HHsearch results for GI: 254780161 and protein with PDBid: 1ps1_A
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=95.98 E-value=0.082 Score=29.88 Aligned_cols=174 Identities=11% Similarity=0.037 Sum_probs=109.3
Q ss_pred HHHHHHCCHHHHHH---HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC-
Q ss_conf 79988599888068---99999999999776036788258999999999999977401789868989999999998618-
Q gi|254780161|r 36 YLACLLSPPLYRIS---LSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD- 111 (299)
Q Consensus 36 y~a~~~lP~~~R~~---~~alyaf~re~d~i~d~~~~~~~~~~rL~~w~~~l~~~~~~~~~~~~~Pv~~aL~~~~~~~~- 111 (299)
.+++.+.|.-..+. +.-+.+|.-..||..|+.... ....++...+.+.....+....+.+|+..++.+...+..
T Consensus 52 ~~~a~~~P~a~~~~L~l~a~~~~w~f~~DD~~D~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~dl~~r~~~ 129 (337)
T 1ps1_A 52 DLASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRGE--NPEDTKQLTDQVAAALDGPLPDTAPPIAHGFADIWRRTCE 129 (337)
T ss_dssp HHHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGGG--CHHHHHHHHHHHHGGGTSCCCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC--CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999778999999999999999998842220465656--8999999999999743588876431899999999999997
Q ss_pred -CCHH-------HHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHH--CCCC------CHHHHHHHHH
Q ss_conf -9989-------99999999985305----8888998999998644337999999984--0343------0345576688
Q gi|254780161|r 112 -LPNQ-------YFLDMIEAHFFDSY----NDSIFDCKQFEHYAFRISSRLIHLATMI--LDSE------RYSASLRVIK 171 (299)
Q Consensus 112 -l~~~-------~l~~lid~~~~Dl~----~~~~~t~~~L~~Y~~~~ag~vg~l~~~i--~~~~------~~~~~~~~a~ 171 (299)
.+.. .+..++++..+... ...++|+++...+-..+.|....+.+-- .|.. ..+......+
T Consensus 130 ~~~~~~~~r~~~~~~~~~~~~~~e~~~~~~~~~~psl~eYl~~R~~~~g~~~~~~l~~~~~g~~lp~~~~~~~~~~~l~~ 209 (337)
T 1ps1_A 130 GMTPAWCARSARHWRNYFDGYVDEAESRFWNAPCDSAAQYLAMRRHTIGVQPTVDLAERAGRFEVPHRVFDSAVMSAMLQ 209 (337)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHTCHHHHHHHHHHHHTCCCCHHHHTSHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHH
T ss_conf 63999999999999999999999999750488899999999999971236899999999869988999984812599999
Q ss_pred HHHHHHHHHHHHHCCHHHHHCCCC-CCCHHHHHHCCCCHHH
Q ss_conf 999999899887224787634887-3467899963999778
Q gi|254780161|r 172 YAGIAQFIGQLICQLPIHYHRGQL-YFPLDILGAVGLDRES 211 (299)
Q Consensus 172 ~lG~A~ql~niLRdi~~d~~~gr~-yLP~~~l~~~gv~~e~ 211 (299)
..+....++|=+-..+.+.+.|.. -+-.-++..+|++.++
T Consensus 210 ~~~~~~~l~NDl~S~~KE~~~g~~~N~V~vl~~~~g~s~ee 250 (337)
T 1ps1_A 210 IAVDVNLLLNDIASLEKEEARGEQNNMVMILRREHGWSKSR 250 (337)
T ss_dssp HHHHHHHHHHHHHTHHHHHHTTCCCSHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
T ss_conf 99999989888888888876434641999998637989999