BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780161|ref|YP_003064574.1| phytoene synthase protein
[Candidatus Liberibacter asiaticus str. psy62]
         (299 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done



>gi|257094812|ref|YP_003168453.1| squalene synthase HpnD [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047336|gb|ACV36524.1| squalene synthase HpnD [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 277

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 104/277 (37%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  P   R +++ LY F  E+  V D  ++P     +L WW+
Sbjct: 5   EYCQEKTARSGSSFYYSFLFLPQNQRRAITALYAFCREVDDVVDECQDPQIAATKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                       +   P +  L +   ++ LP +   ++I+    D       D K    
Sbjct: 65  QELSGLYA---GKPQHPVTQALQAASGEFHLPEEQLQEIIDGMAMDLQQTRYLDFKALSL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++S +  LA  I   +            G+A  +  +I  +      G++Y P+D 
Sbjct: 122 YCYRVASVVGLLAAEIFGYQDRKTQKYAHD-LGLAFQLTNIIRDVGEDARMGRIYLPIDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+     L+ ++SD     ++   E    Y  +A +E+  I      P  +  +I 
Sbjct: 181 LQRFGVPAADILNARHSDNFRRLMEFQIERAEGYYAQAIDELPAIDRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G ++++   +   + + W    + +  
Sbjct: 241 RTLLDEIRRDGCQVLTQRTSLTPIRKLWIAWRTWVSG 277


>gi|187478908|ref|YP_786932.1| phytoene synthase [Bordetella avium 197N]
 gi|115423494|emb|CAJ50028.1| phytoene synthase [Bordetella avium 197N]
          Length = 287

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 101/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y A L  PP  R +++ LY F  E+  V D + +P    ++L WW+
Sbjct: 5   EYCQDKAAKSGSSFYYAFLFLPPERRRAITALYAFCREVDDVVDESSDPQLARVKLGWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              ++           P +  L   ++ Y +     L +I+    D       D      
Sbjct: 65  TQIDAMFA---GNPEHPVTRALQPHLQAYGISRARLLAVIDGMEMDLDQTRYLDWPGLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + +++ +  ++  I       A+L      G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCWHVAAVVGEMSAGIFGYTD-EATLDYAAKLGLAFQLTNIIRDVGDDARRGRIYLPIND 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+G  S+  S  +   A    +   +A + +         P  +  SI 
Sbjct: 181 LQKFEVKASDILNGTYSEGFSALMSFQAARARELYREAMQALPNADVRAQRPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   L + W    + +  
Sbjct: 241 YALLDEIERDNWQVLHQRISLTPLRKLWLAWKTWVGG 277


>gi|311107367|ref|YP_003980220.1| squalene synthase HpnD [Achromobacter xylosoxidans A8]
 gi|310762056|gb|ADP17505.1| squalene synthase HpnD [Achromobacter xylosoxidans A8]
          Length = 287

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 100/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R +++ LY F  E+  V D   +P    ++L WW+
Sbjct: 5   EYCQEKAAKSGSSFYYSFLFLPPERRRAITALYAFCREVDDVVDECTDPSLARVKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +            P +  L   ++   +  +  L +++    D       D      
Sbjct: 65  TQVDQMYN---GNPDHPVTRALQPHLQSCSITRERLLAVVDGMEMDLDQTRYLDWPGLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +  +  +  L+  +         L   +  G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCWHAAGVVGELSAGVFGYSDPKT-LVYAEKLGLAFQMTNIIRDVGDDARRGRIYLPVND 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           +    +     L+G+ S+R S  +K  A+   +   +A   +  +      P  +  +I 
Sbjct: 181 MQQFEVKASDILNGEYSERFSALMKFQADRARELYREAMSNLPEVDRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   L + W    + +  
Sbjct: 241 HALLDEIERDNWQVLHQRISLTPLRKLWLAWKTWVSG 277


>gi|71908319|ref|YP_285906.1| squalene/phytoene synthase [Dechloromonas aromatica RCB]
 gi|71847940|gb|AAZ47436.1| Squalene/phytoene synthase [Dechloromonas aromatica RCB]
          Length = 277

 Score =  235 bits (599), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 103/277 (37%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  P   R ++  LY F  E+  V D   +      +L WW+
Sbjct: 5   QYCQEKCAKSGSSFYYSFLFLPLQRRRAIMALYAFCREVDDVVDECNDVSIASTKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              E   +    +   P  + L  + +  +LP +  L++I+    D       D K    
Sbjct: 65  QEIERVAE---GKPQHPVGLALAGLDKSINLPKEQLLEIIDGMEMDLTQSRYLDFKGLSL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++S +  LA  I                G+A  +  +I  +     RG++Y P+D 
Sbjct: 122 YCYRVASVVGLLAAEIFGYTDRQTQKYAHD-LGMAFQLTNIIRDIGEDARRGRIYIPMDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L    +     L+G+ SD  +  ++   E   KY  +A  ++  +      P  I  +I 
Sbjct: 181 LKQFNVPAADILNGKYSDNFTALMQFQYERAEKYYEQAFAQLPAVDRKNQRPGLIMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +   F+++    +     + W    + IK 
Sbjct: 241 RTVLDEIKRENFQVLHQRISLPPTRKLWLAAKTWIKG 277


>gi|300510854|gb|ADK25054.1| phytoene synthase [Nicotiana tabacum]
          Length = 441

 Score =  233 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 92/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL   L  P  R ++  +Y +      + D          
Sbjct: 143 LLSEAYDRCGEVCAEYAKTFYLGTKLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPQ 202

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DMIE    D +      
Sbjct: 203 ALDRWETRLEDIF---SGRPFDMLDAALSDTVSRFPVDIQPFRDMIEGMRMDLWKSRYKT 259

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        G+A  +  ++  +    
Sbjct: 260 FDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALALGLANQLTNILRDVGEDA 319

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+    +K   +   K+  ++ + +  +    
Sbjct: 320 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKKQIQRARKFFDESEKGVTELDSAS 379

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 380 RWPVLTALLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIAYAK 426


>gi|262292933|gb|ACY42669.1| phytoene synthase 2 [Manihot esculenta]
          Length = 429

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 130 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRTTDELVDGPNASHITP 189

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 190 TALDRWEARLEDMFR---GRPFDMLDAALSDTVTKFPVDIQPFKDMIEGMRMDLKKSRYK 246

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 247 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNILRDVGED 306

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 307 ARRGRIYLPQDELAQAGLSDDDIFAGKVTDKWRNFMKNQIKRARMFFNEAEKGVTELSAA 366

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 367 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVSKTKKIASLPIAYAR 414


>gi|262292925|gb|ACY42665.1| phytoene synthase 2 [Manihot esculenta]
 gi|262292929|gb|ACY42667.1| phytoene synthase 2 [Manihot esculenta]
 gi|262292931|gb|ACY42668.1| phytoene synthase 2 [Manihot esculenta]
          Length = 429

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 130 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 189

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 190 TALDRWEARLEDMFR---GRPFDMLDAALSDTVTKFPVDIQPFKDMIEGMRMDLKKSRYK 246

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 247 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNILRDVGED 306

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 307 ARRGRIYLPQDELAQAGLSDDDIFAGKVTDKWRNFMKNQIKRARMFFNEAEKGVTELSAA 366

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 367 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVSKTKKIASLPIAYAR 414


>gi|293606272|ref|ZP_06688634.1| phytoene/squalene synthetase [Achromobacter piechaudii ATCC 43553]
 gi|292815337|gb|EFF74456.1| phytoene/squalene synthetase [Achromobacter piechaudii ATCC 43553]
          Length = 287

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 101/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R +++ LY +  E+  V D   +P    ++L WW+
Sbjct: 5   EYCQEKAAKSGSSFYYSFLFLPPERRRAITALYAYCREVDDVVDECTDPSLARIKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +        +   P +  L   ++   +  +  L +++    D       D      
Sbjct: 65  TQVDQMFD---GKPDHPVTRALQPHLQTCSITRERLLAVVDGMEMDLDQTRYLDWPGLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +  +  +  L+  +         L   +  G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCWHAAGVVGELSAGVFGYSDPKT-LVYAEKLGLAFQMTNIIRDVGDDARRGRIYIPVND 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           +    +     L+G+ S+R S  +K  A+   +   +A   +  +      P  +  +I 
Sbjct: 181 MQQFEVKASDILNGEYSERFSALMKFQADRARELYREAMSNLPEVDRRSQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   L + W    + +  
Sbjct: 241 HALLDEIERDNWQVLHQRISLTPLRKLWLAWKTWVGG 277


>gi|155965503|gb|ABU40771.1| phytoene synthase 2 [Solanum lycopersicum]
 gi|157703485|gb|ABV68559.1| phytoene synthase 2 [Solanum lycopersicum]
          Length = 438

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 95/287 (33%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL  +L  P  R ++  +Y +      + D          
Sbjct: 140 LLSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIYVWCRRTDELVDGPNASHITPQ 199

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DM+E    D +     +
Sbjct: 200 ALDRWEARLEDIFN---GRPFDMLDAALSDTVSRFPVDIQPFRDMVEGMRMDLWKSRYNN 256

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 257 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 316

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+  +A + +  +    
Sbjct: 317 RRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIQRARKFFDEAEKGVTELSSAS 376

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 377 RWPVLASLLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIAYAR 423


>gi|262292935|gb|ACY42670.1| phytoene synthase 2 [Manihot esculenta]
          Length = 429

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 130 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 189

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 190 TDLDRWEARLEDMFR---GRPFDMLDAALSDTVTKFPVDIQPFKDMIEGMRMDLKKSRYK 246

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 247 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNILRDVGED 306

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 307 ARRGRIYLPQDELAQAGLSDDDIFAGKVTDKWRNFMKNQIKRARMFFNEAEKGVTELSAA 366

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 367 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVSKTKKIASLPIAYAR 414


>gi|78191065|gb|ABB29857.1| phytoene synthase [Nicotiana langsdorffii x Nicotiana sanderae]
          Length = 440

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 94/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL   L  P  R ++  +Y +      + D          
Sbjct: 142 LLSEAYDRCGEVCAEYAKTFYLGTKLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPQ 201

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E        +        L   V ++ +  Q F DMIE    D +     +
Sbjct: 202 ALDRWEARLEDIF---SGQPFDMLDAALSDTVSRFPVDIQPFRDMIEGMRMDLWKSRYNN 258

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        G+A  +  ++  +    
Sbjct: 259 FDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALALGLANQLTNILRDVGEDA 318

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+    +K   +   K+  ++ + +  +    
Sbjct: 319 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKKQIQRARKFFDESEKGVTELDSAS 378

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 379 RWPVLAALLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIAYAK 425


>gi|300311904|ref|YP_003775996.1| phytoene synthase [Herbaspirillum seropedicae SmR1]
 gi|300074689|gb|ADJ64088.1| phytoene synthase protein [Herbaspirillum seropedicae SmR1]
          Length = 277

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 100/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y + L  PP  R++++ LY F  E+    D   + +    +L WW+
Sbjct: 5   EYCQQKAAASGSSFYYSFLFLPPQRRLAITALYAFCREVDDTVDEIEDTMVARTKLMWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +  +    +   P +  L   V  Y L  ++   +I+    D       D    + 
Sbjct: 65  KEIAAMLE---GQPTHPVTKALHPHVATYGLKGEHLQAIIDGMEMDLDQSRYLDYPGLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++  +  L+  I        +L   +  G+A  +  +I  +     +G++Y P++ 
Sbjct: 122 YCWHVAGVVGVLSASI-FGHTQPGTLLFAEKLGLAFQLTNIIRDVGEDGRKGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ ++S+R    +K   E       +A   +         P  +  +I 
Sbjct: 181 LQQFNVTAADILNARHSERFEALMKFQVERAQAVYDEAFALLPREDRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L      G+ ++    +   + + W    + +  
Sbjct: 241 RTLLDEIARDGYHVLHQRISLTPIRKLWLAWKTYVFG 277


>gi|82703460|ref|YP_413026.1| squalene/phytoene synthase [Nitrosospira multiformis ATCC 25196]
 gi|82411525|gb|ABB75634.1| Squalene/phytoene synthase [Nitrosospira multiformis ATCC 25196]
          Length = 280

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 96/277 (34%), Gaps = 2/277 (0%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R +++ LY F  E+  V D         ++L WW+
Sbjct: 5   QYCQEKAVQSGSSFYYSFLYLPPERRRAITALYAFCREVDDVVDECTEASVARVKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L  +   ++L      ++I+    D   +   D     H
Sbjct: 65  QEVAAIFDAGGNKPSHPVAQALAGVASTFNLTADRLNEIIDGMEMDLDYNRYADFDTLRH 124

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++S +   +  I         L   +  G+A  +  +I  +     R ++Y P D 
Sbjct: 125 YCYHVASVVGLCSAEIFGYRNPKT-LEYAQDLGLAFQLTNIIRDVGEDARRDRIYLPQDE 183

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+  E  L  + +D     I+   +    Y   A   +            I  +I 
Sbjct: 184 LARFGVSNEDILQSRETDNFRRLIEFQIDRAESYYANAFAALPEEDRKSQRSGIIMAAIY 243

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +++LK  +  G  ++    +   L + W    + +K 
Sbjct: 244 QALLKEIKADGCHVMRQRISLTPLRKLWIAWKTWMKG 280


>gi|262292923|gb|ACY42664.1| phytoene synthase 1 [Manihot esculenta]
 gi|262292927|gb|ACY42666.1| phytoene synthase 1 [Manihot esculenta]
          Length = 431

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 96/290 (33%), Gaps = 9/290 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
              + S           +     YL  LL  P  R ++  +Y +      + D       
Sbjct: 130 TSSLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHI 189

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L  W+   +   +             L   V ++ +  Q F DMIE    D     
Sbjct: 190 TPTALDRWEARLDDVFQ---GRPFDMLDAALSDTVTKFPVDIQPFKDMIEGMRMDLKKSR 246

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLP 187
             +  +   Y + ++  +  ++  ++           +        GIA  +  ++  + 
Sbjct: 247 YNNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNILRDVG 306

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               RG++Y P D L   GL  E   +G+ +++    +K   +    +  +A + +  + 
Sbjct: 307 EDARRGRIYLPQDELAQAGLSDEDIFAGEVTNKWRNFMKNQIKRARMFFNEAEKGVTELS 366

Query: 248 PDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                P +  + + + +L   + + +   +     N+  +  ++  +  +
Sbjct: 367 AASRWPVWASLLLYKQILDEIEANDYNNFTERAYVNKAKKLAFLPIAYAR 416


>gi|226424078|gb|ACO53104.1| phytoene synthase [Actinidia deliciosa]
          Length = 437

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  +L  P  R ++  +Y +      + D         
Sbjct: 137 SLLGEAYDRCGEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 196

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E      +          L   V ++ +  Q F DMIE    D       
Sbjct: 197 TALDRWESRLEDIF---LGRPFDMLDAALSDTVTKFPVDIQPFKDMIEGMRMDLRKSRYK 253

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  I+           +        GIA  +  ++  +   
Sbjct: 254 NFDELYLYCYYVAGTVGLMSVPIMGIAPDSLATTESVYNAALALGIANQLTNILRDVGED 313

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+  + +K   +    +  +A + +  +   
Sbjct: 314 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKHQIKRARMFFDEAEKGVTELSSA 373

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 374 SRWPVWASLLLYRQILDEIEANDYNNFTRRAYVSKPKKVLALPIAYAK 421


>gi|67925455|ref|ZP_00518797.1| Squalene/phytoene synthase [Crocosphaera watsonii WH 8501]
 gi|67852698|gb|EAM48115.1| Squalene/phytoene synthase [Crocosphaera watsonii WH 8501]
          Length = 310

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 107/303 (35%), Gaps = 16/303 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
                +             +  +      YL  LL PP  R ++  +Y +      + D 
Sbjct: 7   PTQPPQILASVEESYERCRQITQKYSKTFYLGTLLMPPEKRRAIWAIYVWCRRTDELVDG 66

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
            +   T    LQ W +  E   KG   +      V L+  ++++ +  + F DMI     
Sbjct: 67  PQAKYTTPETLQKWHEHLEHLFKGHPVDDED---VALVDTLQRFPVEIEPFEDMIAGQHM 123

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAG 174
           D Y +     +  + Y +R++  +  ++  +L  E   ++    K              G
Sbjct: 124 DLYRNRYETFEDLKLYCYRVAGTVGLMSNAVLGIEENPSAGPWDKENEPYIPKEEAIALG 183

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           IA  +  ++  +     RG++Y PL+ L          L G   DR    ++   +   +
Sbjct: 184 IANQLTNILRDVGEDAQRGRIYLPLEDLDRFNYTETDLLKGVIDDRWRELMRFEIQRARQ 243

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           Y   A   +R +  D   P +  + + + +L   + + + + S         +  Y+  +
Sbjct: 244 YYKDAERGIRLLSKDSRWPVWAALMLYQGILNVIEANDYDVFSQRAFVRTPKKMLYIPLA 303

Query: 294 SIK 296
            ++
Sbjct: 304 WLR 306


>gi|152979842|ref|YP_001353218.1| phytoene synthase [Janthinobacterium sp. Marseille]
 gi|151279919|gb|ABR88329.1| phytoene synthase [Janthinobacterium sp. Marseille]
          Length = 277

 Score =  228 bits (582), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 104/277 (37%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y + L   P  R +++ LY F  E+    D   + +    +L WW+
Sbjct: 5   EYCQQKAAQSGSSFYYSFLFLTPDRRRAITALYAFCREVDDTVDECTDVMIARTKLVWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                    +  E   P +  L   +  Y L +++ L +I+    D   +   D    + 
Sbjct: 65  KEV---GAMMAGEPTHPVTKALQPHMAVYALDSEHLLAIIDGMEMDLDQNRYLDFIGLQK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++S +  L+  I  +      L   +  G+A  +  +I  +     +G++Y P++ 
Sbjct: 122 YCWHVASVVGILSAKIFGATSPKT-LEYAEKLGLAFQLTNIIRDVGEDARKGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ ++S+     ++  A    K   +A   +         P  I  +I 
Sbjct: 181 LQQFNVTAAEILNARHSENFEKLMQFQAARAQKLYDEAFALLPKEDRRAQRPGLIMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +  GF +++   +   + + W    + I+ 
Sbjct: 241 RAVLNEVERDGFHVLNQRISLTPIRKLWLAWITYIRG 277


>gi|148906249|gb|ABR16280.1| unknown [Picea sitchensis]
          Length = 435

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
           ++             +     YL  LL  P  R ++  +Y +     ++ D         
Sbjct: 133 QLLEDAYERCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDKLVDGPNASHITP 192

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           M L  W+   E                 L   V ++ +  Q F DMIE    D       
Sbjct: 193 MALDRWEQRLEDLFN---GRPYDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSHYK 249

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  I+                    GIA  +  ++  +   
Sbjct: 250 NFDELYLYCYYVAGTVGLMSVPIMGISQDSHATTEDVYSAALALGIANQLTNILRDVGED 309

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   SG+ +D+    +K       K+  +A + +  +   
Sbjct: 310 SRRGRIYLPQDELARSGLSDEDIFSGKVTDKWRSFMKGQIRRARKFFDEAEKGVTELDKA 369

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      ++ +   +  +  +
Sbjct: 370 SRWPVWASLILYRQILDAIEANDYDNFTKRAYVGKVKKLLTLPVAYTR 417


>gi|317407373|gb|EFV87338.1| phytoene synthase [Achromobacter xylosoxidans C54]
          Length = 287

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 102/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R +++ LY +  E+  V D   +P    ++L WW+
Sbjct: 5   EYCQEKAAKSGSSFYYSFLFLPPERRRAITALYAYCREVDDVVDECTDPSLARIKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +        +   P +  L   ++   +  +  L +++    D       D      
Sbjct: 65  TQVDQMFD---GKPDHPVTRALQPHLQSCSITRERLLAVVDGMEMDLDQTRYLDWPGLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +  +  +  L+  +       A+L   +  G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCWHAAGVVGELSAGVFGYTD-PATLVYAEKLGLAFQMTNIIRDVGDDARRGRIYIPVND 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           +    +     L+G+ S+R S  +K  AE   +   +A   +         P  +  +I 
Sbjct: 181 MQQFEVKASDILNGEYSERFSALMKFQAERARELYREAMRSLPEADRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   L + W    + +  
Sbjct: 241 HALLDEIERDNWQVLHQRISLTPLRKLWLAWKTWVGG 277


>gi|17229325|ref|NP_485873.1| phytoene synthase [Nostoc sp. PCC 7120]
 gi|17130923|dbj|BAB73532.1| phytoene synthase [Nostoc sp. PCC 7120]
          Length = 310

 Score =  228 bits (581), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 109/293 (37%), Gaps = 16/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YL  LL  P  R ++  +Y +      + D   + IT    
Sbjct: 17  VDESYKLCRHLTAKYAKTFYLGTLLMSPAKRQAIWAIYAWCRRTDELVDGPASAITTPET 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E+   G   E+     V L+  +++++L  Q F DMI     D +       
Sbjct: 77  LDLWEQHLEAMFAGHPKENYD---VALVDTIQRFNLDIQPFRDMIAGQRMDLHRSRYETF 133

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLIC 184
           ++   Y +R++  +  ++T +++ +  + +    +              GIA  +  ++ 
Sbjct: 134 EELYLYCYRVAGTVGLMSTAVMEVDNTTNTAPWHQSKPLYIPTQEAIALGIANQLTNILR 193

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL+ L       + F +G   +R    ++   E   ++  +A + + 
Sbjct: 194 DVGEDARRGRIYIPLEDLARFNYTEQDFCNGVVDERWRSLMRFQIERARQFYAEAEKGIT 253

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           ++ PD   P +    +   +L   + + + + S      Q  +   +  + ++
Sbjct: 254 HLAPDARWPVWAASMLYGQILDVIERNDYDVFSQRAYVPQWKKLRTLPIAWMR 306


>gi|33592348|ref|NP_879992.1| putative phytoene synthase [Bordetella pertussis Tohama I]
 gi|33571993|emb|CAE41515.1| putative phytoene synthase [Bordetella pertussis Tohama I]
          Length = 287

 Score =  228 bits (581), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 104/277 (37%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R +++ LY F  E+  V D   +P    ++L WW+
Sbjct: 5   EYCQEKAAKSGSSFYYSFLFLPPARRRAITALYAFCREVDDVVDECSDPSLARVKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +     +  +   P +  L   +   ++  +  L +I+    D       D      
Sbjct: 65  TQVDQ---MVDGKPDHPVTRALQPHLADCNITRERLLAVIDGMEMDLDQTRYLDWPGLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++  +  L+  +   +  + +L      G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCWHVAGVVGELSAGVFGYQD-ARTLDYAGKLGLAFQLTNIIRDVGDDARRGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+G +S+R S  ++  AE       +A + +         P  +  +I 
Sbjct: 181 LQQFEVKAADILNGVHSERFSALMRFQAERTRGLYREAMQALPETDRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   + + W    + +  
Sbjct: 241 HALLDEIERDDWQVLHQRISLTPVRKLWLAWKTWVSG 277


>gi|325514254|gb|ADZ24219.1| phytoene synthase 1 [Nicotiana tabacum]
          Length = 440

 Score =  228 bits (581), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 93/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL   L  P  R ++  +Y +      + D          
Sbjct: 142 LLSEAYDRCGEVCAEYAKTFYLGTKLMTPERRRAIWSIYVWCRRTDELVDGPNASHITPQ 201

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DMIE    D +     +
Sbjct: 202 ALDRWEARLEDIF---SGRPFDMLDAALSDTVSRFPVDIQPFRDMIEGMRMDLWKSRYNN 258

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        G+A  +  ++  +    
Sbjct: 259 FDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALALGLANQLTNILRDVGEDA 318

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+    +K   +   K+  ++ + +  +    
Sbjct: 319 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKKQIQRARKFFDESEKGVTELDSAS 378

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 379 RWPVSTALLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIAYAK 425


>gi|302878945|ref|YP_003847509.1| squalene synthase HpnD [Gallionella capsiferriformans ES-2]
 gi|302581734|gb|ADL55745.1| squalene synthase HpnD [Gallionella capsiferriformans ES-2]
          Length = 277

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 101/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  P   R +++ LY F  E+  V D   +       LQWW+
Sbjct: 5   QYCQDKAAASGSSFYYSFLFLPKEKRRAITALYAFCREVDDVVDECSDEQVARTTLQWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P +  L+ +V Q+++  ++ L++I+    D       D K  + 
Sbjct: 65  TQVAEIY---SGRPQHPVAQALVPVVAQFNMAQEHLLEIIDGMEMDLDQPRYADFKSLQL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++S +  L+  I   +     L+     GIA  +  +I  +     R ++Y P+D 
Sbjct: 122 YCYRVASVVGLLSVEIFGYKDRQT-LKYAHDLGIAFQLTNIIRDVGEDARRNRIYLPMDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           +    +     L+   ++     +    E   ++  +A  ++            I  +I 
Sbjct: 181 MQQFNVTAADILNANETENFQKLMAFQIERAQRFYDQALAQLPATDRKNQRTGLIMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            + L    + G  ++    +   L + W   ++ IK 
Sbjct: 241 RATLDEVIHSGCHVLKERVSLTPLRKLWLAWTTWIKN 277


>gi|76560792|gb|ABA43898.1| phytoene synthase [Coffea canephora]
          Length = 439

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            I S           +     YL  +L  P  R ++  +Y +      + D         
Sbjct: 139 NILSEAYDRCGEVCAEYAQTFYLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 198

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 199 TALDRWEARLEDVFR---GHPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLKKSRYK 255

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 256 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKATVESVYNAALALGIANQLTNILRDVGED 315

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K   +   K+  +A + +  +   
Sbjct: 316 ATRGRIYLPQDELAQAGLSDEDIFAGKVTDQWRNFMKQQMKRARKFFDEAEKGVTELNSA 375

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +         ++  +   +  +  K
Sbjct: 376 SRWPVWASLLLYRQILDEIEANDYNNFDRRAYVSKPKKLLALPMAYAK 423


>gi|133251410|dbj|BAF49052.1| phytoene synthase [Prunus mume]
          Length = 434

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 93/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 125 SLMSDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 184

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 185 TALDRWESRLEDLFQ---GRPFDMLDAALSDTVNKFPVDIQPFKDMIEGMRMDLRKSIYQ 241

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 242 NFDELYLYCYYVAGTVGLMSVPVMGISPESQATTESVYNAALALGIANQLTNILRDVGED 301

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL      +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 302 ARRGRIYLPQDELAQAGLSDSDIYAGKVTDKWRSFMKNQIKRARMFFDEAEKGVTELSEA 361

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 362 SRWPVWASLLLYRQILDEIEANDYNNFTRRAYVSKAKKLLALPIAYTK 409


>gi|585749|sp|P37272|PSY_CAPAN RecName: Full=Phytoene synthase, chloroplastic; Flags: Precursor
 gi|433994|emb|CAA48155.1| phytoene synthase [Capsicum annuum]
 gi|190403695|gb|ACE78189.1| phytoene synthase 1 [Capsicum annuum]
 gi|296278628|gb|ADH04278.1| phytoene synthase [Capsicum annuum]
 gi|296278630|gb|ADH04279.1| phytoene synthase [Capsicum annuum]
 gi|296278632|gb|ADH04280.1| phytoene synthase [Capsicum annuum]
 gi|296278634|gb|ADH04281.1| phytoene synthase [Capsicum annuum]
 gi|296278636|gb|ADH04282.1| phytoene synthase [Capsicum annuum]
 gi|296278638|gb|ADH04283.1| phytoene synthase [Capsicum annuum]
 gi|296278640|gb|ADH04284.1| phytoene synthase [Capsicum annuum]
          Length = 419

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 95/287 (33%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL  +L  P  R ++  +Y +      + D          
Sbjct: 128 LLSEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPA 187

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+D  E                 L   V ++ +  Q F DMIE    D       +
Sbjct: 188 ALDRWEDRLEDVF---SGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRN 244

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 245 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 304

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+  +A + +  +    
Sbjct: 305 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARKFFDEAEKGVTELSAAS 364

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 365 RWPVLASLLLYRRILDEIEANDYNNFTKRAYVSKPKKLIALPIAYAK 411


>gi|56479329|ref|YP_160918.1| putative terpenoid synthase [Aromatoleum aromaticum EbN1]
 gi|56315372|emb|CAI10017.1| putative terpenoid synthase [Aromatoleum aromaticum EbN1]
          Length = 277

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 102/276 (36%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R ++  LY F  E+  + D   +      +L WW+
Sbjct: 5   EYCQDKAAKSGSSFYYSFLFLPPERRQAIIALYAFCREVDDIVDECNDVQVAQNKLDWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P  + L  ++ +++LP +   ++I+    D       D K  + 
Sbjct: 65  QEIARVYA---GAPSHPVGLALKDVLARFNLPREQMFEVIDGMEMDLRQTRYLDFKGLQL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R +S +  LA  I         L+     GIA  +  +I  +     RG++Y P++ 
Sbjct: 122 YCYRAASVVGLLAAEIFGYRDRQT-LKYAHDLGIALQLTNIIRDVGEDARRGRIYLPIED 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L G   D     ++  A+    +  +A + +  +      P  +  +I 
Sbjct: 181 LQRFEVPASQILEGHGGDNFRALMQFQADRARTFYDQAFQHLPAVDRKAQRPGIVMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            ++L      GF+++    +   + + W   S+ ++
Sbjct: 241 RTLLDEIARDGFQVLDRRTSLTPVRKLWIAGSTWVR 276


>gi|329908477|ref|ZP_08274867.1| Phytoene synthase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546704|gb|EGF31655.1| Phytoene synthase [Oxalobacteraceae bacterium IMCC9480]
          Length = 277

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 100/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y + L  P   R +++ LY F  E+    D   +      +L WW+
Sbjct: 5   EYCQQKAAQSGSSFYYSFLFLPTERRRAITALYAFCREVDDTVDECTDVGIARTKLHWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P ++ L   +  Y L  Q+ L +I+    D       D    + 
Sbjct: 65  SEIGAMLA---GTPTHPVTLALQPHMATYQLDGQHLLAIIDGMEMDLDQTRYLDYIGLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++  +  L+  I         L+  +  G+A  +  +I  +      G++Y P++ 
Sbjct: 122 YCWHVAGVVGILSASIFGYTDKQT-LQYAEKLGLAFQLTNIIRDVGEDARIGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+     L+ +++D+    ++           +A   +         P  +  +I 
Sbjct: 181 LQQFGVTAADLLAARHNDQFENLMRFQVRRAQAAYDEAFALLPAADRRSQRPGLMMSAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   ++ GF +++   +   + + W    + I+ 
Sbjct: 241 RALLSEIEHDGFHVLNQRISLTPIRKLWLAWRTYIRG 277


>gi|254423911|ref|ZP_05037629.1| Squalene and phytoene synthases superfamily [Synechococcus sp. PCC
           7335]
 gi|196191400|gb|EDX86364.1| Squalene and phytoene synthases superfamily [Synechococcus sp. PCC
           7335]
          Length = 311

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 110/293 (37%), Gaps = 16/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    +   +     Y+  LL P   R ++  +Y +      + D  +   T +  
Sbjct: 18  LQESYEQCRQITAECSKTFYMGTLLMPEAKRRAIWAIYVWCRRTDELVDGPQAKFTTEST 77

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   ES        +     V ++  + +Y+L  Q F DMI+    D Y       
Sbjct: 78  LDHWESTLESLF---SGHAKDNLDVAMVDTLERYELDIQPFRDMIDGQRMDLYRSRYTTF 134

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLIC 184
           ++ + Y +R++  +  ++T+++  +    +   +               GIA  +  ++ 
Sbjct: 135 EELKLYCYRVAGTVGLMSTVVMGMDTEINASPWMCSNPASPPIPEAVSLGIANQLTNILR 194

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL+ L      +E  L G   DR    ++   +  LKY  +A   + 
Sbjct: 195 DVGEDARRGRIYLPLEDLELFDYTQEDLLKGVIDDRWRALMRFQIQRALKYYQEAESGIS 254

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            + PD   P +  + +   +L     + + + +     ++  +  Y+  + ++
Sbjct: 255 RLHPDARWPVWTALMLYRKILDVIVENDYDVFNRRAYVSKARKLLYLPQALVR 307


>gi|220934696|ref|YP_002513595.1| putative terpenoid synthase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996006|gb|ACL72608.1| putative terpenoid synthase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 293

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 108/278 (38%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  P   R +++ LY F  E+  V D  + P     +L WW+
Sbjct: 5   QYCQDKAARSGSSFYYSFLFLPEQQRRAITALYAFCREVDDVVDECQEPDIARRKLDWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +               P    LL  + +Y+LP ++F ++I+    D   D+     +   
Sbjct: 65  EEIARVFA---GNPNHPVGKALLPAIERYNLPEEHFREIIDGMQMDLDYDAYPTFTELSL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++S +  +A  I   +    +       G+A  +  ++  +     RG++Y P+D 
Sbjct: 122 YCYRVASVVGLMAAEIFGYQDRQTTRYAHD-LGMAFQLTNILRDVHEDALRGRVYIPMDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           +   G++       Q S+ +    +  A     Y  +A E +  +         I  +I 
Sbjct: 181 MRRFGVEPRELQMPQASEHLKSLFEFQARRARDYYKRAFERLPEVDRPAQRSGIIMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +++L   +  G++++        + + W    ++ +++
Sbjct: 241 QTLLDEIEADGYRVLERRIRLTPIRKLWIAWRTARQEK 278


>gi|79154730|gb|ABB52068.1| putative phytoene synthase [Daucus carota subsp. sativus]
          Length = 438

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 96/288 (33%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 139 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 198

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   K             L   V ++ +  Q F DMIE    D       
Sbjct: 199 SALDRWELRLEDLFK---GRPFDMLDAALSDTVMKFPVDIQPFKDMIEGMRMDLKKSRYK 255

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  I+           +        G+A  +  ++  +   
Sbjct: 256 NFDELYLYCYYVAGTVGLMSVPIMGIAPNSQATTESVYNAALALGLANQLTNILRDVGED 315

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A+  +R + P 
Sbjct: 316 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKKQIKRARMFFDEAQIGVRELSPA 375

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 376 SRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKPKKILALPVAYAK 423


>gi|33602249|ref|NP_889809.1| putative phytoene synthase [Bordetella bronchiseptica RB50]
 gi|33576688|emb|CAE33765.1| putative phytoene synthase [Bordetella bronchiseptica RB50]
          Length = 287

