Query gi|254780160|ref|YP_003064573.1| hypothetical protein CLIBASIA_00215 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 298
No_of_seqs 193 out of 319
Neff 8.3
Searched_HMMs 13730
Date Mon May 23 02:13:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780160.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h8la1 b.3.2.1 (A:305-383) Ca 98.4 2.5E-07 1.8E-11 62.4 7.2 75 211-286 2-77 (79)
2 d1nkga1 b.3.1.2 (A:251-337) Rh 98.1 2.9E-06 2.1E-10 55.6 6.4 80 208-288 7-87 (87)
3 d1vlfn1 b.3.5.1 (N:196-274) Tr 97.7 0.00013 9.2E-09 45.0 9.1 61 220-281 11-74 (79)
4 d1uwya1 b.3.2.1 (A:297-403) Ca 97.7 6.3E-05 4.6E-09 46.9 6.9 65 212-278 3-70 (107)
5 d1nkga1 b.3.1.2 (A:251-337) Rh 97.6 0.00017 1.2E-08 44.2 7.8 69 40-114 9-78 (87)
6 d1h8la1 b.3.2.1 (A:305-383) Ca 97.4 0.00052 3.8E-08 41.0 9.0 69 42-117 3-73 (79)
7 d1uwya1 b.3.2.1 (A:297-403) Ca 96.8 0.0023 1.7E-07 36.8 6.9 67 42-113 3-70 (107)
8 d1vlfn1 b.3.5.1 (N:196-274) Tr 96.4 0.021 1.5E-06 30.7 10.0 45 50-97 12-56 (79)
9 d1cwva1 b.1.14.1 (A:503-596) I 95.6 0.054 3.9E-06 28.0 9.5 72 38-110 19-93 (94)
10 d1xpna_ b.3.7.1 (A:) Hypotheti 94.1 0.058 4.2E-06 27.7 5.8 23 238-260 111-133 (170)
11 d1f00i1 b.1.14.1 (I:658-752) I 85.3 0.8 5.8E-05 20.4 6.7 62 38-101 20-83 (95)
12 d2burb1 b.3.6.1 (B:303-540) Pr 84.5 0.87 6.3E-05 20.1 7.0 59 35-93 72-147 (238)
13 d3pccm_ b.3.6.1 (M:) Protocate 84.4 0.88 6.4E-05 20.1 6.5 59 35-93 74-149 (236)
14 d1s9aa_ b.3.6.1 (A:) Chlorocat 84.2 0.89 6.5E-05 20.1 6.5 59 35-93 99-170 (256)
15 d1dmha_ b.3.6.1 (A:) Catechol 79.8 1.3 9.5E-05 19.0 6.9 59 35-93 128-200 (309)
16 d3pcca_ b.3.6.1 (A:) Protocate 78.0 1.5 0.00011 18.7 5.8 58 35-92 45-115 (200)
17 d2b59b2 b.3.2.2 (B:8-103) Cell 74.8 1.8 0.00013 18.1 5.4 24 73-96 37-62 (96)
18 d1nqja_ b.23.2.1 (A:) Class 1 74.5 1.8 0.00013 18.1 8.8 11 250-260 76-86 (101)
19 d2bura1 b.3.6.1 (A:4-200) Prot 69.8 2.3 0.00017 17.4 6.0 58 35-92 42-117 (202)
20 d1f86a_ b.3.4.1 (A:) Transthyr 63.4 3.1 0.00022 16.6 5.9 55 40-95 4-64 (115)
21 d1oo2a_ b.3.4.1 (A:) Transthyr 62.7 3.2 0.00023 16.5 6.1 56 39-95 4-65 (116)
22 d1ix2a_ b.1.18.17 (A:) Copper 58.0 3.8 0.00028 16.0 3.8 25 247-271 70-97 (102)
23 d1cwva2 b.1.14.1 (A:597-692) I 55.4 4.2 0.00031 15.7 8.1 58 39-99 24-83 (96)
24 d1d2oa1 b.3.5.1 (A:535-624) B 55.1 4.3 0.00031 15.7 7.8 49 138-187 20-76 (90)
25 d1d2oa2 b.3.5.1 (A:625-721) B 48.9 5.3 0.00039 15.1 10.6 64 126-189 5-80 (97)
26 d1cwva3 b.1.14.1 (A:693-795) I 39.4 7.4 0.00054 14.1 7.9 58 38-98 26-87 (103)
27 d2d7pa1 b.1.18.10 (A:8-106) Fi 38.8 7.6 0.00055 14.1 6.4 26 253-278 69-95 (99)
28 d2eyqa1 b.34.18.1 (A:466-545) 33.1 9.3 0.00068 13.5 3.6 45 84-128 10-54 (80)
29 d1df0a2 b.14.1.1 (A:356-514) C 31.8 9.8 0.00071 13.3 4.1 24 250-273 121-144 (159)
30 d1qfha2 b.1.18.10 (A:750-857) 25.7 12 0.00091 12.7 6.3 11 88-98 65-75 (108)
31 d1qxpa3 b.14.1.1 (A:356-514) C 24.4 13 0.00096 12.5 4.2 12 250-261 122-133 (159)
32 d3bwud1 b.167.1.1 (D:2-122) Ou 23.2 14 0.001 12.4 3.9 11 86-96 27-37 (121)
33 d2j3sa2 b.1.18.10 (A:2149-2236 20.9 15 0.0011 12.1 5.3 27 252-278 58-85 (88)
No 1
>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Probab=98.45 E-value=2.5e-07 Score=62.44 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=62.8
Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCEEEEEEEECCCC-EEEEEEEEEECCCCEEEEEEE
Q ss_conf 8999983478863276089998389979742125212124487028999953882-467779997288504899974
Q gi|254780160|r 211 ITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKER-NYSREFSVLTGKSTIVEVLMR 286 (298)
Q Consensus 211 ~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~-~y~~~ftV~~g~~~~veV~~~ 286 (298)
+..++.+..+|+||++|.+.+.+....+.++.+|.|. ..|+||+|++.++..++ ...+.+.|..++...+++.|+
T Consensus 2 I~G~V~d~~tg~pi~~a~V~v~~~~~~~~Td~~G~f~-~~l~~G~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~ 77 (79)
T d1h8la1 2 IWGFVLDATDGRGILNATISVADINHPVTTYKDGDYW-RLLVQGTYKVTASARGYDPVTKTVEVDSKGGVQVNFTLS 77 (79)
T ss_dssp EEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEE-ECCCSEEEEEEEECTTBCCEEEEEEECSSCEEECCEEEC
T ss_pred CEEEEEECCCCCCCCCEEEEEECCCCCEEECCCCCEE-EEEECCCEEEEEEEEEECCEEEEEEECCCCEEEEEEEEC
