble polymer with some Arg replaced by Lys. It is unclear whether enzymes that produce soluble cyanophycin-like polymers in vivo in non-Cyanobacterial species should be designated as cyanophycin synthetase itself or as a related enzyme. Cyanophycin synthesis is analogous to polyhydroxyalkanoic acid (PHA) biosynthesis, except that PHA polymers lack nitrogen and may be made under nitrogen-limiting conditions .; GO: 0005524 ATP binding, 0016874 ligase activity, 0009059 macromolecule biosynthetic process.
Probab=99.53 E-value=1.5e-14 Score=117.88 Aligned_cols=99 Identities=19% Similarity=0.296 Sum_probs=86.8
Q ss_pred CHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHHC
Q ss_conf 767787631527888887650588674321000688886410013-1255402346755566454-46746778987513
Q gi|254780158|r 92 SSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFK-GKGILKTRRLGYDGKGQKV-YHENDCTQNLYASL 169 (354)
Q Consensus 92 ~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g-~P~vlKp~~~GydGkG~~~-i~~~~~l~~~~~~~ 169 (354)
|.=+..+++||.++|++|+++|+|+|.-..+.+.+|+.++++.+| ||+|+||.. |.-|||+.+ +++.++++.|++..
T Consensus 209 s~iav~iA~DK~lTK~iL~~~GvPVP~G~~~~~~~~a~~aa~~~GG~PvViKP~D-Gn~GrGv~~ni~~r~e~e~AY~~A 287 (876)
T TIGR02068 209 SAIAVEIACDKDLTKKILKAAGVPVPEGTVVQSAEEAWEAAEDLGGYPVVIKPYD-GNHGRGVTINIETRDEIESAYEAA 287 (876)
T ss_pred CEEEHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC-CCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 5010122236378999998478988887366778999999997189968995177-998743784077748899999999
Q ss_pred C--C--CCEEHHHCCCCCCCCCCEECC
Q ss_conf 5--5--501011114564433201014
Q gi|254780158|r 170 G--N--VPLILERFTDFNCEISIIAAR 192 (354)
Q Consensus 170 ~--~--~~~iiEe~I~~~~Eisviv~r 192 (354)
. + ..+|||.|+. ++++-|+|+-
T Consensus 288 ~~~Sk~~~ViVEr~i~-G~dhRlLVVg 313 (876)
T TIGR02068 288 KEESKTSEVIVERYIK-GRDHRLLVVG 313 (876)
T ss_pred HHCCCCCEEEEEEEEC-CCCEEEEEEC
T ss_conf 8607866068987642-7623899998
No 65
>COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only]
Probab=99.50 E-value=3.8e-12 Score=101.63 Aligned_cols=249 Identities=15% Similarity=0.081 Sum_probs=158.1
Q ss_pred HHHHHHH----HHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCE---EEECCCCCCHHHHHHHHHC-
Q ss_conf 9999999----9887978999967677713422682798789999999999741999---9987722211333444302-
Q gi|254780158|r 15 ARMLSMS----AARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDY---ATYESENIPEKSISYLSTL- 86 (354)
Q Consensus 15 ~rml~~a----A~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dv---it~E~E~i~~~~l~~l~~~- 86 (354)
||||-.+ -.+.|+++.-...-.+ |...+.-+.+..+ -.+.+.+-.++||+ |.+|.+.+-......+++.
T Consensus 23 G~aMlesll~~F~~~~ve~y~~~~f~~-~~ig~~f~s~~~~--~~~~~ek~le~~Da~LvIAPEdd~lLy~Ltri~E~~~ 99 (307)
T COG1821 23 GRAMLESLLRAFAKSGVEVYETLTFAD-PSIGVRFKSTADD--VLRDEEKALEKADATLVIAPEDDGLLYSLTRIYEEYV 99 (307)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCC-CCCCEEEECCHHH--HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 899999999999855945998603326-6665113204367--8899999875288469980476771899999999876
Q ss_pred CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 00348767787631527888887650588674321000688886410013125540234675556645446746778987
Q gi|254780158|r 87 LPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLY 166 (354)
Q Consensus 87 ~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~ 166 (354)
.++-+|++|++.|.||++.-..+++. +++|+.+.. ...+-..|+||+.+ -.|.|.....+..|+
T Consensus 100 ~nLG~S~~Ai~v~aDK~lty~aLr~a-V~~p~t~e~----------~~~~~k~ViKp~dg-Cgge~i~~~~~~pd~---- 163 (307)
T COG1821 100 ENLGCSPRAIRVAADKRLTYKALRDA-VKQPPTREW----------AEEPKKYVIKPADG-CGGEGILFGRDFPDI---- 163 (307)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCC----------CCCCCEEEECCCCC-CCCCEEECCCCCCCH----
T ss_conf 75089777876751089899988411-248885535----------56785688622556-775102046777521----
Q ss_pred HHCCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCC----CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 513555010111145644332010146654139970533454----3555058985278787899999999886775402
Q gi|254780158|r 167 ASLGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTH----VNGILHKSIVPASISQKTSLLAHSAMRKVLETLD 242 (354)
Q Consensus 167 ~~~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~----~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~ 242 (354)
+|++|||+ +..+||... .|+... |+.-|.| -+.-+.+.-.+++++.++.+++.+.|.+.++-++
T Consensus 164 -------~i~qEfIe-G~~lSVSL~---~GEkv~-pLsvNrQfi~~~~~~~~y~gg~~pi~he~k~~~~~~Ai~aVeci~ 231 (307)
T COG1821 164 -------EIAQEFIE-GEHLSVSLS---VGEKVL-PLSVNRQFIIFAGSELVYNGGRTPIDHELKREAFEEAIRAVECIP 231 (307)
T ss_pred -------HHHHHHCC-CCCEEEEEE---CCCCCC-CCEECHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf -------66787437-761489985---587344-302322321001423443367678881788999999999997402
Q ss_pred -CCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCC
Q ss_conf -467753104553884089994125704560462100135889999999818899
Q gi|254780158|r 243 -YVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPL 296 (354)
Q Consensus 243 -~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl 296 (354)
+.|-++|+..+. | +.|+.||+|||.-+--=--....-|-=++.++...|--+
T Consensus 232 Gl~GYVGVDlVls-D-~pYvIEINpR~TTp~vg~sr~~~~sv~~LLl~~~~g~~~ 284 (307)
T COG1821 232 GLNGYVGVDLVLS-D-EPYVIEINPRPTTPTVGLSRVTPESVAELLLEGPTGKVL 284 (307)
T ss_pred CCCCEEEEEEEEC-C-CCEEEEECCCCCCCEEEEECCCCHHHHHHHHCCCCCCCC
T ss_conf 5554266789964-9-857999468777643432014617799998528556655
No 66
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=99.45 E-value=2e-11 Score=96.78 Aligned_cols=268 Identities=16% Similarity=0.204 Sum_probs=171.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC-CCCHHH--CC-CEEEECCCCCH---HHHHHHHHHCCEEEECCCCCC
Q ss_conf 789998098989999999988797899996767-771342--26-82798789999---999999741999998772221
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDS-NCPANQ--VS-NQQIAARHDDI---KALNTFADICDYATYESENIP 76 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~-~~pa~~--~a-d~~~~~~~~D~---~~l~~~~~~~Dvit~E~E~i~ 76 (354)
-||+.+||-- |......|++-|+++++++... .-+-.+ ++ +..++.+|.|. +-..++.+.--++++.-..+.
T Consensus 19 i~Iat~gSHS-aL~Il~GAK~EGF~Ti~v~~~gr~~~Y~~f~~a~e~i~v~~f~dil~~~iqe~L~~~n~I~IP~gSfv~ 97 (361)
T COG1759 19 ITIATIGSHS-ALQILDGAKEEGFRTIAVCQRGREKPYEKFPVADEVIIVDKFSDILNEEIQEELRELNAIFIPHGSFVA 97 (361)
T ss_pred EEEEEEECCH-HHHHHHHHHHCCCCEEEEEECCCCCHHHHCCHHHEEEEECHHHHHHHHHHHHHHHHCCEEEECCCCEEE
T ss_conf 6999851504-788863377608727999835762367650202348895204777648999999875849942786478
Q ss_pred HHHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
Q ss_conf 133344430--200348767787631527888887650588674321000688886410013125540234675556645
Q gi|254780158|r 77 EKSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQK 154 (354)
Q Consensus 77 ~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~ 154 (354)
.-..+.+++ .+|.+-+-..++.-.|+..++.+|+++||+.|+ .+++.+|+. -|+|+|.. ++-.|||-+
T Consensus 98 Y~G~d~ie~~~~vP~fGnR~lLrwE~~~~~~~~lLekAgi~~P~--~~~~PeeId-------r~ViVK~p-gAkggRGyF 167 (361)
T COG1759 98 YVGYDGIENEFEVPMFGNRELLRWEEDRKLEYKLLEKAGLRIPK--KYKSPEEID-------RPVIVKLP-GAKGGRGYF 167 (361)
T ss_pred EECCHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCC--CCCCHHHCC-------CCEEEECC-CCCCCCEEE
T ss_conf 85314464411466116676753000335689999974999885--669967868-------73698557-766774379
Q ss_pred CCCCHHHHHHHHHHCCC---------CCEEHHHCCCC------------CCCCCCEEC--C---CCCCCEEEEECCCCCC
Q ss_conf 44674677898751355---------50101111456------------443320101--4---6654139970533454
Q gi|254780158|r 155 VYHENDCTQNLYASLGN---------VPLILERFTDF------------NCEISIIAA--R---SLNGSICFYDPIQNTH 208 (354)
Q Consensus 155 ~i~~~~~l~~~~~~~~~---------~~~iiEe~I~~------------~~Eisviv~--r---~~~G~~~~~p~~en~~ 208 (354)
+.++.+|..+-.+.+-. ..+.+||||-. ..++.++.+ | +.+|-.+. |.-+...
T Consensus 168 iA~s~eef~ek~erl~~~gvi~~Edlkna~IeEYv~G~~f~~~yFyS~i~~~lEl~g~D~R~Esn~Dg~~Rl-Pa~~ql~ 246 (361)
T COG1759 168 IASSPEEFYEKAERLLKRGVITEEDLKNARIEEYVVGAPFYFHYFYSPIKDRLELLGIDRRYESNLDGLVRL-PAKDQLE 246 (361)
T ss_pred EECCHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEEECCCEEEEEEECCCCCCEEEEEEEHHEECCCHHHCCC-CHHHHHH
T ss_conf 976989999999999872876534432135447750660134552023457045763002013162121157-8789974
Q ss_pred CCCCEEEEE---ECCCCCHHHHHHHHHHHHHHHHHC------CCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHC
Q ss_conf 355505898---527878789999999988677540------24677531045538840899941257045604621001
Q gi|254780158|r 209 VNGILHKSI---VPASISQKTSLLAHSAMRKVLETL------DYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASC 279 (354)
Q Consensus 209 ~~gil~~s~---~Pa~i~~~~~~~a~~~a~~i~~~L------~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~ 279 (354)
-+=.-.++. .|+.+-+.+..++.+++.+.+++- |.+|-|+.|..+|.|-+++|=|++||.---...++.+.
T Consensus 247 l~~~ptyvv~Gn~p~vlRESLL~~vfe~ger~V~a~kel~~PG~iGpFcLq~i~t~dl~~vVFevS~Ri~gGTNv~~~Gs 326 (361)
T COG1759 247 LNLEPTYVVVGNIPVVLRESLLPKVFEMGERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMGGS 326 (361)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 58995289987851324777789999999999999987459985132002001468751899997531047766555898
Q ss_pred CCCH
Q ss_conf 3588
Q gi|254780158|r 280 VISQ 283 (354)
Q Consensus 280 ~~sq 283 (354)
..|-
T Consensus 327 pYs~ 330 (361)
T COG1759 327 PYSN 330 (361)
T ss_pred CCHH
T ss_conf 6422
No 67
>PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional
Probab=99.43 E-value=3.5e-11 Score=95.15 Aligned_cols=269 Identities=15% Similarity=0.147 Sum_probs=168.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC-CCHHH---CCCEEEECC-CCCH--HHHHHHHHHCCEEE-ECCC
Q ss_conf 887899980989899999999887978999967677-71342---268279878-9999--99999974199999-8772
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN-CPANQ---VSNQQIAAR-HDDI--KALNTFADICDYAT-YESE 73 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~-~pa~~---~ad~~~~~~-~~D~--~~l~~~~~~~Dvit-~E~E 73 (354)
++=||+.|||- .|...+.-|++-|+++++++.... -+-.+ ++|++++.+ |.|. +.+.+-...-++|. +.--
T Consensus 13 ~~i~I~tlgSH-SALqIl~GAK~EGF~Tv~vc~kgRe~~Y~~f~~~~De~iv~d~f~di~~~~~q~~L~~~NaI~IPhgS 91 (363)
T PRK13277 13 DKVKIGVLASH-SALDVLDGAKDEGFRTIAVCQRGRERTYREFKGIVDEVIVLDKFKDILSEEIQEELREENAIFVPNRS 91 (363)
T ss_pred CCCEEEEEECH-HHHHHHCCHHHCCCCEEEEECCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCC
T ss_conf 45479998442-59888544877399479995798752477555778469995557777548999999878979964888
Q ss_pred CCCHHHHHHHHH--CCCCCCCHHHHHHHHCCHHHH---HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 221133344430--200348767787631527888---887650588674321000688886410013125540234675
Q gi|254780158|r 74 NIPEKSISYLST--LLPTYPSSRAIEISQDRLYEK---KFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGY 148 (354)
Q Consensus 74 ~i~~~~l~~l~~--~~~v~P~~~al~~~~dK~~~K---~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~Gy 148 (354)
.+..-..+.+++ .+|++-+-..++.- .|..+| .+|+++|||.|+ .+++.+|+. -|+|+|.. ++-
T Consensus 92 fv~Y~G~d~iE~~~~VP~FGNR~lLrwE-er~~~~~~~~LLe~Agi~~Pk--~~~~PeeID-------r~VIVK~~-gAk 160 (363)
T PRK13277 92 FAVYVGYDAIENEFPVPIFGNRYLLRWE-ERTGEKNYYRLLEKAGIPRPR--TFKPPEEID-------RPVIVKLP-EAK 160 (363)
T ss_pred EEEEECHHHHHCCCCCCEECCHHHHHHC-CCCHHHHHHHHHHHCCCCCCC--CCCCHHHCC-------CCEEEEEC-CCC
T ss_conf 4677448888506888711475663223-451167899999867999870--059966678-------52699745-677
Q ss_pred C--CCCCCCCCCHHHHHHHHHHC---------CCCCEEHHHCCCC------------CCCCCCEEC--C---CCCCCEEE
Q ss_conf 5--56645446746778987513---------5550101111456------------443320101--4---66541399
Q gi|254780158|r 149 D--GKGQKVYHENDCTQNLYASL---------GNVPLILERFTDF------------NCEISIIAA--R---SLNGSICF 200 (354)
Q Consensus 149 d--GkG~~~i~~~~~l~~~~~~~---------~~~~~iiEe~I~~------------~~Eisviv~--r---~~~G~~~~ 200 (354)
. |||-++.++.+|..+-.+.+ +-.++.+||||-. ..++.++.+ | +.+|-...
T Consensus 161 g~~grGyF~a~s~~ef~~k~~~li~~G~I~~e~l~~~~IeEyv~G~~~~~~fFySpl~~~lEllgiD~R~esniDg~~rl 240 (363)
T PRK13277 161 RRLERGFFIAASYKDFYEKSERLIKQGVIDREDLEKARIEEYVIGAHFNFNYFYSPIRDRVELLGIDRRIQSNLDGFVRL 240 (363)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCEEEECHHHHHCC
T ss_conf 87763589967989999999999875875722144437899843764665210253237503663111024141444239
Q ss_pred EECCCCCCCCCCEEEEE---ECCCCCHHHHHHHHHHHHHHHHHC------CCCCCCCCEEEECCCCEEEEEEECCCCCCC
Q ss_conf 70533454355505898---527878789999999988677540------246775310455388408999412570456
Q gi|254780158|r 201 YDPIQNTHVNGILHKSI---VPASISQKTSLLAHSAMRKVLETL------DYVGILCIEFFVTNDGNVIANEMAPRVHNS 271 (354)
Q Consensus 201 ~p~~en~~~~gil~~s~---~Pa~i~~~~~~~a~~~a~~i~~~L------~~~Gv~~VEffv~~dg~i~vnEiaPR~Hns 271 (354)
|.-+...-+-....+. .|+.+-+.+..++.+++.+.+++- |.+|-|+.|..+|.|.++++=|+++|.--.
T Consensus 241 -pA~~Ql~~~~~p~~vvvGn~p~vlRESLL~~vf~~ge~fV~ask~l~~pG~iGPFcLq~ivt~dle~vvFevS~RI~gG 319 (363)
T PRK13277 241 -PAPQQLKLNEEPRYIEVGHEPATIRESLLEKVFDMGEKFVEATKELYPPGIIGPFTLQTIVTPDLDFVVYDVAPRIGGG 319 (363)
T ss_pred -CHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCC
T ss_conf -8678841689984599888532431765799999999999999974699861443356898588609999984421488
Q ss_pred EEEEHH-HCCCCH
Q ss_conf 046210-013588
Q gi|254780158|r 272 GHWTEA-SCVISQ 283 (354)
Q Consensus 272 gh~t~~-~~~~sq 283 (354)
-...+. +...|.
T Consensus 320 tN~~~~~gsPYs~ 332 (363)
T PRK13277 320 TNVYMGVGSPYSK 332 (363)
T ss_pred CCCCCCCCCCCHH
T ss_conf 7762479999635
No 68
>COG3919 Predicted ATP-grasp enzyme [General function prediction only]
Probab=99.38 E-value=8e-11 Score=92.74 Aligned_cols=273 Identities=19% Similarity=0.176 Sum_probs=164.7
Q ss_pred CCCCEEEEECCC--HHHHHHHHHHHHCCCEEEEEECCCCCCH-HHCCCEEEECCCCCH----HHHHHHHHHCC---EEEE
Q ss_conf 988789998098--9899999999887978999967677713-422682798789999----99999974199---9998
Q gi|254780158|r 1 MKKKTIGIIGGG--QLARMLSMSAARLGFCTVILDPDSNCPA-NQVSNQQIAARHDDI----KALNTFADICD---YATY 70 (354)
Q Consensus 1 M~~k~IgIlG~G--qL~rml~~aA~~lG~~v~v~d~~~~~pa-~~~ad~~~~~~~~D~----~~l~~~~~~~D---vit~ 70 (354)
|.+.-|.||||. -|| |+.+.....+-|..+..+.-.|. .+++...+.-...+. .-|.+|+++.. .+..
T Consensus 1 ~~~PgviilGgahgtla--lARSfg~~~vpv~~ls~d~plPt~Sr~vr~t~~w~gphd~gaiafLrd~Aekhglkg~LLv 78 (415)
T COG3919 1 EFQPGVIILGGAHGTLA--LARSFGEEFVPVLALSADGPLPTYSRIVRVTTHWNGPHDEGAIAFLRDFAEKHGLKGYLLV 78 (415)
T ss_pred CCCCCEEEECCCCHHHH--HHHHHCCCCCEEEEEECCCCCCCHHHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 98786699746501689--8876140125179984698886444431010004899852099999998761476735999
Q ss_pred ---CCCC-CCHHHHHHHHHCCCC-CCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf ---7722-211333444302003-48767787631527888887650588674321000688886410013125540234
Q gi|254780158|r 71 ---ESEN-IPEKSISYLSTLLPT-YPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRR 145 (354)
Q Consensus 71 ---E~E~-i~~~~l~~l~~~~~v-~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~ 145 (354)
+-|. +-....+.|.....| +|....++-.-+|-..-+...++|+|.|+.+.++|..|.. +..+-||+|+||.-
T Consensus 79 a~GDgev~lvSq~reeLSa~f~v~lp~w~~l~wlceKPllY~ra~elgl~~P~Ty~v~S~~d~~--~~el~FPvILKP~m 156 (415)
T COG3919 79 ACGDGEVLLVSQYREELSAFFEVPLPDWALLRWLCEKPLLYNRAEELGLPYPKTYLVNSEIDTL--VDELTFPVILKPGM 156 (415)
T ss_pred ECCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCHHHHH--HHHEEEEEEECCCC
T ss_conf 6388306625756999988765778738999998608288888998199976067723144321--23144038861788
Q ss_pred CCC-CCCCC---CCCCCHHHHHHHH----HHCCCCCEEHHHCCCCCCCC--CCEECCCCCCC-EEEE---ECCCCCCCCC
Q ss_conf 675-55664---5446746778987----51355501011114564433--20101466541-3997---0533454355
Q gi|254780158|r 146 LGY-DGKGQ---KVYHENDCTQNLY----ASLGNVPLILERFTDFNCEI--SIIAARSLNGS-ICFY---DPIQNTHVNG 211 (354)
Q Consensus 146 ~Gy-dGkG~---~~i~~~~~l~~~~----~~~~~~~~iiEe~I~~~~Ei--sviv~r~~~G~-~~~~---p~~en~~~~g 211 (354)
+|+ .-.++ ..+.+.++.+.++ +..+...+++++|||.+-|- |.-+.-+ +|. +.-| +..|. -.+-
T Consensus 157 gg~~~~~araKa~~a~d~ee~k~a~~~a~eeigpDnvvvQe~IPGGgE~qfsyaAlw~-~g~pvaeftarr~rqy-Pvdf 234 (415)
T COG3919 157 GGSVHFEARAKAFTAADNEEMKLALHRAYEEIGPDNVVVQEFIPGGGENQFSYAALWD-KGHPVAEFTARRLRQY-PVDF 234 (415)
T ss_pred CCCCEEEHHHHEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHH-CCCCHHHHHCCHHHCC-CCCC
T ss_conf 8751001010014316779999999998874399725887705799822320988985-7983464423422218-8654
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC-CCCEEEEEEECCCCCC-CEEEEHHHCCCCH
Q ss_conf 5058985278787899999999886775402467753104553-8840899941257045-6046210013588
Q gi|254780158|r 212 ILHKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVT-NDGNVIANEMAPRVHN-SGHWTEASCVISQ 283 (354)
Q Consensus 212 il~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~-~dg~i~vnEiaPR~Hn-sgh~t~~~~~~sq 283 (354)
-+..+. +.+.+ .+++.+.++++++..++.|+..|||-.+ .||..-+.||+|||-. +|..|..+.+..-
T Consensus 235 gytst~--vevvD--n~Q~i~aar~~L~si~htGlvevefK~D~RDGs~KlldvNpRpw~wfgl~taaG~nLg~ 304 (415)
T COG3919 235 GYTSTV--VEVVD--NQQVIQAARDFLESIEHTGLVEVEFKYDPRDGSYKLLDVNPRPWRWFGLVTAAGYNLGR 304 (415)
T ss_pred CCCCEE--EEECC--CHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCC
T ss_conf 645279--99528--28999999999986312554789987568777246776258873045477404545301
No 69
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional
Probab=99.35 E-value=5.7e-11 Score=93.73 Aligned_cols=97 Identities=18% Similarity=0.218 Sum_probs=77.6
Q ss_pred HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCCCC---HHHHHHHHHH
Q ss_conf 6778763152788888765058867432100068888641001-31255402346755566454467---4677898751
Q gi|254780158|r 93 SRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGF-KGKGILKTRRLGYDGKGQKVYHE---NDCTQNLYAS 168 (354)
Q Consensus 93 ~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~-g~P~vlKp~~~GydGkG~~~i~~---~~~l~~~~~~ 168 (354)
.-+.-+..||...|+.|+++|+|||....+++.+++.++...+ +-|+|+||.+..| |.|+.+.+. .++.+.|++.
T Consensus 481 y~~~limenk~vtK~vl~~~g~~vp~g~~~~~~~~a~~~~~~~~~k~ivvKpkstn~-g~gi~if~~~~~~~~~~~A~~~ 559 (753)
T PRK02471 481 YISPLIMENKVVTKKILAEAGFPVPAGDEFTSLEEALADYSLFEDKAIVVKPKSTNF-GLGISIFKEVASLEDYQKALEI 559 (753)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHCCCCEEECCCCCCC-CCCEEEECCCCCHHHHHHHHHH
T ss_conf 576898841199999999859989998740789999999998679966868077778-7765983489998999999999
Q ss_pred C--CCCCEEHHHCCCCCCCCCCEEC
Q ss_conf 3--5550101111456443320101
Q gi|254780158|r 169 L--GNVPLILERFTDFNCEISIIAA 191 (354)
Q Consensus 169 ~--~~~~~iiEe~I~~~~Eisviv~ 191 (354)
. .+..+|||+||+ ++|+.++|+
T Consensus 560 af~~d~~VlVE~~i~-G~dyR~lVI 583 (753)
T PRK02471 560 AFKEDSSVLVEEFIV-GTEYRFFVL 583 (753)
T ss_pred HHHCCCEEEEEEEEC-CCCEEEEEE
T ss_conf 985698189997316-870699999
No 70
>PRK06524 biotin carboxylase-like protein; Validated
Probab=99.16 E-value=5.1e-10 Score=87.33 Aligned_cols=206 Identities=14% Similarity=0.174 Sum_probs=153.8
Q ss_pred CCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 034876778763152788888765058867432--10006888864100--13125540234675556645446746778
Q gi|254780158|r 88 PTYPSSRAIEISQDRLYEKKFFQESGLTTVDFY--EINSQESLTNILGG--FKGKGILKTRRLGYDGKGQKVYHENDCTQ 163 (354)
Q Consensus 88 ~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~--~v~s~~el~~~~~~--~g~P~vlKp~~~GydGkG~~~i~~~~~l~ 163 (354)
-.+|+++.-..+.+|..+-++.+++|+|..|+. .+.+.++|.+..+. +|--+|+-+.-| -+|+..+-++++.|.+
T Consensus 115 v~~P~a~LR~~ldsKi~t~Rlgn~AGvpsVPnvl~~v~sY~~L~~~~~~aglG~DLVvQt~~G-dsG~tTFFi~~e~D~~ 193 (480)
T PRK06524 115 VMHPPAELRHRLDSKIVMTRLADEAGVPSVPHVIGRVDSYEELSALAHEAGLGDDLVVQTAYG-DAGSTTFFVRGERDWD 193 (480)
T ss_pred EECCHHHHHHHHCCEEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEECCCC-CCCCEEEEEECHHHHH
T ss_conf 755829999774361146752111588767630003566999999988708886358842567-8874169972565676
Q ss_pred HHHHHC-CCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEEC-CC-------CCCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 987513-5550101111456443320101466541399705-33-------45435550589852787878999999998
Q gi|254780158|r 164 NLYASL-GNVPLILERFTDFNCEISIIAARSLNGSICFYDP-IQ-------NTHVNGILHKSIVPASISQKTSLLAHSAM 234 (354)
Q Consensus 164 ~~~~~~-~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~-~e-------n~~~~gil~~s~~Pa~i~~~~~~~a~~~a 234 (354)
.....+ +..++=|-+-|+ -++.++-++-..+|.++- |. +| +.++.|=|---+.|.-+++.+.++|++++
T Consensus 194 k~a~eIvge~eiKiMKRI~-~~~~aiEac~T~~GTivg-P~MTelvGf~ELTPykGgWCGNei~~~~~~p~~r~kare~~ 271 (480)
T PRK06524 194 KYAGEIVGQPEIKVMKRIR-NVEVCIEACVTRHGTVIG-PAMTSLVGYPELTPYRGAWCGNDIWRGALPPAQTRAAREMV 271 (480)
T ss_pred HHHHHHHCCCHHHHHHHHC-CCCCCEEEEECCCCEEEC-HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 7577640663153443424-764111122003873632-46775428411676677643554550228913669999999
Q ss_pred HHHHHHC---CCCCCCCCEEEECC-CCEEEEEEECCCCCCCE----EEEHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 8677540---24677531045538-84089994125704560----462100135889999999818899
Q gi|254780158|r 235 RKVLETL---DYVGILCIEFFVTN-DGNVIANEMAPRVHNSG----HWTEASCVISQFEQHIRSITNLPL 296 (354)
Q Consensus 235 ~~i~~~L---~~~Gv~~VEffv~~-dg~i~vnEiaPR~Hnsg----h~t~~~~~~sqfe~h~rai~glpl 296 (354)
.++.+.| ||.|.|.++|.++. ++++|+-|++||..-.- |-+-.-+..--|--|+---++.+.
T Consensus 272 ~k~Gd~L~~eGYrGyFevDfLiD~dt~evyLGElNPRisGAS~mTN~~a~AyaD~PLFLFHLLE~~~v~y 341 (480)
T PRK06524 272 AKLGDVLSREGYRGYFEVDLLHDLDADELYLGEVNPRLSGASPMTNLTTEAYADMPLFLFHLLEYMDVDY 341 (480)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCC
T ss_conf 9987998744566358999988557784754036764448886403566774498479999999808973
No 71
>TIGR01016 sucCoAbeta succinyl-CoA synthetase, beta subunit; InterPro: IPR005809 There are four different enzymes that share a similar catalytic mechanism which involves the phosphorylation by ATP (or GTP) of a specific histidine residue in the active site. These enzymes are: ATP citrate-lyase (4.1.3.8 from EC) , the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues, catalyzes the formation of acetyl-CoA and oxaloacetate from citrate and CoA with the concomitant hydrolysis of ATP to ADP and phosphate. ATP-citrate lyase is a tetramer of identical subunits; Succinyl-CoA ligase (GDP-forming) (6.2.1.4 from EC) is a mitochondrial enzyme that catalyzes the substrate level phosphorylation step of the tricarboxylic acid cycle: the formation of succinyl-CoA from succinate with a concomitant hydrolysis of GTP to GDP and phosphate. This enzyme is a dimer composed of an alpha and a beta subunits; Succinyl-CoA ligase (ADP-forming) (6.2.1.5 from EC) is a bacterial enzyme that during aerobic metabolism functions in the citric acid cycle, coupling the hydrolysis of succinyl-CoA to the synthesis of ATP. It can also function in the other direction for anabolic purposes. This enzyme is a tetramer composed of two alpha and two beta subunits; and Malate-CoA ligase (6.2.1.9 from EC) (malyl-CoA synthetase) , is a bacterial enzyme that forms malyl-CoA from malate and CoA with the concomitant hydrolysis of ATP to ADP and phosphate. Malate-CoA ligase is composed of two different subunits. This entry corresponds to a conserved region located in the first half of ATP citrate lyase and in the beta subunits of succinyl-CoA ligases and malate-CoA ligase. ; GO: 0003824 catalytic activity, 0008152 metabolic process.
Probab=98.99 E-value=1.7e-08 Score=77.13 Aligned_cols=209 Identities=20% Similarity=0.231 Sum_probs=132.9
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCCCCCC----CCCCCCHHHHHHHHHHCCC------
Q ss_conf 7888887650588674321000688886410013-1255402346755566----4544674677898751355------
Q gi|254780158|r 103 LYEKKFFQESGLTTVDFYEINSQESLTNILGGFK-GKGILKTRRLGYDGKG----QKVYHENDCTQNLYASLGN------ 171 (354)
Q Consensus 103 ~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g-~P~vlKp~~~GydGkG----~~~i~~~~~l~~~~~~~~~------ 171 (354)
+..|++|++.|||+|++..++|.+|+...+.+.| .++|+|.=.. ..||| +.+++|.+|+..+-+.+-+
T Consensus 6 YqAK~if~~YGiPvp~g~v~~s~~e~~~~~~~~g~~~~VvKaQVh-aGGRGKAGGv~~a~s~ee~~~~a~~llg~~l~t~ 84 (389)
T TIGR01016 6 YQAKEIFAKYGIPVPEGEVATSVEEVEEIAEELGEGKVVVKAQVH-AGGRGKAGGVKVAKSKEEALKAAEKLLGKELKTF 84 (389)
T ss_pred HHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCEEEEEEEE-ECCCCCCCCEEEEECHHHHHHHHHHHHCCEEEEE
T ss_conf 558999984789678860041678999999970799789998773-2671121576897087999999998708915786
Q ss_pred ---------CCEEHHHCCCCCCCC--CCEECCCCCCCEEEEEC-----CC---CCCCCCCEEEEEECC------------
Q ss_conf ---------501011114564433--20101466541399705-----33---454355505898527------------
Q gi|254780158|r 172 ---------VPLILERFTDFNCEI--SIIAARSLNGSICFYDP-----IQ---NTHVNGILHKSIVPA------------ 220 (354)
Q Consensus 172 ---------~~~iiEe~I~~~~Ei--sviv~r~~~G~~~~~p~-----~e---n~~~~gil~~s~~Pa------------ 220 (354)
..+++|+.++.+||+ |+++-|+...-+-...- +| ..+.+.|.+.++-|.
T Consensus 85 Qt~~~g~~VnkiliE~~~~I~kEyY~s~v~DR~~~~pv~maS~eGGvdIEEvA~~~Pe~I~k~~idp~~~~~pYq~R~~a 164 (389)
T TIGR01016 85 QTDPLGQPVNKILIEEKIDIDKEYYLSIVIDRSAKKPVIMASTEGGVDIEEVAEKSPEKIIKVAIDPLTGLLPYQARELA 164 (389)
T ss_pred ECCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHH
T ss_conf 40788863447873267741200147799980478717997067784178995219571688871777777878999999
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHCCCCCCCCCE---EEECCCCEEEEEEECCCCCCCEEE---E-HHHCCCCHHHHHHHH
Q ss_conf ---878789999999988677540246775310---455388408999412570456046---2-100135889999999
Q gi|254780158|r 221 ---SISQKTSLLAHSAMRKVLETLDYVGILCIE---FFVTNDGNVIANEMAPRVHNSGHW---T-EASCVISQFEQHIRS 290 (354)
Q Consensus 221 ---~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VE---ffv~~dg~i~vnEiaPR~Hnsgh~---t-~~~~~~sqfe~h~ra 290 (354)
.++.+...+..++..++.+.+--.=+-=|| +.+|+||+|+..-=--..-+.+.| - .+-...||=++.=+-
T Consensus 165 ~~~~l~~~~~~~~~~i~~~Ly~~F~e~Da~L~EINPLViT~~G~L~alDAKl~~DDnALFRH~~l~~~~D~~~~~~~e~~ 244 (389)
T TIGR01016 165 KKLGLEGELIKQVASIIKKLYQIFLEKDASLVEINPLVITKDGNLVALDAKLTIDDNALFRHPDLEEMEDYTQEDQLEVE 244 (389)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCEEEEEEECCCCCCHHCCCCCHHHHCCCCCCCHHHHH
T ss_conf 97089705778899999999998875371025452636878988899833224465510067116876388877733799
Q ss_pred HHCCCCCCCHHCCC-EEEEEEEC
Q ss_conf 81889997000485-67999755
Q gi|254780158|r 291 ITNLPLGNPNRHSN-CVMYNIIG 312 (354)
Q Consensus 291 i~glpl~~~~~~~~-~~m~nilg 312 (354)
...+-|.-+.+-.+ +.|+|=-|
T Consensus 245 A~~~gL~Yv~LdGnIGc~vNGAG 267 (389)
T TIGR01016 245 AKQLGLNYVKLDGNIGCMVNGAG 267 (389)
T ss_pred HHHHCCCEEEECCCEEEECCCHH
T ss_conf 98618836885477079704356
No 72
>PRK05246 glutathione synthetase; Provisional
Probab=98.91 E-value=4e-08 Score=74.55 Aligned_cols=248 Identities=14% Similarity=0.155 Sum_probs=143.7
Q ss_pred EEEEECC--------CHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCE-EEECCCCC------HHHHHHHHHHCCE
Q ss_conf 8999809--------89899999999887978999967677713--422682-79878999------9999999741999
Q gi|254780158|r 5 TIGIIGG--------GQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQ-QIAARHDD------IKALNTFADICDY 67 (354)
Q Consensus 5 ~IgIlG~--------GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~-~~~~~~~D------~~~l~~~~~~~Dv 67 (354)
+|+++.. .-....|+++|++.|+++..++|..-.-- .-.|.- .+...... .+...--....|+
T Consensus 3 ki~f~mDpie~l~~~kDTT~~Lm~eAq~rGhev~~~~p~dL~~~~~~v~a~~~~v~~~~~~~~~~~~~~~~~~~L~~fD~ 82 (316)
T PRK05246 3 KVAFIMDPIESINIKKDSTFAMMLEAQRRGHELFYYEPDDLSLRGGEVRARARPLTVRDDKGDWYELGEEQRLPLADFDV 82 (316)
T ss_pred EEEEEECCHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCEEEEEEEEEEECCCCCCCEEECCCEECCHHHCCE
T ss_conf 79999689787799887299999999987998999972756998999999999999815888747941515513001989
Q ss_pred EEECC------CCC-CHHHHHHHH-HCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 99877------222-113334443-0200348767787631527888887650588674321000688886410013125
Q gi|254780158|r 68 ATYES------ENI-PEKSISYLS-TLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKG 139 (354)
Q Consensus 68 it~E~------E~i-~~~~l~~l~-~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~ 139 (354)
|-.=- +-+ .+..|+.++ +++.|..+|.+++.+.+|+..-+|-+- +|+.....+.+++.++++..+ .+
T Consensus 83 V~mRkDPPfD~~Yi~~T~lLe~~~~~gv~ViN~P~~IR~~nEKL~~l~F~~~----iP~TlVt~~~~~i~~F~~~~~-~i 157 (316)
T PRK05246 83 ILMRKDPPFDMEYIYATYLLERAERAGTLVVNKPQSLRDANEKLFTLWFPEL----MPPTLVTRDKAEIRAFRAEHG-DI 157 (316)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHH----CCCEEEECCHHHHHHHHHHHC-CE
T ss_conf 9992699997688899999985153870897698998642647888740644----899357378999999999738-78
Q ss_pred EEECCCCCCCCCCCCCCCC-HHHHHHHHHHC---CCCCEEHHHCCCC--CCCCCCEECCCCCCCEEEE----ECCC----
Q ss_conf 5402346755566454467-46778987513---5550101111456--4433201014665413997----0533----
Q gi|254780158|r 140 ILKTRRLGYDGKGQKVYHE-NDCTQNLYASL---GNVPLILERFTDF--NCEISIIAARSLNGSICFY----DPIQ---- 205 (354)
Q Consensus 140 vlKp~~~GydGkG~~~i~~-~~~l~~~~~~~---~~~~~iiEe~I~~--~~Eisviv~r~~~G~~~~~----p~~e---- 205 (354)
|+||. .|+.|+|++++.. ...+..+++.+ +..++++++|++- +....++++ +|+..-+ -|.+
T Consensus 158 VlKPL-~g~gG~gV~~i~~~d~n~~~i~e~~t~~~~~~v~vQ~yl~ei~~GDkRiilv---~G~~ig~a~~R~p~~gdfR 233 (316)
T PRK05246 158 ILKPL-DGMGGAGIFRVKADDPNLGVILETLTEQGRRPVMAQRYLPEIKEGDKRILLV---DGEPVGYALARIPAGGETR 233 (316)
T ss_pred EEEEC-CCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEHHHCCCCCEEEEEE---CCEEEHHEEEECCCCCCCE
T ss_conf 99975-6889840899777862389999999745873689886512436898799999---9999114688326788611
Q ss_pred -CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC--CCCEEEECCCCEEEEEEEC-CCCCCCEEEEH
Q ss_conf -45435550589852787878999999998867754024677--5310455388408999412-57045604621
Q gi|254780158|r 206 -NTHVNGILHKSIVPASISQKTSLLAHSAMRKVLETLDYVGI--LCIEFFVTNDGNVIANEMA-PRVHNSGHWTE 276 (354)
Q Consensus 206 -n~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv--~~VEffv~~dg~i~vnEia-PR~Hnsgh~t~ 276 (354)
|.|..| +..+..+++...+-+.+++..+.+ .|+ -+|++. |. |+.||+ .-| ||.-.+
T Consensus 234 ~Nl~~Gg----~~~~~~lt~~~~~i~~~i~p~L~~----~gl~f~GiDvi----g~-~ltEINVTSP--tgl~ei 293 (316)
T PRK05246 234 GNLAAGG----RGEATPLTERDREICAAIGPELKE----RGLIFVGIDVI----GD-YLTEINVTSP--TGIREI 293 (316)
T ss_pred EEEECCC----EEEEECCCHHHHHHHHHHHHHHHH----CCCEEEEEEEE----CC-EEEEEECCCC--HHHHHH
T ss_conf 3230598----026716998999999999999998----79889999753----78-2689936895--459999
No 73
>PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional
Probab=98.82 E-value=1.4e-07 Score=70.88 Aligned_cols=124 Identities=16% Similarity=0.191 Sum_probs=85.5
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE-EEEECC--CCCC-CCCCCCCCCCHHHHHHHHHHCCC------
Q ss_conf 2788888765058867432100068888641001312-554023--4675-55664544674677898751355------
Q gi|254780158|r 102 RLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGK-GILKTR--RLGY-DGKGQKVYHENDCTQNLYASLGN------ 171 (354)
Q Consensus 102 K~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P-~vlKp~--~~Gy-dGkG~~~i~~~~~l~~~~~~~~~------ 171 (354)
-+..|++|++.|||+|++..+.+.+|+.++++++++| +|+|.- .||= -|-|+.++++++++......+-+
T Consensus 5 EyqaKell~~~gIpvp~g~v~~~~~ea~~~~~~l~~~~~VvKAQV~aGGRGKaGGVk~~~s~~ea~~~a~~ilg~~lvT~ 84 (388)
T PRK00696 5 EYQAKELLAEYGVPVPRGYVAFTPEEAVEAAEELGGPVWVVKAQVHAGGRGKAGGVKVAKSKEEVRAAAEEILGKDLVTH 84 (388)
T ss_pred HHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEE
T ss_conf 89999999986998999737799999999999829995899980545888868607990899999999999856774210
Q ss_pred ---------CCEEHHHCCCCCCCC--CCEECCCCCCCEEEEEC-----CCCC---CCCCCEEEEEECCC-CCHH
Q ss_conf ---------501011114564433--20101466541399705-----3345---43555058985278-7878
Q gi|254780158|r 172 ---------VPLILERFTDFNCEI--SIIAARSLNGSICFYDP-----IQNT---HVNGILHKSIVPAS-ISQK 225 (354)
Q Consensus 172 ---------~~~iiEe~I~~~~Ei--sviv~r~~~G~~~~~p~-----~en~---~~~gil~~s~~Pa~-i~~~ 225 (354)
..+++|+.++..+|+ |+++-|+..+-+..+.. +|.+ +.+.|.+..+-|.. +++.
T Consensus 85 QTg~~G~~V~~vlvee~~~i~~E~Ylsi~~DR~~~~~~~i~S~~GG~dIEevA~~~Pe~I~k~~idp~~gl~~~ 158 (388)
T PRK00696 85 QTGPEGQPVNRLLIEEGADIAKELYLSAVVDRATRRVVFMASTEGGMEIEEVAEETPEKIHKVAVDPLVGLQPY 158 (388)
T ss_pred CCCCCCCEEEEEEEEECCCHHHHEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHEEEEECCCCCCCCHH
T ss_conf 15888844479998751661240689999864778579999888798799986529123899975777798999
No 74
>pfam08442 ATP-grasp_2 ATP-grasp domain.
Probab=98.80 E-value=1e-07 Score=71.87 Aligned_cols=157 Identities=20% Similarity=0.237 Sum_probs=98.6
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC-EEEEECC--CCCC-CCCCCCCCCCHHHHHHHHHHCCC-------
Q ss_conf 78888876505886743210006888864100131-2554023--4675-55664544674677898751355-------
Q gi|254780158|r 103 LYEKKFFQESGLTTVDFYEINSQESLTNILGGFKG-KGILKTR--RLGY-DGKGQKVYHENDCTQNLYASLGN------- 171 (354)
Q Consensus 103 ~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~-P~vlKp~--~~Gy-dGkG~~~i~~~~~l~~~~~~~~~------- 171 (354)
+..|++|++.|||+|++..+++.+++.++++++|. |+|+|+- .||- .|-|+.++++.+++..+...+-+
T Consensus 5 yqaK~ll~~~gIpvp~g~~~~~~~ea~~~~~~l~~~~~VvKaQv~aGGRGKaGGVk~~~~~~ea~~~a~~~lg~~l~T~Q 84 (202)
T pfam08442 5 YQAKEILAKYGVPVPRGEVAFSPEEAEEIAKKLGGKVYVVKAQVLAGGRGKAGGVKLAKSPEEAKEAAKEMLGKNLVTKQ 84 (202)
T ss_pred HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEE
T ss_conf 89999999859989991596999999999998099869998742358887677389978999999999987297787550
Q ss_pred --------CCEEHHHCCCCCCCC--CCEECCCCCCCEEEEEC-----CCCC---CCCCCEEEEEECCC-CCHHHHHHHHH
Q ss_conf --------501011114564433--20101466541399705-----3345---43555058985278-78789999999
Q gi|254780158|r 172 --------VPLILERFTDFNCEI--SIIAARSLNGSICFYDP-----IQNT---HVNGILHKSIVPAS-ISQKTSLLAHS 232 (354)
Q Consensus 172 --------~~~iiEe~I~~~~Ei--sviv~r~~~G~~~~~p~-----~en~---~~~gil~~s~~Pa~-i~~~~~~~a~~ 232 (354)
..+++|+.++..+|+ |+++-|...+-+.++.. +|.+ +.+.|....+-|.. +++...+++
T Consensus 85 Tg~~G~~V~~vlvee~~~i~~E~Ylsi~~DR~~~~~~ii~S~~GG~dIEeVa~~~Pe~I~k~~id~~~gl~~~~~r~~-- 162 (202)
T pfam08442 85 TGPEGKPVNKVLVEEAVDIAREYYLSIVLDRASRGPVVIASSEGGVDIEEVAAKNPEAIIKVPIDPAKGLTPYQAREI-- 162 (202)
T ss_pred CCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEECCCCCCHHHHHCCCHHHEEEEEECCCCCCCHHHHHHH--
T ss_conf 278896233899985154010079999975777844789726788509997300955729997187879899999999--
Q ss_pred HHHHHHHHCCCCCCC----------CCEEEECCCCEEEEEEECCCC
Q ss_conf 988677540246775----------310455388408999412570
Q gi|254780158|r 233 AMRKVLETLDYVGIL----------CIEFFVTNDGNVIANEMAPRV 268 (354)
Q Consensus 233 ~a~~i~~~L~~~Gv~----------~VEffv~~dg~i~vnEiaPR~ 268 (354)
+..||..|-. --.+|+..|-.+ .||+|=+
T Consensus 163 -----~~~lg~~~~~~~~~~~~i~~Ly~~f~~~Da~l--lEINPLV 201 (202)
T pfam08442 163 -----AFKLGLEGELVKQAADIIKKLYKLFVEYDATL--VEINPLV 201 (202)
T ss_pred -----HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCE--EEECCCC
T ss_conf -----99849998999999999999999999669828--9756887
No 75
>PRK12458 glutathione synthetase; Provisional
Probab=98.77 E-value=6e-07 Score=66.64 Aligned_cols=227 Identities=15% Similarity=0.163 Sum_probs=127.8
Q ss_pred HHHHHHHCCCEEEEEECCCCCCH----HHCCCEEEEC-CCCCHHHHHHH------------HHHCCEEEECCCCCCHH--
Q ss_conf 99999887978999967677713----4226827987-89999999999------------74199999877222113--
Q gi|254780158|r 18 LSMSAARLGFCTVILDPDSNCPA----NQVSNQQIAA-RHDDIKALNTF------------ADICDYATYESENIPEK-- 78 (354)
Q Consensus 18 l~~aA~~lG~~v~v~d~~~~~pa----~~~ad~~~~~-~~~D~~~l~~~------------~~~~Dvit~E~E~i~~~-- 78 (354)
|+++|+++|+++..+.+..-+-- ...+...... .+...+....+ ....|+|-. .-+-|.+
T Consensus 22 lm~eA~~RGhev~~~~~~dL~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~D~I~m-RkDPPfD~~ 100 (349)
T PRK12458 22 LAHEAVNRGHEVAYMTPGDLTMRDDEAIAFCAVTVKGLKYKTPENFLSFLQGKEFKKARLPLAGFDVLFL-RNNPSLDNL 100 (349)
T ss_pred HHHHHHHCCCEEEEEECCCEEEECCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEECCHHHCCEEEE-ECCCCCCCC
T ss_conf 9999998699899995682699899789998886215544563024555542134404365656989999-489999831
Q ss_pred -----------HH-HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC-CEEEEECCC
Q ss_conf -----------33-44430200348767787631527888887650588674321000688886410013-125540234
Q gi|254780158|r 79 -----------SI-SYLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFK-GKGILKTRR 145 (354)
Q Consensus 79 -----------~l-~~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g-~P~vlKp~~ 145 (354)
.+ ....+++.|..+|.+++-+-.|+..-+|-+ .-+|+...-.+.+++.+++++.. -.+|+||.
T Consensus 101 yln~~~yi~~~~l~~~~~~gv~VIN~P~slR~~nEKL~~~~Fp~---~i~P~TLVT~d~~~I~~F~~~~k~~~iIlKPL- 176 (349)
T PRK12458 101 ARPWADSVGIIFGRLAMRDGVLVLNDPDGLRIANNKLYFQSFPE---EVRPTTHISRNREEIRAFLEESPSDKMILKPL- 176 (349)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCHHHHHHCCC---CCCCCEEEECCHHHHHHHHHHCCCCCEEEEEC-
T ss_conf 26599999999998765089889818599861701200641555---47987798679999999999815883898646-
Q ss_pred CCCCCCCCCCCCCHH--HHHHHHHHCC-CCCEEHHHCCCC----CCCCCCEECCCCCCCEEEE--------E-CCC----
Q ss_conf 675556645446746--7789875135-550101111456----4433201014665413997--------0-533----
Q gi|254780158|r 146 LGYDGKGQKVYHEND--CTQNLYASLG-NVPLILERFTDF----NCEISIIAARSLNGSICFY--------D-PIQ---- 205 (354)
Q Consensus 146 ~GydGkG~~~i~~~~--~l~~~~~~~~-~~~~iiEe~I~~----~~Eisviv~r~~~G~~~~~--------p-~~e---- 205 (354)
.|+.|+|+++++..+ .+..+++.+. .+.+++++|+|- |+- |+.+ +|+..-| . |.+
T Consensus 177 ~G~GG~gIf~i~~~d~~Nl~~I~e~~~~~~~vm~Q~flpei~~GDkR--Iili---nGepi~~~~~~gal~RiP~~gd~R 251 (349)
T PRK12458 177 QGSGGQGVFLIEKSAESNLNQILEFYSGDGYVIAQEYIPGAEEGDVR--ILML---NGEPLERDGRYAAMRRVPAEGDVR 251 (349)
T ss_pred CCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCCHHCCCCCEE--EEEE---CCEEECCCCCEEEEECCCCCCCHH
T ss_conf 78888763886357434199999997048819999210034168869--9999---999911445413565356676135
Q ss_pred -CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEC
Q ss_conf -454355505898527878789999999988677540246775310455388408999412
Q gi|254780158|r 206 -NTHVNGILHKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMA 265 (354)
Q Consensus 206 -n~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEia 265 (354)
|.|..|. ..+..+++...+-+..++..+.+ .|++=|-.=+-++ |+.||+
T Consensus 252 ~Nl~~GG~----~~~~~Lt~~d~~I~~~i~p~L~~----~gl~fvGiDvIG~---~LtEIN 301 (349)
T PRK12458 252 SNIHAGGT----VVKHTLTKEELELCEHIRPKLVR----DGLFFVGLDIVGD---KLIEVN 301 (349)
T ss_pred HHHHCCCC----CCCCCCCHHHHHHHHHHHHHHHH----CCCEEEEEEEECC---CEEEEC
T ss_conf 56526886----30368899999999999999998----7998999986178---456881
No 76
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion]
Probab=98.64 E-value=6.9e-07 Score=66.24 Aligned_cols=202 Identities=19% Similarity=0.211 Sum_probs=121.8
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC-CEEEEECCCC-CCCCC--CCCCCCCHHHHHHHHHHCCC------
Q ss_conf 27888887650588674321000688886410013-1255402346-75556--64544674677898751355------
Q gi|254780158|r 102 RLYEKKFFQESGLTTVDFYEINSQESLTNILGGFK-GKGILKTRRL-GYDGK--GQKVYHENDCTQNLYASLGN------ 171 (354)
Q Consensus 102 K~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g-~P~vlKp~~~-GydGk--G~~~i~~~~~l~~~~~~~~~------ 171 (354)
-+..|++|.+.|||+|+.+.+.+.+++.++..++| .|+|+|+-.. |--|| |+.++++.+++..+.+.+-+
T Consensus 5 EYqaKelf~~~GiPvp~g~v~~s~eea~~~a~~lg~~~~VvKaQV~aGGRGKaGGVk~~~s~~ea~~~a~~~lg~~~q~~ 84 (387)
T COG0045 5 EYQAKELFAKYGIPVPPGYVATSPEEAEEAAKELGGGPVVVKAQVHAGGRGKAGGVKLAKSPEEAKEAAEEILGKNYQTD 84 (387)
T ss_pred HHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCC
T ss_conf 88899899972998999545408999999999818996799922530576666766883898999999999848665457
Q ss_pred ------CCEEHHHCCCCC-CCC--CCEECCCCCCCEEEEECC------CC---CCCCCCEEEEEECCC-CCHHHHHHHHH
Q ss_conf ------501011114564-433--201014665413997053------34---543555058985278-78789999999
Q gi|254780158|r 172 ------VPLILERFTDFN-CEI--SIIAARSLNGSICFYDPI------QN---THVNGILHKSIVPAS-ISQKTSLLAHS 232 (354)
Q Consensus 172 ------~~~iiEe~I~~~-~Ei--sviv~r~~~G~~~~~p~~------en---~~~~gil~~s~~Pa~-i~~~~~~~a~~ 232 (354)
..+++|+++++. +|+ |++..|+.. ...+.-.. |. .+.+.|.+.++-|.. +++...+
T Consensus 85 ~~G~~v~~vlvee~~~~~~~E~Ylsiv~DR~~~-~p~~~~S~eGGmDIEeVa~~~PekI~~~~idp~~g~~~~~aR---- 159 (387)
T COG0045 85 IKGEPVNKVLVEEAVDIIKKEYYLSIVLDRSSR-RPVLMASTEGGMDIEEVAEKTPEKIVKVSVDPLTGLRPYQAR---- 159 (387)
T ss_pred CCCCEEEEEEEEECCCCCCCEEEEEEEEECCCC-CEEEEEECCCCCCHHHHHHHCHHHEEEEEECCCCCCCHHHHH----
T ss_conf 688454289997467776433799999973778-379999667795189950028345268974776687877999----
Q ss_pred HHHHHHHHCCCCCC--------C--CCEEEECCCCEEEEEEECCCCCCC-E-E-------EEHH------------HCCC
Q ss_conf 98867754024677--------5--310455388408999412570456-0-4-------6210------------0135
Q gi|254780158|r 233 AMRKVLETLDYVGI--------L--CIEFFVTNDGNVIANEMAPRVHNS-G-H-------WTEA------------SCVI 281 (354)
Q Consensus 233 ~a~~i~~~L~~~Gv--------~--~VEffv~~dg~i~vnEiaPR~Hns-g-h-------~t~~------------~~~~ 281 (354)
+++..|+..|- + --+.|+..|=.++ ||+|=+-.. | . .+++ -...
T Consensus 160 ---~la~~lgl~~~~~~~~~~ii~~ly~~f~~~Da~lv--EINPLvvt~~~g~v~aLDaKi~~DdnAlfRHp~~~~~~d~ 234 (387)
T COG0045 160 ---ELAFKLGLEGELVKQVADIIKKLYKLFVEKDATLV--EINPLVVTPDGGDVLALDAKITLDDNALFRHPDLAELRDE 234 (387)
T ss_pred ---HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE--EEECCEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHCC
T ss_conf ---99997499878999999999999999997587678--7525088179980899764540367643468344555323
Q ss_pred CHHHHHHHHHHCCCCCCCHHCCC-EEEEEEECC
Q ss_conf 88999999981889997000485-679997557
Q gi|254780158|r 282 SQFEQHIRSITNLPLGNPNRHSN-CVMYNIIGS 313 (354)
Q Consensus 282 sqfe~h~rai~glpl~~~~~~~~-~~m~nilg~ 313 (354)
||.+.--..-.+..|.-+.+-.. +.|.|=-|-
T Consensus 235 ~~ed~~e~~a~~~~l~yV~LdG~IG~ivNGAGL 267 (387)
T COG0045 235 SEEDPREAEASGYGLNYVELDGNIGCIVNGAGL 267 (387)
T ss_pred CCCCHHHHHHHHCCCCEEEECCCEEEEECCHHH
T ss_conf 335855787612787518863837899627269
No 77
>pfam02955 GSH-S_ATP Prokaryotic glutathione synthetase, ATP-grasp domain.