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 104/277 (37%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R +++ LY F  E+  V D   +P    ++L WW+
Sbjct: 5   EYCQEKAARSGSSFYYSFLFLPPARRRAITALYAFCREVDDVVDECSDPSLARVKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +     +  +   P +  L   +   ++  +  L +I+    D       D      
Sbjct: 65  TQVDQ---MVDGKPDHPVTRALQPHLADCNITRERLLAVIDGMEMDLDQTRYLDWPGLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++  +  L+  +   +  + +L      G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCWHVAGVVGELSAGVFGYQD-ARTLDYAGKLGLAFQLTNIIRDVGDDARRGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+G +S+R S  ++  AE       +A + +         P  +  +I 
Sbjct: 181 LQQFEVKAADILNGVHSERFSALMRFQAERARGLYREAMQALPETDRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   + + W    + +  
Sbjct: 241 HALLDEIERDDWQVLHQRISLTPVRKLWLAWKTWVSG 277


>gi|126659791|ref|ZP_01730918.1| phytoene synthase [Cyanothece sp. CCY0110]
 gi|126618943|gb|EAZ89685.1| phytoene synthase [Cyanothece sp. CCY0110]
          Length = 310

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 109/306 (35%), Gaps = 18/306 (5%)

Query: 6   LTKNTRKEEKIFS--RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           L K  +  + + S         +  +      YL  LL P   R ++  +Y +      +
Sbjct: 4   LPKRPQPPKMLVSVEESYERCRQITQKYSKTFYLGTLLMPSEKRRAIWAIYVWCRRTDEL 63

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
            D  +   T    LQ W+D  +   KG   +      V L+  ++++ +  + F DMI  
Sbjct: 64  VDGPQAKYTTPETLQQWQDHLQCLFKGNPIDDED---VALVDTLQRFPVEIKPFEDMIAG 120

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------ 171
              D + +     +  + Y +R++  +  ++  +L  E+  +     K            
Sbjct: 121 QHMDLHRNRYETFEDLKLYCYRVAGTVGLMSNAVLGVEKQPSIGPWNKQLENYIPKEEAI 180

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             GIA  +  ++  +     RG++Y PL+ L            G   DR    +      
Sbjct: 181 ALGIANQLTNILRDVGEDAQRGRIYLPLEDLDRFNYTETDLFKGVIDDRWRELMAFQIRR 240

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +Y   A   +R +  D   P +  + + + +L   + + + + +         +  Y+
Sbjct: 241 ARQYYKDAERGIRILSRDSRWPVWAALMLYQGILDVIEANDYDVFNQRAFVRTPKKMVYL 300

Query: 291 LSSSIK 296
             + ++
Sbjct: 301 PIAWLR 306


>gi|148906078|gb|ABR16198.1| unknown [Picea sitchensis]
          Length = 418

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 96/291 (32%), Gaps = 9/291 (3%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
           +    ++ +           +     YL  LL  P  R ++  +Y +      + D    
Sbjct: 114 SPSTIELLNEAYERCGEVCAEYAKTFYLGTLLMTPDRRKAIWAIYVWCRRTDELVDGPNA 173

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                + L  W+   E      +          L   V +Y +  Q F DMIE    D  
Sbjct: 174 SHITPLALDRWEQRLEDLF---LGRPYDMLDAALSDTVLKYPVDIQPFRDMIEGMRMDLR 230

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLIC 184
                +  +   Y + ++  +  ++  I+           +        GIA  +  ++ 
Sbjct: 231 KSRYKNFNELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILR 290

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y P D L   GL  E   +G+ +DR    +K   +    +  +A + + 
Sbjct: 291 DVGEDACRGRIYLPQDELAQFGLSDEDIFAGKVTDRWRAFMKDQIKRARMFFDEAEKGVT 350

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +      P +  + +   +L   + + +   +      ++ +   +  + 
Sbjct: 351 ELDKASRWPVWASLILYRQILDAIEANDYDNFTKRAFVGKVKKFLSLPIAY 401


>gi|222107186|gb|ACM44688.1| phytoene synthase [Diospyros kaki]
 gi|224755491|gb|ACN62356.1| phytoene synthase [Diospyros kaki]
          Length = 435

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 93/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL     R ++  +Y +      + D         
Sbjct: 138 SLMTEAYDRCGEICAEYAKTFYLGTLLMTAERRRAIWAIYVWCRRTDELVDGHNASHITP 197

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 198 TALDRWELRLEDLFR---GRPFDMLDAALSDTVTKFPVDIQPFKDMIEGMRMDLKKSRYM 254

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 255 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQATTESVYNAALALGIANQLTNILRDVGED 314

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K       K+  +A + +  +   
Sbjct: 315 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRSFMKNQINRARKFFNEAEKGVTELSAA 374

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 375 SRWPVWASLLLYRQILDEIEANDYNNFTRRAFVSKPKKIIALPIAYAK 422


>gi|21553694|gb|AAM62787.1| phytoene synthase [Arabidopsis thaliana]
          Length = 422

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 95/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 185

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           M L  W+   E   +             L   V +Y +  Q F DMIE    D       
Sbjct: 186 MALDRWEARLEDLFR---GRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQ 242

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +      Y + ++  +  ++  ++  +        +        GIA  +  ++  +   
Sbjct: 243 NFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 302

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K+  +    +  +A + +  +   
Sbjct: 303 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAA 362

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      ++ +   +  +  K
Sbjct: 363 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 410


>gi|255688427|gb|ACU29637.1| phytoene synthase [Elaeagnus umbellata]
          Length = 436

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 95/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 136 SLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 195

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +     S       L   V ++ +  Q F DMIE    D +     
Sbjct: 196 KALDRWESRLEDLFE---GNSFDMLDAALSDTVARFPVDIQPFKDMIEGMRMDLWKSRYK 252

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GI+  +  ++  +   
Sbjct: 253 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQATTESIYNAALALGISNQLTNILRDVGED 312

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL      +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 313 ARRGRIYLPQDELAQAGLSDADIFAGKVTDKWRNFMKSQIKRARLFFDEAEKGVTELSAA 372

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      +  +  ++  +  K
Sbjct: 373 SRWPVWASLLLYRQILDEIEANDYDNFTKRAYVRKAKKLLFLPIAYTK 420


>gi|33596458|ref|NP_884101.1| putative phytoene synthase [Bordetella parapertussis 12822]
 gi|33566227|emb|CAE37135.1| putative phytoene synthase [Bordetella parapertussis]
          Length = 287

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 105/277 (37%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          + Y + L  PP  R +++ LY F  E+  V D   +P    ++L WW+
Sbjct: 5   EYCQEKAARSGSNFYYSFLFLPPARRRAITALYAFCREVDDVVDECSDPSLARVKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +     +  +   P +  L   +   ++  +  L +I+    D       D      
Sbjct: 65  TQVDQ---MVDGKPDHPVTRALQPHLADCNITRERLLAVIDGMEMDLDQTRYLDWPGLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++  +  L+  +   +  + +L      G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCWHVAGVVGELSAGVFGYQD-ARTLDYAGKLGLAFQLTNIIRDVGDDARRGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+G +S+R S  ++  AE       +A + +         P  +  +I 
Sbjct: 181 LQQFEVKAADILNGVHSERFSALMRFQAERARGLYREAMQALPETDRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   + + W    + +  
Sbjct: 241 HALLDEIERDDWQVLHQRISLTPVRKLWLAWKTWVSG 277


>gi|330427684|gb|AEC19018.1| putative phytoene synthase [Pusillimonas sp. T7-7]
          Length = 287

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 101/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y A L  PP  R +++ LY F  E+  V D   +P    M+L WW+
Sbjct: 5   EYCQNKAAKSGSSFYYAFLFLPPERRKAITALYAFCREVDDVVDECTDPSVARMKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              ES       ++  P +  L   V  YDL       ++E    D   D   D      
Sbjct: 65  SQIESMYA---GKAEHPVTQALEPHVHAYDLSADRLYAIVEGMEMDLDQDRYADWASLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +  +  +  L+  I    +    L   +  G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCWHAAGVVGELSASIFGYTQPET-LVYAEKLGLAFQLTNIIRDVGDDARRGRIYLPVED 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           +    +     ++G++SDR +  ++   +   +   +A   +         P  +  +I 
Sbjct: 181 MQKFNVTAAEIINGEHSDRFADLMRFQTDRARQCYREAVLALPEADRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   + +        +  
Sbjct: 241 HALLHEIERDNWQVLDQRISLTPIRKFGLAWKVWVGG 277


>gi|172038668|ref|YP_001805169.1| phytoene synthase [Cyanothece sp. ATCC 51142]
 gi|171700122|gb|ACB53103.1| phytoene synthase [Cyanothece sp. ATCC 51142]
          Length = 310

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 113/306 (36%), Gaps = 18/306 (5%)

Query: 6   LTKNTRKEEKIFS--RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           L K  +  + + S         +  +      YL  LL P   R ++  +Y +      +
Sbjct: 4   LPKRPQPPKMLVSVEESYERCRQITQKYSKTFYLGTLLMPSQKRRAIWAIYVWCRRTDEL 63

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
            D  +   T    LQ W++  E   KG   +      V L+  ++++ +  + F DMI  
Sbjct: 64  VDGPQAKYTTPETLQQWQNHLECLFKGHPMDDED---VALVDTLQRFPVEMKPFEDMIAG 120

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------ 171
              D Y +     +  + Y +R++  +  ++  +L  E+  +     K            
Sbjct: 121 QHMDLYRNRYETFEDLKLYCYRVAGTVGLMSNAVLGVEKQPSIGPWNKQLEDYIPKEEAI 180

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             GIA  +  ++  +     RG++Y PL+ L          L G   DR    ++   + 
Sbjct: 181 ALGIANQLTNILRDVGEDAQRGRIYLPLEDLDRFNYTETDLLKGVIDDRWRELMRFQIQR 240

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +Y  +A   +R +  D   P +  + + + +L   + + + + +         +  Y+
Sbjct: 241 ARQYYKEAERGIRILSRDSRWPVWAALMLYQGILDVIEANDYDVFNQRAFVRTPQKMVYL 300

Query: 291 LSSSIK 296
             + ++
Sbjct: 301 PIAWLR 306


>gi|75910990|ref|YP_325286.1| phytoene synthase [Anabaena variabilis ATCC 29413]
 gi|75704715|gb|ABA24391.1| phytoene synthase [Anabaena variabilis ATCC 29413]
          Length = 310

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 109/293 (37%), Gaps = 16/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YL  LL  P  R ++  +Y +      + D   + IT    
Sbjct: 17  VDESYKLCRHLTAKYAKTFYLGTLLMSPAKRQAIWAIYAWCRRTDELVDGPASAITTPET 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E+   G   E+     V L+  +++++L  Q F DMI     D +       
Sbjct: 77  LDLWEQHLEAMFAGHPKENYD---VALVDAIQRFNLDIQPFRDMIAGQRMDLHRSRYQTF 133

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLIC 184
           ++   Y +R++  +  ++T +++ +  + +    +              GIA  +  ++ 
Sbjct: 134 EELYLYCYRVAGTVGLMSTAVMEVDNTTNTAPWHQSKPLYIPTQEAIALGIANQLTNILR 193

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL+ L       + F +G   +R    ++   +   ++  +A + + 
Sbjct: 194 DVGEDARRGRIYIPLEDLARFNYTEQDFCNGVVDERWRSLMRFQIDRARQFYTEAEKGIT 253

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           ++ PD   P +    +   +L   + + + + S      Q  +   +  + ++
Sbjct: 254 HLAPDARWPVWAASMLYGQILDVIERNDYDVFSQRAYVPQWKKLRTLPIAWMR 306


>gi|15237933|ref|NP_197225.1| phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl
           transferase [Arabidopsis thaliana]
 gi|79328003|ref|NP_001031895.1| phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl
           transferase [Arabidopsis thaliana]
 gi|27735222|sp|P37271|PSY_ARATH RecName: Full=Phytoene synthase, chloroplastic; Flags: Precursor
 gi|2305107|gb|AAB65697.1| phytoene synthase [Arabidopsis thaliana]
 gi|10177068|dbj|BAB10510.1| phytoene synthase [Arabidopsis thaliana]
 gi|23306400|gb|AAN17427.1| phytoene synthase [Arabidopsis thaliana]
 gi|25083611|gb|AAN72095.1| phytoene synthase [Arabidopsis thaliana]
 gi|332005016|gb|AED92399.1| phytoene synthase [Arabidopsis thaliana]
 gi|332005017|gb|AED92400.1| phytoene synthase [Arabidopsis thaliana]
          Length = 422

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 95/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 185

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           M L  W+   E   +             L   V +Y +  Q F DMIE    D       
Sbjct: 186 MALDRWEARLEDLFR---GRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQ 242

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +      Y + ++  +  ++  ++  +        +        GIA  +  ++  +   
Sbjct: 243 NFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 302

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K+  +    +  +A + +  +   
Sbjct: 303 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAA 362

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      ++ +   +  +  K
Sbjct: 363 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 410


>gi|307151117|ref|YP_003886501.1| Phytoene synthase [Cyanothece sp. PCC 7822]
 gi|306981345|gb|ADN13226.1| Phytoene synthase [Cyanothece sp. PCC 7822]
          Length = 310

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 106/303 (34%), Gaps = 16/303 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
                +             +         YL  LL PP  R ++  +Y +      + D 
Sbjct: 7   PTQPTQPLASIEEAYELCRQITEKYSKTFYLGTLLMPPEKRQAIWAIYVWCRRTDELVDG 66

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
               +T    L  W+D  ES   G   +      V L+  ++++ +    F DMI     
Sbjct: 67  PNAKLTTPETLDRWEDHLESVFAGHPLDDAD---VALVDTLKRFPMDIAPFRDMIAGQRM 123

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAG 174
           D Y       ++   Y +R++  +  +++ +L  +    +    K              G
Sbjct: 124 DLYRSRYETFEELNLYCYRVAGTVGLMSSAVLGVDERYRTAPWEKDQPLYIPTEEAIALG 183

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           IA  +  ++  +     RG++Y PL+ L       E   +G   DR    ++       K
Sbjct: 184 IANQLTNILRDVGEDAGRGRIYLPLEDLKLFDYSEEDLFNGVIDDRWRALMRFQISRARK 243

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           Y  +A   +R + PD   P +  + + + +L   + + + + +         +  ++  +
Sbjct: 244 YYDEAERGIRALSPDSRWPVWSALMLYQGILDVIEMNDYDVFTKRAYVPTAQKMLFLPVA 303

Query: 294 SIK 296
            ++
Sbjct: 304 WLR 306


>gi|218438148|ref|YP_002376477.1| squalene/phytoene synthase [Cyanothece sp. PCC 7424]
 gi|218170876|gb|ACK69609.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7424]
          Length = 310

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 108/303 (35%), Gaps = 16/303 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
                              +         YL  LL PP  R ++  +Y +      + D 
Sbjct: 7   PTQPNPPLASLDEAYELCRQITEKYSKTFYLGTLLMPPEKRQAIWAIYVWCRRTDELVDG 66

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
            +  +T    L  W+   ES   G   +      V L+  ++++ +  Q F DMI     
Sbjct: 67  PQAKLTTPETLDNWEKHLESVFAGHPLDDAD---VALVDTLKRFPMDIQPFRDMIAGQRM 123

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAG 174
           D Y       ++ + Y +R++  +  +++ +L  +    +    K              G
Sbjct: 124 DLYRSRYETFEELQLYCYRVAGTVGLMSSAVLGIDERYRTAPWEKNQPLYIPQQEAIALG 183

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           IA  +  ++  +     RG++Y PL+ L      +E   +G   +R    ++   +   K
Sbjct: 184 IANQLTNILRDVGEDAGRGRIYLPLEDLDLFNYSQEDLFNGVIDERWRELMRFQIQRARK 243

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           Y  +A   +R +  D   P +  + + + +L   + + + + +         +  Y+  +
Sbjct: 244 YYTEAERGIRALNADSRWPVWAALMLYQGILDVIEMNDYDVFNQRAFVPTAKKMLYLPIA 303

Query: 294 SIK 296
            ++
Sbjct: 304 WLR 306


>gi|170522411|gb|ACB20515.1| phytoene synthase [Arabidopsis thaliana]
          Length = 422

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 95/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 185

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           M L  W+   E   +             L   V +Y +  Q F DMIE    D       
Sbjct: 186 MALDRWEARLEDLFR---GRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQ 242

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +      Y + ++  +  ++  ++  +        +        GIA  +  ++  +   
Sbjct: 243 NFDDLYLYCYYVAGAVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 302

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K+  +    +  +A + +  +   
Sbjct: 303 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAA 362

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      ++ +   +  +  K
Sbjct: 363 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 410


>gi|119512700|ref|ZP_01631773.1| phytoene synthase [Nodularia spumigena CCY9414]
 gi|119462667|gb|EAW43631.1| phytoene synthase [Nodularia spumigena CCY9414]
          Length = 310

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 101/293 (34%), Gaps = 16/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    + +       YL+ LL     R ++  +Y +      + D   + +T    
Sbjct: 17  VDESYKLCRQLIAKYSATFYLSTLLLSEEKRPAIWAIYAWCRRTDELVDGPGSAMTTPET 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   ES   G   E+     V L   VR++ +  Q F DMI     D Y       
Sbjct: 77  LDLWEKQLESIFAGQPVENYD---VALADTVRRFPMDIQPFRDMIAGQQMDLYRSRYETF 133

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLIC 184
           +    Y +R++  +  ++T ++  +    +                   GIA+ +  ++ 
Sbjct: 134 EDLYLYCYRVAGTVGLMSTSVMGLDETRNTAPWNCQQQPYMPTAEEIALGIAKQLTNILR 193

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL+ L       E    G   DR    ++       ++  KA   + 
Sbjct: 194 DVGEDAQRGRIYIPLEDLARFNYTEEDLFKGVVDDRWRSLMQFQISRARQFYTKAERGIT 253

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           Y+  D   P +  +     +L   + + + + +      Q  +   +  + ++
Sbjct: 254 YLSGDARWPVWAALMHYSRILSIIERNDYNVFTRRAYVPQWQKLRSLPVAWMR 306


>gi|56122551|gb|AAV74394.1| phytoene synthase [Adonis aestivalis var. palaestina]
          Length = 401

 Score =  225 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 96/288 (33%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL     R ++  +Y +      + D         
Sbjct: 102 SLLNEAYDRCREVCAEYAKTFYLGTLLMTQERRKAIWAIYVWCRRTDELVDGPNACHITP 161

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           M L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 162 MALDRWESRLEDLFR---GRPYDMLDAALSDTVSKFPVDIQPFKDMIEGMRLDLKKSRYN 218

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 219 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNILRDVGED 278

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+  L +K   +    +  +A + +  +   
Sbjct: 279 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRLFMKKQIKRARMFFDQAEKGITQLSSA 338

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   + ++  +
Sbjct: 339 SRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKSKKITALPAAYAR 386


>gi|255635258|gb|ACU17983.1| unknown [Glycine max]
          Length = 399

 Score =  225 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 95/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 100 SLLNEAYDRCGEICAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASQITP 159

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 160 TALDRWESRLEELFQ---GRPFDMLDAALADTVAKFPVDIQPFKDMIEGMRLDLKKPRYK 216

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  I+           +        GIA  +  ++  +   
Sbjct: 217 NFDELYLYCYYVAGTVGIMSVPIMGISPNSEATTESVYNAALALGIANQLTNILRDVGED 276

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 277 ASRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKSQIKRARMFFDEAEKGVTELNEA 336

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   + ++  +
Sbjct: 337 SRWPVWASLLLYRQILDEIEANDYNNFTRRAYVSKAKKFLSLPAAYAR 384


>gi|91775822|ref|YP_545578.1| squalene/phytoene synthase [Methylobacillus flagellatus KT]
 gi|91709809|gb|ABE49737.1| Squalene/phytoene synthase [Methylobacillus flagellatus KT]
          Length = 278

 Score =  225 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 111/279 (39%), Gaps = 6/279 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +            Y + L  P   R +++ LY F  E+  + D  ++      +L WW
Sbjct: 4   QEYCQNKAAASGSSFYYSFLFLPKAKREAITALYAFCREVDDIADDVQDVNVAQTKLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +    +  +    +   P ++ L S VR+  L  Q+FL++I     D   +   D ++ E
Sbjct: 64  RSEIINLFE---GKPQHPVTMALQSPVRELKLKQQHFLEIINGMQMDLEQNRYRDFEELE 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y +R++S +  L+  I            +   G+A  +  +   +     RG++Y PLD
Sbjct: 121 LYCYRVASVVGLLSASIFGYSNPQTLQYALD-LGMAFQLTNITRDVGEDGRRGRIYLPLD 179

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSI 259
            +   G+  +  L G+ SD +   ++   E   +Y  KA  E+            I  SI
Sbjct: 180 EISRFGVSEQDILQGKASDNMRQLLEFQVERAERYYEKALAELPLEDRKQQRTGLIMASI 239

Query: 260 TESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKK 297
             ++LK  +    + +++   +   + + W    + I+ 
Sbjct: 240 YRTLLKEIKRDDIQVVLNARVSLTPIRKLWLAWLTWIRN 278


>gi|285027181|gb|ADC34069.1| phytoene synthase [Cucumis melo]
          Length = 421

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  +L  P  + ++  +Y +      + D         
Sbjct: 131 SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITP 190

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 191 TALDRWEARLEELFQ---GRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYK 247

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 248 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNILRDVGED 307

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 308 ARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKA 367

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 368 SRWPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGR 415


>gi|298491653|ref|YP_003721830.1| phytoene synthase ['Nostoc azollae' 0708]
 gi|298233571|gb|ADI64707.1| Phytoene synthase ['Nostoc azollae' 0708]
          Length = 310

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 102/293 (34%), Gaps = 16/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YL  LL  P  R S+  +Y +      + D   + IT    
Sbjct: 17  VDESYKLCQELTAKYAKTFYLGTLLMSPAKRQSVWAIYAWCRRTDELVDGPASTITTPET 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   ES         +  + V L+  ++++ +  Q F DMI     D Y       
Sbjct: 77  LDLWEKQLESIFA---GHPLDNYDVALVDTLQRFHMDIQPFRDMINGQRMDLYRSRYQTF 133

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLIC 184
           ++   Y +R++  +  ++T I+  +    +    +              GIA  +  ++ 
Sbjct: 134 EELYLYCYRVAGTVGLMSTTIMGIDTNIYTAPWHQDQQPYLPIEEAIALGIANQLTNILR 193

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL+ L       E F      DR    I+   +   K+  KA   + 
Sbjct: 194 DVGEDARRGRIYIPLEDLAKFNYTEEDFFKSIVDDRWRSLIRFEIDRARKFYTKADRGIS 253

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           Y+  D   P +    +   +L   + + + + +      Q  +   + ++ ++
Sbjct: 254 YLAADARWPVWSASMLYGQILDVIERNDYDVFNQRAYVPQWKKLRTLPAAWMR 306


>gi|262036862|dbj|BAI47572.1| phytoene synthase [Ipomoea sp. Kenyan]
          Length = 439

 Score =  225 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 96/287 (33%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL  +L  P  R ++  +Y +      + D          
Sbjct: 141 VLSEAYDRCGEVCAEYAKTFYLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPT 200

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+ + E   +             L   V ++ +  Q F DMIE    D +     +
Sbjct: 201 ALDRWEAMLEDVFR---GRPFDMLDAALSDTVSRFPVDIQPFRDMIEGMRMDLWKSRYDN 257

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        GIA  +  ++  +    
Sbjct: 258 FDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 317

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+    +K   +   K+  +A   +  +    
Sbjct: 318 RRGRVYLPQDELAQAGLCDEDIYAGKVTDKWRNFMKKQIKRARKFFDEAERGVTELGSAS 377

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 378 RWPVWASLLLYRKILDEIEANDYNNFTRRAYVSKPKKLLALPIAYAK 424


>gi|284928698|ref|YP_003421220.1| phytoene synthase [cyanobacterium UCYN-A]
 gi|284809157|gb|ADB94862.1| phytoene synthase [cyanobacterium UCYN-A]
          Length = 310

 Score =  224 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 112/306 (36%), Gaps = 18/306 (5%)

Query: 6   LTKNTRKEEKIFS--RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + K  +  + + S         R  +      YL  LL PP  R ++  LY +      +
Sbjct: 4   IPKTPQTPKALNSVLEAYERCRRITQKYSKTFYLGTLLMPPKKRCAIWALYVWCRRTDEL 63

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
            D A+   T    LQ W++  E    G   +      V L+  +R + +    F DMI  
Sbjct: 64  VDGAQANFTTPETLQQWENNLEHLFAGYPLDDED---VALVDTLRNFPIEITPFKDMIAG 120

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------ 171
              D Y +      + + Y +R++  +  ++  +L  E + + +                
Sbjct: 121 QKMDLYRNRYQTFDELKLYCYRVAGTVGLMSNAVLGVEEHPSIVPWESQFKQNIPKEEAI 180

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             GIA  +  ++  +     RG++Y PL+ L       E   +G   DR    +    + 
Sbjct: 181 ALGIANQLTNILRDIGEDAQRGRIYLPLEDLERFKYTEEDLFNGVIDDRWKNLMNFQIQR 240

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +Y  +A   +R +  D   P +  + + + +L   + + + + S         +  Y+
Sbjct: 241 ARQYYKEAERGIRILSRDSRWPVWSALMLYQGILDIIEANEYDVFSKRAFVPNFKKIIYL 300

Query: 291 LSSSIK 296
             + ++
Sbjct: 301 PIAWLR 306


>gi|163857476|ref|YP_001631774.1| putative phytoene synthase [Bordetella petrii DSM 12804]
 gi|163261204|emb|CAP43506.1| putative phytoene synthase [Bordetella petrii]
          Length = 287

 Score =  224 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 95/277 (34%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R +++ LY F  E+  V D   +P    ++L WW+
Sbjct: 5   DYCQEKAAKSGSSFYYSFLFLPPERRRAITALYAFCREVDDVVDECSDPSVARIKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +    G +     P    L   +    +  +    +I+    D       D      
Sbjct: 65  TQVDHLFAGQVE---HPVMRALQPHLESCGISRERMQAVIDGMEMDLDQTRYLDWPGLRK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +  +  +  L+  +             K  G+A  +  +I  +     RG++Y P+D 
Sbjct: 122 YCWHAAGVVGELSAGVFGYADPRTLEYAGK-LGLAFQLTNIIRDVGDDARRGRIYLPVDD 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+G  SDR +  ++   E   +   +A   +         P  +  +I 
Sbjct: 181 LQRFDVKAAEILNGTYSDRFTALMRFQTERARQLYGEAMASLPETDRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   ++++    +   L + W    + +  
Sbjct: 241 HALLDEIERDEWQVLHQRISLTPLRKLWLAWKTWVGG 277


>gi|253996546|ref|YP_003048610.1| squalene synthase HpnD [Methylotenera mobilis JLW8]
 gi|253983225|gb|ACT48083.1| squalene synthase HpnD [Methylotenera mobilis JLW8]
          Length = 280

 Score =  224 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 6/278 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + +  P   R +++ LY F  E+  V D         ++L WWK
Sbjct: 5   QYCQEKAAKSGSSFYYSFMFLPKQKREAITALYAFCREVDDVVDECTELKVAQVKLAWWK 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           D   +  +    + I P +  L  +++QY L  ++FL++I+    D   +   D KQ + 
Sbjct: 65  DEIRNLYQN---KPIHPVTKALEPVIKQYQLSEEHFLEIIDGMEMDLNFNRYEDFKQLQL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++S +  L+  I   +     L+     G+A  +  +I  +     R ++Y PLD 
Sbjct: 122 YCYRVASVVGILSAQIFGFKNRKT-LKFAHDLGMAFQLTNIIRDVGEDARRNRIYIPLDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSIT 260
           L    +  E  L  + S+ +   ++   E    Y  KA  E+            I  +I 
Sbjct: 181 LARFNITEEDILRSRESEAVKKLLENQIERAETYYDKALHELPAEDKKSQRVGLIMTAIY 240

Query: 261 ESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L+  +  G + +++   +   L + W   S+ +K 
Sbjct: 241 RTLLREIKADGAEKVLNARISLGTLRKLWISFSTWVKH 278


>gi|413732|gb|AAA32836.1| phytoene synthase [Arabidopsis thaliana]
          Length = 423

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 95/287 (33%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL  LL  P  R ++  +Y +      + D         M
Sbjct: 128 LVGEAYDRCGEVCAEYPKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPM 187

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E   +             L   V +Y +  Q F DMIE    D       +
Sbjct: 188 ALDRWEARLEDLFR---GRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQN 244

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
                 Y + ++  +  ++  ++  +        +        GIA  +  ++  +    
Sbjct: 245 FDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDA 304

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+    +K+  +    +  +A + +  +    
Sbjct: 305 RRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAAS 364

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +      ++ +   +  +  K
Sbjct: 365 RWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 411


>gi|297811867|ref|XP_002873817.1| phytoene synthase [Arabidopsis lyrata subsp. lyrata]
 gi|297319654|gb|EFH50076.1| phytoene synthase [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 95/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 125 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 184

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           M L  W+   E   +             L   V +Y +  Q F DMIE    D       
Sbjct: 185 MALDRWEARLEDLFR---GRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLRKSRYQ 241

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +      Y + ++  +  ++  ++  +        +        GIA  +  ++  +   
Sbjct: 242 NFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 301

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K+  +    +  +A + +  +   
Sbjct: 302 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAA 361

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      ++ +   +  +  K
Sbjct: 362 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAK 409


>gi|16330440|ref|NP_441168.1| phytoene synthase [Synechocystis sp. PCC 6803]
 gi|585010|sp|P37294|CRTB_SYNY3 RecName: Full=Phytoene synthase
 gi|47569|emb|CAA48922.1| phytoene synthase [Synechocystis sp. PCC 6803]
 gi|1652930|dbj|BAA17848.1| phytoene synthase [Synechocystis sp. PCC 6803]
          Length = 337

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 101/297 (34%), Gaps = 15/297 (5%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           K             +         YL  LL PP  R ++  +Y +      + D  +   
Sbjct: 40  KPCASVEEAYEICRQVTAQYAKTFYLGTLLMPPAKRRAIWAIYLWCRRTDELVDGPQAAT 99

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
           T    L  W+   E    G   +      V L+  +  + L  Q F DMI     D Y  
Sbjct: 100 TTPETLDHWERRLEGIFAGQPQDDAD---VALVDTLETFPLDIQPFRDMIAGQRMDLYRS 156

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMI-----------LDSERYSASLRVIKYAGIAQFIG 180
                ++ + Y +R++  +  +++ +              +            G+A  + 
Sbjct: 157 RYQTFEELDLYCYRVAGTVGLMSSAVLGVDTGNGQAPWQPDAVYIPQEEAIALGVANQLT 216

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  +     RG++Y PL+ L       +  L+G N DR    +K   +    Y   A 
Sbjct: 217 NILRDVGEDVERGRIYLPLEDLERFNYSEQDLLNGVNDDRWRSLMKFEIDRARHYFEDAE 276

Query: 241 EEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +R +  D   P +  + + + +L   + + + + +         +  Y+  + ++
Sbjct: 277 RGIRALNRDARWPVWTALMLYKGILDVIEANNYNVFNRRAYVPTPKKLLYLPVAWLR 333


>gi|254490998|ref|ZP_05104179.1| Squalene and phytoene synthases superfamily [Methylophaga
           thiooxidans DMS010]
 gi|224463511|gb|EEF79779.1| Squalene and phytoene synthases superfamily [Methylophaga
           thiooxydans DMS010]
          Length = 282

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 109/278 (39%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + +  PP  R +++ LY F  E+    D   +P      L WW+
Sbjct: 5   EYCKDKAAKSGSSFYYSFMFLPPQKRQAITALYAFCREVDDAVDEIADPDVAAKTLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              E +          P    L + +  ++L  +YFL++I+    D         K    
Sbjct: 65  TEIEQTFN---GSPTHPVGKSLKTALEHFELHQEYFLEIIDGMEMDLQQHRYPAFKHLAL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  R++S +  LA  I   +     L+  +  G+A  +  +I  +     RG++Y P + 
Sbjct: 122 YCHRVASVVGLLAAEIFGYQNRKT-LKYAEKLGLAFQMTNIIRDVREDAERGRVYLPQED 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSIT 260
           L    +D +  L+ + +  ++  ++   E    +  +A+  +      +     I  +I 
Sbjct: 181 LDRFHVDVDDILALKQTPALTALLQFETERARHFYQEAKAALPAEDRFNQRTGLIMSAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           E+ L   +  GF+++ H  +   L + W    ++ K++
Sbjct: 241 EATLDELEKEGFQVMQHRISLTPLRKLWLAWRTARKEK 278


>gi|60418981|gb|AAX19898.1| phytoene synthase [Salicornia europaea]
          Length = 419

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 92/290 (31%), Gaps = 9/290 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL   L  P  R ++  +Y +      + D         
Sbjct: 121 SLLGEAYDRCGEVCAEYAKTFYLGTQLMTPTRRKAIWAIYVWCRRTDELVDGPNASHITP 180

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E                 L   V ++ +  Q F DMIE    D       
Sbjct: 181 TALDRWEARLEDLF---SGRPFDMLDAALCDTVTRFPIDIQPFKDMIEGMRLDLRKSRYK 237

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 238 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKAPTESVYNAALALGIANQLTNILRDVGED 297

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 298 SRRGRVYLPQDELAQAGLSDEDIFTGKVTDKWRNFMKKQIKRARMFFDEAEKGVSELSAA 357

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              P +  + +   +L   + + +   +     ++  +   +  +  K +
Sbjct: 358 SRWPVWASLLLYREILDEIEANDYNNFTKRAYVSKAKKLLALPIAYAKAK 407


>gi|254414171|ref|ZP_05027938.1| Squalene and phytoene synthases superfamily [Microcoleus
           chthonoplastes PCC 7420]
 gi|196178846|gb|EDX73843.1| Squalene and phytoene synthases superfamily [Microcoleus
           chthonoplastes PCC 7420]
          Length = 299

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 108/291 (37%), Gaps = 15/291 (5%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           S       +         YLA LL P   R ++  +Y++      + D  +  +T    L
Sbjct: 8   SEAYEICRQITAKYAKTFYLATLLMPEQKRRAIWAIYFWCRRTDELVDGPQARLTTPETL 67

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             W+   ES   G   E      V L+  ++++ +  Q F DMI     D Y       +
Sbjct: 68  DRWEQQLESVFAGQPIEDAD---VALVDTLQRFPMDIQPFRDMIAGQRMDLYRSRYETFE 124