T ss_conf 5999997999998487299981750117956878799-996066189999997766399999997898599999986
No 2
>d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]}
Probab=98.11 E-value=2.9e-06 Score=55.56 Aligned_cols=80 Identities=18% Similarity=0.089 Sum_probs=56.2
Q ss_pred CCEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCEEEEEEEECCCCE-EEEEEEEEECCCCEEEEEEE
Q ss_conf 52389999834788632760899983899797421252121244870289999538824-67779997288504899974
Q gi|254780160|r 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERN-YSREFSVLTGKSTIVEVLMR 286 (298)
Q Consensus 208 ~~~~~~~~v~~~~G~~l~ga~~~i~~~~g~~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~-y~~~ftV~~g~~~~veV~~~ 286 (298)
.|.+..++.+.. +.+++++.+.+........++.+|.|.+.+||||+|.+.++..++. .+++++|.+|++..+++.+.
T Consensus 7 ~GtvsG~V~~~~-~~~~~~v~v~~~~~~~~~~Td~~G~f~i~~l~~G~Y~l~v~~~Gy~~~~~~v~v~~g~t~~~ni~~s 85 (87)
T d1nkga1 7 RGKVAGTASGAD-SSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVTVSAGSTTTKNISGS 85 (87)
T ss_dssp CBEEEEEEESSC-TTSCEEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEEECTTCEEECCEECC
T ss_pred EEEEEEEEECCC-CCCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEEE
T ss_conf 789999997998-8734579999488288999289886998266788789999992651000017983997799999830
Q ss_pred CH
Q ss_conf 10
Q gi|254780160|r 287 QK 288 (298)
Q Consensus 287 ~~ 288 (298)
.|
T Consensus 86 vk 87 (87)
T d1nkga1 86 VK 87 (87)
T ss_dssp CC
T ss_pred CC
T ss_conf 39
No 3
>d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]}
Probab=97.72 E-value=0.00013 Score=44.99 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=43.2
Q ss_pred CCCCCCCEEEEEECCCCC---EEEECCCCEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCEE
Q ss_conf 886327608999838997---97421252121244870289999538824677799972885048
Q gi|254780160|r 220 GGEAVADTAWSILTASGD---TVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIV 281 (298)
Q Consensus 220 ~G~~l~ga~~~i~~~~g~---~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~y~~~ftV~~g~~~~v 281 (298)
.|+++++|.+.|.+.+.. .+++.+|.|.+.+|+||+|.+.++..++.... ..+....+.++
T Consensus 11 ~G~~v~gA~V~L~~~~~~v~~t~Td~~G~F~f~~l~~G~Y~l~is~~Gy~~~~-~~v~~~~~vdL 74 (79)
T d1vlfn1 11 QGDCFEGAKVVLKSGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGKSYSD-TVVIDDKSVDL 74 (79)
T ss_dssp TTEECTTCEEEEEETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTEEEEE-EEEESSSCEEE
T ss_pred CCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCEE-EEEECCCCCEE
T ss_conf 79225562999987997697669889985999726997789999985043101-47822784338
No 4
>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.67 E-value=6.3e-05 Score=46.94 Aligned_cols=65 Identities=6% Similarity=0.013 Sum_probs=34.6
Q ss_pred EEEEEECCCCCCCCCEEEEEECCCCC--EEEECCCCEEECCCCCEEEEEEEECCCCE-EEEEEEEEECCC
Q ss_conf 99998347886327608999838997--97421252121244870289999538824-677799972885
Q gi|254780160|r 212 TFKLVSEMGGEAVADTAWSILTASGD--TVGESANASPSMVLSEGDYTVIARNKERN-YSREFSVLTGKS 278 (298)
Q Consensus 212 ~~~~v~~~~G~~l~ga~~~i~~~~g~--~vt~~~G~~~~~~L~~G~Y~v~a~~~~~~-y~~~ftV~~g~~ 278 (298)
.+++.| ..|+||++|.+.|.+.+.. ..++.+|.|.. .|++|.|++.++..++. ..+.+.|..++.
T Consensus 3 ~G~V~D-~~g~pi~~A~V~i~~~~~~~~~~td~~G~f~~-~~~~g~Y~l~vs~~Gy~~~~~~v~v~~~~~ 70 (107)
T d1uwya1 3 KGQVFD-QNGNPLPNVIVEVQDRKHICPYRTNKYGEYYL-LLLPGSYIINVTVPGHDPHITKVIIPEKSQ 70 (107)
T ss_dssp EEEEEC-TTSCBCCSCEEEETTCCCSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSCCEEEEEEECSSCS
T ss_pred EEEEEC-CCCCCCCCEEEEEECCCCCCEEECCHHHEEEE-ECCCCCEEEEEEEEEEEEEEEEEEECCCCC
T ss_conf 899988-99999685799997220462463401401463-048865799999998510899999978982
No 5
>d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]}
Probab=97.56 E-value=0.00017 Score=44.17 Aligned_cols=69 Identities=17% Similarity=0.146 Sum_probs=31.9
Q ss_pred EEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEE-CCCCCEEEEEEECCCCE
Q ss_conf 9999986887753467599999538887620588982468566302267218999961-57775278998068613
Q gi|254780160|r 40 TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEKN 114 (298)
Q Consensus 40 ~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~-g~~~~~~~vtV~~~~~~ 114 (298)
+++.+.++....++.++. |+.. + .....+|+++|.+.+.+|+||+|.|.+++ |+...++.++|..++..
