BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780160|ref|YP_003064573.1| hypothetical protein
CLIBASIA_00215 [Candidatus Liberibacter asiaticus str. psy62]
(298 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
Results from round 1
>gi|254780160|ref|YP_003064573.1| hypothetical protein CLIBASIA_00215 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039837|gb|ACT56633.1| hypothetical protein CLIBASIA_00215 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 298
Score = 608 bits (1568), Expect = e-172, Method: Compositional matrix adjust.
Identities = 298/298 (100%), Positives = 298/298 (100%)
Query: 1 MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI
Sbjct: 1 MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI
Sbjct: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH
Sbjct: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG
Sbjct: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT 298
ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT
Sbjct: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT 298
>gi|315122760|ref|YP_004063249.1| hypothetical protein CKC_05070 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496162|gb|ADR52761.1| hypothetical protein CKC_05070 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 301
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/294 (73%), Positives = 254/294 (86%), Gaps = 5/294 (1%)
Query: 4 SFSSYAKAEN---MHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
SF SYAK EN +HTTST +N++SKGKGK+++ AQ+I C+ARLTENS I+SGVSWH+
Sbjct: 6 SFPSYAKTENPSDIHTTSTS-SNDMSKGKGKKIIPAQKIICKARLTENSPFINSGVSWHV 64
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
FD+ NKK+TLST KKIIGG V +LFPGDYL+SASFGHVGVVK+ITV+ ++ +K F+
Sbjct: 65 FDTTLNKKDTLSTIKKIIGGIVYLELFPGDYLVSASFGHVGVVKRITVTPTKQIEKHTFV 124
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVR-LGTNNYQITS 179
NAGGIRLYSIYKP SPIVDDELTFSIYSNPN K L+I DKV SGTL+R LG+ NYQITS
Sbjct: 125 FNAGGIRLYSIYKPDSPIVDDELTFSIYSNPNQKPLMIADKVSSGTLIRLLGSTNYQITS 184
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV 239
HYGKYNA+VST+VKVE GK+IDVTIQNRAAK TFKLVSE GGEA+ADTAWSILTA GDTV
Sbjct: 185 HYGKYNAVVSTIVKVESGKVIDVTIQNRAAKTTFKLVSEAGGEAIADTAWSILTAGGDTV 244
Query: 240 GESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKN 293
GES +A PSM+LSEGDY VIARNKER YSREFSV TGK+ ++EV+M+QKR+DK+
Sbjct: 245 GESVHAFPSMILSEGDYVVIARNKERIYSREFSVTTGKNKVIEVIMKQKRVDKS 298
>gi|190891874|ref|YP_001978416.1| hypothetical protein RHECIAT_CH0002283 [Rhizobium etli CIAT 652]
gi|190697153|gb|ACE91238.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 365
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/273 (45%), Positives = 180/273 (65%), Gaps = 5/273 (1%)
Query: 21 LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGG 80
LN I+ G + + EA+LT + T ++ G+SW++F I+ L GG
Sbjct: 45 LNAFIAPGTAPEAAKLRDVAMEAKLTADGTPVEDGLSWYVFSPIAGTDGKLPLIASAKGG 104
Query: 81 KVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVD 140
+F L PGDY ++ SFG GV KK+TV + + KQV +L+AGG+ L ++ + I
Sbjct: 105 PAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVDKQVMVLDAGGLLLNAVSGTDARIRP 164
Query: 141 DELTFSIYS----NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEP 196
DEL+FSIYS + + L++ D V T+VRL Y I S YG NA++ ++VE
Sbjct: 165 DELSFSIYSSEVRDDGERGLVVAD-VSPNTVVRLNAGTYHIVSEYGNVNAVIRADIQVEA 223
Query: 197 GKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDY 256
GK+ + TIQ+RAA+ITFKLVSE GGEA+ADTAWSILTA+GD+VGES +A P+MVL+EG+Y
Sbjct: 224 GKLTEATIQHRAAQITFKLVSEAGGEAIADTAWSILTAAGDSVGESVSAFPTMVLAEGEY 283
Query: 257 TVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
+ +ARNK++ Y R+F+V+ GK+T VEVLM+ ++
Sbjct: 284 SAVARNKDKIYQRDFTVVAGKNTDVEVLMKDQQ 316
>gi|327188319|gb|EGE55537.1| hypothetical protein RHECNPAF_910012 [Rhizobium etli CNPAF512]
Length = 365
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/273 (45%), Positives = 180/273 (65%), Gaps = 5/273 (1%)
Query: 21 LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGG 80
LN I+ G + + EA+LT + T ++ G+SW++F I+ L GG
Sbjct: 45 LNAFIAPGTAPDAAKLRDVAMEAKLTADGTPVEDGLSWYVFSPIAGTDGKLPLIASAKGG 104
Query: 81 KVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVD 140
+F L PGDY ++ SFG GV KK+TV + + KQV +L+AGG+ L ++ + I
Sbjct: 105 PAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVNKQVMVLDAGGLLLNAVSGTDARIRP 164
Query: 141 DELTFSIYS----NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEP 196
DEL+FSIYS + + L++ D V T+VRL Y I S YG NA++ ++VE
Sbjct: 165 DELSFSIYSSEVRDDGERGLVVAD-VSPNTVVRLNAGTYHIVSEYGNVNAVIRADIQVEA 223
Query: 197 GKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDY 256
GK+ + TIQ+RAA+ITFKLVSE GGEA+ADTAWSILTA+GD+VGES +A P+MVL+EG+Y
Sbjct: 224 GKLTEATIQHRAAQITFKLVSEAGGEAIADTAWSILTAAGDSVGESVSAFPTMVLAEGEY 283
Query: 257 TVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
+ +ARNK++ Y R+F+V+ GK+T VEVLM+ ++
Sbjct: 284 SAVARNKDKIYQRDFTVVAGKNTDVEVLMKDQQ 316
>gi|86357811|ref|YP_469703.1| hypothetical protein RHE_CH02195 [Rhizobium etli CFN 42]
gi|86281913|gb|ABC90976.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 367
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/284 (44%), Positives = 185/284 (65%), Gaps = 7/284 (2%)
Query: 12 ENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKN 69
+ + +TS + LN I+ G + I EA+LT + T ++ G+SW++F I+
Sbjct: 34 KQLDSTSKMPKLNAFIAPGAAPEGAKLRDIEMEAKLTADGTPVEDGLSWYVFSPIAGTDG 93
Query: 70 TLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLY 129
L GG +F L PGDY ++ SFG GV KK+TV + + KQV +L+AGG+ L
Sbjct: 94 KLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVDKQVMVLDAGGLLLN 153
Query: 130 SIYKPGSPIVDDELTFSIYS----NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYN 185
++ + I D+L+FSIYS + + L++ D V T+VRL Y I S YG N
Sbjct: 154 AVSGTDARIRPDQLSFSIYSSEVRDDGERGLVVAD-VSPNTVVRLNAGTYHIVSEYGSVN 212
Query: 186 AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANA 245
AI+ ++VE GK+ + TIQ+RAA++TFKLVSE GGEA+ADTAWSILTA+GD+VGES +A
Sbjct: 213 AIIRADIQVEAGKLTEATIQHRAAQMTFKLVSEAGGEAIADTAWSILTAAGDSVGESVSA 272
Query: 246 SPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
P+MVL+EG+Y+ +ARNK++ Y R+F+V+ G++T VEVLM+ +
Sbjct: 273 FPTMVLAEGEYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQE 316
>gi|209549438|ref|YP_002281355.1| hypothetical protein Rleg2_1844 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535194|gb|ACI55129.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 366
Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 188/289 (65%), Gaps = 7/289 (2%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSI 64
++ + + + +TS + L+ I+ G V + + EA+LT + T ++ G+SW++F I
Sbjct: 29 AFKEFKQLESTSKMPKLDAFIAPGTAPEGVKLRDVPMEAKLTADGTPVEEGLSWYVFSPI 88
Query: 65 SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG 124
+ L GG +F L PGDY ++ SFG GV KK+TV + KQV +L+AG
Sbjct: 89 AGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGAVDKQVMVLDAG 148
Query: 125 GIRLYSIYKPGSPIVDDELTFSIYSNP----NHKALLITDKVRSGTLVRLGTNNYQITSH 180
G+ L ++ + I D+L+FSIYS+ + L++ D V T+VRL Y I S
Sbjct: 149 GLLLNAVSGTDARIRPDQLSFSIYSSEVREDGERGLVVAD-VSPNTVVRLNAGTYHIVSE 207
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YG NA++ ++VE GK+ + TIQ+RAA++TFKLVS+ GGEA+ADTAWSILTA+GD+VG
Sbjct: 208 YGSVNAVIRADIQVEAGKLTEATIQHRAAQVTFKLVSDAGGEAIADTAWSILTAAGDSVG 267
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
ES +A P+MVL+EG Y+ +ARNK++ Y R+F+V+ G++T VEVLM+ ++
Sbjct: 268 ESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQ 316
>gi|116252273|ref|YP_768111.1| hypothetical protein RL2527 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256921|emb|CAK08015.1| conserved hypothetical exported protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 366
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 189/289 (65%), Gaps = 7/289 (2%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSI 64
++ + + + +T + L+ I+ G V + + EA+LT + T ++ G+SW++F I
Sbjct: 29 AFKEFKQLESTPKMPKLDAFIAPGTVPAGVKLRDVPMEAKLTADGTPVEEGLSWYVFSPI 88
Query: 65 SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG 124
+ L GG +F L PGDY ++ SFG GV KK+TV ++ + KQV +L+AG
Sbjct: 89 AGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPAEGEVDKQVMVLDAG 148
Query: 125 GIRLYSIYKPGSPIVDDELTFSIYS----NPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
G+ L ++ + I D+L+FSIYS + + L++ D V T+VRL Y I S
Sbjct: 149 GLLLNAVSGADARIRPDQLSFSIYSSEVRDDGERGLVVAD-VSPNTVVRLNAGTYHIVSE 207
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YG NA++ ++VE GK+ + TIQ+RAA+ITFKLVS+ GGEA+ADTAWSILTA+GD+VG
Sbjct: 208 YGSVNAVIRADIQVEAGKLTEATIQHRAAQITFKLVSDTGGEAIADTAWSILTAAGDSVG 267
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
ES +A P+MVL+EG Y+ +ARNK++ Y R+F+V+ G++T VEVLM+ ++
Sbjct: 268 ESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQ 316
>gi|241204764|ref|YP_002975860.1| hypothetical protein Rleg_2043 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858654|gb|ACS56321.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 366
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 188/289 (65%), Gaps = 7/289 (2%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSI 64
++ + + + +T + L+ I+ G V + + EA+LT + T ++ G+SW++F I
Sbjct: 29 AFKEFKQLESTPKMPKLDAFIAPGTVPDGVKLRDVPMEAKLTADGTPVEEGLSWYVFSPI 88
Query: 65 SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG 124
+ L GG +F L PGDY ++ SFG GV KK+TV + + KQV +L+AG
Sbjct: 89 AGADGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEIDKQVMVLDAG 148
Query: 125 GIRLYSIYKPGSPIVDDELTFSIYS----NPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
G+ L ++ + I D+L+FSIYS + + L++ D + T+VRL Y I S
Sbjct: 149 GLLLNAVSGADARIRPDQLSFSIYSSEVRDDGERGLVMAD-ISPNTVVRLNAGTYHIVSE 207
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YG NA++ ++VE GK+ + TIQ+RAA+ITFKLVS+ GGEA+ADTAWSILTA+GD+VG
Sbjct: 208 YGSVNAVIRADIQVEAGKLTEATIQHRAAQITFKLVSDAGGEAIADTAWSILTAAGDSVG 267
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
ES +A P+MVL+EG Y+ +ARNK++ Y R+F+V+ G++T VEVLM+ ++
Sbjct: 268 ESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQ 316
>gi|222086048|ref|YP_002544580.1| hypothetical protein Arad_2470 [Agrobacterium radiobacter K84]
gi|221723496|gb|ACM26652.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 376
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/272 (45%), Positives = 172/272 (63%), Gaps = 6/272 (2%)
Query: 21 LNNNISKGKGKRVVDAQR-ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIG 79
LN ++ G V R ++ EA+L +S G+SW++F + L G
Sbjct: 45 LNAFVAPGGENSPVRTLRDVSLEAKLAPDSGPQQQGLSWYVFSPFAGADGKLPLVASSKG 104
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIV 139
G SF L PGDY ++ SFG GV KK+TV +QKQ +L+AGG+ L ++ I
Sbjct: 105 GSASFHLLPGDYFVNVSFGRAGVTKKLTVPESGMSQKQTMVLDAGGMVLNAVSGSDVRIP 164
Query: 140 DDELTFSIYS----NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
EL+FSIY+ + L+++D V+ TLV L T Y I S YG NA++ ++VE
Sbjct: 165 PAELSFSIYAGDAKEDGERGLVMSD-VKPNTLVGLSTGTYHIVSEYGAVNAVIRADIQVE 223
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + TIQ+RAAKITFKLVS+ GGEA+ADTAWSILT++GD VGES +A P MVL+EG
Sbjct: 224 AGKVTEATIQHRAAKITFKLVSDAGGEAIADTAWSILTSAGDIVGESLSAFPVMVLAEGQ 283
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
YT +ARNK++ Y R+F+V+ G++T VEVLM++
Sbjct: 284 YTAVARNKDKIYQRDFTVVAGRNTDVEVLMKE 315
>gi|150396276|ref|YP_001326743.1| hypothetical protein Smed_1055 [Sinorhizobium medicae WSM419]
gi|150027791|gb|ABR59908.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 349
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 173/294 (58%), Gaps = 17/294 (5%)
Query: 2 TISFSSYAKAENMHTT------STLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSG 55
T +F S+ H S L+ + I G+ K V EA LT+ + SG
Sbjct: 49 TDAFKSFPSVSGTHKMPKLTGFSPLITDPIQGGELKDV------KLEALLTDQGEPVQSG 102
Query: 56 VSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQ 115
++W +F I L GG +F+L PG+Y ++ +FG G +KI V
Sbjct: 103 LTWRVFSPIPGSDGKLPLLATSEGGSTAFNLVPGEYFVNVAFGRAGATRKIRVPEDGPAD 162
Query: 116 KQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP----NHKALLITDKVRSGTLVRLG 171
KQV +L+AGG+ L ++ I +EL+FSI+S+ + L++ D V+ GTLVRL
Sbjct: 163 KQVLVLDAGGVMLNAVSGSDVRIPPNELSFSIFSSDVKEDGERGLVVAD-VKPGTLVRLN 221
Query: 172 TNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSI 231
Y + S+YG NA++ +++E GK+ + TIQ+RAAK+T KLVSE GGEA+ADTAWSI
Sbjct: 222 AGTYHVVSNYGAVNAVIRADIQIEAGKLTEATIQHRAAKLTLKLVSEAGGEAIADTAWSI 281
Query: 232 LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLM 285
LT+SGD V ES A P++VL+EG YT +ARNK++ Y R+F+V G +T VEVL+
Sbjct: 282 LTSSGDVVSESVGAFPTLVLAEGGYTAVARNKDKIYQRDFAVQAGVNTDVEVLL 335
>gi|15889048|ref|NP_354729.1| hypothetical protein Atu1745 [Agrobacterium tumefaciens str. C58]
gi|15156845|gb|AAK87514.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 326
Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 157/256 (61%), Gaps = 3/256 (1%)
Query: 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA 95
A+ I EA+LT ++ G+SW +F I L GG F L PG+Y ++
Sbjct: 61 ARDIAMEAKLTSEGEAVKEGLSWRVFSPIPGTDGKLPMLASSEGGSAQFHLVPGEYFVNV 120
Query: 96 SFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PN 152
+FG GV KK+ V + QKQV IL+AGG L +I I ++L FS+YS+ P+
Sbjct: 121 AFGRAGVTKKLNVPASGNVQKQVLILDAGGFVLNAIAGSDKQISGNQLKFSVYSSDARPD 180
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ L+ ++ T+VRL Y + S YG NA+V ++VE GK+ + T+Q++AA+IT
Sbjct: 181 GERGLVMADIKPNTIVRLNAGTYHVVSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQIT 240
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLVSE GGEA+ADTAWS+L GD V ES +A +MVL+EG+YT IARNK++ Y R F
Sbjct: 241 LKLVSEQGGEAIADTAWSVLNGGGDVVNESVSAFSTMVLAEGEYTAIARNKDKVYQRNFK 300
Query: 273 VLTGKSTIVEVLMRQK 288
V +G+ + VEVLM+ +
Sbjct: 301 VTSGRDSDVEVLMKDQ 316
>gi|227821827|ref|YP_002825797.1| hypothetical protein NGR_c12630 [Sinorhizobium fredii NGR234]
gi|227340826|gb|ACP25044.1| hypothetical protein NGR_c12630 [Sinorhizobium fredii NGR234]
Length = 333
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/251 (43%), Positives = 159/251 (63%), Gaps = 5/251 (1%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ EA LT + ++SG++W +F I L GG +F+L PG+Y ++ +FG
Sbjct: 68 VKLEALLTADGQPVESGLTWRVFSPIPGGDGKLPLLATSEGGSTAFNLVPGEYFVNVAFG 127
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN----HK 154
+KI V + KQ+ +L+AGG+ L ++ I EL+FSI+S+ +
Sbjct: 128 RAAATRKIRVPEQGALDKQILVLDAGGVMLNAVSGSDVRIPPTELSFSIFSSDEKEDGER 187
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
AL++ D V+ T+VRLG Y + S YG NA++ ++VE GK+ + TIQ+RAAK+T K
Sbjct: 188 ALIVAD-VKPSTVVRLGAGTYHVVSDYGSVNAVIRADIQVEAGKLTEATIQHRAAKLTLK 246
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVSE GGEA+ADTAWSILT+SGD V ES A P++VL+EG YT +ARNK++ Y R+F+V
Sbjct: 247 LVSEAGGEAIADTAWSILTSSGDVVSESVGAFPTLVLAEGSYTAVARNKDKIYQRDFAVK 306
Query: 275 TGKSTIVEVLM 285
G +T VEVL+
Sbjct: 307 AGVNTDVEVLL 317
>gi|325293127|ref|YP_004278991.1| hypothetical protein AGROH133_06703 [Agrobacterium sp. H13-3]
gi|325060980|gb|ADY64671.1| hypothetical protein AGROH133_06703 [Agrobacterium sp. H13-3]
Length = 326
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 156/256 (60%), Gaps = 3/256 (1%)
Query: 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA 95
A+ I EA+LT ++ G+SW +F I L GG F L PG+Y ++
Sbjct: 61 ARDIDMEAKLTSEGEAVKEGLSWRVFSPIPGADGKLPMLASSEGGSAQFHLVPGEYFVNV 120
Query: 96 SFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PN 152
+FG GV KK+ V S QKQV IL+AGG L +I I ++L FS+YS+ P+
Sbjct: 121 AFGRAGVTKKLNVPSSGNVQKQVLILDAGGFVLNAIAGSDKQISANQLKFSVYSSDARPD 180
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ L+ ++ T+VRL Y + S YG NA+V ++VE GK+ + T+Q++AA+IT
Sbjct: 181 GERGLVMADIKPNTVVRLNAGTYHVVSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQIT 240
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLVSE GGEA+ADTAWS+L GD V ES +A +MVL+EG+YT +ARNK++ Y R F
Sbjct: 241 LKLVSEQGGEAIADTAWSVLNGGGDVVNESVSAFSTMVLAEGEYTAMARNKDKVYQRNFK 300
Query: 273 VLTGKSTIVEVLMRQK 288
V +G+ VEVLM+ +
Sbjct: 301 VTSGRDADVEVLMKDQ 316
>gi|222148639|ref|YP_002549596.1| hypothetical protein Avi_2219 [Agrobacterium vitis S4]
gi|221735625|gb|ACM36588.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 328
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 161/265 (60%), Gaps = 5/265 (1%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
I EA+L + G+ W ++ I+ L GG L PGDY ++ SFG
Sbjct: 63 IRFEAKLDNEGQPLQQGLEWRVYSPIAGSDGKLPMVASSQGGSAELQLAPGDYFVNVSFG 122
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKA 155
GV +K+ V + + QKQV +L+AGG+ L ++ P + I +L F IY+ ++
Sbjct: 123 RAGVTRKLDVPTDGEVQKQVMVLDAGGMVLNAVSGPDTRIKPSKLKFKIYAGDGPEDNDR 182
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
LI D + TLV L + Y + S YG+ NA+V +KVE GKI + T+Q+RAA++ FKL
Sbjct: 183 GLIMDNIEPNTLVSLNSGTYHVVSQYGEVNALVRADIKVEAGKITEATLQHRAAQMNFKL 242
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
VSE GGEA+ADTAWSILT+SGD V ES +A P +VLSEG+YT IARNK+R Y +EF V
Sbjct: 243 VSEPGGEAIADTAWSILTSSGDAVAESVSAYPVLVLSEGNYTAIARNKDRIYQKEFQVKA 302
Query: 276 GKSTIVEVLMR--QKRMDKNGQHNT 298
G + VE+L++ Q+ + + ++T
Sbjct: 303 GVNADVELLLKDSQQNVQQQAGYDT 327
>gi|15965179|ref|NP_385532.1| hypothetical protein SMc01011 [Sinorhizobium meliloti 1021]
gi|307309193|ref|ZP_07588864.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307321523|ref|ZP_07600918.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15074359|emb|CAC46005.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306892830|gb|EFN23621.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306900339|gb|EFN30955.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 331
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 171/286 (59%), Gaps = 11/286 (3%)
Query: 4 SFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDS 63
S S K + S L+ + G+ K V EA LT+ + SG++W +F
Sbjct: 39 SISGTHKMPKLTGFSPLITDPTQGGQLKDV------ELEALLTDKGKPVQSGLTWRVFSP 92
Query: 64 ISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA 123
I L GG +F+L PG+Y ++ +FG G +KI V KQV +L+A
Sbjct: 93 IPGSDGKLPLLATSEGGSTAFNLVPGEYFVNVAFGRAGATRKIRVPEDGPLDKQVLVLDA 152
Query: 124 GGIRLYSIYKPGSPIVDDELTFSIYSNP----NHKALLITDKVRSGTLVRLGTNNYQITS 179
GG+ L ++ I +EL+FSI+S+ + L++ D V+ GT+V+L + Y + S
Sbjct: 153 GGVMLNAVSGSDVRIPPNELSFSIFSSDVKEDGERGLVVAD-VKPGTVVQLNADTYHVVS 211
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV 239
+YG NA++ +++E GK+ + TIQ+RAAK+T KLVSE GGEA+ADTAWSILT+SGD V
Sbjct: 212 NYGSVNAVIRADIQIEAGKLTEATIQHRAAKLTLKLVSEAGGEAIADTAWSILTSSGDVV 271
Query: 240 GESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLM 285
ES A P++VL+EG YT +ARNK++ Y R+F+V G +T VEVL+
Sbjct: 272 SESVGAFPTLVLAEGSYTAVARNKDKIYQRDFAVKAGVNTDVEVLL 317
>gi|163760289|ref|ZP_02167372.1| hypothetical protein HPDFL43_08504 [Hoeflea phototrophica DFL-43]
gi|162282688|gb|EDQ32976.1| hypothetical protein HPDFL43_08504 [Hoeflea phototrophica DFL-43]
Length = 249
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 151/249 (60%), Gaps = 3/249 (1%)
Query: 41 CEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHV 100
+A LTE+ +++G++W +F I L GG F+ PGDY I +FG
Sbjct: 1 MQAVLTEDGDPVENGLTWRVFHPIPGADGKLPLLATSEGGSAQFEFEPGDYFIHVAFGRS 60
Query: 101 GVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY---SNPNHKALL 157
GV KK++V + Q +L AGG+ L ++ I +L F+IY + L
Sbjct: 61 GVTKKLSVPAAGPLDTQRLVLEAGGLVLNAVSGVDMRIPVQQLRFNIYKAEEGLDGDQQL 120
Query: 158 ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVS 217
+ + V +VRL Y I S YG NA++ + ++VEPGK+ + IQ+RAA++T KLVS
Sbjct: 121 VVEDVEPNIIVRLNAGTYHIVSEYGGVNAVIRSDIRVEPGKLTEAVIQHRAAQLTLKLVS 180
Query: 218 EMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGK 277
E GGEA+ADTAWSILT+ GD V ES A P++VL+EG+YT IARNK + Y REF+V+ G+
Sbjct: 181 EAGGEAIADTAWSILTSGGDVVSESVGAFPTIVLAEGEYTAIARNKSQTYQREFTVVAGR 240
Query: 278 STIVEVLMR 286
++ +EVL++
Sbjct: 241 NSDIEVLLK 249
>gi|239831911|ref|ZP_04680240.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824178|gb|EEQ95746.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 393
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 160/250 (64%), Gaps = 5/250 (2%)
Query: 37 QRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
+ + +ARL+E+ I +G+ W +F L GG F+L G YL+ +
Sbjct: 134 RELDLKARLSEDGGDIPAGLVWRVFSPDVGADGQLPLIASAQGGGAVFNLPEGSYLVHVA 193
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNH--K 154
+G G K+ITV + +++ V +L+AGG++L +I G I +D L FSIY++ ++ +
Sbjct: 194 YGRAGATKRITVGNATRHE--VMMLDAGGMKLSAILPDGGKINNDLLRFSIYADEDNSDR 251
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
+L++ D V+ T++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++T K
Sbjct: 252 SLIVPD-VKPNTIIRLNSGTYHVVSNYGSANAIIRADIRVEAGKLTEATVQHRAAEVTLK 310
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LV E GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F V
Sbjct: 311 LVRERGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDFKVS 370
Query: 275 TGKSTIVEVL 284
+GK+ VEV+
Sbjct: 371 SGKNEEVEVV 380
>gi|153009483|ref|YP_001370698.1| hypothetical protein Oant_2153 [Ochrobactrum anthropi ATCC 49188]
gi|151561371|gb|ABS14869.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 345
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 158/254 (62%), Gaps = 5/254 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + + +ARL+E I +G+ W +F L GG F+L G YL
Sbjct: 82 LVQTRELDLKARLSEGGGDIPAGLVWRVFSPDVGADGQLPLIASAKGGSAVFNLPEGSYL 141
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+ITV + +++ V +L+AGG++L +I G I DD L FSIY++
Sbjct: 142 VHVAYGRAGATKRITVGNATRHE--VMMLDAGGMKLSAILPDGGKINDDLLRFSIYADED 199
Query: 152 -NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAK 210
N ++L++ D V+ ++RL + Y + S+YG NA + ++VE GK+ + T+Q+RAA+
Sbjct: 200 NNDRSLIVPD-VKPNAIIRLNSGTYHVVSNYGTANATIRADIRVEAGKLTEATVQHRAAE 258
Query: 211 ITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSRE 270
+T KLV E GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+
Sbjct: 259 VTLKLVRERGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRD 318
Query: 271 FSVLTGKSTIVEVL 284
F V +GK+ VEV+
Sbjct: 319 FKVSSGKNEEVEVV 332
>gi|256061155|ref|ZP_05451309.1| hypothetical protein Bneo5_12447 [Brucella neotomae 5K33]
Length = 336
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 156/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 73 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 132
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 133 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 190
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 191 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 250
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 251 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 310
Query: 272 SVLTGKSTIVEVL 284
+V +GK+ VEVL
Sbjct: 311 TVESGKNEDVEVL 323
>gi|261325161|ref|ZP_05964358.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301141|gb|EEY04638.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 321
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 156/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 58 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 117
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 118 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 175
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 176 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 235
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 236 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 295
Query: 272 SVLTGKSTIVEVL 284
+V +GK+ VEVL
Sbjct: 296 TVESGKNEDVEVL 308
>gi|256369495|ref|YP_003107003.1| hypothetical protein BMI_I1075 [Brucella microti CCM 4915]
gi|255999655|gb|ACU48054.1| hypothetical protein BMI_I1075 [Brucella microti CCM 4915]
Length = 330
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 156/257 (60%), Gaps = 3/257 (1%)
Query: 29 KGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFP 88
K +V + +A+LT+ I +G+ W +F L GG SF+L
Sbjct: 63 KNNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPE 122
Query: 89 GDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY 148
G YL+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY
Sbjct: 123 GSYLVHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIY 180
Query: 149 SNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNR 207
++ N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+R
Sbjct: 181 ADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHR 240
Query: 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNY 267
AA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y
Sbjct: 241 AAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIY 300
Query: 268 SREFSVLTGKSTIVEVL 284
R+F V +GK+ VEVL
Sbjct: 301 QRDFKVKSGKNEDVEVL 317
>gi|326409091|gb|ADZ66156.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538796|gb|ADZ87011.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 342
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 79 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 138
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 139 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 196
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 197 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 256
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 257 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 316
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 317 KVESGKNEDVEVL 329
>gi|254719142|ref|ZP_05180953.1| hypothetical protein Bru83_06315 [Brucella sp. 83/13]
gi|306838427|ref|ZP_07471272.1| Hypothetical protein BROD_1242 [Brucella sp. NF 2653]
gi|306406567|gb|EFM62801.1| Hypothetical protein BROD_1242 [Brucella sp. NF 2653]
Length = 336
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 153/247 (61%), Gaps = 3/247 (1%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ +A+LT+ I +G+ W +F L GG SF+L G YL+ ++G
Sbjct: 79 LDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYLVHVAYG 138
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP-NHKALL 157
G K+IT+S+ +++ V IL+AGG++L ++ I DD L FSIY++ N L
Sbjct: 139 RAGATKRITLSNSARHE--VMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL 196
Query: 158 ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVS 217
I V+ ++RL + Y + S+YG NA++ ++VE GK+ + T+Q+RAA++T KLV
Sbjct: 197 IVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVEAGKLTEATVQHRAAEVTLKLVR 256
Query: 218 EMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGK 277
+ GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F V +GK
Sbjct: 257 DHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDFKVESGK 316
Query: 278 STIVEVL 284
+ VEVL
Sbjct: 317 NEDVEVL 323
>gi|161619020|ref|YP_001592907.1| hypothetical protein BCAN_A1085 [Brucella canis ATCC 23365]
gi|260566394|ref|ZP_05836864.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161335831|gb|ABX62136.1| Hypothetical protein BCAN_A1085 [Brucella canis ATCC 23365]
gi|260155912|gb|EEW90992.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 336
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 73 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 132
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 133 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEK 190
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 191 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 250
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 251 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 310
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 311 KVESGKNEDVEVL 323
>gi|254704360|ref|ZP_05166188.1| hypothetical protein Bsuib36_10616 [Brucella suis bv. 3 str. 686]
Length = 336
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 73 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 132
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 133 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEK 190
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 191 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 250
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 251 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 310
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 311 KVESGKNEDVEVL 323
>gi|189024228|ref|YP_001934996.1| hypothetical protein BAbS19_I10130 [Brucella abortus S19]
gi|225852572|ref|YP_002732805.1| hypothetical protein BMEA_A1111 [Brucella melitensis ATCC 23457]
gi|254689294|ref|ZP_05152548.1| hypothetical protein Babob68_03806 [Brucella abortus bv. 6 str.
870]
gi|254693778|ref|ZP_05155606.1| hypothetical protein Babob3T_03799 [Brucella abortus bv. 3 str.
Tulya]
gi|254697430|ref|ZP_05159258.1| hypothetical protein Babob28_06935 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701817|ref|ZP_05163645.1| hypothetical protein Bsuib55_13298 [Brucella suis bv. 5 str. 513]
gi|254706743|ref|ZP_05168571.1| hypothetical protein BpinM_07071 [Brucella pinnipedialis
M163/99/10]
gi|254710150|ref|ZP_05171961.1| hypothetical protein BpinB_07741 [Brucella pinnipedialis B2/94]
gi|254714149|ref|ZP_05175960.1| hypothetical protein BcetM6_12510 [Brucella ceti M644/93/1]
gi|254716793|ref|ZP_05178604.1| hypothetical protein BcetM_10275 [Brucella ceti M13/05/1]
gi|256031645|ref|ZP_05445259.1| hypothetical protein BpinM2_13518 [Brucella pinnipedialis
M292/94/1]
gi|256044730|ref|ZP_05447634.1| hypothetical protein Bmelb1R_09558 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256159789|ref|ZP_05457532.1| hypothetical protein BcetM4_12493 [Brucella ceti M490/95/1]
gi|256255047|ref|ZP_05460583.1| hypothetical protein BcetB_12290 [Brucella ceti B1/94]
gi|256257544|ref|ZP_05463080.1| hypothetical protein Babob9C_09393 [Brucella abortus bv. 9 str.
C68]
gi|256263937|ref|ZP_05466469.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260168775|ref|ZP_05755586.1| hypothetical protein BruF5_10483 [Brucella sp. F5/99]
gi|260545264|ref|ZP_05821005.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260564072|ref|ZP_05834558.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261758256|ref|ZP_06001965.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|297248386|ref|ZP_06932104.1| hypothetical protein BAYG_01339 [Brucella abortus bv. 5 str. B3196]
gi|189019800|gb|ACD72522.1| hypothetical protein BAbS19_I10130 [Brucella abortus S19]
gi|225640937|gb|ACO00851.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|260096671|gb|EEW80546.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260154088|gb|EEW89180.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261738240|gb|EEY26236.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|263094081|gb|EEZ18003.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297175555|gb|EFH34902.1| hypothetical protein BAYG_01339 [Brucella abortus bv. 5 str. B3196]
Length = 336
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 73 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 132
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 133 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 190
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 191 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 250
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 251 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 310
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 311 KVESGKNEDVEVL 323
>gi|148559273|ref|YP_001259001.1| hypothetical protein BOV_1034 [Brucella ovis ATCC 25840]
gi|225627543|ref|ZP_03785580.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237815490|ref|ZP_04594488.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|148370530|gb|ABQ60509.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|225617548|gb|EEH14593.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237790327|gb|EEP64537.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 352
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 89 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 148
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 149 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 206
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 207 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 266
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 267 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 326
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 327 KVESGKNEDVEVL 339
>gi|23501948|ref|NP_698075.1| hypothetical protein BR1070 [Brucella suis 1330]
gi|23347894|gb|AAN29990.1| conserved hypothetical protein [Brucella suis 1330]
Length = 330
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 67 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 126
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 127 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEK 184
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 185 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 244
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 245 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 304
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 305 KVESGKNEDVEVL 317
>gi|294852344|ref|ZP_06793017.1| hypothetical protein BAZG_01266 [Brucella sp. NVSL 07-0026]
gi|294820933|gb|EFG37932.1| hypothetical protein BAZG_01266 [Brucella sp. NVSL 07-0026]
Length = 352
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 153/247 (61%), Gaps = 3/247 (1%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ +A+LT+ I +G+ W +F L GG SF+L G YL+ ++G
Sbjct: 95 LDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYLVHVAYG 154
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP-NHKALL 157
G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++ N L
Sbjct: 155 RAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL 212
Query: 158 ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVS 217
I V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++T KLV
Sbjct: 213 IVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVR 272
Query: 218 EMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGK 277
+ GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F V +GK
Sbjct: 273 DHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDFKVESGK 332
Query: 278 STIVEVL 284
+ VEVL
Sbjct: 333 NEDVEVL 339
>gi|17987199|ref|NP_539833.1| hypothetical protein BMEI0916 [Brucella melitensis bv. 1 str. 16M]
gi|260754806|ref|ZP_05867154.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260761851|ref|ZP_05874194.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883824|ref|ZP_05895438.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214057|ref|ZP_05928338.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261218591|ref|ZP_05932872.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261222238|ref|ZP_05936519.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314207|ref|ZP_05953404.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317704|ref|ZP_05956901.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321912|ref|ZP_05961109.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752374|ref|ZP_05996083.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|265988737|ref|ZP_06101294.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991151|ref|ZP_06103708.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994987|ref|ZP_06107544.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998202|ref|ZP_06110759.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|17982869|gb|AAL52097.1| hypothetical protein BMEI0916 [Brucella melitensis bv. 1 str. 16M]
gi|260672283|gb|EEX59104.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674914|gb|EEX61735.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873352|gb|EEX80421.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915664|gb|EEX82525.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260920822|gb|EEX87475.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923680|gb|EEX90248.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294602|gb|EEX98098.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296927|gb|EEY00424.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303233|gb|EEY06730.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261742127|gb|EEY30053.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262552670|gb|EEZ08660.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262766100|gb|EEZ11889.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001935|gb|EEZ14510.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264660934|gb|EEZ31195.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 321
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 58 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 117
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 118 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 175
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 176 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 235
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 236 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 295
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 296 KVESGKNEDVEVL 308
>gi|62289986|ref|YP_221779.1| hypothetical protein BruAb1_1075 [Brucella abortus bv. 1 str.
9-941]
gi|82699914|ref|YP_414488.1| hypothetical protein BAB1_1092 [Brucella melitensis biovar Abortus
2308]
gi|256113620|ref|ZP_05454440.1| hypothetical protein Bmelb3E_12727 [Brucella melitensis bv. 3 str.
Ether]
gi|62196118|gb|AAX74418.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616015|emb|CAJ11048.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
Length = 330
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 67 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 126
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 127 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 184
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 185 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 244
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 245 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 304
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 305 KVESGKNEDVEVL 317
>gi|261755032|ref|ZP_05998741.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261744785|gb|EEY32711.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 321
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 58 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 117
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 118 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEK 175
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 176 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 235
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 236 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 295
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 296 KVESGKNEDVEVL 308
>gi|306843942|ref|ZP_07476537.1| Hypothetical protein BIBO1_0605 [Brucella sp. BO1]
gi|306275697|gb|EFM57421.1| Hypothetical protein BIBO1_0605 [Brucella sp. BO1]
Length = 336
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 73 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSTSFNLPEGSYL 132
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ V IL+AGG++L ++ I DD L FSIY++
Sbjct: 133 VHVAYGRAGATKRITLSNSARHE--VMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 190
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NA++ ++VE GK+ + T+Q+RAA++
Sbjct: 191 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVEAGKLTEATVQHRAAEV 250
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 251 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 310
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 311 KVESGKNEDVEVL 323
>gi|265984136|ref|ZP_06096871.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264662728|gb|EEZ32989.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 321
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 58 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 117
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ V IL+AGG++L ++ I DD L FSIY++
Sbjct: 118 VHVAYGRAGATKRITLSNSARHE--VMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 175
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NA++ ++VE GK+ + T+Q+RAA++
Sbjct: 176 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVEAGKLTEATVQHRAAEV 235
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 236 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 295
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 296 KVESGKNEDVEVL 308
>gi|306841797|ref|ZP_07474482.1| Hypothetical protein BIBO2_1579 [Brucella sp. BO2]
gi|306288127|gb|EFM59517.1| Hypothetical protein BIBO2_1579 [Brucella sp. BO2]
Length = 352
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 89 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSTSFNLPEGSYL 148
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 149 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEE 206
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NA++ ++VE GK+ + T+Q+RAA++
Sbjct: 207 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVEAGKLTEATVQHRAAEV 266
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 267 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 326
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 327 KVESGKNEDVEVL 339
>gi|260758028|ref|ZP_05870376.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260668346|gb|EEX55286.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
Length = 321
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 161/255 (63%), Gaps = 7/255 (2%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIF--DSISNKKNTLSTTKKIIGGKVSFDLFPGD 90
+V + +A+LT+ I +G+ W +F D + ++ L + K GG SF+L G
Sbjct: 58 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQSPLIASSK--GGSASFNLPEGS 115
Query: 91 YLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN 150
YL+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 116 YLVHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYAD 173
Query: 151 P-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAA 209
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA
Sbjct: 174 EENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAA 233
Query: 210 KITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSR 269
++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R
Sbjct: 234 EVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQR 293
Query: 270 EFSVLTGKSTIVEVL 284
+F V +GK+ VEVL
Sbjct: 294 DFKVESGKNEDVEVL 308
>gi|254730328|ref|ZP_05188906.1| hypothetical protein Babob42_03844 [Brucella abortus bv. 4 str.
292]
Length = 336
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 161/255 (63%), Gaps = 7/255 (2%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIF--DSISNKKNTLSTTKKIIGGKVSFDLFPGD 90
+V + +A+LT+ I +G+ W +F D + ++ L + K GG SF+L G
Sbjct: 73 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQSPLIASSK--GGSASFNLPEGS 130
Query: 91 YLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN 150
YL+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I DD L FSIY++
Sbjct: 131 YLVHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKIKDDLLRFSIYAD 188
Query: 151 P-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAA 209
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA
Sbjct: 189 EENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAA 248
Query: 210 KITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSR 269
++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R
Sbjct: 249 EVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQR 308
Query: 270 EFSVLTGKSTIVEVL 284
+F V +GK+ VEVL
Sbjct: 309 DFKVESGKNEDVEVL 323
>gi|163843336|ref|YP_001627740.1| hypothetical protein BSUIS_A1114 [Brucella suis ATCC 23445]
gi|163674059|gb|ABY38170.1| Hypothetical protein BSUIS_A1114 [Brucella suis ATCC 23445]
Length = 336
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 154/253 (60%), Gaps = 3/253 (1%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
+V + +A+LT+ I +G+ W +F L GG SF+L G YL
Sbjct: 73 LVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIASSKGGSASFNLPEGSYL 132
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP- 151
+ ++G G K+IT+S+ +++ + IL+AGG++L ++ I D L FSIY++
Sbjct: 133 VHVAYGRAGATKRITLSNSARHE--IMILDAGGMKLSAVLPGNGKINDYLLRFSIYADEE 190
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N LI V+ ++RL + Y + S+YG NAI+ ++VE GK+ + T+Q+RAA++
Sbjct: 191 NSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEV 250
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGDY +A+NK+R Y R+F
Sbjct: 251 TLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGDYVAVAKNKDRIYQRDF 310
Query: 272 SVLTGKSTIVEVL 284
V +GK+ VEVL
Sbjct: 311 KVESGKNEDVEVL 323
>gi|13471044|ref|NP_102613.1| hypothetical protein mlr0912 [Mesorhizobium loti MAFF303099]
gi|14021788|dbj|BAB48399.1| mlr0912 [Mesorhizobium loti MAFF303099]
Length = 320
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 155/251 (61%), Gaps = 10/251 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSIS-NKKNTLSTTKKIIGGKVSFDLFPGDYLISASF 97
IT A+LT+ T I G+ W +F + N K L GG F L PG YL+ AS+
Sbjct: 61 ITLSAQLTDKGTDITRGLVWRVFKPVPVNGK--LPMVASAHGGSAVFQLEPGSYLVHASY 118
Query: 98 GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP----NH 153
G G K+ITV + K ++ +L+AGG++L ++ G I +L FSIY
Sbjct: 119 GRAGATKRITVGKEAK--RESLVLDAGGLKLDAVLSGGVRIPPKKLRFSIYEGTAEANGD 176
Query: 154 KALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
+AL+I D V ++VRL Y + S YG NA++ + ++VE GK+ + T+++ AA+IT
Sbjct: 177 RALIIPD-VEPNSVVRLNAGIYHVVSTYGAVNAVIRSDIRVEAGKLTEATVEHHAAEITM 235
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
KLV E GGEA+ADT+WS+L SGD + ES A SMVL+EGDYT+IA+N++R Y ++F+V
Sbjct: 236 KLVREAGGEAIADTSWSLLNESGDPIKESVGAFASMVLAEGDYTIIAKNRDRIYQKDFAV 295
Query: 274 LTGKSTIVEVL 284
+ G++ +EVL
Sbjct: 296 VAGQNQEIEVL 306
>gi|90417789|ref|ZP_01225701.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337461|gb|EAS51112.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 322
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 154/250 (61%), Gaps = 8/250 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSIS--NKKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
+T +ARLTE+ I +G+ W +F +I + + TL + + + +F++ G Y++
Sbjct: 61 LTLKARLTEDGEPIPNGLVWRLFSAIPAIDGRATLIASSE--SSEANFEVPAGSYILHVG 118
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKAL 156
FG GVVK+I + + ++ LNAGG+RL ++ G I L+F +YS+ ++
Sbjct: 119 FGRAGVVKRIDFTGVKT--QETITLNAGGLRLDAMVGDGQTIEPARLSFDVYSDAETESD 176
Query: 157 --LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
LI V ++RL Y I S YG NA V ++VEPGK+ D T+Q+RAA +T K
Sbjct: 177 RDLIASDVPPNKVLRLNAGTYHIVSSYGSVNASVRADIRVEPGKVTDATLQHRAALLTMK 236
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LV E+GGEA+ADTAWS+ TASGD V ES A PSMVL+ GDY ++ARN ++ Y R F+V
Sbjct: 237 LVRELGGEAIADTAWSVTTASGDPVRESVGAFPSMVLASGDYVIVARNNDKVYQRAFAVE 296
Query: 275 TGKSTIVEVL 284
G++T VEVL
Sbjct: 297 PGQNTDVEVL 306
>gi|319783885|ref|YP_004143361.1| hypothetical protein Mesci_4200 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169773|gb|ADV13311.1| hypothetical protein Mesci_4200 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 320
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 174/290 (60%), Gaps = 18/290 (6%)
Query: 7 SYAKAENMHTTSTLLNNNIS-----KGKGKRVVDAQ-RITCEARLTENSTSIDSGVSWHI 60
S+A A+N+ S L IS KG+ + IT A+LT+ + I G+ W +
Sbjct: 23 SFAMAQNVDGVSDLKLPGISSYATPKGETSLALSGGGAITLSAQLTDKGSDITRGIVWRV 82
Query: 61 F--DSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQV 118
F ++++ K ++++ GG F L PG YL+ AS+G G K+ITV K ++
Sbjct: 83 FKPEAVNGKLPMVASSH---GGTAVFQLEPGSYLVHASYGRAGATKRITVGKDAK--RES 137
Query: 119 FILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP----NHKALLITDKVRSGTLVRLGTNN 174
+L+AGG++L ++ G I +L FSIY +AL+I D V ++VRL
Sbjct: 138 LVLDAGGLKLDAVLSGGVRIPPKKLRFSIYEGTAEANGDRALIIPD-VEPNSVVRLNAGI 196
Query: 175 YQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTA 234
Y + S YG NA++ + ++VE GK+ + T+++ AA+IT KLV E GGEA+ADT+WS+L
Sbjct: 197 YHVVSTYGAVNAVIRSDIRVEAGKLTEATVEHHAAEITMKLVRETGGEAIADTSWSLLNE 256
Query: 235 SGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVL 284
SGD + E+ A SMVL+EGDYT+IA+N++R Y ++F+V+ G++ +EVL
Sbjct: 257 SGDPIKETVGAFASMVLAEGDYTIIAKNRDRIYQKDFTVVAGQNQEIEVL 306
>gi|110633364|ref|YP_673572.1| hypothetical protein Meso_1010 [Mesorhizobium sp. BNC1]
gi|110284348|gb|ABG62407.1| hypothetical protein Meso_1010 [Chelativorans sp. BNC1]
Length = 316
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 158/253 (62%), Gaps = 8/253 (3%)
Query: 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA 95
A ++ A+LT+++ I G++W +F L GG +F L PG YL+ A
Sbjct: 55 ASQVVLAAQLTKDAPEIPGGLTWRVFSPEPGPDGKLPLVATAKGGTSAFSLAPGSYLVHA 114
Query: 96 SFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY-SNPN-- 152
++G G K+ITV+ + K++ +L+AGG++L ++ I + +L FSIY + P+
Sbjct: 115 AYGRAGATKRITVAGEAKHES--LVLDAGGLKLDAVLPGDIRIPEKQLRFSIYEAEPDAT 172
Query: 153 -HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
+ L++ D VR +VRL Y + S+YG A++ + ++VE G++ + T+++RAA++
Sbjct: 173 GERPLIVPD-VRPNAIVRLNAGTYHVVSNYGPI-AVIRSDIRVEAGQLTEATVEHRAAEM 230
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV E GGEA+ADTAWSILT +G+ V ++ A S+VL EGDYT++A+N+ER Y R+F
Sbjct: 231 TLKLVRETGGEAIADTAWSILTETGEIVLDTVGAYASIVLPEGDYTIVAKNRERIYQRDF 290
Query: 272 SVLTGKSTIVEVL 284
+V G+ VE+L
Sbjct: 291 TVTPGQKQDVELL 303
>gi|260463882|ref|ZP_05812078.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259030257|gb|EEW31537.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 320
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 158/252 (62%), Gaps = 12/252 (4%)
Query: 39 ITCEARLTENSTSIDSGVSWHIF--DSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
IT A+LT+ I G+ W +F ++++ K +++ GG F L PG YL+ AS
Sbjct: 61 ITLSAQLTDKGADITRGLVWRVFKPEAVNGKLPMVASAH---GGNAVFQLEPGSYLVHAS 117
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP----N 152
+G G K+ITV + K ++ +L+AGG++L ++ G I +L FSIY
Sbjct: 118 YGRAGATKRITVGKEAK--RESLVLDAGGLKLDAVLSGGVRIPPKKLRFSIYEGTAEANG 175
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+AL+I D V ++VRL Y + S YG NA++ + ++VE GK+ + T+++ AA+IT
Sbjct: 176 DRALIIPD-VEPNSVVRLNAGIYHVVSTYGAVNAVIRSDIRVEAGKLTEATVEHHAAEIT 234
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV E GGEA+ADT+WS+L SGD + E+ A SMVL+EGDYT+IA+N++R Y ++F+
Sbjct: 235 MKLVRESGGEAIADTSWSLLNESGDPIKETVGAFASMVLAEGDYTIIAKNRDRIYQKDFT 294
Query: 273 VLTGKSTIVEVL 284
V+ G++ +EVL
Sbjct: 295 VVGGQNQEIEVL 306
>gi|319408656|emb|CBI82311.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 334
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 154/257 (59%), Gaps = 4/257 (1%)
Query: 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF 97
++T ARLT NS +I G+ W ++ I N L GG F+L G YL+ SF
Sbjct: 74 KLTLNARLTRNSENITKGLVWRVYTPILGIDNKLPLIATFEGGTAHFNLEEGSYLVHVSF 133
Query: 98 GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY--SNPNHKA 155
GH +V +I + + ++ K F LNAGGI S G+ + + EL F+IY + N
Sbjct: 134 GHASMVDQINLKNGQEFVKN-FNLNAGGIVFNSTLLNGT-VNEKELYFTIYKDAEENDDT 191
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+I V+ ++VRL T +Y + SHYG NAI + ++V+ GKII+VT Q++AA+I KL
Sbjct: 192 GVILSNVKPQSIVRLKTGHYHVVSHYGSVNAITRSDIQVDAGKIIEVTFQHQAAQIVLKL 251
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
V + GGEA+ADT+WSI SGD V E+ A S+VL+EGDY IA+NK++ Y + FSV++
Sbjct: 252 VRQEGGEALADTSWSITNESGDIVYEAVGAYVSLVLAEGDYIAIAKNKDQIYQKVFSVVS 311
Query: 276 GKSTIVEVLMRQKRMDK 292
G+ V V+ + + K
Sbjct: 312 GRDEDVNVIADTQNIQK 328
>gi|319407168|emb|CBI80807.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 300
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 157/257 (61%), Gaps = 4/257 (1%)
Query: 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF 97
++ A+LT S +I SG+ W ++ I N L GG FDL PG YL+ SF
Sbjct: 40 QLVLNAQLTNKSENIMSGLVWRVYAPILGSDNKLPLVATYEGGSARFDLKPGSYLVHVSF 99
Query: 98 GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKA 155
GH VV+++++ +++ K F L+AGGI L SI G+ I + EL F+IY + N
Sbjct: 100 GHASVVQRVSLENRQHLVKN-FNLDAGGIILNSILFNGT-INEKELRFTIYEDERENDDT 157
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+I V+ ++VRL +Y++ SHYG NAI+ + ++VE GKI +VT++++AA+I KL
Sbjct: 158 GVILANVKPQSMVRLKAGHYRVVSHYGSVNAIIRSDIQVEAGKITEVTLEHQAAQIILKL 217
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
V + GGEA+ADT+WSI SGD + E+ A +VL EGDY IA+NK++ Y + FSV++
Sbjct: 218 VRQEGGEALADTSWSITNDSGDIIYETVGAYVLLVLVEGDYIAIAKNKDKIYRKVFSVVS 277
Query: 276 GKSTIVEVLMRQKRMDK 292
G+ V V+ + + +
Sbjct: 278 GQDKDVNVIANSQNIQQ 294
>gi|319404150|emb|CBI77743.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 300
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 154/249 (61%), Gaps = 4/249 (1%)
Query: 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF 97
++ A+LT S +I SG+ W ++ I N L GG FDL PG YL+ SF
Sbjct: 40 QLILHAQLTNKSENIMSGLVWRVYAPILGSDNKLPLVATYEGGSARFDLKPGSYLVHVSF 99
Query: 98 GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKA 155
GH VV+++++ ++++ K F L+AGGI L S G I + EL F+IY + N
Sbjct: 100 GHASVVQRVSLENRQQLVKN-FNLDAGGIILNSTLFNG-IINEKELRFTIYEDERENDDT 157
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+I V+ ++VRL +Y++ SHYG NAI+ + ++VE GKI +VT++++AA+I KL
Sbjct: 158 GVILANVKPQSMVRLKAGHYRVVSHYGSVNAIIRSDIQVEAGKITEVTLEHQAAQIILKL 217
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
V + GGEA+ADT+WSI SGD + E+ A +VL EGDY IA+NK++ Y + FSV++
Sbjct: 218 VRQEGGEALADTSWSITNDSGDIIYETVGAYVLLVLVEGDYIAIAKNKDKIYRKVFSVVS 277
Query: 276 GKSTIVEVL 284
G+ V+++
Sbjct: 278 GQDKDVDII 286
>gi|114706615|ref|ZP_01439516.1| hypothetical protein FP2506_12724 [Fulvimarina pelagi HTCC2506]
gi|114538007|gb|EAU41130.1| hypothetical protein FP2506_12724 [Fulvimarina pelagi HTCC2506]
Length = 390
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 148/252 (58%), Gaps = 9/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISN--KKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
+ EARL+E + G+ W +F ++ ++TL T K K SF++ PG Y++ A+
Sbjct: 133 LVLEARLSEEGEIVPGGIVWRLFSAVPQLQGRSTLIATSK--EAKPSFNVPPGAYIVHAT 190
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRL-YSIYKPGSPIVDDELTFSIYSNPNHKA 155
FG G+VK+I + N K+V +L AGG++L ++ G + L F I+++ +
Sbjct: 191 FGRAGIVKRIDFNGV--NVKEVVVLGAGGLKLDATVSSEGQAATESRLKFDIFADAERDS 248
Query: 156 L--LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
LI V G +VRL Y + S YG NA ++VE GK+ + T+Q+RAA+ T
Sbjct: 249 ERELIASGVAPGEVVRLNAGLYHVVSTYGSINARTQADIRVEAGKLTEATLQHRAAQQTL 308
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
KLV E GGEA+A TAW++ + SGD + +SA A SMVL+EGDY +ARN+E Y R FSV
Sbjct: 309 KLVREHGGEAIAGTAWTVTSMSGDILRKSAGAFASMVLAEGDYMAVARNRETTYQRSFSV 368
Query: 274 LTGKSTIVEVLM 285
G+ VE+L+
Sbjct: 369 KAGEDADVEILL 380
>gi|328543266|ref|YP_004303375.1| hypothetical protein SL003B_1647 [Polymorphum gilvum SL003B-26A1]
gi|326413012|gb|ADZ70075.1| hypothetical protein SL003B_1647 [Polymorphum gilvum SL003B-26A1]
Length = 341
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 137/245 (55%), Gaps = 5/245 (2%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
ARL++ ++ GV W I+ N L +GG F L PG YLI ++GH G
Sbjct: 92 ARLSDGGPTLSDGVIWRIYSETPNSNGNLELVATSMGGDAEFRLDPGAYLIHTAYGHAGA 151
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLIT 159
++ V + +LNAGG+RL + + + F I+ N + LIT
Sbjct: 152 TNRLVVG--RGVYSKTVVLNAGGVRLDAALGDNRHLGAEVARFDIFGMDYNEQGERQLIT 209
Query: 160 DKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEM 219
V T+VRL Y + S YG NA+V ++VEPGK+ T+ ++AA IT KLV+E
Sbjct: 210 TNVGPETIVRLNAGTYHVVSRYGDVNAVVRADIRVEPGKLTGATVYHQAADITLKLVNEP 269
Query: 220 GGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKST 279
GGEA+A+T+WS+LT GD V E++ A P VL+ G+Y VIARN NYSR F+V++G+
Sbjct: 270 GGEAIANTSWSVLTPGGDIVVEASGAFPDFVLAAGEYEVIARNNGVNYSRSFTVVSGEDR 329
Query: 280 IVEVL 284
VEVL
Sbjct: 330 EVEVL 334
>gi|49474353|ref|YP_032395.1| hypothetical protein BQ07670 [Bartonella quintana str. Toulouse]
gi|49239857|emb|CAF26251.1| hypothetical protein BQ07670 [Bartonella quintana str. Toulouse]
Length = 336
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 166/294 (56%), Gaps = 9/294 (3%)
Query: 4 SFSSYAKAENMHTTSTLLNNNISKGKGKR---VVDAQRITCEARLTENSTSIDSGVSWHI 60
+FS + + + + N ISK + + +V ++ ARLT +S ++ G+ W +
Sbjct: 41 AFSEEVREQELQKEQS--TNFISKSQDREKENLVSQSQLILHARLTNSSENVVKGLIWRV 98
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
+ I N L GG F+L PG YL+ SFGH V I++ + + K F
Sbjct: 99 YAPILGIDNKLPLIASYEGGSAHFNLEPGSYLVHVSFGHASAVHHISLQNGQSLVKN-FN 157
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLGTNNYQIT 178
L+AGG+ L + G+ I + EL F+IY + N +I V+ ++VRL Y +
Sbjct: 158 LDAGGVLLNATLLNGT-INEKELRFTIYEDEKENDDTGVILSNVKPLSIVRLKAGRYHVA 216
Query: 179 SHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT 238