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----------YAGIAQFIGQLICQL 186
           + + Y +R++  +  + + +L  +   +                   GIA+ +  ++  +
Sbjct: 125 ELKLYCYRVAGTVGLMTSPVLGFDLDWSQTPWNSQFGTNPVEEAIALGIAKQLTNILRDV 184

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG++Y PLD L       E    G   +R    ++   +   K+   A + +  +
Sbjct: 185 GEDAQRGRIYLPLDELALFNYTEEDLFKGVVDERWQELMRFQIQRARKFYTYAEKGIGAL 244

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             D   P +    + + +L   +++ + + +     ++  +  Y+  + ++
Sbjct: 245 SRDARWPVWAATMLYQGILDVIEHNNYDVFTQRAYVSKGRKLLYLPVAWLR 295


>gi|9971814|gb|AAG10427.1| phytoene synthase [Tagetes erecta]
          Length = 422

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 93/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL  +L  P  + ++  +Y +      + D          
Sbjct: 122 LLSEAYNRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPK 181

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DMIE    D       +
Sbjct: 182 ALDRWESRLEDLFN---GRPFDMLDAALSDTVSKFPVDIQPFKDMIEGMRMDLRKSRYQN 238

Query: 136 CKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+  +        +        GIA  +  ++  +    
Sbjct: 239 FDELYLYCYYVAGTVGLMSVPIMGIDPESQATTESVYNAALALGIANQLTNILRDVGEDA 298

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   S + +D+    +K   +    +  +A++ +  +    
Sbjct: 299 RRGRVYLPQDELAQAGLSDEDIFSEKVTDKWRYFMKKQIKRARSFFDEAQQGVTQLSSAS 358

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 359 RWPVSASLFLYRQILDEIEANDYNNFTKRAYVSKSKKLVSLPVAYAK 405


>gi|225466263|ref|XP_002271575.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 437

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 94/290 (32%), Gaps = 9/290 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            + + S           +     YL  +L  P  R ++  +Y +      + D       
Sbjct: 137 TQSLLSEAYDRCGEVCAEYAKTFYLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASHI 196

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L  W+   E   +             L   V ++ +  Q F DMIE    D     
Sbjct: 197 TPTALDRWESRLEDLFQ---GRPFDMLDAALSDTVAKFPVDIQPFKDMIEGMRMDLRKSR 253

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLP 187
             +  +   Y + ++  +  ++  ++           +  +     GIA  +  ++  + 
Sbjct: 254 YRNFDELYLYCYYVAGTVGLMSVPVMGIAPESQATTESVYKAALALGIANQLTNILRDVG 313

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               RG++Y P D L   GL  E    G+ +D+    +K   +    +  +A + +  + 
Sbjct: 314 EDARRGRIYLPQDELAQAGLSDEDIFMGRVTDKWRSFMKDQIKRARMFFDEAEKGITELS 373

Query: 248 PDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                P +    +   +L   + + +   +     ++  +   +  +  +
Sbjct: 374 SASRWPVWASFLLYRQILDEIEANDYNNFTRRAYVSKAKKIVALPLAYAR 423


>gi|150014709|gb|ABR57229.1| phytoene synthase [Solanum lycopersicum]
          Length = 412

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 93/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +      L  +L  P  R ++  +Y +      + D          
Sbjct: 116 LLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPA 175

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++  E                 L   V  + +  Q F DMIE    D       +
Sbjct: 176 ALDRWENRLEDVFN---GRPFDVLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKN 232

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 233 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 292

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K       K+  +A + +  +    
Sbjct: 293 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSAS 352

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 353 RFPVWASLVLYRKILDEIEANDYNNFTKRAYVSKSKKLIALPIAYAK 399


>gi|585747|sp|P37273|PSY2_SOLLC RecName: Full=Phytoene synthase 2, chloroplastic; Flags: Precursor
 gi|437020|gb|AAA34187.1| phytoene synthase [Solanum lycopersicum]
          Length = 310

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 95/287 (33%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL  +L  P  R ++  +Y +      + D          
Sbjct: 12  LLSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIYVWCRRTDELVDGPNASHITPQ 71

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DM+E    D +     +
Sbjct: 72  ALDRWEARLEDIFN---GRPFDMLDAALSDTVSRFPVDIQPFRDMVEGMRMDLWKSRYNN 128

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 129 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 188

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+  +A + +  +    
Sbjct: 189 RRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIQRARKFFDEAEKGVTELSSAS 248

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 249 RWPVLASLLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIAYAR 295


>gi|21360353|gb|AAM45379.1| phytoene synthase [Tagetes erecta]
          Length = 399

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 93/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + +           +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 103 LLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPK 162

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DMI+    D       +
Sbjct: 163 ALDRWESRLEDLYN---GRPFDMLDAALSDTVSKFPVDIQPFKDMIDGMRMDLRKSRYQN 219

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+      +    +        GIA  +  ++  +    
Sbjct: 220 FDELYLYCYYVAGTVGLMSVPIMGIAPESNAPTESVYNAALGLGIANQLTNILRDVGEDA 279

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   + + +D+    +K   +    +  +A E +  +    
Sbjct: 280 RRGRVYLPQDELAQAGLSDEDIFALKVTDKWRFFMKKQIKRARTFFDQAEEGVTQLSSAS 339

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 340 RWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKPKKIVALPIAYAK 386


>gi|585746|sp|P08196|PSY1_SOLLC RecName: Full=Phytoene synthase 1, chloroplastic; AltName:
           Full=Fruit-ripening-specific protein pTOM5; Flags:
           Precursor
 gi|170416|gb|AAA34153.1| phytoene synthetase [Solanum lycopersicum]
 gi|120969566|gb|ABM45872.1| phytoene synthase [Solanum lycopersicum var. cerasiforme]
 gi|120969570|gb|ABM45873.1| phytoene synthase [Solanum lycopersicum]
 gi|120969573|gb|ABM45874.1| phytoene synthase [Solanum lycopersicum var. cerasiforme]
 gi|155965505|gb|ABU40772.1| phytoene synthase 1 [Solanum lycopersicum]
 gi|155965507|gb|ABU40773.1| phytoene synthase 1 [Solanum lycopersicum]
          Length = 412

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 93/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +      L  +L  P  R ++  +Y +      + D          
Sbjct: 116 LLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPA 175

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++  E                 L   V  + +  Q F DMIE    D       +
Sbjct: 176 ALDRWENRLEDVFN---GRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKN 232

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 233 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 292

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K       K+  +A + +  +    
Sbjct: 293 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSAS 352

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 353 RFPVWASLVLYRKILDEIEANDYNNFTKRAYVSKSKKLIALPIAYAK 399


>gi|121605855|ref|YP_983184.1| squalene/phytoene synthase [Polaromonas naphthalenivorans CJ2]
 gi|120594824|gb|ABM38263.1| farnesyl-diphosphate farnesyltransferase [Polaromonas
           naphthalenivorans CJ2]
          Length = 293

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 99/278 (35%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V +         Y A L  PP  R +++  Y F  E+  V D   +P     +L WW+
Sbjct: 18  NYVQQKAAASGSSFYYAFLFLPPEKRAAITAFYAFCREIDDVVDEVTDPGVAHTKLGWWQ 77

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                S          P    L+ +   Y +  ++   +IE    D   +   D    + 
Sbjct: 78  GEVSKSF---TGNPTHPVMKALMPMTATYGIEARHLQAVIEGCQMDLTQNRYLDFPALQR 134

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I   +   A+       G+A  +  +I  +     RG++Y P++ 
Sbjct: 135 YCHLVAGIVGEVAARI-FGQTDDATTAYAHKLGLAFQLTNIIRDVGEDAMRGRIYLPVNE 193

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +     L  Q SDR +  +K   E  L    +A   +         P  +  SI 
Sbjct: 194 LQQFDVKAHEVLKRQYSDRFTALMKFQTERALGLYDEALALLPAADRRAQKPGLMMASIY 253

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+      ++++    +   L + W    +    +
Sbjct: 254 RTLLREIAADNYQVLHQRVSLTPLRKFWLAWKTQALGK 291


>gi|302801540|ref|XP_002982526.1| hypothetical protein SELMODRAFT_116607 [Selaginella moellendorffii]
 gi|300149625|gb|EFJ16279.1| hypothetical protein SELMODRAFT_116607 [Selaginella moellendorffii]
          Length = 341

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 95/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 44  DLLEEAYTRCGEICAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNAAHITP 103

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E      +          L   V +Y +  Q F DMIE    D       
Sbjct: 104 TALDRWEQRLEDLF---VGRPFDMLDGALADTVSKYPVDIQPFRDMIEGMRLDLVKSRYK 160

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++      +    +        GIA  +  ++  +   
Sbjct: 161 NFDELYLYCYYVAGTVGLMSVPVMGIAPESNASVESVYNAGLALGIANQLTNILRDVGED 220

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +++    +K       K+  +A   +  +  D
Sbjct: 221 AGRGRVYLPQDELAKFGLSDEDIFAGKVTNKWRAFMKDQITRARKFFKEAELGVMELDKD 280

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + + + +L   + + +          +  +   + S+ ++
Sbjct: 281 SRWPVWASLLLYQQILDSIEANDYDNFKRRAYVGKWKKLVSLPSAYVR 328


>gi|302798581|ref|XP_002981050.1| hypothetical protein SELMODRAFT_233658 [Selaginella moellendorffii]
 gi|300151104|gb|EFJ17751.1| hypothetical protein SELMODRAFT_233658 [Selaginella moellendorffii]
          Length = 341

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 44  DLLEEAYTRCGEICAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNAAHITP 103

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E      +          L   V +Y +  Q F DMIE    D       
Sbjct: 104 TALDRWEQRLEDLF---VGRPFDMLDGALADTVSKYPVDIQPFRDMIEGMRLDLVKSRYK 160

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++      +    +        GIA  +  ++  +   
Sbjct: 161 NFDELYLYCYYVAGTVGLMSVPVMGIAPESNASVESVYNAGLALGIANQLTNILRDVGED 220

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +++    +K        +  +A   +  +  D
Sbjct: 221 AGRGRVYLPQDELAKFGLSDEDIFAGKVTNKWRAFMKDQITRARMFFKEAELGVMELDKD 280

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + + + +L   + + +          +  +   + S+ ++
Sbjct: 281 SRWPVWASLLLYQQILDSIEANDYDNFKRRAYVGKWKKLVSLPSAYVR 328


>gi|119898175|ref|YP_933388.1| putative phytoene synthase [Azoarcus sp. BH72]
 gi|119670588|emb|CAL94501.1| putative phytoene synthase [Azoarcus sp. BH72]
          Length = 277

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 103/277 (37%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + +  PP  R +++ LY F  E+  V D   +     ++L WW+
Sbjct: 5   DYCQDKAAKSGSSFYYSFMFLPPERRQAITALYAFCREVDDVVDECHDVSLAHIKLDWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                  +        P  + L  +  ++ LP    L++I+    D       D K  + 
Sbjct: 65  QEV---GRVFGGTPTHPVGLALQDVTARFRLPQARLLEIIDGMAMDLSQSRYLDFKGLQL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++S +  LA  I         L      G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCYRVASVVGLLAAEIFGYTDPRT-LDYAHDLGLAFQLTNIIRDVGEDARRGRIYLPIED 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L  ++SDR    +   AE    Y   A  ++         P  +  +I 
Sbjct: 181 LQRFQVPANEILEARHSDRFVALMAFQAERAEGYYHSAFAKLPAADRKSQRPGLVMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  GFK++    +   L + W    + +K 
Sbjct: 241 RALLDEIRRDGFKVLDRRTSLTPLRKVWLAGWTWVKG 277


>gi|168046582|ref|XP_001775752.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672904|gb|EDQ59435.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 432

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 96/288 (33%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
           ++     +       +     YL   L  P  + ++  +Y +      + D         
Sbjct: 134 ELLDEAYVRCGEVCAEYAKTFYLGTKLMTPERQRAIWAIYVWCRRTDELVDGPNASRITP 193

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+D  E   +    +        L   V ++ +  Q F DMI+    D       
Sbjct: 194 TALDRWEDRLEDIFR---GQPYDMLDAALADTVTKFPVDIQPFRDMIDGMRMDLVKSRYA 250

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 251 NFDELYLYCYNVAGTVGLMSVPVMGIAPESKATTESIYSNALALGIANQLTNILRDVGED 310

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL       G+ +D+    +K   +    +  +A + +R +  D
Sbjct: 311 ARRGRVYLPQDELARFGLSDADIFVGKVTDKWRAFMKDQIKRARVFFVEAEKGVRELDKD 370

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + + + +L   + + +   +      +  +   +  +  +
Sbjct: 371 SRWPVWSALILYQQILDAIEANDYDNFTKRAYVGKWKKLASLPIAYGR 418


>gi|291613903|ref|YP_003524060.1| squalene synthase HpnD [Sideroxydans lithotrophicus ES-1]
 gi|291584015|gb|ADE11673.1| squalene synthase HpnD [Sideroxydans lithotrophicus ES-1]
          Length = 277

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 102/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y +    P   R +++ LY F  E+  V D   +       L WW+
Sbjct: 5   EYCQDKAASSGSSFYNSFRFLPRDKRRAITALYAFCREVDDVVDECSDASVARTTLNWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +   +       +   P +  L  IVRQ++L  ++FL++I+    D       D K  + 
Sbjct: 65  NEVVAVY---SGKPQHPVTQALSPIVRQFNLAQEHFLEIIDGMEMDLDQPRYPDFKSLQL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++S +  L+  I         L+     GIA  +  +I  +     R ++Y P+D 
Sbjct: 122 YCYRVASVVGLLSVEIFGYTDRQT-LKYAHDLGIALQLTNIIRDVGEDARRNRIYLPMDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-AFIPVSIT 260
           +   G+     L+ + ++     +    E   +Y  +A   +            I  ++ 
Sbjct: 181 MQQFGVSAADILNARETEGFQKLMAFQIERAQRYYQQALGHLPKADRKAQCTGLIMAAVY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           ++ L      G  ++    +     + W  L + ++ 
Sbjct: 241 QATLNEVAASGCHVLKERVSLTPTYKFWLALKTWLRN 277


>gi|257058220|ref|YP_003136108.1| Phytoene synthase [Cyanothece sp. PCC 8802]
 gi|256588386|gb|ACU99272.1| Phytoene synthase [Cyanothece sp. PCC 8802]
          Length = 310

 Score =  223 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 103/300 (34%), Gaps = 16/300 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +K             +         YL   L PP  R ++  +Y +      + D  + 
Sbjct: 10  PQKNLTSVDEAYELCRQITAKYSKTFYLGTALMPPEKRQAIWAIYVWCRRTDELVDGPQA 69

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
             T    LQ W+D  E          +    V L+  + ++ +    F DMI     D Y
Sbjct: 70  QFTTLETLQEWEDHLEMVF---SGHPLDDLDVALVDTLERFPIKIDPFRDMIAGQRMDLY 126

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY------------AGIAQ 177
                  ++ + Y +R++  +  ++  ++  +   + +    +             GIA 
Sbjct: 127 RSRYETFEELKLYCYRVAGTVGLMSNAVIGVDGDGSRVPWRSHRDHYIPEEEAIALGIAN 186

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +  ++  +     RG++Y PL+ L      +E    G   +R    ++   E    Y  
Sbjct: 187 QLTNILRDVGEDAQRGRIYLPLEDLERFNYSQEDLFKGVIDERWRELMRFQIERARHYYR 246

Query: 238 KAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           ++   + ++  D   P +  + + + +L   + + + +           +  Y+  + ++
Sbjct: 247 ESERGICHLCRDSRWPVWSALMLYQGILDVIEANNYDVFKKRAFVPTAKKMLYLPVAWLR 306


>gi|224135093|ref|XP_002327564.1| predicted protein [Populus trichocarpa]
 gi|222836118|gb|EEE74539.1| predicted protein [Populus trichocarpa]
          Length = 435

 Score =  223 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 93/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 135 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 194

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMI+    D       
Sbjct: 195 TALDRWEARLEDLFQ---GRPFDMMDAALADTVGKFPVDIQPFKDMIQGMRMDLRKSRYQ 251

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 252 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNILRDVGED 311

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 312 ARRGRVYLPQDELAQAGLSDDDIFAGKVTDKWRNFMKNQIKRARMFFDEAEKGVTELSAA 371

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      +  +   +  +  K
Sbjct: 372 SRWPVWASLLLYRQILDEIEANDYNSFTKRAYVRKAKKIVALPVAYAK 419


>gi|282898587|ref|ZP_06306575.1| Squalene/phytoene synthase [Cylindrospermopsis raciborskii CS-505]
 gi|281196455|gb|EFA71364.1| Squalene/phytoene synthase [Cylindrospermopsis raciborskii CS-505]
          Length = 310

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 101/293 (34%), Gaps = 16/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YL  LL  P  R S+  +Y +      + D      T    
Sbjct: 17  VHESYKLCQELTAKYAKTFYLGTLLMSPTKRQSVWAIYAWCRRTDELVDGPAATKTTPET 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   +S   G   ++     V L+  ++ + L  Q F DMI     D Y       
Sbjct: 77  LAQWETQLDSIFAGCPLDNYD---VALVDTLQHFPLEIQPFRDMIAGQRMDLYRSRYETF 133

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLIC 184
           +    Y +R++  +  ++T I+  +    S    +              GIA  +  ++ 
Sbjct: 134 EDLYLYCYRVAGTVGLMSTTIMGVDTNVYSAPWYRDIQPYLPVEEAIALGIANQLTNILR 193

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL+ L       E  L G   DR    ++   +   ++  KA   + 
Sbjct: 194 DVGEDARRGRIYIPLEDLKKFSYSPEELLQGVLDDRWRSLMRFQIKRAREFYTKADRGIS 253

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           Y+  D   P +    +   +L   + + +++ +      QL +   +  + ++
Sbjct: 254 YLAQDARWPVWAASMLYGKILDVIERNDYQVFNQRAYVPQLQKISTLPLAWMR 306


>gi|218245194|ref|YP_002370565.1| Squalene/phytoene synthase [Cyanothece sp. PCC 8801]
 gi|218165672|gb|ACK64409.1| Squalene/phytoene synthase [Cyanothece sp. PCC 8801]
          Length = 310

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 103/300 (34%), Gaps = 16/300 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +K             +         YL   L PP  R ++  +Y +      + D  + 
Sbjct: 10  PQKNLTSVDEAYELCRQITAKYSKTFYLGTALMPPEKRQAIWAIYVWCRRTDELVDGPQA 69

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
             T    LQ W+D  E          +    V L+  + ++ +    F DMI     D Y
Sbjct: 70  QFTTLETLQEWEDHLEMVF---SGHPLDDLDVALVDTLERFPIKIDPFRDMIAGQRMDLY 126

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY------------AGIAQ 177
                  ++ + Y +R++  +  ++  ++  +   + +    +             GIA 
Sbjct: 127 RSRYETFEELKLYCYRVAGTVGLMSNAVIGVDGDGSRVPWRSHRDHYIPEEEAIALGIAN 186

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +  ++  +     RG++Y PL+ L      +E    G   DR    ++   E    Y  
Sbjct: 187 QLTNILRDVGEDAQRGRIYLPLEDLERFNYSQEDLFKGVIDDRWRELMRFQIERARHYYR 246

Query: 238 KAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           ++   + ++  D   P +  + + + +L   + + + +           +  Y+  + ++
Sbjct: 247 ESERGICHLCRDSRWPVWSALMLYQGILDVIEANNYDVFKKRAFVPTAKKMLYLPVAWLR 306


>gi|300868673|ref|ZP_07113284.1| phytoene synthase [Oscillatoria sp. PCC 6506]
 gi|300333234|emb|CBN58476.1| phytoene synthase [Oscillatoria sp. PCC 6506]
          Length = 309

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 101/300 (33%), Gaps = 16/300 (5%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           +             +         YL   L P   R ++  +Y +      + D      
Sbjct: 11  RTLASVEDSYELCRQITEKYSKTFYLGTQLMPEAKRRAIWAIYVWCRRTDELVDGPGASE 70

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
           T    L  W+   ES         +    V  +  + ++    Q F DMI     D Y  
Sbjct: 71  TTPETLDHWEAHLESLFA---GHCLDDLDVAFVDTISRFPQDIQPFRDMIAGQRMDLYRS 127

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMIL---DSERYSASLRVIK---------YAGIAQFI 179
                ++ E Y +R++  +  ++T ++    ++  ++                 GIA  +
Sbjct: 128 RYATFEELELYCYRVAGTVGLMSTAVMGVEKTKSAASWNWHWDARSPSEEAIALGIANQL 187

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
             ++  +     RG++Y PL+ L       E   +G   +R    ++       K+   A
Sbjct: 188 TNILRDVGEDARRGRIYIPLEELALFNYTEEDLFNGVVDERWRELMRFQIGRARKFYASA 247

Query: 240 REEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              ++ + PD+  P +  + +   +L   + + + +       ++  +   +  + ++ +
Sbjct: 248 ERGIKVLSPDIRWPVWAAMMLYSQILDAIERNNYDVFQKRAFVSKPRKMLCLPLAFLRSK 307


>gi|171059230|ref|YP_001791579.1| squalene synthase HpnD [Leptothrix cholodnii SP-6]
 gi|170776675|gb|ACB34814.1| squalene synthase HpnD [Leptothrix cholodnii SP-6]
          Length = 278

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 108/279 (38%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +V           Y A L  PP  R +++  Y F  E+  V D   +P     +L WW
Sbjct: 4   QNYVQEKAAGSGSSFYYAFLFLPPPRRAAITAFYAFCREIDDVVDEVSDPGVAATKLAWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +     +          P    L+  V  YD+  ++ L +I+    D       D    +
Sbjct: 64  RQEVARAFA---GTPQHPAMQALMPHVADYDIRAEHLLAVIDGCEMDLQQSRYLDYTGLQ 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y   ++  +  +A+ I      +A++      G+A  +  +I  +     RG++Y P++
Sbjct: 121 RYCHLVAGVVGEVASGI-FGRTEAATVGYAHQLGLAFQLTNIIRDVGDDARRGRIYLPVN 179

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSI 259
            L    +  +  L+   ++R +  ++  AE   +   +A   +         P  +  +I
Sbjct: 180 ELKQFDVKAQEILNRTYNERFTALMRFQAERAHRCYDEALALLPECDRATQKPGLMMANI 239

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             ++L+  +  GF+++    +   + + W  + ++ + R
Sbjct: 240 YRTLLREIEAGGFQVLHQRISLTPVRKLWIAMQTNWRGR 278


>gi|3913360|sp|O07333|CRTY_SPIPL RecName: Full=Phytoene synthase
 gi|2189955|dbj|BAA20384.1| phytoene synthase [Arthrospira platensis]
 gi|291566693|dbj|BAI88965.1| phytoene synthase [Arthrospira platensis NIES-39]
          Length = 309

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 103/294 (35%), Gaps = 16/294 (5%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           S       +         YL   L P   R ++  +Y +      + D      T    L
Sbjct: 17  SDSYELCRQITAQYAKTFYLGTQLMPLAKRQAIWAIYVWCRRTDELVDGPMASSTTLETL 76

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             W++  ES         I P  V L+  + ++ L  Q F DMI     D   +      
Sbjct: 77  DHWEEQLESIFA---GHPIEPVDVALVDTLGRFPLDIQPFRDMIAGQRMDLSRNRYNTFD 133

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLICQ 185
           +   Y +R++  +  ++  ++ +     S+   +              GIA  +  ++  
Sbjct: 134 ELNLYCYRVAGTVGLMSLAVMGTAEPDLSVPWNRDQSIYYPKEEAIALGIANQLTNILRD 193

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           +     RG++Y PLD L          L+G+  +R    ++   +   K+   A E +  
Sbjct: 194 VGEDARRGRIYLPLDDLALFNYTEADLLNGKVDERWRELMRFQIQRARKFYTLAEEGIAA 253

Query: 246 ILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           + PD+  P +  + +   +L   + + + + +         +   +  + ++ R
Sbjct: 254 LHPDIRWPVWTALMLYRQILDEIERNEYDVFNQRAYVPTWKKMMCLPLAQLRAR 307


>gi|255584492|ref|XP_002532975.1| Phytoene synthase, chloroplast precursor, putative [Ricinus
           communis]
 gi|223527253|gb|EEF29412.1| Phytoene synthase, chloroplast precursor, putative [Ricinus
           communis]
          Length = 428

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 95/287 (33%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 131 LLSDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPT 190

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E   +             L   V ++ +  Q F DMIE    D       +
Sbjct: 191 ALDRWEARLEDLFQ---GRPFDMLDAALADTVAKFPVDIQPFKDMIEGMRLDLKKSRYKN 247

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        GIA  +  ++  +    
Sbjct: 248 FDELYLYCYYVAGTVGLMSVPVMGIAPESQAATESVYNAALALGIANQLTNILRDVGEDA 307

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  +   +G+ +D+    +K   +    +  +A + +  +  + 
Sbjct: 308 RRGRVYLPQDELAQAGLSDDDIFAGRVTDKWRNFMKNQIKRARMFFNEAEKGVTELSAES 367

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +      +  +  ++  +  +
Sbjct: 368 RWPVWASLLLYRQILDEIEANDYNNFTRRAYVGKAKKLAFLPMAYAR 414


>gi|11990226|emb|CAC19567.1| phytoene synthase [Helianthus annuus]
          Length = 414

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + +           +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 118 LLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPK 177

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DMI+    D       +
Sbjct: 178 ALDRWESRLEDLFN---GRPFDMLGAALSDTVSKFPVDVQPFKDMIDGMRMDLRKSRYEN 234

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+      +    +        GIA  +  ++  +    
Sbjct: 235 FDELYLYCYYVAGTVGLMSVPIMGIAPESNAPTESVYNAALALGIANQLTNILRDVGEDA 294

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   + + +D+    +K        +  +A E +  +    
Sbjct: 295 RRGRVYLPQDELAQAGLSDEDIFAMEVTDKWRSFMKKQIHRARTFFDQAEEGVTQLSSAS 354

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 355 RWPVWASLLLYRQILDEIEANDYNHFTKRAYVSKPKKIVALPVAYAK 401


>gi|239815487|ref|YP_002944397.1| squalene synthase HpnD [Variovorax paradoxus S110]
 gi|239802064|gb|ACS19131.1| squalene synthase HpnD [Variovorax paradoxus S110]
          Length = 279

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 92/278 (33%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V           Y A L  P   R +++  Y F  E+  V D   +P     +L WW+
Sbjct: 5   QYVQDKAAASGSSFYYAFLFLPKPRRAAITAFYAFCREIDDVVDEVSDPGVAATKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                S          P    L+     Y +      ++I+    D       D      
Sbjct: 65  TEVAQSFA---GPPRHPVMQALVPHAATYGIEPAQLNEVIDGCQMDLEQTRYLDFPGLAR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I        +       G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCHLVAGVVGEVAARIFGQTDPQTTA-YAHKLGLALQLTNIIRDVGEDALRGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +     L+  +S+R    +K  AE       +A   +         P  +  SI 
Sbjct: 181 LQKFDVKAHEILNRVHSERFVALMKFQAERAHAAYDEALALLPAPDRRAQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+  +   F++++   +   + + W         R
Sbjct: 241 RTLLREIERDNFQVLNQRVSLTPVRKFWLAWKVQALGR 278


>gi|166364033|ref|YP_001656306.1| phytoene synthase [Microcystis aeruginosa NIES-843]
 gi|166086406|dbj|BAG01114.1| phytoene synthase [Microcystis aeruginosa NIES-843]
          Length = 310

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 108/303 (35%), Gaps = 16/303 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
             +  K     +       R         YL  LL P   R ++  +Y +      + D 
Sbjct: 7   PTHPTKPLVSLAESYELCRRITEKYSKTFYLGTLLMPKAKRQAIWAIYVWCRRTDELVDG 66

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
            +  +T    L  W+   E+   G+  E      V L+  + ++ +  Q F DMI     
Sbjct: 67  PQARLTTPETLDLWEKQLETVFSGVAIEDAD---VALVDTLEKFPMDIQPFRDMIAGQQM 123

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAG 174
           D Y        + + Y +R++  +  +++ +L  E    S    +              G
Sbjct: 124 DLYRSRYQTFDELKLYCYRVAGTVGLMSSAVLGLEDGDRSAPWRRNQSVYIPQEEAIDLG 183

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           IA  +  ++  +    HRG++Y PL+ L       +  L G N  R    ++   E    
Sbjct: 184 IANQLTNILRDVGEDVHRGRIYLPLEDLERFNYSEDDLLKGVNDHRWQALMRFQIERARY 243

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           Y   A   +R + PD   P +  + + + +L   + + + + +         +  Y+  +
Sbjct: 244 YYDSAERGIRALNPDSRWPVWAALLLYQGILDVIEANNYDVFARRAFVPLPKKMLYLPVA 303

Query: 294 SIK 296
            ++
Sbjct: 304 WLR 306


>gi|40557193|gb|AAR87868.1| phytoene synthase [Oncidium Gower Ramsey]
          Length = 412

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + +       +   +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 114 LLNEAYDRCGQICAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPS 173

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V  + +  Q F DMIE    D       +
Sbjct: 174 ALDRWEARLEDLFA---GRPFDMLDAALSDTVVNFPVDIQPFKDMIEGMRLDLKKSRYKN 230

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        GIA  +  ++  +    
Sbjct: 231 FDELYLYCYYVAGTVGLMSVPVMGIAPESDATTESVYNAALALGIANQLTNILRDVGEDA 290

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +DR    +K   +    +  +A + +  +    
Sbjct: 291 TRGRVYLPQDELAEAGLSDEDIFNGKVTDRWRNFMKNQIKRARTFFQEAEKGISELNQAS 350

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 351 RWPVLASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLMAVPVAYGR 397


>gi|282898444|ref|ZP_06306434.1| Squalene/phytoene synthase [Raphidiopsis brookii D9]
 gi|281196610|gb|EFA71516.1| Squalene/phytoene synthase [Raphidiopsis brookii D9]
          Length = 310

 Score =  221 bits (563), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 101/293 (34%), Gaps = 16/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YL  LL  P  R S+  +Y +      + D      T    
Sbjct: 17  VHESYKLCQELTAKYAKTFYLGTLLMSPTKRQSVWSIYAWCRRTDELVDGPTATKTTPET 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W++  +S   G   +      V L+  ++ + L  Q F DMI     D Y       
Sbjct: 77  LAQWENQLDSIFAGCPLDDYD---VALVDTLQHFPLDIQPFRDMIAGQRMDLYRSRYETF 133

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLIC 184
                Y +R++  +  ++T I+  +    S    +              GIA  +  ++ 
Sbjct: 134 DDLYLYCYRVAGTVGLMSTTIMGVDTSVYSAPWYRDIQPYFPVEEAIALGIANQLTNILR 193

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL+ L       E  L G   DR    ++   +   ++  KA   + 
Sbjct: 194 DVGEDARRGRIYIPLEDLKKFSYSPEELLQGVLDDRWRSLMRFQIKRAREFYTKADRGIS 253

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           Y+  D   P +    +   +L   + + +++ S     +QL +   +  + ++
Sbjct: 254 YLAQDARWPVWAASMLYGKILDVIERNDYQVFSQRAYVSQLQKISTLPLAWMR 306


>gi|62526623|gb|AAX84686.1| phytoene synthase [Oncidium Gower Ramsey]
 gi|227343606|gb|ACP27623.1| phytoene synthase [Oncidium Gower Ramsey]
          Length = 412

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 93/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + +       +   +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 114 LLNEAYDRCGQICEEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPS 173

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V  + +  Q F DMIE    D       +
Sbjct: 174 ALDRWEARLEDLFA---GRPYDMLDASLSDTVVNFPVDIQPFKDMIEGMRMDLKKSRYKN 230

Query: 136 CKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++  +        +        GIA  +  ++  +    
Sbjct: 231 FDELYLYCYYVAGTVGLMSVPVMGIDPESDATTESVYNAALSLGIANQLTNILRDVGEDT 290

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +DR    +K   +    +  +A + +  +    
Sbjct: 291 RRGRVYLPQDELAEAGLSDEDIFNGKVTDRWRNFMKNQIKRARTFFQEAEKGIAELNQAS 350

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 351 RWPVLASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLMAVPVAYGR 397


>gi|194462457|gb|ACF72684.1| phytoene synthase 1 [Triticum aestivum]
          Length = 431

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 136 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 195

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 196 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 252

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 253 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 312

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 313 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 372

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 373 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 418


>gi|40456029|gb|AAR86104.1| phytoene synthase [Momordica charantia var. abbreviata]
          Length = 412

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 92/288 (31%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  +L  P  + ++  +Y +      + D         
Sbjct: 122 SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITP 181

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 182 TALDRWEARLEELFQ---GRPFDMLDAALADTVTKFPVEIQPFKDMIEGMRTDLRKSRYK 238

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 239 NFDELYLYCYYVAGTVGLMSVPVMGIAPDSEASTESVYNAALALGIANQLTNILRDVGED 298

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   G+  E    G+ +D+    +K   +    +   A + +  +   
Sbjct: 299 ARRGRIYLPQDELAQAGISEEDIFGGRVTDKWRNFMKNQIKRARMFFDDAEKGVLELNKA 358

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 359 SRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKLMALPMAYAR 406


>gi|297738160|emb|CBI27361.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 94/290 (32%), Gaps = 9/290 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            + + S           +     YL  +L  P  R ++  +Y +      + D       
Sbjct: 119 TQSLLSEAYDRCGEVCAEYAKTFYLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASHI 178

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L  W+   E   +             L   V ++ +  Q F DMIE    D     
Sbjct: 179 TPTALDRWESRLEDLFQ---GRPFDMLDAALSDTVAKFPVDIQPFKDMIEGMRMDLRKSR 235

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLP 187
             +  +   Y + ++  +  ++  ++           +  +     GIA  +  ++  + 
Sbjct: 236 YRNFDELYLYCYYVAGTVGLMSVPVMGIAPESQATTESVYKAALALGIANQLTNILRDVG 295

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               RG++Y P D L   GL  E    G+ +D+    +K   +    +  +A + +  + 
Sbjct: 296 EDARRGRIYLPQDELAQAGLSDEDIFMGRVTDKWRSFMKDQIKRARMFFDEAEKGITELS 355

Query: 248 PDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                P +    +   +L   + + +   +     ++  +   +  +  +
Sbjct: 356 SASRWPVWASFLLYRQILDEIEANDYNNFTRRAYVSKAKKIVALPLAYAR 405


>gi|12584564|emb|CAC27383.1| phytoene synthase [Helianthus annuus]
          Length = 414

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + +           +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 118 LLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPK 177

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DMI+    D       +
Sbjct: 178 ALDRWESRLEDLFN---GRPFDMLGAALSDTVSKFPVDIQPFKDMIDGMRMDLRKSRYEN 234