Probab=98.63 E-value=4.3e-07 Score=67.62 Aligned_cols=132 Identities=17% Similarity=0.261 Sum_probs=84.4
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHH-HHHHHHHHC---CCCCEEHHHCCCC--CCCCCCE
Q ss_conf 674321000688886410013125540234675556645446746-778987513---5550101111456--4433201
Q gi|254780158|r 116 TVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHEND-CTQNLYASL---GNVPLILERFTDF--NCEISII 189 (354)
Q Consensus 116 t~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~-~l~~~~~~~---~~~~~iiEe~I~~--~~Eisvi 189 (354)
+|+.....+.+++.++++..| .+|+||.. |+.|+|+.++++.+ .+...++.+ +..+++++|||+. +.++.|+
T Consensus 12 ~P~T~vt~~~~~i~~f~~~~g-~vVvKPl~-Gs~G~GV~~i~~~~~~~~~i~e~~~~~~~~~ii~QeyI~~~~~gD~Rv~ 89 (176)
T pfam02955 12 IPPTLVTRDKEEIRAFLEEHG-DIILKPLD-GMGGAGVFRIKKDDPNLNVILETLTQYGRRPVMAQRYLPEIKEGDKRIL 89 (176)
T ss_pred CCCEEEECCHHHHHHHHHHCC-CEEEEECC-CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEE
T ss_conf 869479889999999999779-89999578-8887675995478355899999998468883986431376789976999
Q ss_pred ECCCCCCCEEE-E-E-CCC-----CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC--CCCEEEECCCCEE
Q ss_conf 01466541399-7-0-533-----45435550589852787878999999998867754024677--5310455388408
Q gi|254780158|r 190 AARSLNGSICF-Y-D-PIQ-----NTHVNGILHKSIVPASISQKTSLLAHSAMRKVLETLDYVGI--LCIEFFVTNDGNV 259 (354)
Q Consensus 190 v~r~~~G~~~~-~-p-~~e-----n~~~~gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv--~~VEffv~~dg~i 259 (354)
++ +|++.. + . +.. |.+..| +..+..++++..+-+..++ ++|.-.|+ .+|++. .+
T Consensus 90 vi---~g~~v~a~~R~~~~g~~r~Nl~~Gg----~~~~~~lt~~~~~ia~~~a----~~l~~~Gl~faGVDii--g~--- 153 (176)
T pfam02955 90 LV---NGEPIGALARIPAEGEFRGNLAAGG----RGEATELTERDREICETIG----PKLKERGLFFVGLDVI--GD--- 153 (176)
T ss_pred EE---CCEEEEEEEEECCCCCCEEEECCCC----EEECCCCCHHHHHHHHHHH----HHHHHCCCEEEEEEEE--CC---
T ss_conf 99---9999899998547985214402698----0005789999999999999----9999869979999984--79---
Q ss_pred EEEEEC
Q ss_conf 999412
Q gi|254780158|r 260 IANEMA 265 (354)
Q Consensus 260 ~vnEia 265 (354)
|+.||+
T Consensus 154 ~l~EVN 159 (176)
T pfam02955 154 YLTEIN 159 (176)
T ss_pred EEEEEE
T ss_conf 088995
No 78
>pfam05770 Ins134_P3_kin Inositol 1, 3, 4-trisphosphate 5/6-kinase. This family consists of several inositol 1, 3, 4-trisphosphate 5/6-kinase proteins. Inositol 1,3,4-trisphosphate is at a branch point in inositol phosphate metabolism. It is dephosphorylated by specific phosphatases to either inositol 3,4-bisphosphate or inositol 1,3-bisphosphate. Alternatively, it is phosphorylated to inositol 1,3,4,6-tetrakisphosphate or inositol 1,3,4,5-tetrakisphosphate by inositol trisphosphate 5/6-kinase.
Probab=98.34 E-value=9.9e-05 Score=51.71 Aligned_cols=236 Identities=13% Similarity=0.140 Sum_probs=132.8
Q ss_pred CCEEEEECCCH-----HHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCH
Q ss_conf 87899980989-----8999999998879789999676777134226827987899999999997419999987722211
Q gi|254780158|r 3 KKTIGIIGGGQ-----LARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPE 77 (354)
Q Consensus 3 ~k~IgIlG~Gq-----L~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~ 77 (354)
..+||-.-.-- .-..+..-|++-|+.++.+|.+..- ..|---..+.-..+|.+-...+-
T Consensus 7 ~~~VGYal~~kK~~~f~~~~f~~~~~~~gi~~v~ID~~~pL-~~QGPfDvilHKltd~~~~~~l~--------------- 70 (307)
T pfam05770 7 RYLVGYALAEKKIKSFIQPSLAELARKRGIDLVQLDPSRPL-SEQGPFDIIIHKLTDKEWRHRLE--------------- 70 (307)
T ss_pred EEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCH-HHCCCCEEEEEECCHHHHHHHHH---------------
T ss_conf 36999998779988874799999897679679987899984-55498269999656289999999---------------
Q ss_pred HHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHC-------CCCCCCCCCCCH-HHHHHHHHH--CCCCEEEEECC-
Q ss_conf 33344430--200348767787631527888887650-------588674321000-688886410--01312554023-
Q gi|254780158|r 78 KSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQES-------GLTTVDFYEINS-QESLTNILG--GFKGKGILKTR- 144 (354)
Q Consensus 78 ~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~-------gipt~~~~~v~s-~~el~~~~~--~~g~P~vlKp~- 144 (354)
++.++ .+.+.-++++++...||..|-+.+.++ .+.+|++..+.+ .+++.+.+. .+.||+|.||.
T Consensus 71 ---~y~~~hP~v~viDP~~ai~~L~dR~~m~~~v~~l~~~~~~~~v~~P~~v~i~~d~~~~~~~l~~agL~fPlI~KPlv 147 (307)
T pfam05770 71 ---EFREAHPEVPVLDPPPAIRRLHNRQSMLQVVADLNLSMEDGRFGVPPQVVVMKDASSLSRAGAKAGLTFPLIAKPLV 147 (307)
T ss_pred ---HHHHHCCCCEEECCHHHHHHHHCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCEEECCHH
T ss_conf ---99997899789779999999878999999999810656798383697799728677889999975986765623300
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCC-CCEECCCCCCCEEEE---ECCCCCCCC------CCE
Q ss_conf -467555664544674677898751355501011114564433-201014665413997---053345435------550
Q gi|254780158|r 145 -RLGYDGKGQKVYHENDCTQNLYASLGNVPLILERFTDFNCEI-SIIAARSLNGSICFY---DPIQNTHVN------GIL 213 (354)
Q Consensus 145 -~~GydGkG~~~i~~~~~l~~~~~~~~~~~~iiEe~I~~~~Ei-sviv~r~~~G~~~~~---p~~en~~~~------gil 213 (354)
.|+.+..-..++.+.+.+..+ ..||+++|||+++--+ -|-++ |+..++ |..-|...+ +.+
T Consensus 148 A~Gsa~SH~Malvf~~~gL~~L-----~pP~VlQefvNH~gvlfKvyVv----Gd~~~vv~R~Slpn~~~~~~~~~~~~~ 218 (307)
T pfam05770 148 ADGTAKSHEMSLVYDQEGLNKL-----QPPLVLQEFVNHGGVLFKVYVV----GEHVTVVKRRSLPDVSAGTLDRSSGSF 218 (307)
T ss_pred CCCCCCCCEEEEEECHHHHHCC-----CCCEEEEEEECCCCEEEEEEEE----CCEEEEEECCCCCCCCCCCCCCCCCCE
T ss_conf 2578565347899777576227-----9975889875478679999996----437899964677787733234656413
Q ss_pred -----------------EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC-CC-CEEEEEEECCCCC
Q ss_conf -----------------58985278787899999999886775402467753104553-88-4089994125704
Q gi|254780158|r 214 -----------------HKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVT-ND-GNVIANEMAPRVH 269 (354)
Q Consensus 214 -----------------~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~-~d-g~i~vnEiaPR~H 269 (354)
......+.+++ .....+++..+-++||. -+|+++..+. +. ++.||..|+-=|-
T Consensus 219 ~f~~vS~~~~~~~~~~~~~~~~~~~~p~--~~~~~~la~~LR~~lgL-~LFgfDvI~~~~t~~r~~VIDINyFPg 290 (307)
T pfam05770 219 RFSQVSNLTASADDAELDKILEIAEMPP--DPFLEDLARALRRALGL-RLFNFDIIRDAGTADRYLVIDINYFPG 290 (307)
T ss_pred ECCCCCCCCCCCCHHHCCCCCCCCCCCC--HHHHHHHHHHHHHHCCC-EEECEEEEEECCCCCEEEEEEECCCCC
T ss_conf 3100467778862232135652023999--89999999999998099-496648999889898589999067989
No 79
>TIGR01380 glut_syn glutathione synthase; InterPro: IPR006284 These are the glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions. ; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process.
Probab=98.21 E-value=3.4e-05 Score=54.83 Aligned_cols=228 Identities=16% Similarity=0.171 Sum_probs=136.8
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCCH--HHCCC----EEEECCCCC-----HHHHHHHH-------H-HCCEEEE-----
Q ss_conf 99999999887978999967677713--42268----279878999-----99999997-------4-1999998-----
Q gi|254780158|r 15 ARMLSMSAARLGFCTVILDPDSNCPA--NQVSN----QQIAARHDD-----IKALNTFA-------D-ICDYATY----- 70 (354)
Q Consensus 15 ~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad----~~~~~~~~D-----~~~l~~~~-------~-~~Dvit~----- 70 (354)
.--|.+|||++|+++..+.+++-+-- .-+|. ++...-..| ...=..|. . .+|+|--
T Consensus 20 t~alm~EaQ~RgH~~f~~~~~~Ls~~~G~~~A~~~~~~~~pv~~~~~~WQv~~~w~~~~~~~~~~L~d~~d~vlMRkDPP 99 (322)
T TIGR01380 20 TFALMEEAQKRGHELFFYEPGDLSVKNGRVFARAAPVKVLPVQLDDDRWQVKQDWYTLGEKVRLALKDELDVVLMRKDPP 99 (322)
T ss_pred HHHHHHHHHHCCCEEEEEECCCEEEECCHHHEEEEEEEEEEEEECCCCCEECHHHHHHHHHHHHCCCCCCCEEEECCCCC
T ss_conf 79999898546938999843611110231110021066860587188010112788876654201135742999847509
Q ss_pred -CCCCC-CHHHHHHHH-HCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf -77222-113334443-020034876778763152788888765058867432100068888641001312554023467
Q gi|254780158|r 71 -ESENI-PEKSISYLS-TLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLG 147 (354)
Q Consensus 71 -E~E~i-~~~~l~~l~-~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~G 147 (354)
..+-| .+-.|+.++ +++.|..+|++++-+=-|+..-.|- -=+||+..-.+..++.+|.++.+ -.||||- +|
T Consensus 100 f~~~Y~yaT~lLe~~~~~g~~viN~P~~lRd~NEKl~~~~Fp----~~~ppTLvt~~~~~ir~F~~e~~-divLKPL-~g 173 (322)
T TIGR01380 100 FDMEYIYATYLLELAEPTGTLVINSPQGLRDANEKLFALQFP----KVIPPTLVTRDKAEIRAFLAEHG-DIVLKPL-DG 173 (322)
T ss_pred CCHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCHHHHHHCCC----CCCCCCCEECCHHHHHHHHHHHH-CEEECCC-CC
T ss_conf 863154467788778427967984882322466034543341----23588501067799999998751-2587266-67
Q ss_pred CCCCCCCCCCCH-HHHHHHHH---HCCCCCEEHHHCCC----CCCCCCCEECCCCCCCEEEEEC-----C----CCCCCC
Q ss_conf 555664544674-67789875---13555010111145----6443320101466541399705-----3----345435
Q gi|254780158|r 148 YDGKGQKVYHEN-DCTQNLYA---SLGNVPLILERFTD----FNCEISIIAARSLNGSICFYDP-----I----QNTHVN 210 (354)
Q Consensus 148 ydGkG~~~i~~~-~~l~~~~~---~~~~~~~iiEe~I~----~~~Eisviv~r~~~G~~~~~p~-----~----en~~~~ 210 (354)
+.|.|+.++... -++..+.+ ..+..+++++.|+| .||-| +.+ +|+..=|.. . .|.-..
T Consensus 174 ~GG~gi~Rl~~~DpN~~~i~E~~~~~g~~~~~aQ~ylpei~~GDKRi--lL~---~G~Pig~a~~Rip~~gE~RgNlavG 248 (322)
T TIGR01380 174 MGGEGIFRLDPGDPNLNSILETLTQLGREPVMAQRYLPEIKEGDKRI--LLI---DGEPIGYAVARIPAGGEFRGNLAVG 248 (322)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHCCCEE--EEE---CCEECCCCEEECCCCCCCCHHHCCC
T ss_conf 77843676178998556898887652671687650205766179659--997---8835001014027887500020028
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEE
Q ss_conf 550589852787878999999998867754024677531045538840899941
Q gi|254780158|r 211 GILHKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEM 264 (354)
Q Consensus 211 gil~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEi 264 (354)
| .-.+..||+ +=++++..+.=.|.-.|++=|=.=|-++ |+-||
T Consensus 249 G----~~~a~~L~~----rD~eIc~~~~P~L~~rGl~fvGiDVIG~---~LTEv 291 (322)
T TIGR01380 249 G----RGEAQELSE----RDREICATVAPELKRRGLLFVGIDVIGG---YLTEV 291 (322)
T ss_pred C----EEEECCCCH----HHHHHHHHHCCCCCCCCEEEEEEEEECC---CCEEE
T ss_conf 8----622002667----8999998716100207747975467778---00798
No 80
>TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase homolog; InterPro: IPR011758 Members of this protein family contain a region of homology to the RimK family of alpha-L-glutamate ligases (IPR004666 from INTERPRO), various members of which modify the Glu-Glu C-terminus of ribosomal protein S6, or tetrahydromethanopterin, or a form of coenzyme F420 derivative. Members of this family are found so far in various Vibrio and Pseudomonas species and some other gamma and beta Proteobacteria. The function is unknown..
Probab=98.06 E-value=4.4e-05 Score=54.07 Aligned_cols=182 Identities=17% Similarity=0.225 Sum_probs=101.2
Q ss_pred HHHCCHHHHHHHHHCCCCCCC-CCCCCHHHHHHH---HHHCCCCEEEEECCCCCCCCCCCCCCCCH--------------
Q ss_conf 631527888887650588674-321000688886---41001312554023467555664544674--------------
Q gi|254780158|r 98 ISQDRLYEKKFFQESGLTTVD-FYEINSQESLTN---ILGGFKGKGILKTRRLGYDGKGQKVYHEN-------------- 159 (354)
Q Consensus 98 ~~~dK~~~K~~l~~~gipt~~-~~~v~s~~el~~---~~~~~g~P~vlKp~~~GydGkG~~~i~~~-------------- 159 (354)
+.-||+.+|..+..+||.+|. |-.+++..|+.. .++.+. -+|+||++| +.|+|..++.+.
T Consensus 34 lVDDKl~TK~~A~AaGi~VPelyGVI~~q~ev~~~~~ivkdh~-dFVIKPAqG-sGG~GIlVit~r~~~ryr~~sG~~i~ 111 (320)
T TIGR02291 34 LVDDKLKTKILAIAAGIAVPELYGVIEIQKEVKSLDDIVKDHE-DFVIKPAQG-SGGDGILVITDRLDERYRKSSGALIS 111 (320)
T ss_pred CCCCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHCCCC-CCEEECCCC-CCCCEEEEECCCCCCCEECCCCCCCC
T ss_conf 2031367889987336711013010023466543466627889-836726606-79872799703668840354101015
Q ss_pred -HHHHHHHHH-------CC--CCCEEHHHCCCCCCCC---C--------CEECC-------------CCCCCEEEEECCC
Q ss_conf -677898751-------35--5501011114564433---2--------01014-------------6654139970533
Q gi|254780158|r 160 -DCTQNLYAS-------LG--NVPLILERFTDFNCEI---S--------IIAAR-------------SLNGSICFYDPIQ 205 (354)
Q Consensus 160 -~~l~~~~~~-------~~--~~~~iiEe~I~~~~Ei---s--------viv~r-------------~~~G~~~~~p~~e 205 (354)
+|++.-... ++ ....+||-.|.||-=+ | ++|-| ..+|+ .
T Consensus 112 ~eeiE~hvSniL~GLySLGG~~D~AliEyrvkfDp~F~~~SYeGVPDiRiIVf~GyPVmaM~RlpTr~SdGK-------A 184 (320)
T TIGR02291 112 KEEIERHVSNILAGLYSLGGKRDRALIEYRVKFDPLFESVSYEGVPDIRIIVFKGYPVMAMLRLPTRASDGK-------A 184 (320)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCC-------C
T ss_conf 456778888888777650799773688532010534477111345872689641861021002765678883-------0
Q ss_pred CCCCCCC-----------EEEEEE-------C---CCCC----HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
Q ss_conf 4543555-----------058985-------2---7878----7899999999886775402467753104553884089
Q gi|254780158|r 206 NTHVNGI-----------LHKSIV-------P---ASIS----QKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVI 260 (354)
Q Consensus 206 n~~~~gi-----------l~~s~~-------P---a~i~----~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~ 260 (354)
|.|+.-+ ++-+|. | +.+| +.. ++.-++|...-+ |-+-|=++|++.+++|-.=+
T Consensus 185 NLHQGAvGvGiDlaTG~t~~a~w~n~pi~~HPDTg~~~sglq~PhW-~~ll~LAa~c~e-l~GLGY~GvD~VLDke~GPl 262 (320)
T TIGR02291 185 NLHQGAVGVGIDLATGKTLRAVWLNQPIEKHPDTGKDVSGLQVPHW-EKLLKLAAECYE-LVGLGYLGVDMVLDKEKGPL 262 (320)
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCH-HHHHHHHHHHHH-HCCCCCCCEEEEEECCCCCE
T ss_conf 2124602420231145032124206761458388875351016677-789999987754-30676002106874579881
Q ss_pred EEEECCCCCCCEEEEHH---HCCCCHHHHHHHHHHCC
Q ss_conf 99412570456046210---01358899999998188
Q gi|254780158|r 261 ANEMAPRVHNSGHWTEA---SCVISQFEQHIRSITNL 294 (354)
Q Consensus 261 vnEiaPR~Hnsgh~t~~---~~~~sqfe~h~rai~gl 294 (354)
|.|++-|| |.= |+ ....+.=-+|+-|=|+-
T Consensus 263 vLELNARP---GL~-IQIAN~~Gl~~Rl~~~~a~Le~ 295 (320)
T TIGR02291 263 VLELNARP---GLA-IQIANDAGLLPRLKEVEAKLEE 295 (320)
T ss_pred EEEECCCC---CCH-HHHHCCCCCCHHHHHHHHHCCC
T ss_conf 78644788---721-2231314533678999964055
No 81
>pfam00289 CPSase_L_chain Carbamoyl-phosphate synthase L chain, N-terminal domain. Carbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesize carbamoyl phosphate. See pfam00988. The small chain has a GATase domain in the carboxyl terminus. See pfam00117.
Probab=97.74 E-value=0.00012 Score=51.15 Aligned_cols=92 Identities=18% Similarity=0.167 Sum_probs=63.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--CCHHHCCCEEEEC-------CCCCHHHHHHHHHH--CCEEEE-
Q ss_conf 87899980989899999999887978999967677--7134226827987-------89999999999741--999998-
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN--CPANQVSNQQIAA-------RHDDIKALNTFADI--CDYATY- 70 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~--~pa~~~ad~~~~~-------~~~D~~~l~~~~~~--~Dvit~- 70 (354)
.|||+|.+.|..+.-.+.++++||++++++.++++ ++-...+|+.+.. +|.|.+.+.+.++. ||++-+
T Consensus 1 i~kvLIanrGeiA~ri~rt~re~gi~~v~i~s~~d~~s~~~~~ad~~~~~~~~~~~~~Yl~~~~Ii~ia~~~~~~aihpG 80 (109)
T pfam00289 1 IKKVLVANRGEIAVRIIRALRELGIETVAVNSNPDTVSTHVRLADEAYFLGPGPASESYLNIERILDIAEKEGADAIHPG 80 (109)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECC
T ss_conf 94899988879999999999986997999963344152256650576534799832111379999999998188968779
Q ss_pred ---CCCCCCHHHHHHHHH-CC-CCCCCHHHH
Q ss_conf ---772221133344430-20-034876778
Q gi|254780158|r 71 ---ESENIPEKSISYLST-LL-PTYPSSRAI 96 (354)
Q Consensus 71 ---E~E~i~~~~l~~l~~-~~-~v~P~~~al 96 (354)
-.|| .+..+.+++ ++ -+-|+++++
T Consensus 81 yGflsEn--~~fa~~~~~~Gi~fiGPs~~~i 109 (109)
T pfam00289 81 YGFLSEN--AEFAEACEKAGITFIGPSPEAI 109 (109)
T ss_pred CCCCCCC--HHHHHHHHHCCCEEECCCHHHC
T ss_conf 7623359--9999999988898999583549
No 82
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.63 E-value=0.00028 Score=48.64 Aligned_cols=63 Identities=25% Similarity=0.348 Sum_probs=47.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
.-|||||||-|.+|+.++.-++.+|.+|+++||....+.... +.. .-.+.|.++..++|+||.
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~-~~~-----~~~~~Ld~lL~~aDiv~l 203 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGV-DGV-----VGVDSLDELLAEADILTL 203 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC-CCC-----EECCCHHHHHHHCCEEEE
T ss_conf 698899989878999999999867986999889886000123-563-----110269999876999998
No 83
>pfam02826 2-Hacid_dh_C D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389.
Probab=97.57 E-value=0.00034 Score=48.14 Aligned_cols=62 Identities=24% Similarity=0.364 Sum_probs=47.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 9887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
+..|||||+|-|..|+.++.-++.+|.+|.++|+....... +.. ..+ ..+.++.+.||+|+.
T Consensus 34 L~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~--~~~---~~l~~ll~~sDii~~ 95 (176)
T pfam02826 34 LSGKTVGIIGLGRIGRAVARRLKAFGMKVIAYDRYPKAEAE---ALG--ARY---VSLDELLAESDVVSL 95 (176)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCHHH---HCC--EEE---CCHHHHHHHCCEEEE
T ss_conf 79999999896999999999999839812543798761023---157--166---689999862998875
No 84
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=97.54 E-value=0.00022 Score=49.44 Aligned_cols=59 Identities=22% Similarity=0.416 Sum_probs=44.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
..||+||+|.|..|+.++.-++.+|++|.++||..... . . ...+ ..+.++.+.||+||+
T Consensus 115 ~gktvGIIG~G~IG~~va~~l~afG~~vl~~DP~~~~~--~-~----~~~~---~sleell~~sDiIsl 173 (379)
T PRK00257 115 AERTYGIVGVGHVGGRLVRVLRGLGWKVLVCDPPRQEA--E-G----DGDF---VSLERILEECDIISL 173 (379)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHH--H-C----CCCE---ECHHHHHHHCCEEEE
T ss_conf 19879997716799999999997799899978457664--3-3----8603---349999874999999
No 85
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.52 E-value=0.00038 Score=47.77 Aligned_cols=136 Identities=18% Similarity=0.225 Sum_probs=81.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH--H--CCCEEEECCCCCHHHHHHH-HHHCCEEEECCCC-CCH
Q ss_conf 78999809898999999998879789999676777134--2--2682798789999999999-7419999987722-211
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPAN--Q--VSNQQIAARHDDIKALNTF-ADICDYATYESEN-IPE 77 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~--~--~ad~~~~~~~~D~~~l~~~-~~~~Dvit~E~E~-i~~ 77 (354)
+++.|+|+||.|+-+|....+.|+.|+++|.+++.-.. . .....+.++-.|.+.|.+. +..+|++..-..+ .-.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~N 80 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEVN 80 (225)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCEEEEEECCCHHH
T ss_conf 98999898578899999998789908999768899998632000449999268898999867986389999980886799
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHH-HHHHHCCCCEEEEECCCC
Q ss_conf 333444302003487677876315278888876505886743210006888-864100131255402346
Q gi|254780158|r 78 KSISYLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEINSQESL-TNILGGFKGKGILKTRRL 146 (354)
Q Consensus 78 ~~l~~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s~~el-~~~~~~~g~P~vlKp~~~ 146 (354)
..+..++.. .+.-+..+..++|...++.+ .+.|+- ..+....+. ......+.+|-++--...
T Consensus 81 ~i~~~la~~--~~gv~~viar~~~~~~~~~~-~~~g~~----~ii~Pe~~~~~~l~~~i~~p~~~~~~~~ 143 (225)
T COG0569 81 SVLALLALK--EFGVPRVIARARNPEHEKVL-EKLGAD----VIISPEKLAAKRLARLIVTPGALDVLEL 143 (225)
T ss_pred HHHHHHHHH--HCCCCEEEEEECCCHHHHHH-HHCCCC----EEECHHHHHHHHHHHHHCCCCHHEEEEC
T ss_conf 999999998--73998499995694167789-867994----8975589999999998538863103442
No 86
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.50 E-value=0.0035 Score=41.30 Aligned_cols=116 Identities=13% Similarity=0.089 Sum_probs=75.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEECCCCCHHHHHHHHHHCCEEEEC----------
Q ss_conf 8999809-89899999999887978999967677713--4226827987899999999997419999987----------
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAARHDDIKALNTFADICDYATYE---------- 71 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E---------- 71 (354)
||+|+|+ |.+|+.++.++.+.|++|.++..++.... .....+...+|+.|.+.+.+..+.+|++..-
T Consensus 2 ~ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v~gDl~dpesl~~Al~GvdaVi~~~~~~~~~~~~ 81 (319)
T CHL00194 2 SLLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELVYGDLSLPETIPPALEGITAIIDASTSRPSDLNN 81 (319)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCH
T ss_conf 79998998589999999999688908999578676323421596799942788778999965996799945667788620
Q ss_pred CCCCCHH----HHHHHH-HCCC--CCCCH------HHHHHHHCCHHHHHHHHHCCCCCCCCC
Q ss_conf 7222113----334443-0200--34876------778763152788888765058867432
Q gi|254780158|r 72 SENIPEK----SISYLS-TLLP--TYPSS------RAIEISQDRLYEKKFFQESGLTTVDFY 120 (354)
Q Consensus 72 ~E~i~~~----~l~~l~-~~~~--v~P~~------~al~~~~dK~~~K~~l~~~gipt~~~~ 120 (354)
++.++.+ .++..+ .+++ |+-|. ......+.|...-+++.+.|+|..=++
T Consensus 82 ~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga~~~~~~p~~~~K~~~E~~L~~Sgl~~TIlR 143 (319)
T CHL00194 82 AYQIDLEGKLALIEAAKAAKVKRFIFFSILNAEQYPQVPLMKIKSDIEEKLKQSGINYTIFR 143 (319)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 88988988999999999849988999613566668875677879999999986799859984
No 87
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.45 E-value=0.00045 Score=47.31 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=16.2
Q ss_pred CCEEEEECCCHHHHHHHHH-HHHCCCEEEEEECCC
Q ss_conf 8789998098989999999-988797899996767
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMS-AARLGFCTVILDPDS 36 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~a-A~~lG~~v~v~d~~~ 36 (354)
.||+||+|.|..|+.++.- |+.+|.+|+++||.+
T Consensus 146 ~ktvGIiG~G~IG~~vak~~a~~fgm~vi~yd~~~ 180 (332)
T PRK08605 146 DLKVAVIGTGRIGLAVAKIFAKGYGCDVVAYDPFP 180 (332)
T ss_pred CCEEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 77899997436889999999875698267877887
No 88
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.42 E-value=0.0007 Score=45.99 Aligned_cols=62 Identities=24% Similarity=0.377 Sum_probs=46.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHCCCEEEECCCCCHHHHHHHHHHCCEEEEC
Q ss_conf 88789998098989999999988797899996767771-34226827987899999999997419999987
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP-ANQVSNQQIAARHDDIKALNTFADICDYATYE 71 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p-a~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E 71 (354)
..||+||+|-|..|+.++.-|+.+|.+|+++||+-... +.++. ..+.| +.++.++||+||..
T Consensus 137 ~gktlGIiG~G~IG~~vA~~~~~fgm~Vi~yDP~~~~~~~~~~g-----v~~~~---l~ell~~sD~IslH 199 (524)
T PRK13581 137 YGKTLGVIGLGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLG-----VELVE---LDELLARADFITLH 199 (524)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCC-----CEEEE---HHHHHHHCCEEEEC
T ss_conf 69889997767578999999985497478877764466798719-----66860---89973108899993
No 89
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.41 E-value=0.00039 Score=47.74 Aligned_cols=59 Identities=27% Similarity=0.472 Sum_probs=44.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 87899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
-||+||+|-|..|++++..|+.+|.+|+.+|+.+..+. .... ..+.+.++.+.||+||.
T Consensus 151 GKtlGIIG~G~IG~~VA~~a~~fGm~Vi~yD~~~~~~~---~~~~------~~~sl~ell~~sD~Isl 209 (409)
T PRK11790 151 GKTLGIVGYGHIGTQLSVLAESLGMRVIFYDIEDKLPL---GNAT------QVGSLEELLAQSDVVSL 209 (409)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHCCC---CCCE------ECCCHHHHHHHCCEEEE
T ss_conf 87898636754769999999876998999786021256---6846------74889999875999998
No 90
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.37 E-value=0.0011 Score=44.82 Aligned_cols=33 Identities=12% Similarity=-0.171 Sum_probs=15.2
Q ss_pred EECCCCCCCEEEEHHH---CCCCHHHHHHHHHHCCCC
Q ss_conf 4125704560462100---135889999999818899
Q gi|254780158|r 263 EMAPRVHNSGHWTEAS---CVISQFEQHIRSITNLPL 296 (354)
Q Consensus 263 EiaPR~Hnsgh~t~~~---~~~sqfe~h~rai~glpl 296 (354)
.+-.-||-.| +|.++ ....-.++-++..-|-+.
T Consensus 282 nvi~TPHia~-~T~ea~~~~~~~~~~ni~~~l~G~~p 317 (333)
T PRK13243 282 NVVLAPHIGS-ATFEAREGMAELVAENLIAFKRGEVP 317 (333)
T ss_pred CEEECCCCCC-CHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999884441-54999999999999999999869999
No 91
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.37 E-value=0.00066 Score=46.19 Aligned_cols=60 Identities=18% Similarity=0.172 Sum_probs=37.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
..|||||+|-|..|+.++.-++.+|.+|+++|+.++... +.. .+ .+.+.++.+.||+|+.
T Consensus 145 ~gktvGIiG~G~IG~~va~~~~~fg~~Vi~yD~~~~~~~----~~~---~~--~~sleell~~sDiIsl 204 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDL----DFL---TY--KDSVKEAIKDADIISL 204 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCC----CCC---EE--CCCHHHHHHHCCEEEE
T ss_conf 586899967588999999998756998999899864221----213---23--2789999875999997
No 92
>PRK07574 formate dehydrogenase; Provisional
Probab=97.19 E-value=0.0016 Score=43.61 Aligned_cols=89 Identities=13% Similarity=0.204 Sum_probs=37.2
Q ss_pred EECC--CHHHHHHHHHHHHCCCEEEEEECCCCCCHH----HCCCEEEECC------CCCHHHHHHHHHHCCE-EEE--CC
Q ss_conf 9809--898999999998879789999676777134----2268279878------9999999999741999-998--77
Q gi|254780158|r 8 IIGG--GQLARMLSMSAARLGFCTVILDPDSNCPAN----QVSNQQIAAR------HDDIKALNTFADICDY-ATY--ES 72 (354)
Q Consensus 8 IlG~--GqL~rml~~aA~~lG~~v~v~d~~~~~pa~----~~ad~~~~~~------~~D~~~l~~~~~~~Dv-it~--E~ 72 (354)
+||+ |+||. -.-...-|++.++.+. .+.|-. ++.|--++++ |...+.+.+ +.+--+ +|. -.
T Consensus 50 llg~~~~elgl--r~~le~~gh~~v~t~d-k~g~~~~~~~~l~da~ivis~pf~p~ylT~E~Iek-ApnLKli~tAGVG~ 125 (385)
T PRK07574 50 LLGSVSGELGL--RTFLEERGHELVVTSD-KDGPDSVFERELPDADVVISQPFWPAYLTAERIAK-APNLKLAITAGIGS 125 (385)
T ss_pred EEEECCCHHHH--HHHHHHCCCEEEEECC-CCCCCCHHHHHCCCCEEEECCCCCCCCCCHHHHHC-CCCCEEEEEEEECC
T ss_conf 12223330105--8889855916999658-88985067751577639974588732114999943-88673999942047
Q ss_pred CCCCHHHHHHHHHCCCCC--CCHHHHHHHHCC
Q ss_conf 222113334443020034--876778763152
Q gi|254780158|r 73 ENIPEKSISYLSTLLPTY--PSSRAIEISQDR 102 (354)
Q Consensus 73 E~i~~~~l~~l~~~~~v~--P~~~al~~~~dK 102 (354)
.||+.++.. +.++.|. |+.++...+.+=
T Consensus 126 DnIDL~AA~--erGI~V~nvpG~Ns~SVAEht 155 (385)
T PRK07574 126 DHVDLQAAS--EHNITVAEVTGSNSISVAEHV 155 (385)
T ss_pred CHHHHHHHH--HCCCEEEECCCCCHHHHHHHH
T ss_conf 245499899--789999959998719999999
No 93
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.07 E-value=0.0035 Score=41.26 Aligned_cols=40 Identities=3% Similarity=-0.097 Sum_probs=21.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHH
Q ss_conf 6827987899999999997419999987722211333444
Q gi|254780158|r 44 SNQQIAARHDDIKALNTFADICDYATYESENIPEKSISYL 83 (354)
Q Consensus 44 ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l~~l 83 (354)
.+++..-+.++.+.+.+.++.+|+++.....++.+.++.+
T Consensus 25 ~~~~~~~~~t~~~el~~~~~dadi~i~~~~~i~~~~l~~a 64 (317)
T PRK06487 25 FDELQLHAATRPEQVAERLQGAQVAISNKVALDAAALAAA 64 (317)
T ss_pred CCCEEEECCCCHHHHHHHHCCCCEEEECCCCCCHHHHHCC
T ss_conf 9957995699989999984899199968971289999349
No 94
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.05 E-value=0.0022 Score=42.71 Aligned_cols=33 Identities=9% Similarity=-0.026 Sum_probs=14.1
Q ss_pred CCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHH
Q ss_conf 899999999997419999987722211333444
Q gi|254780158|r 51 RHDDIKALNTFADICDYATYESENIPEKSISYL 83 (354)
Q Consensus 51 ~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l~~l 83 (354)
+..+.+.+.+.++.+|++......++.+.++.+
T Consensus 29 ~~~~~ee~~~~i~dadili~~~~~i~~e~l~~a 61 (311)
T PRK08410 29 DTTSPEEVIERIKDANIIITNKVVIDKEVLSAL 61 (311)
T ss_pred CCCCHHHHHHHHCCCCEEEECCCCCCHHHHHCC
T ss_conf 898989999983899499974885499999369
No 95
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.03 E-value=0.0034 Score=41.39 Aligned_cols=132 Identities=11% Similarity=0.160 Sum_probs=90.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC--HHHCCCEEEECCCCCHHHHHHHH-HHCCEEEECCCCCCHHHHH
Q ss_conf 89998098989999999988797899996767771--34226827987899999999997-4199999877222113334
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP--ANQVSNQQIAARHDDIKALNTFA-DICDYATYESENIPEKSIS 81 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p--a~~~ad~~~~~~~~D~~~l~~~~-~~~Dvit~E~E~i~~~~l~ 81 (354)
.|-|.|-|..|+.++...++.|+.++++|.|++-. +.+.....+.||-.+.+-|+... +++.++...+.+ +..+.+
T Consensus 402 ~VII~G~GR~Gq~var~L~~~gi~~vviD~d~~~V~~~r~~G~~v~yGDat~~~vL~~AGi~~A~~vViai~d-~~~~~~ 480 (602)
T PRK03659 402 QVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNE-PEDTMK 480 (602)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEEEEECC-HHHHHH
T ss_conf 9899788756899999999789998999786799999997899089758999999986790405889998298-999999
Q ss_pred HHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHCCCCE
Q ss_conf 443020034876778763152788888765058867-432100068888641001312
Q gi|254780158|r 82 YLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTV-DFYEINSQESLTNILGGFKGK 138 (354)
Q Consensus 82 ~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~-~~~~v~s~~el~~~~~~~g~P 138 (354)
..+.-...+|....+..++||....++. ++|..-. |=..-.+++=..+++..+|+|
T Consensus 481 iv~~~r~~~P~l~I~aRar~~~~~~~L~-~~Ga~~vv~Et~essL~l~~~~L~~lG~~ 537 (602)
T PRK03659 481 LVELCQQHFPHLHILARARGRVEAHELL-QAGVTQFSRETFSSALELGRKTLVSLGMH 537 (602)
T ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHHHHCCCC
T ss_conf 9999998786996999869789999999-78999786627899999999999980999
No 96
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=97.02 E-value=0.0055 Score=39.99 Aligned_cols=65 Identities=15% Similarity=0.123 Sum_probs=54.2
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHH-HC---CCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 999809-898999999998879789999676777134-22---682798789999999999741999998
Q gi|254780158|r 6 IGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPAN-QV---SNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 6 IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~-~~---ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
|+|.|+ |.+|+.++.+..+.|++|.++..+++.+.. .+ .-+.+.+|++|.+.+.+..+.||++..
T Consensus 1 IlV~GatG~iG~~vv~~L~~~g~~Vr~l~R~~~~~~~~~l~~~gve~v~gD~~d~~sl~~al~gvd~v~~ 70 (232)
T pfam05368 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVEALKGVDVVFS 70 (232)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEE
T ss_conf 0998968289999999998589938999718736656666417988999068887899999679988999
No 97
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.95 E-value=0.0035 Score=41.28 Aligned_cols=132 Identities=12% Similarity=0.139 Sum_probs=90.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC--HHHCCCEEEECCCCCHHHHHHHH-HHCCEEEECCCCCCHHHHH
Q ss_conf 89998098989999999988797899996767771--34226827987899999999997-4199999877222113334
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP--ANQVSNQQIAARHDDIKALNTFA-DICDYATYESENIPEKSIS 81 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p--a~~~ad~~~~~~~~D~~~l~~~~-~~~Dvit~E~E~i~~~~l~ 81 (354)
.|-|.|.|..|+.++...++.|+.++++|.|++.. +.+.....+.||-.+.+-|.... ++..++...+.+ +..+.+
T Consensus 401 ~VII~G~GRvGq~var~L~~~gi~~vviD~d~~~V~~~r~~G~~v~yGDat~~~vL~~AGi~~Ar~vViaidd-~~~~~~ 479 (615)
T PRK03562 401 RVIIAGFGRFGQIVGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD-PQTNLQ 479 (615)
T ss_pred CEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEEEEECC-HHHHHH
T ss_conf 9899902804699999999789987999799999999996799089768999999986791406889999498-999999
Q ss_pred HHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHCCCCE
Q ss_conf 44302003487677876315278888876505886743210-0068888641001312
Q gi|254780158|r 82 YLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEI-NSQESLTNILGGFKGK 138 (354)
Q Consensus 82 ~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v-~s~~el~~~~~~~g~P 138 (354)
.++.-...+|....+..++||....++. ++|....--... .+++-..+++..+|+|
T Consensus 480 iv~~~r~~~P~l~IiaRard~~~~~~L~-~~Ga~~vv~Et~essL~l~~~~L~~lG~~ 536 (615)
T PRK03562 480 LTELVKEHFPHLQIIARARDVDHYIRLR-QAGVEKPERETFEGALKSGRLALESLGLG 536 (615)
T ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHH-HCCCCEEECCHHHHHHHHHHHHHHHCCCC
T ss_conf 9999997589986999839778899999-78999896665899999999999980999
No 98
>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Probab=96.93 E-value=0.003 Score=41.79 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=68.0
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC--HHHCCCEEEECCCCCHHHHHHH-HHHCCEEEECCCCCCHHHHHH
Q ss_conf 9998098989999999988797899996767771--3422682798789999999999-741999998772221133344
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP--ANQVSNQQIAARHDDIKALNTF-ADICDYATYESENIPEKSISY 82 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p--a~~~ad~~~~~~~~D~~~l~~~-~~~~Dvit~E~E~i~~~~l~~ 82 (354)
|.|+|.|++|+.++...++.| +++++|.+++-. +.......+.+|..|.+.|.+. .+++|.+..-.++- ...+..
T Consensus 1 viI~G~g~~G~~la~~L~~~~-~v~vId~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vi~~~~~d-~~n~~~ 78 (115)
T pfam02254 1 IIIIGYGRVGRSLAEELREGG-PVVVIDKDPERVEELREEGVPVVVGDATDEEVLEEAGIEDADAVVAATGDD-EANILI 78 (115)
T ss_pred CEEECCCHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCEEEEECCCH-HHHHHH
T ss_conf 999878889999999998089-999999987998778866986999956886678761920287999962984-999999
Q ss_pred HHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCC
Q ss_conf 43020034876778763152788888765058
Q gi|254780158|r 83 LSTLLPTYPSSRAIEISQDRLYEKKFFQESGL 114 (354)
Q Consensus 83 l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gi 114 (354)
+......+|....+..+.|+...+ .|.++|+
T Consensus 79 ~~~~r~~~~~~~iiar~~~~~~~~-~l~~~Ga 109 (115)
T pfam02254 79 VLLARELNPAKKIIARANDPEHAE-LLRRLGA 109 (115)
T ss_pred HHHHHHHCCCCEEEEEECCHHHHH-HHHHCCC
T ss_conf 999999789980999987899999-9997698
No 99
>pfam06849 DUF1246 Protein of unknown function (DUF1246). This family represents the N-terminus of a number of hypothetical archaeal proteins of unknown function.
Probab=96.93 E-value=0.01 Score=38.22 Aligned_cols=112 Identities=14% Similarity=0.165 Sum_probs=74.2
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC-CH--HHCCCEEEECC-CCCH--HHH-HHHHHHCCEEE-ECCCCCCH
Q ss_conf 999809898999999998879789999676777-13--42268279878-9999--999-99974199999-87722211
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNC-PA--NQVSNQQIAAR-HDDI--KAL-NTFADICDYAT-YESENIPE 77 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~-pa--~~~ad~~~~~~-~~D~--~~l-~~~~~~~Dvit-~E~E~i~~ 77 (354)
||.|||- .|...+.-|++-|+++++++..... +- ..++|+.++.+ |.|. +.. .++.+ -++|. +.--.+..
T Consensus 1 I~tl~SH-SALqIl~GAK~EGF~Tv~vc~~gr~~~Y~~f~~~De~iv~d~f~di~~~~~q~~L~~-~N~I~IPhgSfv~Y 78 (124)
T pfam06849 1 IATLGSH-SALQILDGAKDEGFRTVAVCQKGREKFYRRFPFVDEFIVVDKFKDILDEEVQQKLRE-NNAIFIPHGSFVAY 78 (124)
T ss_pred CCCCCCC-HHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH-CCEEEECCCCEEEE
T ss_conf 9312130-398997238873995789981797521332686737999565899872999999998-89799748884676
Q ss_pred HHHHHHHH--CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCC
Q ss_conf 33344430--2003487677876315278888876505886743
Q gi|254780158|r 78 KSISYLST--LLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDF 119 (354)
Q Consensus 78 ~~l~~l~~--~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~ 119 (354)
-..+.+++ .+|++-+-..++.-.||..++++|+++|||.|+-
T Consensus 79 ~G~~~ie~~~~VP~FGNR~lLrwEseR~~~~~lLe~Agi~~Pk~ 122 (124)
T pfam06849 79 VGYDRVENEFKVPIFGNRNLLRWESERDKERKLLEKAGIRYPKK 122 (124)
T ss_pred ECHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 55899860278870047888887653677999999769999835
No 100
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.92 E-value=0.0036 Score=41.19 Aligned_cols=39 Identities=26% Similarity=0.459 Sum_probs=34.0
Q ss_pred CCC--CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 988--789998098989999999988797899996767771
Q gi|254780158|r 1 MKK--KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 1 M~~--k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
|++ |+|+|||+|..|+-.+..+.+-|++|.++|++++.-
T Consensus 1 M~~~Ik~VaViGAG~MG~gIA~~~a~~G~~V~l~D~~~~~l 41 (310)
T PRK06130 1 MDNPIQNLAIIGAGAMGSGIAALFASKGLDVVLIDPMPGAL 41 (310)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 98998889897877999999999985899889997999999
No 101
>pfam02844 GARS_N Phosphoribosylglycinamide synthetase, N domain. Phosphoribosylglycinamide synthetase catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by Phosphoribosylglycinamide synthetase is the ATP- dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide. This domain is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (see pfam00289).
Probab=96.89 E-value=0.0038 Score=41.05 Aligned_cols=89 Identities=20% Similarity=0.293 Sum_probs=55.1
Q ss_pred EEEEECCCHHHHHHHHH--HHH--CCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH--CCEEEECCCCC-CH
Q ss_conf 89998098989999999--988--7978999967677713422682798789999999999741--99999877222-11
Q gi|254780158|r 5 TIGIIGGGQLARMLSMS--AAR--LGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI--CDYATYESENI-PE 77 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~a--A~~--lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~--~Dvit~E~E~i-~~ 77 (354)
||+|||+| ||+.+++ .++ ..-++.++ |. .|+..--...+..+.+|.+.+.+|++. +|.+..-.|.- ..
T Consensus 1 kILvIGsG--gREHAi~~~l~~s~~~~~l~~~-pg--N~gi~~~~~~~~i~~~d~~~i~~~~~~~~idlviiGPE~pL~~ 75 (99)
T pfam02844 1 KVLVVGSG--GREHALAWKLAQSPRVEKVYVA-PG--NPGTAQLAKNVNIDITDFEALADFAKEENIDLVVVGPEAPLVA 75 (99)
T ss_pred CEEEECCC--HHHHHHHHHHHCCCCCCEEEEE-CC--CCHHHHHCEEECCCCCCHHHHHHHHHHCCCCEEEECCCHHHHH
T ss_conf 98998788--7999999999649997769995-89--8157774750145844799999999981974999896067787
Q ss_pred HHHHHHH-HCCCCC-CCHHHHHH
Q ss_conf 3334443-020034-87677876
Q gi|254780158|r 78 KSISYLS-TLLPTY-PSSRAIEI 98 (354)
Q Consensus 78 ~~l~~l~-~~~~v~-P~~~al~~ 98 (354)
-..+.++ .+++++ |+.++.++
T Consensus 76 Gl~D~l~~~gi~vfGP~k~aA~L 98 (99)
T pfam02844 76 GIVDALRAAGIPVFGPSKAAARL 98 (99)
T ss_pred HHHHHHHHCCCEEECCCHHHHHC
T ss_conf 88999986899179928688736
No 102
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.83 E-value=0.0044 Score=40.65 Aligned_cols=59 Identities=15% Similarity=0.193 Sum_probs=43.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
..|||||+|-|..|+.++.-++.+|.+|+++++..... -.+.. + ..+.++.+.||+|+.
T Consensus 121 ~gktvGIiG~G~IG~~vA~~~~afg~~V~~~~r~~~~~---~~~~~----~---~~~~ell~~sDivsl 179 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVND---GISSI----Y---MEPEDIMKKSDFVLI 179 (303)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC---CCCEE----E---CCHHHHHHHCCEEEE
T ss_conf 18889998976569999999997798899989853224---57455----2---689999975999999
No 103
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.82 E-value=0.0073 Score=39.14 Aligned_cols=94 Identities=16% Similarity=0.252 Sum_probs=55.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHH-H
Q ss_conf 878999809-89899999999887978999967677713422682798789999999999741999998772221133-3
Q gi|254780158|r 3 KKTIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEKS-I 80 (354)
Q Consensus 3 ~k~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~-l 80 (354)
.++|.|||| |++|+-++.-...-||+|.++|.+. |. ...++...+|+|.+ .||... .
T Consensus 98 ~~~i~IIGG~G~mG~~F~~~f~~sGy~V~ild~~d---------------w~---~~~~~~~~advViV---sVPI~~T~ 156 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEKDD---------------WD---RADDILADAGMVIV---SVPIHLTE 156 (374)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCC---------------CC---CHHHHHHCCCEEEE---EECHHHHH
T ss_conf 87179980798277999999996798799616444---------------53---48988717998999---81458899
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCH-HHHHHHHHCCCCCC
Q ss_conf 44430200348767787631527-88888765058867
Q gi|254780158|r 81 SYLSTLLPTYPSSRAIEISQDRL-YEKKFFQESGLTTV 117 (354)
Q Consensus 81 ~~l~~~~~v~P~~~al~~~~dK~-~~K~~l~~~gipt~ 117 (354)
..+++.-++.++.-...++.-|. -.+..++.+.-|+.
T Consensus 157 ~VI~~l~~l~~~~lL~DiTSvK~~Pl~aMl~~h~gpV~ 194 (374)
T PRK11199 157 EVIEKLPPLPEDCILVDLTSVKNGPLQAMLAAHSGPVL 194 (374)
T ss_pred HHHHHCCCCCCCCEEEECHHCCHHHHHHHHHHCCCCCC
T ss_conf 99985778999868986100427899999985689850
No 104
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.82 E-value=0.01 Score=38.17 Aligned_cols=65 Identities=15% Similarity=0.201 Sum_probs=53.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC----EEEECCCCCHHHHHHHH-HHCCEEEE
Q ss_conf 89998098989999999988797899996767771342268----27987899999999997-41999998
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSN----QQIAARHDDIKALNTFA-DICDYATY 70 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad----~~~~~~~~D~~~l~~~~-~~~Dvit~ 70 (354)
+|.|+|+|+.|+.++....+-|++|+++|.+++.- .++++ ..+.++..|.+.|.+.. +++|.+..
T Consensus 2 ~IiI~GaG~vG~~La~~Ls~e~~dV~vID~d~~~~-~~~~~~lDv~~i~Gd~~~~~~L~~Agi~~ad~~IA 71 (455)
T PRK09496 2 KIIILGAGQVGGTLAERLVGENNDVTVIDTDEERL-RRLQDRLDVRTVVGNGSHPDVLREAGAEDADMLIA 71 (455)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH-HHHHHHCCEEEEEECCCCHHHHHHCCCCCCCEEEE
T ss_conf 79999988899999999986899799998999999-99886258689996689999999659986999999
No 105
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.79 E-value=0.011 Score=37.89 Aligned_cols=112 Identities=17% Similarity=0.097 Sum_probs=71.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCCCHHHCCC-----EEEECCCCCHHHHHHHHHHCCEEEE-CCCCCC
Q ss_conf 78999809898999999998879-7899996767771342268-----2798789999999999741999998-772221
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLG-FCTVILDPDSNCPANQVSN-----QQIAARHDDIKALNTFADICDYATY-ESENIP 76 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG-~~v~v~d~~~~~pa~~~ad-----~~~~~~~~D~~~l~~~~~~~Dvit~-E~E~i~ 76 (354)
++|.|||+|+.|+-.+.-+.+-| .+|.+.|.+.++.+.-... +....|-.|.+++.++++..|++.- -...+.
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 72899898666799999998578962999848888999987533466316994256758899987257789992870542
Q ss_pred HHHHHHH-HHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCC
Q ss_conf 1333444-30200348767787631527888887650588674
Q gi|254780158|r 77 EKSISYL-STLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVD 118 (354)
Q Consensus 77 ~~~l~~l-~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~ 118 (354)
..+++.+ +.++...-.+.--. +.+..+..+.++|+-.-+
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~~---~~~~~~~~a~~Agit~v~ 121 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYEE---PPWKLDEEAKKAGITAVL 121 (389)
T ss_pred HHHHHHHHHHCCCEEECCCCCC---HHHHHHHHHHHCCCEEEC
T ss_conf 9999999985998897546775---065654898874907971
No 106
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.79 E-value=0.0073 Score=39.15 Aligned_cols=60 Identities=27% Similarity=0.405 Sum_probs=43.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH-CCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 8789998098989999999988797899996767771342-2682798789999999999741999998
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQ-VSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~-~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
-||+||||-|..|+.++.-++-.|.++..+++.+. |... ..+ ..|.+ +.++++++|+|+.
T Consensus 146 gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~----~~y~~---l~ell~~sDii~l 206 (324)
T COG1052 146 GKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELG----ARYVD---LDELLAESDIISL 206 (324)
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCC-HHHHHHCC----CEECC---HHHHHHHCCEEEE
T ss_conf 88889978488999999987217968998668874-55574058----60416---8999976999999
No 107
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process.
Probab=96.71 E-value=0.0031 Score=41.68 Aligned_cols=62 Identities=24% Similarity=0.232 Sum_probs=49.9
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH--HCCEEE
Q ss_conf 8999809-8989999999988797899996767771342268279878999999999974--199999
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD--ICDYAT 69 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~--~~Dvit 69 (354)
||+|+|+ ||||+.|...+.+.|..+.+++.+.. .+.+.+....|..|.+.|.++.+ ++|+|+
T Consensus 1 rilitGa~GQlG~~L~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~Dl~dP~~l~~~~r~~~Pd~vv 65 (317)
T TIGR01214 1 RILITGANGQLGRELVQQLSKPGRVVVALTRSTR---LKLAARWSQLDLTDPEALEELLRAIRPDAVV 65 (317)
T ss_pred CEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCC---CCHHHHHHHHCCCCHHHHHHHHHHHCCCEEE
T ss_conf 9788738756799999970788827864368777---6113365440622468899999852875376
No 108
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.68 E-value=0.021 Score=36.00 Aligned_cols=65 Identities=11% Similarity=0.054 Sum_probs=52.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEECCCCCHHHHHHHHHHCCEEE
Q ss_conf 8999809-89899999999887978999967677713--42268279878999999999974199999
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAARHDDIKALNTFADICDYAT 69 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~~~~D~~~l~~~~~~~Dvit 69 (354)
||+|.|| |-+|+-++.++.+.|++|.+++.+..... ....-+++.+|..|.+.+.+..+.||+|.
T Consensus 2 riLVTGgtGfiG~~l~~~L~~~G~~V~~l~r~~~~~~~~~~~~~~~~~gDl~d~~~~~~~~~~~d~Vi 69 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLERGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKALAGCRALF 69 (328)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEE
T ss_conf 49998677799999999999784989999899986556521797799820799999999971785897
No 109
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.67 E-value=0.014 Score=37.23 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=13.7
Q ss_pred HHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCC
Q ss_conf 8867754024677531045538840899941257
Q gi|254780158|r 234 MRKVLETLDYVGILCIEFFVTNDGNVIANEMAPR 267 (354)
Q Consensus 234 a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR 267 (354)
+..+.+.+....+..+-.|. +|+.-+.|+.-.
T Consensus 355 a~~I~~~i~~~~v~~~~~l~--~~~~evie~~v~ 386 (455)
T PRK09496 355 ISAILRHVRRGDIVAVHSLR--RGAAEAIEAVAH 386 (455)
T ss_pred HHHHHHHHCCCCCEEEEEEC--CCCEEEEEEEEC
T ss_conf 99999984056844899955--995699999978
No 110
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.56 E-value=0.0037 Score=41.16 Aligned_cols=39 Identities=26% Similarity=0.479 Sum_probs=35.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 988789998098989999999988797899996767771
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
|+-|+|+|||+|..|+-.+....+-|++|.++|+++++-
T Consensus 1 m~i~~VaViGaG~mG~~IA~~~a~~G~~V~l~D~~~~~l 39 (282)
T PRK05808 1 MSIQKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDEAV 39 (282)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 972689998978899999999995799389997998999
No 111
>pfam03133 TTL Tubulin-tyrosine ligase family. Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed. This modification cycle involves a specific carboxypeptidase and the activity of the tubulin-tyrosine ligase (TTL). The true physiological function of TTL has so far not been established. Tubulin-tyrosine ligase (TTL) catalyses the ATP-dependent post-translational addition of a tyrosine to the carboxy terminal end of detyrosinated alpha-tubulin. In normally cycling cells, the tyrosinated form of tubulin predominates. However, in breast cancer cells, the detyrosinated form frequently predominates, with a correlation to tumour aggressiveness. On the other hand, 3-nitrotyrosine has been shown to be incorporated, by TTL, into the carboxy terminal end of detyrosinated alpha-tubulin. This reaction is not reversible by the carboxypep
Probab=96.54 E-value=0.042 Score=34.01 Aligned_cols=144 Identities=13% Similarity=0.227 Sum_probs=75.2
Q ss_pred HHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCC-----C--CCCC--CEECC-
Q ss_conf 06888864100-131255402346755566454467467789875135550101111456-----4--4332--01014-
Q gi|254780158|r 124 SQESLTNILGG-FKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASLGNVPLILERFTDF-----N--CEIS--IIAAR- 192 (354)
Q Consensus 124 s~~el~~~~~~-~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~~~~~~iiEe~I~~-----~--~Eis--viv~r- 192 (354)
..+++.+..++ -+--+|+||.. |+-|+|..++++.+++... ....++|+++||+. + ..+. |++..