SHYG N IV + ++V+ GKI +VT++++AA+I FKLV + GGEA+ADT+WSI SGD
Sbjct: 217 SHYGSINVIVHSDIQVDAGKITEVTLEHQAAQIVFKLVRQEGGEALADTSWSITNDSGDI 276
Query: 239 VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
+ E+ A S+VL+EG Y IA+NK++ Y + FSV++G + ++ + + M +
Sbjct: 277 IYETVGAYVSLVLAEGKYIAIAKNKDQIYQKAFSVVSGHDEDISLVAKVQNMQQ 330
>gi|163868517|ref|YP_001609726.1| hypothetical protein Btr_1369 [Bartonella tribocorum CIP 105476]
gi|161018173|emb|CAK01731.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 327
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 148/257 (57%), Gaps = 4/257 (1%)
Query: 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF 97
++ ARLT + I+ G+ W ++ I N L GG FDL PG YL+ SF
Sbjct: 67 QLILNARLTNSRQDIEKGLVWRVYAPILGIDNKLPLVATYKGGSARFDLEPGSYLVHVSF 126
Query: 98 GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKA 155
GH+ V+ + + + + K F AGG+ L + GS I + EL F+IY + N
Sbjct: 127 GHMSAVRHVRLENGQSLVK-TFHFEAGGLILNATLSNGS-INEKELRFTIYEDEKENDDT 184
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+I V+ ++VRL Y + SHYG NA + ++VE GK+ +VT++++AA+I KL
Sbjct: 185 GVILSNVKPQSVVRLKAGRYHVASHYGSINATARSDIQVEAGKMTEVTLEHQAAQIVLKL 244
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
V + GGEA+ADT+WS+ SGD V E+ A S+VL+EG+Y IA+NK++ Y + FSV++
Sbjct: 245 VRQEGGEALADTSWSLANDSGDIVYETVGAYVSLVLAEGEYIAIAKNKDKIYQKVFSVVS 304
Query: 276 GKSTIVEVLMRQKRMDK 292
G + V+ ++ M +
Sbjct: 305 GHDEDISVVANEQNMQR 321
>gi|307946208|ref|ZP_07661543.1| FHA domain-containing protein [Roseibium sp. TrichSKD4]
gi|307769872|gb|EFO29098.1| FHA domain-containing protein [Roseibium sp. TrichSKD4]
Length = 363
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 141/245 (57%), Gaps = 6/245 (2%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
A+LT ++ + SG++W I+ +N L K GG F L PG YLI +G+
Sbjct: 108 AKLTRDTAPLTSGLTWRIYSETTNSDGRLELIAKSEGGHAEFQLDPGVYLIHTGYGYASA 167
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLIT 159
V +I + K + ++ LNAGG++L + +P+ D + F +Y N + LI
Sbjct: 168 VNRIVMG--RKVESKMVTLNAGGVKLNAGLDQDTPLSTD-VQFDVYGMEFNERGERQLIV 224
Query: 160 DKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEM 219
D + G +VRL Y I + YG N++V V+V PGK+ + T+ ++AA+IT KLV+E
Sbjct: 225 DGLSPGDIVRLNAETYHIVNRYGDSNSVVRADVQVLPGKLTEATLFHKAAEITLKLVNEE 284
Query: 220 GGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKST 279
GGEA+A+T+WS+L+ GD V E+ A PS VL+ GDY VIARN R + +F V TG
Sbjct: 285 GGEAIANTSWSVLSPGGDVVVEATGAFPSFVLAAGDYEVIARNNGRLFQDKFKVQTGGDR 344
Query: 280 IVEVL 284
VEVL
Sbjct: 345 EVEVL 349
>gi|118591253|ref|ZP_01548652.1| hypothetical protein SIAM614_16542 [Stappia aggregata IAM 12614]
gi|118436329|gb|EAV42971.1| hypothetical protein SIAM614_16542 [Stappia aggregata IAM 12614]
Length = 342
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 136/245 (55%), Gaps = 5/245 (2%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
A+LT +S ++ G+ W I+ +N L GG F L PG YLI ++G+
Sbjct: 84 AKLTPDSPPLNEGLIWRIYSETTNADGRLQLVATSQGGDAEFRLDPGTYLIHTAYGYAQA 143
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLIT 159
+I + KE K V LNAGGI+ + K G + + F +Y N + LI
Sbjct: 144 TNRIVIG-KEVQSKMV-TLNAGGIKFGAALKDGEDLDGRAVAFDLYGMEFNQRGERNLIA 201
Query: 160 DKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEM 219
V+ G+++RLG N Y + S YG NA+V ++V PGK+ + TI ++AA IT KLV+E
Sbjct: 202 SNVKPGSILRLGANTYHVVSKYGDVNAVVRADIQVLPGKLTEATIFHKAAGITLKLVNER 261
Query: 220 GGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKST 279
GGEA+A+T WS+L+ GD V E+ A P VL+EG+Y +ARN R Y F V G+
Sbjct: 262 GGEAIANTTWSVLSPGGDVVVEATGAFPDFVLAEGEYEALARNNGRTYLHTFQVQPGEDR 321
Query: 280 IVEVL 284
VEV+
Sbjct: 322 EVEVV 326
>gi|49475740|ref|YP_033781.1| hypothetical protein BH09950 [Bartonella henselae str. Houston-1]
gi|49238547|emb|CAF27787.1| hypothetical protein BH09950 [Bartonella henselae str. Houston-1]
Length = 339
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 158/265 (59%), Gaps = 6/265 (2%)
Query: 31 KRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGD 90
+ ++ ++ ARLT ++ +I G+ W ++ I N L GG FDL PG
Sbjct: 72 ENLISQTQLILHARLTNSNENIVKGLVWRVYAPILGVDNKLPLITTYEGGSARFDLEPGS 131
Query: 91 YLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDD-ELTFSIYS 149
YL+ SFGH V+ I++ + K+ Q F L+AG + L + G IV++ EL F++Y
Sbjct: 132 YLVHVSFGHASAVRHISLENG-KSLVQNFNLDAGAVTLNATLLNG--IVNEKELRFTLYE 188
Query: 150 NP--NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNR 207
+ N ++ ++ ++VRL Y + SHYG NA+V + ++V+ GKI +V+++++
Sbjct: 189 DEKENDDTGVVLSNIKPHSIVRLKAGRYHVASHYGSINAVVHSDIQVDAGKITEVSLEHQ 248
Query: 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNY 267
AA+I KLV + GGEA+ADT+WSI SGD + E+ A S+VL+EG+Y IA+NK++ Y
Sbjct: 249 AAQIVLKLVRQEGGEALADTSWSITNNSGDIMYETVGAYVSLVLAEGEYIAIAKNKDQIY 308
Query: 268 SREFSVLTGKSTIVEVLMRQKRMDK 292
+ FSV++G+ + V+ + + M +
Sbjct: 309 QKVFSVVSGRDEDINVVAKAQNMQQ 333
>gi|255605664|ref|XP_002538430.1| conserved hypothetical protein [Ricinus communis]
gi|223512190|gb|EEF23954.1| conserved hypothetical protein [Ricinus communis]
Length = 241
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 128 LYSIYKPGSPIVDDELTFSIYSNP---NHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
L + P I +EL+FSIYS+ + + L+ D V+ TLV L Y + S YG+
Sbjct: 23 LECVSGPDVCIPPNELSFSIYSSETKEDGERGLVMDDVKPNTLVGLSAGTYHVVSEYGEV 82
Query: 185 NAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESAN 244
NA++ ++VE GK+ + TIQ+RAAK+TFKLVS+ GGEA+ADTAWSILTA+GD VGES +
Sbjct: 83 NAVIRADIQVEAGKVTEATIQHRAAKLTFKLVSDAGGEAIADTAWSILTAAGDIVGESVS 142
Query: 245 ASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
A P+MVL+EG YT +ARNK++ Y R+F+V G +T VEVLM+Q++
Sbjct: 143 AFPTMVLAEGRYTAVARNKDKIYQRDFTVAAGMNTDVEVLMKQQQ 187
>gi|240850749|ref|YP_002972149.1| hypothetical protein Bgr_12180 [Bartonella grahamii as4aup]
gi|240267872|gb|ACS51460.1| hypothetical protein Bgr_12180 [Bartonella grahamii as4aup]
Length = 329
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 148/257 (57%), Gaps = 4/257 (1%)
Query: 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF 97
++ ARLT + I+ G+ W ++ I N L GG FDL PG YL+ SF
Sbjct: 69 QLILNARLTNSHPDIEKGLVWRVYAPILGIDNKLPLVATYKGGSARFDLEPGSYLVHVSF 128
Query: 98 GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKA 155
GH+ V+ I + + + K F L AGG+ L + G + + EL F+IY + N
Sbjct: 129 GHMSAVRHIRLKNGQSLVKN-FNLEAGGVILNATLLNG-VMNEKELRFTIYEDEKENDDT 186
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+I V+ ++VRL Y + SHYG NA + ++V+ GK+ +VT++++AA+I KL
Sbjct: 187 GVILSNVKPQSVVRLKAGRYHVASHYGSINATARSDIQVDAGKMTEVTLEHQAAQIVLKL 246
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
V + GGEA+ADT+WS+ SGD V E+ A S+VL+EG+Y IA+NK++ Y + FSV++
Sbjct: 247 VRQEGGEALADTSWSLANDSGDIVYETVGAYVSLVLAEGEYIAIAKNKDKIYQKVFSVVS 306
Query: 276 GKSTIVEVLMRQKRMDK 292
G + V+ ++ M +
Sbjct: 307 GHDEDISVVANEQNMQR 323
>gi|319405603|emb|CBI79226.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 246
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 144/241 (59%), Gaps = 4/241 (1%)
Query: 54 SGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEK 113
SG+ W ++ I N L GG FDL PG YL+ SFGH V++IT+ + ++
Sbjct: 2 SGLVWRVYVPILGSDNKLPLIAIYKGGTARFDLKPGSYLVHVSFGHASAVQRITLENGQQ 61
Query: 114 NQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLG 171
K F L+AGGI S G+ I + EL F+IY + N +I V+ ++VRL
Sbjct: 62 LVKN-FNLDAGGIIFNSTLFNGT-INEKELRFTIYEDEKENDDTGVILANVKPQSIVRLK 119
Query: 172 TNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSI 231
+ +Y++ SHYG NAIV ++VE GKI +VT++++AA+I KLV + GGEA+ADT+WSI
Sbjct: 120 SGHYRVVSHYGSVNAIVRADIQVEAGKITEVTLEHQAAQIILKLVRQEGGEALADTSWSI 179
Query: 232 LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMD 291
SGD + E+ A +VL EGDY IA+NK++ Y + FSV++G V V+ + +
Sbjct: 180 TNDSGDIIYETVGAYVLLVLVEGDYIAIAKNKDKIYQKIFSVVSGHDKDVNVIANSQNIQ 239
Query: 292 K 292
+
Sbjct: 240 Q 240
>gi|312114133|ref|YP_004011729.1| hypothetical protein Rvan_1371 [Rhodomicrobium vannielii ATCC
17100]
gi|311219262|gb|ADP70630.1| hypothetical protein Rvan_1371 [Rhodomicrobium vannielii ATCC
17100]
Length = 331
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 145/252 (57%), Gaps = 6/252 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+T A L+E S + + V W +F + + T KI + + +L PG YL++ ++G
Sbjct: 82 VTLTAYLSEGSAPMVADVVWRVFQQRNARDGTYKIVTKIHEARPTIELKPGRYLVNVAYG 141
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN----HK 154
+ +KI V + + + F++NAGG+RL + G + + L IYS+ ++
Sbjct: 142 RANLTRKIDVWPQTPSNED-FVVNAGGLRLMATLAHGPIVAEHLLKLEIYSDAQDQTGNR 200
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
L D +R G ++RL + Y I S YG N++VST + +EPGKI + + + A K+T K
Sbjct: 201 QRLFGD-LRPGIVIRLNSGIYHIVSTYGDANSVVSTDIVIEPGKIAEANVDHDAGKVTLK 259
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LV GGEAVA T W+I A G+ + ESA A P+ VL+ G+Y V A++ ER ++ F++
Sbjct: 260 LVQRRGGEAVAGTRWTIYNAGGEVIRESAGAFPTHVLAAGEYRVAAQHGERQFAGAFTIA 319
Query: 275 TGKSTIVEVLMR 286
G +T+VEVLM+
Sbjct: 320 AGDTTLVEVLMQ 331
>gi|254504001|ref|ZP_05116152.1| hypothetical protein SADFL11_4040 [Labrenzia alexandrii DFL-11]
gi|222440072|gb|EEE46751.1| hypothetical protein SADFL11_4040 [Labrenzia alexandrii DFL-11]
Length = 358
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 138/254 (54%), Gaps = 5/254 (1%)
Query: 34 VDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLI 93
+D + A+LT +S ++ + W I+ +N L GG F L PG Y+I
Sbjct: 93 LDGGALYLMAKLTRDSQPLNDNLIWRIYSETTNADGRLQLIATSKGGDAEFRLDPGAYMI 152
Query: 94 SASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS---N 150
S+G+ +I + KE K V LNAGGI+ + G+P+ +TF IYS +
Sbjct: 153 HTSYGYAQATNRIVIG-KEVLSKMV-TLNAGGIKFDATLPDGAPLESGPVTFDIYSREFD 210
Query: 151 PNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAK 210
+ LI V+ G+++RL + Y I S YG NA + ++V PGK+ + TI ++AA
Sbjct: 211 QRGERDLIASSVKPGSIIRLNADTYHIVSRYGDANAEIRADIQVLPGKLTEATIFHKAAD 270
Query: 211 ITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSRE 270
IT KLV+E GGEA+A+T WS+L+ GD V E+ A P VL+ G+Y +ARN R Y
Sbjct: 271 ITLKLVNERGGEAIANTTWSVLSPGGDVVVEATGAFPDFVLAAGEYEAVARNNGRTYLHT 330
Query: 271 FSVLTGKSTIVEVL 284
F+V G VEV+
Sbjct: 331 FTVEPGADREVEVV 344
>gi|319898840|ref|YP_004158933.1| hypothetical protein BARCL_0674 [Bartonella clarridgeiae 73]
gi|319402804|emb|CBI76355.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 246
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 143/241 (59%), Gaps = 4/241 (1%)
Query: 54 SGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEK 113
SG+ W ++ I +N L GG FDL PG YLI SFGH V+ +++ + +
Sbjct: 2 SGLVWRVYAPILGNENKLLLVAIYEGGTARFDLKPGSYLIHVSFGHASSVEHVSLENGQH 61
Query: 114 NQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLG 171
K F L+AGG+ S G+ I + EL F+IY + N +I V++ ++VRL
Sbjct: 62 LIKN-FNLDAGGVVFNSTLFNGT-INEKELRFTIYEDEKENDDTGVILANVKAQSVVRLK 119
Query: 172 TNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSI 231
+Y + SHYG NAI+ + ++VE GKI +VT++++AA+I KLV + GGEA+ADT+WSI
Sbjct: 120 AGHYHVVSHYGSVNAIIRSDIQVEAGKITEVTLEHQAAQIILKLVRQEGGEALADTSWSI 179
Query: 232 LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMD 291
SGD + E+ + +VL EGDY IA+NK++ Y + FSV++G V V+ K +
Sbjct: 180 TNDSGDIIYETVGSYVLLVLVEGDYIAIAKNKDKIYQKVFSVISGHDKDVNVIANSKNIQ 239
Query: 292 K 292
+
Sbjct: 240 Q 240
>gi|218677880|ref|ZP_03525777.1| hypothetical protein RetlC8_03042 [Rhizobium etli CIAT 894]
Length = 254
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 126/211 (59%), Gaps = 5/211 (2%)
Query: 21 LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGG 80
LN I+ G + + EA+LT +S ++ G+SW++F I+ L GG
Sbjct: 45 LNAFIAPGTAPEGAKLRDVAMEAKLTADSAPVEDGLSWYVFSPIAGTDGKLPLIASAKGG 104
Query: 81 KVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVD 140
+F L PGDY ++ SFG GV KK+TV + + KQV +L+AGG+ L ++ + I
Sbjct: 105 PAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVGKQVMVLDAGGLLLNAVSGTDARIRP 164
Query: 141 DELTFSIYSNP----NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEP 196
D+L+FSIYS+ + L++ D V T+VRL Y I S YG NA++ ++VE
Sbjct: 165 DQLSFSIYSSEVREDGERGLVMAD-VSPNTVVRLNAGTYHIVSEYGSVNAVIRADIQVEA 223
Query: 197 GKIIDVTIQNRAAKITFKLVSEMGGEAVADT 227
GK+ + TIQ+RAA++TFKLVS+ GGEA+ADT
Sbjct: 224 GKLTEATIQHRAAQVTFKLVSDAGGEAIADT 254
>gi|121602335|ref|YP_989049.1| hypothetical protein BARBAKC583_0752 [Bartonella bacilliformis
KC583]
gi|120614512|gb|ABM45113.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 320
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 167/298 (56%), Gaps = 16/298 (5%)
Query: 4 SFSSYAKAENM-HTTSTLLNNNI--SKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
S+S+++K E + + L ++I S+ + + + ARL NS +I G+ W I
Sbjct: 24 SYSAFSKEERVKNLQQERLTDSIIHSQNNEEETLSQATLIVHARLMNNSENITKGLVWRI 83
Query: 61 FDSI--SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQV 118
+ + +K ++T + GG FDL G YL+ SFGH V ++++ EK Q+ V
Sbjct: 84 YAPVLMGDKLPLIATFE---GGSAHFDLEAGSYLVHVSFGHASAVHRVSL---EKGQQLV 137
Query: 119 --FILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNH--KALLITDKVRSGTLVRLGTNN 174
F L AGG+ L S G I + EL F+IY + +I V+ +LVRL
Sbjct: 138 KNFNLEAGGVILNSTVLNG-IINEKELNFTIYEDAKETDDTGVILSNVKPQSLVRLKAGY 196
Query: 175 YQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTA 234
Y + S+YG NAI+S ++V+ GKI +V+++++AA+I KLV + GGEA+ADT+WSI
Sbjct: 197 YHVVSYYGSINAIISADIQVDEGKITEVSLEHQAAQILLKLVRQEGGEALADTSWSITND 256
Query: 235 SGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
SGD + E+ A +VL EGDY IA+NK++ Y + FSV++G V V+ M K
Sbjct: 257 SGDIIYETVGAYVPLVLVEGDYIAIAKNKDQIYQKVFSVISGYDKDVSVIADTDIMQK 314
>gi|27380660|ref|NP_772189.1| hypothetical protein bll5549 [Bradyrhizobium japonicum USDA 110]
gi|27353825|dbj|BAC50814.1| bll5549 [Bradyrhizobium japonicum USDA 110]
Length = 357
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 152/253 (60%), Gaps = 10/253 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
++ A+ ++S I SG+ W +F ++ T ++ + L PG+Y++ +FG
Sbjct: 110 LSLTAKYGKDSAPITSGLVWRVFADRPDENGTFKLIREDRNATPNIVLPPGNYVVHVAFG 169
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPG-SPIVDDELTFSIYSNPN----H 153
V V+ TVS K + ++ F+L AGG+R+ + G S I ++++F+IY
Sbjct: 170 LVSAVR--TVSLKAETDRESFVLPAGGLRIEG--RVGTSRIPQNQISFAIYKGSQFESGE 225
Query: 154 KALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
+A L+ + V +G +V L Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT
Sbjct: 226 RASLVPN-VAAGDVVLLPEGTYYIISNYGDANSVVRSDIRVQAGKLTDVTITHRAAVITL 284
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
KLVS+ GGEA+A+TAWS+LT GD + ES A P +VLSEG+Y IA+N+ + Y R F+V
Sbjct: 285 KLVSDRGGEALANTAWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVYERGFNV 344
Query: 274 LTGKSTIVEVLMR 286
+ G VEV+ R
Sbjct: 345 VNGVDGEVEVVAR 357
>gi|192292259|ref|YP_001992864.1| hypothetical protein Rpal_3891 [Rhodopseudomonas palustris TIE-1]
gi|192286008|gb|ACF02389.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 353
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 148/252 (58%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I+SG+ W ++ ++ + ++ G + L PG+Y++ + G
Sbjct: 106 LALAARYGKDQPVINSGLVWRVYSDKPDESGAIKLVREDHGATPNIPLPPGNYVVHVALG 165
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSP-IVDDELTFSIYSNP---NHK 154
V V+ +TV K +++ F+L AGG+R+ K GS I ++++F+IY N +
Sbjct: 166 LVSAVRPVTV--KSDAERENFVLPAGGLRIEG--KVGSSRIPSNQISFTIYKGSQFDNAQ 221
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
+ V +G + + Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT K
Sbjct: 222 RAPLLPSVAAGDVALVPEGTYYIVSNYGDANSVVRSDIRVQAGKLTDVTITHRAAVITLK 281
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVSE GGEA+A+T+WS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+V+
Sbjct: 282 LVSEKGGEALANTSWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERGFNVV 341
Query: 275 TGKSTIVEVLMR 286
G VEVL R
Sbjct: 342 NGVDGEVEVLAR 353
>gi|316933332|ref|YP_004108314.1| hypothetical protein Rpdx1_1971 [Rhodopseudomonas palustris DX-1]
gi|315601046|gb|ADU43581.1| hypothetical protein Rpdx1_1971 [Rhodopseudomonas palustris DX-1]
Length = 379
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 147/252 (58%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I+SG+ W ++ + + ++ G S L PG+Y++ + G
Sbjct: 132 LALTARYGKDQPVINSGLIWRVYSDRPDDSGAIKLIREDHGATPSIPLPPGNYVVHVALG 191
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSP-IVDDELTFSIYSNP---NHK 154
V V+ +TV K +++ F+L AGG+R+ K GS I ++++FSIY N +
Sbjct: 192 LVSAVRPVTV--KADTERENFVLPAGGLRIEG--KVGSSRIPANQISFSIYKGSQFDNAQ 247
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
+ V +G + + Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT K
Sbjct: 248 RAPLLPGVAAGDVALVPEGTYYIVSNYGDANSVVRSDIRVQTGKLTDVTITHRAAVITLK 307
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVSE GGEA+A+T+WS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+V+
Sbjct: 308 LVSEKGGEALANTSWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERGFNVV 367
Query: 275 TGKSTIVEVLMR 286
G VEVL R
Sbjct: 368 NGVDGEVEVLAR 379
>gi|39936474|ref|NP_948750.1| hypothetical protein RPA3411 [Rhodopseudomonas palustris CGA009]
gi|39650330|emb|CAE28852.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 387
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 148/252 (58%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I+SG+ W ++ ++ + ++ G + L PG+Y++ + G
Sbjct: 140 LALAARYGKDQPVINSGLVWRVYSDKPDESGAIKLVREDHGATPNIPLPPGNYVVHVALG 199
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSP-IVDDELTFSIYSNP---NHK 154
V V+ +TV K +++ F+L AGG+R+ K GS I ++++F+IY N +
Sbjct: 200 LVSAVRPVTV--KSDAERENFVLPAGGLRIEG--KVGSSRIPSNQISFTIYKGSQFDNAQ 255
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
+ V +G + + Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT K
Sbjct: 256 RAPLLPSVAAGDVALVPEGTYYIVSNYGDANSVVRSDIRVQAGKLTDVTITHRAAVITLK 315
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVSE GGEA+A+T+WS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+V+
Sbjct: 316 LVSEKGGEALANTSWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERGFNVV 375
Query: 275 TGKSTIVEVLMR 286
G VEVL R
Sbjct: 376 NGVDGEVEVLAR 387
>gi|146339959|ref|YP_001205007.1| hypothetical protein BRADO2963 [Bradyrhizobium sp. ORS278]
gi|146192765|emb|CAL76770.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 249
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 147/252 (58%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
++ AR ++ +I+ G+ W +F ++ T ++ G + L PG+Y++ + G
Sbjct: 2 LSLSARYGKDLPNINGGLVWRVFADRPDETGTFKMLREDRGPTPNIVLPPGNYVVHVALG 61
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS-PIVDDELTFSIYSNPN---HK 154
V V+ TV+ K + ++ F+L AGG+RL + GS I ++++F+IY +
Sbjct: 62 LVSAVR--TVNLKAETDRESFLLPAGGLRLEG--RVGSTKIPQNQISFAIYKGSQFDGRE 117
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
I V +G ++ L Y I S+YG NA+V + ++V+ K+ DVT+ +RAA IT K
Sbjct: 118 RAPIVPNVAAGDILMLPEGTYYIVSNYGDANAVVRSDIRVQASKLTDVTVTHRAAVITLK 177
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVS+ GGEA+A+TAWS++ GD + ES A P +VLSEGDY IA+N+ + + R FSV+
Sbjct: 178 LVSDKGGEALANTAWSVINPGGDVIKESVGAFPKVVLSEGDYRAIAKNEGKVFERSFSVV 237
Query: 275 TGKSTIVEVLMR 286
G VEVL R
Sbjct: 238 NGVDGEVEVLAR 249
>gi|92117200|ref|YP_576929.1| hypothetical protein Nham_1651 [Nitrobacter hamburgensis X14]
gi|91800094|gb|ABE62469.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 348
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 148/259 (57%), Gaps = 9/259 (3%)
Query: 33 VVDAQRI-TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDY 91
V AQ + + AR ++ I+SG+ W ++ ++ ++ GG + L PG Y
Sbjct: 94 VAPAQAVLSLTARFGKDLPVINSGLIWRVYSDRPDETGVFKLMREDHGGTPNIVLPPGSY 153
Query: 92 LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP 151
++ S G V V+ +T+ K + F+L AGG+R+ S I ++++FSIY
Sbjct: 154 VVYVSLGLVSAVRPVTL--KPDADHETFVLPAGGLRIEGRVG-ASMIPPNQISFSIYKGS 210
Query: 152 N----HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNR 207
+A L+ + V +G ++ L Y I S YG N++V + ++V+ K+ DVTI +R
Sbjct: 211 QFEGTERAPLVPN-VTAGDVILLPEGTYYIVSTYGDANSVVRSDIRVQAAKLTDVTISHR 269
Query: 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNY 267
AA IT KLVS+ GGEA+A+TAWS+LT GD + ES A P ++L+EG+Y VIA+N+ + +
Sbjct: 270 AAVITLKLVSDKGGEALANTAWSVLTPGGDVIKESIGAFPRVILAEGEYRVIAKNEGKVF 329
Query: 268 SREFSVLTGKSTIVEVLMR 286
R F V+ G VEV+ R
Sbjct: 330 ERGFEVVNGVDGEVEVVAR 348
>gi|75675517|ref|YP_317938.1| hypothetical protein Nwi_1325 [Nitrobacter winogradskyi Nb-255]
gi|74420387|gb|ABA04586.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 349
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 145/252 (57%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
++ AR ++ +I+SG+ W ++ ++ ++ S L PGDY++ S G
Sbjct: 102 LSLTARYGKDLPAINSGLIWRVYSDRPDETGAFKLVREDHEATPSIALPPGDYVVHVSLG 161
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN----HK 154
V + +T+ S ++ F+L AGG+++ S I ++++FSIY +
Sbjct: 162 LVSAARPVTLRSDA--DRESFVLPAGGLKIEGRVG-ASMIPPNQISFSIYKGSQFEGTER 218
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
A L+ + V G ++ L Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT K
Sbjct: 219 APLLPN-VAGGDVMLLPEGTYYIVSNYGDANSVVRSDIRVQAGKLTDVTISHRAAVITLK 277
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVS+ GGEA+A+TAWS+LT GD + ES A P +VL+EG+Y VIA+N+ + + R F V
Sbjct: 278 LVSDKGGEALANTAWSVLTPGGDVIKESIGAFPRVVLAEGEYRVIAKNEGKVFERGFEVS 337
Query: 275 TGKSTIVEVLMR 286
G +EVL R
Sbjct: 338 NGVDGEIEVLAR 349
>gi|298291400|ref|YP_003693339.1| hypothetical protein Snov_1410 [Starkeya novella DSM 506]
gi|296927911|gb|ADH88720.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length = 345
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 138/260 (53%), Gaps = 19/260 (7%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
I AR +N I G+ W IF + F L PG Y++ S+G
Sbjct: 81 IGMSARFGDNDPFIPRGLVWRIFADRPEASGAYPLVAEAADPAPVFFLSPGGYVVHVSYG 140
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY---------- 148
V ++I V E+++++ +L+AGG+ L+S PI ++T+ I+
Sbjct: 141 LASVARRIVVG--EESRREQLLLSAGGVTLHSDVS-DKPIPAQKVTYDIFEGSFLQGRAA 197
Query: 149 SNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRA 208
S P ++ SG L+ L +Y + S YG+ NA++ V V PGK+ D T+ +RA
Sbjct: 198 SRPFYRG------ANSGELIVLPAGSYYVVSTYGEGNAVIQADVAVAPGKVTDATLHHRA 251
Query: 209 AKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYS 268
+I +LV GG+ + DT WS+LT GD+V ES N P+ VL+EG+YT +AR + + Y+
Sbjct: 252 GEIALRLVKVAGGDPLPDTQWSVLTPGGDSVKESINTLPTFVLAEGEYTAVARYEGKTYT 311
Query: 269 REFSVLTGKSTIVEVLMRQK 288
+EF+V +GK VEV++ ++
Sbjct: 312 KEFTVESGKDGPVEVMLGEQ 331
>gi|86749277|ref|YP_485773.1| FHA domain-containing protein [Rhodopseudomonas palustris HaA2]
gi|86572305|gb|ABD06862.1| FHA domain containing protein [Rhodopseudomonas palustris HaA2]
Length = 353
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 144/251 (57%), Gaps = 6/251 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ +I++G+ W ++ + + ++ G + L PG+Y++ + G
Sbjct: 106 LALTARYGKDLPAINAGLVWRVYSDRPDDSGAIKLIREEHGATPNIVLPPGNYVVHVAHG 165
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKA 155
V V+ +T+ K ++ FIL AGG+R+ G+ I ++++FSIY N +
Sbjct: 166 LVSAVRPVTL--KTDTDREAFILPAGGLRIEGRVG-GTRIPQNQISFSIYKGSQFENSQR 222
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+ +G + + Y I S+YG N++V + ++V GK+ DVT+ +RAA IT KL
Sbjct: 223 PPLVPNAAAGDVALVPEGTYYIVSNYGDANSVVRSDIRVTAGKLTDVTVTHRAAVITLKL 282
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
VS+ GGEA+A+TAWS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+V+
Sbjct: 283 VSDRGGEALANTAWSVLTPGGDVIKESIGAFPKVVLSEGEYRAIAKNEGKVFERGFNVVN 342
Query: 276 GKSTIVEVLMR 286
G VEVL R
Sbjct: 343 GVDGEVEVLAR 353
>gi|148256524|ref|YP_001241109.1| hypothetical protein BBta_5211 [Bradyrhizobium sp. BTAi1]
gi|146408697|gb|ABQ37203.1| hypothetical protein BBta_5211 [Bradyrhizobium sp. BTAi1]
Length = 284
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 145/252 (57%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
++ AR ++ +I+ G+ W +F ++ ++ G + L PG+Y++ + G
Sbjct: 37 LSLSARYGKDLPNINGGLVWRVFADRPDESGAFKMLREDRGATPNIVLPPGNYVVHVALG 96
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPG-SPIVDDELTFSIYSNPN---HK 154
V V+ + + K + ++ F+L AGG+RL + G S I ++++F+IY +
Sbjct: 97 LVSAVRAVNL--KAETDRESFVLPAGGLRLEG--RVGTSKIPPNQISFAIYKGSQFDGRE 152
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
I V +G ++ L Y I S+YG N++V + ++V+ K+ DVT+ +RAA IT K
Sbjct: 153 RAPIVPNVAAGDVLMLPEGTYYIVSNYGDANSVVRSDIRVQASKLTDVTVTHRAAVITLK 212
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVS+ GGEA+A+TAWS++ GD + ES A P +VLSEGDY IA+N+ + + R FSV+
Sbjct: 213 LVSDKGGEALANTAWSVINPGGDVIKESIGAFPKVVLSEGDYRAIAKNEGKVFERSFSVV 272
Query: 275 TGKSTIVEVLMR 286
G VEVL R
Sbjct: 273 NGVDGEVEVLAR 284
>gi|85715169|ref|ZP_01046153.1| hypothetical protein NB311A_01255 [Nitrobacter sp. Nb-311A]
gi|85698084|gb|EAQ35957.1| hypothetical protein NB311A_01255 [Nitrobacter sp. Nb-311A]
Length = 348
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 143/252 (56%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
++ AR ++ I+SG+ W ++ ++ ++ S L PG Y++ S G
Sbjct: 101 LSLTARYGKDLPVINSGLVWRVYSDRPDQTGAFKLVRENHDATPSIALPPGGYVVHVSLG 160
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN----HK 154
V + +T+ K ++ F+L AGG+++ S I ++++FSIY +
Sbjct: 161 LVSAARLVTL--KPDTDRESFVLPAGGLKIEGRVG-ASMIPPNQISFSIYKGSQFEGTER 217
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
A L+ + V G ++ L Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT K
Sbjct: 218 APLLPN-VSGGDIMLLPEGTYYIVSNYGDANSVVRSDIRVQAGKLTDVTISHRAAVITLK 276
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVS+ GGEA+A+TAWS+LT GD + ES A P ++L+EG+Y VIA+N+ + + R F V
Sbjct: 277 LVSDKGGEALANTAWSVLTPGGDVIKESIGAFPRVILAEGEYRVIAKNEGKVFERGFEVF 336
Query: 275 TGKSTIVEVLMR 286
G +EVL R
Sbjct: 337 NGVDGEIEVLAR 348
>gi|154245581|ref|YP_001416539.1| hypothetical protein Xaut_1636 [Xanthobacter autotrophicus Py2]
gi|154159666|gb|ABS66882.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
Length = 357
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 127/254 (50%), Gaps = 19/254 (7%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
AR + I G+ W +F + F L PG Y++ S+G V
Sbjct: 113 ARFGADGAPIPRGLVWRVFADQPESTGAFPLVAESSEATPVFFLNPGGYIVHVSYGFATV 172
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY----------SNPN 152
+++ + + +Q F + AG +RL + PI +LTF I+ S P
Sbjct: 173 AQRVQMGPLSR--RQAFEVAAGALRLSADVD-DKPIPAQKLTFDIFEGSFLQGRTSSQPY 229
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
++ +G +V L Y + S YG NA+V V V PGK+ D T+ +RAA+I
Sbjct: 230 YRG------ASAGEVVLLPEGTYHVVSTYGDANAVVRADVTVAPGKLTDATVHHRAAQIM 283
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV GGEA ADT W+++T GDT+ ES A P+ VLSEGDYT IAR +N+SRE
Sbjct: 284 LKLVKVAGGEAQADTQWTVITPGGDTIKESIGAFPTFVLSEGDYTAIARKDGKNFSREIK 343
Query: 273 VLTGKSTIVEVLMR 286
V GK+ +EVL +
Sbjct: 344 VEAGKNQEIEVLAK 357
>gi|115524342|ref|YP_781253.1| hypothetical protein RPE_2333 [Rhodopseudomonas palustris BisA53]
gi|115518289|gb|ABJ06273.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 357
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 141/252 (55%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I+ G+ W ++ ++ ++ + L PG Y++ + G
Sbjct: 110 LALSARYGKDLPVINGGLVWRVYSDRPDETGAFKLIREDRNATPNMVLPPGSYVVHVAHG 169
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP----NHK 154
V V+ +T+ K ++ F+L AGG+R+ S I ++++FSIY + +
Sbjct: 170 LVSAVRPVTI--KSDTDREAFVLPAGGLRIEGRVG-TSKIPQNQISFSIYKGSQFETSER 226
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
A L+ V +G +V L Y I S+YG N++V + ++V+ GK+ DV I +RAA IT K
Sbjct: 227 APLVP-SVAAGDVVLLPDGTYYIVSNYGDANSVVRSDIRVQAGKLTDVIITHRAAVITLK 285
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LVSE GGEA+A+TAWS++T GD V ES A P +VLSEG Y IA+N+ + + R F V+
Sbjct: 286 LVSEKGGEALANTAWSVITPGGDVVKESIGAFPRVVLSEGPYRAIAKNEGKVFERSFDVV 345
Query: 275 TGKSTIVEVLMR 286
G +EV+ R
Sbjct: 346 NGVDGEIEVMSR 357
>gi|91977735|ref|YP_570394.1| hypothetical protein RPD_3269 [Rhodopseudomonas palustris BisB5]
gi|91684191|gb|ABE40493.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 351
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 144/248 (58%), Gaps = 8/248 (3%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
AR ++ +I +G+ W ++ + + ++ G + L PG+Y++ + G V
Sbjct: 108 ARYGKDLPTISNGLVWRVYADKPDDGGQIKLVREDHGATPNIVLPPGNYVVHVAHGLVSA 167
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN----HKALLI 158
V+ + + + + ++ F+L AGG+R+ G+ I ++++FSIY +A L+
Sbjct: 168 VRPVAL--RAETDREAFVLPAGGLRIEGRVG-GTRIPQNQISFSIYKGSQFENTQRAPLV 224
Query: 159 TDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSE 218
+ +G +V + Y I S+YG N++V + ++V GK+ DV + +RAA IT KLVS+
Sbjct: 225 PNAA-AGDVVLVPEGTYYIVSNYGDANSVVRSDIRVTAGKLTDVAVTHRAAVITLKLVSD 283
Query: 219 MGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKS 278
GGEA+A+TAWS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+V+ G
Sbjct: 284 KGGEALANTAWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERGFNVVNGVD 343
Query: 279 TIVEVLMR 286
VEV+ R
Sbjct: 344 GEVEVMAR 351
>gi|158422573|ref|YP_001523865.1| hypothetical protein AZC_0949 [Azorhizobium caulinodans ORS 571]
gi|158329462|dbj|BAF86947.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 382
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 7/251 (2%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
AR + ++ V W +F + F L PG Y++ ++G+
Sbjct: 126 ARFGADGATVPRAVMWRVFADTPEASGAFPLVAESTEATPVFFLSPGGYIVHLTYGYATQ 185
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKV 162
+++ + + + ++ FIL AGG+RL + I + +++F IY + + +
Sbjct: 186 AQRVVLGATSR--REAFILPAGGLRLQADVD-NKAITNSKVSFDIYEGSFLQGRTSSQPL 242
Query: 163 RSGTL----VRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSE 218
G L V L Y + S YG NA+V V V+ GK+ D + +RAA+IT KLV E
Sbjct: 243 YRGALPNEVVLLPEGTYHVVSTYGDANAVVRADVTVQAGKLTDAMVHHRAAQITLKLVKE 302
Query: 219 MGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKS 278
GGEA+ADT WS++T GDT+ ES A P++VL+EG+Y IARN R SR+F V GK
Sbjct: 303 AGGEALADTQWSVITPGGDTIKESIGAFPTVVLTEGEYVAIARNDGRVVSRDFKVELGKD 362
Query: 279 TIVEVLMRQKR 289
VEVL R
Sbjct: 363 KDVEVLASGAR 373
>gi|90424617|ref|YP_532987.1| hypothetical protein RPC_3126 [Rhodopseudomonas palustris BisB18]
gi|90106631|gb|ABD88668.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 355
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 143/252 (56%), Gaps = 8/252 (3%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I + + W ++ ++ ++ G + L PG Y++ + G
Sbjct: 108 LALTARYGKDLPVIGNNLIWRVYSDRPDETGAFKLVREDRGATPNIVLPPGSYVVHVAHG 167
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN----HK 154
V V+ +T+ K + ++ F+L AGG+R+ S I ++++FSIY +
Sbjct: 168 LVSAVRPVTL--KSETDRESFVLPAGGLRIEGRVG-SSKIPQNQISFSIYKGSQFEVGER 224
Query: 155 ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
A L+ + V +G +V L Y I S+YG N++V + ++V+ GK+ DV I +RAA IT K
Sbjct: 225 APLLPN-VAAGDVVLLQEGTYYIISNYGDANSVVRSDIRVQAGKLTDVIITHRAAVITLK 283
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LV + GGEA+A+TAWS++T GD + ES A P +VLSEG+Y IA+N+ + + R F+V+
Sbjct: 284 LVGDKGGEALANTAWSVITPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERAFNVV 343
Query: 275 TGKSTIVEVLMR 286
G +EV+ R
Sbjct: 344 NGVDGEIEVIAR 355
>gi|299135306|ref|ZP_07028497.1| FHA domain containing protein [Afipia sp. 1NLS2]
gi|298590283|gb|EFI50487.1| FHA domain containing protein [Afipia sp. 1NLS2]
Length = 349
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 135/253 (53%), Gaps = 7/253 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+T AR ++ +I+ G+ W I+ + ++ L PG Y+I S G
Sbjct: 99 LTLSARFGKDMPAINGGLIWRIYSDKLGPNGAMHLIREERAAAPVIPLPPGGYVIHVSLG 158
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKA--- 155
V V+ +T+ +E+ ++ F L AGG+R+ S I ++ FSIY +
Sbjct: 159 LVSDVRPVTIR-QEETTRETFDLAAGGLRIEGRVG-TSKIPQGQIVFSIYKGSQFEIGTG 216
Query: 156 --LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
I V +G ++ L Y + S YG N+IV + ++V+ K+ DV + +RAA IT
Sbjct: 217 DRSPIAQNVAAGDVLMLPAGIYYLVSTYGDANSIVRSDIRVQAAKLTDVVVTHRAAVITL 276
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
KLV E GGEA+A+TAWS+LT +GD + ES A P ++L+EG+Y IA+N + + R+F V
Sbjct: 277 KLVGEKGGEALANTAWSVLTPAGDVIKESIGAFPRVMLAEGEYKAIAKNDGKVFERDFEV 336
Query: 274 LTGKSTIVEVLMR 286
G VEVL R
Sbjct: 337 KNGVDGEVEVLTR 349
>gi|304391868|ref|ZP_07373810.1| FHA domain-containing protein [Ahrensia sp. R2A130]
gi|303296097|gb|EFL90455.1| FHA domain-containing protein [Ahrensia sp. R2A130]
Length = 313
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 135/252 (53%), Gaps = 7/252 (2%)
Query: 38 RITCEARLTENSTSIDSGVSWHIF-DSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
R+ +L + + G+ W ++ D L GG +FDL G Y I A+
Sbjct: 64 RLVLSGKLVTDGPVLKDGMVWRVYRDRRGGDGEALPLIATATGGTGTFDLNAGTYFIHAA 123
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY---SNPNH 153
FG G K++ +S + ++ +L AGG++L + G PI ++L FSIY ++ +
Sbjct: 124 FGRAGAGKRVVLSGESSTEE--LVLEAGGLQL-AASAAGKPIPSEKLRFSIYEREADESG 180
Query: 154 KALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
+ LI V ++RL Y + S YG NA V ++V+ G++ +Q+R + I+
Sbjct: 181 ERQLIALNVAGDKIIRLKAGTYHVLSRYGTINATVRADLQVKAGELTKAELQHRGSPISL 240
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
+ VSE GG AVA+TAW++ TA G+ V S++ +PS+VL+EG+Y R + + F+V
Sbjct: 241 RAVSEAGGVAVANTAWTVFTADGEQVFASSSIAPSLVLAEGEYEAAVRYGAEEFRQPFTV 300
Query: 274 LTGKSTIVEVLM 285
TG+ +E+L+
Sbjct: 301 GTGEEKRIEILL 312
>gi|220926948|ref|YP_002502250.1| hypothetical protein Mnod_7208 [Methylobacterium nodulans ORS 2060]
gi|219951555|gb|ACL61947.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 299
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 144/258 (55%), Gaps = 22/258 (8%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISN--KKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
++ A LT I G++W I++ S+ + L+ +++ + +F L PG YL + +
Sbjct: 52 LSLRAVLTSEGKPIRGGLTWRIYEDRSDAGRPAILARSEE---AQPTFRLPPGSYLANVT 108
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYK----PGSPIVDDELTFSIY---- 148
+G V K++T++ + +NAG +RL PGS +L F+I+
Sbjct: 109 YGFVSTSKRVTLAPAGLTDQ--ITVNAGALRLAGAVGDARIPGS-----QLAFAIFVPIG 161
Query: 149 SNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRA 208
+NP + L+ D V++G L+RL Y + S +G NAI +KVE G+I D T+ +RA
Sbjct: 162 NNPEGR--LVRDGVKAGELIRLPEGTYHVVSTWGDSNAIQRADLKVENGRITDATLNHRA 219
Query: 209 AKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYS 268
A +T KLV+ G EA A TA+S+LT GDT+ E+ A P + L+EG+Y +IAR+ R Y+
Sbjct: 220 ATVTLKLVAAPGTEAFAGTAFSVLTPGGDTIREAIGAFPQVTLAEGEYQLIARHDGRVYT 279
Query: 269 REFSVLTGKSTIVEVLMR 286
++F V +G +E + +
Sbjct: 280 QDFKVESGVDRDIEAIAK 297
>gi|209884751|ref|YP_002288608.1| FHA domain containing protein [Oligotropha carboxidovorans OM5]
gi|209872947|gb|ACI92743.1| FHA domain containing protein [Oligotropha carboxidovorans OM5]
Length = 353
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 7/253 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I+ G+ W I+ + + ++ + L PG Y++ AS G
Sbjct: 103 LALSARFGKDLPVINGGLVWRIYSDKPSLNGAMQLVREEHAAGPTIPLPPGGYVVHASLG 162
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKA--- 155
V V +TV E ++ F L AGG+R+ S I ++ FS+Y +
Sbjct: 163 LVSDVHSLTVKQDE-TARETFELPAGGLRIEGRVG-TSKIPQGQIVFSVYKGSQFEIGTG 220
Query: 156 --LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
I + +G ++ L Y + S+YG N+IV + ++V+ K+ DV + +RAA IT
Sbjct: 221 DRAPIAQNIPAGDVLMLPAGIYYLVSNYGDANSIVRSDIRVQAAKLTDVVVTHRAAVITL 280
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
KLV E GGEA+A+T+WS++T +GD + ES A P ++L+EG+Y IA+N+ + + R+F V
Sbjct: 281 KLVGEKGGEALANTSWSVITPAGDVIKESTGAFPRVMLAEGEYRAIAKNEGKVFERDFEV 340
Query: 274 LTGKSTIVEVLMR 286
G VEVL+R
Sbjct: 341 KNGVDGEVEVLIR 353
>gi|170744337|ref|YP_001772992.1| hypothetical protein M446_6292 [Methylobacterium sp. 4-46]
gi|168198611|gb|ACA20558.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 312
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 142/254 (55%), Gaps = 14/254 (5%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISN--KKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
++ A LT I G++W I++ + K L+ + + + +F L PG YL + +
Sbjct: 65 LSLRAVLTSEGKPIRGGLTWRIYEDRGDAGKPALLARSDEP---QPTFRLAPGSYLANVT 121
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY----SNPN 152
+G V K++T++ Q QV + NAG +RL I +L F+I+ +NP
Sbjct: 122 YGFVSTSKRVTLAPTGL-QDQVTV-NAGALRLAGAVGDAR-IPPGQLAFAIFVPIGNNPE 178
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ L+ D V++G L+RL Y + S +G NAI +KVE G+I D T+ +RAA +T
Sbjct: 179 GR--LVRDGVKAGELIRLPEGTYHVVSTWGDSNAIQRADLKVENGRITDATLNHRAATVT 236
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV+ G EA A TA+S+LT GDT+ E+ A P + L+EG+Y +IAR+ + Y+++F
Sbjct: 237 LKLVAAPGTEAFAGTAFSVLTPGGDTIREAIGAFPQVTLAEGEYQLIARHDGKVYTQDFK 296
Query: 273 VLTGKSTIVEVLMR 286
V +G +E + +
Sbjct: 297 VESGVDRDIEAIAK 310
>gi|188581524|ref|YP_001924969.1| hypothetical protein Mpop_2272 [Methylobacterium populi BJ001]
gi|179345022|gb|ACB80434.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 306
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 141/254 (55%), Gaps = 14/254 (5%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIG----GKVSFDLFPGDYLIS 94
++ A ++ + SG++W ++ +N T I+ +F L G Y+++
Sbjct: 59 LSLSAVFAGSNGPVRSGLTWRVYG-----ENGDGTRPAIVARSNDPAPTFKLAAGAYVVT 113
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS--NPN 152
++G+ K+IT++ N +Q+ + AG ++L I ++L+FS+Y N
Sbjct: 114 VTYGYASASKRITMAGT-ANTEQLRVA-AGALKLSGAVG-DQKIPGNQLSFSVYVPIGTN 170
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ L+ +++G +VRL Y + S YG NAI ++VE GK+ D T+ +RAA +T
Sbjct: 171 SEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLRVENGKVTDATMNHRAATVT 230
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+EGDY +IAR+ + ++REF
Sbjct: 231 LKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAEGDYVLIARHDGQVFTREFK 290
Query: 273 VLTGKSTIVEVLMR 286
V +G +EV+ +
Sbjct: 291 VESGMDRDIEVVAK 304
>gi|163851741|ref|YP_001639784.1| hypothetical protein Mext_2318 [Methylobacterium extorquens PA1]
gi|163663346|gb|ABY30713.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 349
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 137/254 (53%), Gaps = 14/254 (5%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIG----GKVSFDLFPGDYLIS 94
+T A + I SG++W ++ +N T I+ +F L G Y+ +
Sbjct: 102 LTLSAVFVGANGPIRSGLTWRVYG-----ENGDGTRPAIVARSNDPAPTFKLAAGAYVAT 156
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS--NPN 152
++G+ K+IT++ N Q+ + AG ++L I ++L FS+Y N
Sbjct: 157 VTYGYASASKRITMAGT-ANTDQLRVA-AGALKLSGAVG-DQKIPGNQLGFSVYVPIGTN 213
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ L+ +++G +VRL Y + S YG NAI ++VE GK+ D T+ +RAA +T
Sbjct: 214 SEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLRVENGKVTDATMNHRAATVT 273
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+EGDY +IAR+ + ++REF
Sbjct: 274 LKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAEGDYVLIARHDGQVFTREFK 333
Query: 273 VLTGKSTIVEVLMR 286
V +G +EV+ +
Sbjct: 334 VESGMDRDIEVVAK 347
>gi|254561512|ref|YP_003068607.1| hypothetical protein METDI3099 [Methylobacterium extorquens DM4]
gi|254268790|emb|CAX24751.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 310
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 137/254 (53%), Gaps = 14/254 (5%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIG----GKVSFDLFPGDYLIS 94
+T A + I SG++W ++ +N T I+ +F L G Y+ +
Sbjct: 63 LTLSAVFVGANGPIRSGLTWRVYG-----ENGDGTRPAIVARSNDPAPTFKLAAGAYVAT 117
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS--NPN 152
++G+ K+IT++ N Q+ + AG ++L I ++L FS+Y N
Sbjct: 118 VTYGYASASKRITMAGT-ANTDQLRVA-AGALKLSGAVG-DQKIPGNQLGFSVYVPIGTN 174
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ L+ +++G +VRL Y + S YG NAI ++VE GK+ D T+ +RAA +T
Sbjct: 175 SEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLRVENGKVTDATMNHRAATVT 234
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+EGDY +IAR+ + ++REF
Sbjct: 235 LKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAEGDYVLIARHDGQVFTREFK 294
Query: 273 VLTGKSTIVEVLMR 286
V +G +EV+ +
Sbjct: 295 VESGMDRDIEVVAK 308
>gi|218530546|ref|YP_002421362.1| hypothetical protein Mchl_2593 [Methylobacterium chloromethanicum
CM4]
gi|218522849|gb|ACK83434.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 306
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 137/254 (53%), Gaps = 14/254 (5%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIG----GKVSFDLFPGDYLIS 94
+T A + I SG++W ++ +N T I+ +F L G Y+ +
Sbjct: 59 LTLSAVFVGANGPIRSGLTWRVYG-----ENGDGTRPAIVARSNDPAPTFKLAAGAYVAT 113
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS--NPN 152
++G+ K+IT++ N Q+ + AG ++L I ++L FS+Y N
Sbjct: 114 VTYGYASASKRITMAGT-ANTDQLRVA-AGALKLSGAVG-DQKIPGNQLGFSVYVPIGTN 170
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ L+ +++G +VRL Y + S YG NAI ++VE GK+ D T+ +RAA +T
Sbjct: 171 SEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLRVENGKVTDATMNHRAATVT 230
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+EGDY +IAR+ + ++REF
Sbjct: 231 LKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAEGDYVLIARHDGQVFTREFK 290
Query: 273 VLTGKSTIVEVLMR 286
V +G +EV+ +
Sbjct: 291 VESGMDRDIEVVAK 304
>gi|240138904|ref|YP_002963379.1| hypothetical protein MexAM1_META1p2319 [Methylobacterium extorquens
AM1]
gi|240008876|gb|ACS40102.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 310
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 133/241 (55%), Gaps = 14/241 (5%)
Query: 52 IDSGVSWHIFDSISNKKNTLSTTKKIIG----GKVSFDLFPGDYLISASFGHVGVVKKIT 107
I SG++W ++ +N T I+ +F L G Y+ + ++G+ K+IT
Sbjct: 76 IRSGLTWRVYG-----ENGDGTRPAIVARSNDPAPTFKLAAGAYVATVTYGYASASKRIT 130
Query: 108 VSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS--NPNHKALLITDKVRSG 165
++ N Q+ + AG ++L I ++L FS+Y N + L+ +++G
Sbjct: 131 MAGT-ANTDQLRVA-AGALKLSGAVG-DQKIPGNQLGFSVYVPIGTNSEGRLVRSGIKAG 187
Query: 166 TLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVA 225
+VRL Y + S YG NAI ++VE GK+ D T+ +RAA +T KLV+ G EA A
Sbjct: 188 EIVRLPEGTYHVVSSYGDSNAIQRADLRVENGKVTDATMNHRAATVTLKLVAAPGSEAFA 247
Query: 226 DTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLM 285
TA+S+LT GDT+ E+ A PS+ L+EGDY +IAR+ + ++REF V +G +EV+
Sbjct: 248 GTAFSVLTPGGDTIREAIGAFPSVTLAEGDYVLIARHDGQVFTREFKVESGMDRDIEVVA 307
Query: 286 R 286
+
Sbjct: 308 K 308
>gi|300022609|ref|YP_003755220.1| hypothetical protein Hden_1085 [Hyphomicrobium denitrificans ATCC
51888]
gi|299524430|gb|ADJ22899.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 353
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 136/271 (50%), Gaps = 16/271 (5%)
Query: 22 NNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSIS---NKKNTLSTTKKII 78
N + + +GK + + R+ A LT + ID G+ W IF S K L + +
Sbjct: 56 NTTVIEREGKTGLPSLRLV--ALLTGDGQQIDEGLVWRIFQSTGPTGKAKLVLESHE--- 110
Query: 79 GGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPI 138
L PGDY ++A+FG + +KI V + + F+LNAGG+RL +
Sbjct: 111 -ATPLVKLQPGDYTVNAAFGRANLTRKIAVKTGGP-PYEAFVLNAGGLRLGATVAGAP-A 167
Query: 139 VDDELTFSIYSNPNHKAL----LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
+T+SIY++ +H ++ + ++RL + Y+I S YG NA + V V
Sbjct: 168 APGAVTYSIYAD-DHDQFDSRSVVISGAKPNLIIRLNSGIYRIVSQYGDANAKIEADVTV 226
Query: 195 EPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEG 254
E GK+ + ++ + K TFKLV+ GGEAV DT W+I T G+ V ES A P+ VL+ G
Sbjct: 227 EAGKLTEASVTHTGGKATFKLVTRSGGEAVPDTRWTIQTDDGEMVKESVGALPTHVLAPG 286
Query: 255 DYTVIARNKERNYSREFSVLTGKSTIVEVLM 285
Y V A + Y F + G+ VEVLM
Sbjct: 287 KYIVTASSGGHLYKNRFEIADGEVKNVEVLM 317
>gi|182678787|ref|YP_001832933.1| hypothetical protein Bind_1816 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634670|gb|ACB95444.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 313
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 14/243 (5%)
Query: 55 GVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKN 114
GV+W IF+ + T + + L G YLI A++G G K++ +S +
Sbjct: 74 GVTWRIFEEAAQPNGTHKMLVESANAMPALPLPDGPYLIHAAYGLAGATKRVVLSGAPLS 133
Query: 115 QKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY--SNPNHKALLITDKVRSGTLVRLGT 172
++ +LNAG +R+ + +PI +L SIY N +A L+ ++G ++ L
Sbjct: 134 ER--IVLNAGALRIVGMLG-ETPISPAKLRISIYVPERGNSEAKLVLADGKAGDVIGLPE 190
Query: 173 NNYQITS---------HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEA 223
NY + S N++V+ +KV+ GKI D T+++ AA++T KLV+ GGEA
Sbjct: 191 GNYHVVSTILDTVSGGAVNTTNSVVNADLKVQAGKITDATLRHSAAQMTLKLVNNPGGEA 250
Query: 224 VADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEV 283
+A+TA++ILT GD + E A PS+VL+ G+Y IAR+ + Y F V++ VEV
Sbjct: 251 LANTAFTILTPGGDVIREMIGAFPSLVLAAGEYVAIARHDNKTYQTTFKVVSTLDRDVEV 310
Query: 284 LMR 286
L +
Sbjct: 311 LAK 313
>gi|170746714|ref|YP_001752974.1| hypothetical protein Mrad2831_0265 [Methylobacterium radiotolerans
JCM 2831]
gi|170653236|gb|ACB22291.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 305
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 135/257 (52%), Gaps = 18/257 (7%)
Query: 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF 97
+++ A L+ T++ G++W I++ + S + + F L PG Y+ + ++
Sbjct: 57 QLSLSALLSGPGTALRQGLAWRIYEDRGDGTRP-SIVARSTEAEPHFTLAPGAYVATVTY 115
Query: 98 GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDE------LTFSIYS-- 149
G K+I + + +R+ + + V D+ +TFS++
Sbjct: 116 GFASASKRIVMGGQPTTDT---------LRVAAGALKLAGAVGDQKIPPGQVTFSVFVPV 166
Query: 150 NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAA 209
N + L+ +++G L+RL Y + S YG+ NAI ++VE GK+ + T+ +RAA
Sbjct: 167 GTNSEGRLVRAGIKTGELLRLPEGTYHVVSTYGESNAIQRADLRVENGKVTEATLNHRAA 226
Query: 210 KITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSR 269
+T KLV+ G EA A TA+S+LT GDT+ E+ A P + L+EGDY +IAR+ + Y+R
Sbjct: 227 TVTLKLVAAPGAEAFAGTAFSVLTPGGDTIREAIGAFPQVTLAEGDYVLIARHDGQVYTR 286
Query: 270 EFSVLTGKSTIVEVLMR 286
EF V +G +EV+ +
Sbjct: 287 EFKVESGLDRDIEVVAK 303
>gi|218662036|ref|ZP_03517966.1| hypothetical protein RetlI_22423 [Rhizobium etli IE4771]
Length = 153
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 193 KVEPGKI-IDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVL 251
+V+ GK + TIQ+RAA+ITFKLVSE GGEA+ADTAWSILTA+GD+VGES +A P+MVL
Sbjct: 7 RVDAGKTGLRGTIQHRAAQITFKLVSEAGGEAIADTAWSILTAAGDSVGESVSAFPTMVL 66
Query: 252 SEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
+EG+Y+ +ARNK++ Y R+F V+ G++T VEVLM+ ++
Sbjct: 67 AEGEYSAVARNKDKIYQRDFKVVAGRNTDVEVLMKDQQ 104
>gi|254470478|ref|ZP_05083882.1| FHA domain containing protein [Pseudovibrio sp. JE062]
gi|211960789|gb|EEA95985.1| FHA domain containing protein [Pseudovibrio sp. JE062]
Length = 361
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 118/234 (50%), Gaps = 5/234 (2%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
A+L E + ++ G+ W ++ S N +L+ F L PG YL+ SFG V
Sbjct: 113 AKLAEGTPNLTRGLKWRVYSSKENADGSLNMVASSQDQDAEFRLDPGTYLVHTSFGKVTA 172
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLIT 159
+ + S K ILNAGGIRL + + +++ F+IY + LI
Sbjct: 173 TTRYELKSGVKTG--TIILNAGGIRLDAALGNDQKMPREDVRFNIYDMTYDATGDRGLIA 230
Query: 160 DKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEM 219
++ G LV + Y + S YG NA+V + V+ GK+ + T+ ++A IT KLVS
Sbjct: 231 SGIKPGELVPVSAGTYHVESRYGDINAVVRADIHVQAGKLTEATLYHQAGNITLKLVSAK 290
Query: 220 GGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
++A+T+W+IL+ GDTV A + L+ G YTV+ARN Y EF+V
Sbjct: 291 NKTSLANTSWTILSPGGDTVASGNGAFLDLTLAAGTYTVMARNNGEMYRDEFTV 344
>gi|296445038|ref|ZP_06886999.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
gi|296257459|gb|EFH04525.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length = 299
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 131/254 (51%), Gaps = 16/254 (6%)
Query: 48 NSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKIT 107
++ + G+ W IF+ + + +L G Y++ A+FG G +++
Sbjct: 44 DAAPVRGGIRWRIFEETPGDDGARRLVAETKDAAPAQELPDGVYIVHAAFGLAGATRRVV 103
Query: 108 VSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY--SNPNHKALLITDKVRSG 165
+ N + +LNAGG++L + +PI L SIY N +A L+ + G
Sbjct: 104 IEGG--NVSERLVLNAGGLKLIDMLG-DTPIPAQRLAISIYVPERGNSEAKLVLANAQGG 160
Query: 166 TLVRLGTNNYQITS--------HYGKYNA---IVSTVVKVEPGKIIDVTIQNRAAKITFK 214
++ L Y I S G NA +++ ++V GK+I+ T+++RAA +T K
Sbjct: 161 EILCLPEGAYHIVSTLLDTTQGSQGDNNATNSVITADLRVAAGKLIEATLRHRAATMTLK 220
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LV++ GGEA+A+T++S+LT GD + E A PS+VL+EG+Y VIAR+ + Y F V
Sbjct: 221 LVNQRGGEALANTSFSVLTPGGDVIRELIGAFPSLVLAEGEYVVIARHDGKTYQETFRVQ 280
Query: 275 TGKSTIVEVLMRQK 288
+ + VE+ R +
Sbjct: 281 STQDREVEISARAE 294
>gi|323137839|ref|ZP_08072914.1| hypothetical protein Met49242DRAFT_2302 [Methylocystis sp. ATCC
49242]
gi|322396842|gb|EFX99368.1| hypothetical protein Met49242DRAFT_2302 [Methylocystis sp. ATCC
49242]
Length = 331
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 16/252 (6%)
Query: 48 NSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKIT 107
++ + SGV W IF+ + + + + L G Y++ AS+G GV ++I
Sbjct: 73 DAQPVRSGVVWRIFEERAQPDGSHKLVAQSEEAAPTLPLPDGAYVVHASYGLAGVTRRIV 132
Query: 108 VSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY--SNPNHKALLITDKVRSG 165
V + N + LNAGG+++ + + I L+ SIY N +A L+ R
Sbjct: 133 VEGR--NISERVPLNAGGLKIVDMLG-ETKIPPQRLSISIYVPERGNSEAKLVLANARGD 189
Query: 166 TLVRLGTNNYQITSHY-----------GKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFK 214
++ L +Y I S N++V+ +KV GK+I+ T+++ AA +T K
Sbjct: 190 EIISLPEGSYHIVSTLLDTTQGAQGGNNATNSVVTADLKVPAGKLIEATLKHHAATMTLK 249
Query: 215 LVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
LV GGEA+A+T +S+LT GD + E A PS+VL+EG+Y IAR++ + + F V
Sbjct: 250 LVKAPGGEALANTTFSVLTPGGDVIRELIGAFPSLVLAEGEYVAIARHEGKTFQNTFRVQ 309
Query: 275 TGKSTIVEVLMR 286
+ K VEV+ +
Sbjct: 310 STKDADVEVIAK 321
>gi|217976637|ref|YP_002360784.1| hypothetical protein Msil_0448 [Methylocella silvestris BL2]
gi|217502013|gb|ACK49422.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 330
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 21/253 (8%)
Query: 48 NSTSIDSGVSWHIFDSISNKKNTLSTTKKIIG----GKVSFDLFPGDYLISASFGHVGVV 103
++ + GV W +F N++ L + ++ + L G +++ A+FG G
Sbjct: 85 DAQPLRGGVHWRVF----NERVELDGSHVLVAESTDSTPALTLPDGAFIVHAAFGLAGAT 140
Query: 104 KKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS-PIVDDELTFSIYSNPNHKALLITDKV 162
K++T+ K +++ LNAG +R+ + P +++ + N +A L+ + +
Sbjct: 141 KRVTIEGKGVSER--VALNAGALRIMGLLGDAPLPATKSQISVYVPERNNSEAKLVAN-I 197
Query: 163 RSGTLVRLGTNNY---------QITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
+SG + L NY Q T N++++ ++V+ GK+ D ++++RAA +T
Sbjct: 198 KSGETIGLPEGNYHVVSTLLDPQTTGAVNPTNSVINADLRVQAGKLTDASLRHRAATMTL 257
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
KLVS GEA+A+T+++ILT GD + E A PS+VL+EG+Y IAR+ Y F V
Sbjct: 258 KLVSGPSGEALANTSFTILTPGGDVIREMIGAFPSLVLAEGEYVAIARHDNNVYQTNFKV 317
Query: 274 LTGKSTIVEVLMR 286
+ VEVL +
Sbjct: 318 ESTLDRDVEVLAK 330
>gi|218506264|ref|ZP_03504142.1| hypothetical protein RetlB5_01007 [Rhizobium etli Brasil 5]
Length = 217
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Query: 21 LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGG 80
LN I+ G + + EA+LT + T ++ G+SW++F I+ L GG
Sbjct: 68 LNAFIAPGTAPDAAKLRDVAMEAKLTADGTPVEDGLSWYVFSPIAGTDGKLPLIASAKGG 127
Query: 81 KVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVD 140
+F L PGDY ++ SFG GV KK+TV + + KQV +L+AGG+ L ++ + I
Sbjct: 128 PAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVDKQVMVLDAGGLLLNAVSGTDARIRP 187
Query: 141 DELTFSIYS----NPNHKALLITD 160
DEL+FSIYS + + L++ D
Sbjct: 188 DELSFSIYSSEVRDDGERGLVVAD 211
>gi|218662646|ref|ZP_03518576.1| hypothetical protein RetlI_26162 [Rhizobium etli IE4771]
Length = 155
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 12 ENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKN 69
+ + +TS + LN I+ G + + EA+LT + T+++ G+SW++F I+
Sbjct: 48 KQLDSTSKMPKLNAFIAPGTAPEGAKLRDVAMEAKLTTDGTAVEDGLSWYVFSPIAGPDG 107
Query: 70 TLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQ 117
L GG +F L PGDY ++ SFG GV KK+TV + + KQ
Sbjct: 108 KLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVDKQ 155
>gi|300022610|ref|YP_003755221.1| von Willebrand factor A [Hyphomicrobium denitrificans ATCC 51888]
gi|299524431|gb|ADJ22900.1| von Willebrand factor type A [Hyphomicrobium denitrificans ATCC
51888]
Length = 638
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 7/204 (3%)
Query: 81 KVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVD 140
+ SF L G Y SA G V ++I + + E KQ L ++L ++ GSP
Sbjct: 438 EASFVLPSGTYYASARSGAADVRQRIAIGAGE-TVKQTLTLALAPLKLSTVVA-GSPATA 495
Query: 141 DE-LTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKI 199
+ + + I KA I V L Y++T+ Y + +E GK
Sbjct: 496 AQGIVYRIDKADGDKAR-IARAVGPDAAFSLPPGRYKVTATLAAYPLSTAQDFTLEAGKP 554
Query: 200 IDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVI 259
++ T++ ++F+ +++ A +D W ++ +SG V +L+ G Y V
Sbjct: 555 VEATLRIEGGMVSFRPPADI---ATSDVYWEVMDSSGAPVWRKTGRDAKTLLAPGRYKVR 611
Query: 260 ARNKERNYSREFSVLTGKSTIVEV 283
++ +F V G++ VE+
Sbjct: 612 VESQSTRRETDFDVRAGETKEVEI 635
>gi|260463531|ref|ZP_05811730.1| von Willebrand factor type A [Mesorhizobium opportunistum WSM2075]
gi|259030622|gb|EEW31899.1| von Willebrand factor type A [Mesorhizobium opportunistum WSM2075]
Length = 552
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
A L E + G +W ++ + S+ S T + G +L PGDY+I A G V
Sbjct: 235 AVLAEGGDPVTDGNAWEVYKAKSDGTRGDSVTTEY--GAYKANLEPGDYVIVARDGEAKV 292
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKA 155
+K+ + + + K +F LNAG + ++ G+ +VD Y + ++ A
Sbjct: 293 EQKVKIEAGQV-AKPLFTLNAGTLVIHPRPSAGADVVDGAAVVIDYPSADNPA 344
>gi|310822003|ref|YP_003954361.1| hypothetical protein STAUR_4755 [Stigmatella aurantiaca DW4/3-1]
gi|309395075|gb|ADO72534.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 990
Score = 42.4 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 67 KKNTLSTTKKIIGGKVSFD-LFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGG 125
K + L+ + G F LFP + +++A G +G V +I + Q + + AG
Sbjct: 281 KADHLARQARAEGAPARFTGLFPDEVVVTAEAGSLGSVPRIVTLDEAVTQVTLELEEAGR 340
Query: 126 IRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVR---LGTNNYQITSHYG 182
+ + + + G P+ E+T N ++ +KV++G LV LG +Y + H
Sbjct: 341 LFVTVVDEAGEPVPQPEVTLRT----NKGEVIRHEKVQTGALVELGPLGVGDYTLVGHAE 396
Query: 183 KYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGES 242
+ V +V+ G+ RA I+ +++ E G A + ++ +GD V
Sbjct: 397 GFRD-VELPARVKAGETSLELEMARATLISGQVMDEYGRPAPGVSV--LVQPTGDAVLAD 453
Query: 243 ANAS-PSMVLSEGDYTVIARNKE 264
A+ + V + G Y + A + E
Sbjct: 454 ADGHFSAQVPTPGLYELHAHHSE 476
>gi|115380774|ref|ZP_01467654.1| putative efflux protein [Stigmatella aurantiaca DW4/3-1]
gi|115362219|gb|EAU61574.1| putative efflux protein [Stigmatella aurantiaca DW4/3-1]
Length = 454
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 40 TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSF-DLFPGDYLISASFG 98
T E R+T + + ++ K + L+ + G F LFP + +++A G
Sbjct: 102 TLEVRVTRDGAPAAA--------TVRLKADHLARQARAEGAPARFTGLFPDEVVVTAEAG 153
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLI 158
+G V +I + Q + + AG + + + + G P+ E+T N ++
Sbjct: 154 SLGSVPRIVTLDEAVTQVTLELEEAGRLFVTVVDEAGEPVPQPEVTLRT----NKGEVIR 209
Query: 159 TDKVRSGTLVRLGT---NNYQITSH 180
+KV++G LV LG +Y + H
Sbjct: 210 HEKVQTGALVELGPLGVGDYTLVGH 234
>gi|168015010|ref|XP_001760044.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688794|gb|EDQ75169.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 18 STLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKI 77
S +++ SKG G + QR + ++ S++I++ V HIF ++T + T K+
Sbjct: 98 SQYVSHRQSKGYGVIIDIGQR-----QQSQYSSNIEARV--HIF----TFEDTNALTVKV 146
Query: 78 IGGKVS---FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYK 133
+G K S FD G+Y S SFG + V K V E+ Q ++++L GG++ I K
Sbjct: 147 LGEKPSRVLFDESSGEYDASTSFGELLVFAKELVPELERLQTRLYVLGTGGLQWAPIAK 205
>gi|46204414|ref|ZP_00050037.2| hypothetical protein Magn03003728 [Magnetospirillum magnetotacticum
MS-1]
Length = 198
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFD--------SISNKKNTLSTTKKIIGGKVSFDLFPGD 90
+T A + I SG++W I++ +I + N + T F L G
Sbjct: 59 LTLSAVFAGANLPIRSGLAWRIYEDRGEAGRPAIVARSNDPAPT---------FKLAAGA 109
Query: 91 YLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS- 149
Y+ + ++G+ K+IT+S ++ + AG ++L I +L FS++
Sbjct: 110 YVATVTYGYASASKRITMSGNPSREE--LRVAAGALKLSGAVS-DQRIPAAQLAFSVFVP 166
Query: 150 -NPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
N + L+ +++G +VRL Y + S+
Sbjct: 167 IGTNSEGRLVRSGIKAGEIVRLPEGTYHVVSN 198
>gi|319954050|ref|YP_004165317.1| alpha amylase catalytic region [Cellulophaga algicola DSM 14237]
gi|319422710|gb|ADV49819.1| alpha amylase catalytic region [Cellulophaga algicola DSM 14237]
Length = 1114
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 233 TASGDTVG-ESANASPSMV-LSEGDYTVIARNKERNYSREFSVLTGKSTIVEV 283
T SGD G E+ N S S L+ G+YT+ R +E NYS+ + V+ G+ + V
Sbjct: 915 TVSGDATGSEAFNTSTSFTDLAAGNYTICIRVEEENYSQCYEVMIGEPEALTV 967
>gi|148255862|ref|YP_001240447.1| surface antigen domain-containing protein [Bradyrhizobium sp.