T Consensus 9 tvsG~V~~~~~~~~~~v~--v~~~--~--~~~~~~Td~~G~f~i~~l~~G~Y~l~v~~~Gy~~~~~~v~v~~g~t~ 78 (87)
T d1nkga1 9 KVAGTASGADSSMDWVVH--WYND--A--AQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVTVSAGSTT 78 (87)
T ss_dssp EEEEEEESSCTTSCEEEE--EECS--S--CEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEEECTTCEE
T ss_pred EEEEEEECCCCCCCCEEE--EEEC--C--CEEEEEECCCCCEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCEE
T ss_conf 999999799887345799--9948--8--28899928988699826678878999999265100001798399779
No 6
>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Probab=97.43 E-value=0.00052 Score=41.00 Aligned_cols=69 Identities=20% Similarity=0.085 Sum_probs=40.2
Q ss_pred EEEECC-CCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEE-CCCCCEEEEEEECCCCEEEE
Q ss_conf 999868-87753467599999538887620588982468566302267218999961-57775278998068613678
Q gi|254780160|r 42 EARLTE-NSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEKNQKQ 117 (298)
Q Consensus 42 ~a~~~~-~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~-g~~~~~~~vtV~~~~~~~~~ 117 (298)
+.+..+ +.+.++.||...+ .+. .....|+.+|.+ ...|+||.|.|++++ ||......++|..++.....
T Consensus 3 ~G~V~d~~tg~pi~~a~V~v----~~~--~~~~~Td~~G~f-~~~l~~G~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~ 73 (79)
T d1h8la1 3 WGFVLDATDGRGILNATISV----ADI--NHPVTTYKDGDY-WRLLVQGTYKVTASARGYDPVTKTVEVDSKGGVQVN 73 (79)
T ss_dssp EEEEEETTTCSBCTTCEEEE----TTE--EEEEECCTTSEE-EECCCSEEEEEEEECTTBCCEEEEEEECSSCEEECC
T ss_pred EEEEEECCCCCCCCCEEEEE----ECC--CCCEEECCCCCE-EEEEECCCEEEEEEEEEECCEEEEEEECCCCEEEEE
T ss_conf 99999799999848729998----175--011795687879-999606618999999776639999999789859999
No 7
>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.77 E-value=0.0023 Score=36.84 Aligned_cols=67 Identities=19% Similarity=0.342 Sum_probs=41.5
Q ss_pred EEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEE-CCCCCEEEEEEECCCC
Q ss_conf 99986887753467599999538887620588982468566302267218999961-5777527899806861
Q gi|254780160|r 42 EARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEK 113 (298)
Q Consensus 42 ~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~-g~~~~~~~vtV~~~~~ 113 (298)
+.+..+..+.+++||..+|... ......+++.+| ..+..|++|+|.|.+++ ||...++.+.+..+..
T Consensus 3 ~G~V~D~~g~pi~~A~V~i~~~----~~~~~~~td~~G-~f~~~~~~g~Y~l~vs~~Gy~~~~~~v~v~~~~~ 70 (107)
T d1uwya1 3 KGQVFDQNGNPLPNVIVEVQDR----KHICPYRTNKYG-EYYLLLLPGSYIINVTVPGHDPHITKVIIPEKSQ 70 (107)
T ss_dssp EEEEECTTSCBCCSCEEEETTC----CCSSCCBCCTTC-EEEECCCSEEEEEEEECSSSCCEEEEEEECSSCS
T ss_pred EEEEECCCCCCCCCEEEEEECC----CCCCEEECCHHH-EEEEECCCCCEEEEEEEEEEEEEEEEEEECCCCC
T ss_conf 8999889999968579999722----046246340140-1463048865799999998510899999978982
No 8
>d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]}
Probab=96.43 E-value=0.021 Score=30.68 Aligned_cols=45 Identities=16% Similarity=0.107 Sum_probs=27.5
Q ss_pred CCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEEE
Q ss_conf 753467599999538887620588982468566302267218999961
Q gi|254780160|r 50 TSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF 97 (298)
Q Consensus 50 ~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~~L~pG~Y~v~~s~ 97 (298)
+.+++||...|+++ +.. -...+|+++|.+.+.+|+||+|.|.+++
T Consensus 12 G~~v~gA~V~L~~~--~~~-v~~t~Td~~G~F~f~~l~~G~Y~l~is~ 56 (79)
T d1vlfn1 12 GDCFEGAKVVLKSG--GKE-VASAETNFFGEFKFDALDNGEYTVEIDA 56 (79)
T ss_dssp TEECTTCEEEEEET--TEE-EEEEECCTTSEEEEEEECSEEEEEEEEE
T ss_pred CCCCCCCEEEEECC--CCE-EEEEEECCCCCEEEEECCCCCEEEEEEE
T ss_conf 92255629999879--976-9766988998599972699778999998
No 9
>d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}
Probab=95.62 E-value=0.054 Score=27.99 Aligned_cols=72 Identities=13% Similarity=0.028 Sum_probs=43.6
Q ss_pred EEEEEEEECCCCCCCCCCEEEEEEECCCC-CCCEEEEEEECCCCEEEE--CCCCCEEEEEEEECCCCCEEEEEEEC
Q ss_conf 27999998688775346759999953888-762058898246856630--22672189999615777527899806
Q gi|254780160|r 38 RITCEARLTENSTSIDSGVSWHIFDSISN-KKNTLSTTKKIIGGKVSF--DLFPGDYLISASFGHVGVVKKITVSS 110 (298)