T Consensus 53 d~~~f~~~~~~~~~~~wI~KP~~-~~~G~GI~l~~~~~~i~~~---~~~~~~VvQkYI~~PlLi~g~KFDlR~yvLvts~ 128 (291)
T pfam03133 53 DLGEFVDYFEDNERNTWIVKPSA-SARGRGIRITNDLSQILKQ---IQSRPLVVQKYIERPLLIDGRKFDIRLYVLVTSV 128 (291)
T ss_pred HHHHHHHHHHHCCCCEEEEEECC-CCCCCCEEEECCHHHHHHH---HCCCCEEEEECCCCCCEECCEEEEEEEEEEEECC
T ss_conf 99999999986899769991177-6898996983799997665---2379889752057751066745678999999526
Q ss_pred -------CCCCCEEEEE----C-CCCC-----CC-CCCE-----------------EEEE------ECCCCCHHHHHHHH
Q ss_conf -------6654139970----5-3345-----43-5550-----------------5898------52787878999999
Q gi|254780158|r 193 -------SLNGSICFYD----P-IQNT-----HV-NGIL-----------------HKSI------VPASISQKTSLLAH 231 (354)
Q Consensus 193 -------~~~G~~~~~p----~-~en~-----~~-~gil-----------------~~s~------~Pa~i~~~~~~~a~ 231 (354)
..+|-++++. + ..+. |- |.-+ .++. ....-.+.+..++.
T Consensus 129 ~Pl~iYly~eg~~R~~s~~Y~~~~~~~~n~~~HLTN~~ink~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 208 (291)
T pfam03133 129 NPLRVYVYREGLLRFASVKYSPSVSDLDDVEMHLTNYSIQKKSSSLNEDYNEPNGHKWSLFNFWKYLEEKDKEEIWLEIE 208 (291)
T ss_pred CCEEEEEECCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
T ss_conf 98699996470446107678975466422101210442376642014431125677321999999874679999999999
Q ss_pred HHHHHHHHHC--C-----------CCCCCCCEEEECCCCEEEEEEECCCCCCC
Q ss_conf 9988677540--2-----------46775310455388408999412570456
Q gi|254780158|r 232 SAMRKVLETL--D-----------YVGILCIEFFVTNDGNVIANEMAPRVHNS 271 (354)
Q Consensus 232 ~~a~~i~~~L--~-----------~~Gv~~VEffv~~dg~i~vnEiaPR~Hns 271 (354)
++..+.+.+. . +--+||++|+++.+.+.|+.||+-.|.=+
T Consensus 209 ~~i~~~~~a~~~~~~~~~~~~~~~~Fel~G~D~llD~~~kpwLLEVN~~Psl~ 261 (291)
T pfam03133 209 SIIIKTILAAEVEASRLNVQPLYNCFELYGFDFMIDENLKPWLLEVNASPSLH 261 (291)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 99999999998775230058899757799665998599978999997998988
No 112
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.46 E-value=0.005 Score=40.25 Aligned_cols=38 Identities=29% Similarity=0.520 Sum_probs=34.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 98878999809898999999998879789999676777
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+-|+|+|||+|..|+-.+..+..-|++|.++|++++.
T Consensus 1 M~Ik~VaViGaG~MG~gIA~~~a~~G~~V~l~D~~~~~ 38 (291)
T PRK06035 1 MDIKVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEI 38 (291)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 99588999887688999999999589988999899899
No 113
>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=96.46 E-value=0.078 Score=32.22 Aligned_cols=170 Identities=16% Similarity=0.129 Sum_probs=82.7
Q ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCCCHHHCCCEEE-----ECCCCCHHHHHHHHHH--------------
Q ss_conf 899980989899999999887-97899996767771342268279-----8789999999999741--------------
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARL-GFCTVILDPDSNCPANQVSNQQI-----AARHDDIKALNTFADI-------------- 64 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~l-G~~v~v~d~~~~~pa~~~ad~~~-----~~~~~D~~~l~~~~~~-------------- 64 (354)
|||+||+||.|++++--..+| |++++++..-.-.-+.+-.|+.. ..+.+|..+...-++.
T Consensus 19 RVGlIGAG~mG~~ivtQi~~m~Gm~vvaisd~~~~~ak~A~~~ag~~~~~~~e~~~~s~~a~Ai~aGKi~vT~D~~~i~~ 98 (438)
T COG4091 19 RVGLIGAGEMGTGIVTQIASMPGMEVVAISDRNLDAAKRAYDRAGGPKIEAVEADDASKMADAIEAGKIAVTDDAELIIA 98 (438)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHC
T ss_conf 99875454110679998750688369998424642788999873587200001111667889986286798265354323
Q ss_pred ---CCEEEECCCCCCH----HHHHHHHHCCCC-CCCHHHHHHHHCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHHHHC
Q ss_conf ---9999987722211----333444302003-487677876315278888876505886743--210006888864100
Q gi|254780158|r 65 ---CDYATYESENIPE----KSISYLSTLLPT-YPSSRAIEISQDRLYEKKFFQESGLTTVDF--YEINSQESLTNILGG 134 (354)
Q Consensus 65 ---~Dvit~E~E~i~~----~~l~~l~~~~~v-~P~~~al~~~~dK~~~K~~l~~~gipt~~~--~~v~s~~el~~~~~~ 134 (354)
.|+|+=-. .+|. ..+..+..+..+ .-+.++--. =--..|+..+++|+--.-. -.-.+--+|.+++..
T Consensus 99 ~~~IdvIIdAT-G~p~vGA~~~l~Ai~h~KHlVMmNVEaDvt--IGp~Lk~~Ad~~GviyS~~~GDeP~~~mEL~efa~a 175 (438)
T COG4091 99 NDLIDVIIDAT-GVPEVGAKIALEAILHGKHLVMMNVEADVT--IGPILKQQADAAGVIYSGGAGDEPSSCMELYEFASA 175 (438)
T ss_pred CCCCEEEEECC-CCCCHHHHHHHHHHHCCCEEEEEEEEECEE--ECHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 88604999767-885301475799985677289997540325--348899877654758854678971778789999986
Q ss_pred CCCEEEEECCCCCCCCCCC-CCC---CCHHHHHHHHHHCCCCCEEHHHCCCCCC
Q ss_conf 1312554023467555664-544---6746778987513555010111145644
Q gi|254780158|r 135 FKGKGILKTRRLGYDGKGQ-KVY---HENDCTQNLYASLGNVPLILERFTDFNC 184 (354)
Q Consensus 135 ~g~P~vlKp~~~GydGkG~-~~i---~~~~~l~~~~~~~~~~~~iiEe~I~~~~ 184 (354)
+||+++.- |||- .-+ .+++..+.-.+.-+-.+-++-+|.|..+
T Consensus 176 ~G~evv~a-------GKGkNnpl~~~a~Pdt~~eeA~r~~~n~~Ml~sF~DGsK 222 (438)
T COG4091 176 LGFEVVSA-------GKGKNNPLNIDANPDTYEEEAKRRNMNPRMLVSFQDGSK 222 (438)
T ss_pred CCCEEEEC-------CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCH
T ss_conf 49758861-------577689876678981478887604898678654314308
No 114
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.44 E-value=0.018 Score=36.49 Aligned_cols=66 Identities=21% Similarity=0.316 Sum_probs=51.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC--HHHC-CCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 8789998098989999999988797899996767771--3422-682798789999999999741999998
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP--ANQV-SNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p--a~~~-ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
-++|+|.|.|-||-|-++-|+.||.+|+++|.+++-- |.++ ||..+... |.+...+..+..|++.-
T Consensus 167 G~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 167 GKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKEIADAIID 235 (339)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEECC--CCHHHHHHHHHCCEEEE
T ss_conf 9899998774899999999998699699995787799999984882899767--81166776734739999
No 115
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.39 E-value=0.0056 Score=39.91 Aligned_cols=39 Identities=26% Similarity=0.387 Sum_probs=35.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 988789998098989999999988797899996767771
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
|+-|+|+|||+|..|+-.+..+..-|++|.++|+++++-
T Consensus 1 M~i~~VaViGaG~MG~gIA~~~a~~G~~V~l~D~~~~~l 39 (288)
T PRK08293 1 MTIKKVTVAGAGVLGSQIAFQTAFKGFDVTIYDISEEAL 39 (288)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 995789998978899999999995799289998988999
No 116
>PRK07660 consensus
Probab=96.37 E-value=0.0059 Score=39.77 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=35.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 988789998098989999999988797899996767771
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
|+-|+|+|||+|..|+-.+..+.+-|++|.++|++++..
T Consensus 1 M~Ik~VaViGaG~MG~gIA~~~a~~G~~V~l~D~~~~~l 39 (283)
T PRK07660 1 MGVQKIVVIGAGQMGSGIAQVCAMAGYDVKVQDLKQEQL 39 (283)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 997889998969899999999996698189997988999
No 117
>KOG0023 consensus
Probab=96.37 E-value=0.0073 Score=39.15 Aligned_cols=67 Identities=18% Similarity=0.280 Sum_probs=52.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC---CCCHHHCCCEEEECCCCCHHHHHHHHHHCCEE
Q ss_conf 88789998098989999999988797899996767---77134226827987899999999997419999
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS---NCPANQVSNQQIAARHDDIKALNTFADICDYA 68 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~---~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvi 68 (354)
+-|+|||.|.|-||-|-++-|+.||++|.++|... +.-..++..+.++....|.+...++.+.-|.+
T Consensus 181 pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~ 250 (360)
T KOG0023 181 PGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGG 250 (360)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 9868988557640168999998708679999278534899998549621588427878999998752675
No 118
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.33 E-value=0.012 Score=37.74 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=34.9
Q ss_pred EEEEEECCCCC-----CHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
Q ss_conf 89999676777-----13422682798789999999999741999998772221133344430
Q gi|254780158|r 28 CTVILDPDSNC-----PANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEKSISYLST 85 (354)
Q Consensus 28 ~v~v~d~~~~~-----pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l~~l~~ 85 (354)
+++++|..... +-.+...+...-+.+..+.+.+-++.+|++......++.+.++.+.+
T Consensus 3 kiv~ld~~~~~~~~~~~~~~~~~~~~~~~~t~~eel~e~i~dad~ii~~~~~i~~~vl~~ap~ 65 (314)
T PRK06932 3 KIVFLDSTAIPKHISIPRPSFEHEWTEYDHTSADQTIERAKDADIVITSKVIFSRETLQQLPK 65 (314)
T ss_pred EEEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHCCCC
T ss_conf 599985444788776311356850797899998999998579989997898639999953999
No 119
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.29 E-value=0.016 Score=36.86 Aligned_cols=108 Identities=10% Similarity=0.119 Sum_probs=56.8
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC--CHHHCCCEEEECCCCCHHHHHHHH-HHCCEEEECCCCCCHHHHHH
Q ss_conf 999809898999999998879789999676777--134226827987899999999997-41999998772221133344
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNC--PANQVSNQQIAARHDDIKALNTFA-DICDYATYESENIPEKSISY 82 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~--pa~~~ad~~~~~~~~D~~~l~~~~-~~~Dvit~E~E~i~~~~l~~ 82 (354)
+-|.|-|..||.++...++.|+.++++|.|++- -+.+.....+.+|..|.+.+.+.. +++.++.....+ +.+....
T Consensus 420 vii~G~Gr~G~~va~~L~~~~~~~vvid~d~~~v~~~~~~g~~v~~GDa~~~~~L~~agi~~A~~vvit~~d-~~~~~~i 498 (558)
T PRK10669 420 ALLVGYGRVGSLLGEKLLASGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPN-GYEAGEI 498 (558)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEEEEECC-HHHHHHH
T ss_conf 899898866999999999879988999898999999996899799978998899985791324999998198-8999999
Q ss_pred HHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCC
Q ss_conf 430200348767787631527888887650588
Q gi|254780158|r 83 LSTLLPTYPSSRAIEISQDRLYEKKFFQESGLT 115 (354)
Q Consensus 83 l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gip 115 (354)
++......|+...+..++|+.. .+.+.++|..
T Consensus 499 v~~~r~~~p~~~IiaRa~~~~~-~~~L~~aGA~ 530 (558)
T PRK10669 499 VASAREKNPDIEIIARAHYDDE-VAYITERGAN 530 (558)
T ss_pred HHHHHHHCCCCEEEEEECCHHH-HHHHHHCCCC
T ss_conf 9999987869869999798999-9999977999
No 120
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.29 E-value=0.087 Score=31.92 Aligned_cols=29 Identities=24% Similarity=0.456 Sum_probs=11.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 89998098989999999988797899996
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILD 33 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d 33 (354)
++.|+|+|-+|.+.++.|+.+|.+|+++|
T Consensus 169 ~V~V~G~G~iGl~a~~~ak~~Ga~Vi~vd 197 (349)
T TIGR03201 169 LVIVIGAGGVGGYMVQTAKAMGAAVVAID 197 (349)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 89998974899999999998599799994
No 121
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.23 E-value=0.02 Score=36.23 Aligned_cols=51 Identities=24% Similarity=0.150 Sum_probs=41.4
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH--HCCEEEE
Q ss_conf 999809-8989999999988797899996767771342268279878999999999974--1999998
Q gi|254780158|r 6 IGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD--ICDYATY 70 (354)
Q Consensus 6 IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~--~~Dvit~ 70 (354)
|+|+|+ ||||..|+..+. -+++++.++... .|..|.+.+.++.+ ++|+|+-
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------~Ditd~~~v~~~i~~~~PDvVIn 56 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-------------LDITDPDAVLEVIRETRPDVVIN 56 (281)
T ss_pred EEEECCCCHHHHHHHHHHC-CCCEEEECCCCC-------------CCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 8997698767999999717-784399515765-------------55568589999998619998998
No 122
>PRK07236 hypothetical protein; Provisional
Probab=96.20 E-value=0.0094 Score=38.43 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=33.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|+|+||.|+|+|--|..++.+.++.|++|.+++.++.
T Consensus 4 ~~~~kV~IVGaGiaGL~~A~~L~~~G~~v~v~Er~~~ 40 (386)
T PRK07236 4 MSKPRAVVVGGSLGGLFAANLLRRAGWDVDVFERSPT 40 (386)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 9999689999368999999999858999899868998
No 123
>KOG0068 consensus
Probab=96.17 E-value=0.029 Score=35.15 Aligned_cols=81 Identities=16% Similarity=0.331 Sum_probs=54.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE------CCCC-C
Q ss_conf 87899980989899999999887978999967677713422682798789999999999741999998------7722-2
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY------ESEN-I 75 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~------E~E~-i 75 (354)
-||+||||=|..|++++.-++.+|..++.+||..-.. .....-+ +.-.+.++..++|.||. +.|+ +
T Consensus 146 GKTLgvlG~GrIGseVA~r~k~~gm~vI~~dpi~~~~--~~~a~gv-----q~vsl~Eil~~ADFitlH~PLtP~T~~li 218 (406)
T KOG0068 146 GKTLGVLGLGRIGSEVAVRAKAMGMHVIGYDPITPMA--LAEAFGV-----QLVSLEEILPKADFITLHVPLTPSTEKLL 218 (406)
T ss_pred CCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHH--HHHHCCC-----EEEEHHHHHHHCCEEEECCCCCCCHHHCC
T ss_conf 6678885046211899999986585488606878467--7875165-----45409887755688998167882143113
Q ss_pred CHHHHHHHHHCCCCC
Q ss_conf 113334443020034
Q gi|254780158|r 76 PEKSISYLSTLLPTY 90 (354)
Q Consensus 76 ~~~~l~~l~~~~~v~ 90 (354)
+...+..+.+++.+.
T Consensus 219 n~~tfA~mKkGVriI 233 (406)
T KOG0068 219 NDETFAKMKKGVRII 233 (406)
T ss_pred CHHHHHHHHCCCEEE
T ss_conf 878999860785899
No 124
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.16 E-value=0.032 Score=34.83 Aligned_cols=55 Identities=22% Similarity=0.244 Sum_probs=40.9
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH--HCCEEE
Q ss_conf 8999809-8989999999988797899996767771342268279878999999999974--199999
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD--ICDYAT 69 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~--~~Dvit 69 (354)
+|+|+|+ ||||+.+..++.+.| ++..++.... ...+|+.|.+.+.++.. ++|+|+
T Consensus 2 kILvtGa~GqLG~~l~~~l~~~~-~~~~~~~~~~---------~~~~Dit~~~~v~~~~~~~~Pd~II 59 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------DYCGDFSNPEGVAETVRKIRPDVIV 59 (299)
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEECCCC---------CCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 79998999978999999866509-8899852630---------0136789999999999965999999
No 125
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.15 E-value=0.019 Score=36.40 Aligned_cols=62 Identities=19% Similarity=0.223 Sum_probs=39.8
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 8999809-89899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
+|+|||| ||+|+-++.-.+.-||+|.+.+.+... +..+|.+.=+..+ +...++++.+|+|..
T Consensus 2 kI~IIGG~G~MG~~Fa~~f~~sGyeV~I~gRd~~k-~~~va~~LGv~~~---~~~~e~~~~advVIv 64 (441)
T PRK08655 2 KISIIGGTGGLGKWFARFLKDKGYEVIVWGRDPKK-GKEVAKELGVEYA---SDNIDAAKDGDIVIV 64 (441)
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCH-HHHHHHHHCCCCC---CCHHHHHHCCCEEEE
T ss_conf 79999479817799999998679889998157313-5678887386222---447889724999999
No 126
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.14 E-value=0.01 Score=38.17 Aligned_cols=38 Identities=26% Similarity=0.475 Sum_probs=34.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 98878999809898999999998879789999676777
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+-|+|+|||+|..|+-.|..+..-|++|.++|.+++.
T Consensus 2 ~~ik~VaViGAG~MG~giA~~~a~~G~~V~l~D~~~e~ 39 (292)
T PRK07530 2 MAIKKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADR 39 (292)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 99888999896699999999999679968999798899
No 127
>pfam03446 NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase. The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold.
Probab=96.11 E-value=0.012 Score=37.59 Aligned_cols=62 Identities=13% Similarity=0.238 Sum_probs=44.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 7899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
++||+||-|..|..|+....+.|++|.++|.+++. +..+...-.. -.+.+.++++.||+|..
T Consensus 2 ~~Ig~IGlG~MG~~ma~~L~~~g~~v~v~d~~~~~-~~~~~~~g~~----~~~s~~e~~~~~dvIi~ 63 (163)
T pfam03446 2 AKIGFIGLGVMGSPMALNLLKAGYTVTVYNRTPEK-VEELVAEGAV----AAASPAEAAASADVVIT 63 (163)
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHCCCE----ECCCHHHHHHCCCEEEE
T ss_conf 88999836798999999999779969999797887-7999983995----53999999861999999
No 128
>pfam00389 2-Hacid_dh D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. This family represents the largest portion of the catalytic domain of 2-hydroxyacid dehydrogenases as the NAD binding domain is inserted within the structural domain.
Probab=96.10 E-value=0.019 Score=36.34 Aligned_cols=29 Identities=17% Similarity=0.062 Sum_probs=14.9
Q ss_pred CCCCCEEEEHHH---CCCCHHHHHHHHHHCCCC
Q ss_conf 704560462100---135889999999818899
Q gi|254780158|r 267 RVHNSGHWTEAS---CVISQFEQHIRSITNLPL 296 (354)
Q Consensus 267 R~Hnsgh~t~~~---~~~sqfe~h~rai~glpl 296 (354)
=||.+| +|.++ ....-+++-++.+-|-+.
T Consensus 277 TPHia~-~T~ea~~~~~~~~~~ni~~~l~g~~~ 308 (313)
T pfam00389 277 TPHIAG-ATEEAQENMAEEAAENLLAFLKGGTP 308 (313)
T ss_pred CCCHHH-HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 894656-48999999999999999999869999
No 129
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.10 E-value=0.016 Score=36.84 Aligned_cols=27 Identities=22% Similarity=0.326 Sum_probs=22.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC
Q ss_conf 988789998098989999999988797
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGF 27 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~ 27 (354)
|+|+||++||+|.+|..++....+-+.
T Consensus 2 ~~~~kI~fIG~GnMg~Aii~gll~~~~ 28 (245)
T PRK07634 2 LTKHRILFIGAGRMAEAIFSGLLKTSK 28 (245)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC
T ss_conf 999919998758999999999997799
No 130
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.09 Score=31.79 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=53.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHH---HCCCEEEECCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 8878999809-898999999998879789999676777134---2268279878999999999974199999877
Q gi|254780158|r 2 KKKTIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPAN---QVSNQQIAARHDDIKALNTFADICDYATYES 72 (354)
Q Consensus 2 ~~k~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~ 72 (354)
+.|||||=|+ |-||+.|....++-|++|+.++.+...+.. .-..+.+.-.-.+++.|....++.|+++.-+
T Consensus 16 kgKtIgITGAsGaLG~AL~k~f~~~GakVIalTh~~~~~~~~~~~~p~~wi~W~cG~E~~L~~~LkkiDILILNH 90 (250)
T PRK12367 16 NGKRIGITGASGALGKALTKLFRAKGAKVIGLTHSKINNSEISDESPNEWVSWECGKESSLDKTLAKIDVLILNH 90 (250)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCEEEECC
T ss_conf 898799967873899999999998899899983688887545567895289843499899999987588999838
No 131
>PRK10537 voltage-gated potassium channel; Provisional
Probab=95.97 E-value=0.043 Score=33.99 Aligned_cols=63 Identities=14% Similarity=0.056 Sum_probs=40.5
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHH-HHCCEE
Q ss_conf 999809898999999998879789999676777134226827987899999999997-419999
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFA-DICDYA 68 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~-~~~Dvi 68 (354)
+-|.|-|.+|+..+.+.++.|..++++++++......-....+.||.+|.+.|.+.. ++...+
T Consensus 207 ~IICGyG~~g~~v~~eL~~~g~~vVVI~~~~~~~~~~~~~~~I~GDaTdd~~L~kAgI~~Ak~V 270 (356)
T PRK10537 207 FIICGHSPLAINTYLGLRQRGQAVTVIVPLGEEHRLPDDADLIPGDSSDSAVLKKAGAARARAI 270 (356)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCEEECCCCCHHHHHHCCCHHHCEE
T ss_conf 8998988379999999997299979994580443020568879508997899987593450798
No 132
>KOG1057 consensus
Probab=95.95 E-value=0.13 Score=30.84 Aligned_cols=180 Identities=14% Similarity=0.164 Sum_probs=94.8
Q ss_pred CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCH---HHHHHHHHH----------CCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 8767787631527888887650588674321000---688886410----------013125540234675556645446
Q gi|254780158|r 91 PSSRAIEISQDRLYEKKFFQESGLTTVDFYEINS---QESLTNILG----------GFKGKGILKTRRLGYDGKGQKVYH 157 (354)
Q Consensus 91 P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v~s---~~el~~~~~----------~~g~P~vlKp~~~GydGkG~~~i~ 157 (354)
...+--.+.|||-.--+.|+..|||+|+|..++. .+++...++ .+.-|+|=||..+- | ..++++.
T Consensus 120 NdL~mQyll~DRR~Vy~iLe~~gI~~PRya~~nr~~pn~~~~~lie~eD~vEVnGevf~KPFVEKPVs~E-D-HNIYIYY 197 (1018)
T KOG1057 120 NDLDMQYLLQDRREVYSILEAEGIPLPRYAILNRDPPNPKLCNLIEGEDHVEVNGEVFQKPFVEKPVSAE-D-HNIYIYY 197 (1018)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCEEEECCEECCCCCCCCCCCCC-C-CCEEEEE
T ss_conf 2411889998899999999970877751676238998867765323787277766360477546887766-5-5079982
Q ss_pred CHH---HHHHHHHHC--------------CCCCEEHHHCCCCCCC-CCCEECC--CCCCCEEEEECC-CCCCCCCCEEEE
Q ss_conf 746---778987513--------------5550101111456443-3201014--665413997053-345435550589
Q gi|254780158|r 158 END---CTQNLYASL--------------GNVPLILERFTDFNCE-ISIIAAR--SLNGSICFYDPI-QNTHVNGILHKS 216 (354)
Q Consensus 158 ~~~---~l~~~~~~~--------------~~~~~iiEe~I~~~~E-isviv~r--~~~G~~~~~p~~-en~~~~gil~~s 216 (354)
... --+.++... ..+.+|-|+|++-+-+ +-|-+|. ..+-+.+--|.+ .-+.+|..-++.
T Consensus 198 PsSaGGGsqrLFRKIgnRSS~y~P~~~vRkeGSyIYEeFMptdgtDVKvYTVGp~YaHAEaRKSPvvDGkV~Rns~GKEv 277 (1018)
T KOG1057 198 PSSAGGGSQRLFRKIGNRSSEYHPDSSVRKEGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPVVDGKVERNSDGKEV 277 (1018)
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCEEEEECCCHHHHHHCCCCCCCCEEEECCCCCEE
T ss_conf 47788607899998656565448753444545311011057898620378607302336650386536435315887614
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECC--CCCCCEEEEHHH
Q ss_conf 85278787899999999886775402467753104553884089994125--704560462100
Q gi|254780158|r 217 IVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAP--RVHNSGHWTEAS 278 (354)
Q Consensus 217 ~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaP--R~Hnsgh~t~~~ 278 (354)
..|..++++.. .+|.+++-|+.- -|-+.++.- .+|.=||+.++- =|.||--+..++
T Consensus 278 RYpv~Ls~~EK----~iA~KVciAF~Q-~VCGFDLLR-a~G~SYVcDVNGfSFVKns~kYYDd~ 335 (1018)
T KOG1057 278 RYPVILNSSEK----QIARKVCIAFKQ-TVCGFDLLR-ANGKSYVCDVNGFSFVKNSNKYYDDC 335 (1018)
T ss_pred ECEEECCHHHH----HHHHHHHHHCCC-CCCCHHHHH-CCCCEEEEECCCEEEEECCHHHHHHH
T ss_conf 22253382667----777688864256-666567762-37816999416602440615666789
No 133
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=95.93 E-value=0.1 Score=31.42 Aligned_cols=138 Identities=16% Similarity=0.172 Sum_probs=80.7
Q ss_pred CCCCEEEEECCCHH-HHHHHHHHHHCC--CEE-EEEECCCCCCHHHCCCEEEE-CCCCCHHHHHHHHHHCCEEEECCCC-
Q ss_conf 98878999809898-999999998879--789-99967677713422682798-7899999999997419999987722-
Q gi|254780158|r 1 MKKKTIGIIGGGQL-ARMLSMSAARLG--FCT-VILDPDSNCPANQVSNQQIA-ARHDDIKALNTFADICDYATYESEN- 74 (354)
Q Consensus 1 M~~k~IgIlG~GqL-~rml~~aA~~lG--~~v-~v~d~~~~~pa~~~ad~~~~-~~~~D~~~l~~~~~~~Dvit~E~E~- 74 (354)
|.+.||||||.|-. ++.++.+.+.++ +++ .++|+++. -+..++.++-. ..|+|.+++.+ ...+|+|..-..+
T Consensus 1 ~~~irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~-~a~~~a~~~~~~~~~~~~~~ll~-~~~iD~V~Iatp~~ 78 (342)
T COG0673 1 MKMIRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPE-RAEAFAEEFGIAKAYTDLEELLA-DPDIDAVYIATPNA 78 (342)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCHH-HHHHHHHHCCCCCCCCCHHHHHC-CCCCCEEEEECCCH
T ss_conf 99327999898767888889999738874699999649989-99999998199745299999945-99998899969806
Q ss_pred --CCHHHHHHHHHCCCCC---CCHHHHHHHHCCHHHHHHHHHCCCCCCC---CCCCCHHHHHHHHHH--CCCCEEEEECC
Q ss_conf --2113334443020034---8767787631527888887650588674---321000688886410--01312554023
Q gi|254780158|r 75 --IPEKSISYLSTLLPTY---PSSRAIEISQDRLYEKKFFQESGLTTVD---FYEINSQESLTNILG--GFKGKGILKTR 144 (354)
Q Consensus 75 --i~~~~l~~l~~~~~v~---P~~~al~~~~dK~~~K~~l~~~gipt~~---~~~v~s~~el~~~~~--~~g~P~vlKp~ 144 (354)
.+ -++..|+.+..|+ |=+.+++-++ .+.+..++.|+...- ++.-.....+.+.++ .+|-+..++..
T Consensus 79 ~H~~-~a~~AL~aGkhVl~EKPla~t~~ea~---~l~~~a~~~g~~l~v~~~~Rf~p~~~~~k~li~~g~iG~i~~~~~~ 154 (342)
T COG0673 79 LHAE-LALAALEAGKHVLCEKPLALTLEEAE---ELVELARKAGVKLMVGFNRRFDPAVQALKELIDSGALGEVVSVQAS 154 (342)
T ss_pred HHHH-HHHHHHHCCCEEEEECCCCCCHHHHH---HHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 7799-99999977996999289989999999---9999999759949998846549899999999865987415999997
No 134
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=95.77 E-value=0.12 Score=30.93 Aligned_cols=66 Identities=14% Similarity=0.164 Sum_probs=46.7
Q ss_pred CEEEEECC-CHHHHHHHHHHH-HCCCEEEEEECCCCCCHHHCC---CEEEECCCC-CHHHHHHHHHHCCEEE
Q ss_conf 78999809-898999999998-879789999676777134226---827987899-9999999974199999
Q gi|254780158|r 4 KTIGIIGG-GQLARMLSMSAA-RLGFCTVILDPDSNCPANQVS---NQQIAARHD-DIKALNTFADICDYAT 69 (354)
Q Consensus 4 k~IgIlG~-GqL~rml~~aA~-~lG~~v~v~d~~~~~pa~~~a---d~~~~~~~~-D~~~l~~~~~~~Dvit 69 (354)
|||+|.|| |.+|.-|+.... .-|++|+++|...+....... -.++.+|.. |.+.+....++||+|.
T Consensus 2 KkILVTGgaGFIGs~Lv~~Ll~~~~~~V~~~d~~~~~~~~~~~~~~~~~~~gDi~~~~~~~~~~~~~~D~V~ 73 (347)
T PRK11908 2 KKVLILGVNGFIGHHLTKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVVL 73 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCEEE
T ss_conf 889997574389999999999828978999979976367755799859997754469999997660598897
No 135
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=95.74 E-value=0.05 Score=33.52 Aligned_cols=110 Identities=14% Similarity=0.125 Sum_probs=63.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHH-HHHHHHCCEEEECCCCCCHHHH
Q ss_conf 887899980989899999999887978999967677713422682798789999999-9997419999987722211333
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKAL-NTFADICDYATYESENIPEKSI 80 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l-~~~~~~~Dvit~E~E~i~~~~l 80 (354)
..++|+|+|.|..|+=++.+.++.|+.+.+++.+.+......+...-+++ .-.+.. ...+..+|+|.+ .+|..+.
T Consensus 2 ~~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d-~~~~~~~~~~~~~aDlViv---avPi~~~ 77 (279)
T COG0287 2 ASMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVID-ELTVAGLAEAAAEADLVIV---AVPIEAT 77 (279)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCH-HHCCCHHHHHCCCCCEEEE---ECCHHHH
T ss_conf 86489998774677999999997698479972477467787766358530-1001155541356998999---5778899
Q ss_pred H-HHHHCCC-CCCCHHHHHHHHCCHHHHHHHHHCCCC
Q ss_conf 4-4430200-348767787631527888887650588
Q gi|254780158|r 81 S-YLSTLLP-TYPSSRAIEISQDRLYEKKFFQESGLT 115 (354)
Q Consensus 81 ~-~l~~~~~-v~P~~~al~~~~dK~~~K~~l~~~gip 115 (354)
. .+++..+ +.|+.-......=|..-.+.+.+..-.
T Consensus 78 ~~~l~~l~~~l~~g~iv~Dv~S~K~~v~~a~~~~~~~ 114 (279)
T COG0287 78 EEVLKELAPHLKKGAIVTDVGSVKSSVVEAMEKYLPG 114 (279)
T ss_pred HHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCCC
T ss_conf 9999986303799988973642017899999974667
No 136
>pfam01370 Epimerase NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.
Probab=95.74 E-value=0.11 Score=31.22 Aligned_cols=64 Identities=17% Similarity=0.197 Sum_probs=49.2
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHH---HCCCEEEECCCCCHHHHHHHHHH--CCEEE
Q ss_conf 999809-898999999998879789999676777134---22682798789999999999741--99999
Q gi|254780158|r 6 IGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPAN---QVSNQQIAARHDDIKALNTFADI--CDYAT 69 (354)
Q Consensus 6 IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~ad~~~~~~~~D~~~l~~~~~~--~Dvit 69 (354)
|+|.|| |.+|+-|+....+.|++|.+++.++..... .....++.+|..|.+.+.++.+. +|+|.
T Consensus 1 ILItGasGfiG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~D~Vi 70 (235)
T pfam01370 1 ILVTGGTGFIGSALVRRLLQEGYEVIVLGRRRRSESLNTGRIRFRFHEGDLTDPDALERLLAEVQPDAVI 70 (235)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEE
T ss_conf 7997289799999999999787989999899730122211467659996588999999998538998999
No 137
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.65 E-value=0.033 Score=34.71 Aligned_cols=67 Identities=15% Similarity=0.219 Sum_probs=50.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 88789998098989999999988797-8999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
+.++|+++|.|..|+..+....+.|+ ++.+..++.+ -|..+|..+ -+...+.+.+.+....+|+|..
T Consensus 181 ~~~~vlviGaGem~~l~~k~L~~~g~~~i~v~nRt~~-ra~~la~~~-~~~~~~~~~l~~~l~~~Dvvis 248 (429)
T PRK00045 181 SGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLE-RAEELAEEF-GAEAIPLEELPEALAEADIVIS 248 (429)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHH-HHHHHHHHC-CCEEECHHHHHHHHHHCCEEEE
T ss_conf 2065999767489999999998559984999758677-899999975-9889749999999965899999
No 138
>pfam11379 DUF3182 Protein of unknown function (DUF3182). This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=95.64 E-value=0.046 Score=33.77 Aligned_cols=94 Identities=24% Similarity=0.300 Sum_probs=64.7
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC-----EEHHH
Q ss_conf 888765058867432100068888641001--31255402346755566454467467789875135550-----10111
Q gi|254780158|r 106 KKFFQESGLTTVDFYEINSQESLTNILGGF--KGKGILKTRRLGYDGKGQKVYHENDCTQNLYASLGNVP-----LILER 178 (354)
Q Consensus 106 K~~l~~~gipt~~~~~v~s~~el~~~~~~~--g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~~~~~-----~iiEe 178 (354)
..|.....=-+-|-+.+-|.+|...+...+ +.|+-+||.. +..|+||+++.+.++++.+++.+++.+ +++|+
T Consensus 104 ~~F~~~v~~~vLpG~tvFs~~DAr~Aa~~Ll~~G~VRlK~~~-a~gG~GQ~vv~d~~~Le~~L~a~~~~~l~~~GlVLE~ 182 (355)
T pfam11379 104 RAFAARVRDAVLPGYTVFSLEDARDAAARLLKGGPVRLKPPR-ACGGRGQQVVADADALDAALAALDDRELAAHGLVLEE 182 (355)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCC-CCCCCCCEEECCHHHHHHHHHCCCHHHHHHCCEEEEC
T ss_conf 999998762103873222678899999998537972550562-2378885574389999999872798889866868740
Q ss_pred CCCCCCCCCCEECCCCCCCEEEE
Q ss_conf 14564433201014665413997
Q gi|254780158|r 179 FTDFNCEISIIAARSLNGSICFY 201 (354)
Q Consensus 179 ~I~~~~Eisviv~r~~~G~~~~~ 201 (354)
=++--.-+||=-+| .+|-+..|
T Consensus 183 ~L~~~~TySVGqv~-v~g~~~SY 204 (355)
T pfam11379 183 DLDQPTTYSVGQVR-VAGLLASY 204 (355)
T ss_pred CCCCCCEEEEEEEE-ECCEEEEE
T ss_conf 25777225555599-98899888
No 139
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=95.53 E-value=0.031 Score=34.90 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=32.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 78999809898999999998879789999676777
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+|+|||+|..|.-.+.....-|++|.++|+++++
T Consensus 3 kkVAVIGAGvMGsGwAa~FA~aG~~V~L~Dp~peA 37 (489)
T PRK07531 3 MKAACIGGGVIGGGWAARFLLNGWDVAVFDPHPEA 37 (489)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf 67999871886899999999579969999488789
No 140
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.51 E-value=0.092 Score=31.76 Aligned_cols=62 Identities=13% Similarity=0.124 Sum_probs=44.9
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH
Q ss_conf 88789998098-989999999988797899996767771342268279878999999999974
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~ 63 (354)
+.|++.|-|++ -+|+.++....+.|++|+++|.+.+.-.....-..+..|..|.+.+.++.+
T Consensus 7 ~gK~alITG~s~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~ 69 (253)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFEQLNEQYPFATFVLDVADAAAVAQVCQ 69 (253)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 999899958856899999999998799999997887787489977999973799999999999
No 141
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=95.48 E-value=0.16 Score=30.15 Aligned_cols=65 Identities=15% Similarity=0.199 Sum_probs=49.1
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCH------HHCC---CEEEECCCCCHHHHHHHHH--HCCEEE
Q ss_conf 8999809-89899999999887978999967677713------4226---8279878999999999974--199999
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPA------NQVS---NQQIAARHDDIKALNTFAD--ICDYAT 69 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa------~~~a---d~~~~~~~~D~~~l~~~~~--~~Dvit 69 (354)
||+|-|| |.+|.-|+....+.|++|+++|.-....- .++. -.++.+|..|.+.+.++.. ++|+|.
T Consensus 2 kvLVTGg~GFIGs~l~~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~~~~~~~~~~~d~V~ 78 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEE
T ss_conf 19998987679999999999784989999889887376788888614788759983279989999999865999999
No 142
>PRK11579 putative oxidoreductase; Provisional
Probab=95.41 E-value=0.093 Score=31.71 Aligned_cols=136 Identities=13% Similarity=0.058 Sum_probs=69.7
Q ss_pred CCCC-EEEEECCCHHHHH-HHHHHHHC-CCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCC--
Q ss_conf 9887-8999809898999-99999887-97899996767771342268279878999999999974199999877222--
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARM-LSMSAARL-GFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENI-- 75 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rm-l~~aA~~l-G~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i-- 75 (354)
|+|| |+||||.|-.|+. .+.+..++ |++++.+.+.. +....++..-.--|.|.+.+.+ -..+|+|..-..+-
T Consensus 1 M~~~irvgiiG~G~~~~~~h~~~~~~~~~~~l~av~d~~--~~~~~a~~~~~~~~~~~~~ll~-~~~id~V~i~tp~~~H 77 (346)
T PRK11579 1 MSDKIRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSD--ETKVKADWPTVTVVSEPKHLFN-DPNIDLIVIPTPNDTH 77 (346)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCC--HHHHHCCCCCCCEECCHHHHHC-CCCCCEEEECCCCHHH
T ss_conf 998875999936299999999999629991999997989--9999502589953899999945-9999999997996789
Q ss_pred CHHHHHHHHHCCCCC---CCHHHHHHHHCCHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHH--CCCCEEEEE
Q ss_conf 113334443020034---87677876315278888876505886743---21000688886410--013125540
Q gi|254780158|r 76 PEKSISYLSTLLPTY---PSSRAIEISQDRLYEKKFFQESGLTTVDF---YEINSQESLTNILG--GFKGKGILK 142 (354)
Q Consensus 76 ~~~~l~~l~~~~~v~---P~~~al~~~~dK~~~K~~l~~~gipt~~~---~~v~s~~el~~~~~--~~g~P~vlK 142 (354)
..-++..++.+..|+ |=...+.-+ ..+-+..++.|+...-+ +.-.....+.+.++ .+|-+.-+.
T Consensus 78 ~~~~~~al~aGkhv~~EKP~a~~~~~a---~~l~~~a~~~g~~l~v~~~~R~~~~~~~~~~~i~~G~lG~i~~~~ 149 (346)
T PRK11579 78 FPLAKAALEAGKHVVVDKPFTVTLSQA---RELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFE 149 (346)
T ss_pred HHHHHHHHHCCCCEEECCCCCCCHHHH---HHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 999999998799489538767879999---999999987296799965531898999987787579978538999
No 143
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.40 E-value=0.058 Score=33.12 Aligned_cols=69 Identities=19% Similarity=0.195 Sum_probs=46.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
..|+++|+|.|..|+..+....+.|..-+.+..-...-|..+|+.+-.+.....+.+.+....+|+|..
T Consensus 180 ~~~~vlvvGaGem~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~~~~~~~~~l~~~l~~aDivis 248 (414)
T PRK13940 180 SSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIA 248 (414)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEE
T ss_conf 228389966864789999999976998799945756779999997088850169999999863887998
No 144
>PRK09117 consensus
Probab=95.36 E-value=0.026 Score=35.45 Aligned_cols=38 Identities=26% Similarity=0.455 Sum_probs=33.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 88789998098989999999988797899996767771
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
+-|+|+|||+|..|+-.+..+.+-|++|.++|+++++-
T Consensus 1 sI~~VaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l 38 (282)
T PRK09117 1 SIQTVGIIGAGTMGNGIAQACAVAGLDVVMVDISDAAV 38 (282)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 91779998977999999999996799689998988999
No 145
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.30 E-value=0.092 Score=31.73 Aligned_cols=69 Identities=16% Similarity=0.093 Sum_probs=50.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 78999809-8989999999988797899996767771342268279878999999999974199999877
Q gi|254780158|r 4 KTIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYES 72 (354)
Q Consensus 4 k~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~ 72 (354)
.+|+|||+ |+-|..+..+|.+.|++|.++..++.-....-.-.....|.-|.+.+.+.....|+|+--+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~ 70 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAF 70 (211)
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCEEEEEC
T ss_conf 9078995374567999999986798048998076766522353020002227456676635876699721
No 146
>pfam01262 AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain. This family now also contains the lysine 2-oxoglutarate reductases.
Probab=95.24 E-value=0.087 Score=31.92 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=46.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH--HCCCEEEECC-CCCHHHHHHHHHHCCEEEE
Q ss_conf 78999809898999999998879789999676777134--2268279878-9999999999741999998
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPAN--QVSNQQIAAR-HDDIKALNTFADICDYATY 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~--~~ad~~~~~~-~~D~~~l~~~~~~~Dvit~ 70 (354)
.++.|||+|--|..-+..|++||.+|.++|.+++.--. ..-..++..+ +.+.+.+.+.+..+|+++-
T Consensus 21 a~vvViG~Gv~G~~A~~~A~~lGa~V~v~D~~~~~l~~~~~~~~~~v~~~~~~~~~~l~~~i~~aDvvIg 90 (150)
T pfam01262 21 AKVVVIGGGVVGLGAAATAKGLGAPVTILDVRPERLEQLDSLFAEFVETDIFSNCEYLAEAIAEADLVIG 90 (150)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCEEEE
T ss_conf 7799989878999999999867998999729999999999864762001665379999999743879997
No 147
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.22 E-value=0.037 Score=34.42 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=31.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 88789998098989999999988797899996767771
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
+-|||+|||+|..|.-.+..+..-|++|.++|+++++-
T Consensus 6 ~Ik~VaVIGaG~MG~giAa~~a~~G~~V~l~D~~~~a~ 43 (321)
T PRK07066 6 DIKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAE 43 (321)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf 78879998887888999999994798599996988899
No 148
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=95.18 E-value=0.056 Score=33.19 Aligned_cols=37 Identities=19% Similarity=0.454 Sum_probs=32.5
Q ss_pred CCCCE---EEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 98878---99980989899999999887978999967677
Q gi|254780158|r 1 MKKKT---IGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~---IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|++++ |.|+|+|--|.+++.+..+.|++|.+++..+.
T Consensus 1 m~~~~~~DV~IvGaGp~Gl~lA~~L~~~G~~v~liE~~~~ 40 (392)
T PRK08773 1 MSRRSRRDAVIVGGGVVGAACALALADAGLSVALVEGREP 40 (392)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 9999999889999069999999999866997899917898
No 149
>PRK05993 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.11 Score=31.14 Aligned_cols=63 Identities=11% Similarity=0.096 Sum_probs=42.6
Q ss_pred CC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHH--CCCEEEECCCCCHHHHHHHHH
Q ss_conf 98-8789998098-989999999988797899996767771342--268279878999999999974
Q gi|254780158|r 1 MK-KKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQ--VSNQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~-~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~--~ad~~~~~~~~D~~~l~~~~~ 63 (354)
|+ +|+|.|-|++ -+|+.++++..+.|+.|+..+.+.+.-..- -.-..+..|..|.+.+.++++
T Consensus 1 M~m~K~vlITGassGIG~alA~~la~~G~~V~~~~R~~~~l~~l~~~~~~~~~~Dv~d~~~v~~~v~ 67 (277)
T PRK05993 1 MDMKRSILITGCSSGIGAYCAHALQKRGWRVFATCRKPEDIAALEAEGLEAFYLDYAEPESIAALVA 67 (277)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
T ss_conf 9998689992568699999999999879999999799999999984898199972667799999999
No 150
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=95.16 E-value=0.036 Score=34.48 Aligned_cols=68 Identities=18% Similarity=0.208 Sum_probs=45.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHHCCCEEE--ECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 88789998098989999999988797-899996767771342268279--8789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSNCPANQVSNQQI--AARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~~pa~~~ad~~~--~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
..|+++|||+|+.|+.++...++.|+ ++.++.++.+ -+..+++++- .....+.+.+.+....+|+|..
T Consensus 11 ~~~~vlVIGaG~~~~~~~~~L~~~g~~~i~v~nRt~~-ka~~la~~~~~~~~~~~~~~~l~~~l~~~DivI~ 81 (134)
T pfam01488 11 KGKKVLLIGAGEMARLAAKHLLSKGAKKITIANRTLE-KAKELAEEFGGEEVEALPLDELEELLAEADIVIS 81 (134)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHH-HHHHHHHHCCCCCEEEEECHHHHHHHHHCCEEEE
T ss_conf 4898999996099999999999759988999547578-9999999849972589851354413631999999
No 151
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.14 E-value=0.23 Score=29.06 Aligned_cols=66 Identities=18% Similarity=0.138 Sum_probs=53.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC---EEEECCCCCHHHHHHHHH--HCCEEE
Q ss_conf 78999809-8989999999988797899996767771342268---279878999999999974--199999
Q gi|254780158|r 4 KTIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSN---QQIAARHDDIKALNTFAD--ICDYAT 69 (354)
Q Consensus 4 k~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad---~~~~~~~~D~~~l~~~~~--~~Dvit 69 (354)
++|++.|| |=.|--.+.+..+-|++|+++|.-.+.-...+.. .++.+|..|.+.|.++.+ ++|+|.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaVi 72 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVV 72 (329)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEE
T ss_conf 929996586546899999999789848999568878888860204856883343199999999864998899
No 152
>PRK06847 hypothetical protein; Provisional
Probab=95.14 E-value=0.052 Score=33.42 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=33.0
Q ss_pred CC-CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 98-878999809898999999998879789999676777
Q gi|254780158|r 1 MK-KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~-~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+ -|+|.|+|+|--|..++.+.++.|++|.+++.+++.
T Consensus 1 m~~~kkV~IVGaG~aGL~lA~~L~~~Gi~v~V~E~~~~~ 39 (375)
T PRK06847 1 MGAVKKVLIVGGGIGGMSAAIALRKAGISVDLVEIDPEW 39 (375)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 989987999996689999999999679999999089998
No 153
>pfam02750 Synapsin_C Synapsin, ATP binding domain. Ca dependent ATP binding in this ATP grasp fold. Function unknown.
Probab=95.14 E-value=0.091 Score=31.78 Aligned_cols=140 Identities=14% Similarity=0.078 Sum_probs=84.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCEEHHHCCCCCCCCCCE
Q ss_conf 0588674321000688886410013125540234675556645446746778987513--55501011114564433201
Q gi|254780158|r 112 SGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHENDCTQNLYASL--GNVPLILERFTDFNCEISII 189 (354)
Q Consensus 112 ~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~~~~l~~~~~~~--~~~~~iiEe~I~~~~Eisvi 189 (354)
-.+|--+=...-+..+ .+..-.||+|+|--. +..|.|-.++.+..+++++.... ...-+-.|.||+..+.+.+.
T Consensus 29 e~FPLIeQtyypn~ke---m~~~~~fPvVvKvGh-ah~G~GKvkven~~~fqD~~s~va~~~~y~T~EPfid~kyDiriQ 104 (203)
T pfam02750 29 EKFPLIEQTYYPNHKE---MLTTPTFPVVVKIGH-AHSGMGKVKVDNHHDFQDIASVVALTKTYATTEPFIDSKYDIRVQ 104 (203)
T ss_pred CCCCCCEEECCCCHHH---HCCCCCCCEEEEECC-CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEE
T ss_conf 6677530002698777---425889888999754-156235899607778888875772136358861454542558852
Q ss_pred ECCCCCCCEEEEE---CCCCCCCCCCEEEEEECCCCCH--HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEE
Q ss_conf 0146654139970---5334543555058985278787--8999999998867754024677531045538840899941
Q gi|254780158|r 190 AARSLNGSICFYD---PIQNTHVNGILHKSIVPASISQ--KTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEM 264 (354)
Q Consensus 190 v~r~~~G~~~~~p---~~en~~~~gil~~s~~Pa~i~~--~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEi 264 (354)
-..+ +...|- +..|.-.| .-+.+-+ ++.++-+.++....+.+|+--+++||-...+||+=|+.|+
T Consensus 105 KIG~---~ykay~R~sISgnWK~N-------tGSamLEqi~mteryK~WvD~~S~lFGGLdIcav~ai~~KdGkeyIiEv 174 (203)
T pfam02750 105 KIGN---NYKAYMRTSISGNWKAN-------TGSAMLEQIAMSERYKLWVDTCSEMFGGLDICAVEALHGKDGRDYIIEV 174 (203)
T ss_pred EHHH---HHHHHEECCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEE
T ss_conf 0000---44766122003785447-------0378886502368999999999987389307999877768887568996
Q ss_pred C
Q ss_conf 2
Q gi|254780158|r 265 A 265 (354)
Q Consensus 265 a 265 (354)
+
T Consensus 175 n 175 (203)
T pfam02750 175 M 175 (203)
T ss_pred C
T ss_conf 2
No 154
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.07 E-value=0.062 Score=32.89 Aligned_cols=67 Identities=9% Similarity=0.118 Sum_probs=39.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC----EEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 988789998098989999999988797----8999967677713422682798789999999999741999998
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGF----CTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~----~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
|+.++||+||+|.+|..++....+-|. ++++.+++...-...+...+-+....|.. +.+..+|+|..
T Consensus 1 m~mm~I~fIG~GnMg~Aii~gl~~~~~~~~~~i~v~~r~~~~~~~~l~~~~~v~~~~~~~---~~~~~~diI~L 71 (279)
T PRK07679 1 MSIQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKK---ELLTDANILFL 71 (279)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCEEECCHH---HHHHHCCEEEE
T ss_conf 997889998768999999999997879997579997898499999999971966637779---99844999999
No 155
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.06 E-value=0.031 Score=34.90 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=31.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 78999809898999999998879789999676777
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+|+|||+|..|+-.+..+..-|++|.++|.+++.
T Consensus 3 kkV~ViGaG~MG~~IA~~~a~~G~~V~l~D~~~e~ 37 (289)
T PRK09260 3 EKIVVVGAGVMGRGIAYVFASSGFQTTLVDISQEQ 37 (289)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 76999796887899999999689988999799899
No 156
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.26 Score=28.65 Aligned_cols=64 Identities=14% Similarity=0.125 Sum_probs=44.4
Q ss_pred CC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 98-8789998098-9899999999887978999967677713422682798789999999999741
Q gi|254780158|r 1 MK-KKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~-~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~ 64 (354)
|+ +|++.|-|++ -+|+.++....+.|++|+..+.+...-...-.-..+..|..|.+.+.++.+.
T Consensus 1 M~~~KvalITGassGIG~a~A~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 66 (270)
T PRK06179 1 MSNKKVALVTGASSGIGRATAEALARAGYRVFGTSRNPARATPIPGVELLELDVTDDASVQAAVQE 66 (270)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCEEEEEECCCHHHHHHHHHH
T ss_conf 989958999072469999999999987999999968977730548978999107999999999999
No 157
>pfam02737 3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. This family also includes lambda crystallin.
Probab=95.01 E-value=0.036 Score=34.47 Aligned_cols=34 Identities=24% Similarity=0.462 Sum_probs=30.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8999809898999999998879789999676777
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
||+|||+|..|+-.+..+..-|++|.++|++++.
T Consensus 1 kV~ViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~ 34 (180)
T pfam02737 1 KVAVIGAGTMGAGIAQVFARAGLEVVLVDISEEA 34 (180)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf 9899997889999999999679939999799899
No 158
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.18 Score=29.85 Aligned_cols=63 Identities=13% Similarity=0.122 Sum_probs=46.2
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-9899999999887978999967677713422682798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~ 64 (354)
++.|+++|-||+ -+|+.++.+..+.|.+|++++.+...... ..-.++.+|..|.+.+.++.+.
T Consensus 6 l~~K~alITGgs~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 69 (254)
T PRK07856 6 LTGRVVLVTGGTRGVGAGISEAFLAAGATVVVCGRRAPEVDG-RPAEFHACDIRDPDQVAALVDA 69 (254)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCC-CCEEEEECCCCCHHHHHHHHHH
T ss_conf 599989994767689999999999879999999798557489-8439998469999999999999
No 159
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.95 E-value=0.043 Score=33.97 Aligned_cols=37 Identities=27% Similarity=0.433 Sum_probs=33.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 8789998098989999999988797899996767771
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
-++|+|||+|..|+-.+..+.+-|++|.++|++++.-
T Consensus 2 i~~VaViGaG~mG~giA~~~a~~G~~V~l~D~~~~~l 38 (308)
T PRK06129 2 MGSIAIVGAGLIGRAWAIVFARAGHRVRLWDADPAAL 38 (308)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 9879997778999999999985899389998988999
No 160
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.91 E-value=0.042 Score=34.04 Aligned_cols=36 Identities=19% Similarity=0.493 Sum_probs=32.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 878999809898999999998879789999676777
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
-|+|+|||+|..|+-.+..+..-|++|.++|++++.
T Consensus 2 I~kV~ViGaG~mG~~IA~~~a~~G~~V~l~D~~~~~ 37 (284)
T PRK07819 2 IQRVGVVGAGQMGSGIAEVCARAGVDVLVFETTEEA 37 (284)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf 167999897789999999999579908999798899
No 161
>pfam06973 DUF1297 Domain of unknown function (DUF1297). This family represents the C-terminus (approximately 200 residues) of a number of archaeal proteins of unknown function. One member is annotated as being a possible carboligase enzyme.
Probab=94.91 E-value=0.073 Score=32.43 Aligned_cols=66 Identities=18% Similarity=0.265 Sum_probs=52.6
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHC------CCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCH
Q ss_conf 527878789999999988677540------246775310455388408999412570456046210013588
Q gi|254780158|r 218 VPASISQKTSLLAHSAMRKVLETL------DYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQ 283 (354)
Q Consensus 218 ~Pa~i~~~~~~~a~~~a~~i~~~L------~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sq 283 (354)
.|+.+-+.+..++.+++.+.+++- |.+|-|+.|..+|+|.++++=|+++|.--.-...+.+...|.
T Consensus 86 ~p~vlRESLL~~vfe~ge~fV~ask~l~~PG~iGPFcLq~ivt~dle~vvFevS~RI~ggtN~~~~gsPYs~ 157 (188)
T pfam06973 86 IPAVLRESLLEKVFEMGEKFVEASKELVPPGIIGPFCLQSIVTDDLEFVVFEVSARIVGGTNVYMNGSPYSK 157 (188)
T ss_pred CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 431440765799999999999999985699861344466788798619999985300488877458999726
No 162
>pfam04321 RmlD_sub_bind RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.
Probab=94.89 E-value=0.18 Score=29.74 Aligned_cols=51 Identities=29% Similarity=0.292 Sum_probs=41.9
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH--CCEEE
Q ss_conf 999809-89899999999887978999967677713422682798789999999999741--99999
Q gi|254780158|r 6 IGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI--CDYAT 69 (354)
Q Consensus 6 IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~--~Dvit 69 (354)
|+|.|| |.+|+-|+....+.|++|++++... .|+.|.+.+..+.+. +|+|.
T Consensus 1 ILVtG~~GfiGs~l~~~L~~~g~~v~~~~r~~-------------~D~~d~~~l~~~~~~~~pd~Vi 54 (284)
T pfam04321 1 ILVTGANGQLGRELTRLLAERGVEVVALDRPE-------------LDLTDPEAVAALVREARPDVVV 54 (284)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEECCCC-------------CCCCCHHHHHHHHHHCCCCEEE
T ss_conf 69964899899999999986899899954862-------------5788999999999864997999
No 163
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.25 Score=28.86 Aligned_cols=60 Identities=18% Similarity=0.247 Sum_probs=43.1
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771342268279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~ 63 (354)
|+.|++.|-|++ -+|+.+++...+.|++|+.++.+.. ..+..+.+..|..|.+.+.++.+
T Consensus 1 L~~K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~---~~~~~~~~~~D~~d~~~~~~~~~ 61 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI---DDFPGELFACDLADIEQTAATLA 61 (234)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC---CCCCCEEEEEECCCHHHHHHHHH
T ss_conf 94198999377888999999999987999999634754---47897699995799999999999
No 164
>PRK06123 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.27 Score=28.62 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=30.4
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 988789998098-98999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|.+|.+.|=|++ -+|+.++....+.|+.|++.+..