BTAi1]
gi|146408035|gb|ABQ36541.1| putative exported protein of unknown function with surface antigen
domain [Bradyrhizobium sp. BTAi1]
Length = 852
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 150 NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAA 209
+P K L+T K+ G R+G+ ++Q T N++ T +V G + +V ++
Sbjct: 259 DPERKGFLVTFKIEEGQQYRVGSVDFQSTIPTLDPNSL-RTFSRVNVGSLYNVESLEKS- 316
Query: 210 KITFKLVSEMGGEAV-ADTAWSILTASGDTVGESANASPSMVLSEGDYTVIAR------N 262
V EM EA A++++ GD E+ S + EG T I R
Sbjct: 317 ------VEEMQIEASRRGYAFAVVRPRGDRNFEAHTVSVVFAIDEGPRTYIERINIRGNT 370
Query: 263 KERNY--SREFSVLTGKSTIVEVLMRQKRMDKN 293
+ R+Y REF + G + ++ R +R KN
Sbjct: 371 RTRDYVIRREFDISEGDAYNRALVDRAERRLKN 403
>gi|319782123|ref|YP_004141599.1| von Willebrand factor type A [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168011|gb|ADV11549.1| von Willebrand factor type A [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 554
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISN--KKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHV 100
A L E + G +W I+ + + + + +ST G +L PGDY++ AS G
Sbjct: 237 AVLAEGGDPVTDGNAWEIYKAKPDGTRGDYVSTEY----GAYKANLEPGDYIVVASDGQA 292
Query: 101 GVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVD 140
+K+ + + + + +F LNAG + ++ G+ +VD
Sbjct: 293 KTEQKVKIEAGQVYEP-LFNLNAGTLIIHPRPSEGADVVD 331
Searching..................................................done
Results from round 2
>gi|86357811|ref|YP_469703.1| hypothetical protein RHE_CH02195 [Rhizobium etli CFN 42]
gi|86281913|gb|ABC90976.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 367
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 125/291 (42%), Positives = 187/291 (64%), Gaps = 5/291 (1%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSI 64
++ + + +TS + LN I+ G + I EA+LT + T ++ G+SW++F I
Sbjct: 29 AFKGFKQLDSTSKMPKLNAFIAPGAAPEGAKLRDIEMEAKLTADGTPVEDGLSWYVFSPI 88
Query: 65 SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG 124
+ L GG +F L PGDY ++ SFG GV KK+TV + + KQV +L+AG
Sbjct: 89 AGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVDKQVMVLDAG 148
Query: 125 GIRLYSIYKPGSPIVDDELTFSIYSNP---NHKALLITDKVRSGTLVRLGTNNYQITSHY 181
G+ L ++ + I D+L+FSIYS+ + + L+ V T+VRL Y I S Y
Sbjct: 149 GLLLNAVSGTDARIRPDQLSFSIYSSEVRDDGERGLVVADVSPNTVVRLNAGTYHIVSEY 208
Query: 182 GKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGE 241
G NAI+ ++VE GK+ + TIQ+RAA++TFKLVSE GGEA+ADTAWSILTA+GD+VGE
Sbjct: 209 GSVNAIIRADIQVEAGKLTEATIQHRAAQMTFKLVSEAGGEAIADTAWSILTAAGDSVGE 268
Query: 242 SANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
S +A P+MVL+EG+Y+ +ARNK++ Y R+F+V+ G++T VEVLM+ + +
Sbjct: 269 SVSAFPTMVLAEGEYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQEPQQ 319
>gi|190891874|ref|YP_001978416.1| hypothetical protein RHECIAT_CH0002283 [Rhizobium etli CIAT 652]
gi|190697153|gb|ACE91238.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 365
Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats.
Identities = 126/295 (42%), Positives = 186/295 (63%), Gaps = 4/295 (1%)
Query: 3 ISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFD 62
+F + + E+ LN I+ G + + EA+LT + T ++ G+SW++F
Sbjct: 28 DAFKDFKQIESTPKM-PKLNAFIAPGTAPEAAKLRDVAMEAKLTADGTPVEDGLSWYVFS 86
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
I+ L GG +F L PGDY ++ SFG GV KK+TV + + KQV +L+
Sbjct: 87 PIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVDKQVMVLD 146
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNP---NHKALLITDKVRSGTLVRLGTNNYQITS 179
AGG+ L ++ + I DEL+FSIYS+ + + L+ V T+VRL Y I S
Sbjct: 147 AGGLLLNAVSGTDARIRPDELSFSIYSSEVRDDGERGLVVADVSPNTVVRLNAGTYHIVS 206
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV 239
YG NA++ ++VE GK+ + TIQ+RAA+ITFKLVSE GGEA+ADTAWSILTA+GD+V
Sbjct: 207 EYGNVNAVIRADIQVEAGKLTEATIQHRAAQITFKLVSEAGGEAIADTAWSILTAAGDSV 266
Query: 240 GESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNG 294
GES +A P+MVL+EG+Y+ +ARNK++ Y R+F+V+ GK+T VEVLM+ ++ +
Sbjct: 267 GESVSAFPTMVLAEGEYSAVARNKDKIYQRDFTVVAGKNTDVEVLMKDQQPQQPA 321
>gi|327188319|gb|EGE55537.1| hypothetical protein RHECNPAF_910012 [Rhizobium etli CNPAF512]
Length = 365
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 126/295 (42%), Positives = 186/295 (63%), Gaps = 4/295 (1%)
Query: 3 ISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFD 62
+F + + E+ LN I+ G + + EA+LT + T ++ G+SW++F
Sbjct: 28 DAFKDFKQIESTPKM-PKLNAFIAPGTAPDAAKLRDVAMEAKLTADGTPVEDGLSWYVFS 86
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
I+ L GG +F L PGDY ++ SFG GV KK+TV + + KQV +L+
Sbjct: 87 PIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVNKQVMVLD 146
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNP---NHKALLITDKVRSGTLVRLGTNNYQITS 179
AGG+ L ++ + I DEL+FSIYS+ + + L+ V T+VRL Y I S
Sbjct: 147 AGGLLLNAVSGTDARIRPDELSFSIYSSEVRDDGERGLVVADVSPNTVVRLNAGTYHIVS 206
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV 239
YG NA++ ++VE GK+ + TIQ+RAA+ITFKLVSE GGEA+ADTAWSILTA+GD+V
Sbjct: 207 EYGNVNAVIRADIQVEAGKLTEATIQHRAAQITFKLVSEAGGEAIADTAWSILTAAGDSV 266
Query: 240 GESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNG 294
GES +A P+MVL+EG+Y+ +ARNK++ Y R+F+V+ GK+T VEVLM+ ++ +
Sbjct: 267 GESVSAFPTMVLAEGEYSAVARNKDKIYQRDFTVVAGKNTDVEVLMKDQQPQQPA 321
>gi|241204764|ref|YP_002975860.1| hypothetical protein Rleg_2043 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858654|gb|ACS56321.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 366
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 122/292 (41%), Positives = 185/292 (63%), Gaps = 4/292 (1%)
Query: 3 ISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFD 62
+F + + E+ L+ I+ G V + + EA+LT + T ++ G+SW++F
Sbjct: 28 DAFKEFKQLESTPKM-PKLDAFIAPGTVPDGVKLRDVPMEAKLTADGTPVEEGLSWYVFS 86
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
I+ L GG +F L PGDY ++ SFG GV KK+TV + + KQV +L+
Sbjct: 87 PIAGADGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEIDKQVMVLD 146
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNP---NHKALLITDKVRSGTLVRLGTNNYQITS 179
AGG+ L ++ + I D+L+FSIYS+ + + L+ + T+VRL Y I S
Sbjct: 147 AGGLLLNAVSGADARIRPDQLSFSIYSSEVRDDGERGLVMADISPNTVVRLNAGTYHIVS 206
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV 239
YG NA++ ++VE GK+ + TIQ+RAA+ITFKLVS+ GGEA+ADTAWSILTA+GD+V
Sbjct: 207 EYGSVNAVIRADIQVEAGKLTEATIQHRAAQITFKLVSDAGGEAIADTAWSILTAAGDSV 266
Query: 240 GESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMD 291
GES +A P+MVL+EG Y+ +ARNK++ Y R+F+V+ G++T VEVLM+ ++
Sbjct: 267 GESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQPQ 318
>gi|209549438|ref|YP_002281355.1| hypothetical protein Rleg2_1844 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535194|gb|ACI55129.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 366
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 122/290 (42%), Positives = 186/290 (64%), Gaps = 5/290 (1%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSI 64
++ + + + +TS + L+ I+ G V + + EA+LT + T ++ G+SW++F I
Sbjct: 29 AFKEFKQLESTSKMPKLDAFIAPGTAPEGVKLRDVPMEAKLTADGTPVEEGLSWYVFSPI 88
Query: 65 SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG 124
+ L GG +F L PGDY ++ SFG GV KK+TV + KQV +L+AG
Sbjct: 89 AGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGAVDKQVMVLDAG 148
Query: 125 GIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
G+ L ++ + I D+L+FSIYS + + L+ V T+VRL Y I S Y
Sbjct: 149 GLLLNAVSGTDARIRPDQLSFSIYSSEVREDGERGLVVADVSPNTVVRLNAGTYHIVSEY 208
Query: 182 GKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGE 241
G NA++ ++VE GK+ + TIQ+RAA++TFKLVS+ GGEA+ADTAWSILTA+GD+VGE
Sbjct: 209 GSVNAVIRADIQVEAGKLTEATIQHRAAQVTFKLVSDAGGEAIADTAWSILTAAGDSVGE 268
Query: 242 SANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMD 291
S +A P+MVL+EG Y+ +ARNK++ Y R+F+V+ G++T VEVLM+ ++
Sbjct: 269 SVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQPQ 318
>gi|116252273|ref|YP_768111.1| hypothetical protein RL2527 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256921|emb|CAK08015.1| conserved hypothetical exported protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 366
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 123/292 (42%), Positives = 186/292 (63%), Gaps = 4/292 (1%)
Query: 3 ISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFD 62
+F + + E+ L+ I+ G V + + EA+LT + T ++ G+SW++F
Sbjct: 28 DAFKEFKQLESTPKM-PKLDAFIAPGTVPAGVKLRDVPMEAKLTADGTPVEEGLSWYVFS 86
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
I+ L GG +F L PGDY ++ SFG GV KK+TV ++ + KQV +L+
Sbjct: 87 PIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPAEGEVDKQVMVLD 146
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNP---NHKALLITDKVRSGTLVRLGTNNYQITS 179
AGG+ L ++ + I D+L+FSIYS+ + + L+ V T+VRL Y I S
Sbjct: 147 AGGLLLNAVSGADARIRPDQLSFSIYSSEVRDDGERGLVVADVSPNTVVRLNAGTYHIVS 206
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV 239
YG NA++ ++VE GK+ + TIQ+RAA+ITFKLVS+ GGEA+ADTAWSILTA+GD+V
Sbjct: 207 EYGSVNAVIRADIQVEAGKLTEATIQHRAAQITFKLVSDTGGEAIADTAWSILTAAGDSV 266
Query: 240 GESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMD 291
GES +A P+MVL+EG Y+ +ARNK++ Y R+F+V+ G++T VEVLM+ ++
Sbjct: 267 GESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQPQ 318
>gi|254780160|ref|YP_003064573.1| hypothetical protein CLIBASIA_00215 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039837|gb|ACT56633.1| hypothetical protein CLIBASIA_00215 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 298
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 298/298 (100%), Positives = 298/298 (100%)
Query: 1 MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI
Sbjct: 1 MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI
Sbjct: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH
Sbjct: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG
Sbjct: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT 298
ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT
Sbjct: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT 298
>gi|150396276|ref|YP_001326743.1| hypothetical protein Smed_1055 [Sinorhizobium medicae WSM419]
gi|150027791|gb|ABR59908.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 349
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 118/295 (40%), Positives = 173/295 (58%), Gaps = 15/295 (5%)
Query: 2 TISFSSY------AKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSG 55
T +F S+ K + S L+ + I G+ K + EA LT+ + SG
Sbjct: 49 TDAFKSFPSVSGTHKMPKLTGFSPLITDPIQGGELKD------VKLEALLTDQGEPVQSG 102
Query: 56 VSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQ 115
++W +F I L GG +F+L PG+Y ++ +FG G +KI V
Sbjct: 103 LTWRVFSPIPGSDGKLPLLATSEGGSTAFNLVPGEYFVNVAFGRAGATRKIRVPEDGPAD 162
Query: 116 KQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGT 172
KQV +L+AGG+ L ++ I +EL+FSI+S+ + + L+ V+ GTLVRL
Sbjct: 163 KQVLVLDAGGVMLNAVSGSDVRIPPNELSFSIFSSDVKEDGERGLVVADVKPGTLVRLNA 222
Query: 173 NNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSIL 232
Y + S+YG NA++ +++E GK+ + TIQ+RAAK+T KLVSE GGEA+ADTAWSIL
Sbjct: 223 GTYHVVSNYGAVNAVIRADIQIEAGKLTEATIQHRAAKLTLKLVSEAGGEAIADTAWSIL 282
Query: 233 TASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
T+SGD V ES A P++VL+EG YT +ARNK++ Y R+F+V G +T VEVL+
Sbjct: 283 TSSGDVVSESVGAFPTLVLAEGGYTAVARNKDKIYQRDFAVQAGVNTDVEVLLDG 337
>gi|49474353|ref|YP_032395.1| hypothetical protein BQ07670 [Bartonella quintana str. Toulouse]
gi|49239857|emb|CAF26251.1| hypothetical protein BQ07670 [Bartonella quintana str. Toulouse]
Length = 336
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 103/294 (35%), Positives = 166/294 (56%), Gaps = 9/294 (3%)
Query: 4 SFSSYAKAENMHTTSTLLNNNISKGKGKR---VVDAQRITCEARLTENSTSIDSGVSWHI 60
+FS + + + + N ISK + + +V ++ ARLT +S ++ G+ W +
Sbjct: 41 AFSEEVREQELQKEQS--TNFISKSQDREKENLVSQSQLILHARLTNSSENVVKGLIWRV 98
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
+ I N L GG F+L PG YL+ SFGH V I++ + + K F
Sbjct: 99 YAPILGIDNKLPLIASYEGGSAHFNLEPGSYLVHVSFGHASAVHHISLQNGQSLVKN-FN 157
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLGTNNYQIT 178
L+AGG+ L + G+ I + EL F+IY + N +I V+ ++VRL Y +
Sbjct: 158 LDAGGVLLNATLLNGT-INEKELRFTIYEDEKENDDTGVILSNVKPLSIVRLKAGRYHVA 216
Query: 179 SHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT 238
SHYG N IV + ++V+ GKI +VT++++AA+I FKLV + GGEA+ADT+WSI SGD
Sbjct: 217 SHYGSINVIVHSDIQVDAGKITEVTLEHQAAQIVFKLVRQEGGEALADTSWSITNDSGDI 276
Query: 239 VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
+ E+ A S+VL+EG Y IA+NK++ Y + FSV++G + ++ + + M +
Sbjct: 277 IYETVGAYVSLVLAEGKYIAIAKNKDQIYQKAFSVVSGHDEDISLVAKVQNMQQ 330
>gi|15965179|ref|NP_385532.1| hypothetical protein SMc01011 [Sinorhizobium meliloti 1021]
gi|307309193|ref|ZP_07588864.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307321523|ref|ZP_07600918.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15074359|emb|CAC46005.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306892830|gb|EFN23621.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306900339|gb|EFN30955.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 331
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 114/287 (39%), Positives = 170/287 (59%), Gaps = 9/287 (3%)
Query: 4 SFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDS 63
S S K + S L+ + G+ K + EA LT+ + SG++W +F
Sbjct: 39 SISGTHKMPKLTGFSPLITDPTQGGQLKD------VELEALLTDKGKPVQSGLTWRVFSP 92
Query: 64 ISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA 123
I L GG +F+L PG+Y ++ +FG G +KI V KQV +L+A
Sbjct: 93 IPGSDGKLPLLATSEGGSTAFNLVPGEYFVNVAFGRAGATRKIRVPEDGPLDKQVLVLDA 152
Query: 124 GGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGTNNYQITSH 180
GG+ L ++ I +EL+FSI+S+ + + L+ V+ GT+V+L + Y + S+
Sbjct: 153 GGVMLNAVSGSDVRIPPNELSFSIFSSDVKEDGERGLVVADVKPGTVVQLNADTYHVVSN 212
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YG NA++ +++E GK+ + TIQ+RAAK+T KLVSE GGEA+ADTAWSILT+SGD V
Sbjct: 213 YGSVNAVIRADIQIEAGKLTEATIQHRAAKLTLKLVSEAGGEAIADTAWSILTSSGDVVS 272
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
ES A P++VL+EG YT +ARNK++ Y R+F+V G +T VEVL+
Sbjct: 273 ESVGAFPTLVLAEGSYTAVARNKDKIYQRDFAVKAGVNTDVEVLLNG 319
>gi|222148639|ref|YP_002549596.1| hypothetical protein Avi_2219 [Agrobacterium vitis S4]
gi|221735625|gb|ACM36588.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 328
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 115/299 (38%), Positives = 174/299 (58%), Gaps = 7/299 (2%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSI 64
++ + + +T+ + LN + ++ I EA+L + G+ W ++ I
Sbjct: 29 AFKSFKQLDSTAKMPKLNAFSTPIAPAPQSHSKLIRFEAKLDNEGQPLQQGLEWRVYSPI 88
Query: 65 SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG 124
+ L GG L PGDY ++ SFG GV +K+ V + + QKQV +L+AG
Sbjct: 89 AGSDGKLPMVASSQGGSAELQLAPGDYFVNVSFGRAGVTRKLDVPTDGEVQKQVMVLDAG 148
Query: 125 GIRLYSIYKPGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
G+ L ++ P + I +L F IY+ ++ LI D + TLV L + Y + S Y
Sbjct: 149 GMVLNAVSGPDTRIKPSKLKFKIYAGDGPEDNDRGLIMDNIEPNTLVSLNSGTYHVVSQY 208
Query: 182 GKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGE 241
G+ NA+V +KVE GKI + T+Q+RAA++ FKLVSE GGEA+ADTAWSILT+SGD V E
Sbjct: 209 GEVNALVRADIKVEAGKITEATLQHRAAQMNFKLVSEPGGEAIADTAWSILTSSGDAVAE 268
Query: 242 SANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMR--QKRMDKNGQHNT 298
S +A P +VLSEG+YT IARNK+R Y +EF V G + VE+L++ Q+ + + ++T
Sbjct: 269 SVSAYPVLVLSEGNYTAIARNKDRIYQKEFQVKAGVNADVELLLKDSQQNVQQQAGYDT 327
>gi|222086048|ref|YP_002544580.1| hypothetical protein Arad_2470 [Agrobacterium radiobacter K84]
gi|221723496|gb|ACM26652.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 376
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 121/287 (42%), Positives = 177/287 (61%), Gaps = 6/287 (2%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDA-QRITCEARLTENSTSIDSGVSWHIFDS 63
++ + + + + + LN ++ G V + ++ EA+L +S G+SW++F
Sbjct: 29 AFQEFKQLDGSMKMPKLNAFVAPGGENSPVRTLRDVSLEAKLAPDSGPQQQGLSWYVFSP 88
Query: 64 ISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA 123
+ L GG SF L PGDY ++ SFG GV KK+TV +QKQ +L+A
Sbjct: 89 FAGADGKLPLVASSKGGSASFHLLPGDYFVNVSFGRAGVTKKLTVPESGMSQKQTMVLDA 148
Query: 124 GGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGTNNYQITSH 180
GG+ L ++ I EL+FSIY+ + + L+ V+ TLV L T Y I S
Sbjct: 149 GGMVLNAVSGSDVRIPPAELSFSIYAGDAKEDGERGLVMSDVKPNTLVGLSTGTYHIVSE 208
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YG NA++ ++VE GK+ + TIQ+RAAKITFKLVS+ GGEA+ADTAWSILT++GD VG
Sbjct: 209 YGAVNAVIRADIQVEAGKVTEATIQHRAAKITFKLVSDAGGEAIADTAWSILTSAGDIVG 268
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
ES +A P MVL+EG YT +ARNK++ Y R+F+V+ G++T VEVLM++
Sbjct: 269 ESLSAFPVMVLAEGQYTAVARNKDKIYQRDFTVVAGRNTDVEVLMKE 315
>gi|239831911|ref|ZP_04680240.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824178|gb|EEQ95746.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 393
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 110/273 (40%), Positives = 162/273 (59%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
LNN S + + + + +ARL+E+ I +G+ W +F L
Sbjct: 114 PTLNNYASPSSPENNPLAQTRELDLKARLSEDGGDIPAGLVWRVFSPDVGADGQLPLIAS 173
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG F+L G YL+ ++G G K+ITV + ++ +V +L+AGG++L +I G
Sbjct: 174 AQGGGAVFNLPEGSYLVHVAYGRAGATKRITVGNATRH--EVMMLDAGGMKLSAILPDGG 231
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I +D L FSIY++ N LI V+ T++RL + Y + S+YG NAI+ ++VE
Sbjct: 232 KINNDLLRFSIYADEDNSDRSLIVPDVKPNTIIRLNSGTYHVVSNYGSANAIIRADIRVE 291
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV E GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 292 AGKLTEATVQHRAAEVTLKLVRERGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 351
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEV+ +
Sbjct: 352 YVAVAKNKDRIYQRDFKVSSGKNEEVEVVANGE 384
Score = 41.1 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 64/190 (33%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + ++DA + A L + + + + I+ N +L
Sbjct: 198 GATKRITVGNATRHEVMMLDAGGMKLSAILPDGGKINNDLLRFSIYADEDNSDRSL--IV 255
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L + +
Sbjct: 256 PDVKPNTIIRLNSGTYHVVSNYGSANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRER 315
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 316 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 369
Query: 195 EPGKIIDVTI 204
GK +V +
Sbjct: 370 SSGKNEEVEV 379
>gi|227821827|ref|YP_002825797.1| hypothetical protein NGR_c12630 [Sinorhizobium fredii NGR234]
gi|227340826|gb|ACP25044.1| hypothetical protein NGR_c12630 [Sinorhizobium fredii NGR234]
Length = 333
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 115/295 (38%), Positives = 173/295 (58%), Gaps = 15/295 (5%)
Query: 2 TISFSSYA------KAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSG 55
T +F S+ K + + + L+++ G+ K + EA LT + ++SG
Sbjct: 31 TDAFKSFPSISGSRKMPKLTSFNPLVSDPTQNGELKD------VKLEALLTADGQPVESG 84
Query: 56 VSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQ 115
++W +F I L GG +F+L PG+Y ++ +FG +KI V +
Sbjct: 85 LTWRVFSPIPGGDGKLPLLATSEGGSTAFNLVPGEYFVNVAFGRAAATRKIRVPEQGALD 144
Query: 116 KQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGT 172
KQ+ +L+AGG+ L ++ I EL+FSI+S+ + + LI V+ T+VRLG
Sbjct: 145 KQILVLDAGGVMLNAVSGSDVRIPPTELSFSIFSSDEKEDGERALIVADVKPSTVVRLGA 204
Query: 173 NNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSIL 232
Y + S YG NA++ ++VE GK+ + TIQ+RAAK+T KLVSE GGEA+ADTAWSIL
Sbjct: 205 GTYHVVSDYGSVNAVIRADIQVEAGKLTEATIQHRAAKLTLKLVSEAGGEAIADTAWSIL 264
Query: 233 TASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
T+SGD V ES A P++VL+EG YT +ARNK++ Y R+F+V G +T VEVL+
Sbjct: 265 TSSGDVVSESVGAFPTLVLAEGSYTAVARNKDKIYQRDFAVKAGVNTDVEVLLNG 319
>gi|15889048|ref|NP_354729.1| hypothetical protein Atu1745 [Agrobacterium tumefaciens str. C58]
gi|15156845|gb|AAK87514.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 326
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 114/291 (39%), Positives = 166/291 (57%), Gaps = 6/291 (2%)
Query: 4 SFSSYAKAENMHTTSTL--LNNNISKGKGKRVVD-AQRITCEARLTENSTSIDSGVSWHI 60
S ++ + + T + LN + A+ I EA+LT ++ G+SW +
Sbjct: 26 SQDAFKDFKQLGGTPKMPKLNAFTAPSAPNAPTSTARDIAMEAKLTSEGEAVKEGLSWRV 85
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
F I L GG F L PG+Y ++ +FG GV KK+ V + QKQV I
Sbjct: 86 FSPIPGTDGKLPMLASSEGGSAQFHLVPGEYFVNVAFGRAGVTKKLNVPASGNVQKQVLI 145
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLITDKVRSGTLVRLGTNNYQI 177
L+AGG L +I I ++L FS+YS P+ + L+ ++ T+VRL Y +
Sbjct: 146 LDAGGFVLNAIAGSDKQISGNQLKFSVYSSDARPDGERGLVMADIKPNTIVRLNAGTYHV 205
Query: 178 TSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGD 237
S YG NA+V ++VE GK+ + T+Q++AA+IT KLVSE GGEA+ADTAWS+L GD
Sbjct: 206 VSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQITLKLVSEQGGEAIADTAWSVLNGGGD 265
Query: 238 TVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
V ES +A +MVL+EG+YT IARNK++ Y R F V +G+ + VEVLM+ +
Sbjct: 266 VVNESVSAFSTMVLAEGEYTAIARNKDKVYQRNFKVTSGRDSDVEVLMKDQ 316
>gi|163868517|ref|YP_001609726.1| hypothetical protein Btr_1369 [Bartonella tribocorum CIP 105476]
gi|161018173|emb|CAK01731.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 327
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 99/287 (34%), Positives = 156/287 (54%), Gaps = 7/287 (2%)
Query: 11 AENMHTTSTLLNNNISKGKGKR---VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNK 67
E + + I K K + + ++ ARLT + I+ G+ W ++ I
Sbjct: 37 EEEVDQQQGQSRSFIIKSKEQEKENLASQAQLILNARLTNSRQDIEKGLVWRVYAPILGI 96
Query: 68 KNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIR 127
N L GG FDL PG YL+ SFGH+ V+ + + + + K F AGG+
Sbjct: 97 DNKLPLVATYKGGSARFDLEPGSYLVHVSFGHMSAVRHVRLENGQSLVK-TFHFEAGGLI 155
Query: 128 LYSIYKPGSPIVDDELTFSIYSN--PNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYN 185
L + GS I + EL F+IY + N +I V+ ++VRL Y + SHYG N
Sbjct: 156 LNATLSNGS-INEKELRFTIYEDEKENDDTGVILSNVKPQSVVRLKAGRYHVASHYGSIN 214
Query: 186 AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANA 245
A + ++VE GK+ +VT++++AA+I KLV + GGEA+ADT+WS+ SGD V E+ A
Sbjct: 215 ATARSDIQVEAGKMTEVTLEHQAAQIVLKLVRQEGGEALADTSWSLANDSGDIVYETVGA 274
Query: 246 SPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
S+VL+EG+Y IA+NK++ Y + FSV++G + V+ ++ M +
Sbjct: 275 YVSLVLAEGEYIAIAKNKDKIYQKVFSVVSGHDEDISVVANEQNMQR 321
>gi|325293127|ref|YP_004278991.1| hypothetical protein AGROH133_06703 [Agrobacterium sp. H13-3]
gi|325060980|gb|ADY64671.1| hypothetical protein AGROH133_06703 [Agrobacterium sp. H13-3]
Length = 326
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 114/291 (39%), Positives = 165/291 (56%), Gaps = 6/291 (2%)
Query: 4 SFSSYAKAENMHTTSTL--LNNNISKGKGKRVVD-AQRITCEARLTENSTSIDSGVSWHI 60
S ++ + + T + LN + A+ I EA+LT ++ G+SW +
Sbjct: 26 SQDAFKDFKQLGGTPKMPKLNAFTAPTAPNAPASTARDIDMEAKLTSEGEAVKEGLSWRV 85
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
F I L GG F L PG+Y ++ +FG GV KK+ V S QKQV I
Sbjct: 86 FSPIPGADGKLPMLASSEGGSAQFHLVPGEYFVNVAFGRAGVTKKLNVPSSGNVQKQVLI 145
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLITDKVRSGTLVRLGTNNYQI 177
L+AGG L +I I ++L FS+YS P+ + L+ ++ T+VRL Y +
Sbjct: 146 LDAGGFVLNAIAGSDKQISANQLKFSVYSSDARPDGERGLVMADIKPNTVVRLNAGTYHV 205
Query: 178 TSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGD 237
S YG NA+V ++VE GK+ + T+Q++AA+IT KLVSE GGEA+ADTAWS+L GD
Sbjct: 206 VSEYGNVNAVVRADIQVEAGKLTEATLQHQAAQITLKLVSEQGGEAIADTAWSVLNGGGD 265
Query: 238 TVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
V ES +A +MVL+EG+YT +ARNK++ Y R F V +G+ VEVLM+ +
Sbjct: 266 VVNESVSAFSTMVLAEGEYTAMARNKDKVYQRNFKVTSGRDADVEVLMKDQ 316
>gi|319404150|emb|CBI77743.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 300
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 5/292 (1%)
Query: 3 ISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFD 62
++FS + + L+ + + + ++ A+LT S +I SG+ W ++
Sbjct: 6 VTFSEEGEFQRNQGE-ELVTSIMDSHDHEEGDSYSQLILHAQLTNKSENIMSGLVWRVYA 64
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
I N L GG FDL PG YL+ SFGH VV+++++ ++++ K F L+
Sbjct: 65 PILGSDNKLPLVATYEGGSARFDLKPGSYLVHVSFGHASVVQRVSLENRQQLVKN-FNLD 123
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLGTNNYQITSH 180
AGGI L S G I + EL F+IY + N +I V+ ++VRL +Y++ SH
Sbjct: 124 AGGIILNSTLFNG-IINEKELRFTIYEDERENDDTGVILANVKPQSMVRLKAGHYRVVSH 182
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YG NAI+ + ++VE GKI +VT++++AA+I KLV + GGEA+ADT+WSI SGD +
Sbjct: 183 YGSVNAIIRSDIQVEAGKITEVTLEHQAAQIILKLVRQEGGEALADTSWSITNDSGDIIY 242
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
E+ A +VL EGDY IA+NK++ Y + FSV++G+ V+++ + + +
Sbjct: 243 ETVGAYVLLVLVEGDYIAIAKNKDKIYRKVFSVVSGQDKDVDIIANSQNVQQ 294
>gi|148559273|ref|YP_001259001.1| hypothetical protein BOV_1034 [Brucella ovis ATCC 25840]
gi|225627543|ref|ZP_03785580.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237815490|ref|ZP_04594488.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|148370530|gb|ABQ60509.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|225617548|gb|EEH14593.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237790327|gb|EEP64537.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 352
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 73 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 132
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 133 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 190
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 191 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 250
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 251 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 310
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 311 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 343
Score = 44.9 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 157 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 214
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 215 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 274
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 275 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 328
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 329 ESGKNEDVEV 338
>gi|49475740|ref|YP_033781.1| hypothetical protein BH09950 [Bartonella henselae str. Houston-1]
gi|49238547|emb|CAF27787.1| hypothetical protein BH09950 [Bartonella henselae str. Houston-1]
Length = 339
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 96/294 (32%), Positives = 165/294 (56%), Gaps = 9/294 (3%)
Query: 4 SFSSYAKAENMHTTSTLLNNNISK---GKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
+FS + + + ISK + + ++ ++ ARLT ++ +I G+ W +
Sbjct: 44 AFSQEEGEQERKQEQSR--SFISKSQNNEKENLISQTQLILHARLTNSNENIVKGLVWRV 101
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
+ I N L GG FDL PG YL+ SFGH V+ I++ + + Q F
Sbjct: 102 YAPILGVDNKLPLITTYEGGSARFDLEPGSYLVHVSFGHASAVRHISLENGKSLV-QNFN 160
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLGTNNYQIT 178
L+AG + L + G + + EL F++Y + N ++ ++ ++VRL Y +
Sbjct: 161 LDAGAVTLNATLLNG-IVNEKELRFTLYEDEKENDDTGVVLSNIKPHSIVRLKAGRYHVA 219
Query: 179 SHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT 238
SHYG NA+V + ++V+ GKI +V+++++AA+I KLV + GGEA+ADT+WSI SGD
Sbjct: 220 SHYGSINAVVHSDIQVDAGKITEVSLEHQAAQIVLKLVRQEGGEALADTSWSITNNSGDI 279
Query: 239 VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
+ E+ A S+VL+EG+Y IA+NK++ Y + FSV++G+ + V+ + + M +
Sbjct: 280 MYETVGAYVSLVLAEGEYIAIAKNKDQIYQKVFSVVSGRDEDINVVAKAQNMQQ 333
>gi|294852344|ref|ZP_06793017.1| hypothetical protein BAZG_01266 [Brucella sp. NVSL 07-0026]
gi|294820933|gb|EFG37932.1| hypothetical protein BAZG_01266 [Brucella sp. NVSL 07-0026]
Length = 352
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 73 PTINPYASPASPENNPLVRIYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 132
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 133 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 190
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 191 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 250
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 251 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 310
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 311 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 343
Score = 44.9 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 157 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 214
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 215 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 274
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 275 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 328
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 329 ESGKNEDVEV 338
>gi|161619020|ref|YP_001592907.1| hypothetical protein BCAN_A1085 [Brucella canis ATCC 23365]
gi|260566394|ref|ZP_05836864.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161335831|gb|ABX62136.1| Hypothetical protein BCAN_A1085 [Brucella canis ATCC 23365]
gi|260155912|gb|EEW90992.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 336
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 57 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 116
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 117 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 174
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 175 KIKDDLLRFSIYADEKNSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 234
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 235 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 294
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 295 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 327
Score = 44.1 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 141 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEKNSDRSL--IV 198
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 199 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 258
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 259 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 312
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 313 ESGKNEDVEV 322
>gi|319407168|emb|CBI80807.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 300
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 105/294 (35%), Positives = 169/294 (57%), Gaps = 5/294 (1%)
Query: 1 MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
+ ++FS + + L + + ++ ++ A+LT S +I SG+ W +
Sbjct: 4 INVAFSEEGEFQRNQGE-ELATSIMDSHDHEKDNSYSQLVLNAQLTNKSENIMSGLVWRV 62
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
+ I N L GG FDL PG YL+ SFGH VV+++++ +++ K F
Sbjct: 63 YAPILGSDNKLPLVATYEGGSARFDLKPGSYLVHVSFGHASVVQRVSLENRQHLVKN-FN 121
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLGTNNYQIT 178
L+AGGI L SI G+ I + EL F+IY + N +I V+ ++VRL +Y++
Sbjct: 122 LDAGGIILNSILFNGT-INEKELRFTIYEDERENDDTGVILANVKPQSMVRLKAGHYRVV 180
Query: 179 SHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT 238
SHYG NAI+ + ++VE GKI +VT++++AA+I KLV + GGEA+ADT+WSI SGD
Sbjct: 181 SHYGSVNAIIRSDIQVEAGKITEVTLEHQAAQIILKLVRQEGGEALADTSWSITNDSGDI 240
Query: 239 VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
+ E+ A +VL EGDY IA+NK++ Y + FSV++G+ V V+ + + +
Sbjct: 241 IYETVGAYVLLVLVEGDYIAIAKNKDKIYRKVFSVVSGQDKDVNVIANSQNIQQ 294
>gi|254719142|ref|ZP_05180953.1| hypothetical protein Bru83_06315 [Brucella sp. 83/13]
gi|306838427|ref|ZP_07471272.1| Hypothetical protein BROD_1242 [Brucella sp. NF 2653]
gi|306406567|gb|EFM62801.1| Hypothetical protein BROD_1242 [Brucella sp. NF 2653]
Length = 336
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 57 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 116
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ +V IL+AGG++L ++
Sbjct: 117 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EVMILDAGGMKLSAVLPGNG 174
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NA++ ++VE
Sbjct: 175 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVE 234
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 235 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 294
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 295 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 327
Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 141 GATKRITLSNSARHEVMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 198
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G V + + K + A + L +
Sbjct: 199 PDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 258
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 259 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 312
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 313 ESGKNEDVEV 322
>gi|240850749|ref|YP_002972149.1| hypothetical protein Bgr_12180 [Bartonella grahamii as4aup]
gi|240267872|gb|ACS51460.1| hypothetical protein Bgr_12180 [Bartonella grahamii as4aup]
Length = 329
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 98/292 (33%), Positives = 158/292 (54%), Gaps = 5/292 (1%)
Query: 4 SFSSYAKAE-NMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFD 62
+FS + + S + + + V ++ ARLT + I+ G+ W ++
Sbjct: 34 AFSEEGEGKDQQQGQSRSFIVKSQEQEKENVASQTQLILNARLTNSHPDIEKGLVWRVYA 93
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
I N L GG FDL PG YL+ SFGH+ V+ I + + + K F L
Sbjct: 94 PILGIDNKLPLVATYKGGSARFDLEPGSYLVHVSFGHMSAVRHIRLKNGQSLVKN-FNLE 152
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLGTNNYQITSH 180
AGG+ L + G + + EL F+IY + N +I V+ ++VRL Y + SH
Sbjct: 153 AGGVILNATLLNGV-MNEKELRFTIYEDEKENDDTGVILSNVKPQSVVRLKAGRYHVASH 211
Query: 181 YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG 240
YG NA + ++V+ GK+ +VT++++AA+I KLV + GGEA+ADT+WS+ SGD V
Sbjct: 212 YGSINATARSDIQVDAGKMTEVTLEHQAAQIVLKLVRQEGGEALADTSWSLANDSGDIVY 271
Query: 241 ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
E+ A S+VL+EG+Y IA+NK++ Y + FSV++G + V+ ++ M +
Sbjct: 272 ETVGAYVSLVLAEGEYIAIAKNKDKIYQKVFSVVSGHDEDISVVANEQNMQR 323
>gi|254704360|ref|ZP_05166188.1| hypothetical protein Bsuib36_10616 [Brucella suis bv. 3 str. 686]
Length = 336
Score = 367 bits (943), Expect = e-100, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 57 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 116
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 117 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 174
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 175 KIKDDLLRFSIYADEKNSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 234
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 235 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 294
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 295 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 327
Score = 44.1 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 141 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEKNSDRSL--IV 198
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 199 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 258
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 259 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 312
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 313 ESGKNEDVEV 322
>gi|326409091|gb|ADZ66156.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538796|gb|ADZ87011.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 342
Score = 367 bits (943), Expect = e-100, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 63 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 122
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 123 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 180
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 181 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 240
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 241 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 300
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 301 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 333
Score = 44.5 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 147 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 204
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 205 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 264
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 265 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 318
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 319 ESGKNEDVEV 328
>gi|189024228|ref|YP_001934996.1| hypothetical protein BAbS19_I10130 [Brucella abortus S19]
gi|225852572|ref|YP_002732805.1| hypothetical protein BMEA_A1111 [Brucella melitensis ATCC 23457]
gi|254689294|ref|ZP_05152548.1| hypothetical protein Babob68_03806 [Brucella abortus bv. 6 str.
870]
gi|254693778|ref|ZP_05155606.1| hypothetical protein Babob3T_03799 [Brucella abortus bv. 3 str.
Tulya]
gi|254697430|ref|ZP_05159258.1| hypothetical protein Babob28_06935 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701817|ref|ZP_05163645.1| hypothetical protein Bsuib55_13298 [Brucella suis bv. 5 str. 513]
gi|254706743|ref|ZP_05168571.1| hypothetical protein BpinM_07071 [Brucella pinnipedialis
M163/99/10]
gi|254710150|ref|ZP_05171961.1| hypothetical protein BpinB_07741 [Brucella pinnipedialis B2/94]
gi|254714149|ref|ZP_05175960.1| hypothetical protein BcetM6_12510 [Brucella ceti M644/93/1]
gi|254716793|ref|ZP_05178604.1| hypothetical protein BcetM_10275 [Brucella ceti M13/05/1]
gi|256031645|ref|ZP_05445259.1| hypothetical protein BpinM2_13518 [Brucella pinnipedialis
M292/94/1]
gi|256044730|ref|ZP_05447634.1| hypothetical protein Bmelb1R_09558 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256159789|ref|ZP_05457532.1| hypothetical protein BcetM4_12493 [Brucella ceti M490/95/1]
gi|256255047|ref|ZP_05460583.1| hypothetical protein BcetB_12290 [Brucella ceti B1/94]
gi|256257544|ref|ZP_05463080.1| hypothetical protein Babob9C_09393 [Brucella abortus bv. 9 str.