Q Consensus 38 ~i~l~a~~~~~~~~~~~G~~~~vy~~~~~-~~g~~~~tt~~~G~~~~~--~L~pG~Y~v~~s~g~~~~~~~vtV~~ 110 (298)
..+|++.+.+..++++.|..... ...++ .......+|+.+|.+... ...+|.|.+.++.+.......+++.+
T Consensus 19 ~~t~tatv~D~~gnpv~g~~V~f-~~~~~~~~~~~~~~Td~~G~a~v~ltst~aG~~~VtAt~~g~~~s~~vtFva 93 (94)
T d1cwva1 19 AITVEFTVADFEGKPLAGQEVVI-TTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQSVDTHFVK 93 (94)
T ss_dssp CEEEEEEEECTTSCBCCSCEEEE-ECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTEEEEEEEEEEC
T ss_pred CEEEEEEEECCCCCCCCCCEEEE-EECCCCEEECCEEEECCCEEEEEEEEECCCEEEEEEEEECCCCCCEEEEEEC
T ss_conf 19999999949989968989999-9889958803436989998999999957866899999999836758999968
No 10
>d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=94.07 E-value=0.058 Score=27.74 Aligned_cols=23 Identities=9% Similarity=0.141 Sum_probs=12.9
Q ss_pred EEEECCCCEEECCCCCEEEEEEE
Q ss_conf 97421252121244870289999
Q gi|254780160|r 238 TVGESANASPSMVLSEGDYTVIA 260 (298)
Q Consensus 238 ~vt~~~G~~~~~~L~~G~Y~v~a 260 (298)
.++|.+|.|.+.+||+|+|.+++
T Consensus 111 T~cD~~G~F~F~gLp~G~Yyv~~ 133 (170)
T d1xpna_ 111 ATTDQNGRFDFDHIPNGTYYISS 133 (170)
T ss_dssp EEECSSCEEEECSCCSEEEEEEE
T ss_pred EEECCCCCEEECCCCCCCEEEEE
T ss_conf 58658773777578996589999
No 11
>d1f00i1 b.1.14.1 (I:658-752) Intimin {Escherichia coli [TaxId: 562]}
Probab=85.30 E-value=0.8 Score=20.38 Aligned_cols=62 Identities=19% Similarity=0.177 Sum_probs=36.2
Q ss_pred EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEE--CCCCCEEEEEEEECCCC
Q ss_conf 27999998688775346759999953888762058898246856630--22672189999615777
Q gi|254780160|r 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSF--DLFPGDYLISASFGHVG 101 (298)
Q Consensus 38 ~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~--~L~pG~Y~v~~s~g~~~ 101 (298)
.+++++++.++ ++++.|.... |....+.......+|+++|.+... ...+|.+.|.++.+...
T Consensus 20 ~~t~tatv~D~-gnpv~g~~V~-~~~~~g~l~~~~~~Td~~G~at~~ltst~aG~~tVtA~v~~~~ 83 (95)
T d1f00i1 20 AITYTVKVMKG-DKPVSNQEVT-FTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSDVA 83 (95)
T ss_dssp CEEEEEEEEET-TEECTTCEEE-EEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETTCC
T ss_pred EEEEEEEEEEC-CCCCCCCEEE-EEECCCCEECCEEEECCCCEEEEEEECCCCEEEEEEEEECCCC
T ss_conf 69999999989-9606884899-9977871812236978996999999927856999999995876
No 12
>d2burb1 b.3.6.1 (B:303-540) Protocatechuate-3,4-dioxygenase, beta chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]}
Probab=84.49 E-value=0.87 Score=20.15 Aligned_cols=59 Identities=10% Similarity=0.047 Sum_probs=43.8
Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCC-----------------CEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf 0232799999868877534675999995388876-----------------2058898246856630226721899
Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKK-----------------NTLSTTKKIIGGKVSFDLFPGDYLI 93 (298)
Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~-----------------g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298)
.++.|.++.++.+..+.++.|+...|+..+...- +.=...|+++|.+.+.-+.||-|..
T Consensus 72 ~Ge~i~v~G~V~D~~g~Pv~~A~VEiWQada~G~Y~~~~d~~~~~~d~~f~grGr~~TD~~G~y~F~TI~Pg~Yp~ 147 (238)
T d2burb1 72 IGERVIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW 147 (238)
T ss_dssp SSCEEEEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 7477999999999999897884788982489962378665556766777315889986999849999579845477
No 13
>d3pccm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]}
Probab=84.36 E-value=0.88 Score=20.11 Aligned_cols=59 Identities=12% Similarity=0.052 Sum_probs=42.6
Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC-----------------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf 023279999986887753467599999538887-----------------62058898246856630226721899
Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK-----------------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298)
Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~-----------------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298)
.++.|.++.++.+..+.++.|+...|+..+... .+.=...|+++|.+.+.-+.||.|..
