HHsearch alignment of GI: 254780161 and MMDB domain: 2qis_A_241-374
>2qis_A (A:241-374) Farnesyl pyrophosphate synthetase; trans-prenyltransferase, structural genomics, structural genomics consortium, SGC; HET: RIS; 1.80A {Homo sapiens} PDB: 1yv5_A* 1yq7_A* 2opm_A* 2opn_A* 3cp6_A* 2rah_A* 2vf6_A* 1zw5_A* 3b7l_A* 2f94_F* 2f89_F* 2f7m_F* 2f8z_F* 2f8c_F* 2f92_F* 2f9k_F*
Probab=90.08 E-value=1.2 Score=22.98 Aligned_cols=93 Identities=8% Similarity=-0.015 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCH----------HHHHCCCCCCCHHHHHHCCCCHHHHH----CCCCCHH----HHHH
Q ss_conf 3455766889999998998872247----------87634887346789996399977852----4689987----9999
Q gi|254780161|r 163 YSASLRVIKYAGIAQFIGQLICQLP----------IHYHRGQLYFPLDILGAVGLDRESFL----SGQNSDR----ISLA 224 (299)
Q Consensus 163 ~~~~~~~a~~lG~A~ql~niLRdi~----------~d~~~gr~yLP~~~l~~~gv~~e~l~----~~~~~~~----~~~~ 224 (299)
.........++|.|+|+.+=+.|+- .|+..|+.-+|.-..-.++-..+... .+..++. +.++
T Consensus 6 ~~~l~~~g~~lGiafQI~DD~lD~~~~~~~gK~~g~Dl~~gk~T~pii~al~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (134)
T 2qis_A 6 HANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKAL 85 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHCSCCCTTTTTCCCHHHHHHHHHCCHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99999899999999998643113004602220124647269007999999993999999999998679998999999999
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHH
Q ss_conf ------99999999999999996445289999-99999
Q gi|254780161|r 225 ------IKIFAELGLKYLFKAREEMRYILPDV-FPAFI 255 (299)
Q Consensus 225 ------~~~~~~~A~~~l~~a~~~~~~lp~~~-r~~~l 255 (299)
+......+..+..+|...+..+|... +.++.
T Consensus 86 i~~~g~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~L~ 123 (134)
T 2qis_A 86 YEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFL 123 (134)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99879899999999999999999998089936899999