HHsearch alignment of GI: 254780161 and MMDB domain: 3ipi_A_
>3ipi_A (A:) Geranyltranstransferase; isoprene biosynthesis, helical bundle, protein structure initiative II (PSI II), structural genomics, nysgxrc; 1.90A {Methanosarcina mazei}
Probab=96.37 E-value=0.075 Score=31.17 Aligned_cols=121 Identities=12% Similarity=-0.007 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHC---CC---CCHHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf 99999999998530588-889989999986443379999999840---34---303455766889999998998872---
Q gi|254780161|r 115 QYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIHLATMIL---DS---ERYSASLRVIKYAGIAQFIGQLIC--- 184 (299)
Q Consensus 115 ~~l~~lid~~~~Dl~~~-~~~t~~~L~~Y~~~~ag~vg~l~~~i~---~~---~~~~~~~~~a~~lG~A~ql~niLR--- 184 (299)
..+..++.|...|+... ...|++++..-++.-.|++..+++.+- ++ .........+.++|.++|+.+=+.
T Consensus 134 ~~~~~~~~GQ~~d~~~~~~~~s~~~y~~~~~~KT~~l~~~~~~~ga~~~g~~~~~~~~l~~~g~~lG~afQi~DD~~d~~ 213 (295)
T 3ipi_A 134 KAGXDXAEGEVLDLKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEFL 213 (295)
T ss_dssp HHHHHHHHHHHHHHC-------CHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99986224778876332011219999999987544167889988577873013678999999998999999877764014
Q ss_pred --CCHHHHHCCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf --24787634887346789996399977852468998799999999999999999999644528
Q gi|254780161|r 185 --QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246 (299)
Q Consensus 185 --di~~d~~~gr~yLP~~~l~~~gv~~e~l~~~~~~~~~~~~~~~~~~~A~~~l~~a~~~~~~l 246 (299)
+...|+..|+.-+|.-..-+. .++.....+............+..+.++..
T Consensus 214 g~~~~~Dl~~gk~Tlp~~~a~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 266 (295)
T 3ipi_A 214 EVVEGKESKFTSETLPHIYXKST-----------SKEEALKKSIDCVKLHVAAAKETLETFREC 266 (295)
T ss_dssp HHHHC-------CCHHHHHTTTS-----------CHHHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CCCCHHHHHCCCCCHHHHHHHHC-----------CCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 77300003237434899998861-----------879999999999999999999998637698