T Consensus 74 ~Ge~i~v~GrV~D~~g~Pv~~a~VEIWQana~G~Y~~~~d~~~~~~d~~f~grGr~~Td~~G~y~F~TI~PG~Yp~ 149 (236)
T d3pccm_ 74 IGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPW 149 (236)
T ss_dssp SSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC
T ss_conf 8777999999987999895885789985699931888756555666876422799972899849999608967666
No 14
>d1s9aa_ b.3.6.1 (A:) Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus [TaxId: 37919]}
Probab=84.24 E-value=0.89 Score=20.08 Aligned_cols=59 Identities=14% Similarity=0.110 Sum_probs=37.3
Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCC-------------CCCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf 02327999998688775346759999953888-------------762058898246856630226721899
Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISN-------------KKNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298)
Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~-------------~~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298)
.++.+.++.+..+..+.++.||...|+..+.. -.++=...|+++|.+.+.-+.||.|.+
T Consensus 99 ~G~~l~v~G~V~D~~g~Pi~gA~veiWqad~~G~Y~~~~~~~~~~~~~rG~~~Td~~G~y~F~Ti~P~~Y~i 170 (256)
T d1s9aa_ 99 PGDRMRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEI 170 (256)
T ss_dssp SSCEEEEEEEEEETTSCBCTTCEEEEECCCTTSCCTTSCTTSCSSCCSEEEECCCTTSEEEEEEECCCCEEC
T ss_pred CCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC
T ss_conf 987899999999799988357689998069842114556678877563237876899729999976677677
No 15
>d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=79.76 E-value=1.3 Score=19.03 Aligned_cols=59 Identities=8% Similarity=0.071 Sum_probs=38.5
Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCC--------------CCEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf 023279999986887753467599999538887--------------62058898246856630226721899
Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNK--------------KNTLSTTKKIIGGKVSFDLFPGDYLI 93 (298)
Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~--------------~g~~~~tt~~~G~~~~~~L~pG~Y~v 93 (298)
.++.+.++.++.+..+.+++|+...|+..+... .++=...|+++|.+.+.-+.||.|-+
T Consensus 128 ~G~~l~v~G~V~D~~G~Pi~~A~veiWqad~~G~Y~~~d~~~~~~~~~~rG~~~Td~~G~y~F~TI~P~~Y~i 200 (309)
T d1dmha_ 128 NGHTLILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 200 (309)
T ss_dssp TCCEEEEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCC
T ss_conf 9768999999998999886783688881688830057688777876676418930899759999971688777
No 16
>d3pcca_ b.3.6.1 (A:) Protocatechuate-3,4-dioxygenase, alpha chain {Pseudomonas putida [TaxId: 303]}
Probab=78.05 E-value=1.5 Score=18.70 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=37.7
Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCC------------CEEEE-EEECCCCEEEECCCCCEEE
Q ss_conf 0232799999868877534675999995388876------------20588-9824685663022672189
Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKK------------NTLST-TKKIIGGKVSFDLFPGDYL 92 (298)
Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~------------g~~~~-tt~~~G~~~~~~L~pG~Y~ 92 (298)
.+..+.|+.++.+.+..++.||...|+..+.... +.-.. +++++|.+.+.-+.||-|.
T Consensus 45 ~G~~i~l~G~V~D~~g~Pi~~A~veiWqad~~G~Y~~~~~~~~~~~~~gr~~~t~~~G~~~f~TI~Pg~Y~ 115 (200)
T d3pcca_ 45 PGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVN 115 (200)
T ss_dssp SSCEEEEEEEEECTTSCBCTTCEEEEECCCTTSCCCCBCCTTSSBCSEEEEECCSSSCEEEEEEECCCCEE
T ss_pred CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCC
T ss_conf 99889999999878998957539999965998504257777656576243566399974999986486523
No 17
>d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]}
Probab=74.79 E-value=1.8 Score=18.13 Aligned_cols=24 Identities=13% Similarity=0.007 Sum_probs=9.6
Q ss_pred EEEECCCCEEEECCCCCE--EEEEEE
Q ss_conf 898246856630226721--899996
Q gi|254780160|r 73 TTKKIIGGKVSFDLFPGD--YLISAS 96 (298)
Q Consensus 73 ~tt~~~G~~~~~~L~pG~--Y~v~~s 96 (298)
.+|+++|-+...++|.|. |+|+.+
T Consensus 37 ~vTD~nGYFEI~gvp~~~~~~Tl~Is 62 (96)
T d2b59b2 37 AVTDANGYFEITGVPANASGYTLKIS 62 (96)
T ss_dssp EECCTTSEEEEEEECCEEEEEEEEEE
T ss_pred EEECCCCEEEEECCCCCCCCEEEEEC
T ss_conf 77356763897057589730599981
No 18
>d1nqja_ b.23.2.1 (A:) Class 1 collagenase {Bacteria (Clostridium histolyticum) [TaxId: 1498]}
Probab=74.49 E-value=1.8 Score=18.09 Aligned_cols=11 Identities=27% Similarity=0.585 Sum_probs=4.6
Q ss_pred CCCCEEEEEEE
Q ss_conf 44870289999
Q gi|254780160|r 250 VLSEGDYTVIA 260 (298)
Q Consensus 250 ~L~~G~Y~v~a 260 (298)
.|.+|+|.+.+
T Consensus 76 ~~~~GtYyi~V 86 (101)
T d1nqja_ 76 KLRPGKYYLLV 86 (101)
T ss_dssp EECSEEEEEEE
T ss_pred ECCCEEEEEEE
T ss_conf 45881799999
No 19
>d2bura1 b.3.6.1 (A:4-200) Protocatechuate-3,4-dioxygenase, alpha chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]}
Probab=69.77 E-value=2.3 Score=17.39 Aligned_cols=58 Identities=19% Similarity=0.033 Sum_probs=37.4
Q ss_pred ECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCC-----------------CEEEEEEE-CCCCEEEECCCCCEEE
Q ss_conf 0232799999868877534675999995388876-----------------20588982-4685663022672189
Q gi|254780160|r 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKK-----------------NTLSTTKK-IIGGKVSFDLFPGDYL 92 (298)
Q Consensus 35 ~~~~i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~-----------------g~~~~tt~-~~G~~~~~~L~pG~Y~ 92 (298)
.++.+.|..++.+....++.|+...|+..+.... |.....++ ++|.+.+.-+.||.|.
