HHsearch results for GI: 254780161 and protein with PDBid: 1uby_A
>1uby_A FPS, farnesyl diphosphate synthase; transferase, isoprene biosynthesis, cholesterol biosynthesis; HET: DMA; 2.40A {Gallus gallus} SCOP: a.128.1.1 PDB: 1ubw_A* 1ubv_A* 1ubx_A* 1fps_A
Probab=90.20 E-value=0.83 Score=23.05 Aligned_cols=91 Identities=5% Similarity=-0.076 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHCCCCC-------CCCHHHHHHHHHHHHHHH--H---HHHHHHCCCCC---HHHHHHHHHHHHHHHHHH
Q ss_conf 99999999985305888-------899899999864433799--9---99998403430---345576688999999899
Q gi|254780161|r 116 YFLDMIEAHFFDSYNDS-------IFDCKQFEHYAFRISSRL--I---HLATMILDSER---YSASLRVIKYAGIAQFIG 180 (299)
Q Consensus 116 ~l~~lid~~~~Dl~~~~-------~~t~~~L~~Y~~~~ag~v--g---~l~~~i~~~~~---~~~~~~~a~~lG~A~ql~ 180 (299)
....+..|...|+...+ ..+++++..-+..-.+.. . .+.+.+.+..+ .........++|.|+|+.
T Consensus 177 ~~~~~~~GQ~lDl~~~~~~~~~~~~~t~~~y~~ii~~KTa~ls~~~~~~~~~~~~g~~~~~~~~~l~~~g~~lG~aFQI~ 256 (367)
T 1uby_A 177 TAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQ 256 (367)
T ss_dssp HHHHHHHHHHHHHHHSCTTSCCCTTCCHHHHHHHHHHHTHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88888999999997312444454327899999999998888888999998733222220377877765530005767731
Q ss_pred HHHHCC----------HHHHHCCCCCCCHHHHHHCC
Q ss_conf 887224----------78763488734678999639
Q gi|254780161|r 181 QLICQL----------PIHYHRGQLYFPLDILGAVG 206 (299)
Q Consensus 181 niLRdi----------~~d~~~gr~yLP~~~l~~~g 206 (299)
+=+-|+ +.|+..|++-+|.-..-+.+
T Consensus 257 DD~lD~~gd~~~~gk~g~Di~egK~Tlpvi~al~~~ 292 (367)
T 1uby_A 257 DDYLDCFGDPALTGAVGTDIQDNKCSWLVVQCLQRV 292 (367)
T ss_dssp HHHHHHHCCTTCSSCCCCCSSSCCCCHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHCCCCCHHHCCCHHHHHHHHHHHC
T ss_conf 467660289666198553765795259999999849