T Consensus 1 m~nKvalITGas~GIG~aia~~la~~Ga~V~i~~~~ 36 (249)
T PRK06123 1 MMRKVMIITGASRGIGAATALLAAERGYAVCLNYLR 36 (249)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 999889996868799999999999879989998089
No 165
>PRK09739 hypothetical protein; Provisional
Probab=94.83 E-value=0.21 Score=29.37 Aligned_cols=73 Identities=15% Similarity=0.064 Sum_probs=49.4
Q ss_pred CCCCEEEEECC--------CHHHHHHHHHHHHCCCEEEEEECCCCC--CHHHCCCEEEE----CCC-CCHHHHHHHHHHC
Q ss_conf 98878999809--------898999999998879789999676777--13422682798----789-9999999997419
Q gi|254780158|r 1 MKKKTIGIIGG--------GQLARMLSMSAARLGFCTVILDPDSNC--PANQVSNQQIA----ARH-DDIKALNTFADIC 65 (354)
Q Consensus 1 M~~k~IgIlG~--------GqL~rml~~aA~~lG~~v~v~d~~~~~--pa~~~ad~~~~----~~~-~D~~~l~~~~~~~ 65 (354)
|++|+|+||=+ +.|+...+.++++.|.+|.+.|=+... |.....|..-. ..+ .|..+..+..+.+
T Consensus 1 M~~kkiLIV~aHP~~~S~~~ala~~~~~~l~~~GheV~v~DLy~~~FdP~l~~~d~~~~~~~~~~~~~dv~~eq~~L~~A 80 (201)
T PRK09739 1 MQSERIYLVWAHPRHDSLTAKVADAIHQRAQERGIQVTELDLYRRGFDPVLTPEDEPDWKNMDKRYSPEVHQLYSELLEH 80 (201)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99777999973899865689999999999998799599997130269966583312132234567878899999999867
Q ss_pred CEEEECCC
Q ss_conf 99998772
Q gi|254780158|r 66 DYATYESE 73 (354)
Q Consensus 66 Dvit~E~E 73 (354)
|.|++-|.
T Consensus 81 D~lVfvfP 88 (201)
T PRK09739 81 DALVVVFP 88 (201)
T ss_pred CEEEEECC
T ss_conf 97999874
No 166
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.80 E-value=0.056 Score=33.22 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=34.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 98878999809898999999998879789999676777
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+.|||+|+|.|-+|.-++.+....|++|+.+|.+++-
T Consensus 1 m~~kkI~ViGlGYVGL~~a~~lA~~G~~Vig~D~d~~k 38 (415)
T PRK11064 1 MSFETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHA 38 (415)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 99887999886877899999999688948999899999
No 167
>PRK07208 hypothetical protein; Provisional
Probab=94.79 E-value=0.073 Score=32.44 Aligned_cols=39 Identities=26% Similarity=0.425 Sum_probs=33.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 988789998098989999999988797899996767771
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
|.||+|.|||+|--|.-.|..+.+.|++|.+++.++..-
T Consensus 1 ~~~kkv~IiGAG~~GL~aA~~L~~~g~~v~vlEk~~~vG 39 (474)
T PRK07208 1 TEKKSVVIIGAGPAGLTAAYELVKRGYPVTILEADPEVG 39 (474)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 998759998976899999999986899759997899875
No 168
>pfam01210 NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus. NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain.
Probab=94.74 E-value=0.11 Score=31.35 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=30.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 7899980989899999999887978999967677
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|||+|||+|--|.-|+..+.+-|.+|.+++.+++
T Consensus 1 kKI~IiGaG~wGtAla~~la~n~~~V~l~~r~~~ 34 (159)
T pfam01210 1 KKIAVLGAGSWGTALAKVLARNGHEVRLWGRDEE 34 (159)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCH
T ss_conf 9899999699999999999987998999990436
No 169
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=94.65 E-value=0.081 Score=32.11 Aligned_cols=40 Identities=40% Similarity=0.562 Sum_probs=33.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCH
Q ss_conf 988789998098989999999988797--8999967677713
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPA 40 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa 40 (354)
|++|+|.|||+|+=|...+.+.++.|+ ++.+++..+..|-
T Consensus 1 M~~~~iVIIG~G~AG~~aA~~lR~~g~~g~Itli~~E~~~PY 42 (400)
T PRK09754 1 MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPY 42 (400)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 996729999775999999999980694997999989999988
No 170
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.65 E-value=0.39 Score=27.48 Aligned_cols=71 Identities=20% Similarity=0.251 Sum_probs=53.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC-----EEEECCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 8878999809-8989999999988797899996767771342268-----279878999999999974199999877
Q gi|254780158|r 2 KKKTIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSN-----QQIAARHDDIKALNTFADICDYATYES 72 (354)
Q Consensus 2 ~~k~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad-----~~~~~~~~D~~~l~~~~~~~Dvit~E~ 72 (354)
+-|||+|-|+ |-||+.++.+.++-|.+|+++..+++.....+.. +.+.=+-.+++++.+..++.|++..-.
T Consensus 179 KGKTV~VTGASG~LG~aL~k~l~~~GAKVIalTs~~~~i~~~~~~~~~~~~~i~W~~G~E~~L~~~L~kiDILILNH 255 (410)
T PRK07424 179 KGKTVAVTGASGTLGQALLKELHQQGAKVIALTSNSDKIPLEINGEDLPVKTIHWQVGQEAALAELLEKVDILVINH 255 (410)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCEEEECC
T ss_conf 68679995477377899999999779989999358986553446654671278643288889888886468998848
No 171
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=94.60 E-value=0.078 Score=32.21 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=31.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|++ |.|||+|-.|...|...++.|++|.|+|.+.
T Consensus 1 m~~--V~VIGaGivGlstA~~La~~G~~VtviDr~~ 34 (410)
T PRK12409 1 MSH--IAVIGAGITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred CCC--EEEECCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 995--9998983999999999997899189996989
No 172
>KOG3895 consensus
Probab=94.59 E-value=0.16 Score=30.09 Aligned_cols=165 Identities=14% Similarity=0.080 Sum_probs=91.7
Q ss_pred CCCCCCCHHHHHHHHCCHH----HHHHHHHCC---CCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 2003487677876315278----888876505---886743210006888864100131255402346755566454467
Q gi|254780158|r 86 LLPTYPSSRAIEISQDRLY----EKKFFQESG---LTTVDFYEINSQESLTNILGGFKGKGILKTRRLGYDGKGQKVYHE 158 (354)
Q Consensus 86 ~~~v~P~~~al~~~~dK~~----~K~~l~~~g---ipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~GydGkG~~~i~~ 158 (354)
+++...|..++-..-||-- +++...++| +|.-+-...-+..+ .+..-.||+|+|-.. +.+|.|-.++++
T Consensus 185 giP~vNSl~SvynFcdkpwvf~Qlvki~~slG~e~fPli~qt~yPnHK~---m~s~~tyPvVVkvgh-ahsGmGKiKV~N 260 (488)
T KOG3895 185 GIPSVNSLTSVYNFCDKPWVFAQLVKITKSLGPEKFPLIEQTFYPNHKE---MLSQPTYPVVVKVGH-AHSGMGKIKVEN 260 (488)
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHH---HCCCCCCCEEEEECC-CCCCCCEEEECC
T ss_conf 7864202678988614568999999998751854455440010687442---214887767998254-335653255234
Q ss_pred HHHHHHHHHH--CCCCCEEHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHH------HHHH
Q ss_conf 4677898751--3555010111145644332010146654139970533454355505898527878789------9999
Q gi|254780158|r 159 NDCTQNLYAS--LGNVPLILERFTDFNCEISIIAARSLNGSICFYDPIQNTHVNGILHKSIVPASISQKT------SLLA 230 (354)
Q Consensus 159 ~~~l~~~~~~--~~~~~~iiEe~I~~~~Eisviv~r~~~G~~~~~p~~en~~~~gil~~s~~Pa~i~~~~------~~~a 230 (354)
.+|+.++... +.+...-+|.|||-.+.+.|.-.. .+.+. +.+.+|+.- |- ++.-..+ .++-
T Consensus 261 h~dfqDi~svval~~Tyat~epFiDaKYDiriQKIG---~nYKa------ymRtsIsgn-WK-tNtGSamLEQIamseRy 329 (488)
T KOG3895 261 HEDFQDIASVVALTKTYATAEPFIDAKYDIRIQKIG---HNYKA------YMRTSISGN-WK-TNTGSAMLEQIAMSERY 329 (488)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHH---HHHHH------HHHHHHCCC-CC-CCCHHHHHHHHHHHHHH
T ss_conf 155676999999886232002343432200156540---46888------866531267-54-57208999999877889
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEC
Q ss_conf 99988677540246775310455388408999412
Q gi|254780158|r 231 HSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMA 265 (354)
Q Consensus 231 ~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEia 265 (354)
+.+...+.+-+|..-+.+|+-...+||+=|+.|+.
T Consensus 330 klwvdtcse~fGgldICav~alhsKdGrd~i~eV~ 364 (488)
T KOG3895 330 KLWVDTCSEMFGGLDICAVKALHSKDGRDYIIEVM 364 (488)
T ss_pred HHHHHHHHHHCCCCCEEEEEEEECCCCHHHEEEEC
T ss_conf 99999899762883246654210565502324312
No 173
>PRK04965 nitric oxide reductase; Provisional
Probab=94.59 E-value=0.084 Score=32.02 Aligned_cols=38 Identities=29% Similarity=0.304 Sum_probs=29.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCC
Q ss_conf 988789998098989999999988797--899996767771
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCP 39 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~p 39 (354)
|+++ |-|||+|.=|..++++.++++. ++.+++.++..|
T Consensus 1 M~~~-IVIIG~G~AG~~aa~~lR~~d~~~~Itvi~~e~~~~ 40 (378)
T PRK04965 1 MSNG-IVIIGSGFAARQLVKNIRKQDAHIPITLITADSGDE 40 (378)
T ss_pred CCCC-EEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
T ss_conf 9899-999988299999999997119498699998999988
No 174
>PRK08163 salicylate hydroxylase; Provisional
Probab=94.58 E-value=0.085 Score=31.97 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=33.3
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887-899980989899999999887978999967677
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|++. +|.|+|+|--|..++.+.++.|++|.+++..+.
T Consensus 1 M~~~~~V~IVGaGiaGL~lA~~L~r~Gi~v~V~Er~~~ 38 (396)
T PRK08163 1 MTHVTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAE 38 (396)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 98998499989788999999999978999999917998
No 175
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.54 E-value=0.24 Score=28.99 Aligned_cols=62 Identities=13% Similarity=0.075 Sum_probs=44.2
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHC----CC---EEEECCCCCHHHHHHHHH
Q ss_conf 88789998098-9899999999887978999967677713---422----68---279878999999999974
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQV----SN---QQIAARHDDIKALNTFAD 63 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~----ad---~~~~~~~~D~~~l~~~~~ 63 (354)
|+|+|.|.|++ -+|+.++....+.|+++++++.+.+.-. ..+ .+ ..+..|..|.+.+.++.+
T Consensus 1 t~K~vlITGAssGIG~alA~~la~~G~~v~l~~r~~~~l~~~~~el~~~~~~~~v~~~~~Dvsd~~~v~~~~~ 73 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFA 73 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 9998999478639999999999987998999989888999999999873799739999786786899999999
No 176
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.52 E-value=0.37 Score=27.64 Aligned_cols=66 Identities=17% Similarity=0.091 Sum_probs=48.2
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHC-CCEEEECCCCCHHHHHHHHHHC-CEEEE
Q ss_conf 8999809-89899999999887978999967677713422-6827987899999999997419-99998
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQV-SNQQIAARHDDIKALNTFADIC-DYATY 70 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~-ad~~~~~~~~D~~~l~~~~~~~-Dvit~ 70 (354)
+|+|.|+ |-+|+.++....+-|++|.+++.......... --.++.++..|.+...+..+.+ |+|..
T Consensus 2 ~iLVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih 70 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIH 70 (314)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEE
T ss_conf 699992887779999999985899799991787543112467643422533567899885458878998
No 177
>PRK08268 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.52 E-value=0.075 Score=32.33 Aligned_cols=39 Identities=23% Similarity=0.433 Sum_probs=34.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf 887899980989899999999887978999967677713
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA 40 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa 40 (354)
+-|||+|||+|..|+-.++.+..-|++|.++|.+++...
T Consensus 2 ~i~~VaViGaGtMG~gIA~~~a~aG~~V~l~D~~~~~l~ 40 (503)
T PRK08268 2 SIATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAA 40 (503)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
T ss_conf 967899979688999999999938990899979989999
No 178
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=94.48 E-value=0.11 Score=31.26 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=63.1
Q ss_pred CCCC--EEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCHH---HCCC--------EEEECCCCCHHHHHHHHHHC
Q ss_conf 9887--89998098989999999988797--89999676777134---2268--------27987899999999997419
Q gi|254780158|r 1 MKKK--TIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPAN---QVSN--------QQIAARHDDIKALNTFADIC 65 (354)
Q Consensus 1 M~~k--~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa~---~~ad--------~~~~~~~~D~~~l~~~~~~~ 65 (354)
|++| +|+|||+|..|..++.++...|+ +++.+|.+++-.-. .+.| ....+ |.+ -++.+
T Consensus 2 m~~k~~KI~IIGaG~VG~~~a~~l~~~~l~~el~LiD~~~~~a~g~a~Dl~h~~~~~~~~~i~~g---dy~----~~~da 74 (315)
T PRK00066 2 MKKKHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---DYS----DCKDA 74 (315)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEC---CHH----HHCCC
T ss_conf 88789849999979889999999986699888999808987107899988854123688479739---999----96799
Q ss_pred CEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHH-HHCCHHHHHHHHHCCCCCCC--CCCCCHHHHHHHHH--HCCCCE
Q ss_conf 999987722211333444302003487677876-31527888887650588674--32100068888641--001312
Q gi|254780158|r 66 DYATYESENIPEKSISYLSTLLPTYPSSRAIEI-SQDRLYEKKFFQESGLTTVD--FYEINSQESLTNIL--GGFKGK 138 (354)
Q Consensus 66 Dvit~E~E~i~~~~l~~l~~~~~v~P~~~al~~-~~dK~~~K~~l~~~gipt~~--~~~v~s~~el~~~~--~~~g~P 138 (354)
|+|..... .+--|+-.-+.. ..|-...|.+..+..--.|. +..++|+-|+...+ +..|||
T Consensus 75 DvVVitAG-------------~~~k~g~tR~dll~~N~~I~~~i~~~i~~~~p~~i~ivvtNPvDvmt~~~~k~sg~p 139 (315)
T PRK00066 75 DLVVITAG-------------APQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYATWKFSGFP 139 (315)
T ss_pred CEEEECCC-------------CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCC
T ss_conf 99998999-------------989999987899987899999988776424885399993691899999999974998
No 179
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=94.47 E-value=0.43 Score=27.21 Aligned_cols=124 Identities=19% Similarity=0.152 Sum_probs=61.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHC---CCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE--CCCCC
Q ss_conf 9887899980989899999999887---978999967677713422682798789999999999741999998--77222
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARL---GFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY--ESENI 75 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~l---G~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~--E~E~i 75 (354)
|+ +||||+|.|-+|+.++.+...- ++++.++......-...++... ...++.+.+ ++.+||+|.= -.+.+
T Consensus 1 M~-~rVgiiG~GAIG~~Va~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~l--la~~pDlVvE~As~~Av 75 (267)
T PRK13301 1 MT-HRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGRV--ALLDGLPGL--LAWRPDLVVEAAGQQAI 75 (267)
T ss_pred CC-EEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCC--CCCCCHHHH--HCCCCCEEEECCCHHHH
T ss_conf 95-17999851699999999986177765289998153355555532566--545775777--41289999989798999
Q ss_pred CHHHHHHHHHCCCCC-CCHHHHHHHHCCHHHHHH---HHHCCCC-CCCCCCCCHHHHHHHHH
Q ss_conf 113334443020034-876778763152788888---7650588-67432100068888641
Q gi|254780158|r 76 PEKSISYLSTLLPTY-PSSRAIEISQDRLYEKKF---FQESGLT-TVDFYEINSQESLTNIL 132 (354)
Q Consensus 76 ~~~~l~~l~~~~~v~-P~~~al~~~~dK~~~K~~---l~~~gip-t~~~~~v~s~~el~~~~ 132 (354)
...+...|+.+..+. -|.-++ .|+.+..++ .++.|-. ..|...+-.+|-+..+.
T Consensus 76 ~~~a~~vL~~G~dlvv~SvGAL---aD~~l~~~l~~~A~~~g~~i~ipsGAIgGlD~l~aa~ 134 (267)
T PRK13301 76 AEHAEGCLTAGLDMIICSAGAL---ADDALRARLIAAAEAGGARIRVPAGAIAGLDYLQAVA 134 (267)
T ss_pred HHHHHHHHHCCCCEEEECHHHH---CCHHHHHHHHHHHHHCCCEEEECCCHHHCHHHHHHHH
T ss_conf 9999999975996999823784---7988999999999977986997473010468999875
No 180
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=94.46 E-value=0.093 Score=31.70 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=11.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 89998098989999999988797899996
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILD 33 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d 33 (354)
++.|+|||-+|.+++.+.+++|.+|.+++
T Consensus 139 ~vvViGgG~IGlE~A~~l~~~G~~Vtvve 167 (427)
T TIGR03385 139 RVVIIGGGYIGLEMVEALRERGKNVTLIH 167 (427)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 89999963999999999997699899998
No 181
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.27 Score=28.64 Aligned_cols=62 Identities=21% Similarity=0.200 Sum_probs=40.0
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHCC---CEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-9899999999887978999967677713---4226---8279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQVS---NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~a---d~~~~~~~~D~~~l~~~~~ 63 (354)
|++ ||.|.|++ -+|+.++....+.|+++++++.+.+.-. .++. -..+..|..|.+.+.++.+
T Consensus 1 M~~-~VlITGassGIG~a~A~~la~~G~~v~l~~R~~~~L~~~~~~~~~~~~~~~~~Dv~d~~~~~~~~~ 69 (256)
T PRK07024 1 MPL-KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKARVSVYAADVRDADALAAAAA 69 (256)
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
T ss_conf 999-899984602999999999998899899998988999999997679976999811799999999999
No 182
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=94.43 E-value=0.096 Score=31.62 Aligned_cols=56 Identities=21% Similarity=0.157 Sum_probs=31.2
Q ss_pred CCCCCCEEEECCCCEEE-EEEECCCCCCCEEE-EHHHC--CCCHHHHHHHHHHCCCCCCC
Q ss_conf 67753104553884089-99412570456046-21001--35889999999818899970
Q gi|254780158|r 244 VGILCIEFFVTNDGNVI-ANEMAPRVHNSGHW-TEASC--VISQFEQHIRSITNLPLGNP 299 (354)
Q Consensus 244 ~Gv~~VEffv~~dg~i~-vnEiaPR~Hnsgh~-t~~~~--~~sqfe~h~rai~glpl~~~ 299 (354)
-|+..=|++-|.+-.|| +-.+|-.++.+|.+ -++.- ...|=..-.+.++|.+.+..
T Consensus 255 ~GI~VD~~~~Ts~p~IyAaGDvA~~~~~~g~~~r~e~w~~A~~qg~~aa~nm~G~~~~~~ 314 (400)
T PRK09754 255 NGIVIDEACRTCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQIAAAAMLGLPLPLL 314 (400)
T ss_pred CEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 939999787648989999955203548888887723657888999999998429998878
No 183
>KOG1201 consensus
Probab=94.43 E-value=0.14 Score=30.59 Aligned_cols=63 Identities=19% Similarity=0.320 Sum_probs=48.3
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHCC----CEEEECCCCCHHHHHHHHHH
Q ss_conf 88789998098-9899999999887978999967677713---4226----82798789999999999741
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQVS----NQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~a----d~~~~~~~~D~~~l~~~~~~ 64 (354)
+.++++|=||| -|||.++++..++|-.+++.|-+.++-- .... -..+..|..|.+.+.+.+++
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~ 107 (300)
T KOG1201 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKK 107 (300)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 69889996898607899999999707848999556512399999998448525899558988999999999
No 184
>pfam03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent.
Probab=94.39 E-value=0.062 Score=32.89 Aligned_cols=62 Identities=23% Similarity=0.277 Sum_probs=39.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEE-ECCCCCCHHHCCCEEE-ECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 8999809898999999998879789999-6767771342268279-8789999999999741999998
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVIL-DPDSNCPANQVSNQQI-AARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~-d~~~~~pa~~~ad~~~-~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
||||||+|..|..++....+.|++++.. +++++. ...+++..- .....| ..+.++.||+|..
T Consensus 1 KIg~IG~G~mg~ai~~~l~~~g~~~~~~~~r~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~DvIil 64 (93)
T pfam03807 1 KIGIIGAGNMGEALARGLAAAGHEVIIANSRNPEK-AAALAEELGVGATAVS---NEEAAEEADVVIL 64 (93)
T ss_pred CEEEECCHHHHHHHHHHHHHCCCCCEEEECCCHHH-HHHHHHHHCCCCCCCC---HHHHHHCCCEEEE
T ss_conf 98999700999999999997799612786487899-9999998199764589---9999744998999
No 185
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.36 E-value=0.39 Score=27.49 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=32.0
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|++|++.|-|++ -+|+.++.+..+.|+.|++.+.+.+
T Consensus 1 l~~K~alITGassGIG~a~A~~la~~G~~V~~~~r~~~ 38 (280)
T PRK06914 1 MNKKIAIITGASSGFGLLTTLELAKKDYLVIATMRNLE 38 (280)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 95198999073449999999999987998999989889
No 186
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.35 E-value=0.21 Score=29.30 Aligned_cols=36 Identities=14% Similarity=0.325 Sum_probs=30.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098-989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+.|++.|.|++ -+|+.++.+..+.|++|+..+.+.
T Consensus 5 LkgK~~lITGas~GIG~aia~~la~~G~~V~~~~~~~ 41 (250)
T PRK12825 5 LSGRVALVTGAARGIGRAIALRLAAAGADVIVHPPSD 41 (250)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 0978899938955899999999998799899997988
No 187
>pfam01408 GFO_IDH_MocA Oxidoreductase family, NAD-binding Rossmann fold. This family of enzymes utilize NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot.
Probab=94.33 E-value=0.092 Score=31.74 Aligned_cols=64 Identities=25% Similarity=0.319 Sum_probs=39.4
Q ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEE-EEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 899980989899999999887--97899-9967677713422682798789999999999741999998
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARL--GFCTV-ILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~l--G~~v~-v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
+|||+|.|.-|+..+.+.+.. +++++ ++|++.+ -+..+++.+-.-.|+|.+.+.+- ..+|++..
T Consensus 2 ki~iiG~G~~g~~~~~~~~~~~~~~~i~ai~d~~~~-~~~~~~~~~~~~~~~~~~~~l~~-~~iD~v~I 68 (120)
T pfam01408 2 RVGIVGAGKIGRRHLRALNESQDGAELVGVLDPDPA-RAEAVAESFGVPAYSDLEELLAD-PDVDAVSV 68 (120)
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCHH-HHHHHHHHHCCCEECCHHHHHHC-CCCCEEEE
T ss_conf 899990779999999999855999789999829999-99999998399678869999737-78898999
No 188
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.26 E-value=0.15 Score=30.37 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=43.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC---EEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 88789998098989999999988797899996767771342268---2798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSN---QQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad---~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
..|||+|+|-|-.|+-.+..+.+.|++|.++|...+.+...... ....+... .+....+|+|..
T Consensus 5 ~~k~v~V~GlG~sG~s~~~~L~~~G~~v~~~D~~~~~~~~~~l~~~~~~~~g~~~-----~~~~~~~d~vV~ 71 (438)
T PRK03806 5 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPENVERHTGSLN-----DEWLLAADLIVA 71 (438)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCEEECCCC-----HHHHCCCCEEEE
T ss_conf 8998999945788899999999789969999899990057886458846657779-----668067999998
No 189
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.25 E-value=0.48 Score=26.90 Aligned_cols=62 Identities=16% Similarity=0.078 Sum_probs=48.8
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 988789998098-98999999998879789999676777134226827987899999999997419
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADIC 65 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~ 65 (354)
++.|++.|-|++ -+|+.+++...+.|.+|+++|.++... -.+.++..|..|.+.+.++++++
T Consensus 3 L~gK~alVTG~s~GIG~aia~~la~~GA~V~~~d~~~~~~---~~~~~~~~D~~~~~~v~~~v~~~ 65 (261)
T PRK12428 3 LDGKTIVVTGVASGIGAEVARLLRFLGARVIGLDRRPPGM---TLDGFHQADLGDPASIDAAVAAL 65 (261)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC---CCCCEEECCCCCHHHHHHHHHHH
T ss_conf 9998899978577999999999998699999996885545---61317673789999999999983
No 190
>PRK06182 short chain dehydrogenase; Validated
Probab=94.23 E-value=0.24 Score=28.93 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=31.1
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098-989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|++|++.|-|++ -+|+.++....+.|++|++.+.+.
T Consensus 1 mk~Kv~lITGassGIG~a~a~~la~~G~~V~~~~r~~ 37 (273)
T PRK06182 1 MKKKVALVTGASSGIGKATARKLIAEGFTVYGAARRV 37 (273)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 9469899906320999999999998799899997989
No 191
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.23 E-value=0.086 Score=31.95 Aligned_cols=62 Identities=19% Similarity=0.379 Sum_probs=44.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 7899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
-|||+||=|..|.-|+.-..+.|++|.++|.++.. +..+...- -.-.+...++++.||+|..
T Consensus 2 MkIgfIGlG~MG~~ma~~L~~~G~~v~v~dr~~~~-~~~l~~~G----a~~~~s~~e~~~~~dvvi~ 63 (295)
T PRK11559 2 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEA-IADVIAAG----AETASTAKAIAEQCDVIIT 63 (295)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHCC----CCCCCCHHHHHHCCCEEEE
T ss_conf 78999840576999999999789958999299999-99999859----9203999999843887899
No 192
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=94.17 E-value=0.11 Score=31.26 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=29.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCC
Q ss_conf 988789998098989999999988797--899996767771
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCP 39 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~p 39 (354)
|+| |-|||+|.-|...+..+++++. ++.+++.++.-|
T Consensus 1 M~k--iVIIG~g~AG~~aA~~lrk~~~~~eItvi~~e~~~~ 39 (438)
T PRK13512 1 MPK--IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS 39 (438)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 980--999898499999999999439199999996899888
No 193
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=94.11 E-value=0.17 Score=30.03 Aligned_cols=39 Identities=28% Similarity=0.652 Sum_probs=33.5
Q ss_pred CCCCE--EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 98878--9998098989999999988797899996767771
Q gi|254780158|r 1 MKKKT--IGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 1 M~~k~--IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
|+.+. |.|+|+|--|..++.+..+.|++|.+++..+..+
T Consensus 1 M~~~~~DV~IvG~G~vGl~lAl~La~~G~~V~viE~~~~~~ 41 (391)
T PRK08020 1 MTNQPTEIAIVGGGMVGGALALGLAQHGFSVAVIEHAAPAP 41 (391)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 99999848999936999999999986699789994899876
No 194
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=94.10 E-value=0.12 Score=31.05 Aligned_cols=66 Identities=17% Similarity=0.255 Sum_probs=40.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHH---CCCE-------EEECCCCCHHHHHHHHHHCCEEE
Q ss_conf 988789998098989999999988797-899996767771342---2682-------79878999999999974199999
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSNCPANQ---VSNQ-------QIAARHDDIKALNTFADICDYAT 69 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~~pa~~---~ad~-------~~~~~~~D~~~l~~~~~~~Dvit 69 (354)
|+++||+|||+|..|.-++..+...|+ +++.+|.+++-+..+ +.+- ..+....|.+. .+.+|+|.
T Consensus 5 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~eivLiDi~~~~a~g~a~Dl~h~~~~~~~~~~v~~~~dy~~----~~~aDiVV 80 (322)
T PTZ00082 5 IPRKKISLIGSGNIGGVMAYLIQLKNLADVVLFDIVPNIPAGKALDIMHANVMAGSNCKVIGTNSYDD----IAGSDVVI 80 (322)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEECCCHHH----HCCCCEEE
T ss_conf 17982999896989999999996389977999978898008899987663644688857983799999----77999999
Q ss_pred E
Q ss_conf 8
Q gi|254780158|r 70 Y 70 (354)
Q Consensus 70 ~ 70 (354)
.
T Consensus 81 i 81 (322)
T PTZ00082 81 V 81 (322)
T ss_pred E
T ss_conf 8
No 195
>PRK08177 short chain dehydrogenase; Provisional
Probab=94.07 E-value=0.29 Score=28.35 Aligned_cols=62 Identities=19% Similarity=0.098 Sum_probs=40.5
Q ss_pred CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCC-HHH-C-CCEEEECCCCCHHHHHHHHHH
Q ss_conf 8789998098-989999999988797899996767771-342-2-682798789999999999741
Q gi|254780158|r 3 KKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCP-ANQ-V-SNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 3 ~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~p-a~~-~-ad~~~~~~~~D~~~l~~~~~~ 64 (354)
||++.|-|++ -+|+.++....+.|++|++.+.+++.. +.+ . .......|.+|.+.+.++.+.
T Consensus 1 KK~~lITGas~GIG~aia~~l~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 66 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIERLDMNDPASLDQLLQR 66 (225)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
T ss_conf 998999273429999999999988699999979887789987254872899845888999999999
No 196
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.07 E-value=0.22 Score=29.21 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=29.7
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9887899980989-89999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQ-LARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+.|++.|-|+++ +|+.++++..+.|.+|++.+.+.
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~i~~~~~ 40 (254)
T PRK08642 4 ISEQIVLVTGGSRGLGAAIARAFAREGARVVVNYHRS 40 (254)
T ss_pred CCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 8989999978111999999999998799999961898
No 197
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=94.06 E-value=0.35 Score=27.87 Aligned_cols=15 Identities=20% Similarity=0.321 Sum_probs=7.9
Q ss_pred CHHHHHHHHHHCCCC
Q ss_conf 889999999818899
Q gi|254780158|r 282 SQFEQHIRSITNLPL 296 (354)
Q Consensus 282 sqfe~h~rai~glpl 296 (354)
.+|+.-++.+..-.+
T Consensus 294 ~~~~~~l~li~~g~i 308 (343)
T PRK09880 294 SEFNTAVSWLANGVI 308 (343)
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999985999
No 198
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.06 E-value=0.39 Score=27.49 Aligned_cols=37 Identities=24% Similarity=0.167 Sum_probs=32.3
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|+.|++.|-|++ -+|+.++++..+.|++|++.+.+.+
T Consensus 1 m~gKv~lITGassGIG~a~A~~la~~G~~Vv~~~R~~~ 38 (275)
T PRK08263 1 MMGKVWFITGASRGFGREWTEAALERGDRVVATARDTA 38 (275)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 98998999467439999999999987998999979899
No 199
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.43 Score=27.20 Aligned_cols=37 Identities=30% Similarity=0.393 Sum_probs=31.1
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|+.|++.|-|++ -+|+..++...+.|.+|++.+.+.+
T Consensus 3 L~gK~alVTG~s~GIG~aia~~la~~Ga~V~i~~r~~~ 40 (258)
T PRK07890 3 LKDKVVVVSGVGPGLGTTLAVRAAREGADVVLAARTAE 40 (258)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89988999685658999999999987998999979899
No 200
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.03 E-value=0.53 Score=26.62 Aligned_cols=69 Identities=17% Similarity=0.176 Sum_probs=48.3
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHH-HCC-CEEEEEECCCCCCH---HHCC---CEEEECCCCCHHHHHHHHHHCCEEE
Q ss_conf 98878999809-898999999998-879-78999967677713---4226---8279878999999999974199999
Q gi|254780158|r 1 MKKKTIGIIGG-GQLARMLSMSAA-RLG-FCTVILDPDSNCPA---NQVS---NQQIAARHDDIKALNTFADICDYAT 69 (354)
Q Consensus 1 M~~k~IgIlG~-GqL~rml~~aA~-~lG-~~v~v~d~~~~~pa---~~~a---d~~~~~~~~D~~~l~~~~~~~Dvit 69 (354)
++.|+|+|-|| |-.|..++...- +.+ ..+++++.+..... .... -.++.+|..|.+.+....+.+|+|.
T Consensus 2 ~~~K~ILVTGGaGfIGS~lv~~Ll~~~~~~~iii~~~de~~~~~l~~~~~~~~i~f~~gDIrD~~~l~~~~~~vD~Vf 79 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVV 79 (324)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCEEE
T ss_conf 993999990797799999999999729982899966864032889851689875999677778899997634888999
No 201
>PRK08774 consensus
Probab=94.03 E-value=0.12 Score=30.96 Aligned_cols=37 Identities=22% Similarity=0.484 Sum_probs=33.0
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887-899980989899999999887978999967677
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|++. -|.|+|||--|.+++.+..+.|++|.+++..+.
T Consensus 1 M~~~~DVlIVGgGpvGl~lA~~La~~G~~v~liE~~~~ 38 (402)
T PRK08774 1 MTHPHDVLIVGGGLVGSSLAIALDRIGLDVGLVEATPA 38 (402)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 98998789999169999999999668997899937998
No 202
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.01 E-value=0.23 Score=29.10 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=30.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 78999809898999999998879789999676777
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+|+|+|.|..|+-.+...+++|++|.+.|.++..
T Consensus 13 k~V~V~GlG~sG~a~a~~L~~~G~~v~~~D~~~~~ 47 (487)
T PRK03369 13 APVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDA 47 (487)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCHH
T ss_conf 98999915683899999999786979999898257
No 203
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.99 E-value=0.14 Score=30.42 Aligned_cols=65 Identities=17% Similarity=0.286 Sum_probs=44.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 789998098989999999988797899996767771342268279878999999999974199999877
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYES 72 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~ 72 (354)
-+|+|+|-|..|-=++.+.++.|++|+.+|+++..-........+.....|.+ .++.+|+|..-.
T Consensus 2 mkI~IiGlGLIGgSla~al~~~~~~V~g~d~~~~~~~~A~~~g~id~~~~~~~----~~~~aDliila~ 66 (280)
T PRK07417 2 MNIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLS----LLKDCDLVILAL 66 (280)
T ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEECCCHH----HHCCCCEEEECC
T ss_conf 78999931857999999999689979999799999999998699752027874----605799899879
No 204
>PRK06834 hypothetical protein; Provisional
Probab=93.98 E-value=0.12 Score=30.89 Aligned_cols=37 Identities=27% Similarity=0.383 Sum_probs=34.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|++..|.|+|+|--|.+++....+.|+++.+++..++
T Consensus 1 M~~~dVlIVGaGPvGL~lA~~La~~Gi~v~viE~~~~ 37 (488)
T PRK06834 1 MTEHAVVIAGGGPTGLMLAGELALAGVDVAIVERRVD 37 (488)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 9989899989388999999999976999999968999
No 205
>PRK06483 short chain dehydrogenase; Provisional
Probab=93.95 E-value=0.37 Score=27.66 Aligned_cols=63 Identities=17% Similarity=0.176 Sum_probs=44.5
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHH---CCCEEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771342---2682798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQ---VSNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~---~ad~~~~~~~~D~~~l~~~~~~ 64 (354)
|+ |||.|-|++ -+|+.+++...+.|++|++.+.++..-... ..-..+.+|..|.+.+.++.+.
T Consensus 1 M~-ktVlVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~l~~~~~~~~~~Dv~~~~~v~~~~~~ 67 (236)
T PRK06483 1 MS-APILITGAGQRIGLALAKHLLAQGQPVIVSYRSHYPAIDELRQAGATCIQADFSTNAGIMAFIDE 67 (236)
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
T ss_conf 99-87999789988999999999988998999959847999999856998999227999999999999
No 206
>PRK07677 short chain dehydrogenase; Provisional
Probab=93.94 E-value=0.19 Score=29.68 Aligned_cols=37 Identities=27% Similarity=0.367 Sum_probs=32.0
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|++|++.|-||+ -+|+-++....+.|.+|++.+.+.+
T Consensus 1 L~gK~alVTGgs~GIG~aia~~la~~Ga~V~i~~r~~~ 38 (254)
T PRK07677 1 MKEKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKE 38 (254)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 95298999587678999999999987999999969999
No 207
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.93 E-value=0.29 Score=28.43 Aligned_cols=63 Identities=14% Similarity=0.150 Sum_probs=42.2
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---HC----CCEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134---22----68279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---QV----SNQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~----ad~~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-|++ -+|+.++....+.|.+|++++.+++.... .+ .-..+..|..|.+.+.++.+
T Consensus 3 l~gK~~lVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~Dvs~~~~v~~~~~ 73 (238)
T PRK05786 3 LKGKNVLIVGVSPGLGYAVAYFALREGASVYAFARSEEKLKEIKKTLAKYGNVIYVVGDVSKLEGAREAAE 73 (238)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 79988999289878999999999987999999969889999999987435977999757899999999999
No 208
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=93.92 E-value=0.24 Score=28.89 Aligned_cols=37 Identities=11% Similarity=0.162 Sum_probs=31.0
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|+.|++.|-||+ -+|+.++....+.|.+|++.+.+.+
T Consensus 12 L~gK~alITGgs~GIG~~ia~~la~~Ga~V~i~~r~~~ 49 (259)
T PRK06124 12 LAGQVALVTGSARGLGLEIARALAEAGAHVLVNGRNAA 49 (259)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 99998999286748999999999987999999969889
No 209
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=93.88 E-value=0.2 Score=29.49 Aligned_cols=34 Identities=29% Similarity=0.399 Sum_probs=31.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+. |.|+|+|--|.++|.+..+.|++|.++++.+
T Consensus 1 m~D--V~IvGaG~vGl~lAl~La~~g~~v~lie~~~ 34 (374)
T PRK06617 1 MSN--TVILGCGLSGMLTALSFAQKGIKTTIFESKS 34 (374)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 962--9999966999999999985799699997899
No 210
>KOG2614 consensus
Probab=93.87 E-value=0.21 Score=29.26 Aligned_cols=115 Identities=17% Similarity=0.201 Sum_probs=57.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHH--HHCCEEEECCC---CCCH
Q ss_conf 878999809898999999998879789999676777134226827987899999999997--41999998772---2211
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFA--DICDYATYESE---NIPE 77 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~--~~~Dvit~E~E---~i~~ 77 (354)
+.+|.|+|||--|.-.|.+++++|++|.|++...+.-+. -..+....+-..+++++. +...-+..+.+ .+..
T Consensus 2 ~~~VvIvGgGI~Gla~A~~l~r~G~~v~VlE~~e~~R~~---g~si~L~~ng~~aLkai~~~e~i~~~gip~~~~v~~~~ 78 (420)
T KOG2614 2 EPKVVIVGGGIVGLATALALHRKGIDVVVLESREDPRGE---GTSINLALNGWRALKAIGLKEQIREQGIPLGGRVLIHG 78 (420)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC---CCCEEEHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEC
T ss_conf 974899888389899999998758748998621465558---84112144289999872618999971675565264314
Q ss_pred HHHHHHHHCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 3334443020034-8767787631527888887650588674321
Q gi|254780158|r 78 KSISYLSTLLPTY-PSSRAIEISQDRLYEKKFFQESGLTTVDFYE 121 (354)
Q Consensus 78 ~~l~~l~~~~~v~-P~~~al~~~~dK~~~K~~l~~~gipt~~~~~ 121 (354)
+.-.... ..++. |+...+++.+-+..+-.+..+..=++-+|..
T Consensus 79 ~sg~~~~-~~~~~~~~~~i~r~~~r~ll~~lL~~a~~~~~ikf~~ 122 (420)
T KOG2614 79 DSGKEVS-RILYGEPDEYILRINRRNLLQELLAEALPTGTIKFHS 122 (420)
T ss_pred CCCCEEE-ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 7887567-4015883577778889999999997316887155121
No 211
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=93.76 E-value=0.15 Score=30.37 Aligned_cols=37 Identities=24% Similarity=0.454 Sum_probs=32.5
Q ss_pred CCCCE--EEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 98878--99980989899999999887978999967677
Q gi|254780158|r 1 MKKKT--IGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~--IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|++++ |.|+|+|--|..++.+..+.|++|.++|+.+.
T Consensus 1 M~~~~~DV~IvGaGp~Gl~lAl~La~~G~~v~lie~~~~ 39 (386)
T PRK07494 1 MEKEHTDIAVSGGGPAGLAAAIALASAGASVALVAPAPP 39 (386)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 997888689999068999999999878998899957998
No 212
>TIGR02053 MerA mercuric reductase; InterPro: IPR011796 This entry represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH .; GO: 0016152 mercury (II) reductase activity, 0045340 mercury ion binding, 0050660 FAD binding, 0050661 NADP binding, 0006118 electron transport, 0050787 detoxification of mercury ion.
Probab=93.75 E-value=0.052 Score=33.42 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=20.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEECCC
Q ss_conf 8999809898999999998879---7899996767
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLG---FCTVILDPDS 36 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG---~~v~v~d~~~ 36 (354)
.+.|||+|==|---+.+|.++| -+|.++..-+
T Consensus 2 d~~iiG~GaAAfaAai~A~e~GsGqa~v~mv~~G~ 36 (494)
T TIGR02053 2 DLVIIGSGAAAFAAAIKAAELGSGQAKVAMVERGP 36 (494)
T ss_pred EEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf 18998276899999999985488715999963789
No 213
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=93.75 E-value=0.25 Score=28.84 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=32.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 98878999809898999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|+|--|.|+|+|--|..+|.+..+.|++|.+++..
T Consensus 1 M~~~DV~IvGaG~vGl~lAl~La~~G~~V~iiE~~ 35 (384)
T PRK08849 1 MNKYDIAVVGGGMVGAATAIGFAKQGRSVAVIEGF 35 (384)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 98189999992499999999999579959999689
No 214
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=93.70 E-value=0.53 Score=26.60 Aligned_cols=11 Identities=18% Similarity=0.486 Sum_probs=5.7
Q ss_pred CHHHHHHHHHH
Q ss_conf 88999999981
Q gi|254780158|r 282 SQFEQHIRSIT 292 (354)
Q Consensus 282 sqfe~h~rai~ 292 (354)
..|++-++-+.
T Consensus 249 ~~~~~ai~ll~ 259 (280)
T TIGR03366 249 RHLDQAVRFLA 259 (280)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 215
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.65 E-value=0.29 Score=28.38 Aligned_cols=63 Identities=22% Similarity=0.259 Sum_probs=41.4
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH------HCC--CEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134------226--8279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN------QVS--NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~------~~a--d~~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.|.+++.... ... -..+.+|..|.+.+.++.+
T Consensus 3 L~gK~~lITGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~ 74 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAQCAALGGEAEVYAANVTDEEDVEATFA 74 (253)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 899889994887789999999999879989999799999999999999659948999824799999999999
No 216
>PRK01747 mnmC 5-methylaminomethyl-2-thiouridine methyltransferase; Reviewed
Probab=93.64 E-value=0.17 Score=30.00 Aligned_cols=34 Identities=29% Similarity=0.572 Sum_probs=30.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 8789998098989999999988797899996767
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
.++|.|||+|--|.-+|.+..+.|++|.|+|..+
T Consensus 256 ~~~VaVIGAGIAGas~A~~LA~rG~~VtVlDr~~ 289 (660)
T PRK01747 256 NRDAAIIGGGIAGAALALALARRGWQVTLYEADE 289 (660)
T ss_pred CCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 8718998938999999999997899689994798
No 217
>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase; InterPro: IPR010233 This entry represents an O-methyltransferase, which is believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and mitochondria (COQ3) , . A separate methylase (MenG/UbiE) catalyses the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.; GO: 0008425 2-polyprenyl-6-methoxy-14-benzoquinone methyltransferase activity, 0006744 ubiquinone biosynthetic process.
Probab=93.58 E-value=0.089 Score=31.83 Aligned_cols=102 Identities=21% Similarity=0.218 Sum_probs=66.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE-EEEEECCCCCCH--HHCCCEEEE-------CCCCCHHHHHHHH------HHCC
Q ss_conf 87899980989899999999887978-999967677713--422682798-------7899999999997------4199
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFC-TVILDPDSNCPA--NQVSNQQIA-------ARHDDIKALNTFA------DICD 66 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~-v~v~d~~~~~pa--~~~ad~~~~-------~~~~D~~~l~~~~------~~~D 66 (354)
.++|+=+||| |--|+++..|+|.. |..+|..+++.. ...|++.-. ++|. -.++++++ ++-|
T Consensus 85 G~~vLDVGCG--GGlLsE~lAR~Ga~~V~GID~~~~~i~~Ak~Ha~~~~~~~~~~K~i~Y~-~~~~E~l~~~~h~~~~FD 161 (275)
T TIGR01983 85 GLRVLDVGCG--GGLLSEPLARLGANKVTGIDASEENIEVAKLHAKKDPLQEALDKKIEYR-CTSVEELAEEQHTKKSFD 161 (275)
T ss_pred CCEEEEECCC--HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHCCCCCCCCCC
T ss_conf 9779984278--5788899975588425775211779999998887334023311114544-430788730557841573
Q ss_pred EEEE-C-CCCCCH--HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHH
Q ss_conf 9998-7-722211--333444302003487677876315278888876
Q gi|254780158|r 67 YATY-E-SENIPE--KSISYLSTLLPTYPSSRAIEISQDRLYEKKFFQ 110 (354)
Q Consensus 67 vit~-E-~E~i~~--~~l~~l~~~~~v~P~~~al~~~~dK~~~K~~l~ 110 (354)
+||. | .|||+. ..+..+.+.+ -|+-..+-.+-||-. |.|+-
T Consensus 162 ~V~~mEvlEHV~dp~~f~~~c~~ll--kPgG~lF~STINRt~-kS~~~ 206 (275)
T TIGR01983 162 VVTCMEVLEHVPDPQAFIKACAQLL--KPGGILFFSTINRTP-KSYLL 206 (275)
T ss_pred EEEEEEEEECCCCHHHHHHHHHHHC--CCCCCEEEECCCHHH-HHHHH
T ss_conf 3764320000278889999999850--899848973000218-99999
No 218
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.58 E-value=0.58 Score=26.38 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=29.0
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 988789998098-9899999999887978999967
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDP 34 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~ 34 (354)
|+.|++.|-||+ -+|+.++.+..+.|..|++...
T Consensus 1 L~gKvalITGgs~GIG~aiA~~la~~Ga~V~i~~~ 35 (249)
T PRK06077 1 LKDKVVVVTGSGRGIGRAIAVRLAKEGAKVVVNAK 35 (249)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 96198999263678999999999987998999848
No 219
>PRK09072 short chain dehydrogenase; Provisional
Probab=93.57 E-value=0.24 Score=28.97 Aligned_cols=62 Identities=10% Similarity=0.123 Sum_probs=41.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---HC---CCEEEECCCCCHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134---22---6827987899999999997
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---QV---SNQQIAARHDDIKALNTFA 62 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~---ad~~~~~~~~D~~~l~~~~ 62 (354)
|+.|++.|-|++ -+|+.++....+.|++|++++.+.+.-.. .. .-..+..|..|.+.+..+.
T Consensus 3 l~~K~vlITGassGIG~a~A~~la~~G~~vil~~R~~~~L~~~~~~l~~~~~~~~~~Dls~~~~~~~~~ 71 (262)
T PRK09072 3 LKDKRVLLTGASGGIGEALAEALCAAGARLLLVGRNAEKLEALAARPYPGRVRWVVADLTSEAGREAVL 71 (262)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
T ss_conf 899889994862399999999999879989999898999999999845897699997179999999999
No 220
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=93.57 E-value=0.21 Score=29.31 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=32.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf 887899980989899999999887978999967677713
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA 40 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa 40 (354)
+.|||.|||||-=|.--|..+.++||+|.+++..+..-+
T Consensus 142 ~gkkVAVIGsGPAGLsaA~~Lar~G~~VtVfE~~~~~GG 180 (472)
T PRK12810 142 TGKKVAVVGSGPAGLAAADQLARAGHKVTVFERDDRIGG 180 (472)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
T ss_conf 899899989778999999999866975899725777775
No 221
>PRK11749 putative oxidoreductase; Provisional
Probab=93.55 E-value=0.21 Score=29.31 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=32.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf 887899980989899999999887978999967677713
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA 40 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa 40 (354)
+.|||.|||||--|.--|..+.++|++|.+++..+..-+
T Consensus 139 ~gkkVAIIGaGPAGLsAA~~Lar~G~~VtVfE~~~~~GG 177 (460)
T PRK11749 139 TGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG 177 (460)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC
T ss_conf 899899989678999999999976984799704787875
No 222
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.53 E-value=0.3 Score=28.29 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=27.7
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++|...|-||+ -+|+.++.+..+.|++|++.+...+
T Consensus 4 ~~KValVTGgs~GIG~aia~~la~~Ga~V~i~~~~~~ 40 (259)
T PRK12745 4 TRPVALVTGGRRGIGLGIALALAAGGFDLAINDRPDA 40 (259)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf 9999999686789999999999987998999979866
No 223
>PRK06180 short chain dehydrogenase; Provisional
Probab=93.52 E-value=0.51 Score=26.72 Aligned_cols=37 Identities=27% Similarity=0.170 Sum_probs=29.6
Q ss_pred CC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 98-8789998098-9899999999887978999967677
Q gi|254780158|r 1 MK-KKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~-~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|+ .|++.|-|++ -+|+.++....+.|++|++.+.+.+
T Consensus 1 M~~~KvvlITGassGIG~aiA~~l~~~G~~Vi~~~R~~~ 39 (277)
T PRK06180 1 MASMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSAA 39 (277)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 999988999178739999999999987999999989999
No 224
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.51 E-value=0.4 Score=27.45 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=28.5
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEE
Q ss_conf 988789998098-989999999988797899996
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILD 33 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d 33 (354)
|++|+..|-||+ -+|+.+++...+-|++|++.+
T Consensus 1 L~~KvalVTGgs~GIG~aia~~la~~Ga~Vv~~~ 34 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGC 34 (246)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEC
T ss_conf 9509899918586999999999998799899947
No 225
>pfam00070 Pyr_redox Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=93.50 E-value=0.14 Score=30.57 Aligned_cols=33 Identities=18% Similarity=0.424 Sum_probs=29.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 899980989899999999887978999967677
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
||.|+|||-.|.++|.+..++|.+|.++++.+.
T Consensus 1 rv~iiGgG~ig~E~A~~l~~~G~~Vtiie~~~~ 33 (82)
T pfam00070 1 RVVVVGGGYIGLEFASALAKLGSKVTVVERRDR 33 (82)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 999999889999999999863927899812573
No 226
>PRK07041 short chain dehydrogenase; Provisional
Probab=93.50 E-value=0.57 Score=26.39 Aligned_cols=37 Identities=14% Similarity=0.237 Sum_probs=31.0
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989-899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQ-LARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-||++ +|+.++....+.|.+|++.+.+++
T Consensus 5 l~gK~~lITGgs~GIG~aia~~la~~Ga~V~i~~r~~~ 42 (240)
T PRK07041 5 LNDQKVLVVGGSSGIGLAAARAFAARGADVTIASRSRE 42 (240)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 59998999577888999999999987999999959889
No 227
>KOG2380 consensus
Probab=93.48 E-value=0.15 Score=30.22 Aligned_cols=128 Identities=17% Similarity=0.232 Sum_probs=69.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH-HCCCEEEECCCCCHHHHHHHH-HHCCEEEECCCCCCHHHHH
Q ss_conf 78999809898999999998879789999676777134-226827987899999999997-4199999877222113334
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPAN-QVSNQQIAARHDDIKALNTFA-DICDYATYESENIPEKSIS 81 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~-~~ad~~~~~~~~D~~~l~~~~-~~~Dvit~E~E~i~~~~l~ 81 (354)
.+|||||=|-.|+.+++...+-|+.+++.|..+.+.++ .++. +-|++... ++ +.+|+|.+-.|....+
T Consensus 53 l~IaIIGfGnmGqflAetli~aGh~li~hsRsdyssaa~~yg~----~~ft~lhd---lcerhpDvvLlctsilsie--- 122 (480)
T KOG2380 53 LVIAIIGFGNMGQFLAETLIDAGHGLICHSRSDYSSAAEKYGS----AKFTLLHD---LCERHPDVVLLCTSILSIE--- 122 (480)
T ss_pred EEEEEEECCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC----CCCCCHHH---HHHCCCCEEEEEEHHHHHH---
T ss_conf 4899971370889999999864862674475006899997412----33461777---8754899799970254099---
Q ss_pred HHHHCCCCCCCHH----H--HHHHHCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 4430200348767----7--8763152788888765-----0588674321000688886410013125540234675
Q gi|254780158|r 82 YLSTLLPTYPSSR----A--IEISQDRLYEKKFFQE-----SGLTTVDFYEINSQESLTNILGGFKGKGILKTRRLGY 148 (354)
Q Consensus 82 ~l~~~~~v~P~~~----a--l~~~~dK~~~K~~l~~-----~gipt~~~~~v~s~~el~~~~~~~g~P~vlKp~~~Gy 148 (354)
+.+..+|... + .....=|..+|++|.+ .+|-+..-. ...+.. --+.-|.|+|+-..+-||
T Consensus 123 ---kilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlctHpm--fGPksv--nh~wqglpfVydkvRig~ 193 (480)
T KOG2380 123 ---KILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCTHPM--FGPKSV--NHEWQGLPFVYDKVRIGY 193 (480)
T ss_pred ---HHHHHCCCHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEECCC--CCCCCC--CCCCCCCCEEEEEEECCC
T ss_conf ---89985680342021067423431404789999858432666864477--687768--876666865999742143
No 228
>TIGR02152 D_ribokin_bact ribokinase; InterPro: IPR011877 This entry describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family. ; GO: 0004747 ribokinase activity, 0006014 D-ribose metabolic process.
Probab=93.46 E-value=0.64 Score=26.09 Aligned_cols=144 Identities=17% Similarity=0.208 Sum_probs=91.3
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC---HHHC----CCEEEEC--------CCCCHHHHHHHHHHCCEEEE
Q ss_conf 9998098989999999988797899996767771---3422----6827987--------89999999999741999998
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP---ANQV----SNQQIAA--------RHDDIKALNTFADICDYATY 70 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p---a~~~----ad~~~~~--------~~~D~~~l~~~~~~~Dvit~ 70 (354)
||=+|.-.-|.++....++-|+++-.+...++.| |.-+ .+-.|+. +..|.++-.+.++.||+|..
T Consensus 58 ig~VG~D~~G~~~~~~l~~~Gi~t~~v~~~~~~~TG~A~I~V~~~G~N~I~v~~GAN~~l~~~~~~~~~~~i~~s~~~~~ 137 (303)
T TIGR02152 58 IGKVGDDAFGDELLENLKKEGIDTEYVKTVKDTPTGTAFIFVDDTGENRIVVVAGANAELTPEDIDAAEALIAESDIVLL 137 (303)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEE
T ss_conf 98634877899999999874861021167177776358999837888579880275645798899999987746888997
Q ss_pred CCCCCCHHHHHHH----H-HCCCCCCCHHHHHHHHCCHHH--HHHHHHCCCCCCC--------CCCCCHHHHHHHHHHCC
Q ss_conf 7722211333444----3-020034876778763152788--8887650588674--------32100068888641001
Q gi|254780158|r 71 ESENIPEKSISYL----S-TLLPTYPSSRAIEISQDRLYE--KKFFQESGLTTVD--------FYEINSQESLTNILGGF 135 (354)
Q Consensus 71 E~E~i~~~~l~~l----~-~~~~v~P~~~al~~~~dK~~~--K~~l~~~gipt~~--------~~~v~s~~el~~~~~~~ 135 (354)
.+| ||.++.... . .++++.-+|.=. .+... -++|....+=||. -..+++.+++.++++.+
T Consensus 138 QlE-iP~etv~~a~~~a~~~G~~viLNPAPA----~~~~~~m~e~l~~~D~i~PNEtEae~Ltg~~v~~~~~~~~AA~~L 212 (303)
T TIGR02152 138 QLE-IPLETVLEALKIAKKHGVKVILNPAPA----QKKLPKMDELLSLVDIIVPNETEAEILTGIEVTDEEDAEKAAEKL 212 (303)
T ss_pred ECC-CCHHHHHHHHHHHHHCCCCEEECCCCC----CCCCCHHHHHHHHCCEECCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 237-888999999999996589898668888----878754898986424644787999987399878989999999999
Q ss_pred ---CCE-EEEECCCCCCCCCCCCCCCCH
Q ss_conf ---312-554023467555664544674
Q gi|254780158|r 136 ---KGK-GILKTRRLGYDGKGQKVYHEN 159 (354)
Q Consensus 136 ---g~P-~vlKp~~~GydGkG~~~i~~~ 159 (354)
|-- +|+ ++|. ||.+++...
