RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780159|ref|YP_003064572.1| hypothetical protein CLIBASIA_00210 [Candidatus Liberibacter asiaticus str. psy62] (96 letters) >1s4x_A Integrin beta-3; cell adhesion; NMR {Homo sapiens} (A:) Length = 67 Score = 25.2 bits (55), Expect = 3.0 Identities = 6/38 (15%), Positives = 17/38 (44%) Query: 55 GLLMSLLIILSFTIVQDRRSSPRIDSDIETSEWNSDKN 92 GL+ + + DR+ + + + ++W++ N Sbjct: 12 GLVPRGSHMKLLITIHDRKEFAKFEEERARAKWDTANN 49 >2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A (A:) Length = 38 Score = 24.0 bits (52), Expect = 8.0 Identities = 8/26 (30%), Positives = 16/26 (61%) Query: 49 IASMICGLLMSLLIILSFTIVQDRRS 74 I ++I GLL+ ++L + + RR+ Sbjct: 13 IVAVIFGLLLGAALLLGILVFRSRRA 38 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.327 0.137 0.414 Gapped Lambda K H 0.267 0.0408 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 666,085 Number of extensions: 21647 Number of successful extensions: 82 Number of sequences better than 10.0: 1 Number of HSP's gapped: 82 Number of HSP's successfully gapped: 12 Length of query: 96 Length of database: 4,956,049 Length adjustment: 56 Effective length of query: 40 Effective length of database: 3,062,969 Effective search space: 122518760 Effective search space used: 122518760 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 50 (23.9 bits)