T Consensus 42 ~G~~i~l~G~V~D~~g~Pi~~a~veiWqad~~G~Y~~~~~~~~~~~d~~f~g~~r~~t~~~~G~~~f~TI~Pg~Y~ 117 (202)
T d2bura1 42 QGQRIRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVP 117 (202)
T ss_dssp CSCEEEEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCCCCCTTCCCEEEEECCTTTCCEEEEEECCCCCB
T ss_pred CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCC
T ss_conf 8877999999988999896664999995587664356654455666754310788867479997999986055414
No 20
>d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.36 E-value=3.1 Score=16.59 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=24.6
Q ss_pred EEEEEECCCCCCCCCCEEEEEEECCCCCC--CEEEEEEECCCCEEEE----CCCCCEEEEEE
Q ss_conf 99999868877534675999995388876--2058898246856630----22672189999
Q gi|254780160|r 40 TCEARLTENSTSIDSGVSWHIFDSISNKK--NTLSTTKKIIGGKVSF----DLFPGDYLISA 95 (298)
Q Consensus 40 ~l~a~~~~~~~~~~~G~~~~vy~~~~~~~--g~~~~tt~~~G~~~~~----~L~pG~Y~v~~ 95 (298)
+.+...+..+.+ -+|+..+||....+.. --....|+++|....+ ++.+|.|.|.-
T Consensus 4 StHVLDt~~G~P-A~gv~V~L~~~~~~~~~~~i~~~~Td~dGRi~~~~~~~~~~~G~Y~l~F 64 (115)
T d1f86a_ 4 MVKVLDAVRGSP-AINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEI 64 (115)
T ss_dssp EEEEEETTTTEE-CTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEE
T ss_pred EEEEECCCCCCC-CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 388812898887-7898999999889997799999996799802676676667776799999
No 21
>d1oo2a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Gilthead seabream (Sparus aurata) [TaxId: 8175]}
Probab=62.66 E-value=3.2 Score=16.51 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=26.1
Q ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCCCE--EEEEEECCCCEEEE----CCCCCEEEEEE
Q ss_conf 79999986887753467599999538887620--58898246856630----22672189999
Q gi|254780160|r 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNT--LSTTKKIIGGKVSF----DLFPGDYLISA 95 (298)
Q Consensus 39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~--~~~tt~~~G~~~~~----~L~pG~Y~v~~ 95 (298)
|+.+...+..+.+ -+|+..+||....+.... ....|+++|....+ .+++|.|.|.-
T Consensus 4 iStHvLD~~~G~p-A~gv~V~L~~~~~~g~~~~i~~~~Td~dGRi~~~~~~~~~~~G~Yel~F 65 (116)
T d1oo2a_ 4 LMVKILDAVKGTP-AGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEF 65 (116)
T ss_dssp EEEEEEETTTTEE-CTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEE
T ss_pred CEEEEECCCCCCC-CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 3187804898982-7899899999889998189899997899868664674545680199999
No 22
>d1ix2a_ b.1.18.17 (A:) Copper resistance protein C (CopC, PcoC) {Escherichia coli [TaxId: 562]}
Probab=58.03 E-value=3.8 Score=16.00 Aligned_cols=25 Identities=20% Similarity=0.381 Sum_probs=14.3
Q ss_pred EECCCCCEEEEEE---EECCCCEEEEEE
Q ss_conf 2124487028999---953882467779
Q gi|254780160|r 247 PSMVLSEGDYTVI---ARNKERNYSREF 271 (298)
Q Consensus 247 ~~~~L~~G~Y~v~---a~~~~~~y~~~f 271 (298)
....|++|.|++. ...+++..+-.|
T Consensus 70 ~~~~l~~G~Y~V~wrv~s~DGH~~~G~~ 97 (102)
T d1ix2a_ 70 PREPLPAGTYRVDWRAVSSDTHPITGNY 97 (102)
T ss_dssp ESSCCCSEEEEEEEEECCTTCCCEEEEE
T ss_pred CCCCCCCCEEEEEEEEECCCCCEECCEE
T ss_conf 2677898229999999807898531579
No 23
>d1cwva2 b.1.14.1 (A:597-692) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}
Probab=55.42 E-value=4.2 Score=15.72 Aligned_cols=58 Identities=10% Similarity=-0.028 Sum_probs=28.0
Q ss_pred EEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEE--CCCCCEEEEEEEECC
Q ss_conf 7999998688775346759999953888762058898246856630--226721899996157
Q gi|254780160|r 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSF--DLFPGDYLISASFGH 99 (298)
Q Consensus 39 i~l~a~~~~~~~~~~~G~~~~vy~~~~~~~g~~~~tt~~~G~~~~~--~L~pG~Y~v~~s~g~ 99 (298)
.+|++.+.+..++++.|....+.. ..+... ..+++.+|.+... ...+|.+.+.+..+.