T Consensus 213 ~~~G~~~VIi---TLG~--kGa~~~~~~ 235 (303)
T TIGR02152 213 LEKGVKNVII---TLGS--KGALLVSKD 235 (303)
T ss_pred HHCCCEEEEE---EECC--CEEEEECCC
T ss_conf 8678406988---6547--367998089
No 229
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=93.46 E-value=0.42 Score=27.30 Aligned_cols=84 Identities=20% Similarity=0.243 Sum_probs=37.7
Q ss_pred EHHHCCCCCCCCCCEE--CCCCCCCEEEEECCCCCC-CCCCE--EEEEECCCCCHHHHHHHHHHHHHHHHHCCC-----C
Q ss_conf 0111145644332010--146654139970533454-35550--589852787878999999998867754024-----6
Q gi|254780158|r 175 ILERFTDFNCEISIIA--ARSLNGSICFYDPIQNTH-VNGIL--HKSIVPASISQKTSLLAHSAMRKVLETLDY-----V 244 (354)
Q Consensus 175 iiEe~I~~~~Eisviv--~r~~~G~~~~~p~~en~~-~~gil--~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~-----~ 244 (354)
|-++.|.-=+.=||+| +-+.-|++..-.|-|.+. .||+- -++-.|++++.... +-|+..+.+-|.. -
T Consensus 267 It~emV~~MKpGSVIVDlAadqGGN~E~T~pge~~~~~~GV~iiG~~nlps~~~~~aS---~lya~Ni~~~l~~~~~~~~ 343 (510)
T PRK09424 267 ITKEMVDSMKPGSVIVDLAAANGGNCELTVPGEVVVTDNGVKIIGYTDLPSRLPTQSS---QLYGTNLVNLLKLLCKEKD 343 (510)
T ss_pred CCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEECCCCHHCCCHHHHH---HHHHHHHHHHHHHHCCCCC
T ss_conf 3799995269997899952557997106639948994199699888851103778999---9999999999998555637
Q ss_pred CCCCCEE--------EECCCCEEEE
Q ss_conf 7753104--------5538840899
Q gi|254780158|r 245 GILCIEF--------FVTNDGNVIA 261 (354)
Q Consensus 245 Gv~~VEf--------fv~~dg~i~v 261 (354)
|-|.++| -++.||++..
T Consensus 344 ~~~~~d~~deii~~~~v~~~g~~~w 368 (510)
T PRK09424 344 GNIVVDFDDVVIRGVTVVRDGEITW 368 (510)
T ss_pred CEEECCCCCHHHCCEEEEECCEEEC
T ss_conf 8073588564222406830896825
No 230
>PRK06185 hypothetical protein; Provisional
Probab=93.45 E-value=0.16 Score=30.21 Aligned_cols=37 Identities=30% Similarity=0.502 Sum_probs=32.1
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887-899980989899999999887978999967677
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|.++ .|.|+|+|--|.+++....+.|++|.+++..++
T Consensus 3 ~~~~tDV~IVGaGpaGL~lAl~Lar~Gi~V~VlEk~~~ 40 (409)
T PRK06185 3 MVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHAD 40 (409)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 88789989999188999999999977999999918999
No 231
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=93.43 E-value=0.36 Score=27.78 Aligned_cols=66 Identities=14% Similarity=0.052 Sum_probs=43.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 789998098989999999988797--899996767771342268279878999999999974199999877
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYES 72 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~ 72 (354)
++|.|+|-|-.|-=++.+.++.|. +++.+|.+++.-........+..-+ +.+.+..+.+|+|.+-.
T Consensus 7 ~~I~IiGlGLIGgSlA~alk~~~~~~~I~g~d~~~~~l~~A~~~g~id~~~---~~~~e~~~~~DlIilat 74 (307)
T PRK07502 7 DRVALIGLGLIGSSLARAIRRQGLAGEIVGAARSAETRARARELGLGDRVT---TSAAEAVKGADLVILCV 74 (307)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCHHC---CCHHHHHCCCCEEEEEC
T ss_conf 668999278799999999985499857999849999999999869975112---77766404589799917
No 232
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=93.42 E-value=0.63 Score=26.14 Aligned_cols=193 Identities=18% Similarity=0.179 Sum_probs=101.7
Q ss_pred CCCCCCCHHHHHHHHCCHHHHHH-HHHCCCCCCC-CCCCCHHHHHHHHHHCCCCEEEEECCCCCC-CCCCCCCCCCHHHH
Q ss_conf 20034876778763152788888-7650588674-321000688886410013125540234675-55664544674677
Q gi|254780158|r 86 LLPTYPSSRAIEISQDRLYEKKF-FQESGLTTVD-FYEINSQESLTNILGGFKGKGILKTRRLGY-DGKGQKVYHENDCT 162 (354)
Q Consensus 86 ~~~v~P~~~al~~~~dK~~~K~~-l~~~gipt~~-~~~v~s~~el~~~~~~~g~P~vlKp~~~Gy-dGkG~~~i~~~~~l 162 (354)
...+.|-+.++.-.|+.+.++.- ..+.+|.--- -...-.++||-+.+.+++.|. ..|| ||||- ++.++.
T Consensus 50 ~~~F~pl~~v~~~v~~~L~f~~~~~~kitISgGGD~ScYP~l~eL~~~l~~~~lpi-----HLGYTSGKGf---d~~~~a 121 (404)
T TIGR03278 50 NGDFIPPQVVLGEVQTSLGFRTGRDTKVTISGGGDVSCYPELEELTKGLSDLGLPI-----HLGYTSGKGF---DDPEIA 121 (404)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCE-----EECCCCCCCC---CCHHHH
T ss_conf 48976979999999986345677722899807988441631999999998669835-----7412378898---987999
Q ss_pred HHHHHH---------CCCCCEEHHHCCC-CCCCCCCEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 898751---------3555010111145-644332010146654139970533454355505898527878789999999
Q gi|254780158|r 163 QNLYAS---------LGNVPLILERFTD-FNCEISIIAARSLNGSICFYDPIQNTHVNGILHKSIVPASISQKTSLLAHS 232 (354)
Q Consensus 163 ~~~~~~---------~~~~~~iiEe~I~-~~~Eisviv~r~~~G~~~~~p~~en~~~~gil~~s~~Pa~i~~~~~~~a~~ 232 (354)
+...+. +...+-+=+||+. -.-|.|+-+.|...+.+.+|. ...+.|.-=+-++..+-
T Consensus 122 ~~li~~Gv~EVtfTVFatDp~LR~ewM~D~~pE~SL~~L~~fc~~cev~~-----------A~ViiPGVNDGevL~kT-- 188 (404)
T TIGR03278 122 EFLIDNGVREVSFTVFATDPELRREWMKDPTPEASLQCLRRFCESCEVHA-----------ASVIIPGVNDGDVLWKT-- 188 (404)
T ss_pred HHHHHCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEE-----------EEEEECCCCCHHHHHHH--
T ss_conf 99996797379999860898999987169986889999999984411137-----------89980686856999999--
Q ss_pred HHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHH--------HHCCCCCCCHHCCC
Q ss_conf 9886775402467753104553884089994125704560462100135889999999--------81889997000485
Q gi|254780158|r 233 AMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRS--------ITNLPLGNPNRHSN 304 (354)
Q Consensus 233 ~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~ra--------i~glpl~~~~~~~~ 304 (354)
-.-++.+|-.|+.-+-|-=+.+..|++ +=||=..+ +.-.+++.|++.+|- |+|-||.+|..-+|
T Consensus 189 --~~~Le~wGakg~ILMRFAN~~eqGLIL-~N~Pii~g-----i~~htv~EF~~lV~e~~~~~~~RitGTPl~DP~~gsP 260 (404)
T TIGR03278 189 --CADLESWGAKALILMRFANTEEQGLIL-GNAPIIPG-----IKPHTVSEFKNIVRETHKEFPIRVTGTPLCDPETGAP 260 (404)
T ss_pred --HHHHHHHCCCEEEEEEECCCCCCCEEE-CCCCCCCC-----CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
T ss_conf --999998387568987405774441355-68767688-----7767789999999999986393452671678778996
Q ss_pred EEE
Q ss_conf 679
Q gi|254780158|r 305 CVM 307 (354)
Q Consensus 305 ~~m 307 (354)
-+.
T Consensus 261 FAi 263 (404)
T TIGR03278 261 FAL 263 (404)
T ss_pred CEE
T ss_conf 133
No 233
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=93.41 E-value=0.19 Score=29.65 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=28.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCC
Q ss_conf 8999809898999999998879--7899996767771
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLG--FCTVILDPDSNCP 39 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG--~~v~v~d~~~~~p 39 (354)
||.|||||-=|.-.+..+++++ .++++++.++..+
T Consensus 2 kvVIIG~G~AG~saA~~l~~~~~~~~I~v~e~~~~~~ 38 (443)
T PRK09564 2 KIIIIGGTAAGTSAAAKAKRLNKELEIVVYEKTDIIS 38 (443)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf 6999996099999999998149399999994889877
No 234
>pfam00743 FMO-like Flavin-binding monooxygenase-like. This family includes FMO proteins and cyclohexanone monooxygenase.
Probab=93.40 E-value=0.18 Score=29.85 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=31.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 878999809898999999998879789999676777
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
.|||.|||+|..|.-.+.++.+-|+++++++.+++-
T Consensus 1 ~KrVAIIGAG~SGL~a~K~lle~G~~~~~FE~~~~i 36 (532)
T pfam00743 1 AKKVAVIGAGVSGLSSIKCCLEEGLEPTCFERSDDI 36 (532)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 987999897299999999998779982999779997
No 235
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.37 E-value=0.25 Score=28.86 Aligned_cols=68 Identities=16% Similarity=0.202 Sum_probs=49.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
+.+++++||.|..|.-.+....+-|+.-+.+..-.-..|..+|.++- +.+...+.+..+...+|+|..
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-~~~~~l~el~~~l~~~DvVis 244 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-AEAVALEELLEALAEADVVIS 244 (414)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHC-CEEECHHHHHHHHHHCCEEEE
T ss_conf 46769998651899999999985898779997587899999999838-702218778876520799999
No 236
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=93.37 E-value=0.17 Score=29.88 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=31.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEECCCC
Q ss_conf 9887899980989899999999887978-999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFC-TVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~-v~v~d~~~~ 37 (354)
|++.++.|||+||-|..++.+.+++|+. +++++.+.+
T Consensus 6 ~~~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~ 43 (443)
T COG2072 6 ATHTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDD 43 (443)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 67554899898788999999999759986799970576
No 237
>PRK06953 short chain dehydrogenase; Provisional
Probab=93.37 E-value=0.42 Score=27.29 Aligned_cols=62 Identities=15% Similarity=0.137 Sum_probs=44.7
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH--HHCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 789998098-9899999999887978999967677713--4226827987899999999997419
Q gi|254780158|r 4 KTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA--NQVSNQQIAARHDDIKALNTFADIC 65 (354)
Q Consensus 4 k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa--~~~ad~~~~~~~~D~~~l~~~~~~~ 65 (354)
|++.|-|+. -+|+.+++...+.|++|++.+.++.... .....+.+..|..|.+.+..+++..
T Consensus 2 K~~LVTGas~GIG~a~a~~la~~G~~V~~~~R~~~~l~~l~~~~~~~~~~Dv~d~~~v~~~~~~~ 66 (222)
T PRK06953 2 KTVLIVGASRGIGLEFVRQYRADGWRVIATARDAAGLAALRALGAEALALDVADPESIAGLGWKL 66 (222)
T ss_pred CEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
T ss_conf 99999475729999999999988899999968888899988421517774058999999999862
No 238
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=93.36 E-value=0.19 Score=29.59 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=31.8
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9887-89998098989999999988797899996767
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|.|+ -|.|+|+|-.|.+++.+..+.|++|.+++...
T Consensus 1 M~~~~DV~IvGaGp~Gl~lA~~La~~G~~v~viE~~~ 37 (405)
T PRK08850 1 MMQSVDVAIIGGGMVGLALAAALKDSDLRIAVIEGQL 37 (405)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 9998768999915899999999985899789993799
No 239
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.30 E-value=0.51 Score=26.76 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=31.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 988789998098-98999999998879789999676777
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
++.|++.|-||+ -+|+.++.+..+.|++|++.+.+.+.
T Consensus 3 L~gK~~lITGgs~GIG~aia~~la~~G~~Vii~~~~~~~ 41 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVLNYASSEA 41 (248)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHH
T ss_conf 799889994897689999999999879989999698565
No 240
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=93.30 E-value=0.57 Score=26.39 Aligned_cols=61 Identities=28% Similarity=0.315 Sum_probs=40.2
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC---------EEEECCCCCHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771342268---------27987899999999997
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSN---------QQIAARHDDIKALNTFA 62 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad---------~~~~~~~~D~~~l~~~~ 62 (354)
++.|++.|-|++ -+|+.++++..+.|.+|+++|.+.+.- .+.++ ..+.+|..|.+.+.++.
T Consensus 8 L~gKvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~-~~~~~~l~~~g~~~~~~~~Dvtd~~~v~~~~ 78 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKA-EAVVEEIKANGGEAIALKADVLDKESLEQAR 78 (278)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
T ss_conf 8999899958674899999999998799899997988999-9999999845990999982489999999999
No 241
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.27 E-value=0.22 Score=29.14 Aligned_cols=65 Identities=20% Similarity=0.266 Sum_probs=39.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC----EEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 988789998098989999999988797----8999967677713422682798789999999999741999998
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGF----CTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~----~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
|+| ||+||+|..|..++....+-|. ++++.++++..-...+.+.+-.....|.+ +++..||+|..
T Consensus 1 M~k--I~fIG~GnMg~Aii~Gll~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~dvIil 69 (275)
T PRK06928 1 MEK--IGFIGYGSMADMIATKLLETEVITPEEIILYSRSENEHFKQLYDKYPTVALASNE---ELFTKCDHSFI 69 (275)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEECCHH---HHHHHCCEEEE
T ss_conf 988--9998678999999999997899996369997899389999999874953637779---99854998999
No 242
>KOG0069 consensus
Probab=93.27 E-value=0.23 Score=29.07 Aligned_cols=31 Identities=13% Similarity=0.033 Sum_probs=18.3
Q ss_pred CEEEEHHHCCCCHHHHHHHHHHCCCCCCCHH
Q ss_conf 6046210013588999999981889997000
Q gi|254780158|r 271 SGHWTEASCVISQFEQHIRSITNLPLGNPNR 301 (354)
Q Consensus 271 sgh~t~~~~~~sqfe~h~rai~glpl~~~~~ 301 (354)
+-.+|.+.+..---.+..+...|.|+..+..
T Consensus 305 ~t~~t~~~m~~~v~~n~~~~~~g~~~~~~~~ 335 (336)
T KOG0069 305 ATLETREKMAEIVLNNLLAFFSGKPLLTPVL 335 (336)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 7499999999999999998872688778677
No 243
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=93.23 E-value=0.22 Score=29.25 Aligned_cols=61 Identities=15% Similarity=0.116 Sum_probs=44.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 8999809-8989999999988797899996767771342268279878999999999974199
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICD 66 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~D 66 (354)
||+|.|+ |++|+.++....+.|+.|.+...++.. +.....+....++.|.+.+......+|
T Consensus 1 TIlVtGATG~iG~~v~~~L~~~g~~v~~~~R~~~~-~~~~~~~~v~~d~~d~~~~~~a~~~~d 62 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSS-SAGPNEKHVKFDWLDEDTWDNPFSSDD 62 (285)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHH-CCCCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 98999899818999999998689978999588566-466667536864448114888976353
No 244
>PRK06545 prephenate dehydrogenase; Validated
Probab=93.23 E-value=0.19 Score=29.63 Aligned_cols=161 Identities=16% Similarity=0.083 Sum_probs=75.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHH-HH
Q ss_conf 78999809898999999998879789999676777134226827987899999999997419999987722211333-44
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEKSI-SY 82 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l-~~ 82 (354)
|+|.|+|-|-.|-=++.|.++.|..+.+++.+.+.-....|...-..+-. ...+.+..+.+|.|.+-. |.... ..
T Consensus 1 k~V~IiGlGLIGgSlalalk~~g~~~~i~~~d~~~~~l~~A~~~g~id~~-~~~~~~~~~~~DlVvlat---Pv~~~~~~ 76 (357)
T PRK06545 1 KTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSGAQLARALGFGVIDEL-AEDLARAAAEADLIVLAV---PVDATAAL 76 (357)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEE-CCCHHHHCCCCCEEEECC---CHHHHHHH
T ss_conf 97999977878999999998549976999966999999999868997730-488767156799999949---99999999
Q ss_pred HHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC----CHH-HHHHHHHHC--CCCEEEEECCCCCCCCCCCCC
Q ss_conf 4302003487677876315278888876505886743210----006-888864100--131255402346755566454
Q gi|254780158|r 83 LSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYEI----NSQ-ESLTNILGG--FKGKGILKTRRLGYDGKGQKV 155 (354)
Q Consensus 83 l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~v----~s~-~el~~~~~~--~g~P~vlKp~~~GydGkG~~~ 155 (354)
+.+...+.|+.-....+.=|..--+.+++++.....|.-- -+. .....+-.. -|-++|+-|.... +
T Consensus 77 l~~l~~l~~~~ivTDVgSvK~~I~~~~~~~~~~~~~FVggHPMAGsEksG~~aA~~~LF~~a~~iltP~~~t-~------ 149 (357)
T PRK06545 77 LAELADLAPGVIVTDVGSVKGAILAEAEALGLKDVRFVGGHPMAGSHKSGVLAAKAHLFENAPWVLTPDDHV-D------ 149 (357)
T ss_pred HHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHCCHHHHCCCEEEEECCCCC-C------
T ss_conf 999872389978997510079999999983688886456798264777471226456866981999638999-9------
Q ss_pred CCCHHHHHHHHHHCCCCCEE
Q ss_conf 46746778987513555010
Q gi|254780158|r 156 YHENDCTQNLYASLGNVPLI 175 (354)
Q Consensus 156 i~~~~~l~~~~~~~~~~~~i 175 (354)
-...+.++.+|..++...+.
T Consensus 150 ~~~~~~v~~l~~~lGa~~~~ 169 (357)
T PRK06545 150 PEAVAELKDLLSGTGAKFVV 169 (357)
T ss_pred HHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999999975998998
No 245
>PRK08226 short chain dehydrogenase; Provisional
Probab=93.21 E-value=0.54 Score=26.55 Aligned_cols=61 Identities=18% Similarity=0.212 Sum_probs=40.1
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC---------EEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771342268---------279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSN---------QQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad---------~~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-|++ -+|+..++...+.|.+|++.|.+++ +.+.++ ..+.+|..|.+.+.++.+
T Consensus 4 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vvi~d~~~~--~~~~~~~~~~~g~~~~~~~~Dvsd~~~v~~~v~ 74 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE--IEKLADELCGRGHRCTAVVADVRDPASVAAAIK 74 (263)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH--HHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 89988999473779999999999987998999969879--999999998369917999941799999999999
No 246
>pfam01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family. The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones.
Probab=93.20 E-value=0.71 Score=25.79 Aligned_cols=62 Identities=19% Similarity=0.127 Sum_probs=46.1
Q ss_pred EEC-CCHHHHHHHHHHHHCC--CEEEEEECCCCCCHH-HC----CCEEEECCCCCHHHHHHHHHHCCEEE
Q ss_conf 980-9898999999998879--789999676777134-22----68279878999999999974199999
Q gi|254780158|r 8 IIG-GGQLARMLSMSAARLG--FCTVILDPDSNCPAN-QV----SNQQIAARHDDIKALNTFADICDYAT 69 (354)
Q Consensus 8 IlG-~GqL~rml~~aA~~lG--~~v~v~d~~~~~pa~-~~----ad~~~~~~~~D~~~l~~~~~~~Dvit 69 (354)
|-| +|-+|+.++.+..+.| ++|.++|........ .. ...++.+|..|.+.+.+..+.||+|.
T Consensus 2 VTGg~GFIGs~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~~~~~~~~~~v~gDl~d~~~l~~~~~~~D~V~ 71 (280)
T pfam01073 2 VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDLRRALQGSDVVI 71 (280)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCEEE
T ss_conf 0586759999999999977997579998788986788873225887599912899999999984799899
No 247
>PRK06125 short chain dehydrogenase; Provisional
Probab=93.19 E-value=0.65 Score=26.03 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=30.5
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.+++...+-|.+|++++.+.+
T Consensus 5 l~gK~alITG~s~GIG~aiA~~la~~Ga~V~i~~r~~~ 42 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLVLAARDAD 42 (259)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 69998999687768999999999987998999979889
No 248
>PRK12742 oxidoreductase; Provisional
Probab=93.17 E-value=0.65 Score=26.05 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=27.2
Q ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEE
Q ss_conf 887899980989-89999999988797899996
Q gi|254780158|r 2 KKKTIGIIGGGQ-LARMLSMSAARLGFCTVILD 33 (354)
Q Consensus 2 ~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~d 33 (354)
+.|++.|.|+++ +|+.+++...+.|++|++..
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~ 37 (237)
T PRK12742 5 TGKSVLVLGGSRGIGAAIVRRFVTDGANVVFTY 37 (237)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEC
T ss_conf 999899927887999999999998799999977
No 249
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=93.16 E-value=0.15 Score=30.34 Aligned_cols=105 Identities=13% Similarity=0.150 Sum_probs=56.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECC------CCC
Q ss_conf 88789998098989999999988797899996767771342268279878999999999974199999877------222
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYES------ENI 75 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~------E~i 75 (354)
+.++|.||||.+-...++....++|++|.++.-+....+ +. .... .+.+.+..+.+|+|..-. +.|
T Consensus 1 ~g~~iaviGGD~Rq~~l~~~L~~~g~~V~~~gf~~~~~~--~~-~~~~-----~~~~~~~~~~~d~iIlPvpg~~d~g~i 72 (296)
T PRK08306 1 TGMHIAVIGGDARQLELIRKLVELGAKVSLVGFDQLDHG--FT-GVAK-----CSSLEEALSDVDVIILPVPGTNDEGEV 72 (296)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC--CC-CEEE-----ECCHHHHHHCCCEEEECCCCCCCCCEE
T ss_conf 994899978758999999999977997999835765556--67-6177-----346788872399999788322589638
Q ss_pred CH-----------HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 11-----------33344430200348767787631527888887650588674321
Q gi|254780158|r 76 PE-----------KSISYLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTVDFYE 121 (354)
Q Consensus 76 ~~-----------~~l~~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~~~~~ 121 (354)
.. +.++.+..+..++-+ .-+-..|++.++.|++.-.|..
T Consensus 73 ~~~~~~~~~~l~~~~~~~l~~~~~vf~G-------~~~~~l~~~~~~~~~~~~d~~e 122 (296)
T PRK08306 73 DTVFSNEKLVLTKELLEKTPEHCTIFSG-------IANPYLKELAETTGRKLIELFE 122 (296)
T ss_pred ECCCCCCCCCHHHHHHHHCCCCCEEEEE-------CCCHHHHHHHHHCCCCEEEEEC
T ss_conf 5534678763229999746999879995-------5998999999975983676200
No 250
>KOG0409 consensus
Probab=93.14 E-value=0.12 Score=31.05 Aligned_cols=64 Identities=17% Similarity=0.260 Sum_probs=43.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
++++||.||=|-.|.-|+.-..+.||.|+|+|.+.+. +..+.+ .--.-.+.=.++++.||++..
T Consensus 34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k-~~~f~~----~Ga~v~~sPaeVae~sDvvit 97 (327)
T KOG0409 34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDK-CKEFQE----AGARVANSPAEVAEDSDVVIT 97 (327)
T ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCEEEEEECCHHH-HHHHHH----HCHHHHCCHHHHHHHCCEEEE
T ss_conf 6551357743411189999999759879999586788-789997----050140797999863688999
No 251
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.10 E-value=0.28 Score=28.53 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=32.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 88789998098989999999988797899996767771
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
.+|+|+|+|-|..|+-++..+.+.|.+|.+.|..+.++
T Consensus 6 ~~k~vlV~GlG~sG~a~a~~L~~~G~~V~~~D~~~~~~ 43 (501)
T PRK02006 6 QRPMVLVLGLGESGLAMARWCARHGCRLRVADTREAPP 43 (501)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 89839998336889999999997898499998999986
No 252
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.32 Score=28.13 Aligned_cols=31 Identities=16% Similarity=0.363 Sum_probs=25.8
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEE
Q ss_conf 88789998098-98999999998879789999
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVIL 32 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~ 32 (354)
++|++.|-|++ -+|+.+++...+.|++|++.
T Consensus 8 ~~KvalVTGas~GIG~aiA~~la~~Ga~V~i~ 39 (256)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVH 39 (256)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 99979994886789999999999879989998
No 253
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=93.06 E-value=0.36 Score=27.79 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=32.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCCCHHH
Q ss_conf 9887899980989899999999887978999967--67771342
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDP--DSNCPANQ 42 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~--~~~~pa~~ 42 (354)
|-.++|-|||||-=|.+-|.++.|+|++|..+.- ....|+++
T Consensus 1 ~m~~~ViVIGgGhAG~EAA~a~Ar~G~~v~L~emrp~~~tpah~ 44 (434)
T PRK05335 1 MMMKPVNVIGAGLAGSEAAWQLAKRGVPVELYEMRPVKKTPAHH 44 (434)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf 99885699898689999999999689967999933566777624
No 254
>PRK07814 short chain dehydrogenase; Provisional
Probab=93.06 E-value=0.35 Score=27.86 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=40.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC---------CEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134226---------8279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVS---------NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~a---------d~~~~~~~~D~~~l~~~~~ 63 (354)
|+.|++.|-||+ -+|+.++++..+.|.+|++.+.+.+.. .+.+ ...+.+|..|.+.+.++.+
T Consensus 8 L~gKvalITGgs~GIG~aia~~la~~Ga~V~i~~~~~~~l-~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~v~ 79 (263)
T PRK07814 8 LDGQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL-DEVAEQIRAAGRRAHVVAADLAHPEATAGLAG 79 (263)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 9999899958966899999999998799899996989999-99999998529928999815899999999999
No 255
>PRK07045 putative monooxygenase; Reviewed
Probab=93.05 E-value=0.22 Score=29.18 Aligned_cols=41 Identities=20% Similarity=0.248 Sum_probs=33.8
Q ss_pred CCCC--EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH
Q ss_conf 9887--8999809898999999998879789999676777134
Q gi|254780158|r 1 MKKK--TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPAN 41 (354)
Q Consensus 1 M~~k--~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~ 41 (354)
|+.. .|.|+|+|--|..++.+.++.|++|.+++..+.....
T Consensus 1 m~~~~~dVlIvGaG~aGl~lA~~L~r~G~~v~v~E~~~~~~~~ 43 (388)
T PRK07045 1 MKNNPVDVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQ 43 (388)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 9989985899992889999999998679989999089987777
No 256
>PTZ00117 malate dehydrogenase; Provisional
Probab=93.03 E-value=0.48 Score=26.91 Aligned_cols=110 Identities=10% Similarity=0.083 Sum_probs=55.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHHCCCEEEE----------CCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 789998098989999999988797-8999967677713422682798----------78999999999974199999877
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSNCPANQVSNQQIA----------ARHDDIKALNTFADICDYATYES 72 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~~pa~~~ad~~~~----------~~~~D~~~l~~~~~~~Dvit~E~ 72 (354)
++|+|||+|..|.-++.++...|+ +++.+|-+++-+..+..|-... ....|.+ -++.||+|...-
T Consensus 2 ~KV~IIGaG~VG~~~A~~l~~~~~~eivLiDi~~~~a~g~a~Dl~h~~~~~~~~~~i~~~~dy~----~~~daDiVVitA 77 (313)
T PTZ00117 2 KKISIIGSGQIGAIVGLLLLQENLGDVYLYDVIEGVPQGKALDLKHFSTIIGVNANILGTNNYE----DIKDSDVIVITA 77 (313)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHH----HHCCCCEEEECC
T ss_conf 7899989798999999999708998799995889830889988772420368985798379999----968999999898
Q ss_pred CCCCHHHHHHHHHCCCCCCCHHHHHH-HHCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHH
Q ss_conf 22211333444302003487677876-31527888887650588--674321000688886
Q gi|254780158|r 73 ENIPEKSISYLSTLLPTYPSSRAIEI-SQDRLYEKKFFQESGLT--TVDFYEINSQESLTN 130 (354)
Q Consensus 73 E~i~~~~l~~l~~~~~v~P~~~al~~-~~dK~~~K~~l~~~gip--t~~~~~v~s~~el~~ 130 (354)
. .+--|+..-... ..|-...|++..+..-- -+-+..++|+-|+..
T Consensus 78 G-------------~~rk~g~tR~dLl~~N~~I~~~i~~~i~~~~p~aiiivvtNPvDimt 125 (313)
T PTZ00117 78 G-------------VQRKEGMTREDLIGVNGKIMKSVAESVKKHCPNAFVICVSNPLDIMV 125 (313)
T ss_pred C-------------CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
T ss_conf 9-------------98997998899998767778888877623589808997899489999
No 257
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.01 E-value=0.39 Score=27.53 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=31.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8878999809898999999998879789999676777
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
..|||+|+|-|..|+-.+..+.+.|++|.++|.++..
T Consensus 8 ~gk~v~v~GlG~sG~s~a~~L~~~G~~V~~~D~~~~~ 44 (457)
T PRK01390 8 KGKTVALFGLGGSGLATARALKAGGAEVIAWDDNPDS 44 (457)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCHH
T ss_conf 8998999943699999999999789979999399206
No 258
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=92.99 E-value=0.25 Score=28.81 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=37.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC----EEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 988789998098989999999988797----8999967677713422682798789999999999741999998
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGF----CTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~----~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
|+| |||+||+|.+|..++....+-|+ ++++.|++... ..+..+++-+--..|.+ +.++.+|+|..
T Consensus 1 M~k-kI~fIG~GnMg~Aii~Gl~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~---e~~~~~Dii~L 69 (272)
T PRK12491 1 MNK-QIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSN-LKNASDKYGITITTNNN---EVANSADILIL 69 (272)
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHH-HHHHHHHCCCEEECCHH---HHHHHCCEEEE
T ss_conf 998-69998567999999999997889896769996979999-99999971978866879---99731999999
No 259
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional
Probab=92.99 E-value=0.51 Score=26.74 Aligned_cols=74 Identities=22% Similarity=0.159 Sum_probs=45.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH--HCCC-EEEECCC--CCHHHHHHHH-HHCCEEEE--CCC
Q ss_conf 8878999809898999999998879789999676777134--2268-2798789--9999999997-41999998--772
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPAN--QVSN-QQIAARH--DDIKALNTFA-DICDYATY--ESE 73 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~--~~ad-~~~~~~~--~D~~~l~~~~-~~~Dvit~--E~E 73 (354)
..++|+=+|+| |-.++++..++|.+|..+|++++.... .-|. .....+| .+.+.+.... ++-|+|+. -+|
T Consensus 48 ~G~~ILDVGCG--gG~lse~LAr~Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~~~e~l~~~~~~~FDvV~~~EVlE 125 (233)
T PRK05134 48 FGKRVLDVGCG--GGILSESMARLGATVTGIDASEENIEVARLHALESGLKIDYRQITAEELAAEHPGQFDVVTCMEMLE 125 (233)
T ss_pred CCCEEEEECCC--CCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEEEEEEHHHH
T ss_conf 89989997558--9711289996799799987998999999998564434511675147665430578634774421477
Q ss_pred CCCH
Q ss_conf 2211
Q gi|254780158|r 74 NIPE 77 (354)
Q Consensus 74 ~i~~ 77 (354)
||+.
T Consensus 126 HV~d 129 (233)
T PRK05134 126 HVPD 129 (233)
T ss_pred HCCC
T ss_conf 5389
No 260
>PRK06126 hypothetical protein; Provisional
Probab=92.97 E-value=0.18 Score=29.72 Aligned_cols=38 Identities=21% Similarity=0.494 Sum_probs=32.9
Q ss_pred CCCC---EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 9887---8999809898999999998879789999676777
Q gi|254780158|r 1 MKKK---TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k---~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|++. -|.|+|+|--|.|++....+.|++|.++|..+..
T Consensus 2 m~~~~~~DVlIVGaGPvGL~lA~~La~~Gi~v~viEr~~~~ 42 (545)
T PRK06126 2 MENTSETPVLIVGGGPVGLALALELGRRGVDSILVERGDGT 42 (545)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 99988899899994989999999999879999998899998
No 261
>PRK08219 short chain dehydrogenase; Provisional
Probab=92.95 E-value=0.79 Score=25.46 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=41.6
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCC---HHHCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771---3422682798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCP---ANQVSNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~p---a~~~ad~~~~~~~~D~~~l~~~~~~ 64 (354)
|+.|++.|-|++ -+|+.++....+-| .+++.+.+.+.. +.......+..|..|.+.+.++.+.
T Consensus 1 m~mKvalITGas~GIG~aia~~la~~g-~vv~~~r~~~~l~~l~~~~~~~~~~~Dlt~~~~i~~~~~~ 67 (226)
T PRK08219 1 MGMPTALITGASRGIGAAIARALARTH-TLLLAGRPSERLDAVAARLGATTWPADLTDPEAIAAAVEP 67 (226)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
T ss_conf 978999992846499999999999699-8999989889999999970993786057999999999996
No 262
>pfam03435 Saccharop_dh Saccharopine dehydrogenase. This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase.
Probab=92.94 E-value=0.56 Score=26.49 Aligned_cols=82 Identities=18% Similarity=0.135 Sum_probs=52.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCHHHCC-----C--EEEECCCCCHHHHHHHHHHCCEEEECCC-CC
Q ss_conf 9998098989999999988797--89999676777134226-----8--2798789999999999741999998772-22
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPANQVS-----N--QQIAARHDDIKALNTFADICDYATYESE-NI 75 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa~~~a-----d--~~~~~~~~D~~~l~~~~~~~Dvit~E~E-~i 75 (354)
|+|||+|..|+-++..+.+-+- ++.+.|.+.+.. .+++ . .....+..|.+++.++.+.+|+|+--.. ..
T Consensus 1 IlvlGaG~vG~~~~~~L~~~~~~~~i~vad~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~diVv~~~p~~~ 79 (384)
T pfam03435 1 VLIIGAGGVGQGVAPLLARHGDVDEITVADRSLEKA-QALAAPKLGLRFIAIAVDADNYEALAALLKEGDLVINLAPPFL 79 (384)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHH-HHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCHHH
T ss_conf 989897787999999997289988699998988998-9877523698538999577899999998712899999984341
Q ss_pred CHHHHHHH-HHCCC
Q ss_conf 11333444-30200
Q gi|254780158|r 76 PEKSISYL-STLLP 88 (354)
Q Consensus 76 ~~~~l~~l-~~~~~ 88 (354)
....++.+ +.++.
T Consensus 80 ~~~i~~~c~~~g~~ 93 (384)
T pfam03435 80 SLTVLKACIETGVH 93 (384)
T ss_pred CHHHHHHHHHCCCC
T ss_conf 69999999973997
No 263
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.94 E-value=0.45 Score=27.08 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=30.6
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-||+ -+|+.++++..+.|++|++.+.+.+
T Consensus 4 l~gK~alITGgs~GIG~aia~~la~~G~~V~i~~r~~~ 41 (250)
T PRK07231 4 LEGKVAIVTGAGSGFGEGIARRFAAEGARVVVTDRNQE 41 (250)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 69988999388868999999999987999999979889
No 264
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=92.92 E-value=0.15 Score=30.29 Aligned_cols=75 Identities=15% Similarity=0.141 Sum_probs=46.4
Q ss_pred ECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEHH-H-CCCCHHHHHHHHHHCC
Q ss_conf 5278-78789999999988677540246775310455388408999412570456046210-0-1358899999998188
Q gi|254780158|r 218 VPAS-ISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHWTEA-S-CVISQFEQHIRSITNL 294 (354)
Q Consensus 218 ~Pa~-i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~-~-~~~sqfe~h~rai~gl 294 (354)
.|.. .+++..+.+.++++++.+. + +..- +.. .+++|.+.-+--|..+|.++ + ++..+-+.-+|.-+|+
T Consensus 154 I~g~~T~~e~~~~~~~~~~~igK~---~-vv~~----D~p-GFi~NRil~~~~~eA~~l~~eGva~~e~ID~~~~~~~G~ 224 (307)
T COG1250 154 IRGEKTSDETVERVVEFAKKIGKT---P-VVVK----DVP-GFIVNRLLAALLNEAIRLLEEGVATPEEIDAAMRQGLGL 224 (307)
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCC---C-EEEC----CCC-CEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf 168878999999999999985998---8-7426----788-612577789999999999980899999999999863699
Q ss_pred CCCCCHH
Q ss_conf 9997000
Q gi|254780158|r 295 PLGNPNR 301 (354)
Q Consensus 295 pl~~~~~ 301 (354)
|.|.-.+
T Consensus 225 pmGpf~l 231 (307)
T COG1250 225 PMGPFEL 231 (307)
T ss_pred CCCHHHH
T ss_conf 7658888
No 265
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=92.92 E-value=0.35 Score=27.86 Aligned_cols=120 Identities=13% Similarity=0.075 Sum_probs=60.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEE-EECCCCCCHH---HCCCEEEECCCCCHHHHHHHHHHCCEEEE--CCCC
Q ss_conf 8789998098989999999988--7978999-9676777134---22682798789999999999741999998--7722
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAAR--LGFCTVI-LDPDSNCPAN---QVSNQQIAARHDDIKALNTFADICDYATY--ESEN 74 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~--lG~~v~v-~d~~~~~pa~---~~ad~~~~~~~~D~~~l~~~~~~~Dvit~--E~E~ 74 (354)
|-||||||.|-+|+.++.+..+ -|+++.. +++++..... .+.... ...+ +.++.+++|+|.= -.+.
T Consensus 6 kmrVgliG~GaIG~~va~~l~~g~~~~~l~~V~~r~~~~~~~~~~~~~~~~---~~~~---~~~l~~~~DlVVE~A~~~a 79 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPP---PVVP---LDQLATHADIVVEAAPASV 79 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCC---CCCC---HHHHHHCCCEEEECCCHHH
T ss_conf 677999886789999999997589981899999288788899987358987---4078---8996018999998989899
Q ss_pred CCHHHHHHHHHCCCCC-CCHHHHHHHHCCHHHHHHHHHCCCC-CCCCCCCCHHHHHHHH
Q ss_conf 2113334443020034-8767787631527888887650588-6743210006888864
Q gi|254780158|r 75 IPEKSISYLSTLLPTY-PSSRAIEISQDRLYEKKFFQESGLT-TVDFYEINSQESLTNI 131 (354)
Q Consensus 75 i~~~~l~~l~~~~~v~-P~~~al~~~~dK~~~K~~l~~~gip-t~~~~~v~s~~el~~~ 131 (354)
+.......|+.+..+. -|.-++. |.....+..++.|-. ..|...+-.+|.+..+
T Consensus 80 v~~~~~~~L~~G~dlvv~SvGALa---d~~~l~~~A~~~g~~i~ipsGAigGlD~l~aa 135 (271)
T PRK13302 80 LRAIVEPVLAAGKKAIVLSVGALL---RNEDLIDLARQNGGQIIVPTGALLGLDAVTAA 135 (271)
T ss_pred HHHHHHHHHHCCCCEEEECHHHHC---CCHHHHHHHHHCCCEEEEECCHHHHHHHHHHH
T ss_conf 999999999759978997557956---92999999996698599807034347899998
No 266
>PRK06057 short chain dehydrogenase; Provisional
Probab=92.89 E-value=0.51 Score=26.76 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=28.7
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+.|++.|-|++ -+|+..+....+.|.+|++.|.+++
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~d~~~~ 42 (255)
T PRK06057 6 AGRVAVITGGASGIGLATARRMRAEGATVVVGDIDPE 42 (255)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 9998999684888999999999986998999969889
No 267
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=92.88 E-value=0.81 Score=25.39 Aligned_cols=66 Identities=20% Similarity=0.093 Sum_probs=44.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCE-EEEEECCCCC-------CHHHC-CCEEEECCCCCHHHHHHHHHH--CCEEE
Q ss_conf 78999809-89899999999887978-9999676777-------13422-682798789999999999741--99999
Q gi|254780158|r 4 KTIGIIGG-GQLARMLSMSAARLGFC-TVILDPDSNC-------PANQV-SNQQIAARHDDIKALNTFADI--CDYAT 69 (354)
Q Consensus 4 k~IgIlG~-GqL~rml~~aA~~lG~~-v~v~d~~~~~-------pa~~~-ad~~~~~~~~D~~~l~~~~~~--~Dvit 69 (354)
|||+|.|| |.+|.-|+....+.|.+ ++++|..... |..+. --.++.+|..|.+.+.++.+. +|+|.
T Consensus 2 KkILVTGg~GFIGs~Lv~~Ll~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~~pD~Vi 79 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEYQPDCVM 79 (355)
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEE
T ss_conf 969993787579999999999769988999828987652544445412787169980058899999999861998899
No 268
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.87 E-value=0.43 Score=27.22 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=29.1
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 988789998098-98999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|+.|++.|-|++ -+|+.++.+..+.|++|++.+..
T Consensus 2 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~ 37 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAKEGYDIAINYAR 37 (250)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 894989995876699999999999889989997599
No 269
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=92.87 E-value=0.26 Score=28.69 Aligned_cols=36 Identities=25% Similarity=0.459 Sum_probs=31.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+|==+.|||+|-=|.-.+..|.++|.+|.+++.+.
T Consensus 1 M~~yDviVIG~GpaG~~aA~~aa~~G~~ValIEk~~ 36 (441)
T PRK08010 1 MNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSN 36 (441)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 997898999978899999999997899299997589
No 270
>PRK06500 short chain dehydrogenase; Provisional
Probab=92.84 E-value=0.46 Score=27.05 Aligned_cols=37 Identities=24% Similarity=0.199 Sum_probs=30.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.+++...+.|.+|++++.+++
T Consensus 4 l~gK~~lITGas~GIG~aiA~~la~~Ga~V~i~~r~~~ 41 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFAAEGARVAITGRDAA 41 (249)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89988999376878999999999987999999969989
No 271
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=92.81 E-value=0.83 Score=25.33 Aligned_cols=11 Identities=27% Similarity=0.459 Sum_probs=5.6
Q ss_pred HHHHHHHHHHC
Q ss_conf 89999999818
Q gi|254780158|r 283 QFEQHIRSITN 293 (354)
Q Consensus 283 qfe~h~rai~g 293 (354)
+|+.-++.+..
T Consensus 298 ~~~~a~~li~~ 308 (347)
T PRK10309 298 EWETASRLLTE 308 (347)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999983
No 272
>PRK08017 short chain dehydrogenase; Provisional
Probab=92.80 E-value=0.66 Score=25.97 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=29.1
Q ss_pred CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 8789998098-9899999999887978999967677
Q gi|254780158|r 3 KKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 3 ~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+|++.|-|++ -+|+.++....+.|++|++.+.+++
T Consensus 2 ~K~vlITGassGIG~a~A~~la~~G~~V~~~~r~~~ 37 (256)
T PRK08017 2 QKSVLITGCSSGIGLESALELKRQGFRVLAGCRKPD 37 (256)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 978999658768999999999987999999969989
No 273
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=92.78 E-value=0.77 Score=25.55 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=30.0
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+.|++.|-|++ -+|+.+++...+.|..|++.+.+.+
T Consensus 10 ~gKvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~~ 46 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD 46 (255)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 9998999588778999999999987999999969889
No 274
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=92.78 E-value=0.69 Score=25.83 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=30.3
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++.+..+.|.+|++.|.+.+
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~i~d~~~~ 40 (256)
T PRK07067 3 LQGKVALLTGAASGIGEAVAQRYLREGARVVLADIKPA 40 (256)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89988999376778999999999987999999979889
No 275
>PRK07576 short chain dehydrogenase; Provisional
Probab=92.78 E-value=0.42 Score=27.32 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=40.8
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---HC-----CCEEEECCCCCHHHHHHHHH
Q ss_conf 88789998098-98999999998879789999676777134---22-----68279878999999999974
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---QV-----SNQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~-----ad~~~~~~~~D~~~l~~~~~ 63 (354)
+.|++.|-|++ -+|+.++....+.|.+|++.+.+.+.... .+ -...+.+|..|.+.+.++.+
T Consensus 7 ~gK~alVTGgs~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~ 77 (260)
T PRK07576 7 AGKNVFVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEALGVSADVRDYAAVEAAFA 77 (260)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
T ss_conf 89989995896199999999999879999999798899999999999539948999931899999999999
No 276
>PRK07831 short chain dehydrogenase; Provisional
Probab=92.78 E-value=0.49 Score=26.87 Aligned_cols=64 Identities=11% Similarity=0.143 Sum_probs=43.2
Q ss_pred CCCCEEEEECCC-H-HHHHHHHHHHHCCCEEEEEECCCCCCHH---HC----C-C--EEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-9-8999999998879789999676777134---22----6-8--2798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-Q-LARMLSMSAARLGFCTVILDPDSNCPAN---QV----S-N--QQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-q-L~rml~~aA~~lG~~v~v~d~~~~~pa~---~~----a-d--~~~~~~~~D~~~l~~~~~~ 64 (354)
++.|++.|-|++ + +|+.+++...+.|.+|++.|.+.+.-.. ++ . . ..+.+|..|.+.+..+.+.
T Consensus 14 L~gKvalVTGgsg~GIG~a~a~~la~~Ga~V~i~d~~~~~~~e~~~~~~~~~g~~~v~~~~~Dvt~~~~v~~~v~~ 89 (261)
T PRK07831 14 LAGKVVVVTAAAGTGIGSATARRALEEGADVVISDIHERRLGETADELAAELGLGRVEGVVCDVTSEAQVDALIDA 89 (261)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 6998499949996478999999999879989998087777899999999843877289997568999999999999
No 277
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=92.76 E-value=0.58 Score=26.34 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=27.5
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 88789998098-98999999998879789999676
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~ 35 (354)
++|++.|-|++ -+|+.++....+.|++|++.+..
T Consensus 5 ~~KvalVTGa~~GIG~aia~~la~~Ga~V~i~~~~ 39 (252)
T PRK06947 5 DRKVVLITGASRGIGRATAVLAAARGWSVGINYAR 39 (252)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 99089993883589999999999879989998089
No 278
>PRK05875 short chain dehydrogenase; Provisional
Probab=92.74 E-value=0.45 Score=27.10 Aligned_cols=37 Identities=16% Similarity=0.409 Sum_probs=31.6
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.+.+++
T Consensus 5 L~gK~alVTGas~GIG~aiA~~la~~Ga~Vii~~r~~~ 42 (277)
T PRK05875 5 LQDRTYLVTGGGSGIGKGVAAALVAAGAAVMIVGRNPD 42 (277)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89998999488749999999999987998999979889
No 279
>cd01171 YXKO-related B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
Probab=92.73 E-value=0.84 Score=25.26 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=56.7
Q ss_pred EEEEECCCHH----HHHHHHHHHHCCC-EEEEEECCCCCC-HHHCCCEEEECCCCC--HHHHHHHHHHCCEEEECCC---
Q ss_conf 8999809898----9999999988797-899996767771-342268279878999--9999999741999998772---
Q gi|254780158|r 5 TIGIIGGGQL----ARMLSMSAARLGF-CTVILDPDSNCP-ANQVSNQQIAARHDD--IKALNTFADICDYATYESE--- 73 (354)
Q Consensus 5 ~IgIlG~GqL----~rml~~aA~~lG~-~v~v~d~~~~~p-a~~~ad~~~~~~~~D--~~~l~~~~~~~Dvit~E~E--- 73 (354)
+++|+||.+. +.|-+++|-|.|- .|.++.|....+ ......+.++.++.+ ...+....+++|++..-..
T Consensus 10 ~vliigGs~~~~GA~~laa~aAlr~GaGlv~v~~~~~~~~~~~~~~Pe~iv~~~~~~~~~~~~~~~~~~~aiviGpGlg~ 89 (254)
T cd01171 10 RVLVIGGSRGYTGAAYLAALAALRAGAGLVTVATPPEAAAVIKSYSPELMVHPLLETDIEELLELLERADAVVIGPGLGR 89 (254)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCC
T ss_conf 59999699999779999999999968691999968889999976298799943777445677765335878998278899
Q ss_pred -CCCHHHHHHH-HHCCCCCCCHHHHHHHHCC
Q ss_conf -2211333444-3020034876778763152
Q gi|254780158|r 74 -NIPEKSISYL-STLLPTYPSSRAIEISQDR 102 (354)
Q Consensus 74 -~i~~~~l~~l-~~~~~v~P~~~al~~~~dK 102 (354)
.-....++.+ ....++..+++++....+.
T Consensus 90 ~~~~~~~~~~~~~~~~p~ViDAdaL~~l~~~ 120 (254)
T cd01171 90 DEEAAEILEKALAKDKPLVLDADALNLLADE 120 (254)
T ss_pred CHHHHHHHHHHHHCCCCEEECCHHHHHHHHC
T ss_conf 9999999999984499858863767866408
No 280
>PRK06701 short chain dehydrogenase; Provisional
Probab=92.68 E-value=0.55 Score=26.51 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=30.4
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.+++...+.|.+|++.+.+.+
T Consensus 43 L~GKvalVTGgs~GIG~aiA~~la~~GA~V~i~~~~~~ 80 (289)
T PRK06701 43 LKGKVALITGGDSGIGRAVAVAFAKEGADIAIVYLDEH 80 (289)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf 79998999682579999999999987998999828946
No 281
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.67 E-value=0.55 Score=26.50 Aligned_cols=63 Identities=16% Similarity=0.166 Sum_probs=38.8
Q ss_pred CCCCEEEEEC--CC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC------EEEECCCCCHHHHHHHHH
Q ss_conf 9887899980--98-989999999988797899996767771342268------279878999999999974
Q gi|254780158|r 1 MKKKTIGIIG--GG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSN------QQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG--~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad------~~~~~~~~D~~~l~~~~~ 63 (354)
++-|++.|-| +| -+|+..++.+.+.|.+|++.+.+........+. ..+..|..|.+.+.++.+
T Consensus 5 L~GK~~lVTG~~~~~GIG~a~A~~la~~GA~Vvi~~~~~~~~~~~~~~~~~~~~~~i~~Dv~~~~~v~~~~~ 76 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHIARVAQEQGAEVVLTGFRRLRLTERIAKRLPEPAPVLELDVTNEEHLASLAD 76 (256)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
T ss_conf 499979998998856899999999998799999983893589999998658887599942889999999999
No 282
>PRK05868 hypothetical protein; Validated
Probab=92.67 E-value=0.27 Score=28.55 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=31.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 78999809898999999998879789999676777
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|||+|+|+|--|.-++...++.|++|.+++..+..
T Consensus 2 ~kVlIvGaGiAGlalA~~L~r~G~~VtV~Er~p~~ 36 (372)
T PRK05868 2 KTVLVSGASVAGTAAAYWLGRHGYSVTMVERHPGL 36 (372)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 99999898889999999998589988999579998
No 283
>PRK06138 short chain dehydrogenase; Provisional
Probab=92.61 E-value=0.81 Score=25.37 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=30.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.|.+.+
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~~ 40 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAE 40 (252)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89988999474679999999999987998999968878
No 284
>PRK12831 putative oxidoreductase; Provisional
Probab=92.59 E-value=0.32 Score=28.12 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=32.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf 887899980989899999999887978999967677713
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA 40 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa 40 (354)
+.|||.|||||--|.--|..+.++||+|.+++..+..-+
T Consensus 139 ~gkkVAVIGsGPAGLsaA~~La~~G~~VtVfE~~~~~GG 177 (464)
T PRK12831 139 KGKKVAVIGSGPAGLTCAGDLAKKGYDVTIFEALHEPGG 177 (464)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 999899989768999999999976991799827888898
No 285
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=92.59 E-value=0.21 Score=29.37 Aligned_cols=36 Identities=33% Similarity=0.449 Sum_probs=30.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf 88789998098989999999988797-8999967677
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~ 37 (354)
..|+++|||+|--||-.+.++.++|. ++.+++++.+
T Consensus 18 ~~k~vlIlGaGGaarai~~aL~~~g~~~I~i~nR~~~ 54 (155)
T cd01065 18 KGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLE 54 (155)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 7999999867589999999999719982288608999
No 286
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=92.58 E-value=0.81 Score=25.38 Aligned_cols=112 Identities=12% Similarity=0.065 Sum_probs=70.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHC-CCEEEECCCCCHHHHHHHHHHCCEEEECCC--------
Q ss_conf 78999809-89899999999887978999967677713422-682798789999999999741999998772--------
Q gi|254780158|r 4 KTIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQV-SNQQIAARHDDIKALNTFADICDYATYESE-------- 73 (354)
Q Consensus 4 k~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~-ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E-------- 73 (354)
.+|+++|+ |++|+-++.++.+.|++|.+..++++...... .-....+++.|.+.+....+..|.+.+-..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~~~~G~~~~~~i~~~~~~~~~~ 80 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDAF 80 (275)
T ss_pred CCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCH
T ss_conf 93899867775799999999975986999736822111103785288456416077999848941799952545566301
Q ss_pred -CCCHHHHHHHHH--C--CC--C----C-CC-HHHHHHHHCCHHHHHHHHHCCCC
Q ss_conf -221133344430--2--00--3----4-87-67787631527888887650588
Q gi|254780158|r 74 -NIPEKSISYLST--L--LP--T----Y-PS-SRAIEISQDRLYEKKFFQESGLT 115 (354)
Q Consensus 74 -~i~~~~l~~l~~--~--~~--v----~-P~-~~al~~~~dK~~~K~~l~~~gip 115 (354)
..+........+ . .. + . .. .........|...-+.+.+.|+|
T Consensus 81 ~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~sg~~ 135 (275)
T COG0702 81 RAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALARAKAAVEAALRSSGIP 135 (275)
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 2003678999998627442432687502356688067899999999999856986
No 287
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=92.57 E-value=0.74 Score=25.63 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=27.4
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEE
Q ss_conf 988789998098-989999999988797899996
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILD 33 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d 33 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++..
T Consensus 4 L~gKvalVTG~s~GIG~aiA~~la~~Ga~V~i~~ 37 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINY 37 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEC
T ss_conf 8969899917276899999999998799899976
No 288
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=92.57 E-value=0.32 Score=28.14 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=33.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH
Q ss_conf 8878999809898999999998879789999676777134
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPAN 41 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~ 41 (354)
+.|||.|||||--|.--|....++||+|.+++..+..-++
T Consensus 136 tgkkVAVIGaGPAGLsaA~~La~~G~~VtVfE~~~~~GGm 175 (560)
T PRK12771 136 TGKRVAVIGGGPAGLSAAYQLRRLGHAVTIFEAGPKLGGM 175 (560)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCE
T ss_conf 8998999897789999999999769858996767888988
No 289
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.54 E-value=0.26 Score=28.67 Aligned_cols=85 Identities=14% Similarity=0.169 Sum_probs=49.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHH--
Q ss_conf 988789998098989999999988797899996767771342268279878999999999974199999877222113--
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEK-- 78 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~-- 78 (354)
|--|||+|+|-|..|+-.+..+.+.|..|+++|...+.... .+. +...+. +....+.+.+|.|..- ..||.+
T Consensus 1 ~~~KkvlV~GlG~SG~s~a~~L~~~g~~v~~~D~~~~~~~~--~~~-~~~~~~--~~~~~~~~~~d~vv~S-PGi~~~~p 74 (418)
T PRK00683 1 MGLQRVVVLGLGVTGKSVARFLAQKGVYVIGVDNSLEALQS--CPY-IHERYL--EGAEEFPEQVDLVVRS-PGIKPYHP 74 (418)
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCHHHHHH--CCH-HHHHCC--CCHHHCCCCCCEEEEC-CCCCCCCH
T ss_conf 99866999808887999999999782989998298145454--614-555405--6233242349899989-98599889
Q ss_pred HHHH-HHHCCCCCC
Q ss_conf 3344-430200348
Q gi|254780158|r 79 SISY-LSTLLPTYP 91 (354)
Q Consensus 79 ~l~~-l~~~~~v~P 91 (354)
.+.. .+.++++.-
T Consensus 75 ~~~~a~~~~i~i~s 88 (418)
T PRK00683 75 WVEAAVALKIPVVT 88 (418)
T ss_pred HHHHHHHCCCCCCC
T ss_conf 99999986997540
No 290
>pfam10727 Rossmann-like Rossmann-like domain. This family of proteins contain a Rossmann-like domain.
Probab=92.52 E-value=0.31 Score=28.16 Aligned_cols=70 Identities=16% Similarity=0.272 Sum_probs=46.1
Q ss_pred EEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHH
Q ss_conf 99809898999999998879789999676777134226827987899999999997419999987722211333444
Q gi|254780158|r 7 GIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEKSISYL 83 (354)
Q Consensus 7 gIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l~~l 83 (354)
||||.|..|.-|+.+..+.|+.++.+....++...+.+. .....+.+. .++++++|+|.. .+|.+.+..+
T Consensus 1 GiIGaGrvG~~L~~al~~aGh~v~gv~srs~~s~~~a~~-~~~~~~~~~---~ev~~~adlv~i---tvPDd~I~~v 70 (111)
T pfam10727 1 GIISAGRVGVALGEALERAGHVVHAISAISDASRERAER-RLDSPVLPI---PDVIRRAELVVL---AVPDAELPGL 70 (111)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH-HCCCCCCCH---HHHHHHCCEEEE---ECCHHHHHHH
T ss_conf 943765779999999997898289998389889999998-669976795---898976799999---8978889999
No 291
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=92.50 E-value=0.56 Score=26.46 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=28.5
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 988789998098-98999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~ 35 (354)
++.|++.|-|++ -+|+.++.+..+.|..|++.+..