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+      +    +        GIA  +  ++  +    
Sbjct: 235 FDELYLYCYYVAGTVGLMSVPIMGIAPESNAPTESVYNAALALGIANQLTNILRDVGEDA 294

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   + + +D+    +K        +  +A E +  +    
Sbjct: 295 RRGRVYLPQDELAQAGLSDEDIFAMKVTDKWRFFMKKQIHRARTFFDQAEEGVTQLSSAS 354

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 355 RWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKPKKIVALPVAYAK 401


>gi|87299441|dbj|BAE79553.1| phytoene synthase [Chrysanthemum x morifolium]
          Length = 324

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 94/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 24  LLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWVIYVWCRRTDELVDGPNASHITPK 83

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E                 L   V ++ +  Q F DMIE    +        
Sbjct: 84  ALDRWESRLEDLFN---GRPFDMLDAALSDTVSKFPVDIQPFKDMIEGMRMNLRKSRYKT 140

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+      +    +        GIA  +  ++  +    
Sbjct: 141 FDELYLYCYYMAGTVGLMSVPIMGIAPDSNASTESVYNAALALGIANQLTNILRDVGEDA 200

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K   +    +  +A+E +  +    
Sbjct: 201 RRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKRQIKRARAFFDEAQEGVTQLSSAS 260

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + +   +L   + + +   +     +   +   +  +  K
Sbjct: 261 RWPVWASLLLYRQILDEIEANDYNNFTRRAYVSTPKKLVSLPLAYAK 307


>gi|329350520|gb|AEB91323.1| phytoene synthase [Clivia miniata]
          Length = 423

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 93/285 (32%), Gaps = 9/285 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 124 LLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPS 183

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E             F   L   V ++ +  Q  +DM+E    D       +
Sbjct: 184 ALDRWEARLEDLFD---GRPYDMFDAALSDTVSRFPVDIQACMDMVEGMRMDLKKSRYKN 240

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        GIA  +  ++  +    
Sbjct: 241 FDELYLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDA 300

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +GQ +D+    +K   +    +  +A + +  +    
Sbjct: 301 RRGRIYLPQDELAEAGLSDEDVFTGQVTDKWRSFMKRQIKRARMFFEQAEKGVTELSQAS 360

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             P +  + +   +L   + + +   +     +++ R   +  + 
Sbjct: 361 RWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAY 405


>gi|217970560|ref|YP_002355794.1| squalene synthase HpnD [Thauera sp. MZ1T]
 gi|217507887|gb|ACK54898.1| squalene synthase HpnD [Thauera sp. MZ1T]
          Length = 277

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 106/276 (38%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + +  P   R +++ LY F  E+  V D   +      +L+WW+
Sbjct: 5   DYCQDKAAKSGSSFYYSFMFLPAERRQAITALYAFCREVDDVVDECHDLSLAQTKLEWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                  +        P    L  +++ + LP +  L++I+    D       D K  + 
Sbjct: 65  QEV---GRIYGGLPTHPVGHALKDVLKGFRLPQEQLLEIIDGMAMDLSQTRYLDFKGLQL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++S +  LA  I   +     L+     G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCYRVASVVGLLAAEIFGYQDRQT-LKYAHDLGLAFQLTNIIRDVGEDARRGRIYLPIED 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +  +  L  + SD     +   AE   K+  +A  ++  I      P  +  +I 
Sbjct: 181 LQRFNVPAKDLLEARYSDAFRELMAFQAERAEKFYDQAFAQLPAIDRKAQRPGLVMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            ++L+     GF ++    +   L + W   ++  +
Sbjct: 241 RTLLREIARDGFLVLDRRTSLTPLRKVWLAGTTWFR 276


>gi|209527742|ref|ZP_03276237.1| Squalene/phytoene synthase [Arthrospira maxima CS-328]
 gi|209491820|gb|EDZ92180.1| Squalene/phytoene synthase [Arthrospira maxima CS-328]
          Length = 309

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 100/294 (34%), Gaps = 16/294 (5%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           S       +         YL   L P   R ++  +Y +      + D      T    L
Sbjct: 17  SDSYELCRQITAQYAKTFYLGTQLMPQAKRQAIWAIYVWCRRTDELVDGPMASSTTLETL 76

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             W++  E          I P  V L+  + ++ L  Q F DMI     D   +      
Sbjct: 77  DRWEEQLELIFA---GHPIDPVDVALVDTLGRFSLDIQPFRDMIAGQRMDLSRNRYNTFD 133

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLICQ 185
               Y +R++  +  ++  ++ + +   S+   +              GIA  +  ++  
Sbjct: 134 DLNLYCYRVAGTVGLMSLAVMGTAQPDLSVPWNRDQSIYYPKEEAIALGIANQLTNILRD 193

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           +     RG++Y PLD L           +G   +R    ++   +   K+   A E +  
Sbjct: 194 VGEDARRGRIYLPLDDLALFNYTEADLFNGIVDERWRELMRFQIQRARKFYTLAEEGIAA 253

Query: 246 ILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           + PD+  P +  + +   +L   + + + + +         +   +  + ++ R
Sbjct: 254 LHPDIRWPVWTALMLYRQILDEIERNEYDVFNQRAYVPTWKKMMCLPVAQLRAR 307


>gi|19347|emb|CAA47625.1| mutant phytoene synthase [Solanum lycopersicum]
          Length = 432

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 89/278 (32%), Gaps = 9/278 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +      L  +L  P  R ++  +Y +      + D          
Sbjct: 116 LLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPA 175

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++  E                 L   V  + +  Q F DMIE    D       +
Sbjct: 176 ALDRWENRLEDVFN---GRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKN 232

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 233 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 292

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K       K+  +A + +  +    
Sbjct: 293 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSAS 352

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
             P +  + +   +L   + + +   +     ++    
Sbjct: 353 RFPVWASLVLYRKILDEIEANDYNNFTKRAYVSKSNML 390


>gi|91787893|ref|YP_548845.1| farnesyl-diphosphate farnesyltransferase [Polaromonas sp. JS666]
 gi|91697118|gb|ABE43947.1| farnesyl-diphosphate farnesyltransferase [Polaromonas sp. JS666]
          Length = 280

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 99/278 (35%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V +         Y A L  PP  R +++  Y F  E+  V D   +P     +L WW+
Sbjct: 5   QYVQQKAAASGSSFYYAFLFLPPERRAAITAFYAFCREIDDVVDEVTDPGLARTKLSWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                S          P    L+ +   Y +  ++   +IE    D   +   D      
Sbjct: 65  SEVVKSYA---GSPTHPVMQALMPLAANYGIEARHLQAVIEGCQMDLEQNRYLDFPGLMQ 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I   +   A+       G+A  +  +I  +     RG++Y P++ 
Sbjct: 122 YCHLVAGIVGEVAARI-FGQTDEATTAYAHKLGLAFQLTNIIRDVGEDAMRGRIYLPINE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +     L  Q S+R +  ++   +  L    +A   +         P  +  SI 
Sbjct: 181 LQQFDVKAHEILKRQYSERFTALMQFQTQRALALYDEALALLPPADRRAQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+     G++++    +   L + W    +    R
Sbjct: 241 RTLLREIAADGYQVLHQRVSLTPLRKFWLAWKTQAFGR 278


>gi|170078541|ref|YP_001735179.1| phytoene synthase [Synechococcus sp. PCC 7002]
 gi|169886210|gb|ACA99923.1| Phytoene synthase [Synechococcus sp. PCC 7002]
          Length = 313

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 100/292 (34%), Gaps = 16/292 (5%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                +            YL  LL P   R ++  +Y +      + D      T    L
Sbjct: 21  EEAYEYCRTVTAMYSKTFYLGTLLMPKEKREAIWAIYVWCRRTDELVDGPEAVNTTPETL 80

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             W+   ES   G          V L+  + ++ L  Q F DMI     D Y       +
Sbjct: 81  DQWERDLESVFAGQPVADPD---VALVDSLNRFPLDIQPFRDMIAGQRMDLYRSRYETFE 137

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLICQ 185
             E Y +R++  +  ++  ++  E  + +    +              GIA  +  ++  
Sbjct: 138 DLELYCYRVAGTVGLMSGAVMGLENRTNTAPWNRQSQSQMPTEEAIALGIANQLTNILRD 197

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           +     RG++Y PL+ L       +   +G   +R    +K   +    Y   A   +R 
Sbjct: 198 VGEDRGRGRIYLPLEDLALFNYSEKDLFAGVIDERWRSLMKFQIKRARHYYQIAERGIRS 257

Query: 246 ILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           + PD   P +  + + + +L   + + + + +         +  Y+  + ++
Sbjct: 258 LHPDARWPVWSALMLYQGILDIIEKNDYDVFNRRAYVPTAKKMVYLPVALLR 309


>gi|166343816|gb|ABY86651.1| phytoene synthase [x Citrofortunella microcarpa]
          Length = 436

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 93/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 139 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 198

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E+  +             L   V ++ +  Q F DMIE    D       
Sbjct: 199 AALDRWESRLENLFQ---GRPFDMLDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYK 255

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           D  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 256 DFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGED 315

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G+ +++    +K   +    +   A   +  +   
Sbjct: 316 AQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEA 375

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 376 SRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPIAYAK 423


>gi|251825147|gb|ACT20708.1| chloroplast phytoene synthase [Brassica rapa]
          Length = 424

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 128 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 187

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           M L  W+   E   +             L   V +Y +  Q F DMIE    D       
Sbjct: 188 MALDRWEARLEDLFR---GRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLRKSRYK 244

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +      Y + ++  +  ++  ++  +        +        GIA  +  ++  +   
Sbjct: 245 NFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 304

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K+  +    +  +A + +  +   
Sbjct: 305 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELDAA 364

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      +  +   +  +  K
Sbjct: 365 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKAKKIAALPLAYAK 412


>gi|229368569|gb|ACQ59147.1| phytoene synthase 1 [Aegilops speltoides]
          Length = 427

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 132 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 191

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 192 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 248

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 249 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 308

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 309 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 368

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 369 WPVWASLLLYRQILDEIEANDYNNFTRRAYVGKAKKVLALPVAYGR 414


>gi|262479046|gb|ACY68563.1| phytoene synthase 1 [Aegilops tauschii]
          Length = 427

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 90/297 (30%), Gaps = 9/297 (3%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           +T+                     +     YL  LL     R ++  +Y +      + D
Sbjct: 121 VTREMDAPRGGLGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVD 180

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W+   E                 L   + ++ +  Q F DMI+   
Sbjct: 181 GPNASHITPQALDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMR 237

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIG 180
            D       +  +   Y + ++  +  ++  ++           +        G+A  + 
Sbjct: 238 TDLKKARYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLT 297

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  +     RG++Y P D L   GL  E    G  +D+    +K   +    +  +A 
Sbjct: 298 NILRDVGEDARRGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAE 357

Query: 241 EEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +  +  +   P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 358 RGVTELRKESRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 414


>gi|124295134|gb|ABN04109.1| phytoene synthase 3 [Gentiana lutea]
          Length = 425

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     Y    L  P  R+++  +Y +      + D         
Sbjct: 132 NVLNEAYDRCREVCAEYAKSFYWGTQLMTPERRLAIWAIYVWCRRTDELVDGPNASHINP 191

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   K    +        L   + +Y +  Q F DMIE    D       
Sbjct: 192 TALDRWEARLEDVFK---GQPFDMLDAALSDTITKYPVDIQPFRDMIEGMRMDLKKSRYK 248

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 249 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALSLGIANQLTNILRDVGED 308

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+   A + +  +   
Sbjct: 309 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIKRARKFYDDAEKGVPELSSA 368

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  +     +L   + + +   +     N+  +   M  +  K
Sbjct: 369 SRLPVWAALLFYRKILDEIEANDYNNFTKRAYVNKAKKLLAMPVACAK 416


>gi|115499512|gb|ABI98829.1| phytoene synthase [Narcissus tazetta]
          Length = 423

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 93/285 (32%), Gaps = 9/285 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 125 LLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPS 184

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E             F   L   V ++ +  Q F+DM+E    D       +
Sbjct: 185 ALDRWEARLEDLFD---GRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKN 241

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        GIA  +  ++  +    
Sbjct: 242 FDELYLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDA 301

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   G   E   +GQ +D+    +K   +    +  +A + +  +    
Sbjct: 302 RRGRIYLPQDELAEAGFSDEDVFTGQVTDKWRSFMKRQIKRARMFFEQAEKGVTELSQAS 361

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             P +  + +   +L   + + +   +     +++ R   +  + 
Sbjct: 362 RWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAY 406


>gi|253999129|ref|YP_003051192.1| squalene synthase HpnD [Methylovorus sp. SIP3-4]
 gi|253985808|gb|ACT50665.1| squalene synthase HpnD [Methylovorus sp. SIP3-4]
          Length = 278

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 101/279 (36%), Gaps = 6/279 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +            Y +    P   R +++ LY F  E+  + D   +      +L WW
Sbjct: 4   QEYCENKAAASGSSFYASFRFLPKPQRDAITALYAFCREVDDIADECTDIGIARTKLAWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           ++               P S  L   +  Y L  Q+F+++I     D   +   +    E
Sbjct: 64  REEIHGLYA---GNPQHPVSKALQGPISTYRLQEQHFIEIIAGMEMDCEQNRYANFAALE 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y +R++S +  L+  I       A+ +     G+A  +  +I  +     R ++Y P D
Sbjct: 121 LYCYRVASVVGLLSAAIFGYRN-PATEQYALDLGMAFQLTNIIRDVGEDARRDRIYLPQD 179

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSI 259
            L   G+     L G  + ++   +        +Y  KA  E+            +  +I
Sbjct: 180 ELAQFGVTEIDILHGHETPKVRELLDFQIARAERYYDKALGELPQEDRKTQRTGLMMSAI 239

Query: 260 TESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L+  +  G + +++   +   L + W   S+ ++ 
Sbjct: 240 YRTLLREIKADGAEKVLNSRTSLGGLRKMWLAFSTWLRN 278


>gi|1709885|sp|P53797|PSY_NARPS RecName: Full=Phytoene synthase, chloroplastic; Flags: Precursor
 gi|780275|emb|CAA55391.1| phytoene synthase [Narcissus pseudonarcissus]
          Length = 423

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 94/285 (32%), Gaps = 9/285 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL  LL  P  R ++  +Y +      + D          
Sbjct: 124 LLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPS 183

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E             F   L   V ++ +  Q F+DM+E    D       +
Sbjct: 184 ALDRWEARLEDLFA---GRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKN 240

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  ++           +        GIA  +  ++  +    
Sbjct: 241 FDELYLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGEDA 300

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A + +  +    
Sbjct: 301 RRGRIYLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTELSQAS 360

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             P +  + +   +L   + + +   +     +++ R   +  + 
Sbjct: 361 RWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAY 405


>gi|59665087|gb|AAW88383.1| phytoene synthase [Lycium barbarum]
 gi|62530403|gb|AAX85428.1| PSY [Mespilus germanica]
          Length = 425

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     Y    L  P  R+++  +Y +      + D         
Sbjct: 132 NVLNEAYDRCREVCAEYAKSFYWGTQLMTPERRLAIWAIYVWCRRTDELVDGPNASHINP 191

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   K    +        L   + +Y +  Q F DMIE    D       
Sbjct: 192 TALDRWEARLEDVFK---GQPFDMLDAALSDTITKYPVDIQPFRDMIEGMRMDLKKSRYK 248

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 249 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALSLGIANQLTNILRDVGED 308

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+   A + +  +   
Sbjct: 309 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIKRARKFYDDAEKGVPELSSA 368

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  +     +L   + + +   +     N+  +   M  +  K
Sbjct: 369 SRLPVWAALLFYRKILDEIEANDYNNFTKRAYVNKAKKLLAMPVACAK 416


>gi|313201230|ref|YP_004039888.1| squalene synthase hpnd [Methylovorus sp. MP688]
 gi|312440546|gb|ADQ84652.1| squalene synthase HpnD [Methylovorus sp. MP688]
          Length = 278

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 101/279 (36%), Gaps = 6/279 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +            Y +    P   R +++ LY F  E+  + D   +      +L WW
Sbjct: 4   QEYCENKAAASGSSFYASFRFLPKPQRDAITALYAFCREVDDIADECTDIGIARTKLAWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           ++               P S  L   +  Y L  Q+F+++I     D   +   +    E
Sbjct: 64  REEIHGLYA---GNPQHPVSKALQGPISTYRLQEQHFIEIIAGMEMDCEQNRYANFAALE 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y +R++S +  L+  I       A+ +     G+A  +  +I  +     R ++Y P D
Sbjct: 121 LYCYRVASVVGLLSAAIFGYRN-PATEQYALDLGMAFQLTNIIRDVGEDARRDRIYLPQD 179

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSI 259
            L   G+     L G  + ++   +        +Y  KA  E+            +  +I
Sbjct: 180 ELAQFGVSEIDILHGHETPKVRELLDFQIARAERYYDKALGELPQEDRKTQRTGLMMSAI 239

Query: 260 TESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L+  +  G + +++   +   L + W   S+ ++ 
Sbjct: 240 YRTLLREIKADGAEKVLNSRTSLGGLRKMWLAFSTWLRN 278


>gi|124295132|gb|ABN04108.1| phytoene synthase 2 [Gentiana lutea]
          Length = 424

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     Y    L  P  R+++  +Y +      + D         
Sbjct: 132 NVLNEAYDRCREVCAEYAKSFYWGTQLMTPERRLAIWAIYVWCRRTDELVDGPNASHINP 191

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   K    +        L   + +Y +  Q F DMIE    D       
Sbjct: 192 TALDRWEARLEDVFK---GQPFDMLDAALSDTITKYPVDIQPFRDMIEGMRMDLKKSRYK 248

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 249 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALSLGIANQLTNILRDVGED 308

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+   A + +  +   
Sbjct: 309 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIKRARKFYDDAEKGVPELSSA 368

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  +     +L   + + +   +     N+  +   M  +  K
Sbjct: 369 SRLPVWAALLFYRKILDEIEANDYNNFTKRAYVNKAKKLLAMPVACAK 416


>gi|229368529|gb|ACQ59127.1| phytoene synthase 1 [Triticum urartu]
 gi|229368531|gb|ACQ59128.1| phytoene synthase 1 [Triticum urartu]
          Length = 428

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 133 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 192

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 193 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 249

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 250 DELYMYCYYVAGTVGLMSVPVMGIAPDSKATAESVYGAALALGLANQLTNILRDVGEDAR 309

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 310 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 369

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 370 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 415


>gi|158726407|gb|ABW80611.1| phytoene synthase B1 [Triticum turgidum subsp. durum]
 gi|194462459|gb|ACF72685.1| phytoene synthase 1 [Triticum turgidum subsp. durum]
 gi|229368557|gb|ACQ59141.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccoides]
          Length = 421

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 86/284 (30%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 126 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 185

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 186 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 242

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 243 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 302

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 303 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 362

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 363 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAY 406


>gi|289208686|ref|YP_003460752.1| squalene synthase HpnD [Thioalkalivibrio sp. K90mix]
 gi|288944317|gb|ADC72016.1| squalene synthase HpnD [Thioalkalivibrio sp. K90mix]
          Length = 285

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 59/276 (21%), Positives = 104/276 (37%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y A     P  R +++ LY F  E+  + D  R       +LQWW+
Sbjct: 5   EYCEEKAAKSGSSFYYAFRFLEPDRRRAITALYAFCREVDDIVDEVREESVARTKLQWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +  E            P +  L   +  +DL  +YF ++I+    D   DS  D      
Sbjct: 65  EEIERLFDHQ---PRHPITQALQPHLAPFDLSREYFDEIIDGMQMDLDYDSYPDFTTLSL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R +S +  L+  I         L+     G+A  +  ++  +     RG++Y PLD 
Sbjct: 122 YCYRAASVVGILSAHIFGFSDRRT-LKYAHDLGMALQLTNILRDVHEDAMRGRVYIPLDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSIT 260
           L   G+  E F      DR        AE   +Y  +A E +         P  I  +I 
Sbjct: 181 LKKHGVKPEEFQVNVTDDRHRALFAEQAERARRYYQRAEEHLPAEDRYPQRPGLIMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            ++L   Q+ G++++ H      + + W    ++ +
Sbjct: 241 RTLLDEIQDDGYRVLEHRVRLTPIRKLWIAWRTARR 276


>gi|110348215|gb|ABG72805.1| phytoene synthase protein [Carica papaya]
          Length = 438

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 94/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 137 SLMTEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWWRRTEELVDGPNASHITP 196

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F+DMIE    D       
Sbjct: 197 TALDRWEARLEDLFQ---GRPFDMLDAALSDTVAKFPVDIQPFIDMIEGMRMDLRKSRYK 253

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  I+           +        GIA  +  ++  +   
Sbjct: 254 NFDELYLYCYYVAGTVGLMSVPIMGIAPESQATTESVYNAALALGIANQLTNILRDVGED 313

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G  +D+    +K   +    +  +A + +  +   
Sbjct: 314 ARRGRIYLPQDELAQAGLSDDDIFAGTVTDKWRNFMKKQIKRARMFFDEAEKGVTELSAA 373

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  S  +
Sbjct: 374 SRWPVWASLLLYRKILDEIEANDYNNFTKRAYVSKAKKILALPISYAR 421


>gi|229368571|gb|ACQ59148.1| phytoene synthase 1 [Aegilops speltoides]
          Length = 429

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 134 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 193

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 194 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 250

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 251 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 310

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 311 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 370

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 371 WPVWASLLLYRQILDEIEANDYNNFTRRAYVGKAKKVLALPVAYGR 416


>gi|158726401|gb|ABW80608.1| phytoene synthase A1 [Triticum turgidum subsp. durum]
 gi|166239747|gb|ABY86430.1| phytoene synthase 1 [Triticum turgidum subsp. durum]
 gi|194462449|gb|ACF72680.1| phytoene synthase 1 [Triticum aestivum]
 gi|229368527|gb|ACQ59126.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccon]
 gi|229368545|gb|ACQ59135.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccoides]
          Length = 428

 Score =  219 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 86/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 133 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 192

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 193 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 249

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++                    G+A  +  ++  +     
Sbjct: 250 DELYMYCYYVAGTVGLMSVPVMGIAPDSKATAETVYGAALALGLANQLTNILRDVGEDAR 309

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 310 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 369

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 370 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 415


>gi|229368533|gb|ACQ59129.1| phytoene synthase 1 [Triticum monococcum subsp. aegilopoides]
 gi|229368535|gb|ACQ59130.1| phytoene synthase 1 [Triticum monococcum]
 gi|229368537|gb|ACQ59131.1| phytoene synthase 1 [Triticum monococcum]
          Length = 428

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 133 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 192

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 193 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 249

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 250 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 309

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 310 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 369

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 370 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 415


>gi|194307643|gb|ACF42352.1| phytoene synthase 7A [Triticum aestivum]
 gi|194307649|gb|ACF42355.1| phytoene synthase 7A [Triticum aestivum]
 gi|194307651|gb|ACF42356.1| phytoene synthase 7A [Triticum aestivum]
 gi|194307653|gb|ACF42357.1| phytoene synthase 7A [Triticum aestivum]
          Length = 431

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 136 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 195

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 196 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 252

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 253 DELYMYCYYVAGTVGLMSVPVMGIAPDSKATAESVYGAALALGLANQLTNILRDVGEDAR 312

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 313 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 372

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 373 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 418


>gi|154550143|gb|ABS83385.1| phytoene synthase 1 [Triticum aestivum]
 gi|154550145|gb|ABS83386.1| phytoene synthase 1 [Triticum aestivum]
 gi|158726403|gb|ABW80609.1| phytoene synthase A1 [Triticum aestivum]
 gi|166239749|gb|ABY86431.1| phytoene synthase 1 [Triticum turgidum subsp. durum]
 gi|229368541|gb|ACQ59133.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccoides]
 gi|229368543|gb|ACQ59134.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccon]
 gi|229368547|gb|ACQ59136.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccon]
 gi|229368549|gb|ACQ59137.1| phytoene synthase 1 [Triticum aestivum subsp. spelta]
 gi|229368551|gb|ACQ59138.1| phytoene synthase 1 [Triticum aestivum subsp. spelta]
          Length = 428

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 133 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 192

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 193 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 249

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 250 DELYMYCYYVAGTVGLMSVPVMGIAPDSKATAESVYGAALALGLANQLTNILRDVGEDAR 309

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 310 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 369

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 370 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 415


>gi|113477442|ref|YP_723503.1| phytoene synthase [Trichodesmium erythraeum IMS101]
 gi|110168490|gb|ABG53030.1| phytoene synthase [Trichodesmium erythraeum IMS101]
          Length = 325

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 102/295 (34%), Gaps = 16/295 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    +         Y+   L P     ++  +Y +      + D   +  T    
Sbjct: 32  IEDSYELCRQITATYSKTFYMGTQLMPEAKSKAIWAIYVWCRRTDELVDGPTSNTTTTET 91

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQ W+   ES   G   E      V L+  + ++ +  Q F DMI     D Y+      
Sbjct: 92  LQKWEQNLESIFAGYPLEDAD---VALVDTLSRFPIDIQPFRDMIAGQQMDLYSSRYQTF 148

Query: 137 KQFEHYAFRISSRLIHLATMIL------------DSERYSASLRVIKYAGIAQFIGQLIC 184
           ++ + Y +R++  +  +   ++              +++          GIA  +  ++ 
Sbjct: 149 EELKLYCYRVAGTVGLMTMPVMGIETSNVAAPQKSHQQFQYPASEAIALGIANQLTNILR 208

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL  L       E  L+G   +R    +K       K+   A   ++
Sbjct: 209 DVGEDARRGRIYLPLQELALFDYTEEDLLNGVIDERWRELMKFQIHRARKFFVDAERGIK 268

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            + PD+  P +    +   +L   +++ + + +     +   +   +  + ++ +
Sbjct: 269 RLSPDIRWPVWSASMLYSKILDAIEHNQYDVFNRRAYVSTPRKFLCLPIAFLRSK 323


>gi|6959860|gb|AAF33237.1|AF220218_1 phytoene synthase [Citrus unshiu]
 gi|11344507|dbj|BAB18514.1| phytoene synthase [Citrus unshiu]
 gi|82394887|gb|ABB72444.1| phytoene synthase [Citrus sinensis]
          Length = 436

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 90/288 (31%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL     R ++  +Y +      + D         
Sbjct: 139 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTSERRRAIWAIYVWCRRTDELVDGPNASHITP 198

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 199 TALDRWESRLEDLFR---GRPFDMLDAALSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYK 255

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 256 NFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGED 315

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G+ + +    +K   +    +   A   +  +   
Sbjct: 316 ARRGRVYLPQDELAQAGLSDDDIFAGEVTIKWRNFMKNQIKRARMFFDMAENGVTELSEA 375

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 376 SRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPIAYAK 423


>gi|225698185|gb|ACO07290.1| phytoene synthase 1 [Triticum turgidum subsp. durum]
 gi|229368539|gb|ACQ59132.1| phytoene synthase 1 [Triticum monococcum]
          Length = 428

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 133 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 192

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 193 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 249

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 250 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 309

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 310 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 369

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 370 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 415


>gi|186683053|ref|YP_001866249.1| squalene/phytoene synthase [Nostoc punctiforme PCC 73102]
 gi|186465505|gb|ACC81306.1| Squalene/phytoene synthase [Nostoc punctiforme PCC 73102]
          Length = 310

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 104/293 (35%), Gaps = 16/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YL  LL  P+ R S+  +Y +      + D   + IT    
Sbjct: 17  VDESYKLCRHLTAKYAKTFYLGTLLMSPVKRQSIWSIYAWCRRTDELVDGPASAITTPET 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   ES   G   E+     V L+  ++++ +  Q F DMI     D Y       
Sbjct: 77  LDLWEQQLESIFAGRPLENYD---VALVDTLQRFPMDIQPFRDMIAGQRMDLYRSRYETF 133

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFIGQLIC 184
           +    Y +R++  +  ++T ++  +    +    +              GIA  +  ++ 
Sbjct: 134 EDLYLYCYRVAGTVGLMSTEVMGVDSTLYTAPWHQNKQPYLPTEEAIALGIANQLTNILR 193

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG++Y PL+ L       + F  G   DR    ++   E   ++   + + + 
Sbjct: 194 DVGEDAKRGRIYIPLEDLEKFNYTEQDFFKGVVDDRWRALMRFQIERARQFYTTSNQGIT 253

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           Y+  D   P +    +   +L+  + + + + S      Q  +   +  + ++
Sbjct: 254 YLASDARWPVWAASMLYGQILEVIERNDYDVFSRRAFVPQWKKLRTLPLAWMR 306


>gi|194307655|gb|ACF42358.1| phytoene synthase 7A [Triticum aestivum]
          Length = 431

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 136 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 195

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 196 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 252

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 253 DELYMYCYYVAGTVGLMSVPVMGIAPDSKATAESVYGAALALGLANQLTNILRDVGEDAR 312

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  SD+    +K   +    +  +A   +  +  +  
Sbjct: 313 RGRIYLPQDELAEAGLSDEDIFKGVVSDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 372

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 373 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 418


>gi|229368559|gb|ACQ59142.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccoides]
          Length = 421

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 87/284 (30%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +          +     YL  LL     R ++  +Y +      + D           
Sbjct: 126 LGKAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 185

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 186 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 242

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 243 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 302

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 303 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 362

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 363 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAY 406


>gi|168060428|ref|XP_001782198.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666364|gb|EDQ53021.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 301

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 96/287 (33%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL   L  P  + ++  +Y +      + D          
Sbjct: 1   MLEEAYTRCGEVCAEYAKTFYLGTKLMTPERQRAIWAIYVWCRRTDELVDGPNASRITPT 60

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+D  E        +        L   V ++ +  Q F DMI+    D       +
Sbjct: 61  ALDRWEDRLEDIFC---GQPYDMLDAALADTVSKFPVDIQPFRDMIDGMRMDLVKSRYAN 117

Query: 136 CKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+  +        +        GIA  +  ++  +    
Sbjct: 118 FDELYLYCYNVAGTVGLMSVPIMGIDPESKATTQSVYNGALALGIANQLTNILRDVGEDA 177

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A + +  +  D 
Sbjct: 178 RRGRVYLPQDELARFGLTDEDIFAGKVTDKWRAFMKDQIKRARMFFVEAEQSVLELDKDS 237

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P +  + + + +L   + + +   +     N+  +   +  +  +
Sbjct: 238 RWPVWSALLLYQQILDAIEANDYDNFTKRAYVNKWKKFATLPMAYGR 284


>gi|194307645|gb|ACF42353.1| phytoene synthase 7B [Triticum aestivum]
          Length = 424

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 88/284 (30%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +          +     YL  LL     R ++  +Y +      + D           
Sbjct: 129 LGKAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 188

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 189 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 245

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 246 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 305

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E  + G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 306 RGRIYLPQDELAEAGLSDEDIVKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 365

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 366 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAY 409


>gi|303275976|ref|XP_003057282.1| phytoene synthase [Micromonas pusilla CCMP1545]
 gi|226461634|gb|EEH58927.1| phytoene synthase [Micromonas pusilla CCMP1545]
          Length = 433

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 94/302 (31%), Gaps = 18/302 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R  EK+             +     YL   L  P  + ++  +Y +      + D    
Sbjct: 128 PRVPEKMLDDAYERCNEVTSEYAKTFYLGTKLMTPEKQRAIWAIYVWCRRTDELVDGPNA 187

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                  L  W+   E+                L   V ++ +  Q F DM++    D  
Sbjct: 188 SHITPEALNQWEARLEAVFD---GRPADVIDAALCDTVSRFPVDIQPFRDMVDGMRMDLV 244

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLIC 184
                   +   Y +R++  +  ++  I+  +           +     G+A  +  ++ 
Sbjct: 245 KPRYETFDELYEYCYRVAGTVGLMSMPIMGCDENFEGDLRKVYKAALSLGLANQLTNILR 304

Query: 185 QLPIH-YHRGQLYFPLDILGAVGLDRESFLS--------GQNSDRISLAIKIFAELGLKY 235
            +      R ++Y PL+ L   G++    +         G    R    +K       + 
Sbjct: 305 DVGEDVITRNRIYIPLEELRRFGIEESEVIKCSLVDAETGAVDPRWKEFMKFQIARAREV 364

Query: 236 LFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             +A   +  +  D   P +  + +  ++L   + + +   +      +L +   + ++ 
Sbjct: 365 FAEAEAGVNCLHKDARWPVWSALDVYRNILDAIEANDYDNFTQRAYVPKLQKFLMLPAAY 424

Query: 295 IK 296
            K
Sbjct: 425 SK 426


>gi|158726409|gb|ABW80612.1| phytoene synthase B1 [Triticum aestivum]
 gi|166239751|gb|ABY86432.1| phytoene synthase 1 [Triticum turgidum subsp. durum]
 gi|194462451|gb|ACF72681.1| phytoene synthase 1 [Triticum aestivum]
 gi|194462453|gb|ACF72682.1| phytoene synthase 1 [Triticum aestivum]
 gi|229368553|gb|ACQ59139.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccoides]
 gi|229368555|gb|ACQ59140.1| phytoene synthase 1 [Triticum aestivum subsp. spelta]
 gi|229368561|gb|ACQ59143.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccoides]
 gi|229368563|gb|ACQ59144.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccon]
 gi|229368567|gb|ACQ59146.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccon]
          Length = 421

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 88/284 (30%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +          +     YL  LL     R ++  +Y +      + D           
Sbjct: 126 LGKAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 185

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 186 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 242

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 243 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 302

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E  + G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 303 RGRIYLPQDELAEAGLSDEDIVKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 362

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 363 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAY 406


>gi|297538619|ref|YP_003674388.1| squalene synthase HpnD [Methylotenera sp. 301]
 gi|297257966|gb|ADI29811.1| squalene synthase HpnD [Methylotenera sp. 301]
          Length = 278

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 109/278 (39%), Gaps = 6/278 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +            Y + +  P   R +++ LY F  E+  + D   +      +L WW
Sbjct: 4   QQYCEEKTAKSGSSFYYSFMFLPKDRREAITALYAFCREVDDIADECTDFTIAQTKLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   ES  +    +   P S  LL+ ++ Y L  ++F+++I+    D   +   D KQ +
Sbjct: 64  RTEIESLYE---GKPQHPVSKALLNPIKTYQLDTEHFIEVIDGMEMDLKFNRYEDFKQLQ 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y +R++S +  L   IL        L+     G+A  +  +I  +     R ++Y PLD
Sbjct: 121 LYCYRVASVVGLLTAQILGFSNRKT-LKYAHDLGMAFQLTNIIRDVGEDARRNRIYLPLD 179

