HHsearch alignment of GI: 254780160 and MMDB domain: 1nkg_A_245-337
>1nkg_A (A:245-337) Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin; 1.50A {Aspergillus aculeatus}
Probab=97.48 E-value=0.00072 Score=42.64 Aligned_cols=74 Identities=19% Similarity=0.131 Sum_probs=54.0
Q ss_pred CCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEE-CCCCCEEEEEEECCCCE
Q ss_conf 23279999986887753467599999538887620588982468566302267218999961-57775278998068613
Q gi|254780160|r 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEKN 114 (298)
Q Consensus 36 ~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~-g~~~~~~~vtV~~~~~~ 114 (298)
.+...++.+..+..+.+++||.+++. +. ....+|+.+|.+....++||+|.|.+++ ||....+.+++..+...
T Consensus 11 ~~~~~i~G~V~d~~g~pi~~a~V~i~----~~--~~~~~Td~~G~f~l~~~~~g~y~l~~s~~Gy~~~~~~i~~~~~~~~ 84 (93)
T 1nkg_A 11 SGRGKVAGTASGADSSMDWVVHWYND----AA--QYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVTVSAGSTT 84 (93)
T ss_dssp GGCBEEEEEEESSCTTSCEEEEEECS----SC--EEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEEECTTCEE
T ss_pred CCCCEEEEEEEECCCCCCCEEEEECC----CE--EEEEEECCCCCEECCCCCCCEEEEEEEECCEEEEEEEEEECCCCCE
T ss_conf 67727999997048888715787237----53--8899925888677477125516899996871888646998568624
Q ss_pred E
Q ss_conf 6
Q gi|254780160|r 115 Q 115 (298)
Q Consensus 115 ~ 115 (298)
.
T Consensus 85 ~ 85 (93)
T 1nkg_A 85 T 85 (93)
T ss_dssp E
T ss_pred E
T ss_conf 5