HHsearch alignment of GI: 254780161 and MMDB domain: 2j1p_A_
>2j1p_A (A:) Geranylgeranyl pyrophosphate synthetase; transferase, isoprene biosynthesis, multifunctional enzyme, carotenoid biosynthesis; HET: GRG; 1.8A {Sinapis alba} PDB: 2j1o_A
Probab=91.14 E-value=0.43 Score=26.01 Aligned_cols=80 Identities=5% Similarity=0.157 Sum_probs=50.3
Q ss_pred HHHHHHHHCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHH---CCCCC---HHHHHHHHHHHHHHHHHHHHHHCCHH-
Q ss_conf 99999853058888----998999998644337999999984---03430---34557668899999989988722478-
Q gi|254780161|r 120 MIEAHFFDSYNDSI----FDCKQFEHYAFRISSRLIHLATMI---LDSER---YSASLRVIKYAGIAQFIGQLICQLPI- 188 (299)
Q Consensus 120 lid~~~~Dl~~~~~----~t~~~L~~Y~~~~ag~vg~l~~~i---~~~~~---~~~~~~~a~~lG~A~ql~niLRdi~~- 188 (299)
+.++...|+..... .|.+++..-++...|++..+.+.+ +++.. .+.......++|.|+|+.|=+.|+-.
T Consensus 162 ~~~gq~~d~~~~~~~~~~~t~~~y~~i~~~KT~~lf~~~~~lga~lag~~~~~~~~~~~~g~~lG~afQi~DD~ld~~~~ 241 (293)
T 2j1p_A 162 LVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKS 241 (293)
T ss_dssp HHHHHHHTTC---CCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEHHCCHHHHHHHCC
T ss_conf 99998653456640345578999999999878999997999746340031999999996760645001000875654168
Q ss_pred ---------HHHCCCCCCCH
Q ss_conf ---------76348873467
Q gi|254780161|r 189 ---------HYHRGQLYFPL 199 (299)
Q Consensus 189 ---------d~~~gr~yLP~ 199 (299)
|+..|++-+|.
T Consensus 242 ~~~~gk~~~Di~~gk~T~p~ 261 (293)
T 2j1p_A 242 SKLTYPKLXGLEKSREFAEK 261 (293)
T ss_dssp -CCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
T ss_conf 61368889538989999999