T Consensus 5 L~gKvalVTGa~~GIG~aia~~la~~Ga~V~i~~~~ 40 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 999989996847789999999999879999997289
No 292
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=92.48 E-value=0.25 Score=28.82 Aligned_cols=110 Identities=13% Similarity=0.195 Sum_probs=58.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCH---HHCCCE------EEECCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 789998098989999999988797--8999967677713---422682------79878999999999974199999877
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPA---NQVSNQ------QIAARHDDIKALNTFADICDYATYES 72 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa---~~~ad~------~~~~~~~D~~~l~~~~~~~Dvit~E~ 72 (354)
|||+|||.|+.|..++..+...|+ +++.+|.+++..- +.+.|- .......|.+ -.+.+|+|..-.
T Consensus 1 rKI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~G~a~DL~~~~~~~~~~~~i~~~~~~----~~~~aDvvVitA 76 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS----DCKDADIVVITA 76 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHH----HHCCCCEEEECC
T ss_conf 9599999698899999999857998779998189870176999887013305997399608878----847899999906
Q ss_pred CCCCHHHHHHHHHCCCCCCCHHHHH-HHHCCHHHHHHHHHCCC--CCCCCCCCCHHHHHHH
Q ss_conf 2221133344430200348767787-63152788888765058--8674321000688886
Q gi|254780158|r 73 ENIPEKSISYLSTLLPTYPSSRAIE-ISQDRLYEKKFFQESGL--TTVDFYEINSQESLTN 130 (354)
Q Consensus 73 E~i~~~~l~~l~~~~~v~P~~~al~-~~~dK~~~K~~l~~~gi--pt~~~~~v~s~~el~~ 130 (354)
+.+--|+.+-.. +..|-...|....+..- |-+-+..++|+-|+..
T Consensus 77 -------------G~~rk~g~~R~dLl~~N~~I~k~i~~~i~~~~p~aivivvtNPvDvmt 124 (306)
T cd05291 77 -------------GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVIT 124 (306)
T ss_pred -------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
T ss_conf -------------766799998789999789999999999872299718999358167899
No 293
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=92.47 E-value=0.54 Score=26.55 Aligned_cols=37 Identities=24% Similarity=0.371 Sum_probs=30.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-||+ -+|+.++.+..+.|++|+.++.+++
T Consensus 3 L~~Kv~lITGgs~GIG~a~a~~la~~G~~V~~~~r~~~ 40 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGARVVIYDSNEE 40 (246)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89988999389758999999999987999999979999
No 294
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=92.47 E-value=0.29 Score=28.37 Aligned_cols=32 Identities=19% Similarity=0.341 Sum_probs=29.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 89998098989999999988797899996767
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
||.|||+|-.|...|....+.|++|.++|...
T Consensus 2 ~VvIIGaGi~G~stA~~La~~G~~V~vler~~ 33 (416)
T PRK00711 2 RVVVLGSGVVGVTSAWYLARAGHEVTVIDRQP 33 (416)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 79999944999999999996899689996999
No 295
>PRK07832 short chain dehydrogenase; Provisional
Probab=92.45 E-value=0.45 Score=27.13 Aligned_cols=61 Identities=21% Similarity=0.229 Sum_probs=44.7
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHC----CC--EEEECCCCCHHHHHHHHHH
Q ss_conf 789998098-9899999999887978999967677713---422----68--2798789999999999741
Q gi|254780158|r 4 KTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQV----SN--QQIAARHDDIKALNTFADI 64 (354)
Q Consensus 4 k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~----ad--~~~~~~~~D~~~l~~~~~~ 64 (354)
||+.|-|++ -+|+.++....+.|++|++.|.+.+.-. ..+ .+ ..+..|..|.+.+.++++.
T Consensus 1 K~alITGassGIG~a~A~~la~~Ga~v~l~~r~~~~l~~~~~~l~~~g~~~~~~~~~Dvsd~~~v~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 97999472019999999999988998999989889999999999845897147885668999999999999
No 296
>pfam03721 UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain. The UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate.
Probab=92.39 E-value=0.63 Score=26.10 Aligned_cols=33 Identities=24% Similarity=0.320 Sum_probs=30.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 899980989899999999887978999967677
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+|+|+|-|-+|.-++....+.|++|+.+|.++.
T Consensus 2 kI~ViGlGyVGl~~a~~la~~G~~V~g~D~d~~ 34 (185)
T pfam03721 2 RIAVIGLGYVGLPTAVCLAEIGHDVVGVDINQS 34 (185)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 799989787489999999948993999979989
No 297
>PRK13984 putative oxidoreductase; Provisional
Probab=92.36 E-value=0.37 Score=27.69 Aligned_cols=38 Identities=21% Similarity=0.293 Sum_probs=31.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 88789998098989999999988797899996767771
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
+.|||.|||+|--|.--|.-..++||+|.|++..+..-
T Consensus 282 tGKKVAVIGsGPAGLaaA~~Lar~Gh~VtVFE~~~~~G 319 (604)
T PRK13984 282 KGKKVAIVGSGPAGLSAAYFLATMGYEVEVYESLSKPG 319 (604)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 89989998986899999999998698689974567789
No 298
>PRK07776 consensus
Probab=92.33 E-value=0.56 Score=26.48 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=30.8
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++.+..+.|.+|++.+.+++
T Consensus 6 L~gKv~lITG~~~GIG~aiA~~la~~Ga~V~i~~~~~~ 43 (252)
T PRK07776 6 LTGRTAIVTGASRGIGLAIAQALAAAGANVVITARKQE 43 (252)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 99998999477879999999999987998999979889
No 299
>PRK12770 putative glutamate synthase subunit beta; Provisional
Probab=92.29 E-value=0.28 Score=28.44 Aligned_cols=36 Identities=25% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 878999809898999999998879789999676777
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
=|||.|||+|-=|.--+..|.++|++|.+++..+..
T Consensus 17 gkkV~IIGaGPaGlsAA~~aa~~G~~v~viEk~~~~ 52 (350)
T PRK12770 17 GKKVAIIGAGPAGLAAAGYLACLGHEVHVYDKLPEP 52 (350)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 798999995588999999999789985999536969
No 300
>PRK05872 short chain dehydrogenase; Provisional
Probab=92.29 E-value=0.91 Score=25.03 Aligned_cols=64 Identities=16% Similarity=0.210 Sum_probs=45.4
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHCCC--EEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-9899999999887978999967677713---42268--2798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQVSN--QQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~ad--~~~~~~~~D~~~l~~~~~~ 64 (354)
++.|++.|-|++ -+|+.++....+.|.+|+++|.+++.-. ..+.+ ..+.+|..|.+.+.++++.
T Consensus 7 L~gKvalITGassGIG~aiA~~la~~Ga~Vvl~dr~~~~l~~~~~~lg~~~~~~~~DVtd~~~v~~~v~~ 76 (296)
T PRK05872 7 LDGKVVFVTGAARGVGAELARRLHARGAKVALVDLEEAELAALAAELGDRVLTVVADVTDLAAMQAAAEE 76 (296)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 5998799927105899999999998799899998999999999998388738999827999999999999
No 301
>PRK06753 hypothetical protein; Provisional
Probab=92.26 E-value=0.27 Score=28.56 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=30.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8999809898999999998879789999676777
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
||.|+|+|--|..++.+.++.|++|.+++.++..
T Consensus 2 kV~IVGaGiaGL~~A~~L~~~G~~v~V~Er~~~~ 35 (373)
T PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHTVKVFEKNESV 35 (373)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 8999994589999999999779999998889998
No 302
>TIGR03023 WcaJ_sugtrans Undecaprenyl-phosphate glucose phosphotransferase. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.
Probab=92.21 E-value=0.77 Score=25.52 Aligned_cols=66 Identities=21% Similarity=0.272 Sum_probs=37.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHH---HCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH--CCEEEE
Q ss_conf 8878999809898999999998---87978999967677713422682798789999999999741--999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAA---RLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI--CDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~---~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~--~Dvit~ 70 (354)
..+++.|+|+|+.+++++...+ .+|++++.+-+++........+..+.+ +.+.+.++++. +|-|.+
T Consensus 127 ~~rrvLIIG~g~~~~~l~~~l~~~~~~G~~vvG~vdd~~~~~~~~~~~pvlg---~~~~l~~~i~~~~ideVii 197 (451)
T TIGR03023 127 NLRRVLIVGAGELGRRLAERLARNPELGYRVVGFFDDRPDARTGVRGVPVLG---KLDDLEELIREGEVDEVYI 197 (451)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCC---CHHHHHHHHHHCCCCEEEE
T ss_conf 8754999968689999999997194368489999838854444457997369---8999999999679988999
No 303
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=92.13 E-value=0.41 Score=27.36 Aligned_cols=62 Identities=13% Similarity=0.137 Sum_probs=45.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCE-EEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 7899980989899999999887978999967677713422682-798789999999999741999998
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQ-QIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~-~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
.||++||=|..|.-|+.-..+-|+++.++|.++..++...... ... .+...+.++.+|+|..
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~-----a~s~~eaa~~aDvVit 63 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATV-----AASPAEAAAEADVVIT 63 (286)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEE-----CCCHHHHHHHCCEEEE
T ss_conf 90799857352599999999779878998088566568999729800-----3889999961998999
No 304
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=92.11 E-value=0.4 Score=27.45 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 88789998098989999999988797899996767771
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
+.|||.|||||--|.--|.-..++||+|.|++..+..-
T Consensus 309 ~gkKVAVIGsGPAGLaaA~~Lar~G~~VTVfE~~~~~G 346 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIG 346 (639)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 89989998975899999999997599069993688889
No 305
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=92.10 E-value=0.4 Score=27.44 Aligned_cols=37 Identities=22% Similarity=0.330 Sum_probs=30.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8878999809898999999998879789999676777
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
+.|||.|||||--|.--|....++||+|.+++..+..
T Consensus 326 tGKkVAIIGsGPAGLsaA~~Lar~G~~VTVFE~~~~~ 362 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLTRNGVAVTVYDRHPEI 362 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 8998999897789999999999769757995257778
No 306
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.09 E-value=1 Score=24.73 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=30.9
Q ss_pred CCCCEEEEECCCH---HHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 9887899980989---8999999998879789999676777
Q gi|254780158|r 1 MKKKTIGIIGGGQ---LARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k~IgIlG~Gq---L~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+.|++.|-|+++ +|+.+++...+.|+.|++.+...+.
T Consensus 3 L~gKvalVTGasr~~GIG~aiA~~la~~Ga~V~~~~~~~~~ 43 (257)
T PRK12748 3 LMKKIAIVTGASRLNGIGAAICRVLAQKGIDIFFTYWSQYD 43 (257)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 99988999288999854999999999879999997075255
No 307
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=92.07 E-value=0.52 Score=26.66 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=44.6
Q ss_pred CCCC--EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH---CCCE-EEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 9887--89998098989999999988797899996767771342---2682-798789999999999741999998
Q gi|254780158|r 1 MKKK--TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQ---VSNQ-QIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 1 M~~k--~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~---~ad~-~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
|+++ -|||||=|-.|+.|+.-..+-|++|.|+|.+......- .... ..+..+.+.+.+..-.+++..|..
T Consensus 1 m~~~~~~IGiIGLGvMG~nmA~Nl~~~G~~V~vynrt~~k~~~~~~~~~~~~~~i~~~~sl~e~v~sl~~pr~Iil 76 (474)
T PTZ00142 1 MDEGESDIGLIGLAVMGQNLSLNMYSRGFKVSVYNRTTEKVEEFMKKAKEGNKFVKGYHSLEELVNSLKRPRRVML 76 (474)
T ss_pred CCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 9977674668736386799999999789879997798799999998532246776466789999973799998999
No 308
>PRK12744 short chain dehydrogenase; Provisional
Probab=92.07 E-value=1 Score=24.72 Aligned_cols=37 Identities=27% Similarity=0.373 Sum_probs=30.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|+.|++.|-|++ -+|+.++.+..+.|.+|++++.+.+
T Consensus 6 L~gKvalVTGgs~GIG~aiA~~la~~Ga~vv~~~~~~~ 43 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSA 43 (257)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 89998999288758999999999987998999937874
No 309
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=92.07 E-value=0.41 Score=27.35 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=32.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH
Q ss_conf 8878999809898999999998879789999676777134
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPAN 41 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~ 41 (354)
+.|+|.|||||--|.--+.-..++||+|.+++..+..-++
T Consensus 192 tGKkVAIIGaGPAGLsaAy~L~~~Gh~VTVfE~~~~~GGm 231 (652)
T PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGM 231 (652)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCE
T ss_conf 8997999683789999999999779906998158888986
No 310
>PRK08862 short chain dehydrogenase; Provisional
Probab=92.07 E-value=0.85 Score=25.23 Aligned_cols=62 Identities=21% Similarity=0.303 Sum_probs=42.6
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH------HHCCC--EEEECCCCCHHHHHHHH
Q ss_conf 988789998098-9899999999887978999967677713------42268--27987899999999997
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA------NQVSN--QQIAARHDDIKALNTFA 62 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa------~~~ad--~~~~~~~~D~~~l~~~~ 62 (354)
|+.|+++|-|++ -+|+.++....+.|.+|+++|.+++.-. ..... ..+..+..|.+.+.++.
T Consensus 3 lk~Kv~lITGas~GIG~aiA~~~A~~Ga~Vii~~r~~~~l~~~~~~i~~~g~~~~~~~~d~~~~~~v~~~~ 73 (227)
T PRK08862 3 IKNSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALNDTYEQCSALTDNVYSYQLKDFSQESIRHLF 73 (227)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
T ss_conf 99999999798879999999999987999999969999999999999975897489995166199999999
No 311
>PRK06475 salicylate hydroxylase; Provisional
Probab=92.06 E-value=0.32 Score=28.10 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=32.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8878999809898999999998879789999676777
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+-.|.|+|+|--|..++.++++.|++|.+++..+..
T Consensus 1 tr~~VlIVGaGiaGL~~A~~L~~~G~~v~V~E~~~~~ 37 (400)
T PRK06475 1 TRGSILIAGAGVAGLSAALELAARGWAVTIIEKAQEL 37 (400)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 9997999895889999999999789999999179988
No 312
>PRK08628 short chain dehydrogenase; Provisional
Probab=92.04 E-value=1 Score=24.70 Aligned_cols=36 Identities=22% Similarity=0.424 Sum_probs=30.1
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9887899980989-89999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQ-LARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~d~~~ 36 (354)
++.|++.|-|+++ +|+.+++...+.|..+++++.++
T Consensus 5 l~gKvalVTG~s~GIG~a~a~~la~~Ga~v~i~~~~~ 41 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVVFGRSA 41 (258)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 7999899927777899999999998799899980880
No 313
>PRK06184 hypothetical protein; Provisional
Probab=92.04 E-value=0.35 Score=27.81 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=32.4
Q ss_pred CCCC---EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 9887---8999809898999999998879789999676777
Q gi|254780158|r 1 MKKK---TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k---~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|++- -|.|+|+|--|.+++....+.|++|.+++..+..
T Consensus 1 m~~~~tTDVlIVGaGPvGL~lA~~La~~Gi~v~viEr~~~~ 41 (503)
T PRK06184 1 MTEYTTTDVLIVGAGPTGLTLAIELARRGVSFRLIEKSPTP 41 (503)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 99888579899990999999999999779989999489998
No 314
>PRK08013 hypothetical protein; Provisional
Probab=92.04 E-value=0.69 Score=25.87 Aligned_cols=36 Identities=19% Similarity=0.417 Sum_probs=32.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|++=-|.|+|+|--|..++.+..+.|++|.+++..+
T Consensus 1 M~~~DV~IvGaGpvGl~lA~~La~~G~~v~viE~~~ 36 (400)
T PRK08013 1 MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEHRV 36 (400)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 996788999935999999999971899589991899
No 315
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=92.04 E-value=0.53 Score=26.62 Aligned_cols=63 Identities=14% Similarity=0.187 Sum_probs=40.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 78999809898999999998879----78999967677713422682798789999999999741999998
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLG----FCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG----~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
.+||+||+|-.|..++....+-| .++++.+++++.-. ++++++=....+| ..++.+.+|+|..
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~-~l~~~~g~~~~~~---~~~~~~~advv~L 68 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA-ALAAEYGVVTTTD---NQEAVEEADVVFL 68 (266)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHH-HHHHHCCCCCCCC---HHHHHHHCCEEEE
T ss_conf 65899846889999999999668998023898379999999-9999849855686---7988740898999
No 316
>pfam01256 Carb_kinase Carbohydrate kinase. This family is related to pfam02110 and pfam00294 implying that it also is a carbohydrate kinase. (personal obs Yeats C).
Probab=92.03 E-value=0.99 Score=24.80 Aligned_cols=93 Identities=11% Similarity=0.088 Sum_probs=49.5
Q ss_pred EEEECCCH----HHHHHHHHHHHCCC-EEEEEECCCCCCH-HHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCC----C
Q ss_conf 99980989----89999999988797-8999967677713-4226827987899999999997419999987722----2
Q gi|254780158|r 6 IGIIGGGQ----LARMLSMSAARLGF-CTVILDPDSNCPA-NQVSNQQIAARHDDIKALNTFADICDYATYESEN----I 75 (354)
Q Consensus 6 IgIlG~Gq----L~rml~~aA~~lG~-~v~v~d~~~~~pa-~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~----i 75 (354)
|+||||.. =+.+-+.+|.|.|. .|.++.|....+. .....+.++.++.+ +.+.+..+++|++.+-... -
T Consensus 1 VLiIgGS~~~~GA~~Laa~aAlrsGaGlV~~~~p~~~~~~~~~~~Pe~~~~~~~~-~~~~~~~~~~dai~iGPGlG~~~~ 79 (241)
T pfam01256 1 VLVIGGSKDYTGAPLLAALAALRSGAGLVSVATDSEAIAVLKSPLPEVMVHPLPS-DEHAEKLSRYDAVVIGPGLGRDEK 79 (241)
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCEEEECCCC-HHHHHHHCCCCEEEEECCCCCCHH
T ss_conf 9899899999879999999999976595999976888878855395105646880-766766402888999689999989
Q ss_pred CHHHHHH-HHHCCCCCCCHHHHHHH
Q ss_conf 1133344-43020034876778763
Q gi|254780158|r 76 PEKSISY-LSTLLPTYPSSRAIEIS 99 (354)
Q Consensus 76 ~~~~l~~-l~~~~~v~P~~~al~~~ 99 (354)
....+.. +....++.-+++++...
T Consensus 80 ~~~~~~~~l~~~~p~ViDADaL~~l 104 (241)
T pfam01256 80 GKAALEEVLAKDCPLVIDADALNLL 104 (241)
T ss_pred HHHHHHHHHHCCCCEEEECHHHHHH
T ss_conf 9999999995399948872567765
No 317
>PRK08265 short chain dehydrogenase; Provisional
Probab=92.02 E-value=0.83 Score=25.32 Aligned_cols=37 Identities=24% Similarity=0.459 Sum_probs=30.7
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989-899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQ-LARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-||++ +|+-+++...+-|++|+++|.+.+
T Consensus 4 L~gKvalVTGgs~GIG~aia~~la~~Ga~V~i~~~~~~ 41 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGACVAILDIDAD 41 (261)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 99998999487768999999999987998999979889
No 318
>TIGR02352 thiamin_ThiO glycine oxidase ThiO; InterPro: IPR012727 This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as Escherichia coli that instead use tyrosine and the ThiH protein .; GO: 0016491 oxidoreductase activity, 0050660 FAD binding.
Probab=92.01 E-value=0.2 Score=29.41 Aligned_cols=58 Identities=22% Similarity=0.270 Sum_probs=41.5
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCC--CCCHHHCCCEE--EECCCC-CHHHHHHHHH
Q ss_conf 9998098989999999988797899996767--77134226827--987899-9999999974
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDS--NCPANQVSNQQ--IAARHD-DIKALNTFAD 63 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~--~~pa~~~ad~~--~~~~~~-D~~~l~~~~~ 63 (354)
|.|||||-.|.-.|..+.+-|+.|.++|+++ .+-|+++|.=- -.+... ..+.+..|+.
T Consensus 1 ~~ViGGGvIGL~~A~~L~~~G~~V~l~~~~~~~g~~AS~~AaGMLAP~aE~~~~~~~~f~L~~ 63 (357)
T TIGR02352 1 VLVIGGGVIGLSVAVELAERGHSVTLLDRDPTVGGGASWAAAGMLAPVAEVEYAEDPLFDLAL 63 (357)
T ss_pred CEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 978453187899999999749938999658604567788664332432667467674789999
No 319
>PRK08401 L-aspartate oxidase; Provisional
Probab=91.99 E-value=0.36 Score=27.78 Aligned_cols=35 Identities=37% Similarity=0.677 Sum_probs=30.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|+. |.|||+|-=|.+-+.+|.+.|.+|++++..+.
T Consensus 1 mtd--VlVVGsG~AGl~AAl~a~~~g~~v~li~k~~~ 35 (464)
T PRK08401 1 MMK--VGIVGGGLAGLTAAISLAKKGFDVTVIGPGSK 35 (464)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 987--99989769999999999974996999958999
No 320
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=91.97 E-value=1 Score=24.64 Aligned_cols=65 Identities=14% Similarity=0.131 Sum_probs=25.5
Q ss_pred EEEEECC-CHHHHHHHHHH-HHCCCEEEEEECCCCCCHHHCCC---EEEECCCCC-HHHHHHHHHHCCEEE
Q ss_conf 8999809-89899999999-88797899996767771342268---279878999-999999974199999
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSA-ARLGFCTVILDPDSNCPANQVSN---QQIAARHDD-IKALNTFADICDYAT 69 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA-~~lG~~v~v~d~~~~~pa~~~ad---~~~~~~~~D-~~~l~~~~~~~Dvit 69 (354)
+|+|||- |-.|--|++.. +.-+|+|+.+|-..+.....+.+ .|..+++.- .+=++.-+++||+|.
T Consensus 317 ~vlilgvngfig~hl~~~~l~~~~~~v~g~d~~~~~i~~~~~~p~~~f~~gdi~~~~~wie~~ikkcdvvl 387 (660)
T PRK08125 317 RVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVL 387 (660)
T ss_pred EEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCEEE
T ss_conf 79998344136789999985038858998865753455753499548881561466899998875457673
No 321
>PRK06523 short chain dehydrogenase; Provisional
Probab=91.93 E-value=1.1 Score=24.61 Aligned_cols=62 Identities=13% Similarity=0.019 Sum_probs=42.9
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 88789998098-9899999999887978999967677713422682798789999999999741
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~ 64 (354)
+.|++.|-|++ -+|+..+++..+.|.+|++.+.+...-.. -...++.+|..|.+.+.+++++
T Consensus 8 ~gK~alITG~s~GIG~aia~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~Dv~~~~~v~~~v~~ 70 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARFREAGARVVTTARSRPDDLP-EGVEFVAADLTTAEGCAAVARA 70 (260)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC-CCCEEEECCCCCHHHHHHHHHH
T ss_conf 99989994757699999999999879999999488401379-8628998379999999999999
No 322
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=91.90 E-value=0.42 Score=27.28 Aligned_cols=37 Identities=32% Similarity=0.518 Sum_probs=32.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|....|-|||+|--|.|-++.|.+.|.+|.++|..+.
T Consensus 1 ~~~~dviIIGgGpAGlMaA~~aa~~G~~V~lid~~~k 37 (408)
T COG2081 1 MERFDVIIIGGGPAGLMAAISAAKAGRRVLLIDKGPK 37 (408)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 9742189988878899999988646987999805864
No 323
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.88 E-value=0.45 Score=27.12 Aligned_cols=111 Identities=9% Similarity=0.100 Sum_probs=58.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCHHHCCCEEE---------ECCCCCHHHHHHHHHHCCEEEEC
Q ss_conf 8789998098989999999988797--899996767771342268279---------87899999999997419999987
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPANQVSNQQI---------AARHDDIKALNTFADICDYATYE 71 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa~~~ad~~~---------~~~~~D~~~l~~~~~~~Dvit~E 71 (354)
.+||+|||+|..|..++.++...|+ +++.+|.+++-......|-.. +....|.+ -++.+|+|.+.
T Consensus 3 r~Kv~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~h~~~~~~~~~v~~~~d~~----~~~~aDvVVit 78 (312)
T cd05293 3 RNKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS----VTANSKVVIVT 78 (312)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCHH----HHCCCCEEEEC
T ss_conf 88699989788899999999966998879999388983326888866040127985599379999----96899999988
Q ss_pred CCCCCHHHHHHHHHCCCCCCCHHHHH-HHHCCHHHHHHHHHCCC--CCCCCCCCCHHHHHHH
Q ss_conf 72221133344430200348767787-63152788888765058--8674321000688886
Q gi|254780158|r 72 SENIPEKSISYLSTLLPTYPSSRAIE-ISQDRLYEKKFFQESGL--TTVDFYEINSQESLTN 130 (354)
Q Consensus 72 ~E~i~~~~l~~l~~~~~v~P~~~al~-~~~dK~~~K~~l~~~gi--pt~~~~~v~s~~el~~ 130 (354)
.. .+--|+.+-.. ...|-...|+...+..- |.+-+..++|+-|+..
T Consensus 79 AG-------------~~~k~g~~R~dLl~~N~~I~~~i~~~i~~~~p~~ivivvsNPvDv~t 127 (312)
T cd05293 79 AG-------------ARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMT 127 (312)
T ss_pred CC-------------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHH
T ss_conf 99-------------99998988899999889999999999884199846996689189999
No 324
>PRK06346 consensus
Probab=91.85 E-value=0.89 Score=25.11 Aligned_cols=63 Identities=14% Similarity=0.230 Sum_probs=41.6
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHCC-----CEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-9899999999887978999967677713---4226-----8279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQVS-----NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~a-----d~~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-||+ -+|+.+++...+.|.+|+++|.+.+..- ..+. -..+.+|..|.+.+.++++
T Consensus 3 l~gKv~lITGgs~GIG~a~a~~la~~Ga~V~i~~r~~e~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~i~ 74 (251)
T PRK06346 3 LKGKVAIVTGAASGMGKSIAELFAKEGAKVVVADLNLERAQKVVEEITSNGGTAIAVVANVTKQEDIENMVD 74 (251)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 899889994757889999999999879989999798999999999999639908999778898999999999
No 325
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=91.85 E-value=0.71 Score=25.75 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=31.1
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++....+.|.+|++++.+++
T Consensus 4 L~gK~alVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~ 41 (263)
T PRK06200 4 LTGQVALITGGGSGIGRALVERFLAEGARVAVLERSAE 41 (263)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 17288999586679999999999987999999979999
No 326
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.83 E-value=0.43 Score=27.23 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=32.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8878999809898999999998879789999676777
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
..|+|+|+|-|..|+-.+..+.++|++|.++|..++.
T Consensus 13 ~gk~v~V~GlG~sG~s~a~~L~~~G~~v~~~D~~~~~ 49 (481)
T PRK01438 13 SGLRVVVAGLGVSGFPAADALHELGASVTVVADGDDD 49 (481)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 8998999957588999999999679989999799874
No 327
>PRK07825 short chain dehydrogenase; Provisional
Probab=91.79 E-value=1.1 Score=24.51 Aligned_cols=63 Identities=22% Similarity=0.244 Sum_probs=42.8
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHCC-CEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-9899999999887978999967677713---4226-8279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQVS-NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~a-d~~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.|.+.+.-. ..+. ...+..|..|.+.+.++.+
T Consensus 3 l~gKvvlITGassGIG~a~A~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~DVtd~~~v~~~~~ 70 (273)
T PRK07825 3 LRGKVIAITGGARGIGLATARALAALGAKVAIGDLDEALAKESAAELGLVVGGPLDVTDPASFAAFLD 70 (273)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
T ss_conf 99988999262339999999999987998999979999999999860785599914799999999999
No 328
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.78 E-value=0.4 Score=27.43 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=31.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 8789998098989999999988797899996767771
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
++||+|+|.|..|+-.+..+.++|.+|.+.|..+...
T Consensus 17 ~~kvlV~GlG~SG~s~a~~L~~~G~~v~~~D~~~~~~ 53 (476)
T PRK00141 17 RGRVLVAGAGVSGLGIAKMLSELGCDVVVADDNETQR 53 (476)
T ss_pred CCCEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCHH
T ss_conf 9988999227889999999997899799998998703
No 329
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=91.75 E-value=0.39 Score=27.50 Aligned_cols=34 Identities=29% Similarity=0.464 Sum_probs=31.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 9887899980989899999999887978999967
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDP 34 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~ 34 (354)
|.|..|.|||||-=|.+-+++|.+.|.+|.+++-
T Consensus 1 m~~~DVlVIGsG~AGl~AAi~a~~~G~~V~v~~k 34 (589)
T PRK08641 1 MAKKKVIVVGGGLAGLMATIKAAEAGVHVDLFSL 34 (589)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9868789989869999999999875997799977
No 330
>pfam00670 AdoHcyase_NAD S-adenosyl-L-homocysteine hydrolase, NAD binding domain.
Probab=91.75 E-value=0.53 Score=26.61 Aligned_cols=67 Identities=13% Similarity=0.126 Sum_probs=49.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCC
Q ss_conf 8878999809898999999998879789999676777134226827987899999999997419999987722
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESEN 74 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~ 74 (354)
.-|++.++|=|-.||=.|+.++.||.+|+|++.+|-+-.....|-|-+.++ .+.++..|++..-..+
T Consensus 22 aGk~vvV~GYG~~GkGvA~~~rg~Ga~V~V~EvDPi~aleA~mdGf~V~~~------~ea~~~aDi~VTaTG~ 88 (162)
T pfam00670 22 AGKVAVVCGYGDVGKGCAASLKGQGARVIVTEIDPICALQAAMEGFQVVTL------EEVVKKADIFVTTTGN 88 (162)
T ss_pred CCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCH------HHHHHCCCEEEECCCC
T ss_conf 487899967876677799986229998999947930699998649954788------8986049999992489
No 331
>PRK06949 short chain dehydrogenase; Provisional
Probab=91.75 E-value=0.8 Score=25.43 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=29.9
Q ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 887899980989-89999999988797899996767
Q gi|254780158|r 2 KKKTIGIIGGGQ-LARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 2 ~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~d~~~ 36 (354)
+.|++.|-|+++ +|+.++.+..+.|.+|++.+.+.
T Consensus 8 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~~~~ 43 (258)
T PRK06949 8 EGKVALVTGASSGLGQRFAQVLSQAGAKVVLASRRV 43 (258)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 999899958577999999999998799999996988
No 332
>PRK07109 short chain dehydrogenase; Provisional
Probab=91.74 E-value=0.69 Score=25.85 Aligned_cols=64 Identities=20% Similarity=0.250 Sum_probs=47.3
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---H---CC--CEEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134---2---26--82798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---Q---VS--NQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~---~a--d~~~~~~~~D~~~l~~~~~~ 64 (354)
+++|+|.|-|+. -+|+.++.+..+.|++|++++.+++.-.. . .. -..+..|..|.+.+.++++.
T Consensus 6 l~~KvVvITGASsGIGra~A~~fA~~Ga~Vvl~aR~~~~L~~~a~e~~~~G~~~~~~~~DVsd~~~v~~~~~~ 78 (338)
T PRK07109 6 LGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEGLAAEIRAAGGEALAVVADVADAEAVQAAADR 78 (338)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHH
T ss_conf 6989899948434999999999998799899998999999999999996398189998017999999999999
No 333
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=91.73 E-value=0.42 Score=27.29 Aligned_cols=35 Identities=31% Similarity=0.534 Sum_probs=30.4
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 9887-8999809898999999998879789999676
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|+++ =|.|||+|-=|...+..|.++|.+|.+++..
T Consensus 1 M~~~YDviVIG~GpaG~~AA~~aa~~G~kv~liE~~ 36 (464)
T PRK05976 1 MAKEYDLLIIGGGPGGYVAAIRAGQLGLKTALVEKG 36 (464)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 997188999997889999999999789929999789
No 334
>PRK06398 aldose dehydrogenase; Validated
Probab=91.73 E-value=1.1 Score=24.47 Aligned_cols=61 Identities=10% Similarity=0.130 Sum_probs=42.2
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771342268279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-|++ -+|+..+.+..+.|.+|+.+|.+..... -.-.++..|..|.+.+.++.+
T Consensus 4 L~gKvalVTGgs~GIG~aia~~la~~Ga~V~~~~~~~~~~~--~~~~~i~~Dvt~~~~v~~~v~ 65 (256)
T PRK06398 4 LRDKVVIVTGGSSGIGLAIVSRFVDEGSKVVSISRSEPEDI--NKSDHIKCDVTNEDEVKNAIN 65 (256)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCC--CCCCEEEECCCCHHHHHHHHH
T ss_conf 99898999687878999999999986999999948751251--722389854799999999999
No 335
>PRK07588 hypothetical protein; Provisional
Probab=91.71 E-value=0.36 Score=27.78 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=30.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 899980989899999999887978999967677
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
||.|+|+|--|..++.+.++.|++|.+++..+.
T Consensus 2 kVlIvGaGiaGLalA~~L~r~G~~v~V~Er~~~ 34 (391)
T PRK07588 2 KIAISGAGIAGATLAHWLQRTGHEPTLIERAPK 34 (391)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 799999328999999999868999899903898
No 336
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=91.69 E-value=0.75 Score=25.60 Aligned_cols=37 Identities=24% Similarity=0.329 Sum_probs=31.4
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+..+....+.|.+|+++|.+.+
T Consensus 1 L~gKvalITG~s~GIG~aia~~la~~Ga~V~i~~r~~~ 38 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNRE 38 (250)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 95199999685768999999999987999999979889
No 337
>PRK06116 glutathione reductase; Validated
Probab=91.69 E-value=0.42 Score=27.30 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=30.0
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9887-89998098989999999988797899996767
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+++ -|.|||+|-=|.-.+..|.++|.+|.+++...
T Consensus 1 Ms~~YDvvVIG~GpaG~~aA~~aa~~G~kV~liE~~~ 37 (450)
T PRK06116 1 MTKDYDLIVIGGGSGGIASANRAAMYGAKVALIEAKE 37 (450)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 9974888999988899999999996879699993799
No 338
>PRK06198 short chain dehydrogenase; Provisional
Probab=91.65 E-value=0.61 Score=26.21 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=27.8
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE-ECCC
Q ss_conf 9887899980989-8999999998879789999-6767
Q gi|254780158|r 1 MKKKTIGIIGGGQ-LARMLSMSAARLGFCTVIL-DPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~-d~~~ 36 (354)
++.|++.|-|+++ +|+..++...+.|.+++++ +.+.
T Consensus 4 L~gK~alVTGas~GIG~aiA~~la~~Ga~vv~~~~~~~ 41 (268)
T PRK06198 4 LDGKIALVTGGTQGLGAAIARLFAERGAAGLVICGRSA 41 (268)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf 89988999585778999999999987993899962988
No 339
>PRK07102 short chain dehydrogenase; Provisional
Probab=91.64 E-value=0.66 Score=25.97 Aligned_cols=34 Identities=29% Similarity=0.299 Sum_probs=29.4
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 789998098-9899999999887978999967677
Q gi|254780158|r 4 KTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 4 k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|||.|.|++ -+|+.++....+.|++|++++.+.+
T Consensus 2 K~vlITGassGIG~a~A~~la~~G~~v~l~~R~~~ 36 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDTE 36 (243)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 97999157459999999999987998999989889
No 340
>PRK08264 short chain dehydrogenase; Validated
Probab=91.64 E-value=1.1 Score=24.41 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=40.0
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEE-ECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999-67677713422682798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVIL-DPDSNCPANQVSNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~-d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~ 64 (354)
++.|++.|-|++ -+|+.++....+.|..++.. ..++.. ...-.-..+..|..|.+.+.++++.
T Consensus 3 l~gK~alITGassGIG~aiA~~la~~Ga~~V~~~~r~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~ 67 (235)
T PRK08264 3 IKGKVVLVTGANRGIGRAFVEELLARGAAKVYAAARDPES-VDLPRVVPLQLDVTDPASVAAAAEQ 67 (235)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHH-CCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 7998899926754999999999998699779997278403-5559879998068999999999997
No 341
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=91.64 E-value=0.93 Score=24.97 Aligned_cols=37 Identities=11% Similarity=0.061 Sum_probs=29.8
Q ss_pred CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 8789998098-989999999988797899996767771
Q gi|254780158|r 3 KKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 3 ~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
+|++.|-|++ -+|+.+++...+.|++|++.+.+.+..
T Consensus 2 ~KvalITGas~GIG~a~a~~la~~G~~Vv~~~~~~~~~ 39 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLADGYRVIATYFGNYDA 39 (245)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHH
T ss_conf 85999947888899999999998799899995880778
No 342
>PRK07035 short chain dehydrogenase; Provisional
Probab=91.63 E-value=0.59 Score=26.28 Aligned_cols=36 Identities=11% Similarity=0.167 Sum_probs=30.3
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098-989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+.|++.|-|++ -+|+.+++...+.|.+|++.+.+.
T Consensus 6 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~ 42 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL 42 (252)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 7899899958874999999999998799899997988
No 343
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.62 E-value=0.35 Score=27.80 Aligned_cols=109 Identities=9% Similarity=0.092 Sum_probs=56.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCHHHCCCEEEE--------CCCCCHHHHHHHHHHCCEEEECCCC
Q ss_conf 89998098989999999988797--8999967677713422682798--------7899999999997419999987722
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPANQVSNQQIA--------ARHDDIKALNTFADICDYATYESEN 74 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa~~~ad~~~~--------~~~~D~~~l~~~~~~~Dvit~E~E~ 74 (354)
+|+|||+|+.|..++..+...|+ +++.+|-+++-.-.+..|-... ..-.|.+ -.+.+|+|.....
T Consensus 2 KI~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~DL~~a~~~~~~~~i~~~~~~----~l~daDvVVitaG- 76 (308)
T cd05292 2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYA----DCKGADVVVITAG- 76 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCHH----HHCCCCEEEECCC-
T ss_conf 79999948889999999986799887999918898451256876624103688168409999----9779999998999-
Q ss_pred CCHHHHHHHHHCCCCCCCHHHH-HHHHCCHHHHHHHHHCCC--CCCCCCCCCHHHHHHH
Q ss_conf 2113334443020034876778-763152788888765058--8674321000688886
Q gi|254780158|r 75 IPEKSISYLSTLLPTYPSSRAI-EISQDRLYEKKFFQESGL--TTVDFYEINSQESLTN 130 (354)
Q Consensus 75 i~~~~l~~l~~~~~v~P~~~al-~~~~dK~~~K~~l~~~gi--pt~~~~~v~s~~el~~ 130 (354)
.+--|+..-. ....|-...|++..+..- |-+-+..++|+-|+..
T Consensus 77 ------------~~rk~g~tR~dll~~Na~I~~~i~~~i~~~~p~~ivivvsNPvDv~t 123 (308)
T cd05292 77 ------------ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLT 123 (308)
T ss_pred ------------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHH
T ss_conf ------------99998998789998889999999999984199808997279547899
No 344
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=91.58 E-value=1.1 Score=24.37 Aligned_cols=62 Identities=15% Similarity=0.128 Sum_probs=43.6
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771342268279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-|++ -+|+.+++...+.|.+|+++|.++..- ..-.-.++..|..|.+.+.++.+
T Consensus 7 L~gKvalVTGgs~GIG~aia~~la~~Ga~V~~~d~~~~~~-~~~~~~~~~~Dvt~~~~v~~~v~ 69 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVEELLAQGANVQMVDIHGGDE-KHKGYQFWPTDISSAKEVNHTVA 69 (266)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHC-CCCCEEEEECCCCCHHHHHHHHH
T ss_conf 9999799947787899999999998799999997885350-58976999816999999999999
No 345
>PRK07806 short chain dehydrogenase; Provisional
Probab=91.58 E-value=1.1 Score=24.36 Aligned_cols=63 Identities=16% Similarity=0.155 Sum_probs=46.2
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC---------CEEEECCCCCHHHHHHHHHH
Q ss_conf 88789998098-98999999998879789999676777134226---------82798789999999999741
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVS---------NQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~a---------d~~~~~~~~D~~~l~~~~~~ 64 (354)
+.|++.|-|++ -+|+..+....+.|++|++.+.+...-+..++ ...+.+|..|.+.+.++.+.
T Consensus 5 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~~~~~~~a~~~~~~i~~~g~~a~~~~~Dvtd~~~v~~l~~~ 77 (248)
T PRK07806 5 PGKIALVTGSSRGIGAEVAKYLAGAGAHVVVNYRNKAARAEKVVAEIRAAGGRASAVGADLTDEASVAALMDA 77 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 9988999378859999999999987998999838956899999999996198399997899999999999999
No 346
>PRK05866 short chain dehydrogenase; Provisional
Probab=91.58 E-value=1 Score=24.64 Aligned_cols=63 Identities=16% Similarity=0.217 Sum_probs=45.4
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHC-----CCEEEECCCCCHHHHHHHHHH
Q ss_conf 88789998098-9899999999887978999967677713---422-----682798789999999999741
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQV-----SNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~-----ad~~~~~~~~D~~~l~~~~~~ 64 (354)
+-|++.|-|++ -+|+.+++...+.|.+|++++.+.+.-. ..+ .-..+..|..|.+.+.++++.
T Consensus 39 ~GKvaLITGassGIG~aiA~~la~~Ga~Vvl~~R~~~~l~~~~~~i~~~g~~~~~~~~Dvtd~~~v~~~v~~ 110 (290)
T PRK05866 39 TGKRILLTGASSGIGEAAAEKFARRGATVVAVARRKDLLDAVADRITAAGGDAMAIPCDLSDLDAVDALVAD 110 (290)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 999899908130999999999998699899998999999999999996499089997788989999999999
No 347
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=91.58 E-value=1.1 Score=24.36 Aligned_cols=62 Identities=26% Similarity=0.345 Sum_probs=42.4
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC---CHHHCCC------EEEECCCCCHHHHHHHH
Q ss_conf 98878999809-898999999998879789999676777---1342268------27987899999999997
Q gi|254780158|r 1 MKKKTIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNC---PANQVSN------QQIAARHDDIKALNTFA 62 (354)
Q Consensus 1 M~~k~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~---pa~~~ad------~~~~~~~~D~~~l~~~~ 62 (354)
|.++++.|-|+ +-+|++++....+.|+.++.+.++.+- -+.++.+ ..+..|+.|.+.+..+.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~ 75 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLE 75 (265)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
T ss_conf 778679997788648999999999779979999676999999999998730862799977678836799999
No 348
>KOG1430 consensus
Probab=91.57 E-value=1.1 Score=24.36 Aligned_cols=65 Identities=18% Similarity=0.163 Sum_probs=43.9
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC--CEEEEEECCCCC---CHH-----HCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 98878999809-898999999998879--789999676777---134-----226827987899999999997419
Q gi|254780158|r 1 MKKKTIGIIGG-GQLARMLSMSAARLG--FCTVILDPDSNC---PAN-----QVSNQQIAARHDDIKALNTFADIC 65 (354)
Q Consensus 1 M~~k~IgIlG~-GqL~rml~~aA~~lG--~~v~v~d~~~~~---pa~-----~~ad~~~~~~~~D~~~l~~~~~~~ 65 (354)
|++.++.|+|| |-||+-++.+..+.+ .++.++|..+.- +.- .-.-.++.+|+.|...+..-...+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~ 77 (361)
T KOG1430 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA 77 (361)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHCCCC
T ss_conf 9677799989833789999999984566617999536775556514553346774368722300005566521576
No 349
>PRK07846 mycothione/glutathione reductase; Reviewed
Probab=91.56 E-value=0.41 Score=27.38 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=20.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 999809898999999998879789999676
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
+.|||+|- |- .+.+++..|.+|.+++..
T Consensus 4 viVIG~Gp-gg-~~~a~~~aG~kValVE~~ 31 (453)
T PRK07846 4 LIIIGTGS-GN-SILDERFADKRIAIVEKG 31 (453)
T ss_pred EEEECCCH-HH-HHHHHHHCCCEEEEEECC
T ss_conf 89989888-99-999999829929999789
No 350
>TIGR03025 EPS_sugtrans exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Certain closely related transferase enzymes such as Sinorhizobium ExoY and Lactococcus EpsD lack the N-terminal domain and are not found by this model.
Probab=91.54 E-value=1.2 Score=24.34 Aligned_cols=65 Identities=20% Similarity=0.276 Sum_probs=36.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHH---HCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH--CCEEE
Q ss_conf 8878999809898999999998---87978999967677713422682798789999999999741--99999
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAA---RLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI--CDYAT 69 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~---~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~--~Dvit 69 (354)
..+++.|+|+|+.+.+++.+.+ .+|++++.+-.++..........-+.+ +.+.+.++++. .|-|.
T Consensus 124 ~~rrvlIIG~g~~~~~l~~~l~~~~~~g~~vvG~~dd~~~~~~~~~~~p~lg---~~~~l~~~i~~~~ideVi 193 (445)
T TIGR03025 124 NLRRVLIVGTGELAEELAAALSRNPDLGYRVVGFVDDRPEDRVEVAGLPVLG---KLDDLVELVRAHRVDEVI 193 (445)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCC---CHHHHHHHHHHCCCCEEE
T ss_conf 7723999908489999999998284688489999778754445567886018---899999999976998899
No 351
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=91.48 E-value=0.97 Score=24.84 Aligned_cols=36 Identities=17% Similarity=0.176 Sum_probs=29.3
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098-989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
++.|++.|-|++ -+|+.++++..+.|++|+..+...
T Consensus 8 L~gK~alITGas~GIG~aia~~la~~Ga~Vv~~~~~~ 44 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE 44 (253)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 9999899938876899999999998799999955877
No 352
>PRK09242 tropinone reductase; Provisional
Probab=91.47 E-value=0.68 Score=25.90 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=30.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-||+ -+|+.++....+.|.+|++++.+.+
T Consensus 8 L~gK~alITGgs~GIG~a~a~~la~~Ga~V~~~~r~~~ 45 (258)
T PRK09242 8 LDGQTALITGASKGIGLAIARELLGLGADVLIVARDAD 45 (258)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 79999999484868999999999987998999969889
No 353
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=91.45 E-value=0.74 Score=25.67 Aligned_cols=126 Identities=14% Similarity=0.049 Sum_probs=72.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE--EEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH--CCEEEECCCCCCHH
Q ss_conf 87899980989899999999887978--999967677713422682798789999999999741--99999877222113
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFC--TVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI--CDYATYESENIPEK 78 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~--v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~--~Dvit~E~E~i~~~ 78 (354)
..+|+||||--=||.++.....++.. ++.+..+...|+.+.+. ...+-+.+.+.+.+|.+. .|.++ |..
T Consensus 2 ~~~ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~-~~~~G~l~~e~l~~~l~e~~i~llI------DAT 74 (257)
T COG2099 2 MMRILLLGGTSDARALAKKLAAAPVDIILSSLTGYGAKLAEQIGP-VRVGGFLGAEGLAAFLREEGIDLLI------DAT 74 (257)
T ss_pred CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHCCCC-EEECCCCCHHHHHHHHHHCCCCEEE------ECC
T ss_conf 835999826389999999862068617999703444241110588-6652768878999999974988899------788
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 3344430200348767787631527888887650588--67432100068888641001312554
Q gi|254780158|r 79 SISYLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLT--TVDFYEINSQESLTNILGGFKGKGIL 141 (354)
Q Consensus 79 ~l~~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gip--t~~~~~v~s~~el~~~~~~~g~P~vl 141 (354)
- - +-..-|.++++.|+....---.|+.-+.. -.+|..+.+.+|+.+++.+.+--+.+
T Consensus 75 H--P----yAa~iS~Na~~aake~gipy~r~eRP~~~~~gd~~~~V~d~~ea~~~~~~~~~rVfl 133 (257)
T COG2099 75 H--P----YAARISQNAARAAKETGIPYLRLERPPWAPNGDNWIEVADIEEAAEAAKQLGRRVFL 133 (257)
T ss_pred C--H----HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEE
T ss_conf 7--5----799998999999998599679987775545799669845899999987504773799
No 354
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=91.45 E-value=0.98 Score=24.83 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=28.3
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 988789998098-98999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~ 35 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.+..
T Consensus 6 L~gK~alVTGgs~GIG~aia~~la~~Ga~V~i~~~~ 41 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS 41 (260)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 899989996734099999999999879999998599
No 355
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=91.41 E-value=0.47 Score=26.95 Aligned_cols=29 Identities=17% Similarity=0.083 Sum_probs=20.8
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9998098989999999988797899996767
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
+.|||+|-=| .+.+++..|.+|.+++.+.
T Consensus 5 viVIGaGpgG--~~~a~~~ag~kValvEk~~ 33 (452)
T TIGR03452 5 LIIIGTGSGN--SIPDPRFADKRIAIVEKGT 33 (452)
T ss_pred EEEECCCHHH--HHHHHHHCCCEEEEEECCC
T ss_conf 8999986899--9999998299099997899
No 356
>PRK05867 short chain dehydrogenase; Provisional
Probab=91.35 E-value=0.94 Score=24.94 Aligned_cols=37 Identities=14% Similarity=0.203 Sum_probs=30.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.+.+.+
T Consensus 7 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~ 44 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLD 44 (253)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89998999795659999999999986999999979889
No 357
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=91.35 E-value=1.2 Score=24.21 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=30.4
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+.|++.|-|++ -+|+.++.+..+.|.+|++.|.+++
T Consensus 8 ~gK~alVTG~~~GIG~aiA~~la~~Ga~Vvi~~~~~~ 44 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAE 44 (254)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 9998999685678999999999986999999969889
No 358
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=91.33 E-value=0.86 Score=25.21 Aligned_cols=37 Identities=14% Similarity=0.219 Sum_probs=30.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|.||+ -+|+.++.+..+.|++|++.+.++.
T Consensus 4 L~gK~alITGgs~GIG~aia~~la~~G~~V~~~~r~~~ 41 (253)
T PRK12826 4 LMGRVALVTGAARGIGRAIAVRFAADGADVIVVDICGQ 41 (253)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89988999489778999999999987998999989889
No 359
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.29 E-value=0.63 Score=26.13 Aligned_cols=89 Identities=13% Similarity=0.076 Sum_probs=52.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH-C-----CCEEEECCCCCHHHHHHHHHHCCEEEECCCCC
Q ss_conf 88789998098989999999988797899996767771342-2-----68279878999999999974199999877222
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQ-V-----SNQQIAARHDDIKALNTFADICDYATYESENI 75 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~-~-----ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i 75 (354)
..|+|+|+|-|-.|+-.+....+.|++|.+.|.++.++... + .-.++.+...+ .....+|+|++- ..|
T Consensus 4 ~~k~v~viGlG~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~~~~~i~~~~g~~~~-----~~~~~~d~vV~S-PgI 77 (445)
T PRK04308 4 QNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKAERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALS-PGI 77 (445)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCEEEECCCHH-----HHCCCCCEEEEC-CCC
T ss_conf 99989999989999999999997899199997999953189997436996899378636-----501599999989-953
Q ss_pred CHH--HHHH-HHHCCCCCCCHHHH
Q ss_conf 113--3344-43020034876778
Q gi|254780158|r 76 PEK--SISY-LSTLLPTYPSSRAI 96 (354)
Q Consensus 76 ~~~--~l~~-l~~~~~v~P~~~al 96 (354)
+.+ .+.. .+.++++.-..+.+
T Consensus 78 ~~~~p~l~~a~~~gi~i~~~~el~ 101 (445)
T PRK04308 78 SERQPDIEAFKQNGGRVLGDIELL 101 (445)
T ss_pred CCCCHHHHHHHHCCCCEECHHHHH
T ss_conf 899999999997599571599999
No 360
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=91.27 E-value=1.2 Score=24.16 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=29.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCC
Q ss_conf 89998098989999999988797-899996767771
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGF-CTVILDPDSNCP 39 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~~p 39 (354)
||+|+|.|-+|-.++....++|+ ++.++|++.=.+
T Consensus 1 kVlivG~GglG~~va~~L~~~Gv~~i~ivD~D~v~~ 36 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVEL 36 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 999999798999999999993797199997898750
No 361
>PRK07074 short chain dehydrogenase; Provisional
Probab=91.26 E-value=0.82 Score=25.35 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=30.2
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 88789998098-989999999988797899996767
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+|++.|-|++ -+|+.++++..+.|..|+++|.+.
T Consensus 1 TnKvalITGgs~GIG~aia~~la~~Ga~V~~~~r~~ 36 (256)
T PRK07074 1 TSRTALVTGAAGGIGQALARRFLAAGDRVLALDIDR 36 (256)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 998899988468999999999998699999997988
No 362
>PRK07774 short chain dehydrogenase; Provisional
Probab=91.24 E-value=0.81 Score=25.40 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=30.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-||+ -+|+.+++...+.|.+|++.|.+.+
T Consensus 4 L~gK~alVTGgs~GiG~aia~~la~~Ga~V~i~~~~~~ 41 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAE 41 (250)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 79988999797688999999999986999999979889
No 363
>PRK08339 short chain dehydrogenase; Provisional
Probab=91.24 E-value=1.2 Score=24.14 Aligned_cols=37 Identities=16% Similarity=0.123 Sum_probs=30.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|+.|++.|-|++ -+|+..++...+.|.+|++++.+++
T Consensus 6 L~gK~alITG~s~GIG~aiA~~la~~Ga~V~i~~r~~~ 43 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVIILSRNEE 43 (263)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89998999162609999999999986999999979889
No 364
>PRK09186 flagellin modification protein A; Provisional
Probab=91.23 E-value=0.97 Score=24.85 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=30.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.+++...+.|..|++.|.+.+
T Consensus 2 L~gK~~lVTGgs~GIG~aia~~la~~Ga~V~~~~~~~~ 39 (255)
T PRK09186 2 LEGKTILITGAGGLIGSALVKAILEAGGIVIAADINKE 39 (255)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89598999795868999999999987999999969889
No 365
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=91.20 E-value=1.2 Score=24.11 Aligned_cols=63 Identities=19% Similarity=0.172 Sum_probs=42.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH--CCEE
Q ss_conf 7899980989899999999887978999967677713422682798789999999999741--9999
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI--CDYA 68 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~--~Dvi 68 (354)
++|+||||=.=||.++....+.++-+.+.. ....|..... ....+.+.|.+.+.+|.+. +++|
T Consensus 2 ~~IlilgGT~Egr~la~~L~~~~~~~s~ag-~~~~~~~~~~-~i~~G~~~~~~~l~~~l~~~~i~~V 66 (241)
T PRK08057 2 PRILLLGGTSEARALARALAPDDTVTSLAG-RTLKPADLPG-PVRVGGFGGAEGLAAYLREEGIDLV 66 (241)
T ss_pred CEEEEEECHHHHHHHHHHHHCCCEEEEEEE-ECCCCCCCCC-CEEECCCCCHHHHHHHHHHCCCCEE
T ss_conf 659999670899999999748998999853-0255656887-6798888999999999996799899
No 366
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=91.18 E-value=0.78 Score=25.50 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=30.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8999809898999999998879789999676777
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
+||+||=|..|.-|+.-..+-|++|.++|.++..
T Consensus 2 kIGfIGLG~MG~~mA~nL~~~G~~V~v~d~~~~~ 35 (298)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEA 35 (298)
T ss_pred EEEEECHHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 7999834676899999999779948998499899
No 367
>PRK07326 short chain dehydrogenase; Provisional
Probab=91.16 E-value=0.81 Score=25.40 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=44.9
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---HCC---CEEEECCCCCHHHHHHHHHH
Q ss_conf 88789998098-98999999998879789999676777134---226---82798789999999999741
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---QVS---NQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~a---d~~~~~~~~D~~~l~~~~~~ 64 (354)
+.|++.|-|++ -+|+.++....+.|++|++.+.+.+.-.. .+. -..+..|..|.+.+.++.+.