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSI 259
            L    +  +  L  + SD +   +    E    Y  +A  E+            +  +I
Sbjct: 180 ELAQFKVTEDDILHSRESDAVKNLLDHQIERAETYYDRALRELPAEDRKNQRVGLMMAAI 239

Query: 260 TESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIK 296
             ++L+  +  G + +++   +   L +     +  IK
Sbjct: 240 YRTLLREIKVDGAQKVLNSRTSLGALRKILLAFNVWIK 277


>gi|219363741|gb|ACI62510.2| chromoplast phytoene synthase [Brassica rapa subsp. pekinensis]
          Length = 425

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 93/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 129 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 188

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           M L  W+   E   +             L   V +Y +  Q F D IE    D       
Sbjct: 189 MALDRWEARLEDLFR---GRPFDMLDAALADTVARYPVDIQPFRDTIEGMRMDLRKSRYK 245

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
           +      Y + ++  +  ++  ++  +        +        GIA  +  ++  +   
Sbjct: 246 NFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 305

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K+  +    +  +A + +  +   
Sbjct: 306 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRHFMKMQLKRARMFFDEAEKGVTELDAA 365

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      +  +   +  +  K
Sbjct: 366 SRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKAKKIAALPLAYAK 413


>gi|56752121|ref|YP_172822.1| phytoene synthase [Synechococcus elongatus PCC 6301]
 gi|81300793|ref|YP_401001.1| phytoene synthase [Synechococcus elongatus PCC 7942]
 gi|93141248|sp|P37269|CRTB_SYNE7 RecName: Full=Phytoene synthase
 gi|56687080|dbj|BAD80302.1| phytoene synthase [Synechococcus elongatus PCC 6301]
 gi|81169674|gb|ABB58014.1| phytoene synthase [Synechococcus elongatus PCC 7942]
          Length = 308

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 101/309 (32%), Gaps = 15/309 (4%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           +L+ +     +     S       +         YL  LL P   R ++  +Y +     
Sbjct: 1   MLQMIPARPSRALASLSEAYEECRQITARYAKTFYLGTLLMPEAKRQAIWAIYVWCRRTD 60

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
            + D  +   T    L  W+   E        E      V L+  + +Y L  Q F DMI
Sbjct: 61  ELVDGPQAAQTNFATLDAWERRLERLFA---GEPEDDCDVALVDTLARYPLDIQPFRDMI 117

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------- 171
           E    D   +     +    Y +R++  +  ++  ++  E  ++                
Sbjct: 118 EGQRMDLLQNRYSTFEDLYTYCYRVAGTVGLMSQPVMGIESTNSRAPWDPTTPPDPTQEA 177

Query: 172 -YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P + L       +   +G   DR    ++   +
Sbjct: 178 LALGIANQLTNILRDVGEDARRGRIYLPQEELAQFNYSEQDLFNGVIDDRWRAFMQFQLD 237

Query: 231 LGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
               Y  +A   +R +  D   P +  + +   +L   + + + +           +   
Sbjct: 238 RARDYFEQAERGIRQLSHDARWPVWASLMLYREILDVIEQNNYDVFRKRAYVPTWRKLCS 297

Query: 290 MLSSSIKKR 298
           +  + ++  
Sbjct: 298 LPVAMLRAT 306


>gi|1346882|sp|P49293|PSY_CUCME RecName: Full=Phytoene synthase, chloroplastic; AltName: Full=MEL5;
           Flags: Precursor
 gi|870985|emb|CAA85775.1| phytoene synthase [Cucumis melo]
          Length = 422

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 93/289 (32%), Gaps = 10/289 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  +L  P  + ++  +Y +      + D         
Sbjct: 131 SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITP 190

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 191 TALDRWEARLEELFQ---GRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYK 247

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFI-GQLICQLPI 188
           +  +   Y + ++  +  ++  ++           +        GIA      ++  +  
Sbjct: 248 NFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGE 307

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A + +  +  
Sbjct: 308 DARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNK 367

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               P +  + +   +L   + + +   +     ++  +   +  +  +
Sbjct: 368 ASRWPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGR 416


>gi|194307657|gb|ACF42359.1| phytoene synthase 7A [Triticum aestivum]
          Length = 425

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 88/297 (29%), Gaps = 9/297 (3%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           + +                     +     YL  LL     R ++  +Y +      + D
Sbjct: 119 VARELESPRGGLGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVD 178

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W+   E                 L   + ++ +  Q F DMI+   
Sbjct: 179 GPNASHITPQALDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMR 235

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIG 180
            D       +  +   Y + ++  +  ++  ++           +        G+A  + 
Sbjct: 236 TDLKKARYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLT 295

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  +     RG++Y P D L    L  E    G  +D+    +K   +    +  +A 
Sbjct: 296 NILRDVGEDARRGRIYLPQDELVEAELSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAE 355

Query: 241 EEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +  +  +   P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 356 RGVTELRKESRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 412


>gi|158726405|gb|ABW80610.1| phytoene synthase B1 [Triticum turgidum subsp. durum]
 gi|166239753|gb|ABY86433.1| phytoene synthase 1 [Triticum turgidum subsp. durum]
 gi|229368579|gb|ACQ59152.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccon]
          Length = 421

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 126 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 185

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 186 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYTNF 242

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 243 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 302

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 303 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 362

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 363 WPVWASLLLYRQILDEIEANDYNNFTRRAYVGKAKKVLALPVAYGR 408


>gi|255636401|gb|ACU18539.1| unknown [Glycine max]
          Length = 396

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 92/288 (31%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL   L     R ++  +Y +      + D         
Sbjct: 96  DLLSAAYDRCGEVCAEYAKTFYLGTQLMTQERRKAIWAIYVWCRRTDELVDGPNASHITP 155

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+       +         +   L   V +Y +  Q F DMIE    D       
Sbjct: 156 KALDRWEQRLYDVFE---GRPYDMYDAALSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYN 212

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 213 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTESVYNAALALGIANQLTNILRDVGED 272

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +    G+ +D+    +K   +    +  +A + +  +   
Sbjct: 273 ARRGRVYLPQDELAQAGLSDDDIFRGKVTDKWRNFMKGQIQRARMFFDEAEKGVSELNSA 332

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +      ++ +   + ++  +
Sbjct: 333 SRWPVWASLLLYRQILDSIEANDYNNFTKRAYVGKVKKLLSLPAAYGR 380


>gi|319656520|gb|ADV58674.1| phytoene synthase 1 [Triticum aestivum]
          Length = 425

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 88/297 (29%), Gaps = 9/297 (3%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           + +                     +     YL  LL     R ++  +Y +      + D
Sbjct: 119 VARELESPRGGLGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVD 178

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W+   E                 L   + ++ +  Q F DMI+   
Sbjct: 179 GPNASHITPQALDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMR 235

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIG 180
            D       +  +   Y + ++  +  ++  ++           +        G+A  + 
Sbjct: 236 TDLKKARYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLT 295

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  +     RG++Y P D L    L  E    G  +D+    +K   +    +  +A 
Sbjct: 296 NILRDVGEDARRGRIYLPQDELVEAELSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAE 355

Query: 241 EEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +  +  +   P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 356 RGVTELRKESRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 412


>gi|229368573|gb|ACQ59149.1| phytoene synthase 1 [Aegilops speltoides]
          Length = 427

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 132 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 191

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 192 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 248

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 249 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 308

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 309 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 368

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 369 WPVWASLLLYRQILDEIEANDYNNFTRRAYVGKAKKVLALPVAYGR 414


>gi|166343818|gb|ABY86652.1| phytoene synthase [Citrus maxima]
          Length = 437

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 92/288 (31%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 140 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 199

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 200 TALDRWESRLEDLFQ---GRPFDMLDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYK 256

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 257 NFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRGVGED 316

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G+ +++    +K   +    +   A   +  +   
Sbjct: 317 AQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEA 376

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 377 SRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKIAALPIAYAK 424


>gi|125556830|gb|EAZ02436.1| hypothetical protein OsI_24538 [Oryza sativa Indica Group]
 gi|264665558|gb|ACY70856.1| phytoene synthase [Oryza sativa Indica Group]
 gi|264665560|gb|ACY70857.1| phytoene synthase [Oryza sativa Indica Group]
          Length = 421

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 92/300 (30%), Gaps = 9/300 (3%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           +  + K+         +          +     YL  +L     R ++  +Y +      
Sbjct: 112 IPIVPKDLDLPRNGLKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDE 171

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + D           L  W+   +                 L   + ++ +  Q F DMIE
Sbjct: 172 LVDGPNASHITPSALDRWEKRLDDLF---TGRPYDMLDAALSDTISKFPIDIQPFRDMIE 228

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQ 177
               D       +  +   Y + ++  +  ++  ++           +        GIA 
Sbjct: 229 GMRSDLRKTRYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIAN 288

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +  ++  +     RG++Y P D L   GL  E   +G  +++    +K   +    +  
Sbjct: 289 QLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFE 348

Query: 238 KAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +A   +  +      P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 349 EAERGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKLLALPVAYGR 408


>gi|19341|emb|CAA68575.1| unnamed protein product [Solanum lycopersicum]
          Length = 412

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 89/276 (32%), Gaps = 9/276 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +      L  +L  P  R ++  +Y +      + D          
Sbjct: 116 LLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPA 175

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++  E                 L   V  + +  Q F DMIE    D       +
Sbjct: 176 ALDRWENRLEDVFN---GRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKN 232

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 233 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 292

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K       K+  +A + +  +    
Sbjct: 293 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSAS 352

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
             P +  + +   +L   + + +   +     ++  
Sbjct: 353 RFPVWASLVLYRKILDEIEANDYNNFTKRAYVSKSK 388


>gi|19249|emb|CAA42969.1| phytoene synthase [Solanum lycopersicum]
 gi|190350978|gb|ACE75885.1| phytoene synthase [Solanum lycopersicum]
          Length = 412

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 89/276 (32%), Gaps = 9/276 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +      L  +L  P  R ++  +Y +      + D          
Sbjct: 116 LLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPA 175

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++  E                 L   V  + +  Q F DMIE    D       +
Sbjct: 176 ALDRWENRLEDVFN---GRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKN 232

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 233 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDA 292

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y P D L   GL  E   +G+ +D+  + +K       K+  +A + +  +    
Sbjct: 293 RRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSAS 352

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
             P +  + +   +L   + + +   +     ++  
Sbjct: 353 RFPVWASLVLYRKILDEIEANDYNNFTKRAYVSKSK 388


>gi|168037316|ref|XP_001771150.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677530|gb|EDQ63999.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 341

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 97/288 (33%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +     +       +     YL   L  P  + ++  +Y +      + D         
Sbjct: 43  NVLDEAYVRCGEVCAEYSKTFYLGTKLMTPERQRAIWAIYVWCRRTDELVDGPNASRITP 102

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+D FE   +    +        L   V ++ +  Q F DMI+    D       
Sbjct: 103 TALDRWEDRFEDIFR---GQPYDMLDAALADTVTKFPVDIQPFRDMIDGMRMDMVKSRYA 159

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 160 NFDELYLYCYNVAGTVGLMSVPVMGIAPESKATTESVYNNALALGIANQLTNILRDVGED 219

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   G+      +G+ SD+    +K   +    +  +A + +R +  D
Sbjct: 220 ARRGRIYLPQDELARFGISDADIFAGKVSDKWRAFMKDQIKRARVFFVEAEKGVRELDKD 279

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + + + +L   + + +   +      +  +   +  +  +
Sbjct: 280 SRWPVWSALILYQKILDAIEANDYDNFTRRAYVAKWQKLVSLPVAYGR 327


>gi|158337938|ref|YP_001519114.1| phytoene synthase [Acaryochloris marina MBIC11017]
 gi|158308179|gb|ABW29796.1| phytoene synthase [Acaryochloris marina MBIC11017]
          Length = 313

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 55/311 (17%), Positives = 105/311 (33%), Gaps = 23/311 (7%)

Query: 6   LTKNTRKEEKI--FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           L +  R  +K+           +   D     YL   L  P  R  +  +Y +      +
Sbjct: 4   LPETPRPTKKLASLEDSYEQCRQVTADYAKTFYLGTQLMSPEKRQGVWAIYVWCRLTDEL 63

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
            D  +   T    L  W++  ES   G   +      V L+  V ++ L  Q F DMI  
Sbjct: 64  VDGPQAAFTTSETLDKWEEQLESVFAGHPVDDPD---VALVDTVERFGLDIQPFRDMIAG 120

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR--------------- 168
              D   D     +    Y +R++  +  ++  I+  ER+   L+               
Sbjct: 121 QRMDLVRDRYETFEDLHLYCYRVAGTVGLMSAQIMGVERFCDRLQAPWSPPRVLNNPVNT 180

Query: 169 --VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  GIA  +  ++  +     RG++Y PL+ L A         +G   DR    +K
Sbjct: 181 INKAVDLGIANQLTNILRDVGEDARRGRIYLPLEDLAAFDYTEADLFNGVIDDRWRAFMK 240

Query: 227 IFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                  KY  +A   +  +  D   P +  + +   +L   + + + + +         
Sbjct: 241 FQIRRARKYFAQAESGIGTLQKDARWPVWSALVLYRQILDVIEQNQYDVFTRRAYVPSRR 300

Query: 286 RPWYMLSSSIK 296
           +   +  + +K
Sbjct: 301 KLMSLPLAWLK 311


>gi|145219507|ref|YP_001130216.1| farnesyl-diphosphate farnesyltransferase [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205671|gb|ABP36714.1| farnesyl-diphosphate farnesyltransferase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 311

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 100/290 (34%), Gaps = 12/290 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-- 75
                   +  +      YLA L  P   +  +  +Y     +  + D A   ++     
Sbjct: 22  EAAYRHCRQIAKHHAKTFYLATLFLPKRLQNPIFAIYALLRTVDDLVDNAEEKLSEGTIT 81

Query: 76  ------RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                  L+ WK   ++  +G   +   P  V     +  Y +  ++ L++IE    D  
Sbjct: 82  RETINGLLEDWKTRLKACYRGETGD--DPIMVAWNHTLESYPIAIEHPLELIEGVAMDIE 139

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                   +   Y ++++S +  + + I       A    I   GIA  +  ++  +   
Sbjct: 140 FSPFNTFDELYIYCYKVASVVGLMTSEIFGYSDPEALRHAID-LGIAMQLTNILRDIGED 198

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y PL+ L   G  RE F+    +D+    ++   E   +Y   + + +  +  +
Sbjct: 199 VDRGRIYIPLEDLERFGYSREEFMKKTMNDKFRNLMQFQIERARRYYLSSDKGIPMLQKE 258

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                 +      ++L   + + + + S     +   +   +     K +
Sbjct: 259 SRLAVALSSVNYGNILNSIEENSYDVFSQRAYRSFSQKILTLPQVWRKSK 308


>gi|8928282|sp|Q9SSU8|PSY_DAUCA RecName: Full=Phytoene synthase, chloroplastic; Flags: Precursor
 gi|6002459|dbj|BAA84763.1| phytoene synthase [Daucus carota]
 gi|79154687|gb|ABB52067.1| putative phytoene synthase [Daucus carota subsp. sativus]
          Length = 398

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 92/291 (31%), Gaps = 9/291 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 105 NLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHITP 164

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+            +    +   L   V  Y +  Q F DMI+    D       
Sbjct: 165 KALDRWEKRLNDLFD---GQPYDMYDAALADTVSTYPVDIQPFKDMIDGMRMDLKKSRYQ 221

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
              +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 222 TFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGED 281

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P + L   G+  E    G+ +D+    +K   +    +  +A + +  +   
Sbjct: 282 ARRGRIYLPQEELKLAGITPEYIFKGKVTDKWRSFMKGQIKRARMFFDEAEKGVAELSSA 341

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              P +  + + + +L   + + +   +      +  +   +  +  +  F
Sbjct: 342 SRWPVWASLLLYKQILDAIEANDYDNFTKRAYVGKAKKLVSLPLAYSRALF 392


>gi|164420112|gb|ABW80613.1| phytoene synthase E1 [Thinopyrum ponticum]
          Length = 430

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 135 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 194

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 195 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 251

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 252 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGTALALGLANQLTNILRDVGEDAR 311

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 312 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 371

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 372 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 417


>gi|229368565|gb|ACQ59145.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccon]
          Length = 427

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 132 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 191

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 192 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 248

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 249 DELYMYCYYVAGTVGLMSVPVMGIAPDSKATAESVYGAALALGLANQLTNILRDVGEDAR 308

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 309 RGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 368

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 369 WPVWASLLLYRQILDEIEANDYNNFTRRAYVGKAKKVLALPVAYGR 414


>gi|238481287|ref|NP_001154715.1| phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl
           transferase [Arabidopsis thaliana]
 gi|332005018|gb|AED92401.1| phytoene synthase [Arabidopsis thaliana]
          Length = 437

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 95/303 (31%), Gaps = 24/303 (7%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYY---------------FHTE 59
            +             +     YL  LL  P  R ++  +Y                +   
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRR 185

Query: 60  LMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
              + D         M L  W+   E   +             L   V +Y +  Q F D
Sbjct: 186 TDELVDGPNASHITPMALDRWEARLEDLFR---GRPFDMLDAALADTVARYPVDIQPFRD 242

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAG 174
           MIE    D       +      Y + ++  +  ++  ++  +        +        G
Sbjct: 243 MIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALG 302

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           IA  +  ++  +     RG++Y P D L   GL  E   +G+ +D+    +K+  +    
Sbjct: 303 IANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARM 362

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +  +A + +  +      P +  + +   +L   + + +   +      ++ +   +  +
Sbjct: 363 FFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLA 422

Query: 294 SIK 296
             K
Sbjct: 423 YAK 425


>gi|115470096|ref|NP_001058647.1| Os06g0729000 [Oryza sativa Japonica Group]
 gi|47678187|emb|CAG29391.1| phytoene synthase [Oryza sativa]
 gi|54291340|dbj|BAD62106.1| phytoene synthase [Oryza sativa Japonica Group]
 gi|113596687|dbj|BAF20561.1| Os06g0729000 [Oryza sativa Japonica Group]
 gi|125598580|gb|EAZ38360.1| hypothetical protein OsJ_22735 [Oryza sativa Japonica Group]
 gi|215697929|dbj|BAG92106.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|264665562|gb|ACY70858.1| phytoene synthase [Oryza sativa Japonica Group]
 gi|264665564|gb|ACY70859.1| phytoene synthase [Oryza sativa Japonica Group]
          Length = 420

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 92/300 (30%), Gaps = 9/300 (3%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           +  + K+         +          +     YL  +L     R ++  +Y +      
Sbjct: 111 IPIVPKDLDLPRNGLKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDE 170

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + D           L  W+   +                 L   + ++ +  Q F DMIE
Sbjct: 171 LVDGPNASHITPSALDRWEKRLDDLF---TGRPYDMLDAALSDTISKFPIDIQPFRDMIE 227

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQ 177
               D       +  +   Y + ++  +  ++  ++           +        GIA 
Sbjct: 228 GMRSDLRKTRYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIAN 287

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +  ++  +     RG++Y P D L   GL  E   +G  +++    +K   +    +  
Sbjct: 288 QLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFE 347

Query: 238 KAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +A   +  +      P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 348 EAERGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKLLALPVAYGR 407


>gi|229368575|gb|ACQ59150.1| phytoene synthase 1 [Triticum turgidum subsp. dicoccon]
 gi|229368577|gb|ACQ59151.1| phytoene synthase 1 [Triticum aestivum subsp. spelta]
          Length = 428

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 133 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 192

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 193 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 249

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 250 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 309

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +D+    +K   +    +  +A   +  +  +  
Sbjct: 310 RGRIYLPQDELAEAGLSDEDIFRGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESR 369

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 370 WPVWASLLLYRQILDEIEANDYNNFTRRAYVGKAKKVLALPVAYGR 415


>gi|264665622|gb|ACY70888.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|194307647|gb|ACF42354.1| phytoene synthase 7D [Triticum aestivum]
          Length = 430

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 89/297 (29%), Gaps = 9/297 (3%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           + +                     +     YL  LL     R ++  +Y +      + D
Sbjct: 124 VAREMDAPRGGLGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVD 183

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W+   E                 L   + ++ +  Q F DMI+   
Sbjct: 184 GPNASHITPQALDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMR 240

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIG 180
            D       +  +   Y + ++  +  ++  ++           +        G+A  + 
Sbjct: 241 TDLKKARYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLT 300

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  +     RG++Y P D L   GL  E    G  +D+    +K   +    +  +A 
Sbjct: 301 NILRDVGEDARRGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAE 360

Query: 241 EEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +  +  +   P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 361 RGVTELRKESRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 417


>gi|194462461|gb|ACF72686.1| phytoene synthase 1 [Triticum aestivum]
 gi|229368581|gb|ACQ59153.1| phytoene synthase 1 [Aegilops tauschii]
 gi|229368583|gb|ACQ59154.1| phytoene synthase 1 [Aegilops tauschii]
 gi|229368585|gb|ACQ59155.1| phytoene synthase 1 [Aegilops tauschii]
 gi|229368587|gb|ACQ59156.1| phytoene synthase 1 [Triticum aestivum subsp. spelta]
 gi|229368589|gb|ACQ59157.1| phytoene synthase 1 [Triticum aestivum subsp. spelta]
 gi|262479034|gb|ACY68557.1| phytoene synthase 1 [Triticum aestivum]
 gi|262479036|gb|ACY68558.1| phytoene synthase 1 [Triticum aestivum]
 gi|262479038|gb|ACY68559.1| phytoene synthase 1 [Triticum aestivum]
 gi|262479040|gb|ACY68560.1| phytoene synthase 1 [Triticum aestivum]
 gi|262479042|gb|ACY68561.1| phytoene synthase 1 [Aegilops tauschii]
 gi|262479044|gb|ACY68562.1| phytoene synthase 1 [Aegilops tauschii]
          Length = 427

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 89/297 (29%), Gaps = 9/297 (3%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           + +                     +     YL  LL     R ++  +Y +      + D
Sbjct: 121 VAREMDAPRGGLGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVD 180

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W+   E                 L   + ++ +  Q F DMI+   
Sbjct: 181 GPNASHITPQALDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMR 237

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIG 180
            D       +  +   Y + ++  +  ++  ++           +        G+A  + 
Sbjct: 238 TDLKKARYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLT 297

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  +     RG++Y P D L   GL  E    G  +D+    +K   +    +  +A 
Sbjct: 298 NILRDVGEDARRGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAE 357

Query: 241 EEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +  +  +   P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 358 RGVTELRKESRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGR 414


>gi|110598630|ref|ZP_01386896.1| Squalene/phytoene synthase [Chlorobium ferrooxidans DSM 13031]
 gi|110339742|gb|EAT58251.1| Squalene/phytoene synthase [Chlorobium ferrooxidans DSM 13031]
          Length = 310

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 100/292 (34%), Gaps = 12/292 (4%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR-- 73
                  +  +  +      YLA L  P   +  +  +Y     +  + D A   +T   
Sbjct: 19  TLENAYQYCRQISQHHAKTFYLATLFLPKRQQNPIFAIYALLRTVDDLVDMAEEKLTNGQ 78

Query: 74  ------DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
                    L+ WK   ++   G       P  +     ++ + +P +Y LD+++    D
Sbjct: 79  ITKEEIQRLLEGWKSRLKACYAGESV--NDPILMAWQDTLKSFPIPIEYPLDLMDGVAMD 136

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
                     +   Y ++++S +  + + I       A    I+  GIA  +  ++  + 
Sbjct: 137 IVFKPFETFDELYVYCYKVASVVGLMTSEIFGYRDKQALQHAIE-LGIAMQLTNILRDVG 195

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               RG++Y PL+ L       E F+   N++     IK   E    Y   + + +  + 
Sbjct: 196 EDVDRGRIYLPLEDLRRFNYSEEEFMKKTNNENFRNLIKFQIERARGYYRSSEKGIPMLE 255

Query: 248 PDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                A  I      ++L   + +G+ + S     +   +   +     K R
Sbjct: 256 KRSRFAVGISSINYCNILNAIEKNGYDVFSKRAYRSFYQKIRTIPFVWYKTR 307


>gi|264665624|gb|ACY70889.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIASESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|264665632|gb|ACY70893.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665638|gb|ACY70896.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|147827063|emb|CAN70878.1| hypothetical protein VITISV_032970 [Vitis vinifera]
          Length = 428

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 93/286 (32%), Gaps = 9/286 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 98  DLLNGAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHMSP 157

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+       +         +   L   V +Y +  Q F DMIE    D       
Sbjct: 158 KALDRWEQRLIDLFE---GHPYDMYDAALSDTVAKYPVDVQPFKDMIEGMRLDLRKSRYN 214

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
              +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 215 SFDELYLYCYYVAGTVGLMSVPVMGISPDSKASTESVYNAALALGIANQLTNILRDVGED 274

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +  L G+ +D+    +K   +    +  +A + +R +   
Sbjct: 275 ARRGRIYLPQDELERAGLSDDDILRGKVTDKWRSFMKGQIKRARMFFDEAEKGVRELNSA 334

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
              P +  + +   +L   + + +   +      +L +   +  + 
Sbjct: 335 SRWPVWASLMLYRQILDAIEANDYNNFTKRAYVGKLKKLVSLPIAY 380


>gi|13542332|gb|AAD38051.2| phytoene synthase [Citrus x paradisi]
          Length = 436

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 91/288 (31%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL     R ++  +Y +      + D         
Sbjct: 139 SLLSEAYDRCGEVCAEYAKTFYLGTLLMTSERRRAIWAIYVWCRRTDELVDGPNASHITP 198

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +    +        L   V ++ +  Q F DMIE    D       
Sbjct: 199 TALDRWESRLEDLFR---GQPFDMLDAALSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYK 255

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 256 NFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGED 315

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   +G+ + +    +K   +    +   A   +  +   
Sbjct: 316 APRGRVYLPQDELAQAGLSDDDIFAGEVTIKWRNFMKNQIKRARMFFDMAENGVTELSEA 375

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + + +   +     ++  +   +  +  K
Sbjct: 376 SRWPVWASLLLYRQILDEIEANDYNNFTKRACVSKAKKIAALPIAYAK 423


>gi|264665590|gb|ACY70872.1| phytoene synthase [Tripsacum sp. ZF-2009]
          Length = 413

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 118 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 177

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       D 
Sbjct: 178 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNDF 234

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 235 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 294

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 295 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 354

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 355 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 398


>gi|238011072|gb|ACR36571.1| unknown [Zea mays]
          Length = 369

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 74  LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 133

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 134 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 190

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 191 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 250

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 251 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 310

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 311 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 354


>gi|1346883|sp|P49085|PSY_MAIZE RecName: Full=Phytoene synthase, chloroplastic; Flags: Precursor
 gi|1098665|gb|AAB60314.1| phytoene synthase [Zea mays]
          Length = 410

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVNELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|264665600|gb|ACY70877.1| phytoene synthase [Zea mays subsp. huehuetenangensis]
 gi|264665630|gb|ACY70892.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|56785583|gb|AAW28996.1| chloroplast phytoene synthase 1 [Sorghum bicolor]
 gi|264665582|gb|ACY70868.1| phytoene synthase [Sorghum bicolor]
 gi|264665586|gb|ACY70870.1| phytoene synthase [Sorghum bicolor]
 gi|264665588|gb|ACY70871.1| phytoene synthase [Sorghum bicolor]
          Length = 419

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 87/284 (30%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            ++          +     YL  +L     R ++  +Y +      + D           
Sbjct: 124 LNQAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 183

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 184 LDRWEKRLEDLFA---GRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 240

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 241 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAT 300

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 301 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 360

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 361 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 404


>gi|264665592|gb|ACY70873.1| phytoene synthase [Zea diploperennis]
          Length = 411

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 116 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 175

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 176 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 232

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 233 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 292

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 293 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 352

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 353 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 396


>gi|264665584|gb|ACY70869.1| phytoene synthase [Sorghum bicolor]
          Length = 421

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 87/284 (30%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            ++          +     YL  +L     R ++  +Y +      + D           
Sbjct: 126 LNQAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 185

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 186 LDRWEKRLEDLFA---GRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 242

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 243 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAT 302

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 303 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 362

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 363 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 406


>gi|39842609|gb|AAR31885.1| chloroplast phytoene synthase [Zea mays]
 gi|264665644|gb|ACY70899.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665646|gb|ACY70900.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665648|gb|ACY70901.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665650|gb|ACY70902.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665652|gb|ACY70903.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665654|gb|ACY70904.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665658|gb|ACY70906.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665660|gb|ACY70907.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665662|gb|ACY70908.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665664|gb|ACY70909.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665670|gb|ACY70912.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665672|gb|ACY70913.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665676|gb|ACY70915.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665678|gb|ACY70916.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665680|gb|ACY70917.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665682|gb|ACY70918.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665684|gb|ACY70919.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665686|gb|ACY70920.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665688|gb|ACY70921.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665690|gb|ACY70922.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665692|gb|ACY70923.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665694|gb|ACY70924.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665696|gb|ACY70925.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665698|gb|ACY70926.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665700|gb|ACY70927.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665702|gb|ACY70928.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665704|gb|ACY70929.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665706|gb|ACY70930.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665708|gb|ACY70931.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665710|gb|ACY70932.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665712|gb|ACY70933.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665714|gb|ACY70934.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665716|gb|ACY70935.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVNELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|264665596|gb|ACY70875.1| phytoene synthase [Zea luxurians]
 gi|264665598|gb|ACY70876.1| phytoene synthase [Zea luxurians]
          Length = 410

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|264665612|gb|ACY70883.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDXWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIASESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|264665602|gb|ACY70878.1| phytoene synthase [Zea mays subsp. mexicana]
          Length = 410

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSGTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|119486000|ref|ZP_01620062.1| phytoene synthase [Lyngbya sp. PCC 8106]
 gi|119456775|gb|EAW37903.1| phytoene synthase [Lyngbya sp. PCC 8106]
          Length = 300

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 103/300 (34%), Gaps = 16/300 (5%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           +             +   +     Y+   L P   R ++  +Y +        D      
Sbjct: 2   RTLASLEDSYELCRQITAEYSKTFYMGTQLMPFAKRRAIWAIYVWCRRTDEWVDGPLASS 61

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
           T    L  W+   ES       + I    V L+  + Q+ L  Q F DMI     D Y  
Sbjct: 62  TTAETLDHWEKHLESIFA---GDPIDDEDVALVDTLSQFPLDIQPFRDMIAGQRMDLYRS 118

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------------YAGIAQFI 179
                ++ + Y +R++  +  ++  ++   +        +              GIA  +
Sbjct: 119 RYETFEELKLYCYRVAGTVGLMSMAVMGVAQSGQKAPWDQEQGFDIPTDKAIALGIANQL 178

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
             ++  +     RG++Y PL+ L      ++  L+G   DR    ++   +   KY   A
Sbjct: 179 TNILRDVGEDARRGRIYLPLEELALFNYTQDDLLNGVVDDRWRELMRFQIQRARKYYTLA 238

Query: 240 REEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              +R + PD+  P +  + +   +L   + + + + S         +   +  + ++ +
Sbjct: 239 ECGIRALSPDIRWPVWSALLLYSKILNEIERNQYDVFSKRAYVPTRRKLLCLPVALLRSK 298


>gi|264665594|gb|ACY70874.1| phytoene synthase [Zea diploperennis]
          Length = 411

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 116 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 175

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 176 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 232

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 233 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 292

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 293 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 352

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 353 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 396


>gi|264665618|gb|ACY70886.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665620|gb|ACY70887.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|167908781|ref|NP_001108124.2| phytoene synthase, chloroplastic precursor [Zea mays]
 gi|38037628|gb|AAR08445.1| chloroplast phytoene synthase 1 [Zea mays]
 gi|60101460|gb|AAX13806.1| phytoene synthase 1 [Zea mays]
 gi|194689884|gb|ACF79026.1| unknown [Zea mays]
 gi|264665606|gb|ACY70880.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665626|gb|ACY70890.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665642|gb|ACY70898.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665656|gb|ACY70905.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665674|gb|ACY70914.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|224066551|ref|XP_002302132.1| predicted protein [Populus trichocarpa]
 gi|222843858|gb|EEE81405.1| predicted protein [Populus trichocarpa]
          Length = 304

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 96/288 (33%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 5   DLLNGAYNRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHITP 64

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+       +         +   L + V +Y +  Q F DMIE    D       
Sbjct: 65  KALDRWEQRLNELFE---GRPYDMYDAALSNTVSKYPVDIQPFKDMIEGMRMDLKKSRYK 121

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIH 189
           D  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 122 DFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTESVYNAALALGIANQLTNILRDVGED 181

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K+  +    +  +A + +  +   
Sbjct: 182 ARRGRIYLPQDELAQAGLSDEDIFNGKVTDKWRSFMKVQIKRARMFFDEAEKGVAELNDA 241

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + + + +L   + + +   S      +  +   +  +  +
Sbjct: 242 SRWPVWASLLLYKQILDSIEANDYDNFSKRAYVGKTKKFASLPVAYGR 289


>gi|264665608|gb|ACY70881.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665610|gb|ACY70882.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665614|gb|ACY70884.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665616|gb|ACY70885.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665634|gb|ACY70894.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665636|gb|ACY70895.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665666|gb|ACY70910.1| phytoene synthase [Zea mays subsp. mays]
 gi|264665668|gb|ACY70911.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIASESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|264665604|gb|ACY70879.1| phytoene synthase [Zea mays subsp. parviglumis]
 gi|264665628|gb|ACY70891.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  215 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|224082588|ref|XP_002306754.1| predicted protein [Populus trichocarpa]
 gi|222856203|gb|EEE93750.1| predicted protein [Populus trichocarpa]
          Length = 405

 Score =  215 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 93/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 106 DLLNGAYNRCGDVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHITP 165

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+       +         +   L   V +Y +  Q F DMI+    D       
Sbjct: 166 KALDRWERRLNDLFE---GRPYDMYDAALSITVSKYPVDIQPFKDMIKGMRMDLKKSRYK 222

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIH 189
           D  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 223 DFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTESVYNAALALGIANQLTNILRDVGED 282

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E    G+ +D+    +K   +    +  +A + +  +   
Sbjct: 283 ARRGRIYLPQDELAQAGLSDEDIFKGKVTDKWRSFMKGQIKRARMFFDEAEKGVAELNAA 342

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + + + +L   + + +   +      +  +   +  +  +
Sbjct: 343 SRWPVWASLLLYKQILDAIEVNDYDNFTKRAYVGKAKKFASLPIAYGR 390


