HHsearch results for GI: 254780160 and protein with PDBid: 3kpt_A
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579}
Probab=99.77 E-value=1.8e-16 Score=123.13 Aligned_cols=248 Identities=9% Similarity=0.060 Sum_probs=135.4
Q ss_pred EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCE-----EEEEEECCC
Q ss_conf 279999986887753467599999538887620588982468566302267218999961577752-----789980686
Q gi|254780160|r 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVV-----KKITVSSKE 112 (298)
Q Consensus 38 ~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~g~~~~~-----~~vtV~~~~ 112 (298)
+|.|... +..+..|+||+|+||+... .......+|+++|.+.+.+|+||+|.|+|...|.+|. ..+++....
T Consensus 9 ~i~i~K~--d~~~~~L~Ga~f~l~~~~g-~~~~~~~tTd~~G~~~f~~L~~G~Y~v~E~~aP~GY~~~~~~~~~~v~~~~ 85 (355)
T 3kpt_A 9 AVDLIKT--GVNEKAMAGAVFSLFKKDG-TEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFVKNSG 85 (355)
T ss_dssp EEEEEEE--CGGGCBCCSCEEEEEETTS-CEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCCCCCEEEEECSCE
T ss_pred EEEEEEE--CCCCCEECCCEEEEEECCC-CEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCC
T ss_conf 9999999--8999870895899998999-999787999999839999869632899999899982603442201651365
Q ss_pred CEE----------EEEEECCCCEEEEEEEECCCC----CCCCCEEEEEEE------------------CCCCCE------
Q ss_conf 136----------787513664379998615788----777551899998------------------389743------
Q gi|254780160|r 113 KNQ----------KQVFILNAGGIRLYSIYKPGS----PIVDDELTFSIY------------------SNPNHK------ 154 (298)
Q Consensus 113 ~~~----------~~~~~~~ag~~~~~~~~~~~~----~~~~~~~~f~i~------------------~~~~~~------ 154 (298)
... ....+.......+........ ..+.....+.+. ......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (355)
T 3kpt_A 86 TINEDGTITSGTVVKMEVKNNEEPTIDKKINGKLEALPINPLTNYNYDIKTLIPEDIKEYKKYVVTDTLDNRLVIQGKPI 165 (355)
T ss_dssp EECTTSSCEEECEEEEEEECCBCCCEEEEETTTBSEEEECTTCCEEEEEEEECCTTGGGCSEEEEEEECCTTEEECSCCE
T ss_pred EEEEECEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEECCEEEEEEECCCCCEEECCEEE
T ss_conf 03440115245305778720012110111245125543036754157876325420001347999982656378526046
Q ss_pred ------------EEE----------EEECCCCCEEEEECCCCEEEEEEECCCCCEEEE--E--EEECCCCE-----EEEE
Q ss_conf ------------566----------750567513521067617999961577854454--4--88428863-----7899
Q gi|254780160|r 155 ------------ALL----------ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST--V--VKVEPGKI-----IDVT 203 (298)
Q Consensus 155 ------------~~~----------~t~~~~~~~~~~L~~G~Y~v~et~a~~~~~~~~--~--i~V~~g~~-----~~~t 203 (298)
... ............+..+.|.+++...|.++.... . +....... ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T 3kpt_A 166 VKIDGAEVNANVVEVAIEGQKVTATVKDFTKMDGKKEFHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEKESKPVV 245 (355)
T ss_dssp EEETTEECCTTTEEEEEETTEEEEEECCSGGGTTCCEEEEEEEEEECTTCCTTCCEEECCEEEEECTTCCEEEEECCCEE
T ss_pred EEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEECCCCEEEEECCCCEEEEEEEEEEE
T ss_conf 77527653001588832686798986202333463234444127988733665030344307897357603555666678
Q ss_pred EEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCE----------EEECCCCEEECCCCCEEEEEEEECCCCEEEE----
Q ss_conf 99345238999983478863276089998389979----------7421252121244870289999538824677----
Q gi|254780160|r 204 IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT----------VGESANASPSMVLSEGDYTVIARNKERNYSR---- 269 (298)
Q Consensus 204 v~~~~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~----------vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~---- 269 (298)
.....+.+.+.+++..++++|+||.|.|++.+|.. +++.+|.+.+.+|++|+|+|.+..+|.+|..
T Consensus 246 ~~~~~g~~~~~K~d~~~~~~L~Ga~F~l~~~~g~~v~~~~~~~t~~Td~~G~~~~~~L~~G~Y~l~EtkaP~GY~~~~~~ 325 (355)
T 3kpt_A 246 VIPTTGIIELTKIDSANKNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTK 325 (355)
T ss_dssp EEECEEEEEEEEEETTTCCBCSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEEECCEEECTTCCE
T ss_pred EEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCCEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 86741524799974888830188589999179999950574768998999889989998935999999789974357764
Q ss_pred --------EEEEEECCC-CEEEEEEECH
Q ss_conf --------799972885-0489997410
Q gi|254780160|r 270 --------EFSVLTGKS-TIVEVLMRQK 288 (298)
Q Consensus 270 --------~ftV~~g~~-~~veV~~~~~ 288 (298)
++.|...++ ..+++.+.++
T Consensus 326 ~~y~~~~~~i~~~i~~~~~~~~~t~~n~ 353 (355)
T 3kpt_A 326 TSYQLLKDPIDVKISENNQTVKLTIENN 353 (355)
T ss_dssp EECCCCCSCEEEECBTTBCEEEEEEEEC
T ss_pred CCEEECCCEEEEEEEECCEEEEEEEEEC
T ss_conf 4459749608999951992999999957