T Consensus 4 ~GKvalITGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~~Dv~d~~~v~~~v~~ 73 (235)
T PRK07326 4 NGKAALVTGGSKGIGFAVAEALAAAGYRVAICARDESELEAAAQELGKRNVLGLACDVRDEADVRQAVDA 73 (235)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 9989999382679999999999987999999989889999999984239869999638999999999999
No 368
>PRK07454 short chain dehydrogenase; Provisional
Probab=91.15 E-value=1.3 Score=24.08 Aligned_cols=62 Identities=10% Similarity=0.153 Sum_probs=40.8
Q ss_pred CC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC---------CEEEECCCCCHHHHHHHHH
Q ss_conf 98-8789998098-98999999998879789999676777134226---------8279878999999999974
Q gi|254780158|r 1 MK-KKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVS---------NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~-~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~a---------d~~~~~~~~D~~~l~~~~~ 63 (354)
|+ .|++.|-|++ -+|+.++....+.|++|++++.+.+.- .+++ -..+..|..|.+.+.++++
T Consensus 3 ~~~mKvalITGas~GIG~a~A~~la~~G~~V~l~~R~~~~l-~~~~~e~~~~g~~~~~~~~Dvt~~~~v~~~~~ 75 (241)
T PRK07454 3 LNSMPTALITGASRGIGKATALAFAKAGWDLALVARSQDAL-EALAEELRSTGVKVAAYSIDLSNPEAIAPGIA 75 (241)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 89998899917587899999999998799899998999999-99999999659928999951899999999999
No 369
>KOG1198 consensus
Probab=91.14 E-value=1.3 Score=24.08 Aligned_cols=66 Identities=14% Similarity=0.115 Sum_probs=44.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHH----HCCEE
Q ss_conf 878999809-898999999998879-7899996767771342268279878999999999974----19999
Q gi|254780158|r 3 KKTIGIIGG-GQLARMLSMSAARLG-FCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFAD----ICDYA 68 (354)
Q Consensus 3 ~k~IgIlG~-GqL~rml~~aA~~lG-~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~----~~Dvi 68 (354)
.+.|+++|+ |..|...++=|+..| ..|++..+...-...+.-+.-.+.+|+|.+..+...+ ..|+|
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvV 229 (347)
T KOG1198 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVV 229 (347)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
T ss_conf 986999938748999999999874974799981554168999729965124885779999876227885099
No 370
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.13 E-value=0.91 Score=25.05 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=27.0
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEE
Q ss_conf 88789998098-989999999988797899996
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILD 33 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d 33 (354)
+.|++.|.||+ -+|+.++....+.|++|++..
T Consensus 4 ~gK~vlITGgs~GIG~aia~~la~~G~~V~~~~ 36 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAY 36 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 998899937845899999999998799899981
No 371
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=91.13 E-value=0.64 Score=26.06 Aligned_cols=120 Identities=15% Similarity=0.171 Sum_probs=59.2
Q ss_pred CEEEEECCCHHHHHHHHHHHH--CCCEEE-EEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE--CCCCCCHH
Q ss_conf 789998098989999999988--797899-9967677713422682798789999999999741999998--77222113
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAAR--LGFCTV-ILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY--ESENIPEK 78 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~--lG~~v~-v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~--E~E~i~~~ 78 (354)
.||||||.|-+|+.++.+..+ .+++.. +++++.+. +..++...-.-...+ +.++.++||+|.= -.+.+...
T Consensus 2 ~rVgiIG~GaIG~~Va~~l~~g~~~~~L~~V~~r~~~~-a~~~a~~~~~~~~~~---ld~l~~~~DlVVE~A~~~av~~~ 77 (265)
T PRK13304 2 LKIGIVGCGAIANLITKAIDSGRINAELLAFYDRNLEK-AENLAEKTGAPACLS---IDELVKDVDLVVECASQKAVEDT 77 (265)
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCHHH-HHHHHHCCCCCCCCC---HHHHHHCCCEEEECCCHHHHHHH
T ss_conf 49999865789999999986799864999997898789-887764159971279---89983389999989898999999
Q ss_pred HHHHHHHCCCCC-CCHHHHHHHHCCHHH---HHHHHHCC--CCCCCCCCCCHHHHHHHH
Q ss_conf 334443020034-876778763152788---88876505--886743210006888864
Q gi|254780158|r 79 SISYLSTLLPTY-PSSRAIEISQDRLYE---KKFFQESG--LTTVDFYEINSQESLTNI 131 (354)
Q Consensus 79 ~l~~l~~~~~v~-P~~~al~~~~dK~~~---K~~l~~~g--ipt~~~~~v~s~~el~~~ 131 (354)
....|+.+..+. -|..++. |..+. ++..++.| +-.| ...+-.+|-+..+
T Consensus 78 ~~~~L~~G~dlvv~SvGALa---D~~l~~~L~~~A~~~g~~i~ip-sGAigGlD~l~aa 132 (265)
T PRK13304 78 VPKSLNNGKDVIIMSVGALA---DKELFLKLYKLAKENGCKIYLP-SGAIAGIDGIKAA 132 (265)
T ss_pred HHHHHHCCCCEEEECHHHHC---CHHHHHHHHHHHHHCCCEEEEC-CCHHHHHHHHHHH
T ss_conf 99999759989998136855---9899999999997379779982-6134427889998
No 372
>PRK09135 pteridine reductase; Provisional
Probab=91.12 E-value=1.2 Score=24.18 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=38.1
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHC--------CC--EEEECCCCCHHHHHHHHH
Q ss_conf 88789998098-9899999999887978999967677713422--------68--279878999999999974
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQV--------SN--QQIAARHDDIKALNTFAD 63 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~--------ad--~~~~~~~~D~~~l~~~~~ 63 (354)
+.|++.|-|++ -+|+.++.+..+.|.+|++.+.+...-+..+ .+ ..+.+|..|.+.+.++.+
T Consensus 5 sgKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~ 77 (249)
T PRK09135 5 SSKVALITGGARRIGAAIARTLHAAGYRVAVHYHRSAAEADALAAELNRLRPGSAAALQADLLDPDALEQLVA 77 (249)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 9988999688758999999999987998999818987999999999985059818999816999999999999
No 373
>PRK06940 short chain dehydrogenase; Provisional
Probab=91.11 E-value=1.3 Score=24.06 Aligned_cols=62 Identities=13% Similarity=0.231 Sum_probs=37.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH---HHCC-----CEEEECCCCCHHHHHHHHH
Q ss_conf 9887899980989899999999887978999967677713---4226-----8279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA---NQVS-----NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~a-----d~~~~~~~~D~~~l~~~~~ 63 (354)
|++|.+-+=|+|-+|+.+++... .|.+|++.|.+++... ..+. -..+.+|..|.+.+.++++
T Consensus 3 L~~kV~v~tGa~GIG~aiA~~la-~Ga~vvi~~~~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~l~~ 72 (277)
T PRK06940 3 MSKEVVVVIGAGGMGQAIARRVG-SGKTVLLADYNEENLQAVARTLREAGFDVITQQVDVSSRESVKALAQ 72 (277)
T ss_pred CCCCEEEECCCCHHHHHHHHHHH-HCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 89929999781699999999998-19989999898899999999987228829999825799899999999
No 374
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=91.11 E-value=1.1 Score=24.46 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=28.1
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 88789998098-98999999998879789999676
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~ 35 (354)
+.|++.|-|++ -+|+.++.+..+-|.+|+.++.+
T Consensus 7 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~~~ 41 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 99989994867689999999999869999997898
No 375
>PRK07478 short chain dehydrogenase; Provisional
Probab=91.10 E-value=0.88 Score=25.14 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=30.6
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.+.+.+
T Consensus 4 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~ 41 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQA 41 (254)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89987999588768999999999987999999979889
No 376
>PRK05650 short chain dehydrogenase; Provisional
Probab=91.08 E-value=1.3 Score=24.05 Aligned_cols=60 Identities=18% Similarity=0.266 Sum_probs=43.4
Q ss_pred EEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHC----CC-EEEECCCCCHHHHHHHHHH
Q ss_conf 89998098-9899999999887978999967677713---422----68-2798789999999999741
Q gi|254780158|r 5 TIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQV----SN-QQIAARHDDIKALNTFADI 64 (354)
Q Consensus 5 ~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~----ad-~~~~~~~~D~~~l~~~~~~ 64 (354)
||.|-|++ -+|+.++....+.|++|++.|.+.+.-. ..+ .+ .++..|..|.+.+.++++.
T Consensus 2 rVlITGassGIG~alA~~la~~G~~V~l~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~~~~~~~~ 70 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKELREAGGDGFYQRCDVRDYSQLTALAQA 70 (270)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 799988764999999999998899899997988999999999984499289998458999999999999
No 377
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated
Probab=91.08 E-value=0.6 Score=26.27 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=29.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 89998098989999999988797899996767
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
.|+|+|+|--|.+++....+.|+++++++..+
T Consensus 4 ~V~IVGaGP~GL~LA~lLar~GI~~vVlEr~~ 35 (392)
T PRK08243 4 QVAIIGAGPAGLLLGQLLHLAGIDSVVLERRS 35 (392)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 89999977999999999997799889997689
No 378
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=91.05 E-value=0.52 Score=26.67 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=30.7
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9887-89998098989999999988797899996767
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+++ =|.|||+|-=|...+..|.++|.+|.+++...
T Consensus 1 Ms~~YDviVIG~GpAG~~AA~~aa~~G~kValiE~~~ 37 (475)
T PRK06327 1 MSKQFDVVVIGAGPGGYVAAIRAAQLGLKVACIEAWK 37 (475)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf 9961889999988899999999997899199997257
No 379
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=91.05 E-value=0.56 Score=26.48 Aligned_cols=121 Identities=14% Similarity=0.163 Sum_probs=54.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEE-EEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE--CCCCCCHHH
Q ss_conf 78999809898999999998879-7899-9967677713422682798789999999999741999998--772221133
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLG-FCTV-ILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY--ESENIPEKS 79 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG-~~v~-v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~--E~E~i~~~~ 79 (354)
.||||||.|-+|+.++.+.++-. +++. ++.+++.....+.. ...+..-...+.++.+++|+|.= -.+.+....
T Consensus 2 mrVgiiG~GaIG~~va~~l~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~L~~~~DlVVE~A~~~av~~~~ 78 (265)
T PRK13303 2 MKVAMIGFGAIAAAVYELLEHDPRLRVDWVIVPEHSVDAVRRA---LGRAVQVVSSVDALAQRPDLVVECAGHAALKEHV 78 (265)
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH---HCCCCCCCCCHHHHHHCCCEEEECCCHHHHHHHH
T ss_conf 2999985468999999998449972799999468526778753---0458864479889823799999898889999999
Q ss_pred HHHHHHCCCCC-CCHHHHHHHHCCHHHHHHHH---HCCCC-CCCCCCCCHHHHHHH
Q ss_conf 34443020034-87677876315278888876---50588-674321000688886
Q gi|254780158|r 80 ISYLSTLLPTY-PSSRAIEISQDRLYEKKFFQ---ESGLT-TVDFYEINSQESLTN 130 (354)
Q Consensus 80 l~~l~~~~~v~-P~~~al~~~~dK~~~K~~l~---~~gip-t~~~~~v~s~~el~~ 130 (354)
...|+.+..+. -|..++ .|+.+..++.+ +.|-. ..|...+-.+|-+..
T Consensus 79 ~~~L~~g~dl~v~SvgAL---aD~~~~~~l~~~A~~~~~~i~ipsGAigGlD~l~a 131 (265)
T PRK13303 79 VPILKAGIDCAVASVGAL---ADEALRERLEQAAEAGGARLHLLSGAIGGIDALAA 131 (265)
T ss_pred HHHHHCCCCEEEECCHHH---CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
T ss_conf 999972998899881585---79889999999998689759972623440679999
No 380
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=91.05 E-value=0.51 Score=26.75 Aligned_cols=62 Identities=24% Similarity=0.339 Sum_probs=37.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCCCHHHCCCEE-EECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 78999809898999999998879---789999676777134226827-98789999999999741999998
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLG---FCTVILDPDSNCPANQVSNQQ-IAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG---~~v~v~d~~~~~pa~~~ad~~-~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
++||+||+|.+|..++....+-| .++.+++++++.. ..+...+ +.. ..| ..+.++.||+|..
T Consensus 3 ~kI~~IG~G~Mg~Aii~gl~~~~~~~~~i~v~~r~~~~~-~~l~~~~~v~~-~~~---~~~~~~~~diIiL 68 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKR-AALAEEYGVRA-ATD---NQEAAQEADVVVL 68 (267)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHH-HHHHHHHCCEE-ECC---HHHHHHCCCEEEE
T ss_conf 879998668999999999997798945289977999999-99999739678-578---6988721999999
No 381
>PRK06227 consensus
Probab=91.01 E-value=0.87 Score=25.19 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=30.5
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++....+.|.+|++.|.+++
T Consensus 3 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~~~~~ 40 (256)
T PRK06227 3 LSGKVAIVTGGGQGIGAAIAQTFAENGAKVVIADIDEE 40 (256)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 99988999586688999999999987999999969888
No 382
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=90.99 E-value=1.1 Score=24.62 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=31.1
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++....+.|++|++.+.+.+
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~ 39 (258)
T PRK12429 2 LKGKTALVTGAASGIGLEIALALAKEGAKVVIADLNDE 39 (258)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89598999488758999999999987999999979889
No 383
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=90.96 E-value=1.3 Score=23.97 Aligned_cols=32 Identities=22% Similarity=0.196 Sum_probs=19.5
Q ss_pred CCCEEEE-ECCCHH---HHHHHHHHHHCCCEEEEEE
Q ss_conf 8878999-809898---9999999988797899996
Q gi|254780158|r 2 KKKTIGI-IGGGQL---ARMLSMSAARLGFCTVILD 33 (354)
Q Consensus 2 ~~k~IgI-lG~GqL---~rml~~aA~~lG~~v~v~d 33 (354)
+.|+|++ +.||-- +..++...++.|++|.|+=
T Consensus 3 ~gK~IllgVtGsIAayK~~~L~r~L~k~G~~V~vvm 38 (392)
T PRK05579 3 AGKRIVLGVSGGIAAYKALELVRRLRKAGADVRVVM 38 (392)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 999899998337999999999999987899899998
No 384
>PRK07479 consensus
Probab=90.94 E-value=0.86 Score=25.22 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=30.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++....+.|++|++.+.+++
T Consensus 3 L~gK~alITGgs~GIG~a~a~~la~~G~~V~i~~~~~~ 40 (252)
T PRK07479 3 LSGKVAIVTGAGSGFGEGIAKRFAREGAKVVVADLNAA 40 (252)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 79988999388768999999999987999999979899
No 385
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=90.94 E-value=1 Score=24.63 Aligned_cols=36 Identities=22% Similarity=0.299 Sum_probs=28.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEECCCC
Q ss_conf 887899980989899999999887978-999967677
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFC-TVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~-v~v~d~~~~ 37 (354)
.+-+|+|+|.|-||.+.+......|+. +.++|.+.=
T Consensus 18 ~~s~VlVvG~GGLG~~v~~~La~aGVg~i~ivD~D~V 54 (198)
T cd01485 18 RSAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHRLV 54 (198)
T ss_pred HHCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 7098999877889999999999749986999959963
No 386
>PTZ00318 NADH dehydrogenase; Provisional
Probab=90.93 E-value=0.41 Score=27.38 Aligned_cols=37 Identities=11% Similarity=0.097 Sum_probs=30.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|.|+||-|||||-=|..++....+-.++|.++||++.
T Consensus 8 ~~KprVVIlGgGfaGl~~ak~L~~~~~~VtLVdp~ny 44 (514)
T PTZ00318 8 LLKPNVVVVGTGWAGCYFARHLNPKLANLHVLSTRNH 44 (514)
T ss_pred CCCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCC
T ss_conf 7888589999769999999973868982899999998
No 387
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=90.93 E-value=0.54 Score=26.54 Aligned_cols=31 Identities=26% Similarity=0.476 Sum_probs=27.0
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9998098989999999988797899996767
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|.|||+|-=|...+..|.++|.+|.+++...
T Consensus 7 viVIG~GpaG~~aA~~aa~~G~kV~liE~~~ 37 (462)
T PRK06416 7 VIVIGAGPGGYVAAIRAAQLGLKVAIVEKEK 37 (462)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 8999988899999999996899399996799
No 388
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=90.90 E-value=0.6 Score=26.24 Aligned_cols=33 Identities=36% Similarity=0.538 Sum_probs=29.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 98878999809898999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|++ |.|||+|-=|...+..|.++|.+|.+++.+
T Consensus 1 M~d--viVIG~GpaG~~AA~~aa~~G~kV~lIE~~ 33 (467)
T PRK07845 1 MTR--IVIIGGGPGGYEAALVAAQLGADVTVIERD 33 (467)
T ss_pred CCC--EEEECCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 981--999874889999999999787959999679
No 389
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=90.90 E-value=1.2 Score=24.13 Aligned_cols=62 Identities=13% Similarity=0.155 Sum_probs=40.9
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---HCCC--EEEECCCCCHHHHHHHHH
Q ss_conf 88789998098-98999999998879789999676777134---2268--279878999999999974
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---QVSN--QQIAARHDDIKALNTFAD 63 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~ad--~~~~~~~~D~~~l~~~~~ 63 (354)
+.|++.|-||+ -+|+.++++..+.|.+|+++|.+.+.-.. ...+ ..+..|..|.+.+.++.+
T Consensus 4 ~gKvalITGgs~GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~~~~~v~ 71 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVA 71 (262)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 99889990678789999999999879999999899899999998679967999845799999999999
No 390
>PRK07775 short chain dehydrogenase; Provisional
Probab=90.88 E-value=0.6 Score=26.24 Aligned_cols=62 Identities=10% Similarity=0.177 Sum_probs=42.7
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC---------EEEECCCCCHHHHHHHHHH
Q ss_conf 88789998098-989999999988797899996767771342268---------2798789999999999741
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSN---------QQIAARHDDIKALNTFADI 64 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad---------~~~~~~~~D~~~l~~~~~~ 64 (354)
++|+..|-|++ -+|+.++....+.|++|++.+.+.+. ...+++ ..+..|..|.+.+.++++.
T Consensus 9 ~~KtAlVTGAssGIG~aiA~~la~~G~~V~l~~R~~e~-l~~~~~~l~~~g~~~~~~~~Dvtd~~~v~~~v~~ 80 (275)
T PRK07775 9 ARRPAIVAGASSGIGAATAIELAAHGFPVALGARRVEK-CEEIVDKIRADGGEAVAFPLDVTDPDSVKSFVAQ 80 (275)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 99979994623599999999999879989999898999-9999999996499489999128999999999999
No 391
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=90.87 E-value=0.44 Score=27.19 Aligned_cols=28 Identities=21% Similarity=0.320 Sum_probs=17.3
Q ss_pred CCCEEEEECCC---HHHH-HHHHHHHHCCCEE
Q ss_conf 88789998098---9899-9999998879789
Q gi|254780158|r 2 KKKTIGIIGGG---QLAR-MLSMSAARLGFCT 29 (354)
Q Consensus 2 ~~k~IgIlG~G---qL~r-ml~~aA~~lG~~v 29 (354)
+-|..|+||.. -++- |.-.+.+.+|+..
T Consensus 4 ~tk~~gliG~pi~hS~SP~ihn~~f~~~gl~~ 35 (275)
T PRK00258 4 KTDLYAVIGNPIAHSKSPFIHNAAAKQLGLDG 35 (275)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 76289998888241307999999999869993
No 392
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated
Probab=90.86 E-value=0.59 Score=26.33 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=28.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 89998098989999999988797899996767
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
+|.|||+|-=|...+..|.++|.+|.+++...
T Consensus 2 ~vvVIG~GpaG~~aA~~aa~~G~kV~lIEk~~ 33 (458)
T PRK06912 2 KLVIIGGGPAGYVAAITAAQNGKEVTLIDEAD 33 (458)
T ss_pred EEEEEEECHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 49999008899999999997859599995899
No 393
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=90.84 E-value=0.55 Score=26.54 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=30.6
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 9887-8999809898999999998879789999676
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|..+ -|-|||||-=|...+..|.++|.+|.+++..
T Consensus 1 M~~~yDvvVIGgGpaG~~aA~~aa~~G~kV~liE~~ 36 (472)
T PRK06467 1 MEIKTQVVVLGAGPAGYSAAFRAADLGLETVCVERY 36 (472)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 997787899998889999999999789969999637
No 394
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=90.81 E-value=0.57 Score=26.40 Aligned_cols=34 Identities=29% Similarity=0.426 Sum_probs=30.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 9887899980989899999999887978999967
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDP 34 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~ 34 (354)
|.+==|.|||+|-=|...+..|.++|.+|.++++
T Consensus 1 M~~YDviVIG~GpaG~~aA~~aa~~G~kValIE~ 34 (466)
T PRK06115 1 MKSYDVVIIGGGPGGYNAAIRAGQLGLKVACVEG 34 (466)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9846989999788999999999978993999967
No 395
>PRK07538 hypothetical protein; Provisional
Probab=90.70 E-value=0.5 Score=26.78 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=30.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 899980989899999999887978999967677
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+|.|+|+|--|..++.+.++.|++|.+++..+.
T Consensus 2 ~V~IvGaG~aGL~lA~~L~~~Gi~v~V~E~~~~ 34 (413)
T PRK07538 2 KVLIAGGGIGGLTLALTLHQRGIEVEVFEAAPE 34 (413)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 899999058999999999978999899936998
No 396
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.69 E-value=1 Score=24.72 Aligned_cols=64 Identities=17% Similarity=0.222 Sum_probs=45.4
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---H---C--CCEEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134---2---2--682798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---Q---V--SNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~---~--ad~~~~~~~~D~~~l~~~~~~ 64 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++++.+.+.-.. . . -...+..|..|.+.+.++.+.
T Consensus 4 L~gKvalITGas~GIG~aiA~~la~~Ga~V~l~~r~~~~l~~~~~~i~~~g~~~~~~~~Dvtd~~~v~~~v~~ 76 (238)
T PRK07666 4 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARSEENLKAVAKEVEAEGVKAVIATADVSDYEEVTTAIET 76 (238)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 9999899916377899999999998799899998999999999999995599279999307999999999999
No 397
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=90.68 E-value=0.61 Score=26.21 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=30.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|.+==|.|||||.=|.-.+..|.++|.+|.+++.++
T Consensus 1 M~~YDvvVIG~GpaG~~aA~~aa~~G~~V~liE~~~ 36 (460)
T PRK06292 1 MEKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGP 36 (460)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 981698999977899999999996979099995899
No 398
>PRK05693 short chain dehydrogenase; Provisional
Probab=90.68 E-value=1.4 Score=23.79 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=37.3
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH--HCCCEEEECCCCCHHHHHHHH
Q ss_conf 789998098-98999999998879789999676777134--226827987899999999997
Q gi|254780158|r 4 KTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN--QVSNQQIAARHDDIKALNTFA 62 (354)
Q Consensus 4 k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~--~~ad~~~~~~~~D~~~l~~~~ 62 (354)
|++.|-|++ -+|+.+++...+.|++|+..+.+.+.... .-.-..+..|.+|.+.+.+++
T Consensus 2 KvvlITGassGIG~alA~~la~~G~~V~~~~R~~~~l~~l~~~~~~~~~~Dvtd~~~i~~~~ 63 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLA 63 (274)
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEEECCCHHHHHHHH
T ss_conf 98999488858999999999987999999979999999998489918998469989999999
No 399
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=90.66 E-value=0.59 Score=26.30 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=27.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 789998098989999999988797899996767
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
-.+-|||+|.=|.-.+..|.++|.++.+++...
T Consensus 5 yDvvVIG~GpaG~~aA~raa~~G~kvalvE~~~ 37 (454)
T COG1249 5 YDVVVIGAGPAGYVAAIRAAQLGLKVALVEKGE 37 (454)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 548998977779999999996799779993069
No 400
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=90.65 E-value=1.1 Score=24.44 Aligned_cols=36 Identities=22% Similarity=0.188 Sum_probs=30.3
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+.|++.|-|++ -+|+.+++...+.|.+|++.|.+.+
T Consensus 9 ~gK~alVTG~s~GIG~aiA~~la~~Ga~Vii~~~~~~ 45 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAEAGATIVFNDIKQE 45 (265)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 9998999585768999999999986999999959989
No 401
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.62 E-value=0.72 Score=25.74 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=30.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 88789998098989999999988797899996767
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
..|+|+|+|-|..|+-.+..+.+.|++|.+.|..+
T Consensus 8 ~~k~i~viGlG~sG~s~a~~L~~~G~~V~~~D~~~ 42 (450)
T PRK02472 8 QNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKP 42 (450)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 89989999778999999999998869899984886
No 402
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=90.62 E-value=0.64 Score=26.07 Aligned_cols=35 Identities=23% Similarity=0.419 Sum_probs=29.3
Q ss_pred CCCCE--EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 98878--999809898999999998879789999676
Q gi|254780158|r 1 MKKKT--IGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~--IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|+++. |.|||||-=|.+-+.+|.+.|.+|++++..
T Consensus 8 ~~~~~~DVlVIGsG~AGl~AA~~a~~~G~~V~li~K~ 44 (591)
T PRK07057 8 LPRRKFDVVIVGAGGSGMRASLQLARAGLSVAVLSKV 44 (591)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 8744778899996699999999998769958999788
No 403
>pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
Probab=90.61 E-value=0.49 Score=26.83 Aligned_cols=33 Identities=30% Similarity=0.537 Sum_probs=29.9
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 999809898999999998879789999676777
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|.|+|+|--|..++.+.++.|++|.+++..+..
T Consensus 4 V~IvGaG~aGl~lA~~L~~~Gi~v~V~Er~~~~ 36 (349)
T pfam01494 4 VLIVGGGPAGLMLALLLARAGVRVVLVERHATT 36 (349)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 899992889999999998779989999289998
No 404
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit. Members of this protein family are YgfK, predicted to be one subunit of a three-subunit, molybdopterin-containing selenate reductase. This enzyme is found, typically, in genomic regions associated with xanthine dehydrogenase homologs predicted to belong to the selenium-dependent molybdenum hydroxylases (SDMH). Therefore, the selenate reductase is suggested to play a role in furnishing selenide for SelD, the selenophosphate synthase.
Probab=90.60 E-value=0.69 Score=25.84 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=31.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf 887899980989899999999887978999967677713
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA 40 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa 40 (354)
++|+|.|||||--|.--|.-..++|++|.|++..+..-+
T Consensus 536 ~gkKVAVIGsGPAGLaAA~~Lar~Gh~VTVFEk~~~~GG 574 (1012)
T TIGR03315 536 SAHKVAVIGAGPAGLSAGYFLARAGHPVTVFEKKEKPGG 574 (1012)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 998899989778999999999977995699815897885
No 405
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=90.59 E-value=1.4 Score=23.74 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=37.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHH
Q ss_conf 98878999809898999999998879789999676777134226827987899999999997
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFA 62 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~ 62 (354)
+..+|+.|-|-|..|.-++..+.++|.+++.+...... .+.-..++.+.+....
T Consensus 21 l~g~~vaVqGfGnVG~~~a~~l~~~GakvvavsD~~G~--------i~~~~g~~~~~~~~~~ 74 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGY--------IYDPGITTEELINYAV 74 (217)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCE--------EECCCCCCHHHHHHHH
T ss_conf 57999999898899999999999859989999857871--------7789998699999999
No 406
>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.
Probab=90.57 E-value=0.72 Score=25.72 Aligned_cols=47 Identities=21% Similarity=0.290 Sum_probs=32.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEE-ECCCCCCHHHCCCEEEECC
Q ss_conf 8999809898999999998879789999-6767771342268279878
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVIL-DPDSNCPANQVSNQQIAAR 51 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~-d~~~~~pa~~~ad~~~~~~ 51 (354)
||.|+|+|.+||++..-+++.+++++.+ |.+.......+.+..+.++
T Consensus 1 KiiIiGaGg~ar~v~~~~~~~~~~v~gfiDd~~~~~~~~~~~~~vlg~ 48 (201)
T TIGR03570 1 KLVIIGAGGHGRVVADIAESSGWEIVGFLDDNPALQGTSVDGLPVLGG 48 (201)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECC
T ss_conf 999996788999999999968993999998983006751588248670
No 407
>PRK06720 hypothetical protein; Provisional
Probab=90.57 E-value=1.4 Score=23.73 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=44.9
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCC---HHHCC-----CEEEECCCCCHHHHHHHHH
Q ss_conf 88789998098-989999999988797899996767771---34226-----8279878999999999974
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCP---ANQVS-----NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~p---a~~~a-----d~~~~~~~~D~~~l~~~~~ 63 (354)
+-|++.|-|++ -+||.++....+.|.+|++.|.+.+.. +..+. ..++..|..|.+.+.++.+
T Consensus 15 ~gKvalITGa~~GIG~a~A~~la~~Ga~Vvi~d~~~~~~~~~~~~i~~~g~~a~~~~~Dvs~~~~v~~~i~ 85 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVIS 85 (169)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 99999998975489999999999869989995276365999999999749953789758899999999999
No 408
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=90.54 E-value=0.52 Score=26.66 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=40.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCC---EEE
Q ss_conf 89998098989999999988797899996767771342268279878999999999974199---999
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICD---YAT 69 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~D---vit 69 (354)
+||+||=|..|.-|+.-..+-|++|.++|.+++.. ..+...-... .+.+.++++.+| +|.
T Consensus 2 kIGfIGLG~MG~~mA~nL~~~G~~V~v~dr~~~~~-~~~~~~ga~~----~~s~~e~~~~~d~prvI~ 64 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAV-EALAAEGATG----AASLEELVAKLPAPRVVW 64 (301)
T ss_pred EEEEECHHHHHHHHHHHHHHCCCEEEEECCCHHHH-HHHHHCCCEE----CCCHHHHHHHCCCCCEEE
T ss_conf 79998345879999999996899079976999999-9999859943----299999997078887799
No 409
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=90.53 E-value=1.1 Score=24.51 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=29.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098-989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.+.+.
T Consensus 7 L~gK~alVTG~s~GIG~aiA~~la~~Ga~Vvi~~r~~ 43 (251)
T PRK07523 7 LTGRRALITGSSQGIGYALAKGLAQAGAEVILNGRDA 43 (251)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 8999899958366999999999998799999996998
No 410
>PRK06114 short chain dehydrogenase; Provisional
Probab=90.48 E-value=1.4 Score=23.68 Aligned_cols=62 Identities=16% Similarity=0.200 Sum_probs=39.0
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC---------CEEEECCCCCHHHHHHHHH
Q ss_conf 88789998098-98999999998879789999676777134226---------8279878999999999974
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVS---------NQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~a---------d~~~~~~~~D~~~l~~~~~ 63 (354)
+.|++.|-|++ -+|+.++++..+.|.+|++.|...+......+ ...+.+|..|.+.+.++.+
T Consensus 15 ~gKvalVTGa~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~v~ 86 (262)
T PRK06114 15 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKSDLAAAVA 86 (262)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 999899968478999999999998799899995897469999999999659958999816899999999999
No 411
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated
Probab=90.41 E-value=0.56 Score=26.47 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=30.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8999809898999999998879789999676777
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
-|.|+|+|--|.+++....+.|+++.++|..+..
T Consensus 14 dVlIVGaGPvGL~lA~~Lar~Gi~v~vvEr~~~~ 47 (554)
T PRK06183 14 DVVIVGAGPVGLTLANLLGQQGVRVLVLERWPTL 47 (554)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 8899995989999999999779999999189998
No 412
>PRK12828 short chain dehydrogenase; Provisional
Probab=90.41 E-value=1.2 Score=24.11 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=29.5
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+.|++.|-||+ -+|+..+....+.|.+|++.+.+.+
T Consensus 6 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~~~~~ 42 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAA 42 (239)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 9898999472548999999999987998999979877
No 413
>PRK12937 short chain dehydrogenase; Provisional
Probab=90.38 E-value=0.93 Score=24.98 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=28.5
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 88789998098-989999999988797899996767
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
+.|++.|-||+ -+|+.++....+-|.+|++.+...
T Consensus 4 sgK~alVTGgs~GIG~aia~~la~~Ga~V~i~~~~~ 39 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS 39 (245)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 998899948577899999999998799999976998
No 414
>PRK06101 short chain dehydrogenase; Provisional
Probab=90.36 E-value=1.3 Score=23.95 Aligned_cols=60 Identities=13% Similarity=0.217 Sum_probs=38.5
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC----C-EEEECCCCCHHHHHHHHHH
Q ss_conf 789998098-98999999998879789999676777134226----8-2798789999999999741
Q gi|254780158|r 4 KTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVS----N-QQIAARHDDIKALNTFADI 64 (354)
Q Consensus 4 k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~a----d-~~~~~~~~D~~~l~~~~~~ 64 (354)
|||.|.|++ -+|+.++....+.|++|++++.+++.- ..++ + ..+..|..|.+.+.+....
T Consensus 2 ktvlITGassGIG~a~A~~la~~G~~Vi~~~R~~~~l-~~~~~~~~~~~~~~~Dvtd~~~~~~~~~~ 67 (241)
T PRK06101 2 TSVLITGATSGIGKQLALDYAKAGWKVIACGRNEAVL-DELHDQSSNIFTLAFDVTDYEETKAALSQ 67 (241)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 9899922404999999999998799899998999999-99997328804898522679999999997
No 415
>PRK07062 short chain dehydrogenase; Provisional
Probab=90.33 E-value=1.4 Score=23.87 Aligned_cols=63 Identities=14% Similarity=0.151 Sum_probs=40.8
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---HC-----CCE--EEECCCCCHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134---22-----682--79878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---QV-----SNQ--QIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~-----ad~--~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-||+ -+|+.++.+..+.|.+|++.+.+.+.... .+ .+. .+..|..|.+.+.++.+
T Consensus 6 L~gK~alITG~s~GIG~a~a~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvt~~~~v~~~v~ 79 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAA 79 (265)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 89998999575779999999999987999999979889999999999873699659999757999999999999
No 416
>pfam07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=90.30 E-value=0.75 Score=25.60 Aligned_cols=33 Identities=27% Similarity=0.514 Sum_probs=28.8
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 999809898999999998879789999676777
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|.|||||-=|...+..++++|++|.++|+....
T Consensus 2 VvIIGgG~AGl~aA~~l~~~g~~v~lid~~~~~ 34 (277)
T pfam07992 2 VVIIGGGPAGLAAAIYLARLGLKVALIEKEGGT 34 (277)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 999997699999999998499979999379993
No 417
>PRK06841 short chain dehydrogenase; Provisional
Probab=90.29 E-value=1.5 Score=23.60 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=30.8
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++.+..+.|.+|++.|.+++
T Consensus 13 l~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~d~~~~ 50 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED 50 (255)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 99999999796778999999999987999999969878
No 418
>PRK07190 hypothetical protein; Provisional
Probab=90.17 E-value=0.76 Score=25.59 Aligned_cols=38 Identities=29% Similarity=0.448 Sum_probs=31.9
Q ss_pred CCCC--EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 9887--8999809898999999998879789999676777
Q gi|254780158|r 1 MKKK--TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k--~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|+-+ =|.|+|+|--|.|++....+.|+++.++|..+..
T Consensus 1 m~~~~tDVlIVGaGPvGL~lA~~La~~Gv~v~VlEr~~~~ 40 (480)
T PRK07190 1 MSAQVADVVIVGAGPVGLMCAYLGQRCGINTVIVDKSDGP 40 (480)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 9988644899993889999999998879999999699999
No 419
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=90.15 E-value=0.82 Score=25.36 Aligned_cols=38 Identities=18% Similarity=0.360 Sum_probs=31.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 88789998098989999999988797899996767771
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
+.|+|.|||+|--|.--|.-..++|++|.|++..+..-
T Consensus 549 tgKKVAVIGsGPAGLaAA~~Lar~Gh~VTVFEk~~~~G 586 (1032)
T PRK09853 549 SRHPVAVIGAGPAGLAAGYFLARAGHPVTVFEREENAG 586 (1032)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 89979998968899999999997799369981589788
No 420
>PRK09126 hypothetical protein; Provisional
Probab=90.13 E-value=0.67 Score=25.92 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=32.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|.+--|.|+|+|--|..++.+..+.|++|.+++..+.
T Consensus 1 Mm~~DV~IvGaGp~Gl~lA~~La~~G~~v~viE~~~~ 37 (392)
T PRK09126 1 MMHSDILVVGAGPAGLSFARSLAGSGLKVTLIERQPL 37 (392)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 9989999999258999999999868998999908985
No 421
>PRK08507 prephenate dehydrogenase; Validated
Probab=90.11 E-value=0.82 Score=25.33 Aligned_cols=80 Identities=21% Similarity=0.322 Sum_probs=45.8
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHH-HH
Q ss_conf 89998098989999999988797--8999967677713422682798789999999999741999998772221133-34
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEKS-IS 81 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~-l~ 81 (354)
+|+|+|-|-.|-=++.+.++.|. +|+.+|+++..-........+. ...+. .+ .+.+|+|.+- +|... ..
T Consensus 2 ~I~IiGlGLiGgSla~alk~~~~~~~V~g~d~~~~~~~~A~~~g~id-~~~~~---~~-i~~aDlVila---~Pv~~~~~ 73 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKENKLISCVYGYDHNEEHEKDALDLGLVD-EIVEF---EE-IKECDVIFLA---IPVDAIIE 73 (275)
T ss_pred EEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCC-CCCCH---HH-CCCCCEEEEE---CCHHHHHH
T ss_conf 89999008789999999995099867999959999999999869986-10673---12-3657989991---76999999
Q ss_pred HHHHCCCCCCC
Q ss_conf 44302003487
Q gi|254780158|r 82 YLSTLLPTYPS 92 (354)
Q Consensus 82 ~l~~~~~v~P~ 92 (354)
.+++..++.|+
T Consensus 74 ~l~~l~~l~~~ 84 (275)
T PRK08507 74 ILQKLLDIKEN 84 (275)
T ss_pred HHHHHHHCCCC
T ss_conf 99998604678
No 422
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.11 E-value=1.6 Score=23.48 Aligned_cols=62 Identities=13% Similarity=0.066 Sum_probs=38.3
Q ss_pred CCCEEEEEC--CCH-HHHHHHHHHHHCCCEEEEEECCCCCC------HHHC-CCEEEECCCCCHHHHHHHHH
Q ss_conf 887899980--989-89999999988797899996767771------3422-68279878999999999974
Q gi|254780158|r 2 KKKTIGIIG--GGQ-LARMLSMSAARLGFCTVILDPDSNCP------ANQV-SNQQIAARHDDIKALNTFAD 63 (354)
Q Consensus 2 ~~k~IgIlG--~Gq-L~rml~~aA~~lG~~v~v~d~~~~~p------a~~~-ad~~~~~~~~D~~~l~~~~~ 63 (354)
+-|+++|-| +|+ +|+..+.+..+.|.+|++.+.++..- +... +..++.+|..|.+.+.++.+
T Consensus 5 ~GK~alVTGaa~g~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~ 76 (254)
T PRK07533 5 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPLLMPLDVREPGQLEAVFA 76 (254)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
T ss_conf 999899968889808999999999987999999828877899999999745981899916999999999999
No 423
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=89.97 E-value=0.88 Score=25.15 Aligned_cols=33 Identities=27% Similarity=0.438 Sum_probs=28.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 789998098989999999988797899996767
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
++++|+|.|.+|.-|+....+.|++|++-.+..
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~ 34 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRG 34 (211)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 179996257187899999996797399964788
No 424
>pfam01134 GIDA Glucose inhibited division protein A.
Probab=89.96 E-value=0.68 Score=25.88 Aligned_cols=95 Identities=20% Similarity=0.214 Sum_probs=57.1
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHH-
Q ss_conf 9998098989999999988797899996767771342268279878999999999974199999877222113334443-
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESENIPEKSISYLS- 84 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E~i~~~~l~~l~- 84 (354)
|-|||||--|.|-|.+|.++|.+|..+..+.+..+.-.|.-.+-+.- -.. +.+-.|+ +.........
T Consensus 2 ViVIGgGhAG~EAA~aaAr~G~~v~Lit~~~~~ig~msCnpSiGG~g-kG~----LvrEida-------LgG~m~~~aD~ 69 (391)
T pfam01134 2 VIVIGGGHAGCEAALAAARMGAKVLLITHNTDTIAELSCNPSIGGIA-KGH----LVREIDA-------LGGLMGKAADK 69 (391)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCC-CCH----HHHHHHH-------CCCHHHHHHHH
T ss_conf 79999878999999999868996899973424315886565568753-043----9999987-------25899999999
Q ss_pred --HCCCC-----CCCHHHHHHHHCCHHHHHHHHHC
Q ss_conf --02003-----48767787631527888887650
Q gi|254780158|r 85 --TLLPT-----YPSSRAIEISQDRLYEKKFFQES 112 (354)
Q Consensus 85 --~~~~v-----~P~~~al~~~~dK~~~K~~l~~~ 112 (354)
-..++ -|...+++...||...++.+++.
T Consensus 70 s~Iq~r~LN~skGpAv~a~R~q~Dr~~y~~~~~~~ 104 (391)
T pfam01134 70 TGIQFRMLNTSKGPAVRALRAQVDRDLYSKEMTET 104 (391)
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 75456530446787666858998799999999999
No 425
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=89.94 E-value=1 Score=24.70 Aligned_cols=33 Identities=24% Similarity=0.450 Sum_probs=30.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 878999809898999999998879789999676
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
...|.|+|||--|.+++.+.++.|++|.+++..
T Consensus 2 ~~dV~IvGaG~aGl~lA~~L~~~G~~V~liE~~ 34 (387)
T COG0654 2 MLDVAIVGAGPAGLALALALARAGLDVTLLERA 34 (387)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 854999997899999999998289968999077
No 426
>PRK07680 late competence protein ComER; Validated
Probab=89.92 E-value=0.84 Score=25.28 Aligned_cols=62 Identities=15% Similarity=0.223 Sum_probs=37.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC----EEEEEECCCCCCHHHCCCEE-EECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 89998098989999999988797----89999676777134226827-98789999999999741999998
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGF----CTVILDPDSNCPANQVSNQQ-IAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~----~v~v~d~~~~~pa~~~ad~~-~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
+||+||+|.+|..++....+-|. ++.+.+++++.. ..+...+ -+.-+.|. .+.++.||+|..
T Consensus 2 kI~fIG~GnMg~Aii~gl~~~~~~~~~~i~i~~r~~~~~-~~l~~~~~~i~~~~~~---~~~~~~~dvIiL 68 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESRAVKPSCLTITNRTPAKA-YHIKEKYPSIHVAKTI---EEVIEQSELIFI 68 (273)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH-HHHHHHCCCEEEECCH---HHHHHCCCEEEE
T ss_conf 899987699999999999977998945699988998999-9999876990886888---999840998999
No 427
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.90 E-value=1.6 Score=23.37 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=38.5
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC---CEEEECCCCCHHHHHHHH
Q ss_conf 88789998098-98999999998879789999676777134226---827987899999999997
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVS---NQQIAARHDDIKALNTFA 62 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~a---d~~~~~~~~D~~~l~~~~ 62 (354)
+.|++.|-|++ -+|+.++++..+.|.+|++.+...+..+..+. -..+.+|..|.+.+.++.
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~v 70 (254)
T PRK06463 6 KGKVALITGGSRGIGRAIAEKFLKEGAKVAILYNSSEDKAKELKEKGVETFKCDVSNRDQVRKAK 70 (254)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH
T ss_conf 98989994847789999999999889999996499789999998669889997389999999999
No 428
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC; InterPro: IPR011967 This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring . The sequences included in this entry are all found in possible operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN . Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. .
Probab=89.89 E-value=0.72 Score=25.72 Aligned_cols=110 Identities=20% Similarity=0.217 Sum_probs=62.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCE-------EEECCCCCHHHHHHHHHHCCEEEECCCCC
Q ss_conf 87899980989899999999887978999967677713422682-------79878999999999974199999877222
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQ-------QIAARHDDIKALNTFADICDYATYESENI 75 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~-------~~~~~~~D~~~l~~~~~~~Dvit~E~E~i 75 (354)
..+|.+||+|-.|-=.++-|.+-|+.|..||..+++.+..++.. +..+.. +...-....+| -|
T Consensus 5 ~v~vaVIGaGaMGaGIA~VAA~aGH~V~LYD~r~eA~a~a~agIe~~L~~lV~kgkL-~a~e~e~~l~R---------l~ 74 (508)
T TIGR02279 5 VVKVAVIGAGAMGAGIAQVAARAGHQVLLYDIRAEALARAVAGIEKRLKSLVEKGKL-TAEEAERTLKR---------LV 74 (508)
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHC---------CC
T ss_conf 106899646852103899998259848872288899999999999998887523777-78888888731---------78
Q ss_pred CHHHHHHHHHCCCCCCCHHHHHHHHCCHHH-HHHHHHCC-CCCCCCCCCCHHHHH
Q ss_conf 113334443020034876778763152788-88876505-886743210006888
Q gi|254780158|r 76 PEKSISYLSTLLPTYPSSRAIEISQDRLYE-KKFFQESG-LTTVDFYEINSQESL 128 (354)
Q Consensus 76 ~~~~l~~l~~~~~v~P~~~al~~~~dK~~~-K~~l~~~g-ipt~~~~~v~s~~el 128 (354)
|++.|..+++-.-+ ++.+.-++.- |++|.++. +-+|.....+|..++
T Consensus 75 PV~~l~alAdAgLv------IEAivE~L~VK~aLFaqLe~lc~ad~iiasNTSSl 123 (508)
T TIGR02279 75 PVTDLEALADAGLV------IEAIVENLEVKKALFAQLEELCTADAIIASNTSSL 123 (508)
T ss_pred CHHHHHHHHHCCCC------HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHH
T ss_conf 77899998602732------24677406777999998986367015256232577
No 429
>pfam01266 DAO FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Probab=89.88 E-value=1.6 Score=23.41 Aligned_cols=31 Identities=26% Similarity=0.484 Sum_probs=28.5
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9998098989999999988797899996767
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|.|||+|-.|...|..+.+.|++|.++|...
T Consensus 2 v~IIGaGi~Gls~A~~La~~G~~V~vie~~~ 32 (309)
T pfam01266 2 VVVIGGGIVGLSTAYELARRGLSVTLLERGD 32 (309)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 9999927999999999997899599994999
No 430
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=89.84 E-value=0.72 Score=25.74 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=30.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|.+=-|.|||+|-=|.-.+..|.++|.+|.+++.++
T Consensus 1 M~~YDviIIGaGpaG~~AA~~aa~~G~kV~liE~~~ 36 (438)
T PRK07251 1 MLTYDLIVIGFGKAGKTLAAKLASAGKKVALVERSK 36 (438)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 995587999978899999999997889499994699
No 431
>PRK07608 hypothetical protein; Provisional
Probab=89.83 E-value=0.68 Score=25.91 Aligned_cols=35 Identities=23% Similarity=0.629 Sum_probs=30.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 89998098989999999988797899996767771
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCP 39 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~p 39 (354)
-|.|+|+|--|..++.+..+.|++|.+++..+..+
T Consensus 7 DV~IvGaGp~Gl~lA~~La~~G~~v~viE~~~~~~ 41 (389)
T PRK07608 7 DVAVVGGGLVGKSLALALAQSGLRVALLEAQPPAP 41 (389)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 88999906899999999983799889995899876
No 432
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=89.82 E-value=0.81 Score=25.39 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=31.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 887899980989899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
..|+|+|+|-|-.|+-++..+.+.|++|.++|....
T Consensus 13 ~~kkv~i~GlG~sG~a~a~~L~~~g~~v~~~D~~~~ 48 (458)
T PRK01710 13 KNKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKSE 48 (458)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 899699997878899999999978897999989884
No 433
>PRK13748 putative mercuric reductase; Provisional
Probab=89.80 E-value=0.9 Score=25.08 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=26.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 999809898999999998879789999676
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|.|||||-=|..-+..|.++|.+|.+++..
T Consensus 101 liVIG~GpaG~~AA~~Aa~~G~kValVE~~ 130 (561)
T PRK13748 101 VAVIGSGGAAMAAALKAVEQGARVTLIERG 130 (561)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 899895889999999999789979999479
No 434
>PRK08278 short chain dehydrogenase; Provisional
Probab=89.73 E-value=1.3 Score=23.94 Aligned_cols=37 Identities=27% Similarity=0.331 Sum_probs=31.0
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++....+.|.+|++.+.+.+
T Consensus 4 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~ 41 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 89998999487659999999999987998999967722
No 435
>PRK08643 acetoin reductase; Validated
Probab=89.73 E-value=1.4 Score=23.85 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=37.8
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC---------EEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771342268---------279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSN---------QQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad---------~~~~~~~~D~~~l~~~~~ 63 (354)
|+ |++.|-||+ -+|+.+++...+.|++|++.|.+.+. +...++ ..+.+|..|.+.+.++.+
T Consensus 1 mn-KvalVTGg~~GIG~aia~~la~~Ga~V~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~ 71 (256)
T PRK08643 1 MS-KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEET-AKAAADKLSSDGGKAIAVKADVSNRDQVFDAVQ 71 (256)
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 98-499995757889999999999879999999698899-999999998539909999805899999999999
No 436
>PRK06482 short chain dehydrogenase; Provisional
Probab=89.70 E-value=1.7 Score=23.27 Aligned_cols=62 Identities=18% Similarity=0.105 Sum_probs=40.5
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHCCC--EEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-9899999999887978999967677713---42268--279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQVSN--QQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~ad--~~~~~~~~D~~~l~~~~~ 63 (354)
|+ |++.|-|++ -+|+.++..+.+.|++|++.+.+++.-. ....+ ..+..|..|.+.+.+.++
T Consensus 1 M~-Kv~lITGaSsGiG~ala~~l~~~G~~Vi~t~R~~~~l~~l~~~~~~~~~~~~~Dvt~~~~v~~~v~ 68 (276)
T PRK06482 1 MT-KTWFITGASSGFGRGLTERLLARGDRVAATVRRPDALDDLKARYGERLWVLQLDVTDTAAVRAVVD 68 (276)
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 99-789991586599999999999889989999789899999998669957999953799999999999
No 437
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=89.70 E-value=1.7 Score=23.27 Aligned_cols=37 Identities=24% Similarity=0.439 Sum_probs=30.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|+|+|+|||..|..=+....+-|-+|.|+.|...
T Consensus 11 l~~k~vLVvGGG~VA~rK~~~Ll~~ga~VtVvsp~~~ 47 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPEIC 47 (157)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 5998799988989999999999878796999999868
No 438
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=89.67 E-value=1.7 Score=23.25 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=28.6
Q ss_pred CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 8789998098-989999999988797899996767
Q gi|254780158|r 3 KKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 3 ~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
.|++.|-|++ -+|+.+++...+.|.+|++.|.++
T Consensus 8 gKvalITGas~GIG~aiA~~la~~Ga~V~~~~r~~ 42 (260)
T PRK12823 8 GKVAVVTGAAQGIGRGVALRAAAEGARVVLVDRSE 42 (260)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 99899948867899999999998799999996946
No 439
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=89.65 E-value=1.3 Score=23.99 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=29.9
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+.|++.|-||+ -+|+.++.+..+.|.+|++.|.+.+
T Consensus 6 ~gKvalVTGgs~GIG~a~A~~la~~Ga~V~i~~~~~~ 42 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQD 42 (262)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 9998999585778999999999987999999979889
No 440
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional
Probab=89.63 E-value=1.1 Score=24.62 Aligned_cols=46 Identities=17% Similarity=0.170 Sum_probs=28.1
Q ss_pred CEEEEECCCH-HH--HHHHHHHHHCCCEEEEEECCCCCC-------HHHCCCEEEE
Q ss_conf 7899980989-89--999999988797899996767771-------3422682798
Q gi|254780158|r 4 KTIGIIGGGQ-LA--RMLSMSAARLGFCTVILDPDSNCP-------ANQVSNQQIA 49 (354)
Q Consensus 4 k~IgIlG~Gq-L~--rml~~aA~~lG~~v~v~d~~~~~p-------a~~~ad~~~~ 49 (354)
+++.++|||- .+ ..++.+.++.|.+|.++-...+.. -.+++|+.++
T Consensus 99 g~vv~VgGGvG~Ap~~piakalk~~Gn~v~~I~Gar~k~~vilede~~~~~d~~~i 154 (760)
T PRK12778 99 GTVVCAGGGVGVAPMLPIVQALKAAGNRVITVLAGRSKELIILEKEMRESSDEVII 154 (760)
T ss_pred CEEEEEECCEEHHHHHHHHHHHHHCCCEEEEEEECCCHHHEEHHHHHHHHCCEEEE
T ss_conf 73999958696898799999999869959999842663340359999974386999
No 441
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.62 E-value=1.7 Score=23.23 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=29.6
Q ss_pred CCCCEEEEECCCH---HHHHHHHHHHHCCCEEEEEECC
Q ss_conf 9887899980989---8999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGGQ---LARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~Gq---L~rml~~aA~~lG~~v~v~d~~ 35 (354)
|+.|++.|-|+++ +|+.++.+..+.|..|++.+.+
T Consensus 4 L~gKvalVTGas~~~GIG~aiA~~la~~Ga~Vvi~~~~ 41 (257)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGYDIFFTYWT 41 (257)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECC
T ss_conf 89888999288999862999999999879989998365
No 442
>pfam03486 HI0933_like HI0933-like protein.
Probab=89.60 E-value=0.89 Score=25.09 Aligned_cols=32 Identities=28% Similarity=0.504 Sum_probs=29.5
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 99980989899999999887978999967677
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|.|||||--|.|.|..|.+.|.+|.+++.++.
T Consensus 3 v~VIGgGaaGl~aAi~aa~~g~~V~ilEk~~~ 34 (405)
T pfam03486 3 VIVIGGGAAGLMAAISAAKRGRRVLLIEKGKK 34 (405)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 99999669999999999868995999958998
No 443
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=89.60 E-value=0.72 Score=25.71 Aligned_cols=32 Identities=19% Similarity=0.431 Sum_probs=29.3
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 99980989899999999887978999967677
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|.|+|+|--|.+++.+..+.|++|.++|..+.
T Consensus 20 V~IVGaGp~Gl~lAl~La~~Gi~v~viE~~~~ 51 (413)
T PRK07364 20 VVIVGGGIVGLTLAAALKDSGLRIALIEAQPA 51 (413)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 89999279999999999868998899917997
No 444
>PRK06370 mercuric reductase; Validated
Probab=89.59 E-value=0.79 Score=25.46 Aligned_cols=32 Identities=28% Similarity=0.400 Sum_probs=27.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 89998098989999999988797899996767
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
=|-|||+|-=|.-.+..|.++|.+|.+++.+.
T Consensus 6 DviVIG~GpAG~~AA~~aa~~G~~V~liEk~~ 37 (459)
T PRK06370 6 DAVVIGAGQAGPPLAARAAGLGMKVALIERGL 37 (459)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 58999988899999999996899199996899
No 445
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=89.57 E-value=1.7 Score=23.20 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=30.7
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 988789998098-9899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.|.+.+
T Consensus 10 L~gKvalVTG~s~GIG~aia~~la~~Ga~V~i~~~~~~ 47 (259)
T PRK08213 10 LTGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAE 47 (259)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 99998999487768999999999986999999979889
No 446
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=89.55 E-value=0.63 Score=26.10 Aligned_cols=65 Identities=15% Similarity=0.158 Sum_probs=41.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
+.|||.|-|-|.-|+-++..+.++|.++++.|.++..-. ...+ ..-....+.+.+ |...||++.+
T Consensus 27 ~gk~VaIqG~GnVG~~~A~~l~~~Gakvvv~d~~~~~~~-~~~~-~~~~~~~~~~~~--~~~~~DIl~P 91 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVA-RAAE-LFGATVVAPEEI--YSVDADVFAP 91 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHH-CCCCEEECCHHH--HCCCCCEEEE
T ss_conf 899999989879999999999967997999826889999-9985-689889373323--2277768865
No 447
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=89.51 E-value=0.85 Score=25.26 Aligned_cols=36 Identities=22% Similarity=0.468 Sum_probs=31.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCC
Q ss_conf 98878999809898999999998879---7899996767
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLG---FCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG---~~v~v~d~~~ 36 (354)
|+|=.|.|+|+|--|.+++.+..++| +.|.++++..
T Consensus 1 M~~~DV~IvGaGp~Gl~lAl~L~~~g~~~~~v~viE~~~ 39 (395)
T PRK05732 1 MSRMDVIIVGGGMAGATLALALSRLSHGRLPVALIEAFA 39 (395)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf 971898999938999999999996188997499993788
No 448
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=89.51 E-value=1.6 Score=23.31 Aligned_cols=63 Identities=16% Similarity=0.100 Sum_probs=42.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC----C--EEEECCCCCHHHHHHHHHHCCEEEE
Q ss_conf 878999809898999999998879789999676777134226----8--2798789999999999741999998
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVS----N--QQIAARHDDIKALNTFADICDYATY 70 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~a----d--~~~~~~~~D~~~l~~~~~~~Dvit~ 70 (354)
.|+|+|+|-|-.|+-.+....+.|.+|.+.|..++++..... . .+..++..+ ++...+|++..
T Consensus 7 ~~kv~V~GLG~sG~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~~~~-----~~~~~~d~vV~ 75 (448)
T COG0771 7 GKKVLVLGLGKSGLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGSHDD-----EDLAEFDLVVK 75 (448)
T ss_pred CCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEECCCCCH-----HCCCCCCEEEE
T ss_conf 9979999266510999999997798699983898765323444420372231376411-----00134778998
No 449
>PRK06139 short chain dehydrogenase; Provisional
Probab=89.39 E-value=1.3 Score=23.91 Aligned_cols=64 Identities=14% Similarity=0.186 Sum_probs=45.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---H---CCC--EEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134---2---268--2798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---Q---VSN--QQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~---~ad--~~~~~~~~D~~~l~~~~~~ 64 (354)
++.|++.|-|++ -+|+.++++..+.|.+|++.+.+.+.-.. . ... ..+..|..|.+.+.++++.