>gi|264665580|gb|ACY70867.1| phytoene synthase [Coix lacryma-jobi]
          Length = 410

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLFA---GRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|78187215|ref|YP_375258.1| phytoene desaturase [Chlorobium luteolum DSM 273]
 gi|78167117|gb|ABB24215.1| phytoene desaturase [Chlorobium luteolum DSM 273]
          Length = 311

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 104/291 (35%), Gaps = 12/291 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR--- 73
                 +     +      YLA L  P   +  +  +Y     +  + D A++ +     
Sbjct: 21  LDSAYRYCREIAKHHAKTFYLATLFLPKPQQKPIFAIYALLRTVDDLVDNAQDQLEAGHI 80

Query: 74  -----DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                +  L+ W +  ++  +G       P  +     + + ++P +  L++IE    D 
Sbjct: 81  TRTDINRMLEEWMEKLQNCYQGKHG--GDPIMMAWHDTLLRCNIPIELPLELIEGVAMDI 138

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
             +      +   Y ++++S +  + + I       A    I   GIA  +  ++  +  
Sbjct: 139 EFNPFQTFDELYVYCYKVASVVGLMTSEIFGYSDRRALQHAID-LGIAMQLTNILRDVGE 197

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              RG++Y PL+ L   G  RE F+    ++R    ++   E    Y   A E +  +  
Sbjct: 198 DIDRGRIYIPLEDLERFGYSREEFMQKTMNERFKKLMQFQIERARNYYLSADEGIPMLEK 257

Query: 249 DVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
               A         ++L   + +G+ + +     + + +   +    +K R
Sbjct: 258 RSRFAVAVSSVNYGNILNAIEENGYDVFTKRAYRSFIQKISTIPHVWLKTR 308


>gi|42521626|gb|AAS18307.1| phytoene synthase 1 [Oryza sativa Indica Group]
          Length = 421

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 91/300 (30%), Gaps = 9/300 (3%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           +  + K+         +          +     YL  +L     R ++  +Y +      
Sbjct: 112 IPIVPKDLDLPRNGLKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDE 171

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + D           L  W+   +                 L   + +  +  Q F DMIE
Sbjct: 172 LVDGPNASHITPSALDRWEKRLDDLF---TGRPYDMLDAALSDTISKSPIDIQPFRDMIE 228

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQ 177
               D       +  +   Y + ++  +  ++  ++           +        GIA 
Sbjct: 229 GMRSDLRKTRYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIAN 288

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +  ++  +     RG++Y P D L   GL  E   +G  +++    +K   +    +  
Sbjct: 289 QLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFE 348

Query: 238 KAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +A   +  +      P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 349 EAERGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRTYVGKAKKLLALPVAYGR 408


>gi|237746070|ref|ZP_04576550.1| phytoene synthase [Oxalobacter formigenes HOxBLS]
 gi|229377421|gb|EEO27512.1| phytoene synthase [Oxalobacter formigenes HOxBLS]
          Length = 278

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 92/278 (33%), Gaps = 6/278 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWW 80
            +            Y +    PP+ R +++ LY F  E+  + D    +  +   +L  W
Sbjct: 5   QYCQHKAAGSGSSFYGSFRFLPPVRRKAITALYAFCREVDDIVDDRSLDTESARRKLAGW 64

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +                  +  L+  ++ + +       +++    D          + E
Sbjct: 65  RREIADMYA---GHPDHLITQALMPHLQAFSIEESQLGAIVDGMEMDLDRKRYASFGELE 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y + ++  +  LA  I    + + +L   +  G+A  +  +I  +      G++Y P D
Sbjct: 122 KYCWHVAGVVGILAAKIFGVTQ-ADTLEYAEKLGLAFQLTNIIRDVGEDIGMGRIYLPQD 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSI 259
            L   G+  +     + +      ++  A        +A   +     +   P  +  +I
Sbjct: 181 ELERFGVTEDDLFKRRYTGAFRKLMQFQAARAQGLYEEAFSLLPEADREAQKPGVMMATI 240

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
              +L   +   F +++   +  +  + W    + +  
Sbjct: 241 YRELLGEIERCDFPVLTERVSLTKSRKLWLAWKTWLNG 278


>gi|22299103|ref|NP_682350.1| phytoene synthase [Thermosynechococcus elongatus BP-1]
 gi|22295285|dbj|BAC09112.1| phytoene synthase [Thermosynechococcus elongatus BP-1]
          Length = 311

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 100/299 (33%), Gaps = 19/299 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    +         YL  LL PP  R ++  +Y +      + D  +   T    
Sbjct: 16  LDEAYELCRQVTATYAKTFYLGTLLMPPAKRRAIWAIYVWCRRTDELVDGPQAATTTLAT 75

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E               + L + +  Y L  Q F DMI     D         
Sbjct: 76  LDEWEARLEDIF---SGRPHDAMDLALTATLEHYPLNIQPFRDMIAGQRMDLRRSRYETF 132

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLR---------------VIKYAGIAQFIGQ 181
            + E Y +R++  +  ++  ++  + YS  L                     GIA  +  
Sbjct: 133 AELELYCYRVAGTVGLMSLEVMGGDPYSDRLCAPWVDPYQAKGTLKDQAIALGIANQLTN 192

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           ++  +     RG++Y PL+ L A     E    G   DR    ++   +   ++  +A  
Sbjct: 193 ILRDVGEDMRRGRIYLPLEDLAAFNYTEEDLQRGVIDDRWRALMRFQIQRARQFYREAEV 252

Query: 242 EMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            + Y+  D   P +  + +   +L   + + + + +     +   +  ++  S +K  F
Sbjct: 253 GVAYLERDARWPVWSALMLYRQILDVIEANDYDVFNRRAFVSDWRKLLFIPVSWLKASF 311


>gi|308804295|ref|XP_003079460.1| phytoene synthase (ISS) [Ostreococcus tauri]
 gi|116057915|emb|CAL54118.1| phytoene synthase (ISS) [Ostreococcus tauri]
          Length = 408

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 97/298 (32%), Gaps = 17/298 (5%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
             +              +     YL   L  P  + ++  +Y +      + D       
Sbjct: 107 PSETLDTAYERCREVTAEYAKTFYLGTKLMTPEKQRAIWAIYVWCRRTDELVDGPNASHI 166

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L  W++  E   +      +      L   + ++ +  Q F DMI+    D     
Sbjct: 167 TPEALDRWEERLEGIFE---GRPVDVIDATLCDTLARFPVDIQPFRDMIDGMRMDLVKPR 223

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLP 187
                +   Y +R++  +  ++  I+  +           +     G+A  +  ++  + 
Sbjct: 224 YETFDELYEYCYRVAGTVGLMSMPIMGCDENFTGDVKKVYKAALALGLANQLTNILRDVG 283

Query: 188 IHYH-RGQLYFPLDILGAVGLDRESFLS-------GQNSDRISLAIKIFAELGLKYLFKA 239
                R ++Y PL+ L   G+  +  L        G+  DR    +K   +   K    A
Sbjct: 284 EDARERNRIYVPLEDLKKFGISEQEVLRGMFSPTTGKVDDRWVAFMKFQIDRARKVFKDA 343

Query: 240 REEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            + +  +  D   P +  + +  S+L   + +G+   +      ++ +   +  S IK
Sbjct: 344 EDGVNCLHKDARWPVWSALDVYRSILDAIEANGYDNFTQRAYVPKVDKFLMLPQSYIK 401


>gi|298245566|ref|ZP_06969372.1| Phytoene synthase [Ktedonobacter racemifer DSM 44963]
 gi|297553047|gb|EFH86912.1| Phytoene synthase [Ktedonobacter racemifer DSM 44963]
          Length = 311

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 97/297 (32%), Gaps = 18/297 (6%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +   +    +  +  +      Y      P   R ++  +Y F   +  + D A      
Sbjct: 3   QSSVTDPYEYCRKITQRASKTFYWGSSFLPQPKRKAIWAVYAFCRMVDDIVDEAVEAEET 62

Query: 74  DM--------------RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
                            L +W    +    G  +    P       +++ Y +P +  L+
Sbjct: 63  REPRTAHLYGVKDPRCELDYWHQSLQHVYNGEGSGDS-PIMQAWEDMLQTYAVPIKPALE 121

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFI 179
           +++    D  N       + E Y +R++  +  L + I       A    ++  GIA  +
Sbjct: 122 LLDGVAMDLSNRRYQSFAELELYCYRVAGTVGLLTSPIFGYNDERALTYAVE-LGIALQL 180

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
             ++  +     R ++Y PL+ +       E    G  +D     I        +Y  + 
Sbjct: 181 TNILRDVGEDLRRNRIYLPLEEMERFRYSEEDLQQGVINDAFRELIHFQMARAEEYYIRG 240

Query: 240 REEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           ++ +  + PD      +   + + +L+  +++ + + +   +     +     S+  
Sbjct: 241 QQGIGLLHPDCQLSVKLSGVLYQRILERIRSNDYNVFTKRASVPLQTKL-VAASACW 296


>gi|222110334|ref|YP_002552598.1| squalene synthase hpnd [Acidovorax ebreus TPSY]
 gi|221729778|gb|ACM32598.1| squalene synthase HpnD [Acidovorax ebreus TPSY]
          Length = 279

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 95/272 (34%), Gaps = 5/272 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V +         Y A L  P   R +++  Y F  E+  V D          +L WW+
Sbjct: 5   QYVQQKAAASGSSFYYAFLFLPRERRTAITAFYAFCREVDDVVDEVSEASVAQAKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                +      +   P    L+     Y +  ++ L +IE    D       D      
Sbjct: 65  GEVAKAFA---GQPSHPVMQALMPHAAAYGIEQRHLLAVIEGCQMDLEQTRYLDFAGLAR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I   ++   + +     G+A  +  +I  +     RG++Y P+  
Sbjct: 122 YCHLVAGVVGEVAARI-FGQQDERTTQYAHKLGLAFQLTNIIRDVGEDAMRGRIYLPISE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +        + S+R +  ++  AE    +  +A   +  +      P  +  SI 
Sbjct: 181 LQQFDVKAHEITKREYSERFTALMRFQAERAHLFYDQALALLPDVDRRAQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            ++L+  +   F+++    +   L + W    
Sbjct: 241 RTLLREIEADNFQVLHQRTSLTPLRKFWLAWK 272


>gi|194336790|ref|YP_002018584.1| Squalene/phytoene synthase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309267|gb|ACF43967.1| Squalene/phytoene synthase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 310

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 101/302 (33%), Gaps = 13/302 (4%)

Query: 7   TKNTRKEEKI-FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           +  T+ E+ I       +  +  +      YLA +  P   +  +  +Y     +  V D
Sbjct: 9   STGTKTEKLITLEDAYSYCRQISQHHAKTFYLASMFLPKKQQKPIFAIYALLRTVDDVVD 68

Query: 66  TAR--------NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYF 117
            A                 L+ WK    +   G       P  +     ++ Y +P +  
Sbjct: 69  MAEVKLNNGLITSEEIQRILEEWKSKLTACYGGKTG--NDPIMIAWHDTLKSYSIPIELP 126

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQ 177
           LD+++    D              Y +++++ +  + + I       A    I+  GIA 
Sbjct: 127 LDLMDGVAMDIEFKPFETFDDLYVYCYKVAAVVGLMTSEIFGYSDKRALEHAIE-LGIAM 185

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +  ++  +     RG++Y PL+ L      +E  +  + +D     +K   E    Y  
Sbjct: 186 QLTNILRDIGEDVDRGRIYLPLEDLRRFNYSKEEMMQKKINDNFLNLMKFQIERARGYYR 245

Query: 238 KAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            + + +  +  +      I      ++L   + + + + S     +   +   +    +K
Sbjct: 246 SSDKGIPMLEKESRFGVAISSVNYGNILTAIEKNQYDVFSTRAYRSFFQKISTIPYVWLK 305

Query: 297 KR 298
            R
Sbjct: 306 TR 307


>gi|46487|emb|CAA45350.1| phytoene synthase [Synechococcus elongatus PCC 7942]
          Length = 307

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 99/308 (32%), Gaps = 14/308 (4%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           +L+ +     +     S       +         YL  LL P   R ++  +Y +     
Sbjct: 1   MLQMIPARPSRALASLSEAYEECRQITARYAKTFYLGTLLMPEAKRQAIWAIYVWCRRTD 60

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
            + D  +   T    L  W+   E        E      V L+  + +Y L  Q F DMI
Sbjct: 61  ELVDGPQAAQTNFATLDAWERRLERLFA---GEPEDDCDVALVDTLARYPLDIQPFRDMI 117

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------- 171
           E    D   +     +    Y +R++  +  ++  ++  E  ++                
Sbjct: 118 EGQRMDLLQNRYSTFEDLYTYCYRVAGTVGLMSQPVMGIESTNSRAPWDPTTPPDPTQEA 177

Query: 172 -YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P + L       +   +G   DR    ++   +
Sbjct: 178 LALGIANQLTNILRDVGEDARRGRIYLPQEELAQFNYSEQDLFNGVIDDRWRAFMQFQLD 237

Query: 231 LGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
               Y  +A   +       +P +  + +   +L   + + + +           +   +
Sbjct: 238 RARDYFEQAERCIELSHDARWPVWASLMLYREILDVIEQNNYDVFRKRAYVPTWRKLCSL 297

Query: 291 LSSSIKKR 298
             + ++  
Sbjct: 298 PVAMLRAT 305


>gi|238836224|gb|ACR61392.1| phytoene synthase protein [Fragaria x ananassa]
          Length = 398

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 93/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 99  DLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASYITP 158

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+       +         +   L   V +Y +  Q F DM+E    D       
Sbjct: 159 KALDRWEKRLTDLFE---GRPYDMYDAALSDTVTKYPVDIQPFKDMVEGMRLDLRKSRYQ 215

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 216 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTESVYNAALALGIANQLTNILRDVGED 275

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +    G+ +D+    +K   +    +  +A + +  +   
Sbjct: 276 ARRGRIYLPQDELAQAGLSDDDIFRGKVTDKWQSFMKGQIKRARMFFDEAEKGVAELNSA 335

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + +   +L   + +G+   +      +  +   +  +  +
Sbjct: 336 SRWPVWASLLLYRQILDAIEANGYDNFTKRAYVGKAKKLVSLPIAYGR 383


>gi|220909552|ref|YP_002484863.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7425]
 gi|219866163|gb|ACL46502.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7425]
          Length = 312

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 105/310 (33%), Gaps = 22/310 (7%)

Query: 6   LTKNTR-KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           L+K  R K             + +       YL+ L  P   R ++  +Y +      + 
Sbjct: 4   LSKTERMKPVASLPEAYELCRQIIAFYSKTFYLSTLTFPQPKRQAIWAIYVWCRRTDELV 63

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D  +   T    L  W++  E+   G  A++     V L+  +  + L  Q F DMI   
Sbjct: 64  DGPQAVSTTLETLDAWEERLENIFAGSPADAAD---VALVDTIAHFPLDIQPFRDMIAGQ 120

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----------------DSERYSASL 167
             D Y       +    Y +R++  +  +++ ++                   E      
Sbjct: 121 RMDLYRSRYETFEALHLYCYRVAGTVGLMSSAVMGLEPFCDRLRAPWVNVYQPETDCNPQ 180

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G+A+ +  ++  +     RG++Y PL+ L          L G    R    ++ 
Sbjct: 181 EQAVALGVAKQLTNILRDVGEDARRGRIYLPLEDLALFNYSEADLLKGVIDHRWRQLMQF 240

Query: 228 FAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
             +   K+  +A   ++ +  D   P +  + +   +L   + + + + +         +
Sbjct: 241 QIQRARKFYAQAESGIQCLSRDARWPVWSALILYRQILDVIERNHYDVFTQRAYVPGGRK 300

Query: 287 PWYMLSSSIK 296
              +  + +K
Sbjct: 301 LLSLSKAWLK 310


>gi|121593614|ref|YP_985510.1| farnesyl-diphosphate farnesyltransferase [Acidovorax sp. JS42]
 gi|120605694|gb|ABM41434.1| farnesyl-diphosphate farnesyltransferase [Acidovorax sp. JS42]
          Length = 279

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 95/272 (34%), Gaps = 5/272 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V +         Y A L  P   R +++  Y F  E+  V D          +L WW+
Sbjct: 5   QYVQQKAAASGSSFYYAFLFLPRERRTAITAFYAFCREVDDVVDEVSEASVAQAKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                +      +   P    L+     Y +  ++ L +IE    D       D      
Sbjct: 65  GEVAKAFA---GQPSHPVMQALMPHAAAYGIEQRHLLAVIEGCQMDLEQTRYLDFAGLAR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I   ++   + +     G+A  +  +I  +     RG++Y P+  
Sbjct: 122 YCHLVAGVVGEVAARI-FGQQDERTTQYAHKLGLAFQLTNIIRDVGEDAMRGRIYLPISE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +        + S+R +  ++  AE    +  +A   +  +      P  +  SI 
Sbjct: 181 LQQFDVKAHEITKREYSERFTTLMRFQAERAHLFYDQALALLPDVDRRAQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            ++L+  +   F+++    +   L + W    
Sbjct: 241 RTLLREIEADNFQVLHQRTSLTPLRKFWLAWK 272


>gi|18476089|gb|AAK07735.1| phytoene synthase [Oryza sativa Japonica Group]
          Length = 404

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL   L  P  R ++  +Y +      + D   +      
Sbjct: 116 LLGDAYHRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPK 175

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E   +         +   L   V ++ +  Q F DMIE    D +      
Sbjct: 176 ALDRWEKRLEDLFE---GRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYRS 232

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  +   ++           +        GIA  +  ++  +    
Sbjct: 233 FDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDS 292

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y PLD L   GL  E    G+ +D+    +K        +  +A + + ++    
Sbjct: 293 RRGRIYLPLDELAEAGLTEEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSAS 352

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     N+  +   +  +  +
Sbjct: 353 RWPVLASLWLYRQILDAIEANDYNNFTKRAYVNKAKKLLSLPVAYAR 399


>gi|264665640|gb|ACY70897.1| phytoene synthase [Zea mays subsp. mays]
          Length = 410

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 84/284 (29%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L     ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLF---TGRPYDMLDAALSDTTSRFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIASESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 395


>gi|119357535|ref|YP_912179.1| squalene/phytoene synthase [Chlorobium phaeobacteroides DSM 266]
 gi|119354884|gb|ABL65755.1| Squalene/phytoene synthase [Chlorobium phaeobacteroides DSM 266]
          Length = 310

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 101/298 (33%), Gaps = 13/298 (4%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           +N  +          +  +  +      YLA L  P   +  +  +Y     +  + D A
Sbjct: 12  QNAERP-TTLQNSYNYCRQISKHHAKTFYLASLFLPKKQQNPIFAMYALLRTVDDLVDLA 70

Query: 68  RNPITR--------DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + +T         +  L+ WK    +   G  ++   P        ++ Y +P +  LD
Sbjct: 71  EDKLTNGQITRDEINRLLEEWKIRLRNCYAGQPSD--DPIMTAWHDTIQHYSIPLELPLD 128

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFI 179
           +I+    D              Y ++++S +  + + I       A    I+  GIA  +
Sbjct: 129 LIDGVAMDIEFKPFETFDDLYVYCYKVASVVGLMTSEIFGYTNKDALQHAIE-LGIAMQL 187

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
             ++  +     R ++Y PL+ L       + F+  + +      +K        Y   +
Sbjct: 188 TNILRDIGEDVDRNRIYLPLEDLRKFNYTEKEFMQKKINANFLELMKFQINRARHYYRSS 247

Query: 240 REEMRYILPDVFPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            + +  +  +   A +  S+   ++L   + + + + S     +   +   +     K
Sbjct: 248 EKGIPMLEKNSRFAVMISSLNYSNILNAIEENNYDVFSQRAYRSFYQKISTIPYVWYK 305


>gi|326532598|dbj|BAK05228.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 426

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 87/284 (30%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 131 LREAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 190

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 191 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 247

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 248 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 307

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +++    +K   +    +  +A + +  +  +  
Sbjct: 308 RGRIYLPQDELAEAGLSDEDIFKGVVTEKWRKFMKRQIKRARMFFTEAEQGVTELRKESR 367

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 368 WPVWASMLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAY 411


>gi|225446787|ref|XP_002283193.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 396

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 93/286 (32%), Gaps = 9/286 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 98  DLLNGAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHMSP 157

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+       +         +   L   V +Y +  Q F DMIE    D       
Sbjct: 158 KALDRWEQRLIDLFE---GHPYDMYDAALSDTVAKYPVDVQPFKDMIEGMRLDLRKSRYN 214

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
              +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 215 SFDELYLYCYYVAGTVGLMSVPVMGISPDSKASTESVYNAALALGIANQLTNILRDVGED 274

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +  L G+ +D+    +K   +    +  +A + +R +   
Sbjct: 275 ARRGRIYLPQDELERAGLSDDDILRGKVTDKWRSFMKGQIKRARMFFDEAEKGVRELNSA 334

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
              P +  + +   +L   + + +   +      +L +   +  + 
Sbjct: 335 SRWPVWASLMLYRQILDAIEANDYNNFTKRAYVGKLKKLVSLPIAY 380


>gi|317057972|gb|ADU90690.1| putative phytoene/squalene synthase [Collimonas sp. MPS11E8]
          Length = 277

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 96/277 (34%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y + L  P   R +++ LY F  E+    D   +      +L WW+
Sbjct: 5   DYCQQKAAQSGSSFYYSFLFLPVERRRAITALYAFCREVDDTVDDCTDESVARSKLMWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P +  L   +  Y L  ++   +I+    D       D    + 
Sbjct: 65  KEIAAMLA---GNPSHPVTQALQPHLLTYGLEGKHLQAIIDGMEMDLNQTRYLDYPGLKQ 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++  +  L+  I    +    L   +  G+A  +  +I  +     +G++Y P++ 
Sbjct: 122 YCWHVAGVVGILSASIFGVSQPQT-LEFAEKLGLAFQLTNIIRDVGEDGRKGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S+     ++       +   +A   +         P  +  +I 
Sbjct: 181 LQQFNVTAADILNARYSENFVNLMRFQVARAQQAYDEAFALLPKQDRRAQRPGLMMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  GF +++   +   + + W    + ++ 
Sbjct: 241 RALLGEIERDGFHVLNQRISLTPIRKLWLAWKTYVRG 277


>gi|326507532|dbj|BAK03159.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 426

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 86/284 (30%), Gaps = 9/284 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     R ++  +Y +      + D           
Sbjct: 131 LGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQA 190

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMI+    D       + 
Sbjct: 191 LDRWERRLEDLFA---GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNF 247

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        G+A  +  ++  +     
Sbjct: 248 DELYMYCYYVAGTVGLMSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDAR 307

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  +++    +K   +    +  +A + +  +     
Sbjct: 308 RGRIYLPQDELAEAGLSDEDIFKGVVTEKWRKFMKRQIKRARMFFTEAEQGVTELRKVSR 367

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            P +  + +   +L   + + +   +      +  +   +  + 
Sbjct: 368 WPVWASMLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAY 411


>gi|254526977|ref|ZP_05139029.1| phytoene synthase [Prochlorococcus marinus str. MIT 9202]
 gi|221538401|gb|EEE40854.1| phytoene synthase [Prochlorococcus marinus str. MIT 9202]
          Length = 302

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 105/303 (34%), Gaps = 17/303 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +       +      +  +      YL  LL P   R ++  +Y +      + D+   
Sbjct: 1   MKNSISQLDQAYEICRKETQQWAKTFYLGTLLLPKEKRKAIWAIYVWCRRTDEIMDSVEA 60

Query: 70  PITRDMR----LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W++  ++  KG I   +      LL  + +Y    Q +LDMI+   
Sbjct: 61  STKSKDELSDNLDEWEENTKNVFKGNIKSELDSV---LLDTIEKYPQSIQPYLDMIDGQR 117

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIA 176
            D       D  + + Y +R++  +  +   ++  +    +                GIA
Sbjct: 118 MDLNKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTTAPWSAMPDPSEAAIALGIA 177

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  ++  +    HRG++Y P + +       E  L G+ + +    +        ++ 
Sbjct: 178 NQLTNILRDVGEDRHRGRIYLPQEDIEKYNYSEEELLKGKINKQWKALMNFQLTRAREWF 237

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            K+ + ++++  D   P +  + +   +L   +   + + ++       V+   +  S +
Sbjct: 238 QKSEDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAFVKNSVKALEIPISFL 297

Query: 296 KKR 298
             R
Sbjct: 298 ISR 300


>gi|115480597|ref|NP_001063892.1| Os09g0555500 [Oryza sativa Japonica Group]
 gi|85720671|gb|ABC75828.1| phytoene synthase 3 [Oryza sativa Indica Group]
 gi|113632125|dbj|BAF25806.1| Os09g0555500 [Oryza sativa Japonica Group]
          Length = 402

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 89/286 (31%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +          ++     YLA  L  P  R ++  +Y +      + D         + 
Sbjct: 103 LNAAFDRCGEVCKEYAKTFYLATQLMTPERRRAIWAIYVWCRRTDELVDGPNASHMSALA 162

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   +                 L   V  + +  Q F DMIE    D         
Sbjct: 163 LDRWESRLDDIFA---GRPYDMLDAALSHTVATFPVDIQPFRDMIEGMRLDLTKSRYRSF 219

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  +   ++              +     G+A  +  ++  +     
Sbjct: 220 DELYLYCYYVAGTVGLMTVPVMGISPDSRANTETVYKGALALGLANQLTNILRDVGEDAR 279

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P+D L   GL  +    G+ +DR    ++        +  +A E    +  +  
Sbjct: 280 RGRIYLPMDELEMAGLSEDDIFDGRVTDRWRCFMRDQITRARAFFRQAEEGASELNQESR 339

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 340 WPVWASLLLYRQILDEIEANDYNNFTKRAYVPKAKKIVALPKAYYR 385


>gi|255083887|ref|XP_002508518.1| phytoene synthase [Micromonas sp. RCC299]
 gi|226523795|gb|ACO69776.1| phytoene synthase [Micromonas sp. RCC299]
          Length = 352

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 98/302 (32%), Gaps = 18/302 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R    +             +     YL   L  P  + ++  +Y +      + D    
Sbjct: 47  PRVPPAMLDAAYERCDEVTGEYAKTFYLGTKLMTPEKQRAIWAIYVWCRRTDELVDGPNA 106

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                  L  W++  E+  +             L   + ++ +  Q F DM++    D  
Sbjct: 107 SHITPEALDQWENRLEAIFE---GRPADIIDAALCDTLSRFPVDIQPFRDMVDGMRMDLV 163

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLIC 184
                   +   Y +R++  +  ++  I+  +       +   +     G+A  +  ++ 
Sbjct: 164 KPRYRTFDELYEYCYRVAGTVGLMSMPIMGCDENFEGDLTKVYKAALSLGLANQLTNILR 223

Query: 185 QLPIHYH-RGQLYFPLDILGAVGLDRESFLS--------GQNSDRISLAIKIFAELGLKY 235
            +      R ++Y PLD L   G+D    +         G+  DR    +K       + 
Sbjct: 224 DVGEDVQTRNRIYIPLDELAEFGIDESEIVRGGLYSPVTGKVDDRWKAFMKFQIARAREV 283

Query: 236 LFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             +A   +  +  D   P +  + +  ++L   + +G+   S      ++ +   + ++ 
Sbjct: 284 FAEAEAGVNCLHADARWPVWSALDVYRNILDAIEENGYDNFSQRAYVPKMKKLMMLPTAW 343

Query: 295 IK 296
            K
Sbjct: 344 QK 345


>gi|297746444|emb|CBI16500.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 88/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     + ++  +Y +      + D           
Sbjct: 3   LEEAYERCRNICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNAAYMSSAV 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W++                    L   + ++ L  + F DMIE    D+ N    + 
Sbjct: 63  LDRWEERLHDIFN---GRPYDMLDAALTDTIYKFPLDIKPFRDMIEGMRMDTKNFRYENF 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
           ++   Y + ++  +  ++  ++           +      Y GI   +  ++  +     
Sbjct: 120 QELYLYCYYVAGTVGLMSVPVMGIAPESPVSAQSIYNSALYLGIGNQLTNILRDVGEDSL 179

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL      S + +D     +K        Y  +A E    +     
Sbjct: 180 RGRVYLPQDELAQFGLCDRDIFSRKVNDGWREFMKQQITRARFYFNQAEEGASQLDKASR 239

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +  ++      +  +   +  +  +
Sbjct: 240 WPVWSSLLLYRKILDAIEENDYDNLTKRAYVGRTKKLLTLPLAYSR 285


>gi|33239618|ref|NP_874560.1| squalene and phytoene synthase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33237143|gb|AAP99212.1| Phytoene synthase, CrtB [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 303

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 101/294 (34%), Gaps = 17/294 (5%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                     +         YL  LL PP  R ++  +Y +      + D+         
Sbjct: 8   NLDGAYEICRKETAQWAKTFYLGTLLLPPHKRKAIWAIYVWCRRTDELMDSKEAQQCSKT 67

Query: 76  ----RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
               RL  W+       KG + + +     +    +  +    Q +LDMIE    D    
Sbjct: 68  ELADRLDQWELRTRGIFKGNVQDELDGVMAD---TIENFPQSIQPYLDMIEGQRMDLEKT 124

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQL 182
                ++ + Y +R++  +  +   ++  +    +    +           GIA  +  +
Sbjct: 125 RYSTFEELKLYCYRVAGTVGLMTQNVMGIDPAYTNAPWSEQPDPSQAAVALGIANQLTNI 184

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           +  +     RG++Y P + L   G   E  + G+ + +    +    +    +   + E 
Sbjct: 185 LRDVGEDRTRGRIYLPQEDLKKFGYSEEDLMQGEINPQWKELMAFQLKRARDWFDISEEG 244

Query: 243 MRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           ++++  D   P +  + +   +L   +   + + ++    N+ V+   +  S +
Sbjct: 245 VKWLSADARWPVWTSLRLYRGILNSIERLDYDVFNNRAYVNKFVKMLELPISYL 298


>gi|134094962|ref|YP_001100037.1| putative phytoene synthase [Herminiimonas arsenicoxydans]
 gi|133738865|emb|CAL61912.1| Putative phytoene synthase CrtB-like [Herminiimonas arsenicoxydans]
          Length = 277

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 101/277 (36%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y + L  P   R +++ LY F  E+    D   +      +L WW+
Sbjct: 5   DYCQQKAAQSGSSFYYSFLFLPAERRRAITALYAFCREVDDTVDDCTDVSIARTKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                    +      P +  L   +  + L NQ+ L +I+    D       D    + 
Sbjct: 65  QEV---AAMMAGAPTHPVTKALQPHLTSFALDNQHLLSIIDGMEMDLDQTRYLDFPGLQK 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y + ++S +  L+  I         L+  +  G+A  +  +I  +     +G++Y P++ 
Sbjct: 122 YCWHVASVVGILSANIFGVTNPQT-LQYAEKLGLAFQLTNIIRDVGEDARKGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ ++SD     ++  A    K   +A   +         P  I  +I 
Sbjct: 181 LQQFNVTAADILNARHSDNFEKLMQFQAARAQKMYDEAFALLPKEDRRAQRPGLIMAAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +  GF +++   +   + + W    + ++ 
Sbjct: 241 RAVLNEVERDGFHVLTQRISLTPIRKLWLAWITYVRG 277


>gi|237748479|ref|ZP_04578959.1| phytoene synthase [Oxalobacter formigenes OXCC13]
 gi|229379841|gb|EEO29932.1| phytoene synthase [Oxalobacter formigenes OXCC13]
          Length = 278

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 88/276 (31%), Gaps = 6/276 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWW 80
            +  +         Y++    P   R +++ LY F  E+  + D    +      +L  W
Sbjct: 5   EYCQQKAAASGSSFYVSFRFLPADRRKAITALYAFCREVDDIVDDQTMDAAQARFKLDGW 64

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +                  +  L   +  ++L     L +I+    D            +
Sbjct: 65  RKEIAEMEA---GRPDHLITQALFPHLEAFNLDVNLLLAIIDGMEMDLDKVRYESFDDLK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y + ++S +  LA  I             +  G+A  +  +I  +      G++Y P D
Sbjct: 122 KYCWHVASAVGILAARIFGLTNPQTGE-YAEKLGLAFQLTNIIRDVGEDIKIGRIYLPAD 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSI 259
            L   G+  +     + +   S  +   A+  L    +A   +         P  +  SI
Sbjct: 181 ELKEFGVTEDDLEKARYTPEFSELMDFQAKRALSLYDEAFALLPEEDRQSQRPGLMMASI 240

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              +L   +   F +++   +  +  + W    + +
Sbjct: 241 YRELLLQIKKKDFPVLTEHVSLTKTKKLWLAWKAYV 276


>gi|167860180|ref|NP_001108125.1| phytoene synthase3 [Zea mays]
 gi|85720669|gb|ABC75827.1| phytoene synthase 3 [Zea mays]
          Length = 426

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 90/286 (31%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                       R+     YLA  L  P  RI++  +Y +      + D         + 
Sbjct: 123 LKAAFHRCGEVCREYAKTFYLATQLMTPERRIAIWAIYVWCRRTDELVDGPNASHISALA 182

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   V ++ +  Q F DMIE    D         
Sbjct: 183 LDRWESRLEDIFA---GRPYDMLDAALSDTVARFPVDIQPFRDMIEGMRMDLKKSRYRSF 239

Query: 137 KQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++              +     G+A  +  ++  +     
Sbjct: 240 DELYLYCYYVAGTVGLMSVPVMGISPASRAATETVYKGALALGLANQLTNILRDVGEDAR 299

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL     L G+ +D     ++        +  +A E    +  +  
Sbjct: 300 RGRIYLPQDELEMAGLSDADVLDGRVTDEWRGFMRGQIARARAFFRQAEEGATELNQESR 359

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  + ++
Sbjct: 360 WPVWSSLLLYRQILDEIEANDYDNFTRRAYVPKTKKLMALPKAYLR 405


>gi|157412499|ref|YP_001483365.1| squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9215]
 gi|157387074|gb|ABV49779.1| Squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9215]
          Length = 302

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 105/303 (34%), Gaps = 17/303 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +       +      +  +      YL  LL P   R ++  +Y +      + D+   
Sbjct: 1   MKNSISQLDQAYEICRKETQQWAKTFYLGTLLLPQEKRRAIWAIYVWCRRTDEIMDSVEA 60