T Consensus 24 ~tlt~tv~D~~gnpv~g~~V~~~~-~~g~~~--~~tt~~~G~~t~~lts~~~G~~~vta~~~g 83 (96)
T d1cwva2 24 STITLELKDTYGDPQAGANVAFDT-TLGNMG--VITDHNDGTYSAPLTSTTLGVATVTVKVDG 83 (96)
T ss_dssp EEEEEECBBTTSCBCCSCCEEEEE-SSSEEC--CCEECSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred EEEEEEEECCCCCCCCCCEEEEEE-CCCCCC--CCEECCCCEEEEEEECCCCEEEEEEEEECC
T ss_conf 999999996999998999999996-688024--339999918999998788617999999988
No 24
>d1d2oa1 b.3.5.1 (A:535-624) B repeat unit of collagen binding surface protein (cna) {Staphylococcus aureus [TaxId: 1280]}
Probab=55.11 E-value=4.3 Score=15.69 Aligned_cols=49 Identities=12% Similarity=0.121 Sum_probs=26.3
Q ss_pred CCCCEEEEEEECCCCCEEEEE--EECCCCCEEEEECCC------CEEEEEEECCCCCE
Q ss_conf 775518999983897435667--505675135210676------17999961577854
Q gi|254780160|r 138 IVDDELTFSIYSNPNHKALLI--TDKVRSGTLVRLGTN------NYQITSHYGKYNAI 187 (298)
Q Consensus 138 ~~~~~~~f~i~~~~~~~~~~~--t~~~~~~~~~~L~~G------~Y~v~et~a~~~~~ 187 (298)
..+..+.|.||.++....... .++.-...+.+||.. .|.|.|..-+ +|.
T Consensus 20 ~RP~sV~v~L~~dg~~~~~~~l~~~n~W~~tf~~Lp~~d~G~~i~YtV~E~~V~-gY~ 76 (90)
T d1d2oa1 20 KRPEKVSVNLLANGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVK-DYT 76 (90)
T ss_dssp CCCSEEEEEEEETTEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCT-TEE
T ss_pred CCCCEEEEEEEECCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCC-CCE
T ss_conf 799769999998999920499757898189988987555996999999850559-809
No 25
>d1d2oa2 b.3.5.1 (A:625-721) B repeat unit of collagen binding surface protein (cna) {Staphylococcus aureus [TaxId: 1280]}
Probab=48.89 E-value=5.3 Score=15.06 Aligned_cols=64 Identities=8% Similarity=0.074 Sum_probs=34.0
Q ss_pred EEEEEEECCCC---CCCCCEEEEEEECCCCCEEEEE-EE--CCCCCEEEEECCC------CEEEEEEECCCCCEEE
Q ss_conf 79998615788---7775518999983897435667-50--5675135210676------1799996157785445
Q gi|254780160|r 126 IRLYSIYKPGS---PIVDDELTFSIYSNPNHKALLI-TD--KVRSGTLVRLGTN------NYQITSHYGKYNAIVS 189 (298)
Q Consensus 126 ~~~~~~~~~~~---~~~~~~~~f~i~~~~~~~~~~~-t~--~~~~~~~~~L~~G------~Y~v~et~a~~~~~~~ 189 (298)
+.+.++-.++. +..+..++|.||.++......+ .+ +.=...+.+||.- .|.|.|...+.+|...
T Consensus 5 i~V~K~W~d~~~~~~~rP~sV~v~L~~~g~~~~~~~~l~~~n~W~~~f~~Lpk~~~Gk~i~YtV~E~~~~~gY~~~ 80 (97)
T d1d2oa2 5 ATVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTH 80 (97)
T ss_dssp EEEEEEEESSTTSSSCCCSCEEEEEEETTEEEEEEEEESGGGTTEEEEEEEESEETTEECCEEEEECSCCTTEEEE
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEEEECCEECCCEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEE
T ss_conf 8999997699966787997699999989989034899758897689988988446998889999984789983999
No 26
>d1cwva3 b.1.14.1 (A:693-795) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}
Probab=39.40 E-value=7.4 Score=14.13 Aligned_cols=58 Identities=12% Similarity=0.005 Sum_probs=29.6
Q ss_pred EEEEEEEECCCCCCCCCCE--EEEEEECCCCCCCEEEEEEECCCCEEEE--CCCCCEEEEEEEEC
Q ss_conf 2799999868877534675--9999953888762058898246856630--22672189999615
Q gi|254780160|r 38 RITCEARLTENSTSIDSGV--SWHIFDSISNKKNTLSTTKKIIGGKVSF--DLFPGDYLISASFG 98 (298)
Q Consensus 38 ~i~l~a~~~~~~~~~~~G~--~~~vy~~~~~~~g~~~~tt~~~G~~~~~--~L~pG~Y~v~~s~g 98 (298)
..+|++.+.+..++++.|+ .|..-+ +.......+++.+|.+... .-.+|.+.|.+..+
T Consensus 26 ~~tlt~tv~D~~GNpv~g~~v~~~~~~---~~~~~~s~~td~~G~ytatltst~aG~~tVta~v~ 87 (103)
T d1cwva3 26 SSTLSFVPVDKNGHFISGMQGLSFTQN---GVPVSISPITEQPDSYTATVVGNSVGDVTITPQVD 87 (103)
T ss_dssp CEEEEEECBCTTSCBCCSCCSEEEEEE---ESCCEECCCEECSSCEEEEEECSSCEEEEEEEEET
T ss_pred EEEEEEEEECCCCCCCCCCEEEEEECC---CCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEC
T ss_conf 799999999589999678727899616---77542100747999899999814650799999999
No 27
>d2d7pa1 b.1.18.10 (A:8-106) Filamin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.84 E-value=7.6 Score=14.07 Aligned_cols=26 Identities=12% Similarity=0.239 Sum_probs=13.3
Q ss_pred CEEEEEEEECCCCEE-EEEEEEEECCC
Q ss_conf 702899995388246-77799972885
Q gi|254780160|r 253 EGDYTVIARNKERNY-SREFSVLTGKS 278 (298)
Q Consensus 253 ~G~Y~v~a~~~~~~y-~~~ftV~~g~~ 278 (298)
+|.|.+..+.++... -.+|.|.....