C68]
gi|256263937|ref|ZP_05466469.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260168775|ref|ZP_05755586.1| hypothetical protein BruF5_10483 [Brucella sp. F5/99]
gi|260545264|ref|ZP_05821005.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260564072|ref|ZP_05834558.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261758256|ref|ZP_06001965.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|297248386|ref|ZP_06932104.1| hypothetical protein BAYG_01339 [Brucella abortus bv. 5 str. B3196]
gi|189019800|gb|ACD72522.1| hypothetical protein BAbS19_I10130 [Brucella abortus S19]
gi|225640937|gb|ACO00851.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|260096671|gb|EEW80546.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260154088|gb|EEW89180.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261738240|gb|EEY26236.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|263094081|gb|EEZ18003.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297175555|gb|EFH34902.1| hypothetical protein BAYG_01339 [Brucella abortus bv. 5 str. B3196]
Length = 336
Score = 367 bits (943), Expect = e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 57 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 116
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 117 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 174
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 175 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 234
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 235 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 294
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 295 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 327
Score = 44.5 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 141 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 198
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 199 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 258
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 259 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 312
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 313 ESGKNEDVEV 322
>gi|256061155|ref|ZP_05451309.1| hypothetical protein Bneo5_12447 [Brucella neotomae 5K33]
Length = 336
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 160/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 57 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 116
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 117 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 174
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 175 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 234
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 235 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 294
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F+V +GK+ VEVL
Sbjct: 295 YVAVAKNKDRIYQRDFTVESGKNEDVEVLANSD 327
Score = 44.5 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 64/190 (33%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 141 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 198
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 199 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 258
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I V
Sbjct: 259 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFTV 312
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 313 ESGKNEDVEV 322
>gi|306841797|ref|ZP_07474482.1| Hypothetical protein BIBO2_1579 [Brucella sp. BO2]
gi|306288127|gb|EFM59517.1| Hypothetical protein BIBO2_1579 [Brucella sp. BO2]
Length = 352
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 106/273 (38%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 73 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 132
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 133 SKGGSTSFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 190
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NA++ ++VE
Sbjct: 191 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVE 250
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 251 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 310
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 311 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 343
Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 157 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 214
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G V + + K + A + L +
Sbjct: 215 PDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 274
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 275 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 328
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 329 ESGKNEDVEV 338
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 71/261 (27%), Gaps = 36/261 (13%)
Query: 46 TENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGK------VSFDLFPGDYLISASFGH 99
++ + GV W + + G +L
Sbjct: 26 SKPGKRLRDGVVWRAVAATLVASPAFAQGVDPTAGTGLSLPEPKLNLP------------ 73
Query: 100 VGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYK-PGSPIVDDEL--TFSIYSNPNHKAL 156
+ + +N V + L + G I + FS P+ +
Sbjct: 74 --TINPYASPASPENNPLVRTYE---LDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLP 128
Query: 157 LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLV 216
LI T L +Y + YG+ A + + ++ I A + V
Sbjct: 129 LIASSKGGSTSFNLPEGSYLVHVAYGRAGATKR--ITLSNSARHEIMIL-DAGGMKLSAV 185
Query: 217 SEMGGEAVAD-TAWSIL----TASGDTVGESANASPSMVLSEGDYTVIARNK--ERNYSR 269
G+ D +SI + + + + L+ G Y V++
Sbjct: 186 LPGNGKIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRA 245
Query: 270 EFSVLTGKSTIVEVLMRQKRM 290
+ V GK T V R +
Sbjct: 246 DIRVEAGKLTEATVQHRAAEV 266
>gi|319783885|ref|YP_004143361.1| hypothetical protein Mesci_4200 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169773|gb|ADV13311.1| hypothetical protein Mesci_4200 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 320
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 110/290 (37%), Positives = 165/290 (56%), Gaps = 12/290 (4%)
Query: 7 SYAKAENMHTTSTLLNNNIS-----KGKGKRVVDAQ-RITCEARLTENSTSIDSGVSWHI 60
S+A A+N+ S L IS KG+ + IT A+LT+ + I G+ W +
Sbjct: 23 SFAMAQNVDGVSDLKLPGISSYATPKGETSLALSGGGAITLSAQLTDKGSDITRGIVWRV 82
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
F + L GG F L PG YL+ AS+G G K+ITV K ++ +
Sbjct: 83 FKPEA-VNGKLPMVASSHGGTAVFQLEPGSYLVHASYGRAGATKRITVGKDAK--RESLV 139
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGTNNYQI 177
L+AGG++L ++ G I +L FSIY N LI V ++VRL Y +
Sbjct: 140 LDAGGLKLDAVLSGGVRIPPKKLRFSIYEGTAEANGDRALIIPDVEPNSVVRLNAGIYHV 199
Query: 178 TSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGD 237
S YG NA++ + ++VE GK+ + T+++ AA+IT KLV E GGEA+ADT+WS+L SGD
Sbjct: 200 VSTYGAVNAVIRSDIRVEAGKLTEATVEHHAAEITMKLVRETGGEAIADTSWSLLNESGD 259
Query: 238 TVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
+ E+ A SMVL+EGDYT+IA+N++R Y ++F+V+ G++ +EVL +
Sbjct: 260 PIKETVGAFASMVLAEGDYTIIAKNRDRIYQKDFTVVAGQNQEIEVLATE 309
>gi|256369495|ref|YP_003107003.1| hypothetical protein BMI_I1075 [Brucella microti CCM 4915]
gi|255999655|gb|ACU48054.1| hypothetical protein BMI_I1075 [Brucella microti CCM 4915]
Length = 330
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 108/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S K +V + +A+LT+ I +G+ W +F L
Sbjct: 51 PTINPYASPASPKNNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 110
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 111 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 168
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 169 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 228
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 229 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 288
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 289 YVAVAKNKDRIYQRDFKVKSGKNEDVEVLANSD 321
Score = 43.0 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 135 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 192
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 193 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 252
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 253 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 306
Query: 195 EPGKIIDVTI 204
+ GK DV +
Sbjct: 307 KSGKNEDVEV 316
>gi|306843942|ref|ZP_07476537.1| Hypothetical protein BIBO1_0605 [Brucella sp. BO1]
gi|306275697|gb|EFM57421.1| Hypothetical protein BIBO1_0605 [Brucella sp. BO1]
Length = 336
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 57 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 116
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ +V IL+AGG++L ++
Sbjct: 117 SKGGSTSFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EVMILDAGGMKLSAVLPGNG 174
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NA++ ++VE
Sbjct: 175 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVE 234
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 235 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 294
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 295 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 327
Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 141 GATKRITLSNSARHEVMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 198
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G V + + K + A + L +
Sbjct: 199 PDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 258
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 259 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 312
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 313 ESGKNEDVEV 322
Score = 38.7 bits (89), Expect = 0.92, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 71/261 (27%), Gaps = 36/261 (13%)
Query: 46 TENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGK------VSFDLFPGDYLISASFGH 99
++ + GV W + + G +L
Sbjct: 10 SKPGKRLRDGVVWRAVAATLVASPAFAQGVDPNAGTGLSLPEPKLNLP------------ 57
Query: 100 VGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYK-PGSPIVDDEL--TFSIYSNPNHKAL 156
+ + +N V + L + G I + FS P+ +
Sbjct: 58 --TINPYASPASPENNPLVRTYE---LDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLP 112
Query: 157 LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLV 216
LI T L +Y + YG+ A + + +V I A + V
Sbjct: 113 LIASSKGGSTSFNLPEGSYLVHVAYGRAGATKR--ITLSNSARHEVMIL-DAGGMKLSAV 169
Query: 217 SEMGGEAVAD-TAWSIL----TASGDTVGESANASPSMVLSEGDYTVIARNK--ERNYSR 269
G+ D +SI + + + + L+ G Y V++
Sbjct: 170 LPGNGKIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRA 229
Query: 270 EFSVLTGKSTIVEVLMRQKRM 290
+ V GK T V R +
Sbjct: 230 DIRVEAGKLTEATVQHRAAEV 250
>gi|163843336|ref|YP_001627740.1| hypothetical protein BSUIS_A1114 [Brucella suis ATCC 23445]
gi|163674059|gb|ABY38170.1| Hypothetical protein BSUIS_A1114 [Brucella suis ATCC 23445]
Length = 336
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 106/273 (38%), Positives = 158/273 (57%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 57 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 116
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 117 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 174
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I D L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 175 KINDYLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 234
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 235 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 294
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 295 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 327
Score = 42.6 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 141 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKINDYLLRFSIYADEENSDRSL--IV 198
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 199 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 258
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 259 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 312
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 313 ESGKNEDVEV 322
>gi|23501948|ref|NP_698075.1| hypothetical protein BR1070 [Brucella suis 1330]
gi|23347894|gb|AAN29990.1| conserved hypothetical protein [Brucella suis 1330]
Length = 330
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 51 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 110
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 111 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 168
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 169 KIKDDLLRFSIYADEKNSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 228
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 229 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 288
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 289 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 321
Score = 43.8 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 135 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEKNSDRSL--IV 192
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 193 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 252
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 253 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 306
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 307 ESGKNEDVEV 316
>gi|62289986|ref|YP_221779.1| hypothetical protein BruAb1_1075 [Brucella abortus bv. 1 str.
9-941]
gi|82699914|ref|YP_414488.1| hypothetical protein BAB1_1092 [Brucella melitensis biovar Abortus
2308]
gi|256113620|ref|ZP_05454440.1| hypothetical protein Bmelb3E_12727 [Brucella melitensis bv. 3 str.
Ether]
gi|62196118|gb|AAX74418.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616015|emb|CAJ11048.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
Length = 330
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 51 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 110
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 111 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 168
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 169 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 228
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 229 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 288
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 289 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 321
Score = 44.1 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 135 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 192
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 193 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 252
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 253 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 306
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 307 ESGKNEDVEV 316
>gi|153009483|ref|YP_001370698.1| hypothetical protein Oant_2153 [Ochrobactrum anthropi ATCC 49188]
gi|151561371|gb|ABS14869.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 345
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 108/273 (39%), Positives = 160/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
LN + + +V + + +ARL+E I +G+ W +F L
Sbjct: 66 PTLNTYAAPSSPENNPLVQTRELDLKARLSEGGGDIPAGLVWRVFSPDVGADGQLPLIAS 125
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG F+L G YL+ ++G G K+ITV + ++ +V +L+AGG++L +I G
Sbjct: 126 AKGGSAVFNLPEGSYLVHVAYGRAGATKRITVGNATRH--EVMMLDAGGMKLSAILPDGG 183
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N+ LI V+ ++RL + Y + S+YG NA + ++VE
Sbjct: 184 KINDDLLRFSIYADEDNNDRSLIVPDVKPNAIIRLNSGTYHVVSNYGTANATIRADIRVE 243
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV E GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 244 AGKLTEATVQHRAAEVTLKLVRERGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 303
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEV+ +
Sbjct: 304 YVAVAKNKDRIYQRDFKVSSGKNEEVEVVANGE 336
Score = 42.6 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 63/190 (33%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + ++DA + A L + D + + I+ N +L
Sbjct: 150 GATKRITVGNATRHEVMMLDAGGMKLSAILPDGGKINDDLLRFSIYADEDNNDRSL--IV 207
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + K + A + L + +
Sbjct: 208 PDVKPNAIIRLNSGTYHVVSNYGTANATIRADIRVEAGKLTEATVQHRAAEVTLKLVRER 267
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 268 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 321
Query: 195 EPGKIIDVTI 204
GK +V +
Sbjct: 322 SSGKNEEVEV 331
>gi|319408656|emb|CBI82311.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 334
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 109/291 (37%), Positives = 166/291 (57%), Gaps = 5/291 (1%)
Query: 4 SFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDS 63
+FS + +N ++ + S+ + ++T ARLT NS +I G+ W ++
Sbjct: 41 AFSEEKELQNYQQEQSITSITHSENHEQE-HSQAKLTLNARLTRNSENITKGLVWRVYTP 99
Query: 64 ISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA 123
I N L GG F+L G YL+ SFGH +V +I + + ++ K F LNA
Sbjct: 100 ILGIDNKLPLIATFEGGTAHFNLEEGSYLVHVSFGHASMVDQINLKNGQEFVKN-FNLNA 158
Query: 124 GGIRLYSIYKPGSPIVDDELTFSIYSN--PNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
GGI S G+ + + EL F+IY + N +I V+ ++VRL T +Y + SHY
Sbjct: 159 GGIVFNSTLLNGT-VNEKELYFTIYKDAEENDDTGVILSNVKPQSIVRLKTGHYHVVSHY 217
Query: 182 GKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGE 241
G NAI + ++V+ GKII+VT Q++AA+I KLV + GGEA+ADT+WSI SGD V E
Sbjct: 218 GSVNAITRSDIQVDAGKIIEVTFQHQAAQIVLKLVRQEGGEALADTSWSITNESGDIVYE 277
Query: 242 SANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
+ A S+VL+EGDY IA+NK++ Y + FSV++G+ V V+ + + K
Sbjct: 278 AVGAYVSLVLAEGDYIAIAKNKDQIYQKVFSVVSGRDEDVNVIADTQNIQK 328
>gi|265984136|ref|ZP_06096871.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264662728|gb|EEZ32989.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 321
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 42 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 101
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ +V IL+AGG++L ++
Sbjct: 102 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EVMILDAGGMKLSAVLPGNG 159
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NA++ ++VE
Sbjct: 160 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVE 219
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 220 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 279
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 280 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 312
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 126 GATKRITLSNSARHEVMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 183
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G V + + K + A + L +
Sbjct: 184 PDVKPNKIIRLNSGTYHVVSNYGTANAVIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 243
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 244 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 297
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 298 ESGKNEDVEV 307
>gi|13471044|ref|NP_102613.1| hypothetical protein mlr0912 [Mesorhizobium loti MAFF303099]
gi|14021788|dbj|BAB48399.1| mlr0912 [Mesorhizobium loti MAFF303099]
Length = 320
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 109/290 (37%), Positives = 161/290 (55%), Gaps = 12/290 (4%)
Query: 7 SYAKAENMHTTSTLLNNNIS-----KGKGKRVVDAQ-RITCEARLTENSTSIDSGVSWHI 60
S A A+ L IS K + + IT A+LT+ T I G+ W +
Sbjct: 23 SLAVAQQKDGMGDLKLPGISSYATPKSETPLALSGGGAITLSAQLTDKGTDITRGLVWRV 82
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
F + L GG F L PG YL+ AS+G G K+ITV + K ++ +
Sbjct: 83 FKPVP-VNGKLPMVASAHGGSAVFQLEPGSYLVHASYGRAGATKRITVGKEAK--RESLV 139
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGTNNYQI 177
L+AGG++L ++ G I +L FSIY N LI V ++VRL Y +
Sbjct: 140 LDAGGLKLDAVLSGGVRIPPKKLRFSIYEGTAEANGDRALIIPDVEPNSVVRLNAGIYHV 199
Query: 178 TSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGD 237
S YG NA++ + ++VE GK+ + T+++ AA+IT KLV E GGEA+ADT+WS+L SGD
Sbjct: 200 VSTYGAVNAVIRSDIRVEAGKLTEATVEHHAAEITMKLVREAGGEAIADTSWSLLNESGD 259
Query: 238 TVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
+ ES A SMVL+EGDYT+IA+N++R Y ++F+V+ G++ +EVL +
Sbjct: 260 PIKESVGAFASMVLAEGDYTIIAKNRDRIYQKDFAVVAGQNQEIEVLATE 309
>gi|261755032|ref|ZP_05998741.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261744785|gb|EEY32711.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 321
Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 42 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 101
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 102 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 159
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 160 KIKDDLLRFSIYADEKNSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 219
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 220 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 279
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 280 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 312
Score = 43.8 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 126 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEKNSDRSL--IV 183
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 184 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 243
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 244 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 297
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 298 ESGKNEDVEV 307
>gi|17987199|ref|NP_539833.1| hypothetical protein BMEI0916 [Brucella melitensis bv. 1 str. 16M]
gi|260754806|ref|ZP_05867154.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260761851|ref|ZP_05874194.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883824|ref|ZP_05895438.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214057|ref|ZP_05928338.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261218591|ref|ZP_05932872.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261222238|ref|ZP_05936519.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314207|ref|ZP_05953404.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317704|ref|ZP_05956901.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321912|ref|ZP_05961109.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752374|ref|ZP_05996083.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|265988737|ref|ZP_06101294.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991151|ref|ZP_06103708.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994987|ref|ZP_06107544.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998202|ref|ZP_06110759.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|17982869|gb|AAL52097.1| hypothetical protein BMEI0916 [Brucella melitensis bv. 1 str. 16M]
gi|260672283|gb|EEX59104.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674914|gb|EEX61735.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873352|gb|EEX80421.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915664|gb|EEX82525.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260920822|gb|EEX87475.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923680|gb|EEX90248.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294602|gb|EEX98098.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296927|gb|EEY00424.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303233|gb|EEY06730.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261742127|gb|EEY30053.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262552670|gb|EEZ08660.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262766100|gb|EEZ11889.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001935|gb|EEZ14510.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264660934|gb|EEZ31195.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 321
Score = 365 bits (937), Expect = 4e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 42 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 101
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 102 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 159
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 160 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 219
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 220 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 279
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 280 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 312
Score = 44.1 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 126 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 183
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 184 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 243
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 244 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 297
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 298 ESGKNEDVEV 307
>gi|261325161|ref|ZP_05964358.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301141|gb|EEY04638.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 321
Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats.
Identities = 107/273 (39%), Positives = 160/273 (58%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F L
Sbjct: 42 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQLPLIAS 101
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 102 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 159
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 160 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 219
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 220 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 279
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F+V +GK+ VEVL
Sbjct: 280 YVAVAKNKDRIYQRDFTVESGKNEDVEVLANSD 312
Score = 44.1 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 64/190 (33%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 126 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 183
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 184 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 243
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I V
Sbjct: 244 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFTV 297
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 298 ESGKNEDVEV 307
>gi|254730328|ref|ZP_05188906.1| hypothetical protein Babob42_03844 [Brucella abortus bv. 4 str.
292]
Length = 336
Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats.
Identities = 106/273 (38%), Positives = 158/273 (57%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F
Sbjct: 57 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQSPLIAS 116
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 117 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 174
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 175 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 234
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 235 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 294
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 295 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 327
Score = 44.5 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 141 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 198
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 199 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 258
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 259 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 312
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 313 ESGKNEDVEV 322
Score = 39.1 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 71/261 (27%), Gaps = 36/261 (13%)
Query: 46 TENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGK------VSFDLFPGDYLISASFGH 99
++ + GV W + + G +L
Sbjct: 10 SKPGKRLRDGVVWRAVAATLVASPAFAQGVDPTAGTGLSLPEPKLNLP------------ 57
Query: 100 VGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYK-PGSPIVDDEL--TFSIYSNPNHKAL 156
+ + +N V + L + G I + FS P+ ++
Sbjct: 58 --TINPYASPASPENNPLVRTYE---LDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQSP 112
Query: 157 LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLV 216
LI L +Y + YG+ A + + ++ I A + V
Sbjct: 113 LIASSKGGSASFNLPEGSYLVHVAYGRAGATKR--ITLSNSARHEIMIL-DAGGMKLSAV 169
Query: 217 SEMGGEAVAD-TAWSIL----TASGDTVGESANASPSMVLSEGDYTVIARNK--ERNYSR 269
G+ D +SI + + + + L+ G Y V++
Sbjct: 170 LPGNGKIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRA 229
Query: 270 EFSVLTGKSTIVEVLMRQKRM 290
+ V GK T V R +
Sbjct: 230 DIRVEAGKLTEATVQHRAAEV 250
>gi|260758028|ref|ZP_05870376.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260668346|gb|EEX55286.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
Length = 321
Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats.
Identities = 106/273 (38%), Positives = 158/273 (57%), Gaps = 5/273 (1%)
Query: 19 TLLNNNISKGKGKR--VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+N S + +V + +A+LT+ I +G+ W +F
Sbjct: 42 PTINPYASPASPENNPLVRTYELDLKAKLTQEGGDIPAGLVWRVFSPDVGPDGQSPLIAS 101
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG SF+L G YL+ ++G G K+IT+S+ ++ ++ IL+AGG++L ++
Sbjct: 102 SKGGSASFNLPEGSYLVHVAYGRAGATKRITLSNSARH--EIMILDAGGMKLSAVLPGNG 159
Query: 137 PIVDDELTFSIYSNP-NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I DD L FSIY++ N LI V+ ++RL + Y + S+YG NAI+ ++VE
Sbjct: 160 KIKDDLLRFSIYADEENSDRSLIVPDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVE 219
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+Q+RAA++T KLV + GGEA+ADT+WSIL ASGD V ESA A SMVL EGD
Sbjct: 220 AGKLTEATVQHRAAEVTLKLVRDHGGEALADTSWSILNASGDVVRESAGAYSSMVLIEGD 279
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
Y +A+NK+R Y R+F V +GK+ VEVL
Sbjct: 280 YVAVAKNKDRIYQRDFKVESGKNEDVEVLANSD 312
Score = 44.1 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 16 TTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTK 75
+ + + S ++DA + A L N D + + I+ N +L
Sbjct: 126 GATKRITLSNSARHEIMILDAGGMKLSAVLPGNGKIKDDLLRFSIYADEENSDRSL--IV 183
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKP 134
+ L G Y + +++G + + + K + A + L +
Sbjct: 184 PDVKPNKIIRLNSGTYHVVSNYGTANAIIRADIRVEAGKLTEATVQHRAAEVTLKLVRDH 243
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
G + D ++SI + ++ + + + + L +Y + I KV
Sbjct: 244 GGEALADT-SWSILNASGD---VVRESAGAYSSMVLIEGDYVAVAKNKD--RIYQRDFKV 297
Query: 195 EPGKIIDVTI 204
E GK DV +
Sbjct: 298 ESGKNEDVEV 307
>gi|315122760|ref|YP_004063249.1| hypothetical protein CKC_05070 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496162|gb|ADR52761.1| hypothetical protein CKC_05070 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 301
Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats.
Identities = 217/294 (73%), Positives = 253/294 (86%), Gaps = 5/294 (1%)
Query: 4 SFSSYAKAEN---MHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
SF SYAK EN +HTTST N+ +SKGKGK+++ AQ+I C+ARLTENS I+SGVSWH+
Sbjct: 6 SFPSYAKTENPSDIHTTSTSSND-MSKGKGKKIIPAQKIICKARLTENSPFINSGVSWHV 64
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
FD+ NKK+TLST KKIIGG V +LFPGDYL+SASFGHVGVVK+ITV+ ++ +K F+
Sbjct: 65 FDTTLNKKDTLSTIKKIIGGIVYLELFPGDYLVSASFGHVGVVKRITVTPTKQIEKHTFV 124
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRL-GTNNYQITS 179
NAGGIRLYSIYKP SPIVDDELTFSIYSNPN K L+I DKV SGTL+RL G+ NYQITS
Sbjct: 125 FNAGGIRLYSIYKPDSPIVDDELTFSIYSNPNQKPLMIADKVSSGTLIRLLGSTNYQITS 184
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV 239
HYGKYNA+VST+VKVE GK+IDVTIQNRAAK TFKLVSE GGEA+ADTAWSILTA GDTV
Sbjct: 185 HYGKYNAVVSTIVKVESGKVIDVTIQNRAAKTTFKLVSEAGGEAIADTAWSILTAGGDTV 244
Query: 240 GESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKN 293
GES +A PSM+LSEGDY VIARNKER YSREFSV TGK+ ++EV+M+QKR+DK+
Sbjct: 245 GESVHAFPSMILSEGDYVVIARNKERIYSREFSVTTGKNKVIEVIMKQKRVDKS 298
>gi|163760289|ref|ZP_02167372.1| hypothetical protein HPDFL43_08504 [Hoeflea phototrophica DFL-43]
gi|162282688|gb|EDQ32976.1| hypothetical protein HPDFL43_08504 [Hoeflea phototrophica DFL-43]
Length = 249
Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats.
Identities = 103/249 (41%), Positives = 151/249 (60%), Gaps = 3/249 (1%)
Query: 41 CEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHV 100
+A LTE+ +++G++W +F I L GG F+ PGDY I +FG
Sbjct: 1 MQAVLTEDGDPVENGLTWRVFHPIPGADGKLPLLATSEGGSAQFEFEPGDYFIHVAFGRS 60
Query: 101 GVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP---NHKALL 157
GV KK++V + Q +L AGG+ L ++ I +L F+IY + L
Sbjct: 61 GVTKKLSVPAAGPLDTQRLVLEAGGLVLNAVSGVDMRIPVQQLRFNIYKAEEGLDGDQQL 120
Query: 158 ITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVS 217
+ + V +VRL Y I S YG NA++ + ++VEPGK+ + IQ+RAA++T KLVS
Sbjct: 121 VVEDVEPNIIVRLNAGTYHIVSEYGGVNAVIRSDIRVEPGKLTEAVIQHRAAQLTLKLVS 180
Query: 218 EMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGK 277
E GGEA+ADTAWSILT+ GD V ES A P++VL+EG+YT IARNK + Y REF+V+ G+
Sbjct: 181 EAGGEAIADTAWSILTSGGDVVSESVGAFPTIVLAEGEYTAIARNKSQTYQREFTVVAGR 240
Query: 278 STIVEVLMR 286
++ +EVL++
Sbjct: 241 NSDIEVLLK 249
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 62/177 (35%), Gaps = 7/177 (3%)
Query: 29 KGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFP 88
+ V++A + A + + ++I+ + + + + L
Sbjct: 76 TQRLVLEAGGLVLNAVSGVDMRIPVQQLRFNIYKAEEGLDGDQQLVVEDVEPNIIVRLNA 135
Query: 89 GDYLISASFGHVGVVKKITVSSKEKNQKQVFILN-AGGIRLYSIYKPGSPIVDDELTFSI 147
G Y I + +G V V + + + + I + A + L + + G + D +SI
Sbjct: 136 GTYHIVSEYGGVNAVIRSDIRVEPGKLTEAVIQHRAAQLTLKLVSEAGGEAIADT-AWSI 194
Query: 148 YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTI 204
++ ++++ V + + L Y + + V G+ D+ +
Sbjct: 195 LTSGGD---VVSESVGAFPTIVLAEGEYTAIAR--NKSQTYQREFTVVAGRNSDIEV 246
>gi|260463882|ref|ZP_05812078.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259030257|gb|EEW31537.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 320
Score = 355 bits (911), Expect = 5e-96, Method: Composition-based stats.
Identities = 105/288 (36%), Positives = 158/288 (54%), Gaps = 12/288 (4%)
Query: 9 AKAENMHTTSTLLNNNISKGKGKR------VVDAQRITCEARLTENSTSIDSGVSWHIFD 62
A A+ L IS + + IT A+LT+ I G+ W +F
Sbjct: 25 AAAQEKDGVGDLKLPGISSYATPKSETSLALGGGGAITLSAQLTDKGADITRGLVWRVFK 84
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
+ L GG F L PG YL+ AS+G G K+ITV + K ++ +L+
Sbjct: 85 PEA-VNGKLPMVASAHGGNAVFQLEPGSYLVHASYGRAGATKRITVGKEAK--RESLVLD 141
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGTNNYQITS 179
AGG++L ++ G I +L FSIY N LI V ++VRL Y + S
Sbjct: 142 AGGLKLDAVLSGGVRIPPKKLRFSIYEGTAEANGDRALIIPDVEPNSVVRLNAGIYHVVS 201
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV 239
YG NA++ + ++VE GK+ + T+++ AA+IT KLV E GGEA+ADT+WS+L SGD +
Sbjct: 202 TYGAVNAVIRSDIRVEAGKLTEATVEHHAAEITMKLVRESGGEAIADTSWSLLNESGDPI 261
Query: 240 GESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
E+ A SMVL+EGDYT+IA+N++R Y ++F+V+ G++ +EVL +
Sbjct: 262 KETVGAFASMVLAEGDYTIIAKNRDRIYQKDFTVVGGQNQEIEVLATE 309
>gi|121602335|ref|YP_989049.1| hypothetical protein BARBAKC583_0752 [Bartonella bacilliformis
KC583]
gi|120614512|gb|ABM45113.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 320
Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats.
Identities = 104/294 (35%), Positives = 160/294 (54%), Gaps = 8/294 (2%)
Query: 4 SFSSYAKAENM-HTTSTLLNNNI--SKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
S+S+++K E + + L ++I S+ + + + ARL NS +I G+ W I
Sbjct: 24 SYSAFSKEERVKNLQQERLTDSIIHSQNNEEETLSQATLIVHARLMNNSENITKGLVWRI 83
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
+ + L GG FDL G YL+ SFGH V ++++ ++ K F
Sbjct: 84 YAPVLMGD-KLPLIATFEGGSAHFDLEAGSYLVHVSFGHASAVHRVSLEKGQQLVKN-FN 141
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSN--PNHKALLITDKVRSGTLVRLGTNNYQIT 178
L AGG+ L S G I + EL F+IY + +I V+ +LVRL Y +
Sbjct: 142 LEAGGVILNSTVLNG-IINEKELNFTIYEDAKETDDTGVILSNVKPQSLVRLKAGYYHVV 200
Query: 179 SHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT 238
S+YG NAI+S ++V+ GKI +V+++++AA+I KLV + GGEA+ADT+WSI SGD
Sbjct: 201 SYYGSINAIISADIQVDEGKITEVSLEHQAAQILLKLVRQEGGEALADTSWSITNDSGDI 260
Query: 239 VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDK 292
+ E+ A +VL EGDY IA+NK++ Y + FSV++G V V+ M K
Sbjct: 261 IYETVGAYVPLVLVEGDYIAIAKNKDQIYQKVFSVISGYDKDVSVIADTDIMQK 314
>gi|27380660|ref|NP_772189.1| hypothetical protein bll5549 [Bradyrhizobium japonicum USDA 110]
gi|27353825|dbj|BAC50814.1| bll5549 [Bradyrhizobium japonicum USDA 110]
Length = 357
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 93/254 (36%), Positives = 147/254 (57%), Gaps = 6/254 (2%)
Query: 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA 95
++ A+ ++S I SG+ W +F ++ T ++ + L PG+Y++
Sbjct: 107 QGVLSLTAKYGKDSAPITSGLVWRVFADRPDENGTFKLIREDRNATPNIVLPPGNYVVHV 166
Query: 96 SFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN--- 152
+FG V V+ TVS K + ++ F+L AGG+R+ S I ++++F+IY
Sbjct: 167 AFGLVSAVR--TVSLKAETDRESFVLPAGGLRIEGRVGT-SRIPQNQISFAIYKGSQFES 223
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ + V +G +V L Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT
Sbjct: 224 GERASLVPNVAAGDVVLLPEGTYYIISNYGDANSVVRSDIRVQAGKLTDVTITHRAAVIT 283
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLVS+ GGEA+A+TAWS+LT GD + ES A P +VLSEG+Y IA+N+ + Y R F+
Sbjct: 284 LKLVSDRGGEALANTAWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVYERGFN 343
Query: 273 VLTGKSTIVEVLMR 286
V+ G VEV+ R
Sbjct: 344 VVNGVDGEVEVVAR 357
>gi|85715169|ref|ZP_01046153.1| hypothetical protein NB311A_01255 [Nitrobacter sp. Nb-311A]
gi|85698084|gb|EAQ35957.1| hypothetical protein NB311A_01255 [Nitrobacter sp. Nb-311A]
Length = 348
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 6/255 (2%)
Query: 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLIS 94
++ AR ++ I+SG+ W ++ ++ ++ S L PG Y++
Sbjct: 97 PQAVLSLTARYGKDLPVINSGLVWRVYSDRPDQTGAFKLVRENHDATPSIALPPGGYVVH 156
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN-- 152
S G V + +T+ ++ F+L AGG+++ S I ++++FSIY
Sbjct: 157 VSLGLVSAARLVTLKPD--TDRESFVLPAGGLKIEGRVG-ASMIPPNQISFSIYKGSQFE 213
Query: 153 -HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
+ + V G ++ L Y I S+YG N++V + ++V+ GK+ DVTI +RAA I
Sbjct: 214 GTERAPLLPNVSGGDIMLLPEGTYYIVSNYGDANSVVRSDIRVQAGKLTDVTISHRAAVI 273
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLVS+ GGEA+A+TAWS+LT GD + ES A P ++L+EG+Y VIA+N+ + + R F
Sbjct: 274 TLKLVSDKGGEALANTAWSVLTPGGDVIKESIGAFPRVILAEGEYRVIAKNEGKVFERGF 333
Query: 272 SVLTGKSTIVEVLMR 286
V G +EVL R
Sbjct: 334 EVFNGVDGEIEVLAR 348
>gi|92117200|ref|YP_576929.1| hypothetical protein Nham_1651 [Nitrobacter hamburgensis X14]
gi|91800094|gb|ABE62469.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 348
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 7/258 (2%)
Query: 33 VVDAQR-ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDY 91
V AQ ++ AR ++ I+SG+ W ++ ++ ++ GG + L PG Y
Sbjct: 94 VAPAQAVLSLTARFGKDLPVINSGLIWRVYSDRPDETGVFKLMREDHGGTPNIVLPPGSY 153
Query: 92 LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP 151
++ S G V V+ +T+ + F+L AGG+R+ S I ++++FSIY
Sbjct: 154 VVYVSLGLVSAVRPVTLKPDA--DHETFVLPAGGLRIEGRVG-ASMIPPNQISFSIYKGS 210
Query: 152 N---HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRA 208
+ + V +G ++ L Y I S YG N++V + ++V+ K+ DVTI +RA
Sbjct: 211 QFEGTERAPLVPNVTAGDVILLPEGTYYIVSTYGDANSVVRSDIRVQAAKLTDVTISHRA 270
Query: 209 AKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYS 268
A IT KLVS+ GGEA+A+TAWS+LT GD + ES A P ++L+EG+Y VIA+N+ + +
Sbjct: 271 AVITLKLVSDKGGEALANTAWSVLTPGGDVIKESIGAFPRVILAEGEYRVIAKNEGKVFE 330
Query: 269 REFSVLTGKSTIVEVLMR 286
R F V+ G VEV+ R
Sbjct: 331 RGFEVVNGVDGEVEVVAR 348
>gi|75675517|ref|YP_317938.1| hypothetical protein Nwi_1325 [Nitrobacter winogradskyi Nb-255]
gi|74420387|gb|ABA04586.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 349
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 88/251 (35%), Positives = 142/251 (56%), Gaps = 6/251 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
++ AR ++ +I+SG+ W ++ ++ ++ S L PGDY++ S G
Sbjct: 102 LSLTARYGKDLPAINSGLIWRVYSDRPDETGAFKLVREDHEATPSIALPPGDYVVHVSLG 161
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN---HKA 155
V + +T+ S ++ F+L AGG+++ S I ++++FSIY +
Sbjct: 162 LVSAARPVTLRSDA--DRESFVLPAGGLKIEGRVG-ASMIPPNQISFSIYKGSQFEGTER 218
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+ V G ++ L Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT KL
Sbjct: 219 APLLPNVAGGDVMLLPEGTYYIVSNYGDANSVVRSDIRVQAGKLTDVTISHRAAVITLKL 278
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
VS+ GGEA+A+TAWS+LT GD + ES A P +VL+EG+Y VIA+N+ + + R F V
Sbjct: 279 VSDKGGEALANTAWSVLTPGGDVIKESIGAFPRVVLAEGEYRVIAKNEGKVFERGFEVSN 338
Query: 276 GKSTIVEVLMR 286
G +EVL R
Sbjct: 339 GVDGEIEVLAR 349
>gi|146339959|ref|YP_001205007.1| hypothetical protein BRADO2963 [Bradyrhizobium sp. ORS278]
gi|146192765|emb|CAL76770.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 249
Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats.
Identities = 90/251 (35%), Positives = 144/251 (57%), Gaps = 6/251 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
++ AR ++ +I+ G+ W +F ++ T ++ G + L PG+Y++ + G
Sbjct: 2 LSLSARYGKDLPNINGGLVWRVFADRPDETGTFKMLREDRGPTPNIVLPPGNYVVHVALG 61
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKAL-- 156
V V+ TV+ K + ++ F+L AGG+RL + I ++++F+IY
Sbjct: 62 LVSAVR--TVNLKAETDRESFLLPAGGLRLEGRVGS-TKIPQNQISFAIYKGSQFDGRER 118
Query: 157 -LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
I V +G ++ L Y I S+YG NA+V + ++V+ K+ DVT+ +RAA IT KL
Sbjct: 119 APIVPNVAAGDILMLPEGTYYIVSNYGDANAVVRSDIRVQASKLTDVTVTHRAAVITLKL 178
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
VS+ GGEA+A+TAWS++ GD + ES A P +VLSEGDY IA+N+ + + R FSV+
Sbjct: 179 VSDKGGEALANTAWSVINPGGDVIKESVGAFPKVVLSEGDYRAIAKNEGKVFERSFSVVN 238
Query: 276 GKSTIVEVLMR 286
G VEVL R
Sbjct: 239 GVDGEVEVLAR 249
>gi|148256524|ref|YP_001241109.1| hypothetical protein BBta_5211 [Bradyrhizobium sp. BTAi1]
gi|146408697|gb|ABQ37203.1| hypothetical protein BBta_5211 [Bradyrhizobium sp. BTAi1]
Length = 284
Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats.
Identities = 87/254 (34%), Positives = 142/254 (55%), Gaps = 6/254 (2%)
Query: 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA 95
++ AR ++ +I+ G+ W +F ++ ++ G + L PG+Y++
Sbjct: 34 QGVLSLSARYGKDLPNINGGLVWRVFADRPDESGAFKMLREDRGATPNIVLPPGNYVVHV 93
Query: 96 SFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKA 155
+ G V V+ + + K + ++ F+L AGG+RL S I ++++F+IY
Sbjct: 94 ALGLVSAVRAVNL--KAETDRESFVLPAGGLRLEGRVGT-SKIPPNQISFAIYKGSQFDG 150
Query: 156 L---LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
I V +G ++ L Y I S+YG N++V + ++V+ K+ DVT+ +RAA IT
Sbjct: 151 RERAPIVPNVAAGDVLMLPEGTYYIVSNYGDANSVVRSDIRVQASKLTDVTVTHRAAVIT 210
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLVS+ GGEA+A+TAWS++ GD + ES A P +VLSEGDY IA+N+ + + R FS
Sbjct: 211 LKLVSDKGGEALANTAWSVINPGGDVIKESIGAFPKVVLSEGDYRAIAKNEGKVFERSFS 270
Query: 273 VLTGKSTIVEVLMR 286
V+ G VEVL R
Sbjct: 271 VVNGVDGEVEVLAR 284
>gi|39936474|ref|NP_948750.1| hypothetical protein RPA3411 [Rhodopseudomonas palustris CGA009]
gi|39650330|emb|CAE28852.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 387
Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats.
Identities = 88/251 (35%), Positives = 144/251 (57%), Gaps = 6/251 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I+SG+ W ++ ++ + ++ G + L PG+Y++ + G
Sbjct: 140 LALAARYGKDQPVINSGLVWRVYSDKPDESGAIKLVREDHGATPNIPLPPGNYVVHVALG 199
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHK---A 155
V V+ +TV S +++ F+L AGG+R+ S I ++++F+IY
Sbjct: 200 LVSAVRPVTVKSDA--ERENFVLPAGGLRIEGKVGS-SRIPSNQISFTIYKGSQFDNAQR 256
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+ V +G + + Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT KL
Sbjct: 257 APLLPSVAAGDVALVPEGTYYIVSNYGDANSVVRSDIRVQAGKLTDVTITHRAAVITLKL 316
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
VSE GGEA+A+T+WS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+V+
Sbjct: 317 VSEKGGEALANTSWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERGFNVVN 376
Query: 276 GKSTIVEVLMR 286
G VEVL R
Sbjct: 377 GVDGEVEVLAR 387
>gi|110633364|ref|YP_673572.1| hypothetical protein Meso_1010 [Mesorhizobium sp. BNC1]
gi|110284348|gb|ABG62407.1| hypothetical protein Meso_1010 [Chelativorans sp. BNC1]
Length = 316
Score = 346 bits (887), Expect = 3e-93, Method: Composition-based stats.
Identities = 97/274 (35%), Positives = 157/274 (57%), Gaps = 8/274 (2%)
Query: 19 TLLNNNISKGKGKRVV--DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
L + + A ++ A+LT+++ I G++W +F L
Sbjct: 36 PGLTEFAAPQTQSPLAQAKASQVVLAAQLTKDAPEIPGGLTWRVFSPEPGPDGKLPLVAT 95
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
GG +F L PG YL+ A++G G K+ITV+ + K+ + +L+AGG++L ++
Sbjct: 96 AKGGTSAFSLAPGSYLVHAAYGRAGATKRITVAGEAKH--ESLVLDAGGLKLDAVLPGDI 153
Query: 137 PIVDDELTFSIYS---NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK 193
I + +L FSIY + + LI VR +VRL Y + S+YG A++ + ++
Sbjct: 154 RIPEKQLRFSIYEAEPDATGERPLIVPDVRPNAIVRLNAGTYHVVSNYGPI-AVIRSDIR 212
Query: 194 VEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
VE G++ + T+++RAA++T KLV E GGEA+ADTAWSILT +G+ V ++ A S+VL E
Sbjct: 213 VEAGQLTEATVEHRAAEMTLKLVRETGGEAIADTAWSILTETGEIVLDTVGAYASIVLPE 272
Query: 254 GDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
GDYT++A+N+ER Y R+F+V G+ VE+L
Sbjct: 273 GDYTIVAKNRERIYQRDFTVTPGQKQDVELLPED 306
>gi|86749277|ref|YP_485773.1| FHA domain-containing protein [Rhodopseudomonas palustris HaA2]
gi|86572305|gb|ABD06862.1| FHA domain containing protein [Rhodopseudomonas palustris HaA2]
Length = 353
Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats.
Identities = 87/254 (34%), Positives = 144/254 (56%), Gaps = 6/254 (2%)
Query: 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA 95
+ AR ++ +I++G+ W ++ + + ++ G + L PG+Y++
Sbjct: 103 QGVLALTARYGKDLPAINAGLVWRVYSDRPDDSGAIKLIREEHGATPNIVLPPGNYVVHV 162
Query: 96 SFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN---PN 152
+ G V V+ +T+ K ++ FIL AGG+R+ G+ I ++++FSIY N
Sbjct: 163 AHGLVSAVRPVTL--KTDTDREAFILPAGGLRIEGRVG-GTRIPQNQISFSIYKGSQFEN 219
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ + +G + + Y I S+YG N++V + ++V GK+ DVT+ +RAA IT
Sbjct: 220 SQRPPLVPNAAAGDVALVPEGTYYIVSNYGDANSVVRSDIRVTAGKLTDVTVTHRAAVIT 279
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLVS+ GGEA+A+TAWS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+
Sbjct: 280 LKLVSDRGGEALANTAWSVLTPGGDVIKESIGAFPKVVLSEGEYRAIAKNEGKVFERGFN 339
Query: 273 VLTGKSTIVEVLMR 286
V+ G VEVL R
Sbjct: 340 VVNGVDGEVEVLAR 353
>gi|316933332|ref|YP_004108314.1| hypothetical protein Rpdx1_1971 [Rhodopseudomonas palustris DX-1]
gi|315601046|gb|ADU43581.1| hypothetical protein Rpdx1_1971 [Rhodopseudomonas palustris DX-1]
Length = 379
Score = 344 bits (884), Expect = 6e-93, Method: Composition-based stats.
Identities = 89/254 (35%), Positives = 143/254 (56%), Gaps = 6/254 (2%)
Query: 36 AQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA 95
+ AR ++ I+SG+ W ++ + + ++ G S L PG+Y++
Sbjct: 129 QGVLALTARYGKDQPVINSGLIWRVYSDRPDDSGAIKLIREDHGATPSIPLPPGNYVVHV 188
Query: 96 SFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHK- 154
+ G V V+ +TV + +++ F+L AGG+R+ S I ++++FSIY
Sbjct: 189 ALGLVSAVRPVTVKAD--TERENFVLPAGGLRIEGKVGS-SRIPANQISFSIYKGSQFDN 245
Query: 155 --ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ V +G + + Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT
Sbjct: 246 AQRAPLLPGVAAGDVALVPEGTYYIVSNYGDANSVVRSDIRVQTGKLTDVTITHRAAVIT 305
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLVSE GGEA+A+T+WS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+
Sbjct: 306 LKLVSEKGGEALANTSWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERGFN 365
Query: 273 VLTGKSTIVEVLMR 286
V+ G VEVL R
Sbjct: 366 VVNGVDGEVEVLAR 379
>gi|115524342|ref|YP_781253.1| hypothetical protein RPE_2333 [Rhodopseudomonas palustris BisA53]
gi|115518289|gb|ABJ06273.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 357
Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats.
Identities = 86/255 (33%), Positives = 138/255 (54%), Gaps = 6/255 (2%)
Query: 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLIS 94
+ AR ++ I+ G+ W ++ ++ ++ + L PG Y++
Sbjct: 106 PQAVLALSARYGKDLPVINGGLVWRVYSDRPDETGAFKLIREDRNATPNMVLPPGSYVVH 165
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN-- 152
+ G V V+ +T+ K ++ F+L AGG+R+ S I ++++FSIY
Sbjct: 166 VAHGLVSAVRPVTI--KSDTDREAFVLPAGGLRIEGRVGT-SKIPQNQISFSIYKGSQFE 222
Query: 153 -HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
+ + V +G +V L Y I S+YG N++V + ++V+ GK+ DV I +RAA I
Sbjct: 223 TSERAPLVPSVAAGDVVLLPDGTYYIVSNYGDANSVVRSDIRVQAGKLTDVIITHRAAVI 282
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLVSE GGEA+A+TAWS++T GD V ES A P +VLSEG Y IA+N+ + + R F
Sbjct: 283 TLKLVSEKGGEALANTAWSVITPGGDVVKESIGAFPRVVLSEGPYRAIAKNEGKVFERSF 342
Query: 272 SVLTGKSTIVEVLMR 286
V+ G +EV+ R
Sbjct: 343 DVVNGVDGEIEVMSR 357
>gi|319405603|emb|CBI79226.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 246
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 97/241 (40%), Positives = 144/241 (59%), Gaps = 4/241 (1%)
Query: 54 SGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEK 113
SG+ W ++ I N L GG FDL PG YL+ SFGH V++IT+ + ++
Sbjct: 2 SGLVWRVYVPILGSDNKLPLIAIYKGGTARFDLKPGSYLVHVSFGHASAVQRITLENGQQ 61
Query: 114 NQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLG 171
K F L+AGGI S G+ I + EL F+IY + N +I V+ ++VRL
Sbjct: 62 LVKN-FNLDAGGIIFNSTLFNGT-INEKELRFTIYEDEKENDDTGVILANVKPQSIVRLK 119
Query: 172 TNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSI 231
+ +Y++ SHYG NAIV ++VE GKI +VT++++AA+I KLV + GGEA+ADT+WSI
Sbjct: 120 SGHYRVVSHYGSVNAIVRADIQVEAGKITEVTLEHQAAQIILKLVRQEGGEALADTSWSI 179
Query: 232 LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMD 291
SGD + E+ A +VL EGDY IA+NK++ Y + FSV++G V V+ + +
Sbjct: 180 TNDSGDIIYETVGAYVLLVLVEGDYIAIAKNKDKIYQKIFSVVSGHDKDVNVIANSQNIQ 239
Query: 292 K 292
+
Sbjct: 240 Q 240
>gi|192292259|ref|YP_001992864.1| hypothetical protein Rpal_3891 [Rhodopseudomonas palustris TIE-1]
gi|192286008|gb|ACF02389.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 353
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 88/251 (35%), Positives = 144/251 (57%), Gaps = 6/251 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I+SG+ W ++ ++ + ++ G + L PG+Y++ + G
Sbjct: 106 LALAARYGKDQPVINSGLVWRVYSDKPDESGAIKLVREDHGATPNIPLPPGNYVVHVALG 165
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHK---A 155
V V+ +TV S +++ F+L AGG+R+ S I ++++F+IY
Sbjct: 166 LVSAVRPVTVKSDA--ERENFVLPAGGLRIEGKVGS-SRIPSNQISFTIYKGSQFDNAQR 222
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+ V +G + + Y I S+YG N++V + ++V+ GK+ DVTI +RAA IT KL
Sbjct: 223 APLLPSVAAGDVALVPEGTYYIVSNYGDANSVVRSDIRVQAGKLTDVTITHRAAVITLKL 282
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
VSE GGEA+A+T+WS+LT GD + ES A P +VLSEG+Y IA+N+ + + R F+V+
Sbjct: 283 VSEKGGEALANTSWSVLTPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERGFNVVN 342
Query: 276 GKSTIVEVLMR 286
G VEVL R
Sbjct: 343 GVDGEVEVLAR 353
>gi|91977735|ref|YP_570394.1| hypothetical protein RPD_3269 [Rhodopseudomonas palustris BisB5]
gi|91684191|gb|ABE40493.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 351
Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats.
Identities = 83/276 (30%), Positives = 147/276 (53%), Gaps = 9/276 (3%)
Query: 14 MHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLST 73
+ + + + + AR ++ +I +G+ W ++ + +
Sbjct: 82 VSAVTPPATSPLPPTAAP---PQGVLALTARYGKDLPTISNGLVWRVYADKPDDGGQIKL 138
Query: 74 TKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYK 133
++ G + L PG+Y++ + G V V+ + + + + ++ F+L AGG+R+
Sbjct: 139 VREDHGATPNIVLPPGNYVVHVAHGLVSAVRPVAL--RAETDREAFVLPAGGLRIEGRVG 196
Query: 134 PGSPIVDDELTFSIYSN---PNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVST 190
G+ I ++++FSIY N + + +G +V + Y I S+YG N++V +
Sbjct: 197 -GTRIPQNQISFSIYKGSQFENTQRAPLVPNAAAGDVVLVPEGTYYIVSNYGDANSVVRS 255
Query: 191 VVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMV 250
++V GK+ DV + +RAA IT KLVS+ GGEA+A+TAWS+LT GD + ES A P +V
Sbjct: 256 DIRVTAGKLTDVAVTHRAAVITLKLVSDKGGEALANTAWSVLTPGGDVIKESIGAFPRVV 315
Query: 251 LSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMR 286
LSEG+Y IA+N+ + + R F+V+ G VEV+ R
Sbjct: 316 LSEGEYRAIAKNEGKVFERGFNVVNGVDGEVEVMAR 351
>gi|90424617|ref|YP_532987.1| hypothetical protein RPC_3126 [Rhodopseudomonas palustris BisB18]
gi|90106631|gb|ABD88668.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 355
Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats.
Identities = 83/251 (33%), Positives = 140/251 (55%), Gaps = 6/251 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ AR ++ I + + W ++ ++ ++ G + L PG Y++ + G
Sbjct: 108 LALTARYGKDLPVIGNNLIWRVYSDRPDETGAFKLVREDRGATPNIVLPPGSYVVHVAHG 167
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN---HKA 155
V V+ +T+ K + ++ F+L AGG+R+ S I ++++FSIY +
Sbjct: 168 LVSAVRPVTL--KSETDRESFVLPAGGLRIEGRVGS-SKIPQNQISFSIYKGSQFEVGER 224
Query: 156 LLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL 215
+ V +G +V L Y I S+YG N++V + ++V+ GK+ DV I +RAA IT KL
Sbjct: 225 APLLPNVAAGDVVLLQEGTYYIISNYGDANSVVRSDIRVQAGKLTDVIITHRAAVITLKL 284
Query: 216 VSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
V + GGEA+A+TAWS++T GD + ES A P +VLSEG+Y IA+N+ + + R F+V+
Sbjct: 285 VGDKGGEALANTAWSVITPGGDVIKESIGAFPRVVLSEGEYRAIAKNEGKVFERAFNVVN 344
Query: 276 GKSTIVEVLMR 286
G +EV+ R
Sbjct: 345 GVDGEIEVIAR 355
>gi|90417789|ref|ZP_01225701.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337461|gb|EAS51112.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 322
Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 147/255 (57%), Gaps = 4/255 (1%)
Query: 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLIS 94
+T +ARLTE+ I +G+ W +F +I + + +F++ G Y++
Sbjct: 57 SRATLTLKARLTEDGEPIPNGLVWRLFSAIPAIDGRATLIASSESSEANFEVPAGSYILH 116
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN-- 152
FG GVVK+I + + ++ LNAGG+RL ++ G I L+F +YS+
Sbjct: 117 VGFGRAGVVKRIDFTGVKT--QETITLNAGGLRLDAMVGDGQTIEPARLSFDVYSDAETE 174
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
LI V ++RL Y I S YG NA V ++VEPGK+ D T+Q+RAA +T
Sbjct: 175 SDRDLIASDVPPNKVLRLNAGTYHIVSSYGSVNASVRADIRVEPGKVTDATLQHRAALLT 234
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV E+GGEA+ADTAWS+ TASGD V ES A PSMVL+ GDY ++ARN ++ Y R F+
Sbjct: 235 MKLVRELGGEAIADTAWSVTTASGDPVRESVGAFPSMVLASGDYVIVARNNDKVYQRAFA 294
Query: 273 VLTGKSTIVEVLMRQ 287
V G++T VEVL
Sbjct: 295 VEPGQNTDVEVLTSD 309
>gi|118591253|ref|ZP_01548652.1| hypothetical protein SIAM614_16542 [Stappia aggregata IAM 12614]
gi|118436329|gb|EAV42971.1| hypothetical protein SIAM614_16542 [Stappia aggregata IAM 12614]
Length = 342
Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats.
Identities = 94/268 (35%), Positives = 142/268 (52%), Gaps = 5/268 (1%)
Query: 31 KRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGD 90
K + + A+LT +S ++ G+ W I+ +N L GG F L PG
Sbjct: 72 KGGLRQGALYLMAKLTPDSPPLNEGLIWRIYSETTNADGRLQLVATSQGGDAEFRLDPGT 131
Query: 91 YLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS- 149
YLI ++G+ +I + ++ Q ++ LNAGGI+ + K G + + F +Y
Sbjct: 132 YLIHTAYGYAQATNRIVIG--KEVQSKMVTLNAGGIKFGAALKDGEDLDGRAVAFDLYGM 189
Query: 150 --NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNR 207
N + LI V+ G+++RLG N Y + S YG NA+V ++V PGK+ + TI ++
Sbjct: 190 EFNQRGERNLIASNVKPGSILRLGANTYHVVSKYGDVNAVVRADIQVLPGKLTEATIFHK 249
Query: 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNY 267
AA IT KLV+E GGEA+A+T WS+L+ GD V E+ A P VL+EG+Y +ARN R Y
Sbjct: 250 AAGITLKLVNERGGEAIANTTWSVLSPGGDVVVEATGAFPDFVLAEGEYEALARNNGRTY 309
Query: 268 SREFSVLTGKSTIVEVLMRQKRMDKNGQ 295
F V G+ VEV+ + Q
Sbjct: 310 LHTFQVQPGEDREVEVVTSVSELASQQQ 337
>gi|254504001|ref|ZP_05116152.1| hypothetical protein SADFL11_4040 [Labrenzia alexandrii DFL-11]
gi|222440072|gb|EEE46751.1| hypothetical protein SADFL11_4040 [Labrenzia alexandrii DFL-11]
Length = 358
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 5/256 (1%)
Query: 32 RVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDY 91
+D + A+LT +S ++ + W I+ +N L GG F L PG Y
Sbjct: 91 EGLDGGALYLMAKLTRDSQPLNDNLIWRIYSETTNADGRLQLIATSKGGDAEFRLDPGAY 150
Query: 92 LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS-- 149
+I S+G+ +I + ++ ++ LNAGGI+ + G+P+ +TF IYS
Sbjct: 151 MIHTSYGYAQATNRIVIG--KEVLSKMVTLNAGGIKFDATLPDGAPLESGPVTFDIYSRE 208
Query: 150 -NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRA 208
+ + LI V+ G+++RL + Y I S YG NA + ++V PGK+ + TI ++A
Sbjct: 209 FDQRGERDLIASSVKPGSIIRLNADTYHIVSRYGDANAEIRADIQVLPGKLTEATIFHKA 268
Query: 209 AKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYS 268
A IT KLV+E GGEA+A+T WS+L+ GD V E+ A P VL+ G+Y +ARN R Y
Sbjct: 269 ADITLKLVNERGGEAIANTTWSVLSPGGDVVVEATGAFPDFVLAAGEYEAVARNNGRTYL 328
Query: 269 REFSVLTGKSTIVEVL 284
F+V G VEV+
Sbjct: 329 HTFTVEPGADREVEVV 344
>gi|299135306|ref|ZP_07028497.1| FHA domain containing protein [Afipia sp. 1NLS2]
gi|298590283|gb|EFI50487.1| FHA domain containing protein [Afipia sp. 1NLS2]
Length = 349
Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats.
Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 7/260 (2%)
Query: 32 RVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDY 91
+ +T AR ++ +I+ G+ W I+ + ++ L PG Y
Sbjct: 92 QATPQGTLTLSARFGKDMPAINGGLIWRIYSDKLGPNGAMHLIREERAAAPVIPLPPGGY 151
Query: 92 LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP 151
+I S G V V+ +T+ +E+ ++ F L AGG+R+ S I ++ FSIY
Sbjct: 152 VIHVSLGLVSDVRPVTIR-QEETTRETFDLAAGGLRIEGRVGT-SKIPQGQIVFSIYKGS 209
Query: 152 N-----HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQN 206
I V +G ++ L Y + S YG N+IV + ++V+ K+ DV + +
Sbjct: 210 QFEIGTGDRSPIAQNVAAGDVLMLPAGIYYLVSTYGDANSIVRSDIRVQAAKLTDVVVTH 269
Query: 207 RAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERN 266
RAA IT KLV E GGEA+A+TAWS+LT +GD + ES A P ++L+EG+Y IA+N +
Sbjct: 270 RAAVITLKLVGEKGGEALANTAWSVLTPAGDVIKESIGAFPRVMLAEGEYKAIAKNDGKV 329
Query: 267 YSREFSVLTGKSTIVEVLMR 286
+ R+F V G VEVL R
Sbjct: 330 FERDFEVKNGVDGEVEVLTR 349
>gi|209884751|ref|YP_002288608.1| FHA domain containing protein [Oligotropha carboxidovorans OM5]
gi|209872947|gb|ACI92743.1| FHA domain containing protein [Oligotropha carboxidovorans OM5]
Length = 353
Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 7/277 (2%)
Query: 15 HTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTT 74
+ L+ + + + AR ++ I+ G+ W I+ + +
Sbjct: 79 DLPAQLVQPPLIPPPSAQAAPQGSLALSARFGKDLPVINGGLVWRIYSDKPSLNGAMQLV 138
Query: 75 KKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKP 134
++ + L PG Y++ AS G V V +TV E ++ F L AGG+R+
Sbjct: 139 REEHAAGPTIPLPPGGYVVHASLGLVSDVHSLTVKQDE-TARETFELPAGGLRIEGRVGT 197
Query: 135 GSPIVDDELTFSIYSNPN-----HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVS 189
S I ++ FS+Y I + +G ++ L Y + S+YG N+IV
Sbjct: 198 -SKIPQGQIVFSVYKGSQFEIGTGDRAPIAQNIPAGDVLMLPAGIYYLVSNYGDANSIVR 256
Query: 190 TVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSM 249
+ ++V+ K+ DV + +RAA IT KLV E GGEA+A+T+WS++T +GD + ES A P +
Sbjct: 257 SDIRVQAAKLTDVVVTHRAAVITLKLVGEKGGEALANTSWSVITPAGDVIKESTGAFPRV 316
Query: 250 VLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMR 286
+L+EG+Y IA+N+ + + R+F V G VEVL+R
Sbjct: 317 MLAEGEYRAIAKNEGKVFERDFEVKNGVDGEVEVLIR 353
>gi|307946208|ref|ZP_07661543.1| FHA domain-containing protein [Roseibium sp. TrichSKD4]
gi|307769872|gb|EFO29098.1| FHA domain-containing protein [Roseibium sp. TrichSKD4]
Length = 363
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 97/266 (36%), Positives = 146/266 (54%), Gaps = 6/266 (2%)
Query: 26 SKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFD 85
S ++ + A+LT ++ + SG++W I+ +N L K GG F
Sbjct: 91 SGSGFPSELNGGVLHLMAKLTRDTAPLTSGLTWRIYSETTNSDGRLELIAKSEGGHAEFQ 150
Query: 86 LFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTF 145
L PG YLI +G+ V +I + K + ++ LNAGG++L + +P+ D + F
Sbjct: 151 LDPGVYLIHTGYGYASAVNRIVMG--RKVESKMVTLNAGGVKLNAGLDQDTPLSTD-VQF 207
Query: 146 SIYS---NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDV 202
+Y N + LI D + G +VRL Y I + YG N++V V+V PGK+ +
Sbjct: 208 DVYGMEFNERGERQLIVDGLSPGDIVRLNAETYHIVNRYGDSNSVVRADVQVLPGKLTEA 267
Query: 203 TIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARN 262
T+ ++AA+IT KLV+E GGEA+A+T+WS+L+ GD V E+ A PS VL+ GDY VIARN
Sbjct: 268 TLFHKAAEITLKLVNEEGGEAIANTSWSVLSPGGDVVVEATGAFPSFVLAAGDYEVIARN 327
Query: 263 KERNYSREFSVLTGKSTIVEVLMRQK 288
R + +F V TG VEVL +
Sbjct: 328 NGRLFQDKFKVQTGGDREVEVLASSR 353
>gi|328543266|ref|YP_004303375.1| hypothetical protein SL003B_1647 [Polymorphum gilvum SL003B-26A1]
gi|326413012|gb|ADZ70075.1| hypothetical protein SL003B_1647 [Polymorphum gilvum SL003B-26A1]
Length = 341
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 98/257 (38%), Positives = 140/257 (54%), Gaps = 5/257 (1%)
Query: 34 VDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLI 93
+D + ARL++ ++ GV W I+ N L +GG F L PG YLI
Sbjct: 83 MDKGALYLVARLSDGGPTLSDGVIWRIYSETPNSNGNLELVATSMGGDAEFRLDPGAYLI 142
Query: 94 SASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS---N 150
++GH G ++ V + +LNAGG+RL + + + F I+ N
Sbjct: 143 HTAYGHAGATNRLVVGRG--VYSKTVVLNAGGVRLDAALGDNRHLGAEVARFDIFGMDYN 200
Query: 151 PNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAK 210
+ LIT V T+VRL Y + S YG NA+V ++VEPGK+ T+ ++AA
Sbjct: 201 EQGERQLITTNVGPETIVRLNAGTYHVVSRYGDVNAVVRADIRVEPGKLTGATVYHQAAD 260
Query: 211 ITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSRE 270
IT KLV+E GGEA+A+T+WS+LT GD V E++ A P VL+ G+Y VIARN NYSR
Sbjct: 261 ITLKLVNEPGGEAIANTSWSVLTPGGDIVVEASGAFPDFVLAAGEYEVIARNNGVNYSRS 320
Query: 271 FSVLTGKSTIVEVLMRQ 287
F+V++G+ VEVL
Sbjct: 321 FTVVSGEDREVEVLTSS 337
>gi|319898840|ref|YP_004158933.1| hypothetical protein BARCL_0674 [Bartonella clarridgeiae 73]
gi|319402804|emb|CBI76355.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 246
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 143/241 (59%), Gaps = 4/241 (1%)
Query: 54 SGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEK 113
SG+ W ++ I +N L GG FDL PG YLI SFGH V+ +++ + +
Sbjct: 2 SGLVWRVYAPILGNENKLLLVAIYEGGTARFDLKPGSYLIHVSFGHASSVEHVSLENGQH 61
Query: 114 NQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNP--NHKALLITDKVRSGTLVRLG 171
K F L+AGG+ S G+ I + EL F+IY + N +I V++ ++VRL
Sbjct: 62 LIKN-FNLDAGGVVFNSTLFNGT-INEKELRFTIYEDEKENDDTGVILANVKAQSVVRLK 119
Query: 172 TNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSI 231
+Y + SHYG NAI+ + ++VE GKI +VT++++AA+I KLV + GGEA+ADT+WSI
Sbjct: 120 AGHYHVVSHYGSVNAIIRSDIQVEAGKITEVTLEHQAAQIILKLVRQEGGEALADTSWSI 179
Query: 232 LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMD 291
SGD + E+ + +VL EGDY IA+NK++ Y + FSV++G V V+ K +
Sbjct: 180 TNDSGDIIYETVGSYVLLVLVEGDYIAIAKNKDKIYQKVFSVISGHDKDVNVIANSKNIQ 239
Query: 292 K 292
+
Sbjct: 240 Q 240
>gi|154245581|ref|YP_001416539.1| hypothetical protein Xaut_1636 [Xanthobacter autotrophicus Py2]
gi|154159666|gb|ABS66882.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
Length = 357
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 87/254 (34%), Positives = 126/254 (49%), Gaps = 7/254 (2%)
Query: 37 QRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
+ AR + I G+ W +F + F L PG Y++ S
Sbjct: 107 AALGVFARFGADGAPIPRGLVWRVFADQPESTGAFPLVAESSEATPVFFLNPGGYIVHVS 166
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKAL 156
+G V +++ + + +Q F + AG +RL + PI +LTF I+ +
Sbjct: 167 YGFATVAQRVQMGPLSR--RQAFEVAAGALRLSADV-DDKPIPAQKLTFDIFEGSFLQGR 223
Query: 157 LITD----KVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+ +G +V L Y + S YG NA+V V V PGK+ D T+ +RAA+I
Sbjct: 224 TSSQPYYRGASAGEVVLLPEGTYHVVSTYGDANAVVRADVTVAPGKLTDATVHHRAAQIM 283
Query: 213 FKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
KLV GGEA ADT W+++T GDT+ ES A P+ VLSEGDYT IAR +N+SRE
Sbjct: 284 LKLVKVAGGEAQADTQWTVITPGGDTIKESIGAFPTFVLSEGDYTAIARKDGKNFSREIK 343
Query: 273 VLTGKSTIVEVLMR 286
V GK+ +EVL +
Sbjct: 344 VEAGKNQEIEVLAK 357
>gi|114706615|ref|ZP_01439516.1| hypothetical protein FP2506_12724 [Fulvimarina pelagi HTCC2506]
gi|114538007|gb|EAU41130.1| hypothetical protein FP2506_12724 [Fulvimarina pelagi HTCC2506]
Length = 390
Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats.
Identities = 95/256 (37%), Positives = 144/256 (56%), Gaps = 5/256 (1%)
Query: 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLIS 94
+ EARL+E + G+ W +F ++ + + K SF++ PG Y++
Sbjct: 129 PNAELVLEARLSEEGEIVPGGIVWRLFSAVPQLQGRSTLIATSKEAKPSFNVPPGAYIVH 188
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKP-GSPIVDDELTFSIYSNP-- 151
A+FG G+VK+I + N K+V +L AGG++L + G + L F I+++
Sbjct: 189 ATFGRAGIVKRIDFN--GVNVKEVVVLGAGGLKLDATVSSEGQAATESRLKFDIFADAER 246
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
+ + LI V G +VRL Y + S YG NA ++VE GK+ + T+Q+RAA+
Sbjct: 247 DSERELIASGVAPGEVVRLNAGLYHVVSTYGSINARTQADIRVEAGKLTEATLQHRAAQQ 306
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF 271
T KLV E GGEA+A TAW++ + SGD + +SA A SMVL+EGDY +ARN+E Y R F
Sbjct: 307 TLKLVREHGGEAIAGTAWTVTSMSGDILRKSAGAFASMVLAEGDYMAVARNRETTYQRSF 366
Query: 272 SVLTGKSTIVEVLMRQ 287
SV G+ VE+L+
Sbjct: 367 SVKAGEDADVEILLSD 382
>gi|158422573|ref|YP_001523865.1| hypothetical protein AZC_0949 [Azorhizobium caulinodans ORS 571]
gi|158329462|dbj|BAF86947.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 382
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 92/298 (30%), Positives = 141/298 (47%), Gaps = 14/298 (4%)
Query: 2 TISFSSYAKAENMHTTSTLLNNNISKGKGKRVV----DAQRITCE--ARLTENSTSIDSG 55
T SFS A + N + + + A ++T AR + ++
Sbjct: 80 TGSFSGPGPAPAQQGGGSR-NAVAAPSREPHAILPQAPAGKVTLGVFARFGADGATVPRA 138
Query: 56 VSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQ 115
V W +F + F L PG Y++ ++G+ +++ + + +
Sbjct: 139 VMWRVFADTPEASGAFPLVAESTEATPVFFLSPGGYIVHLTYGYATQAQRVVLGATSR-- 196
Query: 116 KQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKAL----LITDKVRSGTLVRLG 171
++ FIL AGG+RL + I + +++F IY + + +V L
Sbjct: 197 REAFILPAGGLRLQADV-DNKAITNSKVSFDIYEGSFLQGRTSSQPLYRGALPNEVVLLP 255
Query: 172 TNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSI 231
Y + S YG NA+V V V+ GK+ D + +RAA+IT KLV E GGEA+ADT WS+
Sbjct: 256 EGTYHVVSTYGDANAVVRADVTVQAGKLTDAMVHHRAAQITLKLVKEAGGEALADTQWSV 315
Query: 232 LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKR 289
+T GDT+ ES A P++VL+EG+Y IARN R SR+F V GK VEVL R
Sbjct: 316 ITPGGDTIKESIGAFPTVVLTEGEYVAIARNDGRVVSRDFKVELGKDKDVEVLASGAR 373
>gi|220926948|ref|YP_002502250.1| hypothetical protein Mnod_7208 [Methylobacterium nodulans ORS 2060]
gi|219951555|gb|ACL61947.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 299
Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats.
Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 6/257 (2%)
Query: 33 VVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL 92
V ++ A LT I G++W I++ S+ + + + +F L PG YL
Sbjct: 46 AVPEAALSLRAVLTSEGKPIRGGLTWRIYEDRSDA-GRPAILARSEEAQPTFRLPPGSYL 104
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS--N 150
+ ++G V K++T++ + +NAG +RL + I +L F+I+
Sbjct: 105 ANVTYGFVSTSKRVTLAPAGLTDQ--ITVNAGALRLAGAVG-DARIPGSQLAFAIFVPIG 161
Query: 151 PNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAK 210
N + L+ D V++G L+RL Y + S +G NAI +KVE G+I D T+ +RAA
Sbjct: 162 NNPEGRLVRDGVKAGELIRLPEGTYHVVSTWGDSNAIQRADLKVENGRITDATLNHRAAT 221
Query: 211 ITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSRE 270
+T KLV+ G EA A TA+S+LT GDT+ E+ A P + L+EG+Y +IAR+ R Y+++
Sbjct: 222 VTLKLVAAPGTEAFAGTAFSVLTPGGDTIREAIGAFPQVTLAEGEYQLIARHDGRVYTQD 281
Query: 271 FSVLTGKSTIVEVLMRQ 287
F V +G +E + +
Sbjct: 282 FKVESGVDRDIEAIAKD 298
>gi|170744337|ref|YP_001772992.1| hypothetical protein M446_6292 [Methylobacterium sp. 4-46]
gi|168198611|gb|ACA20558.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 312
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 81/251 (32%), Positives = 136/251 (54%), Gaps = 6/251 (2%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
++ A LT I G++W I++ + + + + +F L PG YL + ++G
Sbjct: 65 LSLRAVLTSEGKPIRGGLTWRIYEDRGDA-GKPALLARSDEPQPTFRLAPGSYLANVTYG 123
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS--NPNHKAL 156
V K++T++ + +NAG +RL + I +L F+I+ N +
Sbjct: 124 FVSTSKRVTLAPTGLQDQ--VTVNAGALRLAGAVG-DARIPPGQLAFAIFVPIGNNPEGR 180
Query: 157 LITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLV 216
L+ D V++G L+RL Y + S +G NAI +KVE G+I D T+ +RAA +T KLV
Sbjct: 181 LVRDGVKAGELIRLPEGTYHVVSTWGDSNAIQRADLKVENGRITDATLNHRAATVTLKLV 240
Query: 217 SEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTG 276
+ G EA A TA+S+LT GDT+ E+ A P + L+EG+Y +IAR+ + Y+++F V +G
Sbjct: 241 AAPGTEAFAGTAFSVLTPGGDTIREAIGAFPQVTLAEGEYQLIARHDGKVYTQDFKVESG 300
Query: 277 KSTIVEVLMRQ 287
+E + +
Sbjct: 301 VDRDIEAIAKD 311
>gi|298291400|ref|YP_003693339.1| hypothetical protein Snov_1410 [Starkeya novella DSM 506]
gi|296927911|gb|ADH88720.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length = 345
Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats.
Identities = 89/290 (30%), Positives = 143/290 (49%), Gaps = 22/290 (7%)
Query: 18 STLLNNNISKGKGKRVVDAQ---------------RITCEARLTENSTSIDSGVSWHIFD 62
S L I+ G+ +V I AR +N I G+ W IF
Sbjct: 45 SMALPALIAPGQQPQVPPKAGDPHSILPQPPAGKVAIGMSARFGDNDPFIPRGLVWRIFA 104
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
+ F L PG Y++ S+G V ++I V E+++++ +L+
Sbjct: 105 DRPEASGAYPLVAEAADPAPVFFLSPGGYVVHVSYGLASVARRIVVG--EESRREQLLLS 162
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKAL----LITDKVRSGTLVRLGTNNYQIT 178
AGG+ L+S PI ++T+ I+ + SG L+ L +Y +
Sbjct: 163 AGGVTLHSDV-SDKPIPAQKVTYDIFEGSFLQGRAASRPFYRGANSGELIVLPAGSYYVV 221
Query: 179 SHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT 238
S YG+ NA++ V V PGK+ D T+ +RA +I +LV GG+ + DT WS+LT GD+
Sbjct: 222 STYGEGNAVIQADVAVAPGKVTDATLHHRAGEIALRLVKVAGGDPLPDTQWSVLTPGGDS 281
Query: 239 VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
V ES N P+ VL+EG+YT +AR + + Y++EF+V +GK VEV++ ++
Sbjct: 282 VKESINTLPTFVLAEGEYTAVARYEGKTYTKEFTVESGKDGPVEVMLGEQ 331
>gi|188581524|ref|YP_001924969.1| hypothetical protein Mpop_2272 [Methylobacterium populi BJ001]
gi|179345022|gb|ACB80434.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 306
Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats.
Identities = 81/273 (29%), Positives = 140/273 (51%), Gaps = 10/273 (3%)
Query: 18 STLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLS-TTKK 76
S + I ++ A ++ + SG++W ++ N T +
Sbjct: 40 SPGVTGPILPPPAAEG--EADLSLSAVFAGSNGPVRSGLTWRVYGE--NGDGTRPAIVAR 95
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
+F L G Y+++ ++G+ K+IT++ ++ + AG ++L
Sbjct: 96 SNDPAPTFKLAAGAYVVTVTYGYASASKRITMAGTANTEQ--LRVAAGALKLSGAVG-DQ 152
Query: 137 PIVDDELTFSIYS--NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
I ++L+FS+Y N + L+ +++G +VRL Y + S YG NAI ++V
Sbjct: 153 KIPGNQLSFSVYVPIGTNSEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLRV 212
Query: 195 EPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEG 254
E GK+ D T+ +RAA +T KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+EG
Sbjct: 213 ENGKVTDATMNHRAATVTLKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAEG 272
Query: 255 DYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
DY +IAR+ + ++REF V +G +EV+ +
Sbjct: 273 DYVLIARHDGQVFTREFKVESGMDRDIEVVAKG 305
>gi|218677880|ref|ZP_03525777.1| hypothetical protein RetlC8_03042 [Rhizobium etli CIAT 894]
Length = 254
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 132/226 (58%), Gaps = 5/226 (2%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSI 64
++ + + ++S + LN I+ G + + EA+LT +S ++ G+SW++F I
Sbjct: 29 AFKDFKQLDSSSKMPKLNAFIAPGTAPEGAKLRDVAMEAKLTADSAPVEDGLSWYVFSPI 88
Query: 65 SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG 124
+ L GG +F L PGDY ++ SFG GV KK+TV + + KQV +L+AG
Sbjct: 89 AGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVGKQVMVLDAG 148
Query: 125 GIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
G+ L ++ + I D+L+FSIYS + + L+ V T+VRL Y I S Y
Sbjct: 149 GLLLNAVSGTDARIRPDQLSFSIYSSEVREDGERGLVMADVSPNTVVRLNAGTYHIVSEY 208
Query: 182 GKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADT 227
G NA++ ++VE GK+ + TIQ+RAA++TFKLVS+ GGEA+ADT
Sbjct: 209 GSVNAVIRADIQVEAGKLTEATIQHRAAQVTFKLVSDAGGEAIADT 254
>gi|163851741|ref|YP_001639784.1| hypothetical protein Mext_2318 [Methylobacterium extorquens PA1]
gi|163663346|gb|ABY30713.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 349
Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 17 TSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLS-TTK 75
T +L ++G+ +T A + I SG++W ++ N T
Sbjct: 87 TGPVLPPPAAEGEA-------DLTLSAVFVGANGPIRSGLTWRVYGE--NGDGTRPAIVA 137
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPG 135
+ +F L G Y+ + ++G+ K+IT++ + + AG ++L
Sbjct: 138 RSNDPAPTFKLAAGAYVATVTYGYASASKRITMAGTANTDQ--LRVAAGALKLSGAVG-D 194
Query: 136 SPIVDDELTFSIYS--NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK 193
I ++L FS+Y N + L+ +++G +VRL Y + S YG NAI ++
Sbjct: 195 QKIPGNQLGFSVYVPIGTNSEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLR 254
Query: 194 VEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
VE GK+ D T+ +RAA +T KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+E
Sbjct: 255 VENGKVTDATMNHRAATVTLKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAE 314
Query: 254 GDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
GDY +IAR+ + ++REF V +G +EV+ +
Sbjct: 315 GDYVLIARHDGQVFTREFKVESGMDRDIEVVAKG 348
>gi|296445038|ref|ZP_06886999.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
gi|296257459|gb|EFH04525.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length = 299
Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 136/272 (50%), Gaps = 17/272 (6%)
Query: 31 KRVVDAQRITCEARLT-ENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPG 89
+ + + A LT ++ + G+ W IF+ + + +L G
Sbjct: 26 RTPRSSAILRLSAVLTPADAAPVRGGIRWRIFEETPGDDGARRLVAETKDAAPAQELPDG 85
Query: 90 DYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY- 148
Y++ A+FG G +++ + N + +LNAGG++L + +PI L SIY
Sbjct: 86 VYIVHAAFGLAGATRRVVIEGG--NVSERLVLNAGGLKLIDMLG-DTPIPAQRLAISIYV 142
Query: 149 -SNPNHKALLITDKVRSGTLVRLGTNNYQITSHY-----------GKYNAIVSTVVKVEP 196
N +A L+ + G ++ L Y I S N++++ ++V
Sbjct: 143 PERGNSEAKLVLANAQGGEILCLPEGAYHIVSTLLDTTQGSQGDNNATNSVITADLRVAA 202
Query: 197 GKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDY 256
GK+I+ T+++RAA +T KLV++ GGEA+A+T++S+LT GD + E A PS+VL+EG+Y
Sbjct: 203 GKLIEATLRHRAATMTLKLVNQRGGEALANTSFSVLTPGGDVIRELIGAFPSLVLAEGEY 262
Query: 257 TVIARNKERNYSREFSVLTGKSTIVEVLMRQK 288
VIAR+ + Y F V + + VE+ R +
Sbjct: 263 VVIARHDGKTYQETFRVQSTQDREVEISARAE 294
>gi|254561512|ref|YP_003068607.1| hypothetical protein METDI3099 [Methylobacterium extorquens DM4]
gi|254268790|emb|CAX24751.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 310
Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 17 TSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLS-TTK 75
T +L ++G+ +T A + I SG++W ++ N T
Sbjct: 48 TGPVLPPPAAEGEA-------DLTLSAVFVGANGPIRSGLTWRVYGE--NGDGTRPAIVA 98
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPG 135
+ +F L G Y+ + ++G+ K+IT++ + + AG ++L
Sbjct: 99 RSNDPAPTFKLAAGAYVATVTYGYASASKRITMAGTANTDQ--LRVAAGALKLSGAVG-D 155
Query: 136 SPIVDDELTFSIYS--NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK 193
I ++L FS+Y N + L+ +++G +VRL Y + S YG NAI ++
Sbjct: 156 QKIPGNQLGFSVYVPIGTNSEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLR 215
Query: 194 VEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
VE GK+ D T+ +RAA +T KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+E
Sbjct: 216 VENGKVTDATMNHRAATVTLKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAE 275
Query: 254 GDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
GDY +IAR+ + ++REF V +G +EV+ +
Sbjct: 276 GDYVLIARHDGQVFTREFKVESGMDRDIEVVAKG 309
>gi|323137839|ref|ZP_08072914.1| hypothetical protein Met49242DRAFT_2302 [Methylocystis sp. ATCC
49242]
gi|322396842|gb|EFX99368.1| hypothetical protein Met49242DRAFT_2302 [Methylocystis sp. ATCC
49242]
Length = 331
Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 133/266 (50%), Gaps = 17/266 (6%)
Query: 36 AQRITCEARL-TENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLIS 94
+ A L + ++ + SGV W IF+ + + + + L G Y++
Sbjct: 60 LSTLHLTATLASNDAQPVRSGVVWRIFEERAQPDGSHKLVAQSEEAAPTLPLPDGAYVVH 119
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIY--SNPN 152
AS+G GV ++I V +N + LNAGG+++ + + I L+ SIY N
Sbjct: 120 ASYGLAGVTRRIVVE--GRNISERVPLNAGGLKIVDMLGE-TKIPPQRLSISIYVPERGN 176
Query: 153 HKALLITDKVRSGTLVRLGTNNYQITSHY-----------GKYNAIVSTVVKVEPGKIID 201
+A L+ R ++ L +Y I S N++V+ +KV GK+I+
Sbjct: 177 SEAKLVLANARGDEIISLPEGSYHIVSTLLDTTQGAQGGNNATNSVVTADLKVPAGKLIE 236
Query: 202 VTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIAR 261
T+++ AA +T KLV GGEA+A+T +S+LT GD + E A PS+VL+EG+Y IAR
Sbjct: 237 ATLKHHAATMTLKLVKAPGGEALANTTFSVLTPGGDVIRELIGAFPSLVLAEGEYVAIAR 296
Query: 262 NKERNYSREFSVLTGKSTIVEVLMRQ 287
++ + + F V + K VEV+ +
Sbjct: 297 HEGKTFQNTFRVQSTKDADVEVIAKD 322
>gi|218530546|ref|YP_002421362.1| hypothetical protein Mchl_2593 [Methylobacterium chloromethanicum
CM4]
gi|218522849|gb|ACK83434.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 306
Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 17 TSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLS-TTK 75
T +L ++G+ +T A + I SG++W ++ N T
Sbjct: 44 TGPVLPPPAAEGEA-------DLTLSAVFVGANGPIRSGLTWRVYGE--NGDGTRPAIVA 94
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPG 135
+ +F L G Y+ + ++G+ K+IT++ + + AG ++L
Sbjct: 95 RSNDPAPTFKLAAGAYVATVTYGYASASKRITMAGTANTDQ--LRVAAGALKLSGAVG-D 151
Query: 136 SPIVDDELTFSIYS--NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK 193
I ++L FS+Y N + L+ +++G +VRL Y + S YG NAI ++
Sbjct: 152 QKIPGNQLGFSVYVPIGTNSEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLR 211
Query: 194 VEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
VE GK+ D T+ +RAA +T KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+E
Sbjct: 212 VENGKVTDATMNHRAATVTLKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAE 271
Query: 254 GDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
GDY +IAR+ + ++REF V +G +EV+ +
Sbjct: 272 GDYVLIARHDGQVFTREFKVESGMDRDIEVVAKG 305
>gi|254470478|ref|ZP_05083882.1| FHA domain containing protein [Pseudovibrio sp. JE062]
gi|211960789|gb|EEA95985.1| FHA domain containing protein [Pseudovibrio sp. JE062]
Length = 361
Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 9/291 (3%)
Query: 3 ISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQR---ITCEARLTENSTSIDSGVSWH 59
S Y T T + A+L E + ++ G+ W
Sbjct: 70 DPLSGYQGQSLAPTLGTSFLPYAPPAVSAEQAPIGAQPVLYLVAKLAEGTPNLTRGLKWR 129
Query: 60 IFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVF 119
++ S N +L+ F L PG YL+ SFG V + + S K
Sbjct: 130 VYSSKENADGSLNMVASSQDQDAEFRLDPGTYLVHTSFGKVTATTRYELKSGVKTG--TI 187
Query: 120 ILNAGGIRLYSIYKPGSPIVDDELTFSIYS---NPNHKALLITDKVRSGTLVRLGTNNYQ 176
ILNAGGIRL + + +++ F+IY + LI ++ G LV + Y
Sbjct: 188 ILNAGGIRLDAALGNDQKMPREDVRFNIYDMTYDATGDRGLIASGIKPGELVPVSAGTYH 247
Query: 177 ITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASG 236
+ S YG NA+V + V+ GK+ + T+ ++A IT KLVS ++A+T+W+IL+ G
Sbjct: 248 VESRYGDINAVVRADIHVQAGKLTEATLYHQAGNITLKLVSAKNKTSLANTSWTILSPGG 307
Query: 237 DTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKST-IVEVLMR 286
DTV A + L+ G YTV+ARN Y EF+V + VEVL
Sbjct: 308 DTVASGNGAFLDLTLAAGTYTVMARNNGEMYRDEFTVNPSVNNVEVEVLAE 358
>gi|240138904|ref|YP_002963379.1| hypothetical protein MexAM1_META1p2319 [Methylobacterium extorquens
AM1]
gi|240008876|gb|ACS40102.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 310
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 83/274 (30%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 17 TSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLS-TTK 75
T +L ++G+ ++ A + I SG++W ++ N T
Sbjct: 48 TGPVLPPPAAEGEA-------DLSLSAVFVGANGPIRSGLTWRVYGE--NGDGTRPAIVA 98
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPG 135
+ +F L G Y+ + ++G+ K+IT++ + + AG ++L
Sbjct: 99 RSNDPAPTFKLAAGAYVATVTYGYASASKRITMAGTANTDQ--LRVAAGALKLSGAVG-D 155
Query: 136 SPIVDDELTFSIYS--NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK 193
I ++L FS+Y N + L+ +++G +VRL Y + S YG NAI ++
Sbjct: 156 QKIPGNQLGFSVYVPIGTNSEGRLVRSGIKAGEIVRLPEGTYHVVSSYGDSNAIQRADLR 215
Query: 194 VEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
VE GK+ D T+ +RAA +T KLV+ G EA A TA+S+LT GDT+ E+ A PS+ L+E
Sbjct: 216 VENGKVTDATMNHRAATVTLKLVAAPGSEAFAGTAFSVLTPGGDTIREAIGAFPSVTLAE 275
Query: 254 GDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
GDY +IAR+ + ++REF V +G +EV+ +
Sbjct: 276 GDYVLIARHDGQVFTREFKVESGMDRDIEVVAKG 309
>gi|304391868|ref|ZP_07373810.1| FHA domain-containing protein [Ahrensia sp. R2A130]
gi|303296097|gb|EFL90455.1| FHA domain-containing protein [Ahrensia sp. R2A130]
Length = 313
Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 133/259 (51%), Gaps = 7/259 (2%)
Query: 32 RVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKN-TLSTTKKIIGGKVSFDLFPGD 90
R+ +L + + G+ W ++ L GG +FDL G
Sbjct: 58 NGRPIYRLVLSGKLVTDGPVLKDGMVWRVYRDRRGGDGEALPLIATATGGTGTFDLNAGT 117
Query: 91 YLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS- 149
Y I A+FG G K++ +S + ++ +L AGG++L + G PI ++L FSIY
Sbjct: 118 YFIHAAFGRAGAGKRVVLSGESSTEE--LVLEAGGLQL-AASAAGKPIPSEKLRFSIYER 174
Query: 150 --NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNR 207
+ + + LI V ++RL Y + S YG NA V ++V+ G++ +Q+R
Sbjct: 175 EADESGERQLIALNVAGDKIIRLKAGTYHVLSRYGTINATVRADLQVKAGELTKAELQHR 234
Query: 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNY 267
+ I+ + VSE GG AVA+TAW++ TA G+ V S++ +PS+VL+EG+Y R +
Sbjct: 235 GSPISLRAVSEAGGVAVANTAWTVFTADGEQVFASSSIAPSLVLAEGEYEAAVRYGAEEF 294
Query: 268 SREFSVLTGKSTIVEVLMR 286
+ F+V TG+ +E+L+
Sbjct: 295 RQPFTVGTGEEKRIEILLN 313
>gi|170746714|ref|YP_001752974.1| hypothetical protein Mrad2831_0265 [Methylobacterium radiotolerans
JCM 2831]
gi|170653236|gb|ACB22291.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 305
Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 18 STLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKI 77
S + +++ A L+ T++ G++W I++ + S +
Sbjct: 37 SPSITTPNLPPSLPPAEPEAQLSLSALLSGPGTALRQGLAWRIYEDRGDGTRP-SIVARS 95
Query: 78 IGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSP 137
+ F L PG Y+ + ++G K+I + + A +
Sbjct: 96 TEAEPHFTLAPGAYVATVTYGFASASKRIVMGGQPTTDTLRVAAGA---LKLAGAVGDQK 152
Query: 138 IVDDELTFSIYS--NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
I ++TFS++ N + L+ +++G L+RL Y + S YG+ NAI ++VE
Sbjct: 153 IPPGQVTFSVFVPVGTNSEGRLVRAGIKTGELLRLPEGTYHVVSTYGESNAIQRADLRVE 212
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + T+ +RAA +T KLV+ G EA A TA+S+LT GDT+ E+ A P + L+EGD
Sbjct: 213 NGKVTEATLNHRAATVTLKLVAAPGAEAFAGTAFSVLTPGGDTIREAIGAFPQVTLAEGD 272
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
Y +IAR+ + Y+REF V +G +EV+ +
Sbjct: 273 YVLIARHDGQVYTREFKVESGLDRDIEVVAKS 304
>gi|182678787|ref|YP_001832933.1| hypothetical protein Bind_1816 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634670|gb|ACB95444.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 313
Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 16/274 (5%)
Query: 25 ISKGKGKRVVDAQRITCEARLTE-NSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVS 83
+ G+ ++ A T + + GV+W IF+ + T + +
Sbjct: 44 LQNRAGEADTSRSTLSLSAYYTATDMQPVH-GVTWRIFEEAAQPNGTHKMLVESANAMPA 102
Query: 84 FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDEL 143
L G YLI A++G G K++ +S +++ +LNAG +R+ + +PI +L
Sbjct: 103 LPLPDGPYLIHAAYGLAGATKRVVLSGAPLSER--IVLNAGALRIVGMLGE-TPISPAKL 159
Query: 144 TFSIY--SNPNHKALLITDKVRSGTLVRLGTNNYQITSH---------YGKYNAIVSTVV 192
SIY N +A L+ ++G ++ L NY + S N++V+ +
Sbjct: 160 RISIYVPERGNSEAKLVLADGKAGDVIGLPEGNYHVVSTILDTVSGGAVNTTNSVVNADL 219
Query: 193 KVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLS 252
KV+ GKI D T+++ AA++T KLV+ GGEA+A+TA++ILT GD + E A PS+VL+
Sbjct: 220 KVQAGKITDATLRHSAAQMTLKLVNNPGGEALANTAFTILTPGGDVIREMIGAFPSLVLA 279
Query: 253 EGDYTVIARNKERNYSREFSVLTGKSTIVEVLMR 286
G+Y IAR+ + Y F V++ VEVL +
Sbjct: 280 AGEYVAIARHDNKTYQTTFKVVSTLDRDVEVLAK 313
>gi|217976637|ref|YP_002360784.1| hypothetical protein Msil_0448 [Methylocella silvestris BL2]
gi|217502013|gb|ACK49422.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 330
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 14/266 (5%)
Query: 32 RVVDAQRITCEARLTE-NSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGD 90
V + A L+ ++ + GV W +F+ + + + L G
Sbjct: 68 EAVSGNILHLTAYLSATDAQPLRGGVHWRVFNERVELDGSHVLVAESTDSTPALTLPDGA 127
Query: 91 YLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS-PIVDDELTFSIYS 149
+++ A+FG G K++T+ K +++ LNAG +R+ + P +++ +
Sbjct: 128 FIVHAAFGLAGATKRVTIEGKGVSER--VALNAGALRIMGLLGDAPLPATKSQISVYVPE 185
Query: 150 NPNHKALLITDKVRSGTLVRLGTNNYQITSHY---------GKYNAIVSTVVKVEPGKII 200
N +A L+ ++SG + L NY + S N++++ ++V+ GK+
Sbjct: 186 RNNSEAKLVA-NIKSGETIGLPEGNYHVVSTLLDPQTTGAVNPTNSVINADLRVQAGKLT 244
Query: 201 DVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIA 260
D ++++RAA +T KLVS GEA+A+T+++ILT GD + E A PS+VL+EG+Y IA
Sbjct: 245 DASLRHRAATMTLKLVSGPSGEALANTSFTILTPGGDVIREMIGAFPSLVLAEGEYVAIA 304
Query: 261 RNKERNYSREFSVLTGKSTIVEVLMR 286
R+ Y F V + VEVL +
Sbjct: 305 RHDNNVYQTNFKVESTLDRDVEVLAK 330
>gi|312114133|ref|YP_004011729.1| hypothetical protein Rvan_1371 [Rhodomicrobium vannielii ATCC
17100]
gi|311219262|gb|ADP70630.1| hypothetical protein Rvan_1371 [Rhodomicrobium vannielii ATCC
17100]
Length = 331
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 88/259 (33%), Positives = 143/259 (55%), Gaps = 4/259 (1%)
Query: 31 KRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGD 90
+T A L+E S + + V W +F + + T KI + + +L PG
Sbjct: 74 PNSGPPAPVTLTAYLSEGSAPMVADVVWRVFQQRNARDGTYKIVTKIHEARPTIELKPGR 133
Query: 91 YLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSN 150
YL++ ++G + +KI V + + + F++NAGG+RL + G + + L IYS+
Sbjct: 134 YLVNVAYGRANLTRKIDVWPQTPSN-EDFVVNAGGLRLMATLAHGPIVAEHLLKLEIYSD 192
Query: 151 PNHK---ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNR 207
+ + +R G ++RL + Y I S YG N++VST + +EPGKI + + +
Sbjct: 193 AQDQTGNRQRLFGDLRPGIVIRLNSGIYHIVSTYGDANSVVSTDIVIEPGKIAEANVDHD 252
Query: 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKERNY 267
A K+T KLV GGEAVA T W+I A G+ + ESA A P+ VL+ G+Y V A++ ER +
Sbjct: 253 AGKVTLKLVQRRGGEAVAGTRWTIYNAGGEVIRESAGAFPTHVLAAGEYRVAAQHGERQF 312
Query: 268 SREFSVLTGKSTIVEVLMR 286
+ F++ G +T+VEVLM+
Sbjct: 313 AGAFTIAAGDTTLVEVLMQ 331
>gi|300022609|ref|YP_003755220.1| hypothetical protein Hden_1085 [Hyphomicrobium denitrificans ATCC
51888]
gi|299524430|gb|ADJ22899.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 353
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 87/270 (32%), Positives = 132/270 (48%), Gaps = 8/270 (2%)
Query: 19 TLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKII 78
N + + +GK + + R+ A LT + ID G+ W IF S +
Sbjct: 53 KSPNTTVIEREGKTGLPSLRLV--ALLTGDGQQIDEGLVWRIFQST-GPTGKAKLVLESH 109
Query: 79 GGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPI 138
L PGDY ++A+FG + +KI V + + F+LNAGG+RL +
Sbjct: 110 EATPLVKLQPGDYTVNAAFGRANLTRKIAVKTGGP-PYEAFVLNAGGLRLGATVAGAPAA 168
Query: 139 VDDELTFSIYSNPNHK---ALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
T+SIY++ + + ++ + ++RL + Y+I S YG NA + V VE
Sbjct: 169 PGAV-TYSIYADDHDQFDSRSVVISGAKPNLIIRLNSGIYRIVSQYGDANAKIEADVTVE 227
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGD 255
GK+ + ++ + K TFKLV+ GGEAV DT W+I T G+ V ES A P+ VL+ G
Sbjct: 228 AGKLTEASVTHTGGKATFKLVTRSGGEAVPDTRWTIQTDDGEMVKESVGALPTHVLAPGK 287
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEVLM 285
Y V A + Y F + G+ VEVLM
Sbjct: 288 YIVTASSGGHLYKNRFEIADGEVKNVEVLM 317
>gi|255605664|ref|XP_002538430.1| conserved hypothetical protein [Ricinus communis]
gi|223512190|gb|EEF23954.1| conserved hypothetical protein [Ricinus communis]
Length = 241
Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats.
Identities = 85/167 (50%), Positives = 118/167 (70%), Gaps = 3/167 (1%)
Query: 128 LYSIYKPGSPIVDDELTFSIYSNP---NHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
L + P I +EL+FSIYS+ + + L+ D V+ TLV L Y + S YG+
Sbjct: 23 LECVSGPDVCIPPNELSFSIYSSETKEDGERGLVMDDVKPNTLVGLSAGTYHVVSEYGEV 82
Query: 185 NAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESAN 244
NA++ ++VE GK+ + TIQ+RAAK+TFKLVS+ GGEA+ADTAWSILTA+GD VGES +
Sbjct: 83 NAVIRADIQVEAGKVTEATIQHRAAKLTFKLVSDAGGEAIADTAWSILTAAGDIVGESVS 142
Query: 245 ASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMD 291
A P+MVL+EG YT +ARNK++ Y R+F+V G +T VEVLM+Q++
Sbjct: 143 AFPTMVLAEGRYTAVARNKDKIYQRDFTVAAGMNTDVEVLMKQQQPQ 189
Score = 43.4 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 52/171 (30%), Gaps = 7/171 (4%)
Query: 35 DAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLIS 94
+R E + + +S+ I+ S + + + L G Y +
Sbjct: 17 STRRHGLECVSGPDVCIPPNELSFSIYSSETKEDGERGLVMDDVKPNTLVGLSAGTYHVV 76
Query: 95 ASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNH 153
+ +G V V + + K + A + + G + D +SI +
Sbjct: 77 SEYGEVNAVIRADIQVEAGKVTEATIQHRAAKLTFKLVSDAGGEAIADT-AWSILTAAGD 135
Query: 154 KALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTI 204
++ + V + + L Y + I V G DV +
Sbjct: 136 ---IVGESVSAFPTMVLAEGRYTAVARNKD--KIYQRDFTVAAGMNTDVEV 181
>gi|218506264|ref|ZP_03504142.1| hypothetical protein RetlB5_01007 [Rhizobium etli Brasil 5]
Length = 217
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Query: 3 ISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFD 62
+F + + E+ LN I+ G + + EA+LT + T ++ G+SW++F
Sbjct: 51 DAFKDFKQIESTPKM-PKLNAFIAPGTAPDAAKLRDVAMEAKLTADGTPVEDGLSWYVFS 109
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN 122
I+ L GG +F L PGDY ++ SFG GV KK+TV + + KQV +L+
Sbjct: 110 PIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVDKQVMVLD 169
Query: 123 AGGIRLYSIYKPGSPIVDDELTFSIYSNP---NHKALLITDKVRSGTL 167
AGG+ L ++ + I DEL+FSIYS+ + + L+ V T+
Sbjct: 170 AGGLLLNAVSGTDARIRPDELSFSIYSSEVRDDGERGLVVADVSPNTV 217
>gi|300022610|ref|YP_003755221.1| von Willebrand factor A [Hyphomicrobium denitrificans ATCC 51888]
gi|299524431|gb|ADJ22900.1| von Willebrand factor type A [Hyphomicrobium denitrificans ATCC
51888]
Length = 638
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 99/269 (36%), Gaps = 6/269 (2%)
Query: 15 HTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTT 74
H + T+ N + R+ A N + + + I++
Sbjct: 373 HASRTMSLNAGDVKTENVTLGTGRVELSATTGTNG-VVPDDLIYTIYEDDPESPTGRREV 431
Query: 75 KKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKP 134
+ + SF L G Y SA G V ++I + + + KQ L ++L ++
Sbjct: 432 GRSHASEASFVLPSGTYYASARSGAADVRQRIAIGA-GETVKQTLTLALAPLKLSTVVAG 490
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKV 194
+ + I KA I V L Y++T+ Y + +
Sbjct: 491 SPATAAQGIVYRIDKADGDKAR-IARAVGPDAAFSLPPGRYKVTATLAAYPLSTAQDFTL 549
Query: 195 EPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEG 254
E GK ++ T++ ++F+ +++ A +D W ++ +SG V +L+ G
Sbjct: 550 EAGKPVEATLRIEGGMVSFRPPADI---ATSDVYWEVMDSSGAPVWRKTGRDAKTLLAPG 606
Query: 255 DYTVIARNKERNYSREFSVLTGKSTIVEV 283
Y V ++ +F V G++ VE+
Sbjct: 607 RYKVRVESQSTRRETDFDVRAGETKEVEI 635
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 91/248 (36%), Gaps = 23/248 (9%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG 98
+ A L E S + + W IF + + G +S L G Y I G
Sbjct: 238 LRASANLAEGSPLLTVPMRWSIFKA-----GEKDIAGRSTGPDISAKLAAGSYDIEVELG 292
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLI 158
V ++ITV+ + + ++A +++ +I GSP + T ++ +
Sbjct: 293 SVVARRQITVT-DGAAESIIIPIDAAHLKVNAIAAKGSP-PSETATMTVAAGDK------ 344
Query: 159 TDKVRSGTLV--RLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLV 216
+ ++ L +Y +T G +A + + + G + + ++
Sbjct: 345 PVGLARNGVIDLYLPPADYTVTIADGVAHASRT--MSLNAGDVKTENVTLGTGRVELSAT 402
Query: 217 SEMGGEAVADTAWSILTASGDT------VGESANASPSMVLSEGDYTVIARNKERNYSRE 270
+ G D ++I ++ VG S + S VL G Y AR+ + +
Sbjct: 403 TGTNGVVPDDLIYTIYEDDPESPTGRREVGRSHASEASFVLPSGTYYASARSGAADVRQR 462
Query: 271 FSVLTGKS 278
++ G++
Sbjct: 463 IAIGAGET 470
>gi|218662036|ref|ZP_03517966.1| hypothetical protein RetlI_22423 [Rhizobium etli IE4771]
Length = 153
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 60/103 (58%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
Query: 193 KVEPGKI-IDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVL 251
+V+ GK + TIQ+RAA+ITFKLVSE GGEA+ADTAWSILTA+GD+VGES +A P+MVL
Sbjct: 7 RVDAGKTGLRGTIQHRAAQITFKLVSEAGGEAIADTAWSILTAAGDSVGESVSAFPTMVL 66
Query: 252 SEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNG 294
+EG+Y+ +ARNK++ Y R+F V+ G++T VEVLM+ ++ +
Sbjct: 67 AEGEYSAVARNKDKIYQRDFKVVAGRNTDVEVLMKDQQPQQPA 109
>gi|46204414|ref|ZP_00050037.2| hypothetical protein Magn03003728 [Magnetospirillum magnetotacticum
MS-1]
Length = 198
Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 19 TLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKII 78
+L ++G+ +T A + I SG++W I++ + + +
Sbjct: 46 PMLPPPAAEGEA-------DLTLSAVFAGANLPIRSGLAWRIYEDR-GEAGRPAIVARSN 97
Query: 79 GGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPI 138
+F L G Y+ + ++G+ K+IT+S ++ + AG ++L I
Sbjct: 98 DPAPTFKLAAGAYVATVTYGYASASKRITMSGNPS--REELRVAAGALKLSGAV-SDQRI 154
Query: 139 VDDELTFSIYS--NPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
+L FS++ N + L+ +++G +VRL Y + S+
Sbjct: 155 PAAQLAFSVFVPIGTNSEGRLVRSGIKAGEIVRLPEGTYHVVSN 198
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 10/141 (7%)
Query: 126 IRLYSIYKPGSPIVDDELTFSIYSN--PNHKALLITDKVRSGTLVRLGTNNYQITSHYGK 183
+ L +++ + + L + IY + + ++ +L Y T YG
Sbjct: 59 LTLSAVFAGANLPIRSGLAWRIYEDRGEAGRPAIVARSNDPAPTFKLAAGAYVATVTYGY 118
Query: 184 YNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSIL-----TASGDT 238
+A + + G ++ A + A A+S+ + G
Sbjct: 119 ASASKR--ITM-SGNPSREELRVAAGALKLSGAVSDQRIPAAQLAFSVFVPIGTNSEGRL 175
Query: 239 VGESANASPSMVLSEGDYTVI 259
V A + L EG Y V+
Sbjct: 176 VRSGIKAGEIVRLPEGTYHVV 196
>gi|218662646|ref|ZP_03518576.1| hypothetical protein RetlI_26162 [Rhizobium etli IE4771]
Length = 155
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 7 SYAKAENMHTTSTL--LNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSI 64
++ + + +TS + LN I+ G + + EA+LT + T+++ G+SW++F I
Sbjct: 43 AFKDFKQLDSTSKMPKLNAFIAPGTAPEGAKLRDVAMEAKLTTDGTAVEDGLSWYVFSPI 102
Query: 65 SNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQ 117
+ L GG +F L PGDY ++ SFG GV KK+TV + + KQ
Sbjct: 103 AGPDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGEVDKQ 155
>gi|312114132|ref|YP_004011728.1| hypothetical protein Rvan_1370 [Rhodomicrobium vannielii ATCC
17100]
gi|311219261|gb|ADP70629.1| hypothetical protein Rvan_1370 [Rhodomicrobium vannielii ATCC
17100]
Length = 627
Score = 79.6 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 96/262 (36%), Gaps = 19/262 (7%)
Query: 39 ITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKII----GGKVSFDLFPGDYLIS 94
+ A L +D+GV+W IF + + + GG+ L G Y +
Sbjct: 292 VVLSATLAPGLPMLDAGVTWEIFKIVPTPTGQMREADAPLWVGGGGQAKAKLPDGRYKVQ 351
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYS-IYKPGSPIVDDELTFSIYSNPNH 153
++G + V ++ L+AG I + + G P V T
Sbjct: 352 LTYGLATASAEFAVEGSR--VERTVPLDAGTIAVEALRLPGGDPAVGAFFTLCRQGANGA 409
Query: 154 KALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
+ + + + ++ + +Y + + G + + T V+VE GK+ V++ +
Sbjct: 410 REEIGRSSIAP-AIFQVNSGSYILAATAGL--SRLETPVRVEGGKVSVVSMALNVGTLAI 466
Query: 214 KLVSEMGGEAVADTAWSILTA--------SGDTVGESANASPSMVLSEGDYTVIARNKER 265
+ ++ + A AW L A G + + ASP + L G Y +
Sbjct: 467 RTLAAPTAQ-TALPAWHRLFADGANPAAKGGPPLVRLSGASPRIDLPAGTYRLETVYGAI 525
Query: 266 NYSREFSVLTGKSTIVEVLMRQ 287
R SV G++T +++
Sbjct: 526 RDVRTVSVAAGRTTAENIILDA 547
Score = 44.9 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 47/146 (32%), Gaps = 13/146 (8%)
Query: 59 HIFDS--ISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQK 116
+F K + G DL G Y + +G + V+ ++V++ +
Sbjct: 483 RLFADGANPAAKGGPPLVRLS-GASPRIDLPAGTYRLETVYGAIRDVRTVSVAA-GRTTA 540
Query: 117 QVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHK--ALLITDKVRSGTLVRLGTNN 174
+ IL+AG ++ + + +Y + A + L
Sbjct: 541 ENIILDAGEAKIALPFGKQDGVCA------VYEAGGERAAASPLVRAAGGEPHFILRAGR 594
Query: 175 YQITSHY-GKYNAIVSTVVKVEPGKI 199
Y + K +A + + G++
Sbjct: 595 YDLECRAKNKPDAPRRAEIVIVAGEV 620
>gi|260463531|ref|ZP_05811730.1| von Willebrand factor type A [Mesorhizobium opportunistum WSM2075]
gi|259030622|gb|EEW31899.1| von Willebrand factor type A [Mesorhizobium opportunistum WSM2075]
Length = 552
Score = 79.2 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 18/254 (7%)
Query: 42 EARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVG 101
A L E + G +W ++ + S+ S T + K + L PGDY+I A G
Sbjct: 234 TAVLAEGGDPVTDGNAWEVYKAKSDGTRGDSVTTEYGAYKAN--LEPGDYVIVARDGEAK 291
Query: 102 VVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDK 161
V +K+ + + + K +F LNAG + ++ G+ +VD Y + ++
Sbjct: 292 VEQKVKIEAGQ-VAKPLFTLNAGTLVIHPRPSAGADVVDGAAVVIDYPSADN-----PAT 345
Query: 162 VRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGG 221
T L + ++T G+ +VS + + GK ++ I + GG
Sbjct: 346 YYGTTKTVLPAGDEKVTVTIGQG--VVSETIPLAAGKTVEKDIIVGVGHVVANAYYTAGG 403
Query: 222 EAV--ADTAWSI------LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFSV 273
+ + + I + + D V + L DY +IA + F+V
Sbjct: 404 DKADGSGIGFKIVKAKKKIDGTRDEVTYAYGPDSKFDLPPDDYVLIATVDLAVVEQPFNV 463
Query: 274 LTGKSTIVEVLMRQ 287
G+ V+V M
Sbjct: 464 KVGEFQDVKVTMNA 477
>gi|319782123|ref|YP_004141599.1| von Willebrand factor type A [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168011|gb|ADV11549.1| von Willebrand factor type A [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 554
Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 18/253 (7%)
Query: 43 ARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGV 102
A L E + G +W I+ + + + + K + L PGDY++ AS G
Sbjct: 237 AVLAEGGDPVTDGNAWEIYKAKPDGTRGDYVSTEYGAYKAN--LEPGDYIVVASDGQAKT 294
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKV 162
+K+ + + + + +F LNAG + ++ G+ +VD Y + +
Sbjct: 295 EQKVKIEAGQ-VYEPLFNLNAGTLIIHPRPSEGADVVDGAAIVIDYPGAD-----MPATF 348
Query: 163 RSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGE 222
T L N ++T G+ + + + + GK ++ + + GG+
Sbjct: 349 YGTTKAVLPAGNEKVTVTIGQG--VATETIPLAAGKTVEKDMIVGVGHVVANAYYAAGGD 406
Query: 223 AV--ADTAWSILTA----SG--DTVGESANASPSMVLSEGDYTVIARNKERNYSREFSVL 274
+ + +L A G D V + L DY +IA + F+V
Sbjct: 407 KADGSGIGFKVLKAKKKIDGTRDEVTYAYGPDSKFDLPADDYVLIATVDLAVVEQPFTVK 466
Query: 275 TGKSTIVEVLMRQ 287
G+ +++ M
Sbjct: 467 VGEFQDLKIAMNA 479
>gi|13475442|ref|NP_107006.1| hypothetical protein mlr6511 [Mesorhizobium loti MAFF303099]
gi|14026194|dbj|BAB52792.1| mlr6511 [Mesorhizobium loti MAFF303099]
Length = 537
Score = 69.2 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 22/255 (8%)
Query: 42 EARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVG 101
+A L E V + IF + K V F L G+Y++ A+ G
Sbjct: 220 QAFLKEGGEVPKIDVYYEIFKD--DAKGASGEHVDSGYNVVKFHLAAGNYIVVATSGAAR 277
Query: 102 VVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDD-ELTFSIYSNPNHKALLITD 160
+K+++++ + LNA + +++ PG+ + + +++ + YS +
Sbjct: 278 AEQKVSLTADKATD-LALNLNAAELSIHARPAPGADVDRNAQISIA-YSGGTSDSNY--- 332
Query: 161 KVRSGTL-VRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEM 219
G + + ++T G A + +++ G+++D I K
Sbjct: 333 ----GEVKYVVPAGETKVTVKLGAGEASET--MQLAAGQVVDKDIIVGVGKAKANAFYTQ 386
Query: 220 GGE-AVADTAWSI------LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREFS 272
GGE A D W + L S D V + L GDY + + + + FS
Sbjct: 387 GGEKAETDVGWKVYKAAKKLDGSRDQVTYAYGPDSQFDLPPGDYVIGVDVQAVSTEQPFS 446
Query: 273 VLTGKSTIVEVLMRQ 287
V G+ T V V +
Sbjct: 447 VTVGQVTDVNVTLNA 461
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 7/164 (4%)
Query: 42 EARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVG 101
A T+ ++ V W ++ + + G FDL PGDY+I V
Sbjct: 381 NAFYTQGGEKAETDVGWKVYKAAKKLDGSRDQVTYAYGPDSQFDLPPGDYVIGVDVQAVS 440
Query: 102 VVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDK 161
+ +V+ + V LNAG + + + G I F N + +T
Sbjct: 441 TEQPFSVTVGQVTDVNV-TLNAGVLAVDAPGADGFKI------FEAKKNIQGERKQVTYA 493
Query: 162 VRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQ 205
L +Y + +++ A T V+ G+ ++ ++
Sbjct: 494 YGEKMQTTLAAGDYVLVTNFTTDKADKETPFTVKAGERSELKVE 537
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 24/216 (11%)
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIV 139
G+V + + G+ ++ G + + +++ + K + + G + + Y G
Sbjct: 333 GEVKYVVPAGETKVTVKLGAGEASETMQLAAGQVVDKDIIV-GVGKAKANAFYTQGGEKA 391
Query: 140 DDELTFSIYSNP---NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAI-VSTVVKVE 195
+ ++ + +Y + +T + L +Y I A+ V
Sbjct: 392 ETDVGWKVYKAAKKLDGSRDQVTYAYGPDSQFDLPPGDYVIGV---DVQAVSTEQPFSVT 448
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGE------SANASPSM 249
G++ DV + A + G + I A + GE +
Sbjct: 449 VGQVTDVNVTLNAGVLAVDAPGADG--------FKIFEAKKNIQGERKQVTYAYGEKMQT 500
Query: 250 VLSEGDYTVIAR--NKERNYSREFSVLTGKSTIVEV 283
L+ GDY ++ + + F+V G+ + ++V
Sbjct: 501 TLAAGDYVLVTNFTTDKADKETPFTVKAGERSELKV 536
>gi|163758683|ref|ZP_02165770.1| von Willebrand factor type A domain protein [Hoeflea phototrophica
DFL-43]
gi|162283973|gb|EDQ34257.1| von Willebrand factor type A domain protein [Hoeflea phototrophica
DFL-43]
Length = 587
Score = 62.6 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 78/215 (36%), Gaps = 22/215 (10%)
Query: 81 KVSFDLFPGDYLISASFGHVGVVKK---ITVSSKEKNQKQVFILNAGGIRLYSIYKPGSP 137
F+ PG Y ++A + + + IT+ + +V L+ GG+ LY+
Sbjct: 286 DPEFE--PGAYQVAARY-LNSALLRDAEITIGDDGQQLGEV-NLDGGGVSLYAFAGDDET 341
Query: 138 IVDDELTFSIYS--NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
+ D + + Y + + ++ G + L Y++ + + + +++
Sbjct: 342 LAPDRVLYRFYPVIDGVDATTELDVAIQGGDVTWLPAGTYKVVATHQTISETAR--IEII 399