Query: 70  PITRDMR----LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W++  ++  KG I   +      LL  + +Y    Q +LDMI+   
Sbjct: 61  STKSKDELSDNLDEWEENTKNVFKGNIKSELDSV---LLDTIEKYPQSIQPYLDMIDGQR 117

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIA 176
            D       D  + + Y +R++  +  +   ++  +    +                GIA
Sbjct: 118 MDLNKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTTAPWSAMPDPSEAAIALGIA 177

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  ++  +    HRG++Y P + +       E  L G+ + +    +        ++ 
Sbjct: 178 NQLTNILRDVGEDRHRGRIYLPQEDIEKYNYSEEELLKGKINKQWKALMNFQLTRAREWF 237

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            K+ + ++++  D   P +  + +   +L   +   + + ++       V+   +  S +
Sbjct: 238 QKSEDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAFVKNSVKALEIPISFL 297

Query: 296 KKR 298
             R
Sbjct: 298 ISR 300


>gi|209572583|gb|ACI62767.1| chloroplast phytoene synthase 3 precursor [Oryza sativa Japonica
           Group]
          Length = 444

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 89/286 (31%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +          ++     YLA  L  P  R ++  +Y +      + D         + 
Sbjct: 145 LNAAFDRCGEVCKEYAKTFYLATQLMTPERRRAIWAIYVWCRRTDELVDGPNASHMSALA 204

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   +                 L   V  + +  Q F DMIE    D         
Sbjct: 205 LDRWESRLDDIFA---GRPYDMLDAALSHTVATFPVDIQPFRDMIEGMRLDLTKSRYRSF 261

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  +   ++              +     G+A  +  ++  +     
Sbjct: 262 DELYLYCYYVAGTVGLMTVPVMGISPDSRANTETVYKGALALGLANQLTNILRDVGEDAR 321

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P+D L   GL  +    G+ +DR    ++        +  +A E    +  +  
Sbjct: 322 RGRIYLPMDELEMAGLSEDDIFDGRVTDRWRCFMRDQITRARAFFRQAEEGASELNQESR 381

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 382 WPVWASLLLYRQILDEIEANDYNNFTKRAYVPKAKKIVALPKAYYR 427


>gi|225435712|ref|XP_002283501.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 419

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 88/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     + ++  +Y +      + D           
Sbjct: 90  LEEAYERCRNICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNAAYMSSAV 149

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W++                    L   + ++ L  + F DMIE    D+ N    + 
Sbjct: 150 LDRWEERLHDIFN---GRPYDMLDAALTDTIYKFPLDIKPFRDMIEGMRMDTKNFRYENF 206

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
           ++   Y + ++  +  ++  ++           +      Y GI   +  ++  +     
Sbjct: 207 QELYLYCYYVAGTVGLMSVPVMGIAPESPVSAQSIYNSALYLGIGNQLTNILRDVGEDSL 266

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL      S + +D     +K        Y  +A E    +     
Sbjct: 267 RGRVYLPQDELAQFGLCDRDIFSRKVNDGWREFMKQQITRARFYFNQAEEGASQLDKASR 326

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +  ++      +  +   +  +  +
Sbjct: 327 WPVWSSLLLYRKILDAIEENDYDNLTKRAYVGRTKKLLTLPLAYSR 372


>gi|87045557|gb|ABD17618.1| phytoene synthase 3 [Zea mays]
          Length = 426

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 90/286 (31%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                       R+     YLA  L  P  R+++  +Y +      + D         + 
Sbjct: 123 LKAAFHRCGEVCREYAKTFYLATQLMTPERRMAIWAIYVWCRRTDELVDGPNASHISALA 182

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   V ++ +  Q F DMIE    D         
Sbjct: 183 LDRWESRLEDIFA---GRPYDMLDAALSDTVARFPVDIQPFRDMIEGMRMDLKKSRYRSF 239

Query: 137 KQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++              +     G+A  +  ++  +     
Sbjct: 240 DELYLYCYYVAGTVGLMSVPVMGISPASRAATETVYKGALALGLANQLTNILRDVGEDAR 299

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL     L G+ +D     ++        +  +A E    +  +  
Sbjct: 300 RGRIYLPQDELEMAGLSDADVLDGRVTDEWRGFMRGQIARARAFFRQAEEGATELNQESR 359

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  + ++
Sbjct: 360 WPVWSSLLLYRQILDEIEANDYDNFTRRAYVPKTKKLMALPKAYLR 405


>gi|34498433|ref|NP_902648.1| geranylgeranyl-diphosphate geranylgeranyltransferase
           [Chromobacterium violaceum ATCC 12472]
 gi|34104287|gb|AAQ60646.1| probable geranylgeranyl-diphosphate geranylgeranyltransferase
           [Chromobacterium violaceum ATCC 12472]
          Length = 286

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 92/275 (33%), Gaps = 6/275 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y +    P   R +++ LY F  E+    D   +      +L WW+
Sbjct: 10  QYCEDKAAASGSSFYYSFRFLPEERRRAITALYAFCREVDDAVDECHDLNVAQAKLAWWR 69

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              + + +    E+  P    LL  +  + LP     ++++    D         +    
Sbjct: 70  GQVQRAYR---GEADHPVMRALLPHLEAFQLPQSELEEIVDGMEMDLSMVRYQRFQDLLL 126

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  R++  +  LA  I        +L      GIA  +  +I  +     R ++Y P++ 
Sbjct: 127 YCHRVAGVVGKLAARIFGYSD-ERTLEYAHELGIAFQLTNIIRDVGEDARRDRIYLPMEE 185

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L          L  + S+     +    E   ++  KA E +         P  +  +I 
Sbjct: 186 LQRFNCPAMDILHYEESEAFKALMAFQIERAHQHYRKAWELLPAADRKSQRPGLLMAAIY 245

Query: 261 ESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSS 294
            + L+     G  K+++   +   + + W    + 
Sbjct: 246 RATLEEISLDGPAKVLNQRLSLTPVRKLWLAWKTW 280


>gi|242050132|ref|XP_002462810.1| hypothetical protein SORBIDRAFT_02g032370 [Sorghum bicolor]
 gi|56785585|gb|AAW28997.1| chloroplast phytoene synthase 3 [Sorghum bicolor]
 gi|241926187|gb|EER99331.1| hypothetical protein SORBIDRAFT_02g032370 [Sorghum bicolor]
          Length = 441

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 88/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                       ++     YLA  L  P  R ++  +Y +      + D         + 
Sbjct: 139 LKAAFHRCGEVCQEYAKTFYLATQLMTPERRRAIWAIYVWCRRTDELVDGPNASHISAVA 198

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   V  + +  Q F DMIE    D         
Sbjct: 199 LDRWESRLEDIFA---GRPYDMLDAALSDTVANFPVDIQPFRDMIEGMRMDLKKSRYRSF 255

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++              +     G+A  +  ++  +     
Sbjct: 256 DELYLYCYYVAGTVGLMSVPVMGISPDSRAATETVYKGALALGLANQLTNILRDVGEDAR 315

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL     L G+ +D     ++        +  +A E    +  +  
Sbjct: 316 RGRIYLPQDELEMAGLSDADILDGRVTDEWRSFMRGQITRARAFFRQAEEGATELNQESR 375

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  + ++
Sbjct: 376 WPVWASLLLYRQILDEIEANDYNNFTRRAYVPKTKKLMALPKAYLR 421


>gi|302143517|emb|CBI22078.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 93/286 (32%), Gaps = 9/286 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 5   DLLNGAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHMSP 64

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+       +         +   L   V +Y +  Q F DMIE    D       
Sbjct: 65  KALDRWEQRLIDLFE---GHPYDMYDAALSDTVAKYPVDVQPFKDMIEGMRLDLRKSRYN 121

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIH 189
              +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 122 SFDELYLYCYYVAGTVGLMSVPVMGISPDSKASTESVYNAALALGIANQLTNILRDVGED 181

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +  L G+ +D+    +K   +    +  +A + +R +   
Sbjct: 182 ARRGRIYLPQDELERAGLSDDDILRGKVTDKWRSFMKGQIKRARMFFDEAEKGVRELNSA 241

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
              P +  + +   +L   + + +   +      +L +   +  + 
Sbjct: 242 SRWPVWASLMLYRQILDAIEANDYNNFTKRAYVGKLKKLVSLPIAY 287


>gi|242084306|ref|XP_002442578.1| hypothetical protein SORBIDRAFT_08g022310 [Sorghum bicolor]
 gi|241943271|gb|EES16416.1| hypothetical protein SORBIDRAFT_08g022310 [Sorghum bicolor]
          Length = 397

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 91/287 (31%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL   L  P  R ++  +Y +      + D          
Sbjct: 109 LLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPT 168

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E   +         +   L   V ++ +  Q F DMIE    D +      
Sbjct: 169 ALDRWEKRLEDLFE---GRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYMT 225

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  +   ++           +        GIA  +  ++  +    
Sbjct: 226 FDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDA 285

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y PLD L   GL  E    G+ +D+    +K   +    +  +A + + ++    
Sbjct: 286 RRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQIQRARLFFDEAEKGVAHLDSAS 345

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +      +  +   +  +  +
Sbjct: 346 RWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKKLLSLPVAYAR 392


>gi|189347080|ref|YP_001943609.1| Squalene/phytoene synthase [Chlorobium limicola DSM 245]
 gi|189341227|gb|ACD90630.1| Squalene/phytoene synthase [Chlorobium limicola DSM 245]
          Length = 309

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 102/297 (34%), Gaps = 12/297 (4%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
           +++         +  +  +      YLA L  P   +  +  +Y     +  + D A + 
Sbjct: 14  KEKALTLENAYRYCRQISKHHAKTFYLATLFLPKRQQNPIFAIYALLRTVDDLVDLAEDK 73

Query: 71  ITRDM--------RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           +T            L+ WK   +   +G +  S  P  +     ++ Y +P +  LD+++
Sbjct: 74  LTNGQITRQEINSLLENWKIRLKQCYRGEV--SRDPIMMAWHDTLKTYPIPIELPLDLMD 131

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQL 182
               D              Y ++++S +  + + I       A    I   GIA  +  +
Sbjct: 132 GVAMDIEFKKFETFDDLYVYCYKVASVVGLMTSEIFGYSDRQALQHAID-LGIAMQLTNI 190

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           +  +     RG++Y P++ L   G   E F+    +      +K   E    Y   + + 
Sbjct: 191 LRDIGEDIDRGRIYLPMEDLKRFGYSEEEFMKKTMNHNFLAMMKFQIERARSYYRSSEKG 250

Query: 243 MRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  +  +      I      ++L+  + + + + S     +   +   +     K R
Sbjct: 251 IPMLEKESRFAVMISSRNYCNILQAIEENNYDVFSRRAYRSFYQKIRTIPEIWYKTR 307


>gi|123967697|ref|YP_001008555.1| squalene and phytoene synthase [Prochlorococcus marinus str.
           AS9601]
 gi|123197807|gb|ABM69448.1| Squalene and phytoene synthases [Prochlorococcus marinus str.
           AS9601]
          Length = 302

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 104/303 (34%), Gaps = 17/303 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +       +      +  +      YL  LL P   R ++  +Y +      + D+   
Sbjct: 1   MKNSISQLDQAYEICRKETQKWAKTFYLGTLLLPVEKRKAIWAIYVWCRRTDEIMDSLEA 60

Query: 70  PITRDMRLQ----WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                  L      W++  ++  KG I   +      LL  + +Y    Q +LDMI+   
Sbjct: 61  STKSQDELAENLNEWEENTKNVFKGNIKSELDAV---LLDTIEKYPQSIQPYLDMIDGQR 117

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIA 176
            D       D  + + Y +R++  +  +   ++  +    S                GIA
Sbjct: 118 MDLNKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTSAPWSAKPDPSEAAIALGIA 177

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  ++  +     RG++Y P + +       E  L G+ + +    +         + 
Sbjct: 178 NQLTNILRDVGEDRQRGRIYLPQEDIEKFNYSEEKLLKGEINKQWKALMNFQLNRARDWF 237

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            K+ + ++++  D   P +  + +   +L   +   + + ++       V+ + +  S +
Sbjct: 238 QKSEDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAYVKNSVKAFEIPISFL 297

Query: 296 KKR 298
             R
Sbjct: 298 ISR 300


>gi|78778531|ref|YP_396643.1| squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9312]
 gi|78712030|gb|ABB49207.1| phytoene synthase [Prochlorococcus marinus str. MIT 9312]
          Length = 302

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 106/303 (34%), Gaps = 17/303 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +       +      +  +      YL  LL P   R ++  +Y +      + D+   
Sbjct: 1   MKNSISQLDQAYEICRKETQQWAKTFYLGTLLLPVEKRKAIWAIYVWCRRTDEIMDSLEA 60

Query: 70  PITRDMR----LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W++  ++  KG I   +      LL  + +Y    Q +LDMIE   
Sbjct: 61  STKSQDELSDNLDAWEENTKNVFKGNIKSELDSV---LLDTIEKYPQSIQPYLDMIEGQR 117

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIA 176
            D       D  + + Y +R++  +  +   ++  ++   S                GIA
Sbjct: 118 MDLNKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDKAYTSAPWSSKPDPSEAAIALGIA 177

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  ++  +     RG++Y P   +       E  L+G+ + +    +K        + 
Sbjct: 178 NQLTNILRDVGEDRERGRIYLPQADIEKFNYSEEKLLNGEINKQWKALMKFQLSRARDWF 237

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            K+ E ++++  D   P +  + +   +L   +   + + ++       V+ + +  S +
Sbjct: 238 HKSEEGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAFVKNSVKAFEIPISFL 297

Query: 296 KKR 298
             R
Sbjct: 298 ISR 300


>gi|159899222|ref|YP_001545469.1| squalene/phytoene synthase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892261|gb|ABX05341.1| Squalene/phytoene synthase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 324

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 100/291 (34%), Gaps = 10/291 (3%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR 68
           + +   +  +                 Y +  L P   R ++  LY F      + D   
Sbjct: 29  SHQPSNQWLNHAYAHCTELTNVHSKSFYFSTQLLPARKRDAIRVLYAFCRTSDDLVDMH- 87

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            P T   RLQ W     S+ +        P  +    +   + + ++   +++     D 
Sbjct: 88  -PETAPERLQQWLKTLRSTPRH-----DDPVPLAWHHVRNHFRISSKLESELLAGVEMDL 141

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
             +          Y +R++S +  L+  ++     +    +    G+A  +  ++  +  
Sbjct: 142 SINRYATFADLWLYCYRVASVVGLLSMQVIGYAAGAVPYAIK--LGVALQLTNILRDIGE 199

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              R ++Y P + L   G+  +  L+G  S ++   ++   +   +   ++ + +  + P
Sbjct: 200 DARRNRIYLPKEDLERFGVSEQDILNGVRSPQMQQLLQFEMQRAHQLYDESWQGIGLLHP 259

Query: 249 DVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           D   A     ++   +L     + + + +   + +   +  Y+     + R
Sbjct: 260 DSRFAVATAATVYRGILDQIVRNNYDVFNRRASLSLGAKLAYLPKILWRLR 310


>gi|255572256|ref|XP_002527067.1| Phytoene synthase, chloroplast precursor, putative [Ricinus
           communis]
 gi|223533572|gb|EEF35311.1| Phytoene synthase, chloroplast precursor, putative [Ricinus
           communis]
          Length = 385

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 93/286 (32%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL     + ++  +Y +      + D           
Sbjct: 91  LEEAYARCKNICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNAGYMSSAV 150

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W++  ++       +        L   V ++ L  + F+DMIE    D+      D 
Sbjct: 151 LDRWEERLQNIFD---GQPYDMLDAALTDTVFRFPLDIKPFMDMIEGMRMDTKKCRYEDF 207

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-----AGIAQFIGQLICQLPIHYH 191
           ++   Y + ++  +  ++  ++     +       Y      GI   +  ++  +     
Sbjct: 208 EELYRYCYYVAGTVGLMSVPVMGIAPEACVSAQTIYSAALNLGIGNQLTNILRDVGEDAM 267

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G+ +DR    +K        Y   A E    +     
Sbjct: 268 RGRVYLPQDELAQFGLRDEDVFGGKVTDRWREFMKEQITRARYYFNLAEEGASQLDKASR 327

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   +++ +  ++      +  +   +  +  K
Sbjct: 328 WPVWSCLILYREILDAIEDNDYDNLTKRAYVGRTKKLLTLPLAYTK 373


>gi|86605038|ref|YP_473801.1| phytoene synthase [Synechococcus sp. JA-3-3Ab]
 gi|86553580|gb|ABC98538.1| phytoene synthase [Synechococcus sp. JA-3-3Ab]
          Length = 311

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 93/295 (31%), Gaps = 10/295 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA----R 68
                 +      +         YL  LL P   R ++  +Y +  +   + D       
Sbjct: 16  PMSPLEQSFALCRQITAKHAKTFYLGSLLLPRPKRRAIWAIYAWLRQTDELLDGLEASQA 75

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                  +L+ W    ES  +    E   P  + L+  +R Y L  + F +M+     D 
Sbjct: 76  EVEVTRSKLEQWGSHLESLFQ--GGEPQVPTDLALIHTIRTYRLSIEPFREMLRGQSMDL 133

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                   ++   Y +R++  +  + + I+               GIA  +  ++  +  
Sbjct: 134 DIRRYATWEELRVYCYRVAGVVGLMCSEIMGFVPGRDGREEAVALGIAMQLTNILRDVGE 193

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              RG++Y PL+ L           +    +R    +        +   +A   +  + P
Sbjct: 194 DARRGRIYLPLEDLRRFNYSERDLFNYVIDERWMALMDYEIRRARELYAQAERGIPTLQP 253

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPW---YMLSSSIKKRF 299
           D   P    + +   +L   + + +++       + L +          S +  +
Sbjct: 254 DSRWPVAASLMLYRQILNAIERNHYQVFRTRAYVSTLSKALALPVAWWRSWRSNY 308


>gi|33860703|ref|NP_892264.1| squalene and phytoene synthase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33633645|emb|CAE18602.1| Squalene and phytoene synthases [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 302

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 103/303 (33%), Gaps = 17/303 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +      ++      +  +      YL  LL P   R ++  +Y +      + D+   
Sbjct: 1   MKNSLSQLNKAYEICQKETQKWAKTFYLGTLLLPYEKRKAIWAIYVWCRRTDEIMDSIEA 60

Query: 70  PITRDMR----LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W++   +  KG I   +      L   + ++    + +LDMIE   
Sbjct: 61  STKTTEELSDNLNEWEENTRNVFKGKIQTELDAV---LFDTIEKFPQNIEPYLDMIEGQR 117

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIA 176
            D          + + Y +R++  +  +   ++  +    S                GIA
Sbjct: 118 MDLEKFRYKSFSELQLYCYRVAGTVGLMTQNVMGIDSAYTSAPWSNMPDSSESAIALGIA 177

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  ++  +     RG++Y P D +       E  L G  +++  + +         + 
Sbjct: 178 NQLTNILRDVGEDRQRGRIYLPQDDMNKFNYSEEELLKGVINNQWKMLMNFQLIRARDWF 237

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            K+ + ++++  D   P +  + +   +L   +   + + ++       V+ + +  S +
Sbjct: 238 KKSEDGIKWLSADARWPVWTSLRLYRGILDSIERLDYDVFNNRAYVKNSVKAFEIPISYL 297

Query: 296 KKR 298
             R
Sbjct: 298 ISR 300


>gi|76443556|dbj|BAE45297.1| phytoene synthase [Gentiana lutea]
          Length = 425

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 93/288 (32%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +      L   L  P  R+++  +Y +      + D         
Sbjct: 133 NVLNEAYDRCREVCAEYAKSFLLGNQLMTPERRLAIWAIYVWCRRTDELVDGLNASNINP 192

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   K    +        L   + +Y +  Q F DMIE    D       
Sbjct: 193 TALDRWEARLEDVFK---GQPFDMLDAALSDTITKYPVDIQPFRDMIEGMRMDLKKSRYK 249

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 250 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALSLGIANQLTNILRDVGED 309

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+   A +    +   
Sbjct: 310 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIKRARKFYDDAEKRSPELSSA 369

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  +     +L   + + +   +     N+  +   M  +  K
Sbjct: 370 SRLPVWAALLFYRKILDEIEANDYNNFTKRAYVNKAKKLLAMPVACAK 417


>gi|226940962|ref|YP_002796036.1| geranylgeranyl-diphosphate geranylgeranyltransferase [Laribacter
           hongkongensis HLHK9]
 gi|226715889|gb|ACO75027.1| Probable geranylgeranyl-diphosphate geranylgeranyltransferase
           [Laribacter hongkongensis HLHK9]
          Length = 283

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 95/275 (34%), Gaps = 6/275 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y +    PP  R +++ LY F  E+  V D  R+P      L WW+
Sbjct: 5   EYCENKAAASGSSFYSSFRFLPPEQRRAITALYAFCREVDDVVDETRDPALARRTLDWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       ++  P    L   V  +DLP+    ++I+    D         K  + 
Sbjct: 65  AELAALYA---GQATHPVLCALAPHVSAFDLPHNLLAEIIDGMEMDLDQSFYLTFKDLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R++  +  L+ +I   +            GIA  +  +I  +     RG++Y P + 
Sbjct: 122 YCYRVAGVVGQLSALIFGFDDKRTF-HYAHDLGIAFQLTNIIRDVGEDARRGRVYLPQED 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSIT 260
           L   G+     L+ + S      ++   +    +  +A   +  +         +  +I 
Sbjct: 181 LVRFGVPLGDVLAYRESPAFEALMRFQIDRAQHFYDQALRTLPAVDARRQRVGLVMAAIY 240

Query: 261 ESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSS 294
            ++L      G  + ++   +     + W    + 
Sbjct: 241 RALLDEIALDGPARTLNQKLSLPARRKVWLAWKTW 275


>gi|126695500|ref|YP_001090386.1| squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9301]
 gi|126542543|gb|ABO16785.1| Squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9301]
          Length = 302

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 103/303 (33%), Gaps = 17/303 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +       +      +  +      YL  LL P   R ++  +Y +      + D+   
Sbjct: 1   MKNSISQLDQAYEICRKETQKWAKTFYLGTLLLPVEKRKAIWAIYVWCRRTDEIMDSLEA 60

Query: 70  PITRDMR----LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W++   +  KG I   +      LL  + +Y    Q +LDMI+   
Sbjct: 61  STKSQDELTENLNAWEENTRNVFKGNIKSELDAV---LLDTIEKYPQSIQPYLDMIDGQR 117

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIA 176
            D       D  + + Y +R++  +  +   ++  +    S                GIA
Sbjct: 118 MDLNKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTSAPWSAKPDPSEAAIALGIA 177

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  ++  +     RG++Y P + +       E  L G+ + +    +         + 
Sbjct: 178 NQLTNILRDVGEDRQRGRIYLPQEDIEKFNYSEEKLLKGEINKQWKALMNFQLTRARDWF 237

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            K+ + ++++  D   P +  + +   +L   +   + + ++       V+ + +  S +
Sbjct: 238 QKSEDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAFVKNSVKAFEIPISFL 297

Query: 296 KKR 298
             R
Sbjct: 298 ISR 300


>gi|66735124|gb|AAY53806.1| phytoene synthase [Haematococcus pluvialis]
          Length = 400

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 94/303 (31%), Gaps = 17/303 (5%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           + +R              +   +     YL   L  P+   S+  +Y +      + D  
Sbjct: 93  QASRWTPATLEEAYQRCGQVTSEFAKTFYLGTQLMTPIQAKSIWAIYVWCRRTDELVDGP 152

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
                    L  W++  E++         +     L   + ++ +  Q F DMIE    D
Sbjct: 153 NANKITPKALDRWEERLEATFA---GRPYNVLDAALSDTISKFPMDIQPFKDMIEGMRMD 209

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQL 182
            +        +   Y +R++  +  +   ++              +     G A  +  +
Sbjct: 210 LHKTRYQTFDELYEYCYRVAGTVGLMTMPVMGIDPSYKGPMDVVYKAALALGTANQLTNI 269

Query: 183 ICQLPIHYH-RGQLYFPLDILGAVGLDRESFL-------SGQNSDRISLAIKIFAELGLK 234
           +  +      R ++Y P++ L   GL  +  L        G+ S++    +K       +
Sbjct: 270 LRDVGEDARERNRIYLPMEDLQQFGLTEQDVLGAVHVPSQGKVSEKWRAFMKFQIARARQ 329

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               A   +  +      P +  + +   +L   + + +   S     ++  +   +  +
Sbjct: 330 CFADAESGVDQLEAKARWPVWSALILYRQILDAIEKNDYDNFSQRAYVSKAKKMASLPLA 389

Query: 294 SIK 296
             +
Sbjct: 390 LTR 392


>gi|73541065|ref|YP_295585.1| squalene/phytoene synthase [Ralstonia eutropha JMP134]
 gi|72118478|gb|AAZ60741.1| Squalene/phytoene synthase [Ralstonia eutropha JMP134]
          Length = 302

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 99/277 (35%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +    +       Y + L  P   R +++ LY +  E+  V D A +P     +L WW+
Sbjct: 29  QYCQEKVAQSGSSFYYSFLFLPAERRRAITALYAWCREVDDVVDDAHDPALAHQQLDWWR 88

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                  +    E   P +  L   V+   LP+    ++++    D       D      
Sbjct: 89  GELRHLFE---GEPTHPVTQALRPHVKAAGLPHAEMSEVLDGMEMDLTQSRYLDEIGLNR 145

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  L+  +         L   +  G++  +  ++  +     RG++Y P+D 
Sbjct: 146 YCHCVAGVVGTLSARLFGYSDPHT-LVFAEKLGLSLQLVNILRDVGEDARRGRIYLPVDT 204

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L G++S+R    ++  A        +A + +            +  +I 
Sbjct: 205 LQRFQVPASEILQGKHSERFVALMQYHAGRARALYREALDLLPRQDRRAQRAGLLMGAIY 264

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   F++++       L + W    + ++ 
Sbjct: 265 HALLDEIERSDFQVLNQRIALTPLRKLWIAWKTWVRN 301


>gi|76443560|dbj|BAE45299.1| phytoene synthase [Gentiana lutea]
          Length = 429

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 94/289 (32%), Gaps = 10/289 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     Y    L  P  R+++  +Y +      + D         
Sbjct: 132 NVLNEAYDRCREVCAEYAKSFYWGTQLMTPERRLAIWAIYVWCRRTDELVDGPNASHINP 191

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   K    +        L   + +Y +  Q F DMIE    D       
Sbjct: 192 TALDRWEARLEDVFK---GQPFDMLDAALSDTITKYPVDIQPFRDMIEGMRMDLKKSRYK 248

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 249 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALSLGIANQLTNILRDVGED 308

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+   A + +  +   
Sbjct: 309 ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIKRARKFYDDAEKGVPELSSA 368

Query: 250 VFPAFIPVSI--TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              A +   +     +L   + + +   +     N+  +   M  +  K
Sbjct: 369 KQIACVGQRLLFYRKILDEIEANDYNNFTKRAYVNKAKKLLAMPVACAK 417


>gi|264665574|gb|ACY70864.1| phytoene synthase [Coix lacryma-jobi]
          Length = 397

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 81/271 (29%), Gaps = 9/271 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLFA---GRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVNELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            P +  + +   +L   + + +   +     
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYV 382


>gi|56782941|gb|AAW28851.1| phytoene synthase [Haematococcus pluvialis]
          Length = 400

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           + +R              +   +     YL   L  P+   S+  +Y +      + D  
Sbjct: 93  QASRWTPATLEEAYQRCGQVTSEFAKTFYLGTQLMTPIQAKSIWAIYVWCRRTDELVDGP 152

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
                    L  W++  E++               L   + ++ +  Q F DMIE    D
Sbjct: 153 NANKITPKALDRWEERLEATFA---GRPYDVLDAALSDTISKFPMDIQPFKDMIEGMRMD 209

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQL 182
            +        +   Y +R++  +  +   ++              +     G A  +  +
Sbjct: 210 LHKTRYQTFDELYEYCYRVAGTVGLMTMPVMGIDPSYKGPMDVVYKAALALGTANQLTNI 269

Query: 183 ICQLPIHYH-RGQLYFPLDILGAVGLDRESFL-------SGQNSDRISLAIKIFAELGLK 234
           +  +      R ++Y P++ L   GL  +  L        G+ S++    +K       +
Sbjct: 270 LRDVGEDARERNRIYLPMEDLQQFGLTEQDVLGAVHVPSQGKVSEKWRAFMKFQIARARQ 329

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               A   +  +      P +  + +   +L   + + +   S     ++  +   +  +
Sbjct: 330 CFADAESGVDQLEAKARWPVWSALILYRQILDAIEKNDYDNFSQRAYVSKAKKMASLPLA 389

Query: 294 SIK 296
             +
Sbjct: 390 LTR 392


>gi|264665570|gb|ACY70862.1| phytoene synthase [Coix lacryma-jobi]
          Length = 397

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 81/271 (29%), Gaps = 9/271 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLFA---GRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            P +  + +   +L   + + +   +     
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYV 382


>gi|264665568|gb|ACY70861.1| phytoene synthase [Coix lacryma-jobi]
          Length = 398

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 81/271 (29%), Gaps = 9/271 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 116 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 175

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 176 LDRWEKRLEDLFA---GRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYNNF 232

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 233 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 292

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 293 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 352

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            P +  + +   +L   + + +   +     
Sbjct: 353 WPVWASLLLYRQILDEIEANDYNNFTKRAYV 383


>gi|124024928|ref|YP_001014044.1| squalene and phytoene synthase [Prochlorococcus marinus str.
           NATL1A]
 gi|123959996|gb|ABM74779.1| Squalene and phytoene synthases [Prochlorococcus marinus str.
           NATL1A]
          Length = 312

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 101/298 (33%), Gaps = 17/298 (5%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           +             +         YL  +L PP  R ++  +Y +      + D+     
Sbjct: 3   QPYLNLEDAYEACRKETAQWAKTFYLGTMLLPPAKRRAIWAIYVWCRRTDELMDSTEAQK 62

Query: 72  TRD----MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
                   RL  W+D  ++   G   + +      L   ++++    Q ++DMIE    D
Sbjct: 63  KSRNELSDRLNQWEDKTKNIFAGNTQDDLDAV---LADTLQKFPQSIQPYIDMIEGQRMD 119

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE---------RYSASLRVIKYAGIAQF 178
                    ++ E Y +R++  +  +   ++  +             + R     GIA  
Sbjct: 120 LDKTRYKTFEELELYCYRVAGTVGLMTQGVIGIDAAYTRNPNLPPPDTSRAAIALGIANQ 179

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           +  ++  +     RG++Y PL+ L       E    G  ++     +         +  K
Sbjct: 180 LTNILRDVGEDRGRGRIYLPLEDLKKFNYSEEDLFKGTINENWKALMAFQLARARDWFQK 239

Query: 239 AREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           + E ++++  D   P +  + +   +L   +   + + S+       V+   +  S +
Sbjct: 240 SEEGIKWLSIDARWPIWTSLRLYSGILNSIEKIDYDVFSNRAYVKGWVKAVNLPISYL 297


>gi|148656243|ref|YP_001276448.1| squalene/phytoene synthase [Roseiflexus sp. RS-1]
 gi|148568353|gb|ABQ90498.1| Squalene/phytoene synthase [Roseiflexus sp. RS-1]
          Length = 337

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 91/281 (32%), Gaps = 9/281 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                   +   R      YL+  L P   R+++  LY F        D A +   R   
Sbjct: 56  LDAAYRQCVEITRINSRSFYLSSQLLPFEKRLAVRALYAFCRTSDDTVDRATDDPAR--A 113

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W     +        +  P  +     VR+Y +P     +++     D         
Sbjct: 114 LAQWVARVHAPH----PPADHPVLLAWDDTVRRYAIPQSLVDELLAGIAMDLTFHRYETF 169

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y +R++S +  L+  I+     +A   V    G+A  +  ++  +     RG++Y
Sbjct: 170 DDLWLYCYRVASVVGLLSMHIIGYRDGAAPYAVK--LGVALQLTNILRDVGEDAQRGRIY 227

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P + L    L  +  L G+  +R    ++   E       +A   +  + PD   A   
Sbjct: 228 LPQEDLRRFDLTDDDILQGRRDERFRALMRFEIERTHALYDEAWPGIALLDPDGRMAIAA 287

Query: 257 VS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            + I   +L     + + +           +   +  +  +
Sbjct: 288 AAEIYRGILPRIVANDYDVFQKRAYVPLAGKLAILWRTYRR 328


>gi|264665576|gb|ACY70865.1| phytoene synthase [Coix lacryma-jobi]
          Length = 397

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 81/271 (29%), Gaps = 9/271 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLFA---GRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            P +  + +   +L   + + +   +     
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYV 382


>gi|264665572|gb|ACY70863.1| phytoene synthase [Coix lacryma-jobi]
          Length = 397

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 81/271 (29%), Gaps = 9/271 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLFA---GRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            P +  + +   +L   + + +   +     
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYV 382


>gi|264665566|gb|ACY70860.1| phytoene synthase [Coix lacryma-jobi]
          Length = 397

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 82/271 (30%), Gaps = 9/271 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LREAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLFA---GRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E   +G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFNGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            P +  + +   +L   + + +   +     
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYV 382


>gi|72383345|ref|YP_292700.1| squalene and phytoene synthase [Prochlorococcus marinus str.
           NATL2A]
 gi|72003195|gb|AAZ58997.1| phytoene synthase [Prochlorococcus marinus str. NATL2A]
          Length = 312

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 101/298 (33%), Gaps = 17/298 (5%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           +             +         YL  +L PP  R ++  +Y +      + D+     
Sbjct: 3   QPSLNLEDAYEACRKETAQWAKTFYLGTMLLPPAKRRAIWAIYVWCRRTDELMDSTEAQK 62

Query: 72  TRD----MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
                   RL  W+D  ++   G   + +      L   ++++    Q ++DMIE    D
Sbjct: 63  KSRNELSDRLNQWEDKTKNIFAGNTQDDLDAV---LADTLQKFPQSIQPYIDMIEGQRMD 119

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE---------RYSASLRVIKYAGIAQF 178
                    ++ E Y +R++  +  +   ++  +             + R     GIA  
Sbjct: 120 LDTTRYKTFEELELYCYRVAGTVGLMTQGVIGIDAAYTRNPNLPPPDTSRAAIALGIANQ 179

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           +  ++  +     RG++Y PL+ L       E    G  ++     +         +  K
Sbjct: 180 LTNILRDVGEDRGRGRIYLPLEDLKKFNYSEEDLFKGTINENWKALMAFQLARARDWFQK 239