T Consensus 69 ~G~~~i~V~~~g~~I~gSPf~v~V~~~ 95 (99)
T d2d7pa1 69 NGVHSIDVKFNGAHIPGSPFKIRVGEQ 95 (99)
T ss_dssp CEEEEEEEEESSCBCTTCSEEEEECCC
T ss_pred CCCEEEEEEECCEECCCCCEEEEEECC
T ss_conf 872899999999999999999899672
No 28
>d2eyqa1 b.34.18.1 (A:466-545) Transcription-repair coupling factor, RRCF, middle domain {Escherichia coli [TaxId: 562]}
Probab=33.15 E-value=9.3 Score=13.49 Aligned_cols=45 Identities=13% Similarity=0.141 Sum_probs=26.2
Q ss_pred ECCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEE
Q ss_conf 022672189999615777527899806861367875136643799
Q gi|254780160|r 84 FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRL 128 (298)
Q Consensus 84 ~~L~pG~Y~v~~s~g~~~~~~~vtV~~~~~~~~~~~~~~ag~~~~ 128 (298)
.+|.+|+|.||+.+|-.-+..=..+..++.......+.-+++-.+
T Consensus 10 ~~L~~GD~VVH~dhGIG~y~GL~~~~~~g~~~e~l~leY~~~d~L 54 (80)
T d2eyqa1 10 AELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKL 54 (80)
T ss_dssp TTCCTTCEEEETTTEEEEEEEEEEEESSSCEEEEEEEECGGGCEE
T ss_pred HHCCCCCEEEECCCCEEEEEEEEEEECCCCCCCEEEEEECCCCEE
T ss_conf 758799999880259175232278512787785599998689959
No 29
>d1df0a2 b.14.1.1 (A:356-514) Calpain large subunit, middle domain (domain III) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}
Probab=31.77 E-value=9.8 Score=13.35 Aligned_cols=24 Identities=21% Similarity=0.502 Sum_probs=8.8
Q ss_pred CCCCEEEEEEEECCCCEEEEEEEE
Q ss_conf 448702899995388246777999
Q gi|254780160|r 250 VLSEGDYTVIARNKERNYSREFSV 273 (298)
Q Consensus 250 ~L~~G~Y~v~a~~~~~~y~~~ftV 273 (298)
.|+||.|.|+..--...-+.+|.+
T Consensus 121 ~L~pG~Y~IVPsT~~p~~~g~F~L 144 (159)
T d1df0a2 121 KLPPGEYVLVPSTFEPHKNGDFCI 144 (159)
T ss_dssp EECSEEEEEEEEESSSSCCEEEEE
T ss_pred EECCCCEEEEEEECCCCCEEEEEE
T ss_conf 718988899948448998762799
No 30
>d1qfha2 b.1.18.10 (A:750-857) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]}
Probab=25.66 E-value=12 Score=12.67 Aligned_cols=11 Identities=9% Similarity=0.329 Sum_probs=4.2
Q ss_pred CCEEEEEEEEC
Q ss_conf 72189999615
Q gi|254780160|r 88 PGDYLISASFG 98 (298)
Q Consensus 88 pG~Y~v~~s~g 98 (298)
+|.|.|.+.++
T Consensus 65 ~G~y~v~V~~~ 75 (108)
T d1qfha2 65 NGRFSTGVKLN 75 (108)
T ss_dssp SEEEEEEEEET
T ss_pred CEEEEEEEEEC
T ss_conf 62699999999
No 31
>d1qxpa3 b.14.1.1 (A:356-514) Calpain large subunit, middle domain (domain III) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}
Probab=24.44 E-value=13 Score=12.52 Aligned_cols=12 Identities=33% Similarity=0.695 Sum_probs=5.4
Q ss_pred CCCCEEEEEEEE
Q ss_conf 448702899995
Q gi|254780160|r 250 VLSEGDYTVIAR 261 (298)
Q Consensus 250 ~L~~G~Y~v~a~ 261 (298)
.|+||.|.|+..
T Consensus 122 ~l~pG~Y~IVPs 133 (159)
T d1qxpa3 122 RLPPGEYIVVPS 133 (159)
T ss_dssp ECCSEEEEEEEE
T ss_pred EECCCCEEEEEE
T ss_conf 968998999966
No 32
>d3bwud1 b.167.1.1 (D:2-122) Outer membrane usher protein FimD {Escherichia coli [TaxId: 562]}
Probab=23.20 E-value=14 Score=12.37 Aligned_cols=11 Identities=36% Similarity=0.634 Sum_probs=5.3
Q ss_pred CCCCEEEEEEE
Q ss_conf 26721899996
Q gi|254780160|r 86 LFPGDYLISAS 96 (298)
Q Consensus 86 L~pG~Y~v~~s 96 (298)
++||.|.|..-
T Consensus 27 ~~pG~Y~vdI~ 37 (121)
T d3bwud1 27 LPPGTYRVDIY 37 (121)
T ss_dssp SCSEEEEEEEE
T ss_pred CCCEEEEEEEE
T ss_conf 79838899999
No 33
>d2j3sa2 b.1.18.10 (A:2149-2236) Filamin b {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.86 E-value=15 Score=12.07 Aligned_cols=27 Identities=22% Similarity=0.270 Sum_probs=15.4
Q ss_pred CCEEEEEEEECCCCEE-EEEEEEEECCC
Q ss_conf 8702899995388246-77799972885
Q gi|254780160|r 252 SEGDYTVIARNKERNY-SREFSVLTGKS 278 (298)
Q Consensus 252 ~~G~Y~v~a~~~~~~y-~~~ftV~~g~~ 278 (298)
-+|+|.+..+.++... -.+|.|..+..
T Consensus 58 ~~G~h~i~V~~~g~~I~gSPf~v~V~p~ 85 (88)
T d2j3sa2 58 EMGTHTVSVKYKGQHVPGSPFQFTVGPL 85 (88)
T ss_dssp SCEEEEEEEEETTEECTTCSEEEEESCC
T ss_pred CCEEEEEEEEECCEECCCCCEEEEEECC
T ss_conf 8502999999999998998999898669
Done!