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTA-----SGDTVGESANA---SP 247
G+I++ T R + V GG+ + I +G G+ A +
Sbjct: 400 AGEIVEYTFDMRFGNLQPVAVMTEGGKRTGHMTYRIYATEEAAIAGGMTGKGVTAGITNA 459
Query: 248 SMVLSEGDYTVIARNK---ERNYSREFSVLTGKST 279
+ L G Y V AR R F V+ +
Sbjct: 460 NFALKAGTYWVWARYSPSAASLVDRLFPVVVTANE 494
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 92/272 (33%), Gaps = 34/272 (12%)
Query: 30 GKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPG 89
G+ +D ++ A ++ T V + + I T I GG V++ L G
Sbjct: 321 GEVNLDGGGVSLYAFAGDDETLAPDRVLYRFYPVIDGVDATTELDVAIQGGDVTW-LPAG 379
Query: 90 DYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS 149
Y + A+ + +I + + E + F + G ++ ++ G +T+ IY+
Sbjct: 380 TYKVVATHQTISETARIEIIAGEIVEY-TFDMRFGNLQPVAVMTEGGKRTGH-MTYRIYA 437
Query: 150 NPNH--KALLITDKVRSGTL---VRLGTNNYQITSHYGKYNAIVSTV----VKVEPGKII 200
+ V +G L Y + + Y A + V V ++
Sbjct: 438 TEEAAIAGGMTGKGVTAGITNANFALKAGTYWVWARYSPSAASL-VDRLFPVVVTANELS 496
Query: 201 DVTIQNRAAKITFKLVSEMGGEAVADTAWSI------------LTASGDTVGESANASPS 248
+ F++ S GE V + + A G A P
Sbjct: 497 SPVFDMNVGVVDFEITSA--GEDV-GVFFVVRILEVNPDGSDGTQAGGSPNRADIAALP- 552
Query: 249 MVLSEGDYTVIARNKER-NYSREFSVLTGKST 279
G Y + R +++ + +F + G++T
Sbjct: 553 ----PGRYRFLRRLRDKRVVTEDFEIFAGQTT 580
>gi|163758555|ref|ZP_02165642.1| von Willebrand factor type A domain protein [Hoeflea phototrophica
DFL-43]
gi|162283845|gb|EDQ34129.1| von Willebrand factor type A domain protein [Hoeflea phototrophica
DFL-43]
Length = 549
Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 21/189 (11%)
Query: 81 KVSFDLFPGDYLISASFGHVGVVKK---ITVSSKEKNQKQVFILNAGGIRLYSIYKPGSP 137
F+ PG Y ++A + + + I V + +V L+ GG+ L +
Sbjct: 252 DPVFE--PGSYPVTARY-FSSALARNAEIVVGQNGQQIGEV-NLDGGGVILSAYAGDDKT 307
Query: 138 IVDDELTFSIY--SNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVE 195
+ D + + + + + I V G + L NY++ + + V +++
Sbjct: 308 LAADSMFYEFFPIVDGAVSSKRINIAVEGGGVTWLPAGNYKVVAKHQSITETV--ELEIV 365
Query: 196 PGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTA-------SGDTV-GESANASP 247
G+ I T R + V GG V A+ + + GD + A
Sbjct: 366 AGETIKHTFDMRFGYLKPSAVMMPGGPTVPSMAFEVYSNRDAANAGGGDNLAFGLLGA-- 423
Query: 248 SMVLSEGDY 256
+ L G Y
Sbjct: 424 KIALKPGAY 432
>gi|260575021|ref|ZP_05843022.1| von Willebrand factor type A [Rhodobacter sp. SW2]
gi|259022643|gb|EEW25938.1| von Willebrand factor type A [Rhodobacter sp. SW2]
Length = 558
Score = 56.1 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 74/236 (31%), Gaps = 16/236 (6%)
Query: 66 NKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGG 125
N + G + + PG Y + S V +T + + + ILNAG
Sbjct: 265 NADGSTGERLTTEYGSIKLNYPPGSYRLLVSLDEARVETDVT-PTADAVARPDVILNAGV 323
Query: 126 IRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYN 185
+ ++ P+ DD I+ + T + + GK
Sbjct: 324 LVIHPRGSADGPVEDDAAV--IFWQGEER----ITTHYGDTSRIVPAGPLDVEVTVGK-- 375
Query: 186 AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVAD-------TAWSILTASGDT 238
A V + V G+ ++V + A + G + A L S +
Sbjct: 376 ASVRQTLTVVAGERLEVDMIAAAGLAAIEGYYAEGTQMEGGDHTVTILAAKQALDGSRER 435
Query: 239 VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNG 294
+ + A L GDY V + F+V G+ V V++ M +
Sbjct: 436 IDTAYGAGSQFTLPPGDYLVRVEQDLASAESAFTVKPGERVDVPVILNAGVMAISA 491
Score = 50.3 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 80/217 (36%), Gaps = 20/217 (9%)
Query: 76 KIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPG 135
G S + G + + G V + +TV + E+ + I AG + Y G
Sbjct: 352 TTHYGDTSRIVPAGPLDVEVTVGKASVRQTLTVVAGERLEVD-MIAAAGLAAIEGYYAEG 410
Query: 136 SPIVDDELTFSIYSNPN---HKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVV 192
+ + + T +I + I +G+ L +Y + + A +
Sbjct: 411 TQMEGGDHTVTILAAKQALDGSRERIDTAYGAGSQFTLPPGDYLV--RVEQDLASAESAF 468
Query: 193 KVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDT------VGESANAS 246
V+PG+ +DV + A + +S G T+ I A + + S +A
Sbjct: 469 TVKPGERVDVPVILNAGVMA---ISAPGA-----TSIEIEGAKKNIEGKRPRLHTSYDAE 520
Query: 247 PSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEV 283
S+V + GDY V+ + SV G+ + V V
Sbjct: 521 LSLVAAAGDYVVLVFRGDVKTEVPVSVKAGERSEVAV 557
>gi|152993598|ref|YP_001359319.1| hypothetical protein SUN_2020 [Sulfurovum sp. NBC37-1]
gi|151425459|dbj|BAF72962.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 940
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 80/234 (34%), Gaps = 24/234 (10%)
Query: 58 W-HIFDSISNKKNTLST-----TKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSK 111
W ++ I N T + L G Y++ +S+ + +
Sbjct: 492 WVRVYHEIHEDDNGKPGDMISGTTSYKKKPGTVQLPVGKYILKSSYNKFKKITPFEIKPG 551
Query: 112 EKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKV-----RSGT 166
E + V + G + + K G + ++ IY + N K + G
Sbjct: 552 EVTKVHVIMGQTGTVETSASEKEGGKWI--QVYHGIYEDDNGKPGESISSATSYKKKPGK 609
Query: 167 LVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVAD 226
+L Y + S Y +++ ++E GK V + I K + A
Sbjct: 610 A-QLPVGKYILKSSYNRFDKFTP--FEIEAGKTTKVHVLFGKFMIGAKC-----ADMNAK 661
Query: 227 TAWSILTASGDTVGES---ANASPSMVLSEGDYTVIARNKERNYSREFSVLTGK 277
++ + G V + + + ++L +G+Y V A + EF+V GK
Sbjct: 662 VSYEVYANDGRLVDDKKLNCSDTWEVILDDGNYRVEAAIDAGSGEAEFTVGNGK 715
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 85/246 (34%), Gaps = 25/246 (10%)
Query: 58 W-HIFDSISNKKNTLST-----TKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSK 111
W ++ I N T + L G Y++ +S+ + +
Sbjct: 406 WVRVYHEIHEDDNGKPGDMISGTTSYKKKPGTVQLPVGKYILKSSYNKFKKITPFEIKPG 465
Query: 112 EKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKV-----RSGT 166
E + V + G + + K V + I+ + N K + + GT
Sbjct: 466 EVTKVHVIMGQTGTVETSASEKENGKWV--RVYHEIHEDDNGKPGDMISGTTSYKKKPGT 523
Query: 167 LVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDV-TIQNRAAKITFKLVSEMGGEAVA 225
V+L Y + S Y K+ I +++PG++ V I + + + GG+ +
Sbjct: 524 -VQLPVGKYILKSSYNKFKKITP--FEIKPGEVTKVHVIMGQTGTVETSASEKEGGKWI- 579
Query: 226 DTAWSILTASGDTVGESANASPSM-------VLSEGDYTVIARNKERNYSREFSVLTGKS 278
I GES +++ S L G Y + + + F + GK+
Sbjct: 580 QVYHGIYEDDNGKPGESISSATSYKKKPGKAQLPVGKYILKSSYNRFDKFTPFEIEAGKT 639
Query: 279 TIVEVL 284
T V VL
Sbjct: 640 TKVHVL 645
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 75/216 (34%), Gaps = 19/216 (8%)
Query: 85 DLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELT 144
L G Y+ +S+ V + + V G + + K V +
Sbjct: 353 RLPVGKYVAKSSYSKFKKETPFEVKADSVVKVPVVFSQTGTVETSASEKENGKWV--RVY 410
Query: 145 FSIYSNPNHKALLITDKV-----RSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKI 199
I+ + N K + + GT V+L Y + S Y K+ I +++PG++
Sbjct: 411 HEIHEDDNGKPGDMISGTTSYKKKPGT-VQLPVGKYILKSSYNKFKKITP--FEIKPGEV 467
Query: 200 IDV-TIQNRAAKITFKLVSEMGGEAVADTAWSILTAS----GDTVGESAN--ASPSMV-L 251
V I + + + G+ V I GD + + + P V L
Sbjct: 468 TKVHVIMGQTGTVETSASEKENGKWV-RVYHEIHEDDNGKPGDMISGTTSYKKKPGTVQL 526
Query: 252 SEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQ 287
G Y + + + F + G+ T V V+M Q
Sbjct: 527 PVGKYILKSSYNKFKKITPFEIKPGEVTKVHVIMGQ 562
>gi|159185429|ref|NP_353816.2| hypothetical protein Atu8136 [Agrobacterium tumefaciens str. C58]
gi|159140677|gb|AAK86601.2| hypothetical protein Atu8136 [Agrobacterium tumefaciens str. C58]
Length = 366
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 88/270 (32%), Gaps = 32/270 (11%)
Query: 28 GKGKRVVDAQRITCEARLTENSTSI--DSGVSWHIF-DSISNKKNTLSTTKKIIGGK--V 82
+ + +A L + S+ V W + + + T+ GG
Sbjct: 28 SQEPAPTPQYNVVTDAVLFDGGPSLGNSDKVRWDFYKADRTGAR-----TETNAGGSYDA 82
Query: 83 SFD--LFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKPGSPIV 139
+F+ L G Y+ A+ G V + + + +A + + G +
Sbjct: 83 TFEAKLPAGRYVGVAALG--NVTRDVPFEVKDGSIARPKVNFDAAELTVVPKRSAGGEV- 139
Query: 140 DDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKI 199
+ + I D V V + +T G A + ++ G+
Sbjct: 140 ETQAKTEITKGD------FKDSVYGQNTVFVPAGEIVLTGSIGPARA--QETLAIKAGEK 191
Query: 200 IDVTIQNRAAKITFKLVSEMGGEAV--------ADTAWSILTASGDTVGESANASPSMVL 251
I + + + K V GG+AV A +A L + T+ M +
Sbjct: 192 ISHELVIPSGVVVAKAVYAQGGKAVETDDIRFEAMSAKETLDGTRQTISGVYGTGKMMEM 251
Query: 252 SEGDYTVIARNKERNYSREFSVLTGKSTIV 281
GD+ + AR + + F+V G+ + +
Sbjct: 252 PAGDFVMRARLGKVTAEQPFTVTAGQRSEI 281
Score = 39.1 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 66/179 (36%), Gaps = 14/179 (7%)
Query: 31 KRVVDAQRITCEARLTENSTSI-DSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPG 89
+ V+ + + +A + ++ + + + T T + G ++ G
Sbjct: 195 ELVIPSGVVVAKAVYAQGGKAVETDDIRFEAMSAKETLDGTRQTISGVYGTGKMMEMPAG 254
Query: 90 DYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS 149
D+++ A G V + TV++ ++++ L+AG + + + IV+
Sbjct: 255 DFVMRARLGKVTAEQPFTVTAGQRSE-ITLNLDAGVLAITAPGAERIDIVETT------K 307
Query: 150 NPNHKALLITDKVRSGTLVRLGTNNYQITSHY----GKYNAIVSTVVKVEPGKIIDVTI 204
+ I+ + + L +Y + Y G+ ++ V+ + + T+
Sbjct: 308 DLQGTQKEISGRYGTKHQETLHPGDYSVKVSYDKKSGRDPKEITA--TVKAAERTETTV 364
>gi|320353548|ref|YP_004194887.1| YD repeat-containing protein [Desulfobulbus propionicus DSM 2032]
gi|320122050|gb|ADW17596.1| YD repeat protein [Desulfobulbus propionicus DSM 2032]
Length = 2259
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 74/202 (36%), Gaps = 14/202 (6%)
Query: 73 TTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY 132
T G + + L Y + A + + + +SS N ++ G R+ +
Sbjct: 1576 TVATGTDGTLQWSLPAQAYAVQARY-----LGRTYLSSTFTNDDPTVLIPEGLARVTLLQ 1630
Query: 133 KPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVV 192
+ L S S+P+H LIT+ RL +Y + G+ + +
Sbjct: 1631 GGTALANTQVLAIS-ESDPDHPKSLITNDSGVAE-FRLPAGSYTFKATLGET--VYQGIG 1686
Query: 193 KVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANAS----PS 248
V +I +VT+ + ++ V + S+ TA G+ + SA S
Sbjct: 1687 TVVADQITNVTLNLGTSTLSIT-VRTNETTVLPGVVCSLYTAEGEPLNRSATTDGSGVAS 1745
Query: 249 MVLSEGDYTVIARNKERNYSRE 270
+ G Y V A + +++ E
Sbjct: 1746 FAVEAGTYRVKAWHLGYDFTSE 1767
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 17/205 (8%)
Query: 75 KKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKP 134
G+ F + Y I A++ S + + I+ AGG + +
Sbjct: 1335 STNTQGEAIFSVPQKPYRIKATY-LAQ-----EYWSADVTWENAPIVIAGGKAVVNTTNN 1388
Query: 135 GSPIVDDELTFSIYSNPNHKALLIT-DKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK 193
G P+ L +Y+ + T L +Y+ + + + S +
Sbjct: 1389 GMPLAGATLR--VYTATGTDTGITALTDSEGKTTFTLPGGSYRFQATH-EGQLFWSGNLT 1445
Query: 194 VEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPS----M 249
V P + I TI + + G +A + +ASG + +S S +
Sbjct: 1446 VTPDQTIHTTISTGGGSYVLNVTNGTAG--IAGVKTMLFSASGSYLSQSVTTSSTGEAAY 1503
Query: 250 VLSEGDYTVIARNKERNYSRE-FSV 273
L++G Y V A YS + F+V
Sbjct: 1504 NLADGSYRVTANYLGYEYSTDPFTV 1528
>gi|290956267|ref|YP_003487449.1| efflux protein [Streptomyces scabiei 87.22]
gi|260645793|emb|CBG68884.1| putative efflux protein [Streptomyces scabiei 87.22]
Length = 784
Score = 48.0 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 18/183 (9%)
Query: 88 PGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY--KPGSPIVDDELT 144
PG Y LI+A+ GH +TV +V I+ G RL G + + +T
Sbjct: 583 PGAYVLIAAAGGHRPQAVSVTVGEGPV---EVDIVLGGAGRLAGTVRTADGRAVGEATVT 639
Query: 145 FSIYSNPNHKALLITDKVRSGT--LVRLGTNNYQI-TSHYGKYNAIVSTVVKVEPGKIID 201
+ + + ++ T + G + L +Y + S + A + V V +
Sbjct: 640 LT---DARGEVVVTTRSGQQGDYLVTELAAGDYILAVSAHSHRPAALP--VTVRAARETR 694
Query: 202 VTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYT 257
+ ++ + V G V D ++L A+GD VG L+ G+YT
Sbjct: 695 LDVELAGGAVLLGTVRAGSGRPVEDARVTLLDAAGDVVGTITTGVDGTFRFADLAAGEYT 754
Query: 258 VIA 260
VIA
Sbjct: 755 VIA 757
>gi|288869763|ref|ZP_05976169.2| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374]
gi|288860507|gb|EFC92805.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374]
Length = 1075
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY-KPGSPI 138
++ +L+PGDY+I+ +G V +TV + G G P+
Sbjct: 963 ATLNINLYPGDYIITTMYGKYAVGNNVTVLPTLITKDLDMKFQDGSNFTAKTLDGQGKPL 1022
Query: 139 VDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
+ +TF++ Y+ + + + L+RL Y ITS + +Y
Sbjct: 1023 ANQNITFNVNGVFYNRTTDENGM------ANLLIRLNPGKYIITSIWNEY 1066
>gi|297156232|gb|ADI05944.1| transmembrane efflux protein [Streptomyces bingchenggensis BCW-1]
Length = 820
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 20/184 (10%)
Query: 88 PGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFS 146
G Y LI+A+ GH +TV V + AG RL + + T +
Sbjct: 618 AGSYILIAAAGGHQPRAVSVTVG-DRPVDLDVVLGGAG--RLAGTVRTADGAPVRDATVT 674
Query: 147 IYSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAIVST--VVKVEPGKII 200
+ + + ++ + L Y + S A V V+ +
Sbjct: 675 L---TDVRGEVVATTRSGLDGSYVIAELVAGEYTLAS---SAPAFRPAALPVTVQAARET 728
Query: 201 DVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDY 256
I+ + +V GG V D ++L A+G+ V S A + LS G+Y
Sbjct: 729 RQDIELAGGAVLRGVVRAGGGRLVEDARVTLLDAAGNVVDTSTTTADGAFRFVDLSAGEY 788
Query: 257 TVIA 260
TVIA
Sbjct: 789 TVIA 792
>gi|325292177|ref|YP_004278041.1| hypothetical protein AGROH133_04469 [Agrobacterium sp. H13-3]
gi|325060030|gb|ADY63721.1| hypothetical protein AGROH133_04469 [Agrobacterium sp. H13-3]
Length = 366
Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 89/268 (33%), Gaps = 26/268 (9%)
Query: 29 KGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGK--VSFD- 85
+ + +A L + S+ G S + + GG +F+
Sbjct: 29 GAQEPAPLYNVVTDAVLFDGGPSL--GNSDRVRWDFYKADGAGVRSDVNAGGSYDATFEA 86
Query: 86 -LFPGDYLISASFGHVGVVKKITVS-SKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDEL 143
L G Y+ A+ G + ++I + + +A + + PG + + +
Sbjct: 87 KLPAGKYVGVAALG--NIRREIPFEVKEGSLTRPKANFDAAELTVVPKRSPGGDV-ESQA 143
Query: 144 TFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVT 203
I + D V + +T G A + ++ G+ I
Sbjct: 144 KTEITKDD------FKDSVYGQNTTFVPAGELLLTGSIGPARA--QETLAIKAGETISHD 195
Query: 204 IQNRAAKITFKLVSEMGGEAV--------ADTAWSILTASGDTVGESANASPSMVLSEGD 255
+ + + K GG+AV A +A L + T+ +M + GD
Sbjct: 196 LVIPSGVVVAKAAYTDGGKAVETDDIRFEALSAKETLDGTRQTINGVYGTGKTMEMPAGD 255
Query: 256 YTVIARNKERNYSREFSVLTGKSTIVEV 283
+ + AR + + F+V GK T + +
Sbjct: 256 FVMRARLGKVTVEQPFTVTAGKRTEINL 283
>gi|148642111|ref|YP_001272624.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148551128|gb|ABQ86256.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 1022
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY-KPGSPI 138
++ +L+PGDY+I+ +G V +TV + G G P+
Sbjct: 910 ATLNINLYPGDYIITTMYGKYAVGNNVTVLPTLITKDLDMKFQDGSNFTAKTLDGQGKPL 969
Query: 139 VDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
+ +TF++ Y+ + + + L+RL Y ITS + +Y
Sbjct: 970 ANQNITFNVNGVFYNRTTDENGM------ANLLIRLNPGKYIITSIWNEY 1013
>gi|318059716|ref|ZP_07978439.1| transmembrane efflux protein [Streptomyces sp. SA3_actG]
Length = 823
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 26/186 (13%)
Query: 89 GDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY--KPGSPIVDDELTF 145
G Y LI+A+ GH + +TV+ E+ + +L G RL G+P+ +T
Sbjct: 622 GSYVLIAAAGGH--QPQAVTVTVAERPVELDVVLGGAG-RLAGRVVTADGTPVAGASVTL 678
Query: 146 S-------IYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGK 198
+ ++ H + D + +G + + + V+ +
Sbjct: 679 TDVRGEVVAHARSEHDGAYVLDDLVAGE---------YTLAASATAFRPAALPLTVQAAR 729
Query: 199 IIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV----GESANASPSMVLSEG 254
I+ + V GG V D ++L A+G+ V E+ + + LS G
Sbjct: 730 ETRQDIELAGGAVLRGTVRARGGRPVEDARVTLLDAAGNVVDSLTTEADGSFRFVDLSSG 789
Query: 255 DYTVIA 260
+YTVIA
Sbjct: 790 EYTVIA 795
>gi|320007503|gb|ADW02353.1| drug resistance transporter, EmrB/QacA subfamily [Streptomyces
flavogriseus ATCC 33331]
Length = 818
Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 75/199 (37%), Gaps = 25/199 (12%)
Query: 77 IIGGKVSFDLFP---GDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY- 132
G + L G Y++ A+ G + ++V+ E+ + +L G RL
Sbjct: 602 ASGADGRYALSAPGTGSYVLIAAAG-GHQPQAVSVTVGERPVELDVVLGGAG-RLAGAVL 659
Query: 133 -KPGSPIVDDELTFSIYSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAI 187
G+P+ D +T + + + ++ + L Y + + A
Sbjct: 660 TPDGAPVRDAAVTLT-----DVRGDVVATTRTGREGAYVISELVAGEYTLAA---SAPAF 711
Query: 188 VST--VVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGE---- 241
V V+ + I+ + +V GG AV D ++L A+G+ V
Sbjct: 712 RPAALPVSVQAARETRQDIELAGGAVLRGIVRAPGGRAVEDARVTLLDAAGNVVDTLTTG 771
Query: 242 SANASPSMVLSEGDYTVIA 260
S A + LS G+YTVIA
Sbjct: 772 SDGAFRFVDLSTGEYTVIA 790
>gi|115375660|ref|ZP_01462915.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310821170|ref|YP_003953528.1| hypothetical protein STAUR_3913 [Stigmatella aurantiaca DW4/3-1]
gi|115367308|gb|EAU66288.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309394242|gb|ADO71701.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 868
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 5/162 (3%)
Query: 17 TSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKK 76
+ L N S + V I+ ++ + SI +GVS ++ +
Sbjct: 380 VTPLPNQTFSGNTTQDFVLGSVISLSGQVKFSDGSIAAGVS--VYAKEPSSPTATYQATT 437
Query: 77 IIGGKVSFDLFPGDYLISASFGHVGVV-KKITVSSKEKNQKQVFILNAGGIRLYSIY--K 133
G S L PG Y + F K + S+ + L A I+L
Sbjct: 438 DAAGMYSLQLIPGTYSVGIEFASPSFTGSKTLLFSQPFSTPSTLNLTAQDIQLNGRVVNS 497
Query: 134 PGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNY 175
G P+ + L S+Y + AL VR+ Y
Sbjct: 498 SGQPVANVRLWGSMYRDNGWNALSPLSGADGRFQVRMFPGTY 539
>gi|307330324|ref|ZP_07609470.1| drug resistance transporter, EmrB/QacA subfamily [Streptomyces
violaceusniger Tu 4113]
gi|306884020|gb|EFN15060.1| drug resistance transporter, EmrB/QacA subfamily [Streptomyces
violaceusniger Tu 4113]
Length = 849
Score = 45.3 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 24/186 (12%)
Query: 88 PGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY--KPGSPIVDDELT 144
G Y LI+A+ GH +TV V + AG RL G+P+ + +T
Sbjct: 647 AGSYVLIAAAGGHQPRAVSVTVG-DRPVDLDVVLGGAG--RLAGAVLTADGTPVREATVT 703
Query: 145 FSIYSNPNHKALLIT---DKVRSGTLVR-LGTNNYQITSHYGKYNAIVST--VVKVEPGK 198
+ + + ++ G ++ L Y + + A + V+ +
Sbjct: 704 LT-----DVRGEVVAATRSGREGGYVMEELVAGEYTLAA---SAPAFRPAALPITVQAAR 755
Query: 199 IIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEG 254
I+ + +V GG V D ++L A+G+ V + A + LS G
Sbjct: 756 ETRQDIELAGGAVLRGVVRATGGRVVEDARVTLLDAAGNVVDTATTGPDGAFRFIDLSAG 815
Query: 255 DYTVIA 260
+YTVIA
Sbjct: 816 EYTVIA 821
>gi|295835657|ref|ZP_06822590.1| drug transporter [Streptomyces sp. SPB74]
gi|295825621|gb|EFG64362.1| drug transporter [Streptomyces sp. SPB74]
Length = 818
Score = 44.9 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 74/209 (35%), Gaps = 36/209 (17%)
Query: 66 NKKNTLSTTKKIIGGKVSFDLFPGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAG 124
+ + G Y LI+A+ GH + +TV+ E+ + +L
Sbjct: 604 GEDGRYAL------ATPGI----GSYVLIAAAGGH--QPQAVTVTVAERPVELDVVLGGA 651
Query: 125 GIRLYSIY--KPGSPIVDDELTFS-------IYSNPNHKALLITDKVRSGTLVRLGTNNY 175
G RL G+P+ +T + ++ H + D + +G
Sbjct: 652 G-RLAGRVMTADGTPVAGASVTLTDVRGEVVAHARSEHDGAYVLDDLVAGE--------- 701
Query: 176 QITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTAS 235
+ + + V+ + ++ + V GG V D ++L A+
Sbjct: 702 YTLAASATAFRPAALPLSVQAARETRQDVELAGGAVLRGTVRARGGRPVEDARVTLLDAA 761
Query: 236 GDTV----GESANASPSMVLSEGDYTVIA 260
G+ V E+ + + LS G+YTVIA
Sbjct: 762 GNVVDSLTTEADGSFRFVDLSSGEYTVIA 790
>gi|331694036|ref|YP_004330275.1| EmrB/QacA subfamily drug resistance transporter [Pseudonocardia
dioxanivorans CB1190]
gi|326948725|gb|AEA22422.1| drug resistance transporter, EmrB/QacA subfamily [Pseudonocardia
dioxanivorans CB1190]
Length = 962
Score = 44.9 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 84/233 (36%), Gaps = 22/233 (9%)
Query: 47 ENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFP------------GDYLIS 94
+ +I+ GV + + T + G + + G YL+
Sbjct: 662 SDGPAIE-GVVRR--ADGAGLPGAVVTVTEPTGRQAARTTSDQQGEYRIGVPTGGTYLVV 718
Query: 95 ASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY--KPGSPIVDDELTFS-IYSNP 151
A+ G + + + V + AGG+R G + + I
Sbjct: 719 AASGAFQPHAAMVAVADRAVRHDVTLAGAGGLRGTVRVTDAQGQVRPASGVAVTLIDVQG 778
Query: 152 NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKI 211
N A ++D++ L + Y +T+ Y + ++VV +++ R A++
Sbjct: 779 NVSAATVSDELGRYVLAGVPDGQYTLTAAGAGYQPVATSVVLPGGSEVVQDVELPRRARL 838
Query: 212 TFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYTVIA 260
+V+ G V + +++ SG+ VG + A L+EG YT+ A
Sbjct: 839 LGTVVAGSTGRGVPEALATLIDPSGNVVGSTVTDADGAFAFDDLAEGTYTITA 891
>gi|52079042|ref|YP_077833.1| cell wall anchor domain-containing protein [Bacillus licheniformis
ATCC 14580]
gi|52784414|ref|YP_090243.1| hypothetical protein BLi00601 [Bacillus licheniformis ATCC 14580]
gi|52002253|gb|AAU22195.1| LPXTG-motif containing, cell wall anchor domain protein [Bacillus
licheniformis ATCC 14580]
gi|52346916|gb|AAU39550.1| hypothetical protein BLi00601 [Bacillus licheniformis ATCC 14580]
Length = 1975
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 91/281 (32%), Gaps = 40/281 (14%)
Query: 54 SGVSWHIFD--SISNKKNTLSTTKKIIGGKVSFDLFPGDY-LI--SASFGHVGVVKKI-- 106
+G+ +F K K G + DL PG Y + A G++ I
Sbjct: 1618 NGLEGAVFKIIDSEGKTVKDDLISKEGGKIEAGDLAPGSYQFVEKHAPDGYLLSTDPIPF 1677
Query: 107 TVSSKEKNQKQVFILNA----GGIRLYSIYKPGSPIVDDELTFSIYSNPNH--KALLITD 160
+++ K + + + L A + L + + F + K L TD
Sbjct: 1678 SITGKHEGEPKQVKLTALNKKNSVVLTKVGQDDKSAGLQGAQFDLTDETGKVLKTGLATD 1737
Query: 161 KVRSGTLVRLGTNNYQITS-----HYGKYNAIVSTVVKVEPGKIIDVTIQNR--AAKITF 213
T+ L NYQ HY +S VK K I++T +N+ +
Sbjct: 1738 ADGRITVYGLKPGNYQFVETKAPKHYQLDKTPISFTVKNTDTKQIELTAENQLTPGDVKL 1797
Query: 214 KLVSEMGGEA-VADTAWSILTASGDTVG--------------ESANASPSMVLSEGDYTV 258
V +A + + +L A G V + + L+ G Y
Sbjct: 1798 TKVDSNNKKAVLKGAEFKLLDADGKPVKAGGNSKKLPAVWTTDQNGQFTAEGLAPGRYQF 1857
Query: 259 IARNKERNYSRE-----FSVLTGKSTIVEVLMRQKRMDKNG 294
+ Y + F + G++ VEV+ +++
Sbjct: 1858 VETKAPDGYKLDETPIPFEIKKGQTKPVEVIASNEKLKTPA 1898
>gi|319648654|ref|ZP_08002865.1| hypothetical protein HMPREF1012_03904 [Bacillus sp. BT1B_CT2]
gi|317389073|gb|EFV69889.1| hypothetical protein HMPREF1012_03904 [Bacillus sp. BT1B_CT2]
Length = 1975
Score = 44.5 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 91/281 (32%), Gaps = 40/281 (14%)
Query: 54 SGVSWHIFD--SISNKKNTLSTTKKIIGGKVSFDLFPGDY-LI--SASFGHVGVVKKI-- 106
+G+ +F K K G + DL PG Y + A G++ I
Sbjct: 1618 NGLEGAVFKIIDSEGKTVKDDLISKEGGKIEAGDLAPGSYQFVEKHAPDGYLLSTDPIPF 1677
Query: 107 TVSSKEKNQKQVFILNA----GGIRLYSIYKPGSPIVDDELTFSIYSNPNH--KALLITD 160
+++ K + + + L A + L + + F + K L TD
Sbjct: 1678 SITGKHEGEPKQVKLTALNKKNSVVLTKVGQDDKSAGLQGAQFDLTDETGKVLKTGLATD 1737
Query: 161 KVRSGTLVRLGTNNYQITS-----HYGKYNAIVSTVVKVEPGKIIDVTIQNR--AAKITF 213
T+ L NYQ HY +S VK K I++T +N+ +
Sbjct: 1738 ADGRITVYGLKPGNYQFVETKAPKHYQLDKTPISFTVKNTDTKQIELTAENQLTPGDVKL 1797
Query: 214 KLVSEMGGEA-VADTAWSILTASGDTVG--------------ESANASPSMVLSEGDYTV 258
V +A + + +L A G V + + L+ G Y
Sbjct: 1798 TKVDSNNKKAVLKGAEFKLLDADGKPVKAGGNSKKLPAVWTTDQNGQFTAEGLAPGRYQF 1857
Query: 259 IARNKERNYSRE-----FSVLTGKSTIVEVLMRQKRMDKNG 294
+ Y + F + G++ VEV+ +++
Sbjct: 1858 VETKAPDGYKLDETPIPFEIKKGQTKPVEVIASNEKLKTPA 1898
>gi|148643457|ref|YP_001273970.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148552474|gb|ABQ87602.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 1370
Score = 44.1 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 22/198 (11%)
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLY--SIYKPGSP 137
+ +L PG Y+I+A + + V ITV + G + ++ G+P
Sbjct: 735 ATQNINLLPGKYIITAIYNNCFVSNNITVLPNMDQNTDLVKYYKNGTQYNVRALDGQGNP 794
Query: 138 IVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVK 193
+ + E+TF+I Y+ + + T + L Y IT+ Y N VS +
Sbjct: 795 LANQEITFNINGVFYTKTTNDKGIATLNIN------LHPGKYIITAIYN--NCFVSNNIT 846
Query: 194 VEPGKIIDVTIQNRAAKITF--KLVSEMGGEAVADTAWSILTASG---DTVGESAN-ASP 247
V P D + + KLV + G +A+ + +G + + + A
Sbjct: 847 VLPVLTADDLTKYFGIPASLNSKLV-DGQGNPLANQTVT-YNINGVFYNKITDVNGIAKL 904
Query: 248 SMVLSEGDYTVIARNKER 265
++ L+ G+Y ++
Sbjct: 905 NINLNPGEYIATITHEST 922
>gi|229822587|ref|YP_002884113.1| LPXTG-motif cell wall anchor domain protein [Beutenbergia cavernae
DSM 12333]
gi|229568500|gb|ACQ82351.1| LPXTG-motif cell wall anchor domain protein [Beutenbergia cavernae
DSM 12333]
Length = 753
Score = 43.4 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 27 KGKGKRVVDAQRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSF-D 85
G V + +T + + V +I+ T TT G SF D
Sbjct: 413 PSTGNDFVVQAPASVSGTVTAGGSGVPGAVV-----TITGPGGTF-TTPTAADGTYSFGD 466
Query: 86 LFPGDYLIS--ASFGHVG---VVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVD 140
L PGDY ++ FG+ +++TV +++ + G + G+PI
Sbjct: 467 LPPGDYTVTLEVPFGYTADGPTEQQVTVETEDVTDVDFAVQKPGAVGGTVTDDEGNPIAG 526
Query: 141 DELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKII 200
+T S P+ L TD S L +L Y IT G +
Sbjct: 527 ATVTVS---GPDGDVALTTDDAGSYFLDQLPQGEYTITLTVPDG----------YTGDVT 573
Query: 201 DVTIQNRAA 209
++T AA
Sbjct: 574 ELTTTITAA 582
>gi|163788447|ref|ZP_02182893.1| CHU large protein; gliding motility-related protein; possible adhesin
AidA-related [Flavobacteriales bacterium ALC-1]
gi|159876767|gb|EDP70825.1| CHU large protein; gliding motility-related protein; possible adhesin
AidA-related [Flavobacteriales bacterium ALC-1]
Length = 2741
Score = 43.4 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 78/216 (36%), Gaps = 37/216 (17%)
Query: 71 LSTTKKIIGGKVSF--DLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA----- 123
L T+ + DL PG Y ++ + G + I + E + ++ A
Sbjct: 2120 LPTSSTSGPQTSNVFSDLGPGTYTVTITDGFDCELTSIDIVISEPTPIEASLVRATSQTC 2179
Query: 124 ---GGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH 180
+ L + G+ D +FS I + T + Y S+
Sbjct: 2180 LVESTLTLSATGGTGTYAYSDNPSFS----------TILGTFSASTTFSVSDGTY---SY 2226
Query: 181 Y-GKYN---AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGG--EAVA-----DTAW 229
Y N A VS + ++P + D+T+ A+ IT + G A+A + +
Sbjct: 2227 YVRDANGCVANVSNEITIDP--LPDLTLTLEASNITINCAGDNNGSISAIAQGGLGNYVY 2284
Query: 230 SILTASGDTVGESANASPSMV-LSEGDYTVIARNKE 264
++ SG TV + N + L G Y V+ + +
Sbjct: 2285 TLQDGSGSTVTATQNTPGNFTELYAGTYVVVVESGD 2320
>gi|160934746|ref|ZP_02082132.1| hypothetical protein CLOLEP_03621 [Clostridium leptum DSM 753]
gi|156866199|gb|EDO59571.1| hypothetical protein CLOLEP_03621 [Clostridium leptum DSM 753]
Length = 4098
Score = 43.0 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 84/255 (32%), Gaps = 44/255 (17%)
Query: 3 ISFSSYAKAENMHTTS---TLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWH 59
+++ + + TS L ++ +++ ++T + TE+ + +G +
Sbjct: 715 DTYAIMQRDTRVQITSNHTEALQIENAQRGALQIIKYGQLTLGSVATESRVPL-AGAVFG 773
Query: 60 IFDS------ISNKKNTLSTTKKIIGG----KVSFDLFPGDYLISASFGHVGVVKKITVS 109
++ + + + G + L PG Y + G + T+
Sbjct: 774 VYTDPDCKTLAKDSNGNDARVTTRVSGNEPDTPAITLDPGTYYVQEISAPSGYQRDDTIH 833
Query: 110 SKEKNQKQVFILNA-------GGIRLYSIYKPGSPIVDDELTFSIYSNPNHK-----ALL 157
+ QK+ F L A G +++ I F +Y+ + +
Sbjct: 834 TVVIEQKKTFELTADNLVDRQGQLKIEKQSDKTGDIDLSGAVFEVYAADDTDFTEPLDRI 893
Query: 158 ITDKVRSGTLVRLGTNNY----------QITSHY------GKYNAIVSTV-VKVEPGKII 200
TD+ G L + +Y IT G A+ ++V ++
Sbjct: 894 TTDENGEGYSKFLPSGSYILREVQSIAGHITPSEPFKGVDGSNVAVTDGDGIRVANNQLT 953
Query: 201 DVTIQNRAAKITFKL 215
V ++N +T +L
Sbjct: 954 TVIVKNE-PYVTIRL 967
>gi|310822003|ref|YP_003954361.1| hypothetical protein STAUR_4755 [Stigmatella aurantiaca DW4/3-1]
gi|309395075|gb|ADO72534.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 990
Score = 43.0 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 22/231 (9%)
Query: 40 TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFD-LFPGDYLISASFG 98
T E R+T + + V + L+ + G F LFP + +++A G
Sbjct: 262 TLEVRVTRDGAPAAATV--RLKAD------HLARQARAEGAPARFTGLFPDEVVVTAEAG 313
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKP-GSPIVDDELTFSIYSNPNHKALL 157
+G V +I V+ E + L G ++ G P+ E+T +K +
Sbjct: 314 SLGSVPRI-VTLDEAVTQVTLELEEAGRLFVTVVDEAGEPVPQPEVTLR-----TNKGEV 367
Query: 158 IT-DKVRSGTLVRLGT---NNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
I +KV++G LV LG +Y + H + V +V+ G+ + ++ A +
Sbjct: 368 IRHEKVQTGALVELGPLGVGDYTLVGH-AEGFRDVELPARVKAGE-TSLELEMARATLIS 425
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKE 264
V + G + + + ++ + V + G Y + A + E
Sbjct: 426 GQVMDEYGRPAPGVSVLVQPTGDAVLADADGHFSAQVPTPGLYELHAHHSE 476
Score = 40.3 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 10/205 (4%)
Query: 88 PGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSI 147
PG Y + A G ++ V++ N + A + + ++ G + ++ I
Sbjct: 465 PGLYELHAHHSEWGGG-RLKVTAPASNVRLELE-PAAAMEI-TVSAEGRRVEGADVVLWI 521
Query: 148 YSNP--NHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQ 205
S D V + L T +Y + + + Y V VE G+ + +T +
Sbjct: 522 ESQGIFRSDRPSGPDGVVP--MRGLPTGSYWMVASHPDYQPSDRQQVNVEDGQTLKLTAE 579
Query: 206 NRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG-ESANASPSMVLSEGD-YTVIARNK 263
R V + G V+ ++ + ++ L Y + AR+
Sbjct: 580 LRPGATLSGDVVDDQGAPVSGATLVVMPRGAEPAASDARGHFEIRALKPDRTYRLEARHP 639
Query: 264 ERNYSREFSVLTGKSTIVEVLMRQK 288
+ G V+V+++++
Sbjct: 640 GYDQEAPVDGRPGGD-PVKVVLKRR 663
>gi|254251539|ref|ZP_04944857.1| hypothetical protein BDAG_00728 [Burkholderia dolosa AUO158]
gi|124894148|gb|EAY68028.1| hypothetical protein BDAG_00728 [Burkholderia dolosa AUO158]
Length = 155
Score = 43.0 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 36/114 (31%), Gaps = 10/114 (8%)
Query: 15 HTTSTLLNNNISKGKGKRVVDAQRITCEA-----RLTENSTSIDSGVSWHIFDSISNKKN 69
T + +S G GK A A R T + V I ++
Sbjct: 46 DATQQGDVSFVSGGIGKDQSTAFERNESAWPLALRFTGKGGEYLADVHVRI----VDRNG 101
Query: 70 TLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA 123
G + L PG Y + AS+ + +TV +K K F NA
Sbjct: 102 AEVLKTDARGPYMLVKLPPGRYTVHASYQGSDETRAVTVGAKGGT-KAAFQWNA 154
>gi|6898|emb|CAA33463.1| twitchin [Caenorhabditis elegans]
Length = 6048
Score = 42.6 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 147 IYSNPNHKALLITDKVRSGTLV-------RLGTNNYQITSH--YGKYNAIVSTVVKVEPG 197
I+ N + ++ V G +V R Y+I++ YGK ++ V PG
Sbjct: 3770 IFEN---ERTVV--DVNPGEIVITTTGSKRSDAGPYKISATNKYGKDTCKLNVFVLDAPG 3824
Query: 198 KII---DVT-IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
K T IQ A ++++ + GG+A+ + T GD + L
Sbjct: 3825 KPTGPIRATDIQADAMTLSWRPPKDNGGDAITNYVVEKRTPGGD--WVTVGHPVGTTL-- 3880
Query: 254 GDYTVIARNKERNYSREFSVLT 275
RN + N EF V
Sbjct: 3881 -----RVRNLDANTPYEFRVRA 3897
>gi|313004686|emb|CBK19522.1| C. elegans protein ZK617.1d, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|313004688|emb|CBK19524.1| C. elegans protein ZK617.1d, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 6992
Score = 42.6 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 147 IYSNPNHKALLITDKVRSGTLV-------RLGTNNYQITSH--YGKYNAIVSTVVKVEPG 197
I+ N + ++ V G +V R Y+I++ YGK ++ V PG
Sbjct: 4714 IFEN---ERTVV--DVNPGEIVITTTGSKRSDAGPYKISATNKYGKDTCKLNVFVLDAPG 4768
Query: 198 KII---DVT-IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
K T IQ A ++++ + GG+A+ + T GD + L
Sbjct: 4769 KPTGPIRATDIQADAMTLSWRPPKDNGGDAITNYVVEKRTPGGD--WVTVGHPVGTTL-- 4824
Query: 254 GDYTVIARNKERNYSREFSVLT 275
RN + N EF V
Sbjct: 4825 -----RVRNLDANTPYEFRVRA 4841
>gi|32565886|ref|NP_502273.2| UNCoordinated family member (unc-22) [Caenorhabditis elegans]
gi|26985878|emb|CAA98064.2| C. elegans protein ZK617.1a, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|26985880|emb|CAA98081.2| C. elegans protein ZK617.1a, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 6839
Score = 42.6 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 147 IYSNPNHKALLITDKVRSGTLV-------RLGTNNYQITSH--YGKYNAIVSTVVKVEPG 197
I+ N + ++ V G +V R Y+I++ YGK ++ V PG
Sbjct: 4561 IFEN---ERTVV--DVNPGEIVITTTGSKRSDAGPYKISATNKYGKDTCKLNVFVLDAPG 4615
Query: 198 KII---DVT-IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
K T IQ A ++++ + GG+A+ + T GD + L
Sbjct: 4616 KPTGPIRATDIQADAMTLSWRPPKDNGGDAITNYVVEKRTPGGD--WVTVGHPVGTTL-- 4671
Query: 254 GDYTVIARNKERNYSREFSVLT 275
RN + N EF V
Sbjct: 4672 -----RVRNLDANTPYEFRVRA 4688
>gi|313004687|emb|CBK19523.1| C. elegans protein ZK617.1e, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|313004689|emb|CBK19525.1| C. elegans protein ZK617.1e, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 6435
Score = 42.6 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 147 IYSNPNHKALLITDKVRSGTLV-------RLGTNNYQITSH--YGKYNAIVSTVVKVEPG 197
I+ N + ++ V G +V R Y+I++ YGK ++ V PG
Sbjct: 4157 IFEN---ERTVV--DVNPGEIVITTTGSKRSDAGPYKISATNKYGKDTCKLNVFVLDAPG 4211
Query: 198 KII---DVT-IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
K T IQ A ++++ + GG+A+ + T GD + L
Sbjct: 4212 KPTGPIRATDIQADAMTLSWRPPKDNGGDAITNYVVEKRTPGGD--WVTVGHPVGTTL-- 4267
Query: 254 GDYTVIARNKERNYSREFSVLT 275
RN + N EF V
Sbjct: 4268 -----RVRNLDANTPYEFRVRA 4284
>gi|193207037|ref|NP_001122835.1| UNCoordinated family member (unc-22) [Caenorhabditis elegans]
gi|126363069|emb|CAM35838.1| C. elegans protein ZK617.1c, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|126363070|emb|CAM35841.1| C. elegans protein ZK617.1c, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 6629
Score = 42.6 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 147 IYSNPNHKALLITDKVRSGTLV-------RLGTNNYQITSH--YGKYNAIVSTVVKVEPG 197
I+ N + ++ V G +V R Y+I++ YGK ++ V PG
Sbjct: 4351 IFEN---ERTVV--DVNPGEIVITTTGSKRSDAGPYKISATNKYGKDTCKLNVFVLDAPG 4405
Query: 198 KII---DVT-IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
K T IQ A ++++ + GG+A+ + T GD + L
Sbjct: 4406 KPTGPIRATDIQADAMTLSWRPPKDNGGDAITNYVVEKRTPGGD--WVTVGHPVGTTL-- 4461
Query: 254 GDYTVIARNKERNYSREFSVLT 275
RN + N EF V
Sbjct: 4462 -----RVRNLDANTPYEFRVRA 4478
>gi|32565889|ref|NP_502274.2| UNCoordinated family member (unc-22) [Caenorhabditis elegans]
gi|74966877|sp|Q23551|UNC22_CAEEL RecName: Full=Twitchin; AltName: Full=Uncoordinated protein 22
gi|26985879|emb|CAA98065.2| C. elegans protein ZK617.1b, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|26985881|emb|CAA98082.2| C. elegans protein ZK617.1b, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 7158
Score = 42.6 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 147 IYSNPNHKALLITDKVRSGTLV-------RLGTNNYQITSH--YGKYNAIVSTVVKVEPG 197
I+ N + ++ V G +V R Y+I++ YGK ++ V PG
Sbjct: 4880 IFEN---ERTVV--DVNPGEIVITTTGSKRSDAGPYKISATNKYGKDTCKLNVFVLDAPG 4934
Query: 198 KII---DVT-IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
K T IQ A ++++ + GG+A+ + T GD + L
Sbjct: 4935 KPTGPIRATDIQADAMTLSWRPPKDNGGDAITNYVVEKRTPGGD--WVTVGHPVGTTL-- 4990
Query: 254 GDYTVIARNKERNYSREFSVLT 275
RN + N EF V
Sbjct: 4991 -----RVRNLDANTPYEFRVRA 5007
>gi|226314143|ref|YP_002774039.1| hypothetical protein BBR47_45580 [Brevibacillus brevis NBRC 100599]
gi|226097093|dbj|BAH45535.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 2184
Score = 42.2 bits (98), Expect = 0.083, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 91/241 (37%), Gaps = 26/241 (10%)
Query: 60 IFDSISNKKNTLSTTKKIIGGKVSFD-LFPGDYLISA-SFGHVGVVKKITVSSKEKNQKQ 117
+FDS + + + G SFD L PG Y ++ + G+ V + + +
Sbjct: 1495 VFDST---RAAVGSVLTDATGSFSFDRLAPGGYTVNVNATGYASDVAGAQIQAGAASV-L 1550
Query: 118 VFILN------AGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVR-L 170
F LN AG +R SPI +T S ++ + +V L
Sbjct: 1551 SFALNELLGGIAGTVR---DEGTASPIAGAVITVRQGSPSGTILAIVLTNAQGQYMVSGL 1607
Query: 171 GTNNYQ-ITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAW 229
+Y I S G + +V + +D ++ + A +T K+ + + +T
Sbjct: 1608 SPGSYTLIASATGFAAEASTAMVGLGATTGLDFSLSSLPANVTGKISDAILATPLPNTLI 1667
Query: 230 SILTASGDTVG----ESANASPSMVLSEGDYTVIARNKERNYSRE---FSVLTGKSTIVE 282
+L + + ++ G+YT++ARN+ Y RE F V G + V
Sbjct: 1668 RLLGNNNTILFATQTDTQGIYFMDGFVAGNYTILARNES--YQRESVSFDVAAGGTATVN 1725
Query: 283 V 283
+
Sbjct: 1726 I 1726
Score = 39.9 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 19/227 (8%)
Query: 46 TENSTSIDSGVSWHIFDSISNKKNTL--STTKKIIGGKVSFDLFPGDYLISAS-FGHVGV 102
+ + + + + TL S +G +L PG YLISAS +
Sbjct: 1828 AAGGAVVPNALV-----QVKDSHGTLFGSAITDDVGHFSVGNLPPGTYLISASENSYATA 1882
Query: 103 VKKITVSSKEKNQKQVFIL-NAGGIRLYSIY--KPGSPIVDDELTFSIYSNPNHKALLIT 159
++ ITV + + + + G + G PI + +++N A +T
Sbjct: 1883 IQSITVPAGQTISGVILTMSPLSGNIFGQVTNQLTGLPITGAAVAIQLFANGLFVANTVT 1942
Query: 160 DKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQ---NRAAKITFKLV 216
++ + L Y + + + T V V G+ T++ L+
Sbjct: 1943 NQSGQFQVKGLTAGEYNVIASADGFGTHYRT-VTVASGQTTVATVELLPFVGTVSGIVLL 2001
Query: 217 SEMGGEAVADTAWSILTAS----GDTVGESANASPSMVLSEGDYTVI 259
+ + + S+ + + + E + ++ G YTVI
Sbjct: 2002 PDGNQASGNNIQLSLFHSKQIRLQNILAEPNGTFHFVNVAPGTYTVI 2048
>gi|291448890|ref|ZP_06588280.1| efflux protein [Streptomyces roseosporus NRRL 15998]
gi|291351837|gb|EFE78741.1| efflux protein [Streptomyces roseosporus NRRL 15998]
Length = 811
Score = 42.2 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 21/198 (10%)
Query: 75 KKIIGGKVSFDLF-PGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY 132
G+ + + G Y LI+A+ GH +TV + + V + AG + +
Sbjct: 595 ASGEDGRYALSVPGAGSYVLIAAAGGHQPQAVSVTVG-ERPVELDVVLGGAGRLAGSVLT 653
Query: 133 KPGSPIVDDELTFSIYSNPNHKALLITD---KVRSGTLVR-LGTNNYQITSHYGKYNAIV 188
G+P+ D +T + + + ++ G ++ L Y + + A
Sbjct: 654 PDGAPVRDAAVTLT-----DVRGEVVASTRTGREGGYVIGELIAGEYTLAA---SAPAFR 705
Query: 189 ST--VVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA--- 243
V V+ + I+ + +V GG V D ++L A+G+ V
Sbjct: 706 PAALPVSVQAARETRQDIELAGGAVLRGVVRATGGRPVEDARVTLLDAAGNVVDTLTTGA 765
Query: 244 -NASPSMVLSEGDYTVIA 260
+ + LS G+YTVIA
Sbjct: 766 DGSFRFVDLSSGEYTVIA 783
>gi|239945434|ref|ZP_04697371.1| major facilitator superfamily permease [Streptomyces roseosporus
NRRL 15998]
gi|239991896|ref|ZP_04712560.1| major facilitator superfamily permease [Streptomyces roseosporus
NRRL 11379]
Length = 817
Score = 42.2 bits (98), Expect = 0.093, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 21/198 (10%)
Query: 75 KKIIGGKVSFDLF-PGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY 132
G+ + + G Y LI+A+ GH +TV + + V + AG + +
Sbjct: 601 ASGEDGRYALSVPGAGSYVLIAAAGGHQPQAVSVTVG-ERPVELDVVLGGAGRLAGSVLT 659
Query: 133 KPGSPIVDDELTFSIYSNPNHKALLITD---KVRSGTLVR-LGTNNYQITSHYGKYNAIV 188
G+P+ D +T + + + ++ G ++ L Y + + A
Sbjct: 660 PDGAPVRDAAVTLT-----DVRGEVVASTRTGREGGYVIGELIAGEYTLAA---SAPAFR 711
Query: 189 ST--VVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA--- 243
V V+ + I+ + +V GG V D ++L A+G+ V
Sbjct: 712 PAALPVSVQAARETRQDIELAGGAVLRGVVRATGGRPVEDARVTLLDAAGNVVDTLTTGA 771
Query: 244 -NASPSMVLSEGDYTVIA 260
+ + LS G+YTVIA
Sbjct: 772 DGSFRFVDLSSGEYTVIA 789
>gi|222444709|ref|ZP_03607224.1| hypothetical protein METSMIALI_00322 [Methanobrevibacter smithii
DSM 2375]
gi|222434274|gb|EEE41439.1| hypothetical protein METSMIALI_00322 [Methanobrevibacter smithii
DSM 2375]
Length = 998
Score = 42.2 bits (98), Expect = 0.095, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Query: 66 NKKNTLSTTKKIIG-GKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVF-ILNA 123
N T I G ++ +L+PG Y+I+ +G V +TV + L+
Sbjct: 871 NINGVFYTRAVINGTATLNINLYPGKYIITTMYGKYAVGNNVTVLPTLITEDLDMKYLDG 930
Query: 124 GGIRLYSIYKPGSPIVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITS 179
++ G P+ + + F++ Y+ + + +RL Y ITS
Sbjct: 931 SNFTAKTLDGQGKPLANQTVFFNVNGILYNRTTDDDGV------ANFPIRLNPGKYIITS 984
Query: 180 HYGKY 184
+ Y
Sbjct: 985 IWNGY 989
>gi|320353549|ref|YP_004194888.1| Cna B domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122051|gb|ADW17597.1| Cna B domain protein [Desulfobulbus propionicus DSM 2032]
Length = 661
Score = 42.2 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 64/164 (39%), Gaps = 8/164 (4%)
Query: 111 KEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRL 170
+ +L G+ ++ + G+ + + ++ S+P+H L +D L RL
Sbjct: 29 RSPTSGNPTVLIPEGLARATLLQGGAALANTQVVAISDSDPDHPQSLTSDASGVAEL-RL 87
Query: 171 GTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWS 230
+Y + G+ + + V + +VT+ + ++ V + + S
Sbjct: 88 PAGSYTFKATLGET--VYQGIGTVLADQTTNVTLNLGTSTLSIT-VRKNETTVLPGVVCS 144
Query: 231 ILTASGDTVGESANAS----PSMVLSEGDYTVIARNKERNYSRE 270
+ TA G+ + SA S + G Y V AR +++ E
Sbjct: 145 LYTAEGEPLDRSATTDGSGVASFAVEAGTYRVQARYLGYDFTSE 188
>gi|51981302|emb|CAF60521.1| putative efflux protein [Streptomyces kanamyceticus]
gi|85813952|emb|CAF31575.1| putative kanamycin efflux protein [Streptomyces kanamyceticus]
Length = 811
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 70/207 (33%), Gaps = 29/207 (14%)
Query: 66 NKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGG 125
G SF L I+A+ GH + +TV+ E+ +L G
Sbjct: 594 GASGEDGRYALSTPGSGSFVL------IAAAGGH--QPQAVTVTVGERPVDLDVVLGGAG 645
Query: 126 IRLYSIY--KPGSPIVDDELTFSIYSNPNHKALLITDKVRSGT----LVRLGTNNYQITS 179
RL G+P+ D +T + + + ++ + L Y + +
Sbjct: 646 -RLAGTVVTADGTPVRDAAVTLT-----DVRGEVVATTRSGREGSYVITELVAGEYTLAA 699
Query: 180 HYGKYNAIVST--VVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGD 237
A V V+ + ++ + V GG V D ++L A+G+
Sbjct: 700 ---SAPAFRPAALPVSVQASRETRQDVELAGGAVLRGTVRASGGRPVEDARVTLLDAAGN 756
Query: 238 TVGESA----NASPSMVLSEGDYTVIA 260
V + LS G+YTVIA
Sbjct: 757 VVDTLTTGADGTFRFIDLSSGEYTVIA 783
>gi|269926461|ref|YP_003323084.1| transcription-repair coupling factor [Thermobaculum terrenum ATCC
BAA-798]
gi|269790121|gb|ACZ42262.1| transcription-repair coupling factor [Thermobaculum terrenum ATCC
BAA-798]
Length = 1150
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 85 DLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN-AGGIRLYSIYKPGSPIVD 140
DL PG Y++ G V + + +++ +L AGG RLY I
Sbjct: 479 DLQPGSYVVHVDHGVAKYVGNV-MRGSSGAEREYLVLEYAGGDRLYVPVDQIDRISP 534
>gi|291455187|ref|ZP_06594577.1| efflux protein [Streptomyces albus J1074]
gi|291358136|gb|EFE85038.1| efflux protein [Streptomyces albus J1074]
Length = 811
Score = 41.8 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 13/163 (7%)
Query: 106 ITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITD---KV 162
+TV+ E+ + +L G RL + + T ++ + + ++
Sbjct: 626 VTVTVGERPVELDVVLGGAG-RLAGSVLTADGLPVRDATVTL---TDVRGEVVASTRSGR 681
Query: 163 RSGTLVR-LGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGG 221
G ++ L Y + + Y + V V+ + ++ + V GG
Sbjct: 682 EGGYVISELVAGEYTLAASAHAYRP-TALPVSVQASRETRQDVELAGGAVLRGTVRAGGG 740
Query: 222 EAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYTVIA 260
V D ++L A G+ V + LS G+YTVIA
Sbjct: 741 RPVEDARVTLLDAGGNVVDSQTTSADGTFRFVDLSSGEYTVIA 783
>gi|182434953|ref|YP_001822672.1| major facilitator superfamily permease [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178463469|dbj|BAG17989.1| putative permease of the major facilitator superfamily
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 821
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 23/199 (11%)
Query: 75 KKIIGGKVSFDLF-PGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY- 132
G+ + + G Y++ A+ G + ++V+ E+ + +L G RL
Sbjct: 605 ASGEDGRYALSVPGAGSYVLIAAAG-GHQPQAVSVTVGERPVELDVVLGGAG-RLAGSVL 662
Query: 133 -KPGSPIVDDELTFSIYSNPNHKALLITD---KVRSGTLVR-LGTNNYQITSHYGKYNAI 187
G+P+ D +T + + + ++ G ++ L Y + + A
Sbjct: 663 TPDGAPVRDAAVTLT-----DVRGEVVASTRTGHEGGYVIGELVAGEYTLAA---SAPAF 714
Query: 188 VST--VVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA-- 243
V V+ + I+ + +V GG V D ++L A+G+ V
Sbjct: 715 RPAALPVSVQAARETRQDIELAGGAVLRGVVRATGGRPVEDARVTLLDAAGNVVDTLTTG 774
Query: 244 --NASPSMVLSEGDYTVIA 260
+ + LS G+YTVIA
Sbjct: 775 PDGSFRFVDLSSGEYTVIA 793
>gi|326775470|ref|ZP_08234735.1| drug resistance transporter, EmrB/QacA subfamily [Streptomyces cf.
griseus XylebKG-1]
gi|326655803|gb|EGE40649.1| drug resistance transporter, EmrB/QacA subfamily [Streptomyces cf.
griseus XylebKG-1]
Length = 818
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 23/199 (11%)
Query: 75 KKIIGGKVSFDLF-PGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY- 132
G+ + + G Y++ A+ G + ++V+ E+ + +L G RL
Sbjct: 602 ASGEDGRYALSVPGAGSYVLIAAAG-GHQPQAVSVTVGERPVELDVVLGGAG-RLAGSVL 659
Query: 133 -KPGSPIVDDELTFSIYSNPNHKALLITD---KVRSGTLVR-LGTNNYQITSHYGKYNAI 187
G+P+ D +T + + + ++ G ++ L Y + + A
Sbjct: 660 TPDGAPVRDAAVTLT-----DVRGEVVASTRTGHEGGYVIGELVAGEYTLAA---SAPAF 711
Query: 188 VST--VVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA-- 243
V V+ + I+ + +V GG V D ++L A+G+ V
Sbjct: 712 RPAALPVSVQAARETRQDIELAGGAVLRGVVRATGGRPVEDARVTLLDAAGNVVDTLTTG 771
Query: 244 --NASPSMVLSEGDYTVIA 260
+ + LS G+YTVIA
Sbjct: 772 PDGSFRFVDLSSGEYTVIA 790
>gi|239983363|ref|ZP_04705887.1| transmembrane efflux protein [Streptomyces albus J1074]
Length = 852
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 13/163 (7%)
Query: 106 ITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITD---KV 162
+TV+ E+ + +L G RL + + T ++ + + ++
Sbjct: 667 VTVTVGERPVELDVVLGGAG-RLAGSVLTADGLPVRDATVTL---TDVRGEVVASTRSGR 722
Query: 163 RSGTLVR-LGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGG 221
G ++ L Y + + Y + V V+ + ++ + V GG
Sbjct: 723 EGGYVISELVAGEYTLAASAHAYRP-TALPVSVQASRETRQDVELAGGAVLRGTVRAGGG 781
Query: 222 EAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYTVIA 260
V D ++L A G+ V + LS G+YTVIA
Sbjct: 782 RPVEDARVTLLDAGGNVVDSQTTSADGTFRFVDLSSGEYTVIA 824
>gi|282864571|ref|ZP_06273626.1| drug resistance transporter, EmrB/QacA subfamily [Streptomyces sp.