T Consensus 4 L~gKvvlITGASsGIG~aiA~~~A~~Ga~Vvl~~R~~~~L~~~a~e~~~~G~~~~~v~~DVsd~~~v~~~~~~ 76 (324)
T PRK06139 4 LHGAVVVITGASSGIGRATAEAFARRGARLVLAARDEEALFEVAEECRALGAEVLVVPTDVTHADQVQALATQ 76 (324)
T ss_pred CCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 5997799938254999999999998799899998999999999999995499489997667885789999999
No 450
>KOG2799 consensus
Probab=89.38 E-value=0.77 Score=25.53 Aligned_cols=101 Identities=18% Similarity=0.197 Sum_probs=65.6
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC-EEEEECCC--CCCCC---------CCCCCCCCHHHHHHHHHH
Q ss_conf 5278888876505886743210006888864100131-25540234--67555---------664544674677898751
Q gi|254780158|r 101 DRLYEKKFFQESGLTTVDFYEINSQESLTNILGGFKG-KGILKTRR--LGYDG---------KGQKVYHENDCTQNLYAS 168 (354)
Q Consensus 101 dK~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~-P~vlKp~~--~GydG---------kG~~~i~~~~~l~~~~~~ 168 (354)
+-+..-+++.+.|+.+|+.+.+.|.||+.+++.++|. -+|+|.-. || -| .|+.++.++++.+..-..
T Consensus 26 hey~~~~ll~~~Gv~vp~g~vA~speEA~~~akklg~kdlVikAQ~lAgG-RgKGtF~SglkgGV~iVf~p~Eak~va~q 104 (434)
T KOG2799 26 HEYRSAALLRKYGINVPLGYVAKSPEEAFAIAKKLGSKDLVIKAQVLAGG-RGKGTFDSGLKGGVKIVFSPQEAKAVASQ 104 (434)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCC-CCCCCCCCCCCCCEEEEECHHHHHHHHHH
T ss_conf 99889999997187888775568878999999970886459975201057-66677376767863797675888888997
Q ss_pred CCC-----------C----C-EEHHH-CCCCCCCCCCEECCCCCCCEEEEE
Q ss_conf 355-----------5----0-10111-145644332010146654139970
Q gi|254780158|r 169 LGN-----------V----P-LILER-FTDFNCEISIIAARSLNGSICFYD 202 (354)
Q Consensus 169 ~~~-----------~----~-~iiEe-~I~~~~Eisviv~r~~~G~~~~~p 202 (354)
.-+ + + +|.|. |...++-+|++.-|...|.+.++.
T Consensus 105 miG~kLiTKQtG~~gk~c~~v~iC~Rk~~~~e~yFsil~dr~~k~pliIas 155 (434)
T KOG2799 105 MIGKKLITKQTGPAGKACSEVYICERKHTRAEYYFSILMDRHTKGPLIIAS 155 (434)
T ss_pred HHCCEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 634020433347888843069985101305678899987304579779982
No 451
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=89.36 E-value=1.4 Score=23.81 Aligned_cols=35 Identities=6% Similarity=0.066 Sum_probs=28.2
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Q ss_conf 9887899980989-8999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGGQ-LARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~d~~ 35 (354)
++.|++.|-||++ +|+.+++...+.|..|.+.+.+
T Consensus 4 l~gK~alITG~s~GIG~aia~~~a~~Ga~V~i~~~~ 39 (245)
T PRK12936 4 LTGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 899989992747689999999999869999998299
No 452
>KOG1447 consensus
Probab=89.33 E-value=1.2 Score=24.27 Aligned_cols=102 Identities=20% Similarity=0.361 Sum_probs=61.4
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE-EEEECCCC-CCCCCCCC---------CCCCHHHHHHHHH-HCC
Q ss_conf 788888765058867432100068888641001312-55402346-75556645---------4467467789875-135
Q gi|254780158|r 103 LYEKKFFQESGLTTVDFYEINSQESLTNILGGFKGK-GILKTRRL-GYDGKGQK---------VYHENDCTQNLYA-SLG 170 (354)
Q Consensus 103 ~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~~g~P-~vlKp~~~-GydGkG~~---------~i~~~~~l~~~~~-~~~ 170 (354)
+..|++++++|+.+-+|...++..+..++..+++-| .|+|.--. |--|||++ +-++.+..-.+.. ..+
T Consensus 25 fQSK~~l~k~Gv~vQ~F~Va~n~kea~E~~k~f~~~EyVvKAQILAGGRGKG~F~nG~KGGVhiTk~k~~vl~l~~qMIG 104 (412)
T KOG1447 25 FQSKEILSKNGVRVQRFFVADNAKEALEAAKRFNAKEYVVKAQILAGGRGKGVFNNGLKGGVHITKDKNVVLQLAKQMIG 104 (412)
T ss_pred HHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf 66678898649058999970670778999985499223776443106765542447765406874487499999999874
Q ss_pred C--------------CCEEHHHCCCCCCC--CCCEECCCCCCCEEEEECC
Q ss_conf 5--------------50101111456443--3201014665413997053
Q gi|254780158|r 171 N--------------VPLILERFTDFNCE--ISIIAARSLNGSICFYDPI 204 (354)
Q Consensus 171 ~--------------~~~iiEe~I~~~~E--isviv~r~~~G~~~~~p~~ 204 (354)
. ..+++-+-++..|| +.++.-|..+|.+.+-.|-
T Consensus 105 ~rL~TKQTpkeGv~VnKVMvAe~~dI~RETYLaiLmDRe~NGPVlvaSP~ 154 (412)
T KOG1447 105 YRLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRECNGPVLVASPQ 154 (412)
T ss_pred HHHHHCCCCCCCEEEEEEEEEECCCCCHHEEEEEEECCCCCCCEEEECCC
T ss_conf 53320448855626555887300361124001435514568977985699
No 453
>pfam02571 CbiJ Precorrin-6x reductase CbiJ/CobK. This family consists of Precorrin-6x reductase EC:1.3.1.54. This enzyme catalyses the reaction: precorrin-6Y + NADP(+) <= precorrin-6X + NADPH. CbiJ and CobK both catalyse the reduction of macocycle in the colbalmin biosynthesis pathway.
Probab=89.33 E-value=1.8 Score=23.09 Aligned_cols=64 Identities=19% Similarity=0.160 Sum_probs=45.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH--HCCCEEEECCCCCHHHHHHHHHH--CCEE
Q ss_conf 78999809898999999998879789999676777134--22682798789999999999741--9999
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPAN--QVSNQQIAARHDDIKALNTFADI--CDYA 68 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~--~~ad~~~~~~~~D~~~l~~~~~~--~Dvi 68 (354)
++|+||||=.=||.++....+.|+ +.+..+....... ..+.....+.+.|.+.+.+|++. .+.|
T Consensus 1 ~~IlilgGT~e~r~la~~L~~~g~-~~v~t~~~~~~~~~~~~~~~~~~G~l~~~~~m~~~i~~~~i~~v 68 (246)
T pfam02571 1 MRILILGGTTEARALAAALAAAGV-VSVVTSLAGRTAAPRLPPLPVRVGGFGGADGLAAYLREEGIDAV 68 (246)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCC-EEEEECCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCEE
T ss_conf 969999736899999999985698-79998475544376678850897998999999999997799799
No 454
>PRK06181 short chain dehydrogenase; Provisional
Probab=89.30 E-value=1.6 Score=23.33 Aligned_cols=61 Identities=21% Similarity=0.282 Sum_probs=43.4
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCH---HHC---C--CEEEECCCCCHHHHHHHHHH
Q ss_conf 789998098-9899999999887978999967677713---422---6--82798789999999999741
Q gi|254780158|r 4 KTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPA---NQV---S--NQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 4 k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa---~~~---a--d~~~~~~~~D~~~l~~~~~~ 64 (354)
|++.|-|++ -+|+.++....+.|++|++.|.+++.-. ..+ . -..+..|..|.+.+.++++.
T Consensus 2 Kv~lITGassGIG~a~A~~la~~Ga~vvl~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~ 71 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGARLVLAARNEERLASLAQELANYGAEALVVATDVSDAEACERLIEA 71 (263)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 9999958101999999999998799899998899999999999995499679998079999999999999
No 455
>pfam00208 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase.
Probab=89.30 E-value=1.8 Score=23.07 Aligned_cols=55 Identities=20% Similarity=0.203 Sum_probs=39.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADI 64 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~ 64 (354)
+.+|+.|-|.|..|+-.++.+.++|.+++.+..... ..+..+=.|.+.|.++.+.
T Consensus 31 ~g~~v~IqGfGnVG~~~a~~l~~~GakvvavsD~~G--------~i~~~~Gldi~~l~~~~~~ 85 (237)
T pfam00208 31 EGKTVAVQGFGNVGSYAAEKLLELGAKVVAVSDSSG--------YIYDPNGIDIEELLELKEE 85 (237)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--------EEECCCCCCHHHHHHHHHH
T ss_conf 899999989889999999999987996999982876--------7999999999999999997
No 456
>PRK12827 short chain dehydrogenase; Provisional
Probab=89.28 E-value=1.8 Score=23.06 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=30.1
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098-989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
++.|++.|-|++ -+|+.++....+.|.+|+++|.+.
T Consensus 4 L~gKvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~ 40 (251)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHP 40 (251)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 8998899968255899999999998799899984888
No 457
>PRK12939 short chain dehydrogenase; Provisional
Probab=89.28 E-value=1.4 Score=23.76 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=29.2
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 88789998098-989999999988797899996767
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
+.|++.|-|++ -+|+..+....+.|.+|++++.+.
T Consensus 6 ~~KvalVTGgs~GIG~aia~~la~~Ga~Vvi~~~~~ 41 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLA 41 (250)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 998799958366899999999998799999996988
No 458
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=89.23 E-value=0.76 Score=25.58 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=29.2
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 99980989899999999887978999967677
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|.|+|+|--|.+++.+..+.|++|.++|..+.
T Consensus 5 V~IvGaGpvGl~lAl~L~~~G~~v~lie~~~~ 36 (405)
T PRK05714 5 LLIVGAGMVGSALALALEGSGLEVLLVDGGPL 36 (405)
T ss_pred EEEECCCHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 99999059999999999618997899958997
No 459
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=89.22 E-value=1.8 Score=23.03 Aligned_cols=136 Identities=13% Similarity=0.161 Sum_probs=70.1
Q ss_pred CEEEEECCCH----HHHHHHHHHHHCCCEE-EEEECCCCC-CHHHCCCEEEECCCCCHHHHHH--HHHHCCEEEECCCC-
Q ss_conf 7899980989----8999999998879789-999676777-1342268279878999999999--97419999987722-
Q gi|254780158|r 4 KTIGIIGGGQ----LARMLSMSAARLGFCT-VILDPDSNC-PANQVSNQQIAARHDDIKALNT--FADICDYATYESEN- 74 (354)
Q Consensus 4 k~IgIlG~Gq----L~rml~~aA~~lG~~v-~v~d~~~~~-pa~~~ad~~~~~~~~D~~~l~~--~~~~~Dvit~E~E~- 74 (354)
-+++|+||++ =.++-+++|.+.|... .+..+.+.. .......+.++..+.+.....+ +.++.|++..-..-
T Consensus 33 G~vliigG~~~y~GA~~laa~aAl~~GaglV~v~~~~~~~~~~~s~~Pe~mv~~~~~~~~~~~~~~~~~~~avviGpGlG 112 (284)
T COG0063 33 GRVLIIGGSRGYTGAPVLAALAALRAGAGLVSLASPPEAASALKSYLPELMVIEVEGKKLLEERELVERADAVVIGPGLG 112 (284)
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCCC
T ss_conf 72899868888898799999999984899389961455666776359530675245501467776404688799788889
Q ss_pred CCH---HHHHHHHH-C-CCCCCCHHHHHHHHCC---------------HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 211---33344430-2-0034876778763152---------------78888876505886743210006888864100
Q gi|254780158|r 75 IPE---KSISYLST-L-LPTYPSSRAIEISQDR---------------LYEKKFFQESGLTTVDFYEINSQESLTNILGG 134 (354)
Q Consensus 75 i~~---~~l~~l~~-~-~~v~P~~~al~~~~dK---------------~~~K~~l~~~gipt~~~~~v~s~~el~~~~~~ 134 (354)
.+. ..+..+-+ . .++.-.++++.+..++ ..+++++.. .+++ ...+..+...++.++
T Consensus 113 ~~~~~~~~~~~~l~~~~~p~ViDADaL~~la~~~~~~~~~~~VlTPH~gEf~rL~g~---~~~~-~~~~r~~~a~~~a~~ 188 (284)
T COG0063 113 RDAEGQEALKELLSSDLKPLVLDADALNLLAELPDLLDERKVVLTPHPGEFARLLGT---EVDE-IEVDRLEAARELAAK 188 (284)
T ss_pred CCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCC---CCCC-CCCCHHHHHHHHHHH
T ss_conf 887899999999724678889947177887747453347818978898999986088---6442-223669999999997
Q ss_pred CCCEEEEEC
Q ss_conf 131255402
Q gi|254780158|r 135 FKGKGILKT 143 (354)
Q Consensus 135 ~g~P~vlKp 143 (354)
++--+|+|-
T Consensus 189 ~~~vvVLKG 197 (284)
T COG0063 189 YGAVVVLKG 197 (284)
T ss_pred CCCEEEEEC
T ss_conf 697899958
No 460
>PRK06172 short chain dehydrogenase; Provisional
Probab=89.19 E-value=1.5 Score=23.56 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=29.9
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+.|++.|-|++ -+|+.++.+..+.|.+|+++|.+++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~~~~~ 42 (253)
T PRK06172 6 SGQVALVTGGAAGIGRATAIAFAREGAKVVVADRDAA 42 (253)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 9998999375768999999999987998999979889
No 461
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=89.11 E-value=1.6 Score=23.32 Aligned_cols=24 Identities=21% Similarity=0.329 Sum_probs=15.6
Q ss_pred EEEECCC--H-H-HHHHHHHHHHCCCEE
Q ss_conf 9998098--9-8-999999998879789
Q gi|254780158|r 6 IGIIGGG--Q-L-ARMLSMSAARLGFCT 29 (354)
Q Consensus 6 IgIlG~G--q-L-~rml~~aA~~lG~~v 29 (354)
+|+||.- + | =.|+-.+.+++|+..
T Consensus 10 ~gliG~PI~HSlSP~ihn~~f~~~gl~~ 37 (288)
T PRK12749 10 IGLMAYPIRHSLSPEMQNKALEKAGLPF 37 (288)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHCCCCE
T ss_conf 9995278110317999999999869981
No 462
>PRK12829 short chain dehydrogenase; Provisional
Probab=89.08 E-value=1.5 Score=23.53 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=29.5
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 88789998098-9899999999887978999967677
Q gi|254780158|r 2 KKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+-|++.|-|++ -+|+..+.+..+.|.+|++.|.+++
T Consensus 10 ~GKvalVTGgs~GIG~aiA~~la~~Ga~V~i~~r~~~ 46 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEA 46 (264)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 9997999473768999999999987998999979989
No 463
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=89.06 E-value=0.54 Score=26.58 Aligned_cols=80 Identities=14% Similarity=0.073 Sum_probs=43.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEE-EHHHCCCCHHHHHHHHH
Q ss_conf 05898527878789999999988677540246775310455388408999412570456046-21001358899999998
Q gi|254780158|r 213 LHKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMAPRVHNSGHW-TEASCVISQFEQHIRSI 291 (354)
Q Consensus 213 l~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~-t~~~~~~sqfe~h~rai 291 (354)
|.+.+....-+++..+.+.+.+++ ||-..|..- +..| +++|.|--.--|-+.+ -.++....+-+.-++--
T Consensus 460 LVEVv~g~~Ts~~t~~~~~~~~~~----lgK~pVvv~----d~pG-Fi~NRil~~~~~ea~~l~~eGa~~~~ID~a~~~~ 530 (715)
T PRK11730 460 LVEVIRGEKTSDETIATVVAYASK----MGKTPIVVN----DCPG-FFVNRVLFPYFAGFSQLLRDGADFRQIDKVMEKQ 530 (715)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH----CCCCEEEEE----CCCC-HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf 488816899999999999999998----198238982----4686-0587899999999999998799999999999874
Q ss_pred HCCCCCCCHH
Q ss_conf 1889997000
Q gi|254780158|r 292 TNLPLGNPNR 301 (354)
Q Consensus 292 ~glpl~~~~~ 301 (354)
.|+|.|.-.+
T Consensus 531 ~G~pmGP~~l 540 (715)
T PRK11730 531 FGWPMGPAYL 540 (715)
T ss_pred CCCCCCHHHH
T ss_conf 7997778788
No 464
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=89.06 E-value=1.9 Score=22.96 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=29.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCC
Q ss_conf 789998098989999999988797-89999676777
Q gi|254780158|r 4 KTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSNC 38 (354)
Q Consensus 4 k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~~ 38 (354)
.||+|+|.|-+|-.++....++|+ ++.++|++.=.
T Consensus 2 skVlivG~GglG~~~~~~La~~Gvg~i~lvD~D~ve 37 (134)
T pfam00899 2 SRVLVVGAGGLGSPAAEYLARAGVGKLTLVDFDTVE 37 (134)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 889998988899999999999389749999895676
No 465
>KOG2304 consensus
Probab=88.97 E-value=0.34 Score=27.94 Aligned_cols=38 Identities=24% Similarity=0.443 Sum_probs=33.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf 87899980989899999999887978999967677713
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPA 40 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa 40 (354)
.|-|+|+|+||.|--.++-|..-|+.|.++|.+.++-.
T Consensus 11 ~~~V~ivGaG~MGSGIAQv~a~sg~~V~l~d~~~~aL~ 48 (298)
T KOG2304 11 IKNVAIVGAGQMGSGIAQVAATSGLNVWLVDANEDALS 48 (298)
T ss_pred CCCEEEECCCCCCHHHHHHHHHCCCCEEEECCCHHHHH
T ss_conf 66247875664320399998851994698547778999
No 466
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=88.96 E-value=0.55 Score=26.51 Aligned_cols=79 Identities=15% Similarity=0.185 Sum_probs=40.7
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEC-CCCCCCEEEEHHHCCCCHHHHHHHHH
Q ss_conf 05898527878789999999988677540246775310455388408999412-57045604621001358899999998
Q gi|254780158|r 213 LHKSIVPASISQKTSLLAHSAMRKVLETLDYVGILCIEFFVTNDGNVIANEMA-PRVHNSGHWTEASCVISQFEQHIRSI 291 (354)
Q Consensus 213 l~~s~~Pa~i~~~~~~~a~~~a~~i~~~L~~~Gv~~VEffv~~dg~i~vnEia-PR~Hnsgh~t~~~~~~sqfe~h~rai 291 (354)
|.+.+....-+++..+.+.+.++++ +-..|. |. +.. ..++|.+- |-..-..+...++....|-+.-++.
T Consensus 457 LVEVi~g~~Ts~et~~~~~~~~~~l----gK~pv~-v~---d~p-GFi~NRil~~~~~ea~~l~~eG~~~~~ID~a~~~- 526 (706)
T PRK11154 457 LVEVIPHAKTSAETIATTVALAKKQ----GKTPIV-VK---DGA-GFYVNRILAPYMNEAARLLLEGEPIEHIDAALVK- 526 (706)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHC----CCEEEE-EC---CCC-CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-
T ss_conf 2799437898389999999999975----987899-63---237-4179999999999999999769999999999997-
Q ss_pred HCCCCCCCHH
Q ss_conf 1889997000
Q gi|254780158|r 292 TNLPLGNPNR 301 (354)
Q Consensus 292 ~glpl~~~~~ 301 (354)
.|+|+|.-.+
T Consensus 527 ~G~pmGPf~l 536 (706)
T PRK11154 527 FGFPVGPITL 536 (706)
T ss_pred CCCCCCHHHH
T ss_conf 5998785688
No 467
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=88.93 E-value=1.1 Score=24.50 Aligned_cols=32 Identities=13% Similarity=0.018 Sum_probs=26.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 88789998098989999999988797899996
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILD 33 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d 33 (354)
..|||+|+|-|..|+-.+....+.|..+.+.+
T Consensus 7 ~gkkv~V~GlG~sG~aaa~~L~~~g~~~~v~~ 38 (468)
T PRK04690 7 EGKRVALWGWGREGRAAYRALRAQLPAQPLTV 38 (468)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEE
T ss_conf 97979998347879999999996699049997
No 468
>PRK08589 short chain dehydrogenase; Validated
Probab=88.74 E-value=1.9 Score=22.82 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=28.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 988789998098-98999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~ 35 (354)
++.|++.|-|++ -+|+.++.+..+.|.+|++.|.+
T Consensus 4 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~d~~ 39 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 997989997825699999999999869999998382
No 469
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=88.72 E-value=1 Score=24.78 Aligned_cols=35 Identities=26% Similarity=0.527 Sum_probs=29.8
Q ss_pred CCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 9887-8999809898999999998879789999676
Q gi|254780158|r 1 MKKK-TIGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k-~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|.++ =+-|||+|-=|.-.+..|.++|.+|.+++..
T Consensus 1 M~~~YDviVIG~GpaG~~aA~~aa~~G~kv~iiE~~ 36 (467)
T PRK07818 1 MMTHYDVVVLGAGPGGYVAAIRAAQLGLKTAVVEPK 36 (467)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 985687899997889999999999789909999489
No 470
>TIGR01035 hemA glutamyl-tRNA reductase; InterPro: IPR000343 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamyl-tRNA reductase (1.2.1.70 from EC), which reduces glutamyl-tRNA to glutamate-1-semialdehyde during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme required NADPH as a coenzyme.; GO: 0008883 glutamyl-tRNA reductase activity, 0050661 NADP binding, 0033014 tetrapyrrole biosynthetic process.
Probab=88.61 E-value=1.6 Score=23.46 Aligned_cols=68 Identities=15% Similarity=0.239 Sum_probs=47.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHHCCCEEEE---CCCC--CHHHHHHHHHHCCEEEE
Q ss_conf 88789998098989999999988797-8999967677713422682798---7899--99999999741999998
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSNCPANQVSNQQIA---ARHD--DIKALNTFADICDYATY 70 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~~pa~~~ad~~~~---~~~~--D~~~l~~~~~~~Dvit~ 70 (354)
+.++++|||+|..|.-.+...++-|+ ++.++..+. .=|..+|+++-- ..++ -.+.|.+....+|+|..
T Consensus 184 ~~~~~LliGAGeMg~Lva~~L~~~~v~~~~i~NRt~-~rA~~LA~e~~~P~~~~f~~La~~~L~~~L~~~Divis 257 (436)
T TIGR01035 184 KGKKVLLIGAGEMGELVAKHLREKGVGKVLIANRTY-ERAEKLAKELGGPEAVKFEALALEKLEEALAEADIVIS 257 (436)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCH-HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
T ss_conf 664189982745799999999648952898855677-89999998707866454445548999999742889998
No 471
>PRK07063 short chain dehydrogenase; Provisional
Probab=88.55 E-value=1.9 Score=22.86 Aligned_cols=63 Identities=11% Similarity=0.167 Sum_probs=40.8
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHH---HC----CC--EEEECCCCCHHHHHHHHH
Q ss_conf 988789998098-98999999998879789999676777134---22----68--279878999999999974
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPAN---QV----SN--QQIAARHDDIKALNTFAD 63 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~---~~----ad--~~~~~~~~D~~~l~~~~~ 63 (354)
++.|++.|-|++ -+|+.++.+..+.|.+|++.|.+.+.... .+ .. ..+.+|..|.+.+.++.+
T Consensus 5 L~gKvalVTGa~~GIG~aiA~~~a~~Ga~V~i~~~~~~~~~~~~~~l~~~~g~~~~~~~~Dvt~~~~v~~~v~ 77 (259)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFVREGAAVALADLDAALAERAAAAIARQTGARVLALPADVTRAASVRAAVA 77 (259)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 5998899958787899999999998799899997987899999999988509918999836899999999999
No 472
>PRK08945 short chain dehydrogenase; Provisional
Probab=88.51 E-value=1.1 Score=24.56 Aligned_cols=36 Identities=25% Similarity=0.461 Sum_probs=30.9
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 988789998098-989999999988797899996767
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
|+.|++.|-|++ -+|+.++....+.|.+|++++.+.
T Consensus 11 L~gK~~lITGas~GIG~aiA~~la~~Ga~Vil~~r~~ 47 (245)
T PRK08945 11 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTE 47 (245)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 8979899948861899999999998799899996988
No 473
>TIGR01179 galE UDP-glucose 4-epimerase; InterPro: IPR005886 Synonym: UDP-galactose 4-epimerase UDP-glucose 4-epimerase (5.1.3.2 from EC) interconverts UDP-glucose and UDP-galactose which are precursors of glucose- and galactose-containing exopolysaccharides (EPS). A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded and described by a separate model. ; GO: 0003978 UDP-glucose 4-epimerase activity, 0006012 galactose metabolic process.
Probab=88.50 E-value=2 Score=22.71 Aligned_cols=65 Identities=22% Similarity=0.225 Sum_probs=48.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCCHHH--CCC-------EEEECCCCCHHHHHHHHH----H--CCEE
Q ss_conf 8999809-8989999999988797899996767771342--268-------279878999999999974----1--9999
Q gi|254780158|r 5 TIGIIGG-GQLARMLSMSAARLGFCTVILDPDSNCPANQ--VSN-------QQIAARHDDIKALNTFAD----I--CDYA 68 (354)
Q Consensus 5 ~IgIlG~-GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~--~ad-------~~~~~~~~D~~~l~~~~~----~--~Dvi 68 (354)
+|+|-|| |=.|--.+.+..+-|++|+++|.=.+.-... ... .++.+|..|.+.|.++.+ . +|+|
T Consensus 1 ~iLVTGGAGYIGSHt~~~Ll~~G~ev~vlDNLs~G~~~~l~~~~~~~G~~~~fv~gDL~D~~~l~~~f~kqql~~~idAV 80 (341)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGYEVVVLDNLSNGSAEALKRGEEITGKEVTFVEGDLRDRELLRRVFEKQQLEHKIDAV 80 (341)
T ss_pred CEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 92686146644358878876359728998157888488750023414853205871751579999998774311675467
Q ss_pred E
Q ss_conf 9
Q gi|254780158|r 69 T 69 (354)
Q Consensus 69 t 69 (354)
.
T Consensus 81 i 81 (341)
T TIGR01179 81 I 81 (341)
T ss_pred E
T ss_conf 5
No 474
>PRK06924 short chain dehydrogenase; Provisional
Probab=88.50 E-value=2 Score=22.71 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=28.8
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 789998098-98999999998879789999676777
Q gi|254780158|r 4 KTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 4 k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
|++.|-|++ -+|+.++....+.|++|+.++.+++.
T Consensus 2 K~alITGas~GIG~aiA~~la~~G~~V~~~~r~~~~ 37 (251)
T PRK06924 2 RYVIITGTSKGLGEAIATQLLEKGTSVISISRRENK 37 (251)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHH
T ss_conf 999992987499999999999879999999798227
No 475
>PRK11036 putative metallothionein SmtA; Provisional
Probab=88.48 E-value=2 Score=22.70 Aligned_cols=130 Identities=15% Similarity=0.191 Sum_probs=65.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH--------CCCE--EEECCCCCHHHHHHHH-HHCCEEEEC--
Q ss_conf 89998098989999999988797899996767771342--------2682--7987899999999997-419999987--
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQ--------VSNQ--QIAARHDDIKALNTFA-DICDYATYE-- 71 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~--------~ad~--~~~~~~~D~~~l~~~~-~~~Dvit~E-- 71 (354)
+|+=+|||. |. ++....++|++|.++|++++.-+.. +++. ++.+ +.+.+.+.. ...|+|++-
T Consensus 47 rVLDvG~G~-G~-~a~~lA~~Gh~Vt~~D~S~~mL~~A~~~a~~~gv~~~~~~v~~---~~q~l~~~~~~~fDlVlcHaV 121 (256)
T PRK11036 47 RVLDAGGGE-GQ-TAIKMAELGHQVTLCDLSAEMIQRAKQAAEAKGVSDNMQFIHC---AAQDIAQHLETPVDLILFHAV 121 (256)
T ss_pred EEEEECCCC-CH-HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEC---CHHHHHHHCCCCCCEEEEEHH
T ss_conf 399837987-79-8999997799799866999999999999886496612798856---899885423688667865136
Q ss_pred CCCC--CHHHHHHHHHCCC-------CCCCHHHHHHHHCCHH---HHHHHHHCCCCCCCCCCC-----CHHHHHHHHHHC
Q ss_conf 7222--1133344430200-------3487677876315278---888876505886743210-----006888864100
Q gi|254780158|r 72 SENI--PEKSISYLSTLLP-------TYPSSRAIEISQDRLY---EKKFFQESGLTTVDFYEI-----NSQESLTNILGG 134 (354)
Q Consensus 72 ~E~i--~~~~l~~l~~~~~-------v~P~~~al~~~~dK~~---~K~~l~~~gipt~~~~~v-----~s~~el~~~~~~ 134 (354)
.|++ |..++..+...++ ++++..++.. .+.. .... ..+++..+.... .+.+++.+.++.
T Consensus 122 LE~v~dP~~~l~~l~~~lkPGG~lSLmfyN~~alv~--~n~l~Gnf~~a--~~~~~~~~~~~LtP~~p~~p~~V~~~l~~ 197 (256)
T PRK11036 122 LEWVADPKSVLQTLWSVLRPGGALSLMFYNANGLLM--HNMVAGNFDYV--QAGMPKRKKRTLSPQYPRDPAQVYQWLEE 197 (256)
T ss_pred HHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHH--HHHHHCCHHHH--HHHCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 772378999999999975899379998428516999--99982589999--73063445521689999999999999997
Q ss_pred CCCEEEEEC
Q ss_conf 131255402
Q gi|254780158|r 135 FKGKGILKT 143 (354)
Q Consensus 135 ~g~P~vlKp 143 (354)
.|+...-|.
T Consensus 198 ~g~~i~~~~ 206 (256)
T PRK11036 198 AGWQIMGKT 206 (256)
T ss_pred CCCEEEEEE
T ss_conf 798277667
No 476
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=88.45 E-value=1.6 Score=23.47 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=29.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCC
Q ss_conf 88789998098989999999988797-8999967677
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSN 37 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~ 37 (354)
.+.+|+|+|.|-+|-..+++..+.|+ +...+|.+.=
T Consensus 10 ~~s~V~v~G~GGvGs~~a~~LarsGVG~l~lvD~D~v 46 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVV 46 (231)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCEE
T ss_conf 5497899888636899999999809975999719990
No 477
>PRK08294 phenol 2-monooxygenase; Provisional
Probab=88.43 E-value=0.9 Score=25.07 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=33.0
Q ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCCCHHHCCC
Q ss_conf 899980989899999999887-97899996767771342268
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARL-GFCTVILDPDSNCPANQVSN 45 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~l-G~~v~v~d~~~~~pa~~~ad 45 (354)
=|+|+|+|--|.|++....++ |+.+.++|..+......-|+
T Consensus 34 DVLIVGAGP~GL~lA~~Lar~~Gv~~~IIDk~~~~~~~~rA~ 75 (634)
T PRK08294 34 DVLIVGCGPAGLILAAQLSQFPEITTRIVERKPGRLELGQAD 75 (634)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
T ss_conf 889999658999999998713799889992799999998837
No 478
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase; InterPro: IPR006236 This group of sequences represent the long form of D-3-phosphoglycerate dehydrogenase, they include the serA gene of one pathway of serine biosynthesis. Shorter forms not in this group include SerA from Escherichia coli. ; GO: 0004617 phosphoglycerate dehydrogenase activity, 0006564 L-serine biosynthetic process.
Probab=88.41 E-value=0.86 Score=25.22 Aligned_cols=66 Identities=20% Similarity=0.303 Sum_probs=47.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf 887899980989899999999887978999967677713422682798789999999999741999998772
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATYESE 73 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~E~E 73 (354)
..|++|++|-|.+|...+..++.+|..+..+||.-... .+... ...-...+.++..++|++|....
T Consensus 138 ~~~~~g~~g~g~~g~~~~~~~~~~~~~~~~~dp~~~~~---~~~~~---g~~~~~~~~~~~~~~d~~~~h~p 203 (535)
T TIGR01327 138 YGKTLGVIGLGRIGSEVAKRAKAFGMKVLAYDPYLPPE---RAEKL---GVELLADLDELLARADFITLHTP 203 (535)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCHH---HHHHH---CHHHHHHHHHHHHHCCEEEEECC
T ss_conf 02200011123011467665443120467525656633---46550---21333207888632453576336
No 479
>TIGR02076 pyrH_arch uridylate kinase, putative; InterPro: IPR011818 Uridylate kinases (also known as UMP kinases) are key enzymes in the synthesis of nucleoside triphosphates. They catalyse the reversible transfer of the gamma-phosphoryl group from an ATP donor to UMP, yielding UDP, which is the starting point for the synthesis of all other pyrimidine nucleotides. The eukaryotic enzyme has a dual specificity, phosphorylating both UMP and CMP, while the bacterial enzyme is specific to UMP. The bacterial enzyme shows no sequence similarity to the eukaryotic enzyme or other nucleoside monophosphate kinases, but rather appears to be part of the amino acid kinase family. It is dependent on magnesium for activity and is activated by GTP and repressed by UTP , . In many bacterial genomes, the gene tends to be located immediately downstream of elongation factor T and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function is found in the archaea and in spirochetes. Structurally, the bacterial and archaeal proteins are homohexamers centred around a hollow nucleus and organised as a trimer of dimers , . Each monomer within the protein forms the amino acid kinase fold and can be divided into an N-terminal region which binds UMP and mediates intersubunit interactions within the dimer, and a C-terminal region which binds ATP and contains a mobile loop covering the active site. Inhibition of enzyme activity by UTP appears to be due to competition for the binding site for UMP, not allosteric inhibition as was previously suspected. This entry represents the archaeal and spirochete proteins.; GO: 0009041 uridylate kinase activity, 0006221 pyrimidine nucleotide biosynthetic process.
Probab=88.36 E-value=0.36 Score=27.74 Aligned_cols=31 Identities=39% Similarity=0.633 Sum_probs=26.6
Q ss_pred CCEEE-EECCCHHHHHHHHHHHHC--CCEEEEEE
Q ss_conf 87899-980989899999999887--97899996
Q gi|254780158|r 3 KKTIG-IIGGGQLARMLSMSAARL--GFCTVILD 33 (354)
Q Consensus 3 ~k~Ig-IlG~GqL~rml~~aA~~l--G~~v~v~d 33 (354)
|.+|+ |.|||.+||.-+..|++| |.....+|
T Consensus 36 k~~v~vVvGGG~~AR~YI~~aR~lnPG~~E~~lD 69 (232)
T TIGR02076 36 KHKVGVVVGGGKTAREYIGVARELNPGASETFLD 69 (232)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 4689988788765889999998608888802456
No 480
>PTZ00052 thioredoxin reductase; Provisional
Probab=88.33 E-value=1.3 Score=23.91 Aligned_cols=30 Identities=27% Similarity=0.261 Sum_probs=26.9
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 999809898999999998879789999676
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
+.|||+|-=|...|..|.++|.+|.+++..
T Consensus 44 vvVIG~GpgG~~AA~~Aa~~G~kValIE~~ 73 (541)
T PTZ00052 44 YVVIGGGPGGMASAKEAAAHGAKVLLFDYV 73 (541)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 899997889999999999889909999424
No 481
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=88.31 E-value=0.68 Score=25.90 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=29.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCC
Q ss_conf 88789998098989999999988797-899996767
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDS 36 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~ 36 (354)
.+.+|+|+|.|-||-..++...++|+ +..++|++.
T Consensus 20 ~~s~VlivG~GGlGs~~~~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 649789988778899999999983997589997874
No 482
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=88.23 E-value=1.1 Score=24.50 Aligned_cols=38 Identities=21% Similarity=0.478 Sum_probs=30.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 98878999809898999999998879789999676777
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSNC 38 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~ 38 (354)
++.|+++|+|||..|.-=+....+-|..|.++.|.-+.
T Consensus 8 l~gk~vLVVGGG~vA~rK~~~Ll~~gA~VtVvsp~~~~ 45 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYGAHITVISPEITE 45 (202)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 28986999889899999999998689969998699998
No 483
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase; InterPro: IPR006398 These sequences represent 2-hydroxy-3-oxopropionate reductase (1.1.1.60 from EC), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism , .; GO: 0008679 2-hydroxy-3-oxopropionate reductase activity, 0046487 glyoxylate metabolic process.
Probab=88.15 E-value=0.54 Score=26.59 Aligned_cols=145 Identities=14% Similarity=0.189 Sum_probs=84.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECCCCCHHHHHHHHHHCCEEEE---CCCCCCHHHH-
Q ss_conf 899980989899999999887978999967677713422682798789999999999741999998---7722211333-
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAARHDDIKALNTFADICDYATY---ESENIPEKSI- 80 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~~~~~Dvit~---E~E~i~~~~l- 80 (354)
|||.||=|-.|..|++=.-|-||++.+.|-++.. .|+.+-.--.-.++..+.++.||+|.. ...+|..-++
T Consensus 1 KvgfIGLGIMG~PMs~NL~kAGyql~v~t~~~e~-----~d~l~aaGa~~a~ta~~~~e~~Dvi~~MvP~sPqVeeva~G 75 (291)
T TIGR01505 1 KVGFIGLGIMGKPMSKNLLKAGYQLVVATLEQEV-----LDELLAAGAESAETAKEVVEDADVIVTMVPDSPQVEEVAFG 75 (291)
T ss_pred CEEEEECCCCCCHHHHHHHHCCCEEEEEECCCHH-----HHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEC
T ss_conf 9045635877865789997549468883077048-----99998617322899999997489799843876970156556
Q ss_pred ----HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCC-----CCCCC----------CC----CHHHHHHHHHHCCCC
Q ss_conf ----44430200348767787631527888887650588-----67432----------10----006888864100131
Q gi|254780158|r 81 ----SYLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLT-----TVDFY----------EI----NSQESLTNILGGFKG 137 (354)
Q Consensus 81 ----~~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gip-----t~~~~----------~v----~s~~el~~~~~~~g~ 137 (354)
-.-++...+.-+-.++.....|.+.|+. ++.|+. +.=-. .| -..|+.+..++-++-
T Consensus 76 enGi~e~ak~G~~lvDMSSI~P~~s~~~a~a~-k~kGid~LDAPVSGGE~gAiegtLSiMVGGd~A~Fd~~kpL~ealgk 154 (291)
T TIGR01505 76 ENGILEAAKKGKVLVDMSSIAPLESKELAKAV-KEKGIDVLDAPVSGGEIGAIEGTLSIMVGGDKAVFDKVKPLLEALGK 154 (291)
T ss_pred CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH-HHCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 87521256888778870567826689999999-97288452077789871001243658764861106766699997269
Q ss_pred EEEEECCCCCCCCCCCC-CCCCH
Q ss_conf 25540234675556645-44674
Q gi|254780158|r 138 KGILKTRRLGYDGKGQK-VYHEN 159 (354)
Q Consensus 138 P~vlKp~~~GydGkG~~-~i~~~ 159 (354)
-+++ .|+ -|.||. ++-|+
T Consensus 155 ~ivl---~G~-~G~Gqt~K~ANQ 173 (291)
T TIGR01505 155 SIVL---VGE-NGDGQTVKVANQ 173 (291)
T ss_pred CEEE---ECC-CCCCCEEEHHHH
T ss_conf 5898---788-899740405447
No 484
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=88.12 E-value=2.1 Score=22.55 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=29.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCCC
Q ss_conf 88789998098989999999988797-89999676777
Q gi|254780158|r 2 KKKTIGIIGGGQLARMLSMSAARLGF-CTVILDPDSNC 38 (354)
Q Consensus 2 ~~k~IgIlG~GqL~rml~~aA~~lG~-~v~v~d~~~~~ 38 (354)
.+-+|+|+|.|-||.+.+......|+ ++.++|.+.=.
T Consensus 20 ~~s~VlvvG~GGLG~~v~~~La~aGvg~i~ivD~d~v~ 57 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVT 57 (197)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 60959998878899999999998379869999899187
No 485
>PHA02518 ParA-like protein; Provisional
Probab=88.07 E-value=2.1 Score=22.53 Aligned_cols=85 Identities=20% Similarity=0.178 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEEC-------CCC--CHHHHHHHHHHCCEEEECCC-CCCHHHHHH
Q ss_conf 98999999998879789999676777134226827987-------899--99999999741999998772-221133344
Q gi|254780158|r 13 QLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAA-------RHD--DIKALNTFADICDYATYESE-NIPEKSISY 82 (354)
Q Consensus 13 qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~-------~~~--D~~~l~~~~~~~Dvit~E~E-~i~~~~l~~ 82 (354)
-++.-|+.+..+.|++|.++|-|++..+....+..-.. .+. -...+.++..+.|+|...-. +........
T Consensus 16 T~a~nLA~~la~~G~~VlliD~DpQ~s~~~w~~~r~~~~~~~~~~~~~~~~~~~l~~~~~~yD~viID~pp~~~~~~~~a 95 (211)
T PHA02518 16 TVATNLASWLHADGHKVLLVDLDPQGSSTDWAEAREEGEPLIPVVRMGKSIRADLPKVASGYDYVVVDGAPQDSELARAA 95 (211)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
T ss_conf 99999999999789948999779996788999852268997401213677999999740678889988999742999999
Q ss_pred HH--H--CCCCCCCHHHHH
Q ss_conf 43--0--200348767787
Q gi|254780158|r 83 LS--T--LLPTYPSSRAIE 97 (354)
Q Consensus 83 l~--~--~~~v~P~~~al~ 97 (354)
+. + .+|+.|+.-.+.
T Consensus 96 l~aaD~vliP~~ps~~d~~ 114 (211)
T PHA02518 96 LRIADMVLIPVQPSPFDIW 114 (211)
T ss_pred HHHCCEEEEECCCCHHHHH
T ss_conf 9958969996378687899
No 486
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]
Probab=87.96 E-value=1.3 Score=23.93 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=19.1
Q ss_pred EEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCC
Q ss_conf 999809898999999998879--789999676777
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLG--FCTVILDPDSNC 38 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG--~~v~v~d~~~~~ 38 (354)
+.|+|+|.=|...+....+++ .++.++..++..
T Consensus 1 ivivG~g~aG~~aa~~l~~~~~~~~i~i~~~~~~~ 35 (415)
T COG0446 1 IVIVGGGAAGLSAATTLRRLLLAAEITLIGREPKY 35 (415)
T ss_pred CEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf 98982559999999999850777885999523544
No 487
>PRK06223 malate dehydrogenase; Reviewed
Probab=87.83 E-value=1.2 Score=24.13 Aligned_cols=108 Identities=16% Similarity=0.148 Sum_probs=57.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCH---HHCCCE--------EEECCCCCHHHHHHHHHHCCEEEEC
Q ss_conf 89998098989999999988797--8999967677713---422682--------7987899999999997419999987
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPA---NQVSNQ--------QIAARHDDIKALNTFADICDYATYE 71 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa---~~~ad~--------~~~~~~~D~~~l~~~~~~~Dvit~E 71 (354)
||+|+|.|+.|.-++......|+ +.+.+|-+++..- ..+.|- .+.+ -.|. +-.+.+|+|..-
T Consensus 2 KI~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~~~~i~~-~~d~----~~~~daDiVVit 76 (312)
T PRK06223 2 KISIIGAGNVGATLAHLLALKELGKDVVLFDIPEGIPQGKALDIAESSAVDGFDAKITG-TNDY----ADIAGSDVVIIT 76 (312)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE-CCCH----HHHCCCCEEEEE
T ss_conf 79999969899999999985799874899769997336798887651433688847983-7888----995799999990
Q ss_pred CCCCCHHHHHHHHHCCCCCCCHHHHH-HHHCCHHHHHHHHHCCC--CCCCCCCCCHHHHHHH
Q ss_conf 72221133344430200348767787-63152788888765058--8674321000688886
Q gi|254780158|r 72 SENIPEKSISYLSTLLPTYPSSRAIE-ISQDRLYEKKFFQESGL--TTVDFYEINSQESLTN 130 (354)
Q Consensus 72 ~E~i~~~~l~~l~~~~~v~P~~~al~-~~~dK~~~K~~l~~~gi--pt~~~~~v~s~~el~~ 130 (354)
- +.+--|+-.-+. ...|-...|++..+..- |.+-+..+.|+-|...
T Consensus 77 a-------------g~~rk~g~tR~dll~~N~~I~k~i~~~i~~~~p~~iilvvsNPvDv~t 125 (312)
T PRK06223 77 A-------------GVPRKPGMSRDDLLGINAKIMKDVGEGIKKYAPDAIVIVITNPVDAMT 125 (312)
T ss_pred C-------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
T ss_conf 6-------------778999988689999878999999999984099818999369368999
No 488
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=87.80 E-value=2.2 Score=22.43 Aligned_cols=35 Identities=20% Similarity=0.091 Sum_probs=28.4
Q ss_pred CCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 988789998098---98999999998879789999676
Q gi|254780158|r 1 MKKKTIGIIGGG---QLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 1 M~~k~IgIlG~G---qL~rml~~aA~~lG~~v~v~d~~ 35 (354)
|+-|+++|.|++ -+|+.++++..+.|.+|++.+.+
T Consensus 3 L~GK~alITGaag~~GIG~aiA~~la~~GA~V~i~~~~ 40 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLN 40 (274)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 89987999899998379999999999869999998488
No 489
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=87.75 E-value=1.4 Score=23.75 Aligned_cols=35 Identities=17% Similarity=0.414 Sum_probs=30.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCC
Q ss_conf 878999809898999999998879--78999967677
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLG--FCTVILDPDSN 37 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG--~~v~v~d~~~~ 37 (354)
|+-|.|+|+|--|.+++.+.++.| ++|.++|+.+.
T Consensus 1 ~~DV~IVGaGpvGl~lAl~L~~~G~~~~v~vie~~~~ 37 (403)
T PRK07333 1 QRDVVIAGGGYVGLALAVALKQAAPHLPVIVVDAAPA 37 (403)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 9839999946999999999984699966999828866
No 490
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=87.75 E-value=1.1 Score=24.62 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=28.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 8789998098989999999988797899996767
Q gi|254780158|r 3 KKTIGIIGGGQLARMLSMSAARLGFCTVILDPDS 36 (354)
Q Consensus 3 ~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~ 36 (354)
+=-|.|||+|-=|.--+..|.++|.+|.+++..+
T Consensus 6 ~YDviVIGaGpaG~~aA~~aa~~G~kV~viE~~~ 39 (465)
T PRK05249 6 DYDAVVIGSGPAGEGAAMQAAKLGKRVAVIERYR 39 (465)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 7898999977899999999997899299997699
No 491
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=87.75 E-value=1.4 Score=23.76 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=27.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 8999809898999999998879789999676
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPD 35 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~ 35 (354)
-|.|||||-=|.+-+.+|.+.|.+|++++..
T Consensus 14 DVlVIGsG~AGL~AAi~a~~~G~~V~li~K~ 44 (598)
T PRK09078 14 DVVVVGAGGAGLRATLGMAEAGLRTACITKV 44 (598)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 9899995699999999998749907999788
No 492
>PRK07985 oxidoreductase; Provisional
Probab=87.71 E-value=2.3 Score=22.39 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=28.2
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEC
Q ss_conf 9887899980989-899999999887978999967
Q gi|254780158|r 1 MKKKTIGIIGGGQ-LARMLSMSAARLGFCTVILDP 34 (354)
Q Consensus 1 M~~k~IgIlG~Gq-L~rml~~aA~~lG~~v~v~d~ 34 (354)
.+.|++.|-|+++ +|+.++++..+.|.+|++.+.
T Consensus 47 L~gKvalVTGas~GIG~aiA~~lA~~GA~Vvi~~~ 81 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECC
T ss_conf 89997999172669999999999987999999429
No 493
>KOG2157 consensus
Probab=87.70 E-value=2.3 Score=22.39 Aligned_cols=49 Identities=8% Similarity=0.091 Sum_probs=31.7
Q ss_pred CCCCCEEEECCCCEEEEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 7753104553884089994125704560462100135889999999818899
Q gi|254780158|r 245 GILCIEFFVTNDGNVIANEMAPRVHNSGHWTEASCVISQFEQHIRSITNLPL 296 (354)
Q Consensus 245 Gv~~VEffv~~dg~i~vnEiaPR~Hnsgh~t~~~~~~sqfe~h~rai~glpl 296 (354)
=+|+.+|.++.+++.|++||+--|--+.--..+++-.+ ..+-.++...+
T Consensus 378 ElyG~DfliD~~lkpwLiEiNssP~~~~t~~~d~~l~~---~l~~d~l~~v~ 426 (497)
T KOG2157 378 ELYGFDFLIDEALKPWLIEINASPDLTQTTKNDARLKS---KLIDDVLKVVV 426 (497)
T ss_pred HHHCCCEEECCCCCEEEEEEECCCCCCCCCHHHHHHHH---HHHHHHHCCCC
T ss_conf 12175123557887689994068752456514567888---88987641406
No 494
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=87.65 E-value=2.2 Score=22.47 Aligned_cols=117 Identities=11% Similarity=0.111 Sum_probs=59.5
Q ss_pred EEEEECCC-HHHHHHHHHHHHCCC--EEEEEECCCCCCHHHCCCEE---------EECCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 89998098-989999999988797--89999676777134226827---------9878999999999974199999877
Q gi|254780158|r 5 TIGIIGGG-QLARMLSMSAARLGF--CTVILDPDSNCPANQVSNQQ---------IAARHDDIKALNTFADICDYATYES 72 (354)
Q Consensus 5 ~IgIlG~G-qL~rml~~aA~~lG~--~v~v~d~~~~~pa~~~ad~~---------~~~~~~D~~~l~~~~~~~Dvit~E~ 72 (354)
||+|+|+| +.|.-++......|+ +++.+|-+++-.-....|-. ......|. +-.+.+|+|....
T Consensus 2 KV~IIGagg~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~~~----~~~~daDiVVita 77 (142)
T pfam00056 2 KVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGSTFLSVPGIVGGDDY----EALKDADVVVITA 77 (142)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEECCCCH----HHHCCCCEEEEEC
T ss_conf 899989877899999999974796634788505776411799998614434788769748838----8837899999815
Q ss_pred CCCCHHHHHHHHHCCCCCCCHHHH-HHHHCCHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHH--HCCCCE
Q ss_conf 222113334443020034876778-763152788888765058--867432100068888641--001312
Q gi|254780158|r 73 ENIPEKSISYLSTLLPTYPSSRAI-EISQDRLYEKKFFQESGL--TTVDFYEINSQESLTNIL--GGFKGK 138 (354)
Q Consensus 73 E~i~~~~l~~l~~~~~v~P~~~al-~~~~dK~~~K~~l~~~gi--pt~~~~~v~s~~el~~~~--~~~g~P 138 (354)
+.+-.|+.+-. ....|....|+...+..- |-+-+..++++-|....+ +..|||
T Consensus 78 -------------G~~~k~g~~R~dll~~Na~I~~~i~~~i~~~~p~~ivivvtNPvDvmt~~~~~~sg~p 135 (142)
T pfam00056 78 -------------GVPRKPGMTRLDLLNRNAGIFKDIVPAIAKSAPDAIVLVVSNPVDILTYIAWKVSGLP 135 (142)
T ss_pred -------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCC
T ss_conf -------------7778999877899997469999999999976998199994594688999999997849
No 495
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=87.57 E-value=1.7 Score=23.27 Aligned_cols=37 Identities=24% Similarity=0.288 Sum_probs=31.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9887899980989899999999887978999967677
Q gi|254780158|r 1 MKKKTIGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 1 M~~k~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
+.+..|.|||||-.|...+..+.+.|.+|++++...-
T Consensus 2 ~~~~~vvIIGgGi~Gls~A~~La~~G~~V~vie~~~~ 38 (387)
T COG0665 2 SMKMDVVIIGGGIVGLSAAYYLAERGADVTVLEAGEA 38 (387)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 9764399989869999999999976991999917988
No 496
>PRK10083 putative dehydrogenase; Provisional
Probab=87.47 E-value=2.3 Score=22.30 Aligned_cols=17 Identities=12% Similarity=0.063 Sum_probs=9.8
Q ss_pred CCCHHHHHHHHHHCCCC
Q ss_conf 35889999999818899
Q gi|254780158|r 280 VISQFEQHIRSITNLPL 296 (354)
Q Consensus 280 ~~sqfe~h~rai~glpl 296 (354)
+..+|++-++-+..=.+
T Consensus 285 ~~~~~~~~~~li~~g~i 301 (339)
T PRK10083 285 NANKFPVVIDWLAKGLI 301 (339)
T ss_pred CHHHHHHHHHHHHCCCC
T ss_conf 88899999999985999
No 497
>KOG2311 consensus
Probab=87.37 E-value=1.5 Score=23.50 Aligned_cols=103 Identities=23% Similarity=0.311 Sum_probs=64.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEECC-----CCCHHHHHHHHHH-CCEEEECCCCCCHH
Q ss_conf 89998098989999999988797899996767771342268279878-----9999999999741-99999877222113
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGFCTVILDPDSNCPANQVSNQQIAAR-----HDDIKALNTFADI-CDYATYESENIPEK 78 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad~~~~~~-----~~D~~~l~~~~~~-~Dvit~E~E~i~~~ 78 (354)
-|-+||||--|.+-+.||.|+|-++..+..+-+..+..-|.-.+-+- +...|+|.-++.+ ||.- .|-..
T Consensus 30 dVvVIGgGHAG~EAAaAaaR~Ga~TlLlT~~ld~Ig~msCNPsfGGigKg~LmrEVDALdGl~~rvcD~s-----~vq~k 104 (679)
T KOG2311 30 DVVVIGGGHAGCEAAAAAARLGARTLLLTHNLDTIGEMSCNPSFGGIGKGHLMREVDALDGLCSRVCDQS-----GVQYK 104 (679)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHH-----HHHHH
T ss_conf 5799878752048889887418734786325561013445765587665302443120025676541155-----55687
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCC
Q ss_conf 334443020034876778763152788888765058867
Q gi|254780158|r 79 SISYLSTLLPTYPSSRAIEISQDRLYEKKFFQESGLTTV 117 (354)
Q Consensus 79 ~l~~l~~~~~v~P~~~al~~~~dK~~~K~~l~~~gipt~ 117 (354)
+|+. ..+ |-.-.++.-.||.+.|+-+++-=-.++
T Consensus 105 ~LNr--s~G---PAVwg~RAQiDR~lYkk~MQkei~st~ 138 (679)
T KOG2311 105 VLNR--SKG---PAVWGLRAQIDRKLYKKNMQKEISSTP 138 (679)
T ss_pred HHHC--CCC---CCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 7502--579---722370876519999999998752687
No 498
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=87.21 E-value=2.1 Score=22.55 Aligned_cols=64 Identities=17% Similarity=0.177 Sum_probs=0.0
Q ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCC----EEEECCCCCHHHHHHHHHH
Q ss_conf 988789998098-989999999988797899996767771342268----2798789999999999741
Q gi|254780158|r 1 MKKKTIGIIGGG-QLARMLSMSAARLGFCTVILDPDSNCPANQVSN----QQIAARHDDIKALNTFADI 64 (354)
Q Consensus 1 M~~k~IgIlG~G-qL~rml~~aA~~lG~~v~v~d~~~~~pa~~~ad----~~~~~~~~D~~~l~~~~~~ 64 (354)
|+-.||+|-||+ -.|+.|+....++|=+|+++..+...-+...+. ...+.|..|.+.+.+|++.
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvew 71 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEW 71 (245)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHH
T ss_conf 447679993796436599999999838979996574999999986094131565132035669999999
No 499
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=87.20 E-value=0.92 Score=25.01 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=0.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCCCHHHCCCEEEECCCCCHHHHH------HHHHHCCEEEE
Q ss_conf 89998098989999999988797--89999676777134226827987899999999------99741999998
Q gi|254780158|r 5 TIGIIGGGQLARMLSMSAARLGF--CTVILDPDSNCPANQVSNQQIAARHDDIKALN------TFADICDYATY 70 (354)
Q Consensus 5 ~IgIlG~GqL~rml~~aA~~lG~--~v~v~d~~~~~pa~~~ad~~~~~~~~D~~~l~------~~~~~~Dvit~ 70 (354)
||+|||+|..|..++.++...|+ +++.+|.+++-...+..|-.....+....... +-.+.+|+|..
T Consensus 1 KI~IIGaG~VG~~~A~~l~~~~~~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~~~~~~~~~~y~~~~~aDiVVi 74 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVI 74 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCEEEE
T ss_conf 98999969899999999985699887999928898237999987612035899865866799899469999998
No 500
>PRK08132 hypothetical protein; Provisional
Probab=87.19 E-value=1.3 Score=24.09 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=0.0
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 99980989899999999887978999967677
Q gi|254780158|r 6 IGIIGGGQLARMLSMSAARLGFCTVILDPDSN 37 (354)
Q Consensus 6 IgIlG~GqL~rml~~aA~~lG~~v~v~d~~~~ 37 (354)
|.|+|+|--|.|++....+.|+++.+++..+.
T Consensus 26 VlIVGaGPvGL~lA~~L~~~Gv~~~vvEr~~~ 57 (549)
T PRK08132 26 VVVVGAGPVGLALAIDLAQQGVPVVLLDDDDT 57 (549)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99999257999999999987999999959999
Done!