HHsearch alignment for GI: 254780160 and conserved domain: cd03863
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=97.89 E-value=0.00016 Score=47.35 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=61.2
Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCEEEEEEEECCCCE-EEEEEEEEECCCCEEEEEEE
Q ss_conf 89999834788632760899983899797421252121244870289999538824-67779997288504899974
Q gi|254780160|r 211 ITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERN-YSREFSVLTGKSTIVEVLMR 286 (298)
Q Consensus 211 ~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~-y~~~ftV~~g~~~~veV~~~ 286 (298)
T Consensus 299 IkG~V~d~~~g~pI~~A~I~V~g~~h~v~t~~~GdywR-lL~pG~Y~v~~sa~GY~~~t~~v~V~~~~~~~v~f~L~ 374 (375)
T cd03863 299 VRGFVLDATDGRGILNATISVADINHPVTTYKDGDYWR-LLVPGTYKVTASARGYDPVTKTVEVDSKGAVQVNFTLS 374 (375)
T ss_pred CEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCCEEE-EECCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEEE
T ss_conf 72899658999888882999936666246779854799-70781489999967987656999988998189999996