ACTE]
gi|282560510|gb|EFB66057.1| drug resistance transporter, EmrB/QacA subfamily [Streptomyces sp.
ACTE]
Length = 845
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 70/184 (38%), Gaps = 20/184 (10%)
Query: 88 PGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFS 146
PG + LI+A+ GH +TV + V + AG + + G+P+ D +T +
Sbjct: 643 PGSFVLIAAAGGHQPQAVSVTVG-ERPVDLDVVLGGAGRLAGAVVTPDGAPVRDAAVTLT 701
Query: 147 IYSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAIVST--VVKVEPGKII 200
+ + ++ + L Y + + A V V+ +
Sbjct: 702 -----DVRGEVVASTRTGREGLYVIGELVAGEYTLAA---SAPAFRPAALPVSVQAARET 753
Query: 201 DVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDY 256
I+ + +V GG V D ++L A+G+ V + + LS G+Y
Sbjct: 754 RQDIELAGGAVLRGVVRAPGGRVVEDARVTLLDAAGNVVDTHTTGPDGSFRFVDLSTGEY 813
Query: 257 TVIA 260
TVIA
Sbjct: 814 TVIA 817
>gi|301166868|emb|CBW26446.1| putative pilus assembly protein [Bacteriovorax marinus SJ]
Length = 797
Score = 41.8 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 29/180 (16%)
Query: 128 LYSIYKPGSPIVDDELTFSIYSNP---NHKALLIT---DKVRSGTLV------RLGTNNY 175
L Y G PI + +F+I + + +LI+ D + G L ++ Y
Sbjct: 613 LDGKYTVGRPITN---SFAILTRDKHLEDEQILISSNGDNIAKGDLFNNILISKIQPYRY 669
Query: 176 QITSH----YGKYNAIVSTVVKVEP----GKIIDVTIQNRAAKITFKLVSEMGGEAVADT 227
+ +I + + P G +I ++Q++ A F + VA
Sbjct: 670 YKVTADSALLSDGLSIEESDFALMPTYKSGSLI--SLQSKGAMSVFGTIFLPDRTRVALA 727
Query: 228 AWSILTASGDTVGESA----NASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEV 283
+ +L A G V S L EG+Y V+ R+++ NY F++ K V++
Sbjct: 728 TFDVLDAKGRVVYGSFTNRKGRILVEGLEEGEYQVLLRHQDENYVSRFTLPKDKVGFVDI 787
>gi|297190886|ref|ZP_06908284.1| transmembrane efflux protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297150663|gb|EDY66589.2| transmembrane efflux protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 807
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 22/185 (11%)
Query: 88 PGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY--KPGSPIVDDELTF 145
PG Y++ A+ G + +TV+ E+ +L G RL + GSP+ D +T
Sbjct: 605 PGAYVMIAAAG-GHQPQAVTVTVGERPVDLDVVLGGAG-RLAGVVVTADGSPVRDAAVTL 662
Query: 146 SIYSNPNHKALLITD---KVRSGTLVR-LGTNNYQITSHYGKYNAIVST--VVKVEPGKI 199
+ + + ++ G ++ L Y + + A V V+ +
Sbjct: 663 T-----DVRGDVVASTRSGREGGYVISELVAGEYTLAA---SAPAFRPAAHPVSVQASRE 714
Query: 200 IDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGD 255
I+ + V G V D ++L A+G+ V + LS G+
Sbjct: 715 TRQDIELAGGAVLRGTVRAGDGRPVDDARVTLLDAAGNVVDTLTTGPDGTFRFVDLSSGE 774
Query: 256 YTVIA 260
YTVIA
Sbjct: 775 YTVIA 779
>gi|329940341|ref|ZP_08289622.1| efflux protein [Streptomyces griseoaurantiacus M045]
gi|329300402|gb|EGG44299.1| efflux protein [Streptomyces griseoaurantiacus M045]
Length = 793
Score = 41.8 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 18/183 (9%)
Query: 88 PGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY--KPGSPIVDDELTF 145
PG Y++ A+ G + ++V+ E+ + +L G RL G+P+ D +T
Sbjct: 591 PGAYVLIAAAG-GHQPQAVSVTVGERPVELDVVLGGAG-RLAGSVLTADGTPVRDAAVTL 648
Query: 146 SIYSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIID 201
+ N ++ + L Y + + + V V +
Sbjct: 649 T-----NAHGEVVGSTRSGAEGSYLITELVAGEYTLAAS-APAYRPAALPVTVHASRETR 702
Query: 202 VTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYT 257
++ + V GG V D ++L A+G+ V + LS G+YT
Sbjct: 703 QDVELAGGAVLRGTVRAGGGRPVEDARVTLLDAAGNVVDSVTTGADGVFRFVDLSSGEYT 762
Query: 258 VIA 260
VIA
Sbjct: 763 VIA 765
>gi|328886362|emb|CCA59601.1| putative efflux protein [Streptomyces venezuelae ATCC 10712]
Length = 831
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 20/183 (10%)
Query: 89 GDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSI 147
G Y LI+A+ GH +TV + V + AG + + G+P+ D +T +
Sbjct: 630 GAYVLIAAAGGHQPQAVSVTVG-DRPIELDVVLGGAGRLAGSVVTADGTPVRDAAVTLT- 687
Query: 148 YSNPNHKALLITD---KVRSGTLVR-LGTNNYQITSHYGKYNAIVST--VVKVEPGKIID 201
+ + ++ G ++ L Y + + A V V+ +
Sbjct: 688 ----DVRGEVVASTRSGREGGYVISELVAGEYTLAA---SAPAFRPAALPVSVQASRETR 740
Query: 202 VTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYT 257
I+ + V GG V D ++L A+G+ V + LS G+YT
Sbjct: 741 QDIELAGGAVLRGTVRAGGGRPVEDARVTLLDAAGNVVDTLTTGADGTFRFVDLSSGEYT 800
Query: 258 VIA 260
VIA
Sbjct: 801 VIA 803
>gi|256784052|ref|ZP_05522483.1| efflux protein [Streptomyces lividans TK24]
Length = 769
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 89 GDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSI 147
G Y LI+A+ GH +TV + + V + AG + + GSP+ D +T +
Sbjct: 568 GAYVLIAAAGGHQPQAVSVTVG-ERPVELDVVLGGAGRLAGSVVTADGSPVRDATVTLT- 625
Query: 148 YSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAIVST--VVKVEPGKIID 201
N ++ + L Y + + A V V+ +
Sbjct: 626 ----NVHGEVVATTRSGREGGYVITELVAGEYTLAA---SAPAFRPAALPVSVQAARETR 678
Query: 202 VTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYT 257
++ + V GG AV D ++L A+G+ V + LS G+YT
Sbjct: 679 QDVELAGGAVLRGTVRASGGRAVEDARVTLLDAAGNVVDTLTTGPDGTFRFVDLSSGEYT 738
Query: 258 VIA 260
VIA
Sbjct: 739 VIA 741
>gi|289767933|ref|ZP_06527311.1| efflux protein [Streptomyces lividans TK24]
gi|289698132|gb|EFD65561.1| efflux protein [Streptomyces lividans TK24]
Length = 809
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 89 GDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSI 147
G Y LI+A+ GH +TV + + V + AG + + GSP+ D +T +
Sbjct: 608 GAYVLIAAAGGHQPQAVSVTVG-ERPVELDVVLGGAGRLAGSVVTADGSPVRDATVTLT- 665
Query: 148 YSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAIVST--VVKVEPGKIID 201
N ++ + L Y + + A V V+ +
Sbjct: 666 ----NVHGEVVATTRSGREGGYVITELVAGEYTLAA---SAPAFRPAALPVSVQAARETR 718
Query: 202 VTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYT 257
++ + V GG AV D ++L A+G+ V + LS G+YT
Sbjct: 719 QDVELAGGAVLRGTVRASGGRAVEDARVTLLDAAGNVVDTLTTGPDGTFRFVDLSSGEYT 778
Query: 258 VIA 260
VIA
Sbjct: 779 VIA 781
>gi|239927840|ref|ZP_04684793.1| transmembrane efflux protein [Streptomyces ghanaensis ATCC 14672]
gi|291436181|ref|ZP_06575571.1| transmembrane efflux protein [Streptomyces ghanaensis ATCC 14672]
gi|291339076|gb|EFE66032.1| transmembrane efflux protein [Streptomyces ghanaensis ATCC 14672]
Length = 806
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 22/185 (11%)
Query: 88 PGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY--KPGSPIVDDELTF 145
PG Y++ A+ G + ++V+ E+ + +L G RL G+P+ D +T
Sbjct: 604 PGAYVLIAAAG-GHQPQAVSVTVGERPVELDVVLGGAG-RLAGSVLTADGTPVRDAAVTL 661
Query: 146 SIYSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAIVST--VVKVEPGKI 199
+ N ++ + L Y + + A V V+ +
Sbjct: 662 T-----NVHGQVVASTHSGREGGYVITELVAGEYTLAA---SAPAFRPAALPVTVQAARE 713
Query: 200 IDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGD 255
++ + V GG V + ++L A+G+ V + LS G+
Sbjct: 714 TRQDVELAGGAVLRGTVRAGGGRPVEEARVTLLDAAGNVVDTLTTGPDGTFRFVDLSSGE 773
Query: 256 YTVIA 260
YTVIA
Sbjct: 774 YTVIA 778
>gi|21224787|ref|NP_630566.1| efflux protein [Streptomyces coelicolor A3(2)]
gi|4154078|emb|CAA22731.1| putative efflux protein [Streptomyces coelicolor A3(2)]
Length = 815
Score = 41.4 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 89 GDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSI 147
G Y LI+A+ GH +TV + + V + AG + + GSP+ D +T +
Sbjct: 614 GAYVLIAAAGGHQPQAVSVTVG-ERPVELDVVLGGAGRLAGSVMTADGSPVRDATVTLT- 671
Query: 148 YSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAIVST--VVKVEPGKIID 201
N ++ + L Y + + A V V+ +
Sbjct: 672 ----NVHGEVVATTRSGREGGYVITELVAGEYTLAA---SAPAFRPAALPVSVQAARETR 724
Query: 202 VTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYT 257
++ + V GG AV D ++L A+G+ V + LS G+YT
Sbjct: 725 QDVELAGGAVLRGTVRASGGRAVEDARVTLLDAAGNVVDTLTTGPDGTFRFVDLSSGEYT 784
Query: 258 VIA 260
VIA
Sbjct: 785 VIA 787
>gi|189424285|ref|YP_001951462.1| alpha-2-macroglobulin [Geobacter lovleyi SZ]
gi|189420544|gb|ACD94942.1| alpha-2-macroglobulin domain protein [Geobacter lovleyi SZ]
Length = 1704
Score = 41.1 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 21/146 (14%)
Query: 32 RVVDAQRITCEARLTEN---------STSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKV 82
V A + A L+ N S S++ G W + L
Sbjct: 193 TVRKAGTVEISASLSSNRYMSSASGVSLSLNGGTVWR--SDKLDSTGKLKIG-------- 242
Query: 83 SFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDE 142
L PG Y ++ S + ++ + + Q+ + N L + +
Sbjct: 243 --MLPPGSYTVAVSDERMERTEQQLTLKEGEQQQLSLVANPRPPSLDVELYGDVILSNKA 300
Query: 143 LTFSIYSNPNHKALLITDKVRSGTLV 168
+ +Y KA + +++ ++
Sbjct: 301 VAVRVYGLWVTKAQVTINRIAPEAII 326
>gi|163848830|ref|YP_001636874.1| alpha-2-macroglobulin domain-containing protein [Chloroflexus
aurantiacus J-10-fl]
gi|163670119|gb|ABY36485.1| alpha-2-macroglobulin domain protein [Chloroflexus aurantiacus
J-10-fl]
Length = 1163
Score = 41.1 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 15/132 (11%), Positives = 42/132 (31%), Gaps = 11/132 (8%)
Query: 48 NSTSIDSGVS-WHIFDSISNKKNTLSTTKKIIGGKVS---FDLFPGDYLISASFGHVGVV 103
+ I + + + + ++ + + GG + L PG Y ++ G
Sbjct: 894 DGPPIPNSLVELEVRRTSNDPPLLVRRVRTNAGGTANTELVPLAPGRYEVTVRSGLSVSR 953
Query: 104 KKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPI----VDDELTFSIYSNPNHKALLIT 159
+++ V+ + ++ R + + T + + A I
Sbjct: 954 RQLWVAGSGIATAEPMLVTD---RTAYTVGETARLLISGPTGGGTLLLIAGQGDTARTIL 1010
Query: 160 DKVRSGTLVRLG 171
++ GT++
Sbjct: 1011 TTLQPGTIIPFP 1022
>gi|115380774|ref|ZP_01467654.1| putative efflux protein [Stigmatella aurantiaca DW4/3-1]
gi|115362219|gb|EAU61574.1| putative efflux protein [Stigmatella aurantiaca DW4/3-1]
Length = 454
Score = 41.1 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 22/231 (9%)
Query: 40 TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFD-LFPGDYLISASFG 98
T E R+T + + V + L+ + G F LFP + +++A G
Sbjct: 102 TLEVRVTRDGAPAAATV--RLKAD------HLARQARAEGAPARFTGLFPDEVVVTAEAG 153
Query: 99 HVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKP-GSPIVDDELTFSIYSNPNHKALL 157
+G V +I V+ E + L G ++ G P+ E+T +K +
Sbjct: 154 SLGSVPRI-VTLDEAVTQVTLELEEAGRLFVTVVDEAGEPVPQPEVTLR-----TNKGEV 207
Query: 158 IT-DKVRSGTLVRLGT---NNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITF 213
I +KV++G LV LG +Y + H + V +V+ G+ + ++ A +
Sbjct: 208 IRHEKVQTGALVELGPLGVGDYTLVGH-AEGFRDVELPARVKAGE-TSLELEMARATLIS 265
Query: 214 KLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKE 264
V + G + + + ++ + V + G Y + A + E
Sbjct: 266 GQVMDEYGRPAPGVSVLVQPTGDAVLADADGHFSAQVPTPGLYELHAHHSE 316
>gi|91777562|ref|YP_552770.1| hypothetical protein Bxe_B2573 [Burkholderia xenovorans LB400]
gi|91690222|gb|ABE33420.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 1603
Score = 40.7 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 68/220 (30%), Gaps = 34/220 (15%)
Query: 82 VSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDD 141
L PG Y++ A G+ + VS K ++G + + G P+ +
Sbjct: 255 PVGKLPPGLYIVEAVIGNYRAHTLLFVSDTVAVVKAA---SSGMLVWTTRRDNGKPVANT 311
Query: 142 ELTFSIYSN------PNHKALLITDKVRSGTLVRLG----------TNNYQITSHYGKYN 185
E++++ L+ V LG N Y + Y
Sbjct: 312 EVSWTDGVGVLQSGATGGDGALVLQHVSPERSYVLGTDPQGGVFVSENFYYDSEIYNTKI 371
Query: 186 AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGES--- 242
V+ PG + V R TF+ ++ A AD +L +G V S
Sbjct: 372 YAVTDRPMYRPGDPVHVKFIGR----TFQSATQSSAPAEADIRLDVLDPNGAPVASSKVH 427
Query: 243 ----ANASPSMVL----SEGDYTVIARNKERNYSREFSVL 274
A + L + G YT+ Y F V
Sbjct: 428 FASGTGADTAFTLPADATAGGYTLRFDYNGDVYGSAFRVA 467
>gi|302555245|ref|ZP_07307587.1| transmembrane efflux protein [Streptomyces viridochromogenes DSM
40736]
gi|302472863|gb|EFL35956.1| transmembrane efflux protein [Streptomyces viridochromogenes DSM
40736]
Length = 457
Score = 40.7 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 21/199 (10%)
Query: 74 TKKIIGGKVSFDLF-PGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSI 131
G+ + PG Y LI+A+ GH +TV + + + + AG + +
Sbjct: 240 VASGEDGRYALATPGPGAYVLIAAAGGHQPQAVSVTVG-ERPVELDIVLGGAGNLVGSVV 298
Query: 132 YKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGT----LVRLGTNNYQITSHYGKYNAI 187
G+P+ D +T + N ++ + L Y + + A
Sbjct: 299 TADGTPVRDATVTLT-----NVHGEVVATTRSGREGGYIITELVAGEYTLAA---SAPAF 350
Query: 188 VST--VVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA-- 243
V V+ + I+ + V GG V D ++L +G+ V
Sbjct: 351 RPAALPVTVQAARETRRDIELAGGAVLRGTVRAGGGRPVEDARVTLLDVAGNVVDTLTTG 410
Query: 244 --NASPSMVLSEGDYTVIA 260
+ LS G+YTVIA
Sbjct: 411 PDGTFRFVDLSSGEYTVIA 429
>gi|261855224|ref|YP_003262507.1| hypothetical protein Hneap_0607 [Halothiobacillus neapolitanus c2]
gi|261835693|gb|ACX95460.1| conserved hypothetical protein [Halothiobacillus neapolitanus c2]
Length = 157
Score = 40.7 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 211 ITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMV--LSEGDYTVIARNKERNYS 268
+TF +V GGE VAD I A G ++ E+ + P M L G Y V A + +
Sbjct: 81 LTFAVV--PGGEFVADVPVRISDAKGASILEATSDGPQMFVQLPVGKYQVEATHDGQAIK 138
Query: 269 REFSVLTGKSTIVEV 283
R F+V +S + +
Sbjct: 139 RSFTVANARSVQITI 153
>gi|330814635|ref|YP_004362810.1| putative polyketide synthase [Burkholderia gladioli BSR3]
gi|327374627|gb|AEA65978.1| putative polyketide synthase [Burkholderia gladioli BSR3]
Length = 4372
Score = 40.7 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 63/196 (32%), Gaps = 12/196 (6%)
Query: 21 LNNNISKGKGKRVVDAQRITCEARLTENSTSI-DSGVSWHIFDSISNKKNTLSTTKKIIG 79
L + + + T A L ++ G W + + T ++
Sbjct: 1864 LMADAADDNLATFLAGAMPTLAACLGQDDAVAGRDGQWWRPRLTPLGEAGKTGLTDEVNE 1923
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFIL----NAGGIRLYSIYKPG 135
G YL++ + G +G + T + + + +L AGG +
Sbjct: 1924 ATPLALRHDGLYLVAGAHGALG--RHTTQWLAARGARHLVLLGRRAPAGGWQASLALLRS 1981
Query: 136 SPIVDDELTFSIYSNPN-HKALLITDKVRSGTLVRLGTNNYQI--TSHYGKYNAIVSTVV 192
I D + + S +A D + + T RL + TS + + +I
Sbjct: 1982 RGIRIDCIEADVASEAQMAQAFAAVDALEAETGRRL-AGVFHCAGTSRFNELASITREDC 2040
Query: 193 -KVEPGKIIDVTIQNR 207
+V KI V +R
Sbjct: 2041 EQVSRAKIGGVWWLHR 2056
>gi|318079693|ref|ZP_07987025.1| transmembrane efflux protein [Streptomyces sp. SA3_actF]
Length = 258
Score = 40.7 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 24/185 (12%)
Query: 89 GDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIY--KPGSPIVDDELTFS 146
G Y++ A+ G + +TV+ E+ + +L G RL G+P+ +T +
Sbjct: 57 GSYVLIAAAG-GHQPQAVTVTVAERPVELDVVLGGAG-RLAGRVVTADGTPVAGASVTLT 114
Query: 147 -------IYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKI 199
++ H + D + +G + + + V+ +
Sbjct: 115 DVRGEVVAHARSEHDGAYVLDDLVAGE---------YTLAASATAFRPAALPLTVQAARE 165
Query: 200 IDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTV----GESANASPSMVLSEGD 255
I+ + V GG V D ++L A+G+ V E+ + + LS G+
Sbjct: 166 TRQDIELAGGAVLRGTVRARGGRPVEDARVTLLDAAGNVVDSLTTEADGSFRFVDLSSGE 225
Query: 256 YTVIA 260
YTVIA
Sbjct: 226 YTVIA 230
>gi|261350862|ref|ZP_05976279.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
gi|288860479|gb|EFC92777.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
Length = 770
Score = 40.7 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 22/130 (16%)
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
+ ++ T++ + +L PG Y+++A + V + V S
Sbjct: 648 YKRTVDENGTVTL---------NINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMK 698
Query: 121 LNAGGIRLYSIY--KPGSPIVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNN 174
G + + G P+ + + F+I Y+ + + +RL
Sbjct: 699 FKDGS-KFNATVLDGQGKPLANQTVIFNINGVFYNKTTADDGVASLN------IRLLRGE 751
Query: 175 YQITSHYGKY 184
Y ITS + Y
Sbjct: 752 YIITSIWNSY 761
>gi|222526782|ref|YP_002571253.1| Large extracellular alpha-helical protein-like protein [Chloroflexus
sp. Y-400-fl]
gi|222450661|gb|ACM54927.1| Large extracellular alpha-helical protein-like protein [Chloroflexus
sp. Y-400-fl]
Length = 1725
Score = 40.7 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 15/132 (11%), Positives = 42/132 (31%), Gaps = 11/132 (8%)
Query: 48 NSTSIDSGVS-WHIFDSISNKKNTLSTTKKIIGGKVS---FDLFPGDYLISASFGHVGVV 103
+ I + + + + ++ + + GG + L PG Y ++ G
Sbjct: 894 DGPPIPNSLVELEVRRTSNDPPLLVRRVRTNAGGTANTELVPLAPGRYEVTVRSGLSVSR 953
Query: 104 KKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPI----VDDELTFSIYSNPNHKALLIT 159
+++ V+ + ++ R + + T + + A I
Sbjct: 954 RQLWVAGSGIATAEPMLVTD---RTAYTVGETARLLISGPTGGGTLLLIAGQGDTARTIL 1010
Query: 160 DKVRSGTLVRLG 171
++ GT++
Sbjct: 1011 TTLQPGTIIPFP 1022
>gi|330834154|ref|YP_004408882.1| hypothetical protein Mcup_0290 [Metallosphaera cuprina Ar-4]
gi|329566293|gb|AEB94398.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
Length = 128
Score = 40.7 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 8/96 (8%)
Query: 1 MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI 60
+TI+ + A + T T LN + GK V + S ++ G+ +
Sbjct: 16 ITIAGVALASSYKTTLTITSLNAPLIDGKYTLEVK---VIMNYGPFGGSQPLNDGIV-QV 71
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISAS 96
+ + T + G +F L PG Y + +
Sbjct: 72 Y----GQDGTFYRNFTMSNGVATFYLPPGTYTVYVA 103
>gi|118591412|ref|ZP_01548810.1| von Willebrand factor type A domain protein [Stappia aggregata IAM
12614]
gi|118436084|gb|EAV42727.1| von Willebrand factor type A domain protein [Stappia aggregata IAM
12614]
Length = 657
Score = 40.7 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 32/220 (14%)
Query: 7 SYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSW---HIFDS 63
+Y A + + L +++ + K + +A E+ I+ V W + D
Sbjct: 187 TYWNARDADGLNEALKESVAAVEEKAPLPVT--VLKAADKESGQPIEGPVQWTVARVDDE 244
Query: 64 ISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFG--HVGVVKKITVSSKEKNQKQVFIL 121
I GG V +L PG Y++SA G G +++ ++ L
Sbjct: 245 TVVASG-------ITGGSVEVELEPGSYVVSAELGEKAGGASLEVSDKGGQQTVLLDGNL 297
Query: 122 N----------AGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALL---ITDKVRSGTLV 168
A L + G + D L + L + D + +
Sbjct: 298 PEASVTPASLEAPATTLLEVAFEGPGLDGDFLCVVTPDGNRLERDLWAYVRDGNPAKLAM 357
Query: 169 RLGTNNYQITSHY--GKYNAIVSTVVKVEPGKIIDVTIQN 206
+Y++ + G + VKV + T+
Sbjct: 358 PTQPGDYEVVYVWTEGGERVLARAPVKVTE---VQATLTY 394
>gi|116622935|ref|YP_825091.1| hypothetical protein Acid_3837 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226097|gb|ABJ84806.1| hypothetical protein Acid_3837 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 67/224 (29%), Gaps = 33/224 (14%)
Query: 67 KKNTLSTTKKIIGGKVSFDLFPGDYLI---SASF-----GHVGVVK---KITVSSKEKNQ 115
S+ G + L PG Y I F G G K + +++ K
Sbjct: 48 APGATSSVATDSSGNFAATLEPGTYRISADHTGFIPAQLGARGPSKPSPPLVLTAGRKTT 107
Query: 116 KQVFILNAGGIRLYSIYK-PGSPIVDDELTFSIYSNPNHKALLITDK------VRSGTLV 168
Q L G+ I G P+ + ++ S + L + +
Sbjct: 108 GQRINLYPQGVISGRIVDEDGEPVPNVDVQVSRLQYMAGRKQLSRSNSRMTNDLGEYRIF 167
Query: 169 RLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQN-------RAAKITFKLVSEMGG 221
L Y + NA+ + + G+ V+ AA + S++G
Sbjct: 168 GLSPGRYYL-------NAVYRSDPTL-AGEGQYVSTYYPRTPDPAAAAPLEIVPGSQLGN 219
Query: 222 EAVADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNKER 265
V +T G + ES M+LS + A R
Sbjct: 220 IDVTLVRIRTVTVKGRVISESGGGDIHMILSASNPLGAANENGR 263
>gi|291004840|ref|ZP_06562813.1| integral membrane transport protein [Saccharopolyspora erythraea
NRRL 2338]
Length = 854
Score = 40.3 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 84/233 (36%), Gaps = 20/233 (8%)
Query: 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLF-PGDYLISAS 96
+ +T+ S + GV + DS + + G+ + G Y++ AS
Sbjct: 604 DLHLHGSVTDASGAPVEGVVLTLTDSSGRQAGR---VRTSGDGRYRLAVPHGGSYVLIAS 660
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKAL 156
G + V V + AGG+ + + G+ E++ ++ + +
Sbjct: 661 GGSYQPTASMVVIGDRPVAHDVRMFGAGGV--SGVVRAGAR----EVSGAMVLLTDVRGE 714
Query: 157 LITDKV--RSGTLV--RLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+I G V L Y +T +T V V+ G+ + + + +A
Sbjct: 715 VIGSCATGEGGRYVFGGLVGGVYALTVT-ADGYRPTATSVHVDDGEQVQLDVALQAGTTL 773
Query: 213 FKLVSEMGGEA-VADTAWSILTASGDTVGESA----NASPSMVLSEGDYTVIA 260
+V G +A V D ++L G V + L EG+YTVIA
Sbjct: 774 SGVVRAPGLDAPVPDARVTLLDVDGVVVAAATTGADGGYEFTDLPEGEYTVIA 826
>gi|118431127|ref|NP_147369.2| hypothetical protein APE_0620.1 [Aeropyrum pernix K1]
gi|116062451|dbj|BAA79590.2| hypothetical protein [Aeropyrum pernix K1]
Length = 1950
Score = 40.3 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 74/220 (33%), Gaps = 16/220 (7%)
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA-SFGHVGVVKKITVSSKEKNQKQVFIL 121
I+ + + G V L PG Y+I + G+ + V +
Sbjct: 867 EITAPTGRSARVAEP-GDSVRIPLPPGSYIIRVEAPGYSPAEAQAEVGRAASLVTVLMEP 925
Query: 122 NAGGIRLYSIYKP-----GSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQ 176
+ + ++ G I + F++ + + V L + Y+
Sbjct: 926 AYNEVTVRAVLSDPTGLFGGSIKGARIAFTLEEPSLGYRVEVDTGEEGEAQVTLRSGVYR 985
Query: 177 ITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKL------VSEMGGEAVADTAWS 230
+ + V + V++ +++ + A+ ++ +L V GG V T
Sbjct: 986 VEVEHHILGKTVYSGVEILSPGPLEIPLPAGASSLSLRLIDGELGVDAPGGFTVTLTY-- 1043
Query: 231 ILTASGDTVGESANASPSMVLSEGDYTVIARNKERNYSRE 270
+LT + +++ S+ EG Y ++ + E Y
Sbjct: 1044 LLTGESRSFVTRSSSF-SLEAPEGLYRILVSSLEGYYEDT 1082
>gi|308477027|ref|XP_003100728.1| CRE-UNC-22 protein [Caenorhabditis remanei]
gi|308264540|gb|EFP08493.1| CRE-UNC-22 protein [Caenorhabditis remanei]
Length = 7364
Score = 40.3 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 147 IYSNPNHKALLITDKVRSGTLV-------RLGTNNYQITSH--YGKYNAIVSTVVKVEPG 197
I+ N + ++ V G +V R Y+I++ YGK ++ V PG
Sbjct: 5068 IFEN---ERTVV--DVNPGEIVITTTGSKRSDAGPYKISATNKYGKDTCKLNVFVLDAPG 5122
Query: 198 KII---DVT-IQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSE 253
K T IQ+ A ++++ + GG+ + + T GD + L
Sbjct: 5123 KPTGPIRATDIQSDAMTLSWRPPKDNGGDEITNYVVEKRTPGGD--WVTVGHPVGTTL-- 5178
Query: 254 GDYTVIARNKERNYSREFSVLT 275
RN + N EF V
Sbjct: 5179 -----RVRNLDANTPYEFRVRA 5195
>gi|296159720|ref|ZP_06842542.1| alpha-2-macroglobulin domain protein [Burkholderia sp. Ch1-1]
gi|295889934|gb|EFG69730.1| alpha-2-macroglobulin domain protein [Burkholderia sp. Ch1-1]
Length = 1602
Score = 40.3 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 67/220 (30%), Gaps = 34/220 (15%)
Query: 82 VSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDD 141
L PG Y++ A G+ + VS K + G + + G P+ +
Sbjct: 258 PVGKLPPGLYIVEAVIGNYRAHTLLFVSDTVAVVKAA---SGGMLVWTTRRDNGKPVANT 314
Query: 142 ELTFSIYSN------PNHKALLITDKVRSGTLVRLG----------TNNYQITSHYGKYN 185
E++++ L+ V LG N Y + Y
Sbjct: 315 EVSWTDGVGVLQSGATGGDGALVLQHVSPERSYVLGTDPQGGVFVSENFYYDSEIYNTKI 374
Query: 186 AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGES--- 242
V+ PG + V R TF+ ++ A AD +L +G V S
Sbjct: 375 YAVTDRPMYRPGDPVHVKFIGR----TFQSATQSSAPAEADIKLDVLDPNGAPVASSKVH 430
Query: 243 ----ANASPSMVL----SEGDYTVIARNKERNYSREFSVL 274
A + L + G YT+ Y F V
Sbjct: 431 FASGTGADTAFTLPADATAGGYTLRFDYNGDVYGSAFRVA 470
>gi|222444601|ref|ZP_03607116.1| hypothetical protein METSMIALI_00213 [Methanobrevibacter smithii
DSM 2375]
gi|222434166|gb|EEE41331.1| hypothetical protein METSMIALI_00213 [Methanobrevibacter smithii
DSM 2375]
Length = 770
Score = 39.9 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 22/130 (16%)
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
+ ++ T++ + +L PG Y+++A + V + V S
Sbjct: 648 YKRTVDENGTVTL---------NINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLFMK 698
Query: 121 LNAGGIRLYSIY--KPGSPIVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNN 174
G + + G P+ + + F+I Y+ + + +RL
Sbjct: 699 FKDGS-KFNATVLDGQGKPLANQTVIFNINGVFYNKTTADNGVASLN------IRLLRGE 751
Query: 175 YQITSHYGKY 184
Y ITS + Y
Sbjct: 752 YIITSIWNSY 761
>gi|289434999|ref|YP_003464871.1| cell wall surface anchor family protein, putative [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171243|emb|CBH27785.1| cell wall surface anchor family protein, putative [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 1722
Score = 39.9 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 31/212 (14%)
Query: 93 ISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPN 152
I+ + G V + V + ++ + L + V +E F IY+
Sbjct: 629 INRTEGTKEAVLQTDVVLDVSTDTETAFIDVTSVALAAGKYTSLADVRNEGHFHIYAGTV 688
Query: 153 HKALLITDKVR----SGTLVRLGT-NNYQITSHYGKYNAIVSTVVKVE-----PGKIIDV 202
K + V + Y +T+ + V+ ++V+ G V
Sbjct: 689 GKTPIDPSYVTLTEDPENPIDWNAPGVYYVTASLDPASGFVAKDIQVQVAVVDVGDPQVV 748
Query: 203 TIQNRAAKITFKLVS---EMGGEAVADTAWSILTASGDTVG---ESAN---------ASP 247
++ T LV+ ++ G + WSI ++G + E + A
Sbjct: 749 SVDMDTYNPTTALVTAEDDINGAGIYKINWSIKDSNGIIIQNGVEESGETIRVQTPVAID 808
Query: 248 SMVLSEGDYTVIARNKERN------YSREFSV 273
L++G+YT+ +R + ++F+V
Sbjct: 809 LATLNDGNYTLSVNAADRIGHTSEAFEKDFTV 840
>gi|288869802|ref|ZP_05976375.2| gp5 C- repeat family protein [Methanobrevibacter smithii DSM 2374]
gi|288860298|gb|EFC92596.1| gp5 C- repeat family protein [Methanobrevibacter smithii DSM 2374]
Length = 2065
Score = 39.9 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVF- 119
+ +S++ +S S L PGDY+++A + V + V + V
Sbjct: 1943 YHRVSDENGIVSL---------SIKLRPGDYIVTAEYEGCRVSNNVKVLPTLVTKDLVMK 1993
Query: 120 ILNAGGIRLYSIYKPGSPIVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNY 175
++ ++ G+P+ + +++F++ Y + + + +RL Y
Sbjct: 1994 YMDGSSFTAQTLDGQGNPLANQKISFNVNGVFYHRTTDENGMASLN------IRLNPGKY 2047
Query: 176 QITSHYGKY 184
ITS + +Y
Sbjct: 2048 IITSIWNEY 2056
>gi|29828445|ref|NP_823079.1| transmembrane efflux protein [Streptomyces avermitilis MA-4680]
gi|29605548|dbj|BAC69614.1| putative transmembrane efflux protein [Streptomyces avermitilis
MA-4680]
Length = 792
Score = 39.9 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 14/180 (7%)
Query: 89 GDY-LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSI 147
G Y LI+A+ GH + ++V+ E+ + +L G RL E ++
Sbjct: 591 GSYVLIAAAGGH--QPQAVSVTVGERPVELDVVLGGAG-RLAGSVLTADGTPVREAIVTL 647
Query: 148 YSNPNHKALLITDKVRSGTLV-RLGTNNYQITSHYGKYNAIVST--VVKVEPGKIIDVTI 204
+ G ++ L Y + + A V V+ + +
Sbjct: 648 TNVHGEVVSTTRSGREGGYVITELVAGEYTLAA---SAPAFRPAALPVTVQAARETRQDV 704
Query: 205 QNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYTVIA 260
+ + V GG V D ++L A+G+ V + LS G+YTVIA
Sbjct: 705 ELAGGAVLRGTVRAGGGRPVEDARVTLLDAAGNVVDTLTTGGDGTFRFVDLSSGEYTVIA 764
>gi|260828327|ref|XP_002609115.1| hypothetical protein BRAFLDRAFT_126140 [Branchiostoma floridae]
gi|229294469|gb|EEN65125.1| hypothetical protein BRAFLDRAFT_126140 [Branchiostoma floridae]
Length = 435
Score = 39.9 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 86 LFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGS 136
L PG Y ++A+ G K TV S F L+A G+ G
Sbjct: 381 LRPGTYSVTATKGQASQTKSCTVGSGAATTCD-FTLDAAGVLSGGTTGTGR 430
>gi|150024130|ref|YP_001294956.1| putative adhesin precursor SprB [Flavobacterium psychrophilum
JIP02/86]
gi|149770671|emb|CAL42135.1| Putative adhesin precursor SprB [Flavobacterium psychrophilum
JIP02/86]
Length = 3325
Score = 39.9 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 73/229 (31%), Gaps = 34/229 (14%)
Query: 28 GKGKRVVDAQRITCEARLTENSTSIDSGVSW---------HIFDSIS-NKKNTLSTTKKI 77
GK + A + A T ++ ++++GV +++ + T
Sbjct: 1925 GKFDILESATDLVLSATTTNDNCNVNAGVITPTVSGGTGPYLYQYLPTGSSAPTVTLPGA 1984
Query: 78 IGGKVSFDLFPGDYLISA--SFGHVGVVKKITVSSKEKNQKQVFILNA----GGIRLYSI 131
+F+ G Y + ++G + V +T+ +++A G ++
Sbjct: 1985 WTATNTFNGESGTYDVYVRDAYGCIKTV-PVTIGLDPSPIITANLVDACVAQGTYKINVA 2043
Query: 132 YKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTN--NYQITSHYGKYNAI-- 187
TFSI + L + Q+ G N +
Sbjct: 2044 MPTAGMPP---YTFSI------DGGAFVANTTPFIISGLSSGVHTVQVKDKNGCGNTVSV 2094
Query: 188 -VSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTAS 235
+ T + V T N IT S GG A A+ +++L+ +
Sbjct: 2095 TILTPLIVSAVFTTQPTCFNNNGTIT---ASASGGSAPANYTYTLLSNA 2140
>gi|222444494|ref|ZP_03607009.1| hypothetical protein METSMIALI_00106 [Methanobrevibacter smithii DSM
2375]
gi|222434059|gb|EEE41224.1| hypothetical protein METSMIALI_00106 [Methanobrevibacter smithii DSM
2375]
Length = 2065
Score = 39.9 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 84 FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVF-ILNAGGIRLYSIYKPGSPIVDDE 142
L PGDY+++A + V + V + V ++ ++ G P+ + +
Sbjct: 1957 IKLRPGDYIVTAEYEGCRVSNNVKVLPTLVTKDLVMKYMDGSSFTAQTLDGQGKPLANQK 2016
Query: 143 LTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
++F++ Y + + + +RL + Y ITS + +Y
Sbjct: 2017 ISFNVNGVFYHRTTDENGMASLN------IRLNSGKYIITSIWNEY 2056
>gi|148643228|ref|YP_001273741.1| putative adhesin-like protein [Methanobrevibacter smithii ATCC
35061]
gi|148552245|gb|ABQ87373.1| putative adhesin-like protein [Methanobrevibacter smithii ATCC
35061]
Length = 1055
Score = 39.5 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 83 SFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG-GIRLYSIYKPGSPIVDD 141
+ +L PG Y+I+A + V KI V + G + + G P+
Sbjct: 301 NINLNPGHYIITAMYNSCFVSNKILVKPTIQTNDLEMNFKDGSAFKTFVTTNEGKPVGAG 360
Query: 142 E-LTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
E +TF+I N + + L Y ITSHY
Sbjct: 361 ENVTFNI--NGVFYTKTTNSNSIASLNINLNPGEYIITSHY 399
>gi|161523863|ref|YP_001578875.1| hypothetical protein Bmul_0683 [Burkholderia multivorans ATCC
17616]
gi|189351376|ref|YP_001947004.1| hypothetical protein BMULJ_02577 [Burkholderia multivorans ATCC
17616]
gi|221211367|ref|ZP_03584346.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|160341292|gb|ABX14378.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
gi|189335398|dbj|BAG44468.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
gi|221168728|gb|EEE01196.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 146
Score = 39.5 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 15 HTTSTLLNNNISKGKGKRVVDAQRITCEA-----RLTENSTSIDSGVSWHIFDSISNKKN 69
T + +S G GK A A R T + V I + K
Sbjct: 37 EATQQGDISFVSGGIGKDQSTAFERNESAWPLALRFTGKGGEYLADVHVRI----VDGKG 92
Query: 70 TLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKE 112
T G + L PG Y + AS+ + +TV +K
Sbjct: 93 TEVLKTDARGPYMLVKLPPGRYTVHASYQGSDETRAVTVGAKG 135
>gi|148642231|ref|YP_001272744.1| hypothetical protein Msm_0171 [Methanobrevibacter smithii ATCC
35061]
gi|148551248|gb|ABQ86376.1| conserved hypothetical membrane protein Msm_0171
[Methanobrevibacter smithii ATCC 35061]
Length = 770
Score = 39.5 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 22/130 (16%)
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI 120
+ ++ T++ + +L PG Y+++A + V + V S
Sbjct: 648 YKRTVDENGTVTL---------NINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMK 698
Query: 121 LNAGGIRLYSIY--KPGSPIVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNN 174
G + + G P+ + + F++ Y+ + + +RL
Sbjct: 699 FKDGS-KFNATVLDGQGKPLANQTVIFNVNGVFYNKTTADNGVASLN------IRLLRGE 751
Query: 175 YQITSHYGKY 184
Y ITS + Y
Sbjct: 752 YIITSIWNSY 761
>gi|160881163|ref|YP_001560131.1| hypothetical protein Cphy_3035 [Clostridium phytofermentans ISDg]
gi|160429829|gb|ABX43392.1| hypothetical protein Cphy_3035 [Clostridium phytofermentans ISDg]
Length = 687
Score = 39.5 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 168 VRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADT 227
V L Y I + + + V GKI DV A K + GE
Sbjct: 393 VVLNNGTYNIEAAEASNGYVSKLSLTVAGGKITDVVWDCEDANGNLKSIQSQNGE----- 447
Query: 228 AWSILTASGDTVGESANASPSMVLS 252
++TA G T E A A V++
Sbjct: 448 --YVMTADGATWYEQAQALAQYVIA 470
>gi|300697560|ref|YP_003748221.1| hypothetical protein RCFBP_mp20404 [Ralstonia solanacearum
CFBP2957]
gi|299074284|emb|CBJ53830.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 178
Score = 39.5 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 210 KITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMV--LSEGDYTVIARNKERNY 267
+ +LV+ GG+A++D A S++ A G A P + L G Y + A +
Sbjct: 71 NVRLRLVAARGGDALSDVAVSVVDARGRLRLRLVTAGPLLYLRLPPGVYRIHAEYRGAMR 130
Query: 268 S 268
+
Sbjct: 131 T 131
>gi|213963195|ref|ZP_03391452.1| HYR domain protein [Capnocytophaga sputigena Capno]
gi|213954057|gb|EEB65382.1| HYR domain protein [Capnocytophaga sputigena Capno]
Length = 4061
Score = 39.1 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 66/231 (28%), Gaps = 46/231 (19%)
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISA--SFGHVGVVKKITVSSKEKNQKQV 118
F ++ + FDL G Y+I + G + V + Q +V
Sbjct: 2185 FSPLTGSTPAANKIANNNEVD--FDLTKGTYIIQVEDANG-CTATATLEVPDAKPLQVEV 2241
Query: 119 FIL-------NAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLG 171
L N G ++L + G E FS + S L
Sbjct: 2242 LDLEPCFPGANGGRLQLKATSGNG------EYKFSKDGGATFENA--APNSNSYIFENLS 2293
Query: 172 TNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT-FKLVSEM---------GG 221
Y G + ID ++ + A + V+ GG
Sbjct: 2294 AGTYNFVIKDG-------ADCQTSTTYTIDNPLRIQVAPVNPLTCVANSEAEFKITYTGG 2346
Query: 222 EA---------VADTAWSILTASGDTVGESANASPSMVLSEGDYTVIARNK 263
+A T ++ +G T+ +S+N EGDY R +
Sbjct: 2347 KAGTREFLWSHTPTTGFTTAVGTGMTLSQSSNVFTFKTKVEGDYYFKVRYQ 2397
>gi|290959139|ref|YP_003490321.1| integral membrane transporter [Streptomyces scabiei 87.22]
gi|260648665|emb|CBG71778.1| putative integral membrane transport protein [Streptomyces scabiei
87.22]
Length = 801
Score = 39.1 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 76/235 (32%), Gaps = 41/235 (17%)
Query: 46 TENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLF---PGDY-LISASFGHVG 101
+ V + + G + + PG Y LI+A+ G
Sbjct: 559 GAEGVPVPRAVV------TLISLGGRQLGRSVAGADGIYTVDAPAPGSYVLIAAADGFQP 612
Query: 102 VVKKITVSSKEKNQKQVFILNAGGIRLYSIY---KPGSPIVDDELTFSIYSNPNHKALLI 158
+ V + IL +G L + GS + D + + + + ++
Sbjct: 613 QASTVVVGGEPVAYD---ILLSGTSGLSGVVRAAGAGSAVQDAMVVVT-----DVRGDVL 664
Query: 159 TDKVRS-------GTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGK--IIDVTIQNRAA 209
V G LV +T + VE G + + I A
Sbjct: 665 ASGVTGEQGEFGFGELV--PGG---VTVAVNAAGFRPRA-LPVEVGGTGVTRIEIDLEAG 718
Query: 210 KITFKLVSEMGGEAVADTAWSILTASGDTVGESA----NASPSMVLSEGDYTVIA 260
+V GG A+AD +++ A+G+ VG + A L G+YTVIA
Sbjct: 719 ARLQGVVRAPGG-ALADARVTLVDAAGNVVGTATTGTDGAYAFTDLDSGEYTVIA 772
>gi|116619297|ref|YP_821453.1| polymorphic membrane protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222459|gb|ABJ81168.1| polymorphic membrane protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 1970
Score = 39.1 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 64/195 (32%), Gaps = 29/195 (14%)
Query: 26 SKGKGKRVVDAQRITCEARLTENSTSIDSG-VSWHIF-DSISNKKNTLSTTKKIIGGKVS 83
S +Q + A +T ++++G V++ +F S + T +
Sbjct: 1268 SPASATFSASSQVVALSATVTSAGGTVNAGTVTFTVFNASSVQVGSATPGTVSGGSASAN 1327
Query: 84 FDLFPGD----YLISASFG-----HVGVVKKITV-------SSKEKNQKQVFILNAGGIR 127
F L G Y I AS+G + ++ N F + G+
Sbjct: 1328 FTLPAGTAAGTYSIHASYGGSGNFLASSDNTQNLTVNAAGTTTTAANATANFSASNQGVT 1387
Query: 128 LYSIY-KPGSPIVDDELTFSIYSNPNHKALLIT-----DKVRSGTLVRLG----TNNYQI 177
L + P + +TF+++++ + + + + L Y I
Sbjct: 1388 LSATVTSPSGTVSSGTVTFTVFNSLSVQVGVAATSGTVSSGNASASFTLPGGSAAGVYSI 1447
Query: 178 TSHY-GKYNAIVSTV 191
+ Y G N + S+
Sbjct: 1448 HATYNGTTNLLASSD 1462
>gi|222444708|ref|ZP_03607223.1| hypothetical protein METSMIALI_00321 [Methanobrevibacter smithii DSM
2375]
gi|222434273|gb|EEE41438.1| hypothetical protein METSMIALI_00321 [Methanobrevibacter smithii DSM
2375]
Length = 2536
Score = 38.7 bits (89), Expect = 0.92, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 84 FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVF-ILNAGGIRLYSIYKPGSPIVDDE 142
L PGDY+++A + V + V + V ++ ++ G+P+ + +
Sbjct: 2428 IKLRPGDYIVTAEYEGCRVSNNVKVLPTLVTKDLVMKYMDGSSFTAQTLDGQGNPLDNQK 2487
Query: 143 LTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
++F++ Y + + + +RL Y ITS + +Y
Sbjct: 2488 ISFNVNGVFYHRTTDENGMASLN------IRLNPGKYIITSIWNEY 2527
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 80/210 (38%), Gaps = 16/210 (7%)
Query: 76 KIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEKNQKQVFILNA---GGIRLYSI 131
+ ++ +L PG Y +SA++ G +S+ NA + L S
Sbjct: 2251 ESGMASMNINLNPGVYRVSAAYNGTAVNSTVTVMSTAVGCDIVKMFRNATQYSALFLDS- 2309
Query: 132 YKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGT----NNYQITSHYGKYNAI 187
G+P+ + + F+I + + + ++ + + + L NY + + N +
Sbjct: 2310 --NGNPLANAAVKFNI-NGVFYTKITNSEGIATLNIKLLPAEYIITNYNLVTGEENSNKV 2366
Query: 188 VSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVA-DTAWSILTASGDTVGESANAS 246
+ V+ +++ + +K T K++ + G A + +++I V +
Sbjct: 2367 TVKSLLVDNSELVKYYLNE--SKYTLKVIGKDGKVAAGQEVSFNINGVFYHRVSDENGIV 2424
Query: 247 PSMV-LSEGDYTVIARNKERNYSREFSVLT 275
+ L GDY V A + S VL
Sbjct: 2425 SLGIKLRPGDYIVTAEYEGCRVSNNVKVLP 2454
>gi|134103623|ref|YP_001109284.1| integral membrane transport protein [Saccharopolyspora erythraea
NRRL 2338]
gi|133916246|emb|CAM06359.1| integral membrane transport protein [Saccharopolyspora erythraea
NRRL 2338]
Length = 551
Score = 38.7 bits (89), Expect = 0.98, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 81/233 (34%), Gaps = 20/233 (8%)
Query: 38 RITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLF-PGDYLISAS 96
+ +T+ S + GV + DS + + G+ + G Y++ AS
Sbjct: 301 DLHLHGSVTDASGAPVEGVVLTLTDSSGRQAGR---VRTSGDGRYRLAVPHGGSYVLIAS 357
Query: 97 FGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKAL 156
G + V V + AGG+ + + G+ V + + +
Sbjct: 358 GGSYQPTASMVVIGDRPVAHDVRMFGAGGV--SGVVRAGAREVSGAMVLL----TDVRGE 411
Query: 157 LITDKV--RSGTLV--RLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKIT 212
+I G V L Y +T +T V V+ G+ + + + +A
Sbjct: 412 VIGSCATGEGGRYVFGGLVGGVYALTVT-ADGYRPTATSVHVDDGEQVQLDVALQAGTTL 470
Query: 213 FKLVSEMGGEA-VADTAWSILTASGDTVGESA----NASPSMVLSEGDYTVIA 260
+V G +A V D ++L G V + L EG+YTVIA
Sbjct: 471 SGVVRAPGLDAPVPDARVTLLDVDGVVVAAATTGADGGYEFTDLPEGEYTVIA 523
>gi|221200188|ref|ZP_03573231.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221206659|ref|ZP_03579671.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221173314|gb|EEE05749.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221180427|gb|EEE12831.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 146
Score = 38.7 bits (89), Expect = 1.00, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 15 HTTSTLLNNNISKGKGKRVVDAQRITCEA-----RLTENSTSIDSGVSWHIFDSISNKKN 69
T + +S G GK A A R T + V I + K
Sbjct: 37 EATQQGDISFVSGGIGKDQSTAFERNESAWPLALRFTGKGGEYLADVHVRI----VDGKG 92
Query: 70 TLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKE 112
G + L PG Y + AS+ + +TV +K
Sbjct: 93 NEVLKTDARGPYMLVKLPPGRYTVHASYQGSDETRAVTVGAKG 135
>gi|148643795|ref|YP_001274308.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148552812|gb|ABQ87940.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 1434
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITV-SSKEKNQKQVFILNAGGIRLYSIY--KPGS 136
++ +L PG Y+I+ +G V +TV + + + ++ L+ G + G+
Sbjct: 1322 ASLAINLRPGKYVITTMYGQYDVGNNVTVLPTLQTSDLKMKYLD--GSAFNARVVDGQGN 1379
Query: 137 PIVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYG 182
P+ + +TF++ Y+ + + + +RL Y ITS Y
Sbjct: 1380 PLANQIVTFNVNGVFYNKVTNDEGIASLN------IRLMKGEYIITSIYN 1423
>gi|222444773|ref|ZP_03607288.1| hypothetical protein METSMIALI_00386 [Methanobrevibacter smithii DSM
2375]
gi|222434338|gb|EEE41503.1| hypothetical protein METSMIALI_00386 [Methanobrevibacter smithii DSM
2375]
Length = 1434
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITV-SSKEKNQKQVFILNAGGIRLYSIY--KPGS 136
++ +L PG Y+I+ +G V +TV + + + ++ L+ G + G+
Sbjct: 1322 ASLAINLRPGKYVITTMYGQYDVGNNVTVLPTLQTSDLKMKYLD--GSAFNARVVDGQGN 1379
Query: 137 PIVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYG 182
P+ + +TF++ Y+ + + + +RL Y ITS Y
Sbjct: 1380 PLANQIVTFNVNGVFYNKVTNDEGIASLN------IRLMKGEYIITSIYN 1423
>gi|288869652|ref|ZP_05975450.2| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374]
gi|288860819|gb|EFC93117.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374]
Length = 2101
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 66 NKKNTLSTTKKIIGGKV--SFDLFPGDYLISA--SFGHVGVVKKITVSSKEKNQKQVFIL 121
N L T + G + +L PG+Y+++A S G V KK+TV +
Sbjct: 1970 NINGVLYTRETDGDGVAKLNINLNPGEYILTAIHSDGL-QVGKKVTVLPTLEGSDLTMNY 2028
Query: 122 NAGGIRLYSIY--KPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITS 179
G + + G + ++ +TF+I + + + + V S + L Y ITS
Sbjct: 2029 RDGS-QFKARLVDGTGRALANETVTFNI-NGVFYNKITDVNGVASLN-INLMAGKYIITS 2085
Query: 180 HYGKY 184
YG Y
Sbjct: 2086 VYGSY 2090
>gi|251771959|gb|EES52531.1| putative TonB-dependent receptor [Leptospirillum ferrodiazotrophum]
Length = 956
Score = 38.4 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 35/166 (21%)
Query: 85 DLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELT 144
+L PGDY + G V KK + + F +N+ GS E+T
Sbjct: 94 NLPPGDYKVRVGGGRFSVQKKEGILKSGTIGEMDFAVNS--------LSGGS----SEVT 141
Query: 145 FSIYSNPNHKALLITDKVR---------------SGTLVRL---GTNNYQI-TSHYGKYN 185
S+Y + + + RL + NY I S G
Sbjct: 142 GSVYEGHGDRKEPLVANLAIKNMKTKEVYQVASLPNGHFRLQSIPSGNYLIQVSKRGYLP 201
Query: 186 AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSI 231
S + V GK + I+ R ++ + G + + DT +I
Sbjct: 202 --FSQEIAV-AGKTSE-RIRLRINRLARASIRATGDKKIRDTTGAI 243
>gi|220931268|ref|YP_002508176.1| Cna B domain protein [Halothermothrix orenii H 168]
gi|219992578|gb|ACL69181.1| Cna B domain protein [Halothermothrix orenii H 168]
Length = 609
Score = 38.4 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 74 TKKIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYS-I 131
G FDL GDY I+ S G+ V + +T++ +K +A + S
Sbjct: 403 IVTDANGVAQFDLVDGDYTINVSANGYNTVSQDVTIAGADKTVDISLTTDAPSLFNSSFT 462
Query: 132 YKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGT 166
+PI + ++ + + + G
Sbjct: 463 VFNEAPITALQASYEVSTTEITEGDSSIKVTYPGD 497
>gi|153003272|ref|YP_001377597.1| hypothetical protein Anae109_0398 [Anaeromyxobacter sp. Fw109-5]
gi|152026845|gb|ABS24613.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5]
Length = 773
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 63/212 (29%), Gaps = 30/212 (14%)
Query: 74 TKKIIGGKVSFDLFPGDY-LISASFGHVGVVKKITVSSKEKNQKQVFILN---AGGIRLY 129
G L PG Y L +A+ G V++ +Q F L+ AG +
Sbjct: 365 VASEEGRYRLAPLAPGQYDLRAAAAGRSPAVQR----GVTLAARQTFPLDVALAGTGTIE 420
Query: 130 SIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITS-HYGKYNAIV 188
+ + + A + + RS Y+I G+ +
Sbjct: 421 GAVADARGGPLAGARVRVEARGDGLAGALPLEARSDF-----EGRYRIEGVEVGRAELVA 475
Query: 189 STV---------VKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADT---AWSILTASG 236
V+V PG A + VS+ GG A T A + +G
Sbjct: 476 RQDGVALGVSRAVRVAPGSTARADFSLPEAGVLAGRVSQAGGTAPVGTAVVAVPLKAGAG 535
Query: 237 DTVGESANASP----SMVLSEGDYTVIARNKE 264
A A + L G+Y V A +
Sbjct: 536 TPQRARAVADARGTYRLALPAGEYRVHAAPGD 567
>gi|329736012|gb|EGG72287.1| hypothetical protein SEVCU045_1457 [Staphylococcus epidermidis
VCU045]
Length = 888
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 172 TNNYQITSHYGKY-NAI---VSTVVKVEPGKIIDV-TIQNRAAKITFKLVSEMGGEAVAD 226
NY + + YG NA + + G + ++ +A I +L G A+ D
Sbjct: 670 PGNYHVVAGYGSSGNASTSNIKFDLSTYSGNLTLAGQLKQDSADIA-ELFESQNGLAI-D 727
Query: 227 TAWSILTASGDTVGESANASPSMVLSEGDYTVIAR-----NKERNYSREFSVLTGKSTIV 281
+I+T GD + ++ + + G ++A +K+R E+ V V
Sbjct: 728 LG-TIVTLDGDKIRKAQPNDTPIGVISGTAALVANEKTFHHKDRFLKNEYGVTITNRKQV 786
Query: 282 EVLMRQKRM 290
E + + +
Sbjct: 787 EFVDDEGNV 795
>gi|119953698|ref|YP_950618.1| putative phage pre-neck appendage protein [Staphylococcus phage
CNPH82]
gi|112361325|gb|ABI15697.1| putative phage pre-neck appendage protein [Staphylococcus phage
CNPH82]
Length = 888
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 172 TNNYQITSHYGKY-NAI---VSTVVKVEPGKIIDV-TIQNRAAKITFKLVSEMGGEAVAD 226
NY + + YG NA + + G + ++ +A I +L G A+ D
Sbjct: 670 PGNYHVVAGYGSSGNASTSNIKFDLSTYSGNLTLAGQLKQDSADIA-ELFESQNGLAI-D 727
Query: 227 TAWSILTASGDTVGESANASPSMVLSEGDYTVIAR-----NKERNYSREFSVLTGKSTIV 281
+I+T GD + ++ + + G ++A +K+R E+ V V
Sbjct: 728 LG-TIVTLDGDKIRKAQPNDTPIGVISGTAALVANEKTFHHKDRFLKNEYGVTITNRKQV 786
Query: 282 EVLMRQKRM 290
E + + +
Sbjct: 787 EFVDDEGNV 795
>gi|148642326|ref|YP_001272839.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148551343|gb|ABQ86471.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 2065
Score = 38.0 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 84 FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVF-ILNAGGIRLYSIYKPGSPIVDDE 142
L PG Y+++A + V ITV ++ L+ ++ G + +
Sbjct: 1957 IKLRPGTYIVTAEYEGCRVSNSITVLPTLITKELDMKYLDGSNFTAKTLDGQGKALANQN 2016
Query: 143 LTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
++F++ Y + + + +RL Y ITS + +Y
Sbjct: 2017 VSFNVNGVFYHKTTDENGI------ANLNIRLNPGKYIITSIWNEY 2056
>gi|134296821|ref|YP_001120556.1| hypothetical protein Bcep1808_2730 [Burkholderia vietnamiensis G4]
gi|134139978|gb|ABO55721.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length = 145
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Query: 41 CEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHV 100
R T + V I + K G + L PG Y + AS+
Sbjct: 67 LALRFTGKGGEYLADVHVRI----VDAKGAEVLRTDARGPYMLVKLPPGRYTVHASYQGS 122
Query: 101 GVVKKITVSSKEKN 114
+ +TV +K
Sbjct: 123 DESRAVTVGAKGGT 136
>gi|312797147|ref|YP_004030069.1| hypothetical protein RBRH_01300 [Burkholderia rhizoxinica HKI 454]
gi|312168922|emb|CBW75925.1| Hypothetical protein RBRH_01300 [Burkholderia rhizoxinica HKI 454]
Length = 163
Score = 38.0 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 222 EAVADTAWSILTASGDTVGESANASPSMV--LSEGDYTVIARNKERNYSREFSVL 274
E +AD +I A G +V ++ + P M+ L+ G YTV A+ ++ ++ +
Sbjct: 97 EYLADVQVTITRAGGQSVLDTISQGPYMLVKLAPGRYTVRAQYEDTAQTKSIKLE 151
>gi|313607492|gb|EFR83820.1| peptidoglycan binding protein [Listeria monocytogenes FSL F2-208]
Length = 1706
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 31/239 (12%)
Query: 74 TKKIIGGKVSF-DLFPGDY-LISA----SFGHVGVVKKITVSSKEKNQKQVFILN---AG 124
G++ +L PGDY L+ + T++ + + V LN AG
Sbjct: 1233 IATNAAGQLEITNLAPGDYQLVETEAPTGYELDEAPIPFTITFNQSEKVNVVKLNKAKAG 1292
Query: 125 GIRL---YSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
+ L + K G + EL S + + LITD L L NYQ+
Sbjct: 1293 SVVLTKQDDVTKAGLADAEFELQDS--AGTKLRENLITDTAGKLELTNLAPGNYQLVETA 1350
Query: 182 GKYNAIVSTV---VKVE--PGKIIDVTIQNRAAKITFKLVSEMG--GEAVADTAWSILTA 234
++ VE +++ +T +N A + L + G+ +++ + +
Sbjct: 1351 APIGYVLDATPVTFTVEFNQTELLSLTKENTAKTGSVVLTKQDSLTGQTLSEAEFELQDE 1410
Query: 235 SGDTVGESA-----NASPSMVLSEGDYTVIARNKERNYSRE-----FSVLTGKSTIVEV 283
+G + E L+ G Y ++ + Y + F++ + + V
Sbjct: 1411 TGAILQEKLITDANGELEITNLAPGKYQLVEKKAPTGYQLDNTPVPFTIEFNQVEPIHV 1469
>gi|148643176|ref|YP_001273689.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148552193|gb|ABQ87321.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 1491
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 7/120 (5%)
Query: 66 NKKNTLSTTKKIIGGKVS--FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA 123
N T G + L PGDY+++A + V KITV + N
Sbjct: 1362 NINGVFYTKTTDANGVATLGIGLLPGDYIVTAIYKDCMVSNKITVKNVMFTDNLDMKYND 1421
Query: 124 GGIRLYSIY--KPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
G + + G P + +TF++ N + + +RL + Y ITS +
Sbjct: 1422 GS-KFTATLIDGQGKPYANQNITFNV--NGVFYNKVTDSNGIASLGIRLLSGKYIITSIW 1478
>gi|320353550|ref|YP_004194889.1| Cna B domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122052|gb|ADW17598.1| Cna B domain protein [Desulfobulbus propionicus DSM 2032]
Length = 623
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 10/164 (6%)
Query: 63 SISNKKNTLS-TTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKI-TVSSKEKNQKQVFI 120
+IS+ + GG F L G Y A+ G V + I TV + +
Sbjct: 2 AISDIDPDHPQSLTTDAGGVAEFRLPAGSYTFKATLGE-TVYQGIGTVLADQTTN---VT 57
Query: 121 LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSG-TLVRLGTNNYQITS 179
LN G L + V + S+Y+ SG + Y + +
Sbjct: 58 LNLGASTLAITVRTDETTVLPGVVCSLYTAEGEPLNRSATTDGSGVASFAVEAGTYMVQA 117
Query: 180 HYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEA 223
Y Y+ + +E ++ ++ + ++ + G A
Sbjct: 118 RYLGYDFTLEA---IETPTVLAASLTIPHRDLAVRVFKDQGNGA 158
>gi|238028501|ref|YP_002912732.1| hypothetical protein bglu_1g29650 [Burkholderia glumae BGR1]
gi|237877695|gb|ACR30028.1| Hypothetical protein bglu_1g29650 [Burkholderia glumae BGR1]
Length = 142
Score = 38.0 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 199 IIDVTIQNRAA---KITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMV--LSE 253
+ + T RA ++ + + GGE +A SI+ GD V ++ P M+ L+
Sbjct: 49 LDESTAFQRAEHHWPLSLRFTGQ-GGEFLAGVHVSIVGHGGDEVLKADTRGPYMLVRLAP 107
Query: 254 GDYTVIARNKERNYSREFSVLT 275
G Y V A + +R SV
Sbjct: 108 GSYKVSASYNGKTETRSVSVPA 129
>gi|148643769|ref|YP_001274282.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148552786|gb|ABQ87914.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 748
Score = 38.0 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 48/124 (38%), Gaps = 12/124 (9%)
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEKNQKQVF 119
+ I++ +S + +L PG+Y+I+ + G + + + +
Sbjct: 626 YTKITDSNGVVSL---------AINLRPGEYIITTMYEGLAVGNNIVVLPTLVTRDLNMT 676
Query: 120 ILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITS 179
+ ++ G P+ + +TF+I N + D + +RL + Y ITS
Sbjct: 677 YGDGSNFTAQTLDGQGKPLANQNVTFNI--NGVFYNKVTNDNGVASLTMRLMSGKYIITS 734
Query: 180 HYGK 183
++
Sbjct: 735 YWND 738
>gi|269795948|ref|YP_003315403.1| hypothetical protein Sked_26650 [Sanguibacter keddieii DSM 10542]
gi|269098133|gb|ACZ22569.1| hypothetical protein Sked_26650 [Sanguibacter keddieii DSM 10542]
Length = 845
Score = 38.0 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 91/290 (31%), Gaps = 38/290 (13%)
Query: 24 NISKGKGKRVVDAQRI----TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIG 79
+++ G+ + ++ + + ++ S + + + + T
Sbjct: 464 DVAAGEDRAGLEVSLLEGDGSISGLVSSASGPVPGATVVATY-----GQGVVQTVSLTQD 518
Query: 80 GKVSFDL----FPGDYLISASF-GHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKP 134
SF L P + + S G+ + ++ ++ +L L
Sbjct: 519 DVGSFVLRGLQTPATFTVVVSAPGYASATLSVNLAEAQELTGLSVVLGQSAGTLSGQVTV 578
Query: 135 GSPIVDDELTFSIYSNPNHKALLITDKVRSGTL----VRLGTNNYQITSHYGKYNAIVST 190
+ + ++ + + +G+ + L Y +T + V +
Sbjct: 579 PAGTSAAGVAVTVSDGAVTRQTVTRSSDPAGSWSLGGLPLPA-TYTVTFSRADLESQVVS 637
Query: 191 VV-----KVEPGKIIDVTIQNRAAKITFKLVSEMGG------------EAVADTAWSILT 233
V V G +DVT++ +IT + G A + T+ ++
Sbjct: 638 VTVDGNGAVSTGGPVDVTLRAATGRITGVVTQTAVGSEESGPAGNVQVTAASGTS-TLSV 696
Query: 234 ASGDTVGESANASPSMVLSEGDYTVIARNKERNYSREF-SVLTGKSTIVE 282
S T ES A ++ G YTV K + +V G++ +
Sbjct: 697 TSASTPQESVGAFVLENVAPGTYTVTFSRKGTRPTSSIVTVTAGQTVELN 746
>gi|261350031|ref|ZP_05975448.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374]
gi|288860817|gb|EFC93115.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374]
Length = 1491
Score = 37.6 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 7/120 (5%)
Query: 66 NKKNTLSTTKKIIGGKVS--FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA 123
N T G + L PGDY+++A + V KITV + N
Sbjct: 1362 NINGVFYTKTTDANGVATLGIGLLPGDYIVTAIYKDCMVSNKITVKNVMFTDNLDMKYND 1421
Query: 124 GGIRLYSIY--KPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
G + + G P + +TF++ N + + +RL + Y ITS +
Sbjct: 1422 GS-KFTATLIDGQGKPYANQNVTFNV--NGVFYNKVTDSNGIASLGIRLLSGKYIITSIW 1478
>gi|222444801|ref|ZP_03607316.1| hypothetical protein METSMIALI_00414 [Methanobrevibacter smithii
DSM 2375]
gi|222434366|gb|EEE41531.1| hypothetical protein METSMIALI_00414 [Methanobrevibacter smithii
DSM 2375]
Length = 795
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEKNQKQVF 119
+ ++ +S + +L PG+Y+I+ + G + + + +
Sbjct: 673 YTKTTDSNGVVSL---------AINLRPGEYIITTMYEGLAVGNNIVVLPTLVTCDLNMT 723
Query: 120 ILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITS 179
+ ++ G P+ + +TF+I N + D + +RL + Y ITS
Sbjct: 724 YGDGSNFTAQTLDGQGKPLANQNVTFNI--NGVFYNKVTNDNGVASLTMRLMSGKYIITS 781
Query: 180 HYGK 183
++
Sbjct: 782 YWND 785
>gi|307328311|ref|ZP_07607488.1| NHL repeat containing protein [Streptomyces violaceusniger Tu 4113]
gi|306886015|gb|EFN17024.1| NHL repeat containing protein [Streptomyces violaceusniger Tu 4113]
Length = 555
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 8/107 (7%)
Query: 13 NMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENS----TSIDSGVSWHIFDSISNKK 68
M L+ G + D + +L + + W I
Sbjct: 131 EMKMNGRLMELFPGGGDPAVLTDGLALGNAMQLGPDGCLYYPQMMRNQVWRI----PPDG 186
Query: 69 NTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQ 115
+ + V+ G L+ S G G+V +I +++ +
Sbjct: 187 GVPELVAEEVDDPVAVRFDRGGVLVVLSRGRAGLVTRIDLNTGARMV 233
>gi|218506315|ref|ZP_03504193.1| hypothetical protein RetlB5_01272 [Rhizobium etli Brasil 5]
Length = 69
Score = 37.6 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 270 EFSVLTGKSTIVEVLMRQKRMDKNG 294
+F+V+ GK+T VEVLM+ ++ +
Sbjct: 1 DFTVVAGKNTDVEVLMKDQQPQQPA 25
>gi|183983583|ref|YP_001851874.1| ATP-dependent exoDNAse (exonuclease V) [Mycobacterium marinum M]
gi|183176909|gb|ACC42019.1| ATP-dependent exodnase (exonuclease V) [Mycobacterium marinum M]
Length = 934
Score = 37.6 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 47 ENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYL-ISASFGHVGVVK 104
+ + + +G W I+ N ++ + G + +F GDYL ++G+ V
Sbjct: 727 KGADPVRNGNRWRIYAVDPG-NNRVAARRLHDGARAAFT---GDYLREHITYGYAITVH 781
>gi|261350626|ref|ZP_05976043.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
gi|288861409|gb|EFC93707.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
Length = 795
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASF-GHVGVVKKITVSSKEKNQKQVF 119
+ ++ +S + +L PG+Y+I+ + G + + + +
Sbjct: 673 YTKTTDSNGVVSL---------AINLRPGEYIITTMYEGLAVGNNIVVLPTLVTRDLNMT 723
Query: 120 ILNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITS 179
+ ++ G P+ + +TF+I N + D + +RL + Y ITS
Sbjct: 724 YGDGSNFTAQTLDGQGKPLANQNVTFNI--NGVFYNKVTNDNGVASLTMRLMSGKYIITS 781
Query: 180 HYGK 183
++
Sbjct: 782 YWND 785
>gi|148555683|ref|YP_001263265.1| membrane-bound proton-translocating pyrophosphatase [Sphingomonas
wittichii RW1]
gi|148500873|gb|ABQ69127.1| V-type H(+)-translocating pyrophosphatase [Sphingomonas wittichii
RW1]
Length = 700
Score = 37.6 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 6/111 (5%)
Query: 178 TSHYGKYNAIVSTVVKV-EPGKII---DVTIQNRAAKITFKLVSEMGGEAVADTAWSILT 233
+ Y N V V+ E + +T+ RA +T LV+ + A+A W +
Sbjct: 89 VAGYVGMNISVRANVRTAEAARASLQSGLTVAFRAGAVTGVLVAGLALLAIAVFYWYLTG 148
Query: 234 ASGDTVGESANASPSMVLSEGD--YTVIARNKERNYSREFSVLTGKSTIVE 282
G E + L+ G ++ AR +++ V VE
Sbjct: 149 PGGHAPNERIVIDALVALAFGASLISIFARLGGGIFTKAADVGADLVGKVE 199
>gi|330818166|ref|YP_004361871.1| hypothetical protein bgla_1g33090 [Burkholderia gladioli BSR3]
gi|327370559|gb|AEA61915.1| hypothetical protein bgla_1g33090 [Burkholderia gladioli BSR3]
Length = 139
Score = 37.6 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 219 MGGEAVADTAWSILTASGDTVG-ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGK 277
GGE ++ SI+ G+ + ++ + L+ G Y V A + R +V
Sbjct: 69 AGGEYLSGVHVSIMGHDGEVLKADTRGPYMLVRLAPGAYKVSANYNGKTEMRNVTVPAKG 128
Query: 278 S 278
Sbjct: 129 D 129
>gi|320449696|ref|YP_004201792.1| tetratricopeptide repeat domain-containing protein [Thermus
scotoductus SA-01]
gi|320149865|gb|ADW21243.1| tetratricopeptide repeat domain protein [Thermus scotoductus SA-01]
Length = 631
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 32/94 (34%), Gaps = 11/94 (11%)
Query: 72 STTKKIIGGKVSFDLF-PGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYS 130
T + + L PG Y++ +G + + V + +K L A G+ +
Sbjct: 478 PLTAALEEVAPAVSLPEPGRYVLEVRYGEAQALIPLEVGPESLARK----LYALGLEVRD 533
Query: 131 IYKPGSPIVDDELTFSIYSNPNHKALLITDKVRS 164
+ + L P+ LL+ + +
Sbjct: 534 LSGNLLLTPKETL------GPDGDRLLLERTLEA 561
>gi|323529375|ref|YP_004231527.1| alpha-2-macroglobulin domain-containing protein 2 [Burkholderia sp.
CCGE1001]
gi|323386377|gb|ADX58467.1| alpha-2-macroglobulin domain protein 2 [Burkholderia sp. CCGE1001]
Length = 1602
Score = 37.6 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 66/217 (30%), Gaps = 28/217 (12%)
Query: 82 VSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDD 141
L PG Y++ A G+ + VS K ++G + + G P+
Sbjct: 255 PVGKLPPGLYIVEAVIGNYRAHTLLFVSDTVAVVKAA---SSGMLVWTTRRDNGKPVAST 311
Query: 142 ELTFSIYSN------PNHKALLITDKVRSGTLVRL---GTNNYQITSH-YGK---YNAIV 188
E+ ++ L+ V L ++ + Y YN +
Sbjct: 312 EVNWTDGVGVLQSGTTGSDGALVLQHVSPERSYVLGVDPAGGVFVSENFYYDSEIYNTKI 371
Query: 189 STVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGES------ 242
V + D + + TF+ ++ A AD +L +G V +
Sbjct: 372 YAVTDRPMYRPGDA-VHVKFIGRTFQNATQSSAPAEADIKLEVLDPNGSPVSTTKTHFAS 430
Query: 243 -ANASPSMVL----SEGDYTVIARNKERNYSREFSVL 274
A S L + G YT+ Y F V
Sbjct: 431 DTGADTSFSLPADATAGGYTLRFDYNGDVYGSAFRVA 467
>gi|229816037|ref|ZP_04446358.1| hypothetical protein COLINT_03090 [Collinsella intestinalis DSM
13280]
gi|229808351|gb|EEP44132.1| hypothetical protein COLINT_03090 [Collinsella intestinalis DSM
13280]
Length = 1192
Score = 37.2 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 20/115 (17%)
Query: 51 SIDSGVS-----WHIFD-----SISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHV 100
I SGV +F S + K + I +V+F PGDY++ A+ G
Sbjct: 466 PIPSGVVVPSAHLAVFSLADLNSRMDGKRGRPRRRVDI-TEVTFPFKPGDYVVHATHGIA 524
Query: 101 GVVKKITVSSKEKNQKQVFILN-AGGIRLYSIYKPGSPIVDDELTFSIYSNPNHK 154
+ +I ++ F+L AGG +LY + I Y P+
Sbjct: 525 -LFSEIVRQEVGGKERDYFMLEYAGGDKLYVPLEQVDRITR-------YVGPDGD 571
>gi|148643173|ref|YP_001273686.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148552190|gb|ABQ87318.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 2101
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 66 NKKNTLSTTKKIIGGKV--SFDLFPGDYLISASF--GHVGVVKKITVSSKEKNQKQVFIL 121
N L T + G + +L PG+Y+++A G V KK+TV +
Sbjct: 1970 NINGVLYTRETGGDGVAKLNINLNPGEYILTAIHPDGL-QVGKKVTVLPTLEGSDLTMNY 2028
Query: 122 NAGGIRLYSIY--KPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITS 179
G + + G + ++ +TF+I + + + + V S + L Y ITS
Sbjct: 2029 RDGS-QFKARLVDGTGRALANETVTFNI-NGVFYNKITDVNGVASLN-INLMAGKYIITS 2085
Query: 180 HYGKY 184
YG Y
Sbjct: 2086 VYGSY 2090
>gi|330470017|ref|YP_004407760.1| methyltransferase [Verrucosispora maris AB-18-032]
gi|328812988|gb|AEB47160.1| methyltransferase [Verrucosispora maris AB-18-032]
Length = 244
Score = 37.2 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 56/178 (31%), Gaps = 34/178 (19%)
Query: 44 RLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVG-- 101
RL ++ + SG+ + + + GG +L G G V
Sbjct: 12 RLWADTYDLPSGL--------PDPALAVEFLAEKSGGGRVLELAIGT-------GRVALP 56
Query: 102 -VVKKITVSSKEKNQKQVFILNA--GGIRLYSIYKPGSPIV---DDELTFSIYS------ 149
+ +TV E + + V L A GG L + + + + I++
Sbjct: 57 LAARGVTVEGVEASPEMVAKLRAKPGGADLPVAIGDMADVPVNGPYAMAYLIFNTLFNLV 116
Query: 150 NPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEPGKIIDVTIQNR 207
+A + R L + Y A +V+P I + +++ R
Sbjct: 117 REQRQADCFRNVAR-----VLAPGGAFVVETYVPNAADFDRDEQVQPYSITEDSVRIR 169
>gi|255012026|ref|ZP_05284152.1| TonB-dependent outer membrane protein [Bacteroides fragilis 3_1_12]
gi|313149863|ref|ZP_07812056.1| TonB-dependent receptor [Bacteroides fragilis 3_1_12]
gi|313138630|gb|EFR55990.1| TonB-dependent receptor [Bacteroides fragilis 3_1_12]
Length = 920
Score = 37.2 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 85 DLFPGDYLISASF-GHVGVVKKITVSSKEKNQKQVFILNAG 124
+L PG Y + S+ G+ V KIT+ + ++ V ILN G
Sbjct: 73 NLNPGTYTVKVSYVGYAPVEMKITIPEGKTLERDV-ILNEG 112
>gi|261350753|ref|ZP_05976170.1| chlamydial polymorphic outer membrane protein repeat-containing
domain protein [Methanobrevibacter smithii DSM 2374]
gi|288860508|gb|EFC92806.1| chlamydial polymorphic outer membrane protein repeat-containing
domain protein [Methanobrevibacter smithii DSM 2374]
Length = 2536
Score = 37.2 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 11/106 (10%)
Query: 84 FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVF-ILNAGGIRLYSIYKPGSPIVDDE 142
L PG Y+++A + V ITV + L+ ++ G +
Sbjct: 2428 IKLRPGTYIVTAEYEGCWVSNNITVLPTLITKDLDMKYLDGSNFTAQTLDGQGKALAKQN 2487
Query: 143 LTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
++F++ Y + + + +RL Y ITS + +Y
Sbjct: 2488 ISFNVNGVFYHKTTDENGI------ANLNIRLNPGKYIITSIWNEY 2527
>gi|83592437|ref|YP_426189.1| hypothetical protein Rru_A1101 [Rhodospirillum rubrum ATCC 11170]
gi|83575351|gb|ABC21902.1| hypothetical protein Rru_A1101 [Rhodospirillum rubrum ATCC 11170]
Length = 688
Score = 37.2 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 60/212 (28%), Gaps = 44/212 (20%)
Query: 40 TCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPG---------- 89
T +TE++ + I + + L PG
Sbjct: 385 TLMVPITESAIPLR-----RIAHYRPGESGRHPLAAVDLTNATGTALPPGAVSLTQATSG 439
Query: 90 --DYLISASFG---------HVGVV-KKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSP 137
YL A G V + ITV + + V G+ +
Sbjct: 440 GLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV-----SGLTASAGVLTLRQ 494
Query: 138 IVDDELTFSIYSNPNHKALLITD-KVRSGTLVRLGTNNYQITSHYGKYNAIVSTVVKVEP 196
+ + T+++ +N + L+ D R G ++ G + V +E
Sbjct: 495 VARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGT-DTVEEIGDAH---RLSVTLEA 550
Query: 197 GKIIDVTIQNRAAKITFKLVSEMGGEAVADTA 228
G Q RA I + E A A TA
Sbjct: 551 G-------QTRALTIVLERPIEERLSAGALTA 575
>gi|148642112|ref|YP_001272625.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148551129|gb|ABQ86257.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 2530
Score = 36.8 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 11/106 (10%)
Query: 84 FDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVF-ILNAGGIRLYSIYKPGSPIVDDE 142
L PG Y+++A + V ITV + L+ ++ G +
Sbjct: 2422 IKLRPGTYIVTAEYEGCWVSNNITVLPTLITKDLDMKYLDGSNFTAQTLDGQGKALAKQN 2481
Query: 143 LTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
++F++ Y + + + +RL Y ITS + +Y
Sbjct: 2482 ISFNVNGVFYHKTTDENGI------ANLNIRLNPGKYIITSIWNEY 2521
>gi|307726414|ref|YP_003909627.1| alpha-2-macroglobulin domain-containing protein [Burkholderia sp.
CCGE1003]
gi|307586939|gb|ADN60336.1| alpha-2-macroglobulin domain protein [Burkholderia sp. CCGE1003]
Length = 1606
Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 67/217 (30%), Gaps = 28/217 (12%)
Query: 82 VSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDD 141
L PG Y++ A G+ + VS K +G + + G P+ +
Sbjct: 254 PVGKLPPGLYIVEAVIGNYRAHTLLFVSDTVAVVKAA---ASGMLVWTTRRDSGKPVANT 310
Query: 142 ELTFSIYSN------PNHKALLITDKVRSGTLVRL---GTNNYQITSH-YGK---YNAIV 188
E+ ++ + L+ V L ++ + Y YN +
Sbjct: 311 EINWTDGVGVLQSGATGNDGALVLQHVSPERSYVLGVDPQGGVFVSENFYYDSEIYNTKI 370
Query: 189 STVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGES------ 242
V + D + + TF+ ++ A AD +L +G V +
Sbjct: 371 YAVTDRPMYRPGDA-VHVKFIGRTFQNATQSSAPAEADIKLEVLDPNGSPVATTKMHFAS 429
Query: 243 -ANASPSMVL----SEGDYTVIARNKERNYSREFSVL 274
A S L + G YT+ Y F V
Sbjct: 430 DTGADTSFTLPADATAGGYTLRFDYNGDVYGSAFRVA 466
>gi|55981843|ref|YP_145140.1| hypothetical protein TTHA1874 [Thermus thermophilus HB8]
gi|55773256|dbj|BAD71697.1| hypothetical protein [Thermus thermophilus HB8]
Length = 954
Score = 36.8 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 76/224 (33%), Gaps = 34/224 (15%)
Query: 76 KIIGGKVSFDLFPGDYLISAS---FGHVGVVKKITVSSKEKNQKQVFILNA-----GGIR 127
GGK +L PG Y + AS + ++ + + A G +
Sbjct: 107 SFTGGKTLTNLEPGSYTVQASKTGYFPAQATHQVEAGKTTTVVLNLLPVPAASPTEGKVA 166
Query: 128 LYSIYKPGSPIVDDELT---FSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKY 184
+ + G+PI ++ S ++ +A L + + + + G
Sbjct: 167 VLVVNGNGAPISGATVSDGTNSATTDAQGRADLTYTTAGAYAISVNKSG------YLGDA 220
Query: 185 NAIVSTVVKVEPGKIIDVTIQNR----AAKITFKLVSEMGGEAVADTAWSI----LTASG 236
VE GK++ +T + + A T LV + G ADT ++ +++
Sbjct: 221 KLA-----SVELGKVVALTFKLQPEPAPAPTTGTLVVHVYG---ADTGQTLSGASVSSDP 272
Query: 237 DTVGESANASPSMVLSEGDYTVIARNKERNY-SREFSVLTGKST 279
+ + + G Y V A SR V GK+T
Sbjct: 273 SLTFSGSGGLFTATAAPGTYAVTASAPGYLSGSRAAQVEAGKTT 316
>gi|229147898|ref|ZP_04276239.1| Lpxtg-motif cell wall anchor domain protein [Bacillus cereus
BDRD-ST24]
gi|228635548|gb|EEK92037.1| Lpxtg-motif cell wall anchor domain protein [Bacillus cereus
BDRD-ST24]
Length = 2216
Score = 36.8 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 84/253 (33%), Gaps = 33/253 (13%)
Query: 63 SISNKKNTLSTTKKIIGGKVSFDLFPGDY-LISAS----FGHVGVVKKITVSSKEKNQKQ 117
++ K+ + G DL PGDY I + T+ + +
Sbjct: 1126 DMNGKEVHTNLVTDKNGKISVSDLRPGDYQFIETKAPEHYVLDETTIPFTIERSQTKEIN 1185
Query: 118 VFILNA---GGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGT-----LVR 169
V NA G + L I I +L ++++ + L+ + +++ +
Sbjct: 1186 VTGKNALKNGSVELTKI--DDIDINT-KLANAVFNLLDADGELVKEGLKTNDEGKIVVEN 1242
Query: 170 LGTNNYQITSHYG------KYNAIVSTVVKVEPGKI-IDVTIQNRAAKITFKLVSEMGGE 222
L YQ IV T+ K + + + T +T V ++ G
Sbjct: 1243 LRPGTYQFVETIAPEHYDLDKRPIVFTIKKSQTETLHVTATNTLTKGAVTLSKVDDVDGT 1302
Query: 223 AVADTAWSILTASGDTVGESA-----NASPSMVLSEGDYTVIARNKERNYSRE-----FS 272
+ D + I+ +GD V + L GDY I ++Y + F+
Sbjct: 1303 VLKDAVFKIVNMNGDVVHKDLVTNEQGIIEINDLRPGDYQFIETKAPKHYVLDETPIKFT 1362
Query: 273 VLTGKSTIVEVLM 285
+ G+ + +
Sbjct: 1363 IEKGQKKAISLTA 1375
>gi|325528706|gb|EGD05780.1| hypothetical protein B1M_04701 [Burkholderia sp. TJI49]
Length = 145
Score = 36.8 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Query: 41 CEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHV 100
R T S V I + K G + L PG Y + AS+
Sbjct: 67 LALRFTGKGGEFLSDVHVRI----VDGKGAELLKTDARGPYMLVKLPPGRYTVHASYQGN 122
Query: 101 GVVKKITVSSKE 112
+ +TV +K
Sbjct: 123 DESRAVTVGAKG 134
>gi|288869742|ref|ZP_05976071.2| chlamydial polymorphic outer membrane protein repeat-containing
domain protein [Methanobrevibacter smithii DSM 2374]
gi|288861436|gb|EFC93734.1| chlamydial polymorphic outer membrane protein repeat-containing
domain protein [Methanobrevibacter smithii DSM 2374]
Length = 1434
Score = 36.8 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITV-SSKEKNQKQVFILNAGGIRLYSIY--KPGS 136
++ +L PG Y+I+ +G V +TV + + + ++ L+ G + G+
Sbjct: 1322 ASLAINLRPGKYVITTMYGQYDVGNNVTVLPTLQTSDLKMKYLD--GSAFNARVVDGQGN 1379
Query: 137 PIVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYG 182
P+ + +TF++ Y+ + + + +RL Y ITS Y
Sbjct: 1380 PLANKIVTFNVNGVFYNKVTNNEGIASLN------IRLMKGEYIITSIYN 1423
>gi|254247344|ref|ZP_04940665.1| hypothetical protein BCPG_02137 [Burkholderia cenocepacia PC184]
gi|124872120|gb|EAY63836.1| hypothetical protein BCPG_02137 [Burkholderia cenocepacia PC184]
Length = 154
Score = 36.8 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 9/95 (9%)
Query: 23 NNISKGKGKRVVDAQRIT-----CEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKI 77
+S G G+ A + + R T + V I + K
Sbjct: 53 TFVSGGVGQDESTAFQRSESQWPLALRFTGKGGEFLADVHVRI----VDGKGAEVLKTDA 108
Query: 78 IGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKE 112
G + + PG Y + AS+ + +TV +K
Sbjct: 109 RGPYMLVKVPPGRYTVHASYQGSDESRAVTVGAKG 143
>gi|163856909|ref|YP_001631207.1| hypothetical protein Bpet2597 [Bordetella petrii DSM 12804]
gi|163260637|emb|CAP42939.1| putative exported protein [Bordetella petrii]
Length = 145
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 210 KITFKLVSEMGGEAVADTAWSILTASGDTVGESA--NASPSMVLSEGDYTVIARNKERNY 267
+ S GG +AD +I A G+TV ++ + L G YTV AR
Sbjct: 66 PLALTFASTQGGAYLADVQVTITDAQGNTVLDATSDGPFLLVKLPAGRYTVSARFNGNEQ 125
Query: 268 SREFSVLT 275
+R +V
Sbjct: 126 TRHVAVPA 133
>gi|326388854|ref|ZP_08210436.1| membrane-bound proton-translocating pyrophosphatase
[Novosphingobium nitrogenifigens DSM 19370]
gi|326206454|gb|EGD57289.1| membrane-bound proton-translocating pyrophosphatase
[Novosphingobium nitrogenifigens DSM 19370]
Length = 699
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Query: 185 NAIVSTVVKVEP----GKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGD--T 238
N V V+ G +T+ RA IT LV+ + A+A W ++ +G +
Sbjct: 96 NVSVRANVRTAAAAQNGLQAGLTLAFRAGAITGMLVAGLALLAIAGFFWFLIGPAGHAPS 155
Query: 239 VGESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVE 282
A ++ L ++ AR +++ V VE
Sbjct: 156 DRTVVTALSTLALGASLVSIFARLGGGIFTKAADVGADLVGKVE 199
>gi|148643458|ref|YP_001273971.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
gi|148552475|gb|ABQ87603.1| adhesin-like protein [Methanobrevibacter smithii ATCC 35061]
Length = 767
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 45 LTENSTSIDSGVSWHIFDSISNKKNTLSTTKKIIGGKVS--FDLFPGDYLISASFGHVGV 102
L + G N T G V L P +Y+I+ +G + +
Sbjct: 622 LDGEGKPVGEGQ-----SVTFNINGVFYTKTTDENGMVKLGIKLLPDEYIITTIYGGIQI 676
Query: 103 VKKITVSSKEKNQKQVFILNAGGIRLYSIY-KPGSPIVDDELTFSI----YSNPNHKALL 157
K+TV S + + G + + + F+I Y+ ++A
Sbjct: 677 SNKVTVLSTLETSDLEMTYGQNKSFVAKTLDGQGKVLANQTVKFNINGVLYTKTTNEAG- 735
Query: 158 ITDKVRSGTLVRLGTNNYQITSHYGKY 184
+ +RL Y ITS Y Y
Sbjct: 736 -----EASLNIRLLPGQYIITSEYNGY 757
>gi|91201616|emb|CAJ74676.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 236
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 227 TAWSIL---TASGDTV---GESANASP-SMVLSEGDYTVIARNKERNYSREFSVLTGKST 279
T++S+ + SG TV + +P S L +G Y + + Y ++ + G++
Sbjct: 170 TSFSVTIDSSPSGATVFIDKKQVGITPYSTTLEKGSYGIRVEKEG--YENDYKITEGENR 227
Query: 280 IVEVLMRQK 288
++++
Sbjct: 228 EFNFKLKEE 236
>gi|167585592|ref|ZP_02377980.1| hypothetical protein BuboB_09666 [Burkholderia ubonensis Bu]
Length = 145
Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 64 ISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNA 123
I++ G + L PG Y + AS+ + +TV++K +Q F A
Sbjct: 86 IADANGAEVLKTDAHGPYMLVKLPPGRYTVQASYQGKDETRSVTVTAKGGA-RQAFTWPA 144
>gi|307327878|ref|ZP_07607060.1| major facilitator superfamily MFS_1 [Streptomyces violaceusniger Tu
4113]
gi|306886396|gb|EFN17400.1| major facilitator superfamily MFS_1 [Streptomyces violaceusniger Tu
4113]
Length = 807
Score = 36.4 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 170 LGTNNYQI-TSHYGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTA 228
L Y + + G + V G+ + V + A V + GG + DT
Sbjct: 682 LAPGTYTLTVAAAGHRPYATQVELTV--GEPVRVDAELAPAARVRGTVRDRGGRPLGDTR 739
Query: 229 WSILTASGDTVGESA----NASPSMVLSEGDYTVIA 260
S+L ASGD VG+ + L+ YTV+A
Sbjct: 740 VSLLDASGDVVGQVITGDDGSFGFEALTGDHYTVVA 775
>gi|329735168|gb|EGG71462.1| hypothetical protein SEVCU028_1004 [Staphylococcus epidermidis
VCU028]
Length = 398
Score = 36.0 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 172 TNNYQITSHYGKY-NAI---VSTVVKVEPGKIIDV-TIQNRAAKITFKLVSEMGGEAVAD 226
NY + + YG NA + + G + ++ +A I +L G A+ D
Sbjct: 207 PGNYHVVAGYGSSGNASTSNIKFDLSTYSGNLTLAGQLKQDSADIA-ELFESQNGLAI-D 264
Query: 227 TAWSILTASGDTVGESANASPSMVLSEGDYTVIAR-----NKERNYSREFSVLTGKSTIV 281
+I+T GD + ++ + + G ++A +K+R E+ V V
Sbjct: 265 LG-TIVTLDGDKIRKAQPNDTPIGVISGTAALVANEKTFHHKDRFLKNEYGVTITNRKQV 323
Query: 282 EVLMRQKRM 290
E + + +
Sbjct: 324 EFVDDEGNV 332
>gi|329737527|gb|EGG73777.1| hypothetical protein SEVCU028_1000 [Staphylococcus epidermidis
VCU028]
Length = 398
Score = 36.0 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 172 TNNYQITSHYGKY-NAI---VSTVVKVEPGKIIDV-TIQNRAAKITFKLVSEMGGEAVAD 226
NY + + YG NA + + G + ++ +A I +L G A+ D
Sbjct: 207 PGNYHVVAGYGSSGNASTSNIKFDLSTYSGNLTLAGQLKQDSADIA-ELFESQNGLAI-D 264
Query: 227 TAWSILTASGDTVGESANASPSMVLSEGDYTVIAR-----NKERNYSREFSVLTGKSTIV 281
+I+T GD + ++ + + G ++A +K+R E+ V V
Sbjct: 265 LG-TIVTLDGDKIRKAQPNDTPIGVISGTAALVANEKTFHHKDRFLKNEYGVTITNRKQV 323
Query: 282 EVLMRQKRM 290
E + + +
Sbjct: 324 EFVDDEGNV 332
>gi|171321220|ref|ZP_02910189.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
gi|171093504|gb|EDT38676.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
Length = 145
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 7 SYAKAENMHTTSTLLN-NNISKGKGKRVVDAQRITCEA-----RLTENSTSIDSGVSWHI 60
+YA+++ + S + + +S G GK A + A R T + V I
Sbjct: 27 AYAQSDGLPAASQQGDVSYVSGGIGKDQSTAFEQSEAAWPLALRFTGAGGEFLADVHVRI 86
Query: 61 FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKE 112
+ K T G + L PG Y + AS+ + +TV +K
Sbjct: 87 ----VDAKGTELLKTDARGPYMLVKLPPGRYTVHASYQGSDESRAVTVGAKG 134
>gi|73540865|ref|YP_295385.1| hypothetical protein Reut_A1166 [Ralstonia eutropha JMP134]
gi|72118278|gb|AAZ60541.1| hypothetical protein Reut_A1166 [Ralstonia eutropha JMP134]
Length = 192
Score = 36.0 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 210 KITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVL--SEGDYTVIARNKERNY 267
K+ + + G A++D + ++ A D V + + P + L G Y V+ R +
Sbjct: 80 KVRLRFLDSADGSALSDVSVTLFNAQRDIVLQVVSEGPYLYLNPPPGPYRVLVRYGKAIA 139
Query: 268 SREFSVLT-GKSTIVEVLMRQKRMDKNGQHNT 298
F V G +T + + + + + + Q T
Sbjct: 140 CHHFHVAAHGHATDLVLRLPARALAGDAQLAT 171
>gi|315224945|ref|ZP_07866764.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
gi|314945058|gb|EFS97088.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
Length = 537
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 197 GKIIDVTIQN--RAAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSMVLSEG 254
GK+ + T+ +A +++SE GE + + G + E A A ++G
Sbjct: 131 GKLQEATLTQMQQAGFNPLQVISERTGETMTSLQ-ERMDKGGISARELAEAFRWATDAQG 189
Query: 255 DYTVIARNKERNYSREFSV 273
D+ A N F+V
Sbjct: 190 DFYQGAENVNSTLQGRFTV 208
>gi|206561165|ref|YP_002231930.1| hypothetical protein BCAL2828 [Burkholderia cenocepacia J2315]
gi|198037207|emb|CAR53128.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 154
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 9/95 (9%)
Query: 23 NNISKGKGKRVVDA-----QRITCEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKI 77
+S G G+ A + R T + V I + K
Sbjct: 53 TFVSGGVGQDESTAFQRNESQWPLALRFTGKGGEFLADVHVRI----VDGKGAEVLKTDT 108
Query: 78 IGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKE 112
G + + PG Y + AS+ + +TV +K
Sbjct: 109 RGPYMLVKVPPGRYTVHASYQGSDESRAVTVGAKG 143
>gi|187921229|ref|YP_001890261.1| alpha-2-macroglobulin domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187719667|gb|ACD20890.1| alpha-2-macroglobulin domain protein [Burkholderia phytofirmans
PsJN]
Length = 1596
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 67/220 (30%), Gaps = 34/220 (15%)
Query: 82 VSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDD 141
L PG Y++ A G+ + VS K ++G + + G P+ +
Sbjct: 253 PVGKLPPGLYIVEAVIGNYRAHTLLFVSDTVAVVKAA---SSGMLVWTTRRDNGKPVANT 309
Query: 142 ELTFSIYSN------PNHKALLITDKVRSGTLVRLGT----------NNYQITSHYGKYN 185
E+ ++ L+ V LG N Y + Y
Sbjct: 310 EVNWTDGVGVLQSGTTGGDGALVLQHVSPERSYVLGADPQGGVFVSENFYYDSEIYNTKI 369
Query: 186 AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVGES--- 242
V+ PG + V R TF+ ++ A AD +L +G V S
Sbjct: 370 YAVTDRPMYRPGDPVHVKFIGR----TFQNATQSSAPAEADIKLDVLDPNGAPVATSKVH 425
Query: 243 ----ANASPSMVL----SEGDYTVIARNKERNYSREFSVL 274
A + L + G YT+ Y F V
Sbjct: 426 FASDTGADTAFTLPADATAGGYTLRFDYIGDVYGSAFRVA 465
>gi|187925237|ref|YP_001896879.1| hypothetical protein Bphyt_3264 [Burkholderia phytofirmans PsJN]
gi|187716431|gb|ACD17655.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 165
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 9/96 (9%)
Query: 23 NNISKGKGKRVVDAQRIT-----CEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKI 77
+ +S G G A + R T + + V + D+ + + +
Sbjct: 64 SFVSGGVGLDESKALQQAQSQWPLSLRFTGPGSDFLADVHVRVVDAHNGE----VLSTTS 119
Query: 78 IGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEK 113
G + L PG Y + A + K +TV +K
Sbjct: 120 RGPYMLVKLRPGRYTVHAQYKDRDQSKPVTVPAKGT 155
>gi|89054212|ref|YP_509663.1| von Willebrand factor, type A [Jannaschia sp. CCS1]
gi|88863761|gb|ABD54638.1| von Willebrand factor type A [Jannaschia sp. CCS1]
Length = 1356
Score = 36.0 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 227 TAWSILTASGDTVGESA-NASPSMVLSEGDYTVIAR----NKERNYSREFSVLTGKSTIV 281
W++L A GD V + L G Y A + + Y F+V+ G++ ++
Sbjct: 232 VTWTLLGADGDVVSTGTPGPAIDASLFPGTYIAQATRTEPDGPQTYQTSFTVIDGQTDLI 291
Query: 282 EVLM 285
V M
Sbjct: 292 VVAM 295
>gi|107023552|ref|YP_621879.1| hypothetical protein Bcen_2005 [Burkholderia cenocepacia AU 1054]
gi|116690635|ref|YP_836258.1| hypothetical protein Bcen2424_2615 [Burkholderia cenocepacia
HI2424]
gi|170733979|ref|YP_001765926.1| hypothetical protein Bcenmc03_2644 [Burkholderia cenocepacia MC0-3]
gi|105893741|gb|ABF76906.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
gi|116648724|gb|ABK09365.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
gi|169817221|gb|ACA91804.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
Length = 145
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 9/95 (9%)
Query: 23 NNISKGKGKRVVDAQRIT-----CEARLTENSTSIDSGVSWHIFDSISNKKNTLSTTKKI 77
+S G G+ A + + R T + V I + K
Sbjct: 44 TFVSGGVGQDESTAFQRSESQWPLALRFTGKGGEFLADVHVRI----VDGKGAEVLKTDA 99
Query: 78 IGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKE 112
G + + PG Y + AS+ + +TV +K
Sbjct: 100 RGPYMLVKVPPGRYTVHASYQGSDESRAVTVGAKG 134
>gi|323357783|ref|YP_004224179.1| phosphohydrolase [Microbacterium testaceum StLB037]
gi|323274154|dbj|BAJ74299.1| predicted phosphohydrolase [Microbacterium testaceum StLB037]
Length = 1111
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 9/153 (5%)
Query: 94 SASFGHVGVVKKITVS-SKEKNQKQVFILNAGG--IRLYSIYKPGSPIVDDELTFSIYSN 150
+G VG + + + + ++ Q ++AGG L + P +F
Sbjct: 652 HGWYGCVGETRVVDHALTTDQFLYQRQNIDAGGPQFALTTDVSAAQPADASLSSFDGTGL 711
Query: 151 PNHKALLITDKVRSGTLVRLGTNNYQI-----TSHYGKYNAIVSTVVKVEPGKIIDVTIQ 205
++ G + I + G + + GK I+ T+
Sbjct: 712 TGADVRVVEQGRTIGRTAVSSDGTWHIALDTPVTGAGAHPLSFVQSLGSRDGKAIEATVT 771
Query: 206 NRAAKITFKLVSEMGGEAVADTAWSILTASGDT 238
A+ T S+ A +S++ A G
Sbjct: 772 ISASLPTLTDPSDQRVLVGATATFSVI-AGGSP 803
>gi|326774564|ref|ZP_08233829.1| Subtilisin [Streptomyces cf. griseus XylebKG-1]
gi|326654897|gb|EGE39743.1| Subtilisin [Streptomyces cf. griseus XylebKG-1]
Length = 1114
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 20/146 (13%)
Query: 36 AQRITCEARLTENSTSIDSGV----SWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDY 91
++ A + +G + + T +GG V G Y
Sbjct: 543 TLDLSLSAPTGGDGQPAPAGFFTLGAQRVTVPAGGTAAVDLTADTRLGGTV-----DGSY 597
Query: 92 --LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS 149
+ AS G +GV TV + ++ + F + + G+P + YS
Sbjct: 598 SATVVASGGGLGVRTAATVEREAESYEVTF---------NATGRDGAPSTGWQADLKGYS 648
Query: 150 NPNHKALLITDKVRSGTLVRLGTNNY 175
D VRL Y
Sbjct: 649 GHASGQRFFPDLSSGSVTVRLPRGTY 674
>gi|182434037|ref|YP_001821756.1| putative secreted peptidase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178462553|dbj|BAG17073.1| putative secreted peptidase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 1114
Score = 36.0 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 20/146 (13%)
Query: 36 AQRITCEARLTENSTSIDSGV----SWHIFDSISNKKNTLSTTKKIIGGKVSFDLFPGDY 91
++ A + +G + + T +GG V G Y
Sbjct: 543 TLDLSLSAPTGGDGQPAPAGFFTLGAQRVTVPAGGTAAVDLTADTRLGGTV-----DGSY 597
Query: 92 --LISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSPIVDDELTFSIYS 149
+ AS G +GV TV + ++ + F + + G+P + YS
Sbjct: 598 SATVVASGGGLGVRTAATVEREAESYEVTF---------NATGRDGAPSTGWQADLKGYS 648
Query: 150 NPNHKALLITDKVRSGTLVRLGTNNY 175
D VRL Y
Sbjct: 649 GHASGQRFFPDLSSGSVTVRLPRGTY 674
>gi|261350633|ref|ZP_05976050.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
gi|288861416|gb|EFC93714.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
Length = 1011
Score = 36.0 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 13/113 (11%)
Query: 80 GKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAGGIRLYSIYKPGSP-- 137
++ +L PG Y ++ +G++ V K+ V + + + V + G +
Sbjct: 730 ASLAINLRPGVYDVTTMYGNMSVYSKVVVKTTIEGKDLVKMYQNGTQFFATFLGTDGKPL 789
Query: 138 IVDDELTFSI----YSNPNHKALLITDKVRSGTLVRLGTNNYQITSHYGKYNA 186
+ ++TF+I Y+ ++ + + L Y I + N+
Sbjct: 790 ANNTKVTFNINGVFYTRQTNENGVARLNIN------LRPGEY-ILTAINPVNS 835
>gi|221195611|ref|ZP_03568665.1| putative peptidoglycan bound protein [Atopobium rimae ATCC 49626]
gi|221184377|gb|EEE16770.1| putative peptidoglycan bound protein [Atopobium rimae ATCC 49626]
Length = 527
Score = 35.7 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 208 AAKITFKLVSEMGGEAVADTAWSILTASGDTVGESANASPSM---VLSEGDYTVIARNKE 264
A+KI V E G + D +++ G T + A ++ VL +G Y V +
Sbjct: 388 ASKIKLVKVDEDGTTPLKDAVFTVTKPDGSTFELTTGADGTVTSGVLVQGTYKVKEKTAP 447
Query: 265 RNYS 268
+ Y
Sbjct: 448 KGYE 451
>gi|167561733|ref|ZP_02354649.1| hypothetical protein BoklE_04153 [Burkholderia oklahomensis EO147]
gi|167568967|ref|ZP_02361841.1| hypothetical protein BoklC_03918 [Burkholderia oklahomensis C6786]
Length = 140
Score = 35.7 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 219 MGGEAVADTAWSILTA-SGDTVG-ESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
GGE +AD S+L A G+ + ++ + L G YTV A + +V
Sbjct: 69 AGGEYLADVHVSVLDAHGGEVLKTDARGPYMLVRLQPGRYTVQASYNGNEQTHAVTVPA 127
>gi|330470364|ref|YP_004408107.1| peptidase S8/S53 subtilisin kexin sedolisin [Verrucosispora maris
AB-18-032]
gi|328813335|gb|AEB47507.1| peptidase S8/S53 subtilisin kexin sedolisin [Verrucosispora maris
AB-18-032]
Length = 1445
Score = 35.7 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 18/150 (12%)
Query: 62 DSISNKKNTLSTTKKIIGGKVSFDL--FPGDYLISAS-FGHVGVVKKITVSSKEKNQKQV 118
D ++ T T G + L G+ ++ S +G+VG +TV+ +
Sbjct: 485 DPVNGATVTDGTRTTSTGPDGRYTLSVPAGESTVTVSAYGYVGQSATVTVAEGGAVTRD- 543
Query: 119 FILNAGGI-----RLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTN 173
F L A ++ G P+ + P + TD V
Sbjct: 544 FALTANPTVTVKGKVTDASGHGWPLYA---RIEVAGRPGG--PIFTDPVTGRYSFTAPGG 598
Query: 174 NYQ---ITSHYGKYNAIVSTVVKVEPGKII 200
+T+ Y Y A+ V V +
Sbjct: 599 TSYRLTVTARYPGYQAVTR-DVAVAARDVT 627
>gi|210632030|ref|ZP_03297170.1| hypothetical protein COLSTE_01063 [Collinsella stercoris DSM 13279]
gi|210159746|gb|EEA90717.1| hypothetical protein COLSTE_01063 [Collinsella stercoris DSM 13279]
Length = 1195
Score = 35.7 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 81 KVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILN-AGGIRLYSIYKPGSPIV 139
+V+F PGDY++ ++ G + I ++ F+L AGG +LY +
Sbjct: 507 EVTFPFKPGDYVVHSTHGVALFAE-IVRQEVGGKERDYFLLEYAGGDKLY--------VP 557
Query: 140 DDEL-TFSIYSNPNHK 154
+++ + Y P+
Sbjct: 558 LEQVDRITCYVGPDGD 573
>gi|83718734|ref|YP_441232.1| hypothetical protein BTH_I0676 [Burkholderia thailandensis E264]
gi|167618060|ref|ZP_02386691.1| hypothetical protein BthaB_17266 [Burkholderia thailandensis Bt4]
gi|257140102|ref|ZP_05588364.1| hypothetical protein BthaA_13000 [Burkholderia thailandensis E264]
gi|83652559|gb|ABC36622.1| conserved hypothetical protein [Burkholderia thailandensis E264]
Length = 140
Score = 35.7 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 219 MGGEAVADTAWSILTA-SGDTVG-ESANASPSMVLSEGDYTVIARNKERNYSREFSVLT 275
GGE ++D S+L A G+ + ++ + L G YTV A +R +V
Sbjct: 69 AGGEYLSDVHVSVLDAHGGEVLKTDARGPYMLVRLKPGRYTVHASYNGNEQTRAVTVPA 127
>gi|56965328|ref|YP_177060.1| collagen adhesion protein [Bacillus clausii KSM-K16]
gi|56911572|dbj|BAD66099.1| collagen adhesion protein [Bacillus clausii KSM-K16]
Length = 475
Score = 35.7 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 67/240 (27%), Gaps = 33/240 (13%)
Query: 72 STTKKIIGGKVSFDLFPGDY-LISAS----FGHVGVVKKITVSSKEK---NQKQVFILNA 123
G DL PG Y + + +TV + K+ L
Sbjct: 125 QLVTDENGLVAVSDLVPGTYYFVETKAPLHYERDAEPVAVTVEKGQTEAAVVKKSNTLIP 184
Query: 124 GGIRLYSI--YKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
G + L + + + E + L+TD+ + L NYQ
Sbjct: 185 GAVVLEKVDSSDHSTLLAGAEFRLEDEQGTVIQEKLVTDETGRIIVTDLKPGNYQFVETK 244
Query: 182 G----KYN------AIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSI 231
N I + E ++ + V G + +++
Sbjct: 245 APNGYDLNEEGLAFTIERSQ---EAAVVVKAENTLTPGSVEIVKVDSSDGARLEGAVFTV 301
Query: 232 LTASGDTVGESANASPSMV-----LSEGDYTVIARNKERNYSRE-----FSVLTGKSTIV 281
LT GD V E S L+ G Y ++ +Y F + G++ +
Sbjct: 302 LTEDGDMVAEGLTTDESGSVQLDGLAPGTYQLVETKAPAHYQLNETPIAFEISKGQTERL 361
>gi|222445459|ref|ZP_03607974.1| hypothetical protein METSMIALI_01098 [Methanobrevibacter smithii
DSM 2375]
gi|222435024|gb|EEE42189.1| hypothetical protein METSMIALI_01098 [Methanobrevibacter smithii
DSM 2375]
Length = 1056
Score = 35.7 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 83 SFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFILNAG-GIRLYSIYKPGSPIVDD 141
+ +L PG Y+I+A + V KI V + G + + G P+
Sbjct: 302 NINLNPGHYIITAMYNSCFVSNKILVKPTIQTNDLEMNFKDGSAFKTFVTTNEGKPVGAG 361
Query: 142 E-LTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSHY 181
E +TF+I N + + L Y IT++Y
Sbjct: 362 ENVTFNI--NGVFYTKTTNSNSIASLNINLNPGEYIITTYY 400
>gi|77461032|ref|YP_350539.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Pseudomonas
fluorescens Pf0-1]
gi|123603258|sp|Q3K6Q6|PANB_PSEPF RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase;
AltName: Full=Ketopantoate hydroxymethyltransferase;
Short=KPHMT
gi|77385035|gb|ABA76548.1| ketopantoate hydroxymethyltransferase [Pseudomonas fluorescens
Pf0-1]
Length = 266
Score = 35.7 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 175 YQITS-HYGKYNAIVSTVVKVEPGKIIDVTIQNRA--AKITFKLVSEMGGEAVADTAWSI 231
Y + S G +A++ + ++ T+ N A + +V G +AD + +
Sbjct: 67 YHVASVKRGNSDALILADLPFMANATLEQTMTNSALLMQAGAHMVKVEGALWLAD-SIRL 125
Query: 232 LTASGDTVGESANASPSMVLSEGDYTVIARNKERNYS 268
L G V +P V G Y V RN+ +
Sbjct: 126 LAERGVPVCAHMGLTPQAVNILGGYKVQGRNENQARQ 162
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.309 0.148 0.410
Lambda K H
0.267 0.0453 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,267,920,021
Number of Sequences: 13984884
Number of extensions: 221340449
Number of successful extensions: 493714
Number of sequences better than 10.0: 336
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 492486
Number of HSP's gapped (non-prelim): 920
length of query: 298
length of database: 4,792,584,752
effective HSP length: 138
effective length of query: 160
effective length of database: 2,862,670,760
effective search space: 458027321600
effective search space used: 458027321600
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.5 bits)
S2: 81 (35.7 bits)