Query: 239 AREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           + E ++++  D   P +  + +   +L   +   + + S+       V+   +  S +
Sbjct: 240 SEEGIKWLSIDARWPIWTSLRLYSGILNSIEKIDYDVFSNRAYVKGWVKAVNLPISYL 297


>gi|264665578|gb|ACY70866.1| phytoene synthase [Coix lacryma-jobi]
          Length = 397

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 81/271 (29%), Gaps = 9/271 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  +L     R ++  +Y +      + D           
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   + ++ +  Q F DMIE    D       + 
Sbjct: 175 LDRWEKRLEDLFA---GRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYNNF 231

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++           +        GIA  +  ++  +     
Sbjct: 232 DELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDAR 291

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  E    G  ++R    +K   +    +  +A   +  +     
Sbjct: 292 RGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIKRARMFFEEAERGVTELSQASR 351

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            P +  + +   +L   + + +   +     
Sbjct: 352 WPVWASLLLYRQILDEIEANDYNNFTKRAYV 382


>gi|13195243|gb|AAK15621.1|AF305430_1 phytoene synthase [Haematococcus pluvialis]
          Length = 389

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           + +R              +   +     YL   L  P+   S+  +Y +      + D  
Sbjct: 82  QASRWTPATLEEAYQRCGQVTSEFAKTFYLGTQLMTPIQAKSIWAIYVWCRRTDELVDGP 141

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
                    L  W++  E++               L   + ++ +  Q F DMIE    D
Sbjct: 142 NANKITPKALDRWEERLEATFA---GRPYDVLDAALSDTISKFPMDIQPFKDMIEGMRMD 198

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQL 182
            +        +   Y +R++  +  +   ++              +     G A  +  +
Sbjct: 199 LHKTRYQTFDELYEYCYRVAGTVGLMTMPVMGIDPSYKGPMDVVYKAALALGTANQLTNI 258

Query: 183 ICQLPIHYH-RGQLYFPLDILGAVGLDRESFL-------SGQNSDRISLAIKIFAELGLK 234
           +  +      R ++Y P++ L   GL  +  L        G+ S++    +K       +
Sbjct: 259 LRDVGEDARERNRIYLPMEDLHQFGLTEQDVLGAVHVPSQGKVSEKWRAFMKFQIARARQ 318

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               A   +  +      P +  + +   +L   + + +   S     ++  +   +  +
Sbjct: 319 CFADAESGVDQLEAKARWPVWSALILYRQILDAIEKNDYDNFSQRAYVSKAKKMASLPLA 378

Query: 294 SIK 296
             +
Sbjct: 379 LTR 381


>gi|194334314|ref|YP_002016174.1| Squalene/phytoene synthase [Prosthecochloris aestuarii DSM 271]
 gi|194312132|gb|ACF46527.1| Squalene/phytoene synthase [Prosthecochloris aestuarii DSM 271]
          Length = 309

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 100/292 (34%), Gaps = 12/292 (4%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP--- 70
           E        +  +  +      YLA L      R  +  +Y     +  + D A +    
Sbjct: 17  ELTLENAYEYCRQIAKHHAKTFYLATLFLSKQQRKPIFAMYALLRTVDDLVDMAEDKIRS 76

Query: 71  -ITRDMRL----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                  L    + WK             +  P  +     ++ + +P +  LD+++   
Sbjct: 77  GSLSRSELSGMMENWKTRLRQCYD--GDHNNDPIMMGWQDTLKHFTIPIELPLDLMDGVA 134

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
            D              Y ++++S +  + + I       A    I+  GIA  +  ++  
Sbjct: 135 MDIDFKPFETFDDLYIYCYKVASVVGLMCSEIFGYSDKKALEHAIE-LGIAMQLTNILRD 193

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           +     RG++Y PL+ L   G  R+ F+  + +D     I+   E    Y  ++   +  
Sbjct: 194 IGEDIDRGRIYLPLEDLDRFGYTRQQFMKKEMNDNFIALIRFQIERARNYYRQSERGIPM 253

Query: 246 ILPDVFPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +  +   A +  S+   ++LK  + +G+ + S     +   +   +     K
Sbjct: 254 LQKNARFAVMVSSLNYSAILKTIEKNGYDVFSQRAYRSFYQKISTIPYIWYK 305


>gi|193213959|ref|YP_001995158.1| Squalene/phytoene synthase [Chloroherpeton thalassium ATCC 35110]
 gi|193087436|gb|ACF12711.1| Squalene/phytoene synthase [Chloroherpeton thalassium ATCC 35110]
          Length = 317

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 98/271 (36%), Gaps = 12/271 (4%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           ++ +   +  S    +     +      Y A    P   R S+  +Y     +  + D A
Sbjct: 35  ESIQLNPEEVSESYEYCRAVSKRHAKTFYFATQFLPKSKRKSVYAVYALCRYVDDIVDRA 94

Query: 68  RNPITRDM--------RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + ++R           +  WK   E+  +G +    +P  +  L  +++Y +P +   +
Sbjct: 95  EDKLSRQTLTKEKIVFLIDKWKTDLEACYRGELI--NNPIMIAWLDTLKKYQIPMELPFE 152

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFI 179
           +IE    D    S     +   Y ++++S +  + + I   +   A    IK  GIA  +
Sbjct: 153 LIEGVCMDLKFKSFETFDELYIYCYKVASVVGLMTSEIFGYKNKEALDYAIK-LGIAMQL 211

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
             ++  +     RG++Y PL+ L       E    G   +     ++        +  +A
Sbjct: 212 TNILRDVGEDSQRGRIYLPLEDLARFNYSPEKLKQGTLDENFIKLMQFEIGRARDFYAEA 271

Query: 240 REEMRYILPDVFPAFIPVSI-TESVLKHAQN 269
            + +  +  D   A +   +    +L + + 
Sbjct: 272 DKGIPMLDKDSRMAVLVSRVNYSKILTYIEK 302


>gi|86609155|ref|YP_477917.1| phytoene synthase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557697|gb|ABD02654.1| phytoene synthase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 292

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 93/291 (31%), Gaps = 7/291 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA----RN 69
                +      +         YL  LL P   R ++  +Y +  +   + D        
Sbjct: 1   MSPLEQSFALCRQITAKHAKTFYLGSLLLPQSKRRAIWAIYAWLRQTDELLDGLEASQAE 60

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                 +L+ W    ES  +    E   P  + L+  +R Y L  + F +M+     D  
Sbjct: 61  VEVTRSKLEQWGSHLESLFQ--GGEPQVPTDLALIHTIRTYRLSIEPFREMLRGQSMDLD 118

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                  +    Y +R++  +  + + I+               GIA  +  ++  +   
Sbjct: 119 TRRYATWEDLRVYCYRVAGVVGLMCSEIMGFVPGRDGREEAVALGIAMQLTNILRDVGED 178

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y PL+ L           +    +R    +        +   +A   +  + PD
Sbjct: 179 ARRGRIYIPLEDLRRFNYSERDLFNYVIDERWMALMDYEIRRARELYAQAERGIPTLQPD 238

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              P    + +   +L   + + +++       + L +   +  +  +  +
Sbjct: 239 SRWPVAASLMLYRQILNAIERNHYQVFRTRAYVSTLSKALALPVAWWRSNY 289


>gi|327198787|emb|CBW37867.1| chloroplast phytoene synthase precursor [Muriella zofingiensis]
 gi|327198789|emb|CBW37868.1| chloroplast phytoene synthase precursor [Muriella zofingiensis]
          Length = 420

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 92/298 (30%), Gaps = 17/298 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +  + I +           +     YL   L  P    ++  +Y +      + D    
Sbjct: 105 PKWADGILNEAYERCGAVTSEYAKTFYLGTQLMTPKQARAIWAIYVWCRRTDELVDGPNA 164

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                  L  W++  E+  +             L   + ++ +  Q F DMI+    D  
Sbjct: 165 SRITPQALDRWEERLEAIFE---GRPYDVLDAALTDTISEFPVDIQPFRDMIDGMRMDLV 221

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLIC 184
                   +   Y +R++  +  ++  ++  +           R     G A  +  ++ 
Sbjct: 222 KSRYQTFDELYEYCYRVAGTVALMSVPVMGIDPSYKGPLERVYRAALALGTANQLTNILR 281

Query: 185 QLPIHYH-RGQLYFPLDILGAVGLDRESFLS-------GQNSDRISLAIKIFAELGLKYL 236
            +      R ++Y P D L   G+  +  +S       G+  DR    ++   +   +  
Sbjct: 282 DVGEDIDGRNRIYLPQDELEQFGISEKDIISGLHSPSTGKIDDRWRRFMRFQIKRARQIF 341

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             A   +  +      P +  + +   +L   + + +   +      +  +   + ++
Sbjct: 342 TDAEAGVDLLDEKARWPVWSALILYRQILDAIEKNDYDNFTRRAYVPKWKKMLSLPAA 399


>gi|195616742|gb|ACG30201.1| phytoene synthase [Zea mays]
          Length = 426

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 90/286 (31%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                       R+     YLA  L  P  R+++  +Y +      + D         + 
Sbjct: 123 LKAAFHRCGEVCREYAKTFYLATQLMTPERRMAIWAIYVWCRRTDELVDGPNASHISALA 182

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   E                 L   V ++ +  Q F DMIE    D         
Sbjct: 183 LDRWESRLEDIFA---GRPYDMLDAALSDTVARFPVDIQPFRDMIEGMRVDLKKSRYRSF 239

Query: 137 KQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y + ++  +  ++  ++              +     G+A  +  ++  +     
Sbjct: 240 DELYLYCYYVAGTVGLMSVPVMGISPASRAATETVYKGALALGLANQLTNILRDVGEDAR 299

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL     L G+ +D     ++        +  +A E    +  +  
Sbjct: 300 RGRIYLPQDELEMAGLSDADVLDGRVTDEWRGFMRGQIARARAFFRQAEEGATELNQESR 359

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + +   +L   + + +   +      +  +   +  + ++
Sbjct: 360 WPVWSSLLLYRQILDEIEANDYYNFTRRAYVPKTKKLMALPKAYLR 405


>gi|121607074|ref|YP_994881.1| squalene/phytoene synthase [Verminephrobacter eiseniae EF01-2]
 gi|121551714|gb|ABM55863.1| farnesyl-diphosphate farnesyltransferase [Verminephrobacter
           eiseniae EF01-2]
          Length = 280

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 96/280 (34%), Gaps = 6/280 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             +V +         Y A L  P   R +++  Y F  E+  V D+   +P     +L W
Sbjct: 4   QQYVQQKAVASGSSFYYAFLFLPAPRRAAITAFYAFCREVDDVVDSQMIDPGVARTKLAW 63

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+     +      +   P    L+    +Y +  ++   +I+    D       D    
Sbjct: 64  WQSEVVKAYA---GQPSHPVMQALMPHTAEYGIAQRHLQAVIDGCRMDLEQTRYLDIAGL 120

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y   ++  +  +   I   +    + +     G+A     +I  +      G++Y PL
Sbjct: 121 TGYCHLVAGIVGEVTARIF-GQTDERTTQYAHMLGLAFQFTNIIRDVGEDALLGRVYLPL 179

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVS 258
             L   G+     L  + SDR +  ++  AE   +   +A   +  +      P  +  S
Sbjct: 180 SELQQFGVKVHELLERRYSDRFTALMRFQAERAHRLYDQALALLPEVDRRAQKPGLMMAS 239

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           I  ++L+   +  F+++        L + W         R
Sbjct: 240 IYRTLLREIGHENFQVLHQRIRLTPLRKFWLAWKVQALGR 279


>gi|193212440|ref|YP_001998393.1| Squalene/phytoene synthase [Chlorobaculum parvum NCIB 8327]
 gi|193085917|gb|ACF11193.1| Squalene/phytoene synthase [Chlorobaculum parvum NCIB 8327]
          Length = 310

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 99/289 (34%), Gaps = 12/289 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP----IT 72
                 +  +  +      YLA    P   +  +  +Y     +  + D A +       
Sbjct: 20  LPNAYDYCRQIAKHHAKTFYLATKFLPKRQQNPIFAMYALLRTVDDLVDLAEDKLSNGQL 79

Query: 73  RDMRL----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
               L    + WK    +   G    S  P  +     +R Y +P +  LD+I+    D 
Sbjct: 80  TREELNDSIEDWKTRLRACYDGKP--SNDPILMAWQDTLRHYRIPIELPLDLIDGVAMDI 137

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
              +     +   Y ++++S +  +   I   +  +A    I   GIA  +  ++  +  
Sbjct: 138 DFQTFETFDELYVYCYKVASVVGLMTVEIFGYKDKAALQHAID-LGIAMQLTNILRDIGE 196

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              R ++Y PL+ L      RE F+S   +D+    +K   E    Y   A   +  +  
Sbjct: 197 DIDRNRIYLPLEDLRRFNYSREEFMSRTMNDKFVALMKFQIERARNYYASADRGIPMLER 256

Query: 249 DVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +   A  I       +LK  + + + + +     +   +   + S  IK
Sbjct: 257 NSRLAVGISSRNYSDILKAIEENDYDVFTRRAYRSLYQKLSTLPSIWIK 305


>gi|189499924|ref|YP_001959394.1| Squalene/phytoene synthase [Chlorobium phaeobacteroides BS1]
 gi|189495365|gb|ACE03913.1| Squalene/phytoene synthase [Chlorobium phaeobacteroides BS1]
          Length = 311

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 100/286 (34%), Gaps = 12/286 (4%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT- 72
           E        +  +  +      YLA L      R  +  +Y     +  + D A + IT 
Sbjct: 17  ELTLQNAYNYCRQIAKHHAKTFYLATLFLSKNQRDPIYAMYALLRTVDDLVDMAEDKITN 76

Query: 73  ---RDMRL----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                  L      WK       +G    +  P  +   + +  + +P +  LD+++   
Sbjct: 77  GTLTREELSSMMADWKTRLHECYEGN--HNNDPIMMAWQNTLASHSIPIELPLDLMDGVT 134

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
            D              Y ++++S +  + + I       A    I+  GIA  +  ++  
Sbjct: 135 MDIDFKPFETFDDLYVYCYKVASVVGLMCSEIFGYCDKKALDHAIE-LGIAMQLTNILRD 193

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           +     RG++Y PL+ L      R+ F+  + +D     I+   E   KY   + + +  
Sbjct: 194 IGEDVDRGRIYLPLEDLDRFNYSRDEFMRKEINDNFKALIRFQIERARKYYASSDQGIPM 253

Query: 246 ILPDVFPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           +  +   A    S+   ++L+  + + + + S     +   +   +
Sbjct: 254 LEKNSRIAVKVSSLNYCNILRAIEENNYDVFSQRAYRSFFQKISTI 299


>gi|317130670|ref|YP_004096952.1| Phytoene synthase [Bacillus cellulosilyticus DSM 2522]
 gi|315475618|gb|ADU32221.1| Phytoene synthase [Bacillus cellulosilyticus DSM 2522]
          Length = 279

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 89/275 (32%), Gaps = 5/275 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S       + +         A  L P   R ++  +Y F   +  + D   NP+T    
Sbjct: 3   ISVAYKMCQQVMEHHSKSFSKAFQLLPLEKRQAVWAIYAFCRTVDDIVDEGTNPVT---E 59

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  +K  FE   +    +      + L     ++D   Q FLDM++    D Y       
Sbjct: 60  LNDFKTNFEQ-FRNGTIDESDYLWIALNDTFSKFDFDIQPFLDMVKGQEMDLYKSRYNTM 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++ E YA+ ++S +  +   IL  E            G+A  I  ++  +     R ++Y
Sbjct: 119 EELEQYAYYVASTVGLMLLPILSPENKEQLRPSAISLGLAMQITNILRDIGEDLDRDRIY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            P D+            + + +       +  + +  +   K    +         P  +
Sbjct: 179 IPKDLRDKHNYTDTMLANKEVNPAFVRMCEELSNIAEQNYEKGLANIELYPQFSRLPVTL 238

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                +++L   + + + +           +   +
Sbjct: 239 SAYYYKAILTSIRQNNYDVFGKRAYVTTQQKQHIL 273


>gi|163961185|gb|ABY50091.1| phytoene synthase [Dunaliella bardawil]
          Length = 424

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 95/304 (31%), Gaps = 17/304 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
            +  R +                +     YL   L  P+    +  +Y +      + D 
Sbjct: 117 PRGLRWQGSSLEAAYERCGAVCSEYAKTFYLGTQLMTPVQARCIWAIYVWCRRTDELVDG 176

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                     L  W++  ES  +    +        L   + ++ L  Q F DMIE    
Sbjct: 177 PNASKITPQALDRWEERLESMFQ---GKPYDVLDAALTDTISKFPLEVQPFRDMIEGMRM 233

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQ 181
           D +        +   Y +R++  +  +   ++  +           +     G A  +  
Sbjct: 234 DLFKSRYHTFDELYEYCYRVAGTVGLMTMPVMGIDPNYKGPIDKVYKAALALGTANQLTN 293

Query: 182 LICQLPIHYH-RGQLYFPLDILGAVGLDRES-------FLSGQNSDRISLAIKIFAELGL 233
           ++  +      R ++Y PLD L   G+  E           G+  +R    +K   +   
Sbjct: 294 ILRDVGEDIRERDRIYLPLDELKQFGISEEEVKAGIHKLSQGKVDERWRAFMKFQIKRAR 353

Query: 234 KYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           +Y  +A + + Y+      P +  + +   +L   + + +   S      +  +   +  
Sbjct: 354 EYFQEAEDGVDYLDVKARWPVWSALILYRQILDVIEKNDYDNFSMRAYVPKSKKFASLPM 413

Query: 293 SSIK 296
           +  +
Sbjct: 414 ALFR 417


>gi|89098043|ref|ZP_01170929.1| phytoene synthase [Bacillus sp. NRRL B-14911]
 gi|89087206|gb|EAR66321.1| phytoene synthase [Bacillus sp. NRRL B-14911]
          Length = 278

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 96/275 (34%), Gaps = 4/275 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +    +    ++      + A    PP  + ++  +Y F   +  + D    P   +  +
Sbjct: 5   AAAYQYCEEVIKKNSATFHRAFSFLPPEKKRAVWAIYAFCRRVDDIVDEGSCP---EEEV 61

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             ++  F    +G +          L  +   +D+ +  F +MIE    D Y    +   
Sbjct: 62  AAFEKEFAVFLEGGLPHQDVMLWTALRDVFVSFDMDSTPFFEMIEGQKMDLYKSRYYTVD 121

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +  HY++ ++S +  +   +L  E            G A  I  ++  +     R ++Y 
Sbjct: 122 ELLHYSYHVASTVGLMLLPVLAPENAGQLKHGAIKLGQAMQITNILRDIGDDLKRDRVYL 181

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIP 256
           P  ++   G   E   SGQ +       +  A++  +Y  +A E +    P    P    
Sbjct: 182 PAALMEKHGYKEEELQSGQLNAAFFGLFEELAKIAEQYYEEALETIHLYPPSSRTPVKGA 241

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             +  ++L   + +G+      +   +  +   + 
Sbjct: 242 AVLYRAILNKIRKNGYNSFGARNYVTKEEKARLLA 276


>gi|42491736|gb|AAS17009.1| phytoene synthase 2 [Oryza sativa Japonica Group]
          Length = 304

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL   L  P  R ++  +Y +      + D   +      
Sbjct: 16  LLGDAYHRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPK 75

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E   +         +   L   V ++ +  Q F DMIE    D +      
Sbjct: 76  ALDRWEKRLEDLFE---GRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYRS 132

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  +   ++           +        GIA  +  ++  +    
Sbjct: 133 FDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDS 192

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y PLD L   GL  E    G+ +D+    +K        +  +A + + ++    
Sbjct: 193 RRGRIYLPLDELAEAGLTEEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSAS 252

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     N+  +   +  +  +
Sbjct: 253 RWPVLASLWLYRQILDAIEANDYNNFTKRAYVNKAKKLLSLPVAYAR 299


>gi|159902699|ref|YP_001550043.1| squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9211]
 gi|159887875|gb|ABX08089.1| Squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9211]
          Length = 313

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 99/293 (33%), Gaps = 17/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR--- 73
             +      +         YL  LL PP  R ++  +Y +      + D+          
Sbjct: 19  LDKAYEICRKETAQWAKTFYLGTLLLPPNKRKAIWAIYVWCRRTDELMDSPEAQQRPINE 78

Query: 74  -DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL  W+        G + + +     +       +    Q +LDMIE    D     
Sbjct: 79  LADRLDEWEAKTRGIFAGEVKDELDAVMADTF---EHFPQSIQPYLDMIEGQRMDLNTSR 135

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLI 183
               K+ E Y +R++  +  +   ++  +    +    +           GIA  +  ++
Sbjct: 136 YSTFKELELYCYRVAGTVGLMTQNVMGLDPAYTNAPWSEKPDPSKAAVALGIANQLTNIL 195

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P + L   G      ++G+ + +    +    +   ++   +   +
Sbjct: 196 RDVGEDRARGRIYIPQEDLKKFGYSESDLMAGKINSQWKELMAFQLKRAREWFSSSEAGI 255

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           R++  D   P +  + +   +L   +   + + ++    N+ V+   +    +
Sbjct: 256 RWLSSDARWPVWTSLRLYRGILNSIERLDYDVFNNRAYVNKWVKILEIPICYL 308


>gi|163961183|gb|ABY50090.1| phytoene synthase [Dunaliella bardawil]
          Length = 424

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 95/304 (31%), Gaps = 17/304 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
            +  R +                +     YL   L  P+    +  +Y +      + D 
Sbjct: 117 PRGLRWQGSSLEAAYERCGAVCSEYAKTFYLGTQLMTPVQARCIWAIYVWCRRTDELVDG 176

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                     L  W++  E   +    +        L   + ++ L  Q F DMIE    
Sbjct: 177 PNASKITPQALDRWEERLEGMFQ---GKPYDVLDAALTDTISKFPLEVQPFRDMIEGMRI 233

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQ 181
           D +        +   Y +R++  +  +   ++  +           +     G A  +  
Sbjct: 234 DLFKSRYHTFDELYEYCYRVAGTVGLMTMPVMGIDPNYKGPIDKVYKAALALGTANQLTN 293

Query: 182 LICQLPIHYH-RGQLYFPLDILGAVGLDRESFLS-------GQNSDRISLAIKIFAELGL 233
           ++  +      R ++Y PLD L   G+  E   +       G+  +R    +K   +   
Sbjct: 294 ILRDVGEDIRERDRIYLPLDELKQFGISEEEVKAGIHKPSQGKVDERWRAFMKFQIKRAR 353

Query: 234 KYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           +Y  +A + + Y+      P +  + +   +L   + + +   S      +  +   +  
Sbjct: 354 EYFQEAEDGVDYLDVKARWPVWSALILYRQILDVIEKNDYDNFSMRAYVPKSKKFASLPM 413

Query: 293 SSIK 296
           +  +
Sbjct: 414 ALFR 417


>gi|254447234|ref|ZP_05060701.1| phytoene synthase [gamma proteobacterium HTCC5015]
 gi|198263373|gb|EDY87651.1| phytoene synthase [gamma proteobacterium HTCC5015]
          Length = 298

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 102/286 (35%), Gaps = 7/286 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            ++   + L   +      Y +    P   R+ +  LY F  E+  V D   +       
Sbjct: 7   LAQARAYCLDKTKSSGSSFYHSFRFLPEEQRLGMIALYAFCREVDDVVDETLDEQQARSE 66

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   +         +  P  + L   +++++L  ++ L++I+    D   +   + 
Sbjct: 67  LDEWRQRVDDLYN---GRADHPVCIALKDDLQRFNLHREHLLELIDGMAMDLDQNEYANF 123

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y +R +S +  L   I         L+     G+A  +  ++  +     RG++Y
Sbjct: 124 SELALYCYRAASVVGLLTVEIFGYRDRGT-LQYAHDLGMAFQLTNILRDVGEDAKRGRIY 182

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFI 255
            P D L   G+ +        +          AE   +Y  KA   +            I
Sbjct: 183 LPQDELQRFGVAKAHLHLNHTTPEAQKLFAYQAERAERYYQKAFATLPEGDRYAQRSGLI 242

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI--KKRF 299
             ++   +L+H     F+I+    + ++  +     +++   KKR+
Sbjct: 243 MAAVYHRLLQHIGQRDFRILEQRPSLSKWRKIRIAWTAARAEKKRY 288


>gi|89900341|ref|YP_522812.1| squalene/phytoene synthase [Rhodoferax ferrireducens T118]
 gi|89345078|gb|ABD69281.1| farnesyl-diphosphate farnesyltransferase [Rhodoferax ferrireducens
           T118]
          Length = 279

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 95/279 (34%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +V +         Y A L  PP  R +++  Y F  E+  V D   +P     +L WW
Sbjct: 4   QDYVQQKAAASGSSFYYAFLFLPPTQRAAITAFYAFCREIDDVVDDMVDPSVASSKLAWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +     S          P    L+ +  ++ +   +   +IE    D       D    +
Sbjct: 64  QAEVTQSFA---GRPSHPVLQALMPLAAEFQIEQHHLQSVIEGCQMDLTQTRYLDYPGLQ 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y   ++  +  +A  I        +L      G A  +  +I  +     RG++Y P++
Sbjct: 121 RYCHLVAGVVGEVAAQIFGQTVPQTTL-YAHKLGQALQLTNIIRDVGEDAGRGRIYLPVN 179

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSI 259
            L    +     L    S+R +  ++  A        +A   +  +      P  +  SI
Sbjct: 180 ELQQFDVKAHEILKRSYSERFTALMQFQARRAQGLYDEALALLPAVDRRAQKPGLMMASI 239

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             ++L   ++  F+++    +   L + W         R
Sbjct: 240 YRALLTEIEHDNFQVLHQRISLTPLRKLWLAWKVQALGR 278


>gi|319943623|ref|ZP_08017904.1| phytoene synthase [Lautropia mirabilis ATCC 51599]
 gi|319742856|gb|EFV95262.1| phytoene synthase [Lautropia mirabilis ATCC 51599]
          Length = 291

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 96/282 (34%), Gaps = 9/282 (3%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  PP  R +++ LY +  E+  V D+  +      +L WW 
Sbjct: 5   EYCQDKAVKSGSSFYYSFLFLPPERRRAITALYAYCREVDDVADSQGDRNVARRKLDWWA 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P +  L   +  Y L  +  +++I+    D   +   D +  + 
Sbjct: 65  QEVGALFD---GAPTHPVTRALQPFLAPYGLRRRQLVEVIDGMRMDLDGERYLDFEGLKL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  R +  +  ++  I   E     L+     G+A  +  +I  +      G++Y P   
Sbjct: 122 YCRRAAGVVGEMSAAIFGYEDPKT-LQYADRLGLAFQLTNIIRDVGEDARLGRVYLPQQD 180

Query: 202 LGAVGLDRESFLSGQN----SDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIP 256
           L   GL R+  LS +     S      +        +   +A + +  +      P  I 
Sbjct: 181 LIRHGLSRQQILSARAEVQESPAFRALMAEQVVRARQAYREAFDLLPDVDRARQRPGLIM 240

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +I  S+L      G+ +++       L + W    +    R
Sbjct: 241 AAIYASLLDEIARSGYPVMTQRIALTPLRKFWLACRTRATGR 282


>gi|167860186|ref|NP_001108117.1| phytoene synthase2 [Zea mays]
 gi|37499616|gb|AAQ91837.1| phytoene synthase 2 [Zea mays]
 gi|60101462|gb|AAX13807.1| phytoene synthase 2 [Zea mays]
 gi|194701490|gb|ACF84829.1| unknown [Zea mays]
 gi|219884359|gb|ACL52554.1| unknown [Zea mays]
          Length = 402

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 90/287 (31%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL   L  P  R ++  +Y +      + D          
Sbjct: 114 LLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPT 173

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E   +         +   L   V ++ +  Q F DM++    D +      
Sbjct: 174 ALDRWEKRLEDLFE---GRPYDMYDAALSDTVSKFPVDIQPFKDMVQGMRLDLWKSRYMT 230

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  +   ++           +        GIA  +  ++  +    
Sbjct: 231 FDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDA 290

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y PLD L   GL  E    G+ + +    +K   +    +  +A + + ++    
Sbjct: 291 RRGRIYLPLDELAQAGLTEEDIFRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSAS 350

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +      +  +   +  +  +
Sbjct: 351 RWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKKLLSLPLAYAR 397


>gi|41394357|gb|AAS02284.1| phytoene synthase 2 [Zea mays]
          Length = 394

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 90/287 (31%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL   L  P  R ++  +Y +      + D          
Sbjct: 106 LLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPT 165

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E   +         +   L   V ++ +  Q F DM++    D +      
Sbjct: 166 ALDRWEKRLEDLFE---GRPYDMYDAALSDTVSKFPVDIQPFKDMVQGMRLDLWKSRYMT 222

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  +   ++           +        GIA  +  ++  +    
Sbjct: 223 FDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDA 282

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y PLD L   GL  E    G+ + +    +K   +    +  +A + + ++    
Sbjct: 283 RRGRIYLPLDELAQAGLTEEDIFRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSAS 342

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +      +  +   +  +  +
Sbjct: 343 RWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKKLLSLPLAYAR 389


>gi|76443554|dbj|BAE45296.1| phytoene synthase [Gentiana lutea]
          Length = 426

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 94/289 (32%), Gaps = 10/289 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSF-LYYFHTELMRVRDTARNPITR 73
            + +           +     Y    L  P  R+++   +Y +      + D        
Sbjct: 132 NVLNEAYDRCREVCAEYAKSFYWGTQLMTPERRLAIWADIYVWRRRTDELVDGPNASHIN 191

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  W+   E        + +      L   + +Y +  Q F DMIE    D      
Sbjct: 192 PPALDRWEARSEDVF---TGQPLDMLDAALSDTITKYPVDIQPFRDMIEGMRMDLKKSRY 248

Query: 134 FDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +  
Sbjct: 249 KNFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYDAALSLGIANQLTNILRDVGE 308

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              RG++Y P D L   GL  E   +G+ +D+  + +K   +   K+   A + +  +  
Sbjct: 309 DARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIKRARKFYDDAEKGVPELSS 368

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               P +  +     +L   + + +   +     N+  +   M  +  K
Sbjct: 369 ASRLPVWAALLFYRKILDEIEANDYNNFAQRAYVNEAKKLLAMPVACAK 417


>gi|37521313|ref|NP_924690.1| phytoene synthase [Gloeobacter violaceus PCC 7421]
 gi|35212310|dbj|BAC89685.1| phytoene synthase [Gloeobacter violaceus PCC 7421]
          Length = 317

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 105/280 (37%), Gaps = 6/280 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
                  +   +     Y A LL P   R ++  +Y +      + D+        M L 
Sbjct: 39  ESYEACRQLTAEYSKTFYFASLLFPMEKRRAIWAIYAWCRRTDELVDSLDFKADPRM-LD 97

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
            W++  +    G   +      + L   VR + L  + FLDMIE    D       + ++
Sbjct: 98  RWQERLDKIFGGGGEDVYD---LALADAVRNFPLEIRPFLDMIEGMRMDLTQARYENWEE 154

Query: 139 FEHYAFRISSRLIHLATMILD-SERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
              Y +R++  +  ++  ++   +    + R     G+A+ +  ++  +     RG++Y 
Sbjct: 155 LHTYCYRVAGTVGLMSCAVMGLVDDCPEARRRAVALGVAKQMTNILRDVGEDARRGRIYL 214

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIP 256
           PL+ L   G   E   +    +R +  ++           +A + + Y++PD   P +  
Sbjct: 215 PLEDLRKFGYSEEDLFAYVVDERWAALMEFEIARAEAIYLEAEKGIPYLIPDARWPVWAS 274

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           + +   +L   +++G++         +  +   +  +  K
Sbjct: 275 LILYRRILTKVRSNGYQNFLQRAYVPRAEKFLLLPVAWAK 314


>gi|77556698|gb|ABA99494.1| Phytoene synthase, chloroplast precursor, putative, expressed
           [Oryza sativa Japonica Group]
 gi|125537487|gb|EAY83975.1| hypothetical protein OsI_39199 [Oryza sativa Indica Group]
 gi|215706921|dbj|BAG93381.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 398

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 9/287 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL   L  P  R ++  +Y +      + D   +      
Sbjct: 110 LLGDAYHRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPK 169

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+   E   +         +   L   V ++ +  Q F DMIE    D +      
Sbjct: 170 ALDRWEKRLEDLFE---GRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYRS 226

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  +   ++           +        GIA  +  ++  +    
Sbjct: 227 FDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDS 286

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y PLD L   GL  E    G+ +D+    +K        +  +A + + ++    
Sbjct: 287 RRGRIYLPLDELAEAGLTEEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSAS 346

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     N+  +   +  +  +
Sbjct: 347 RWPVLASLWLYRQILDAIEANDYNNFTKRAYVNKAKKLLSLPVAYAR 393


>gi|302850513|ref|XP_002956783.1| hypothetical protein VOLCADRAFT_97827 [Volvox carteri f.
           nagariensis]
 gi|300257843|gb|EFJ42086.1| hypothetical protein VOLCADRAFT_97827 [Volvox carteri f.
           nagariensis]
          Length = 393

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 96/305 (31%), Gaps = 17/305 (5%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           + +  R    +  +      +   +     YL   L  P    ++  +Y +      + D
Sbjct: 70  VPRGFRWSGGVLDQAYEKCGQVTSEYAKTFYLGTQLMTPAQAKAVWAVYVWCRRTDELVD 129

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W++  E+       +        L     ++ L  Q F DMIE   
Sbjct: 130 GPNASRITPKALDRWEERLEALFN---GKPYDELDAALTDTASRFPLHIQPFRDMIEGMR 186

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIG 180
            D          +   Y +R++  +  + T I+              R     G A  + 
Sbjct: 187 MDLVKSRYETFDELYEYCYRVAGTVALMTTPIMGIEPTYKGHLEPVYRAALALGTANQLT 246

Query: 181 QLICQLPIHY-HRGQLYFPLDILGAVGLDRESFL-------SGQNSDRISLAIKIFAELG 232
            ++  +      R ++Y PLD L   G+  +  L       +G+  DR    +K   +  
Sbjct: 247 NILRDVGEDAYQRNRIYVPLDELDKYGISEKELLTGLHAPTTGKMDDRWRRFMKFQIKRA 306

Query: 233 LKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +Y   A   +  + P    P +  + +   +L   + +G+   S      +  +   + 
Sbjct: 307 RQYFADAEAGVDLLDPKARWPVWSALILYRQILDAIELNGYDNFSKRAYVPKWRKMVSLP 366

Query: 292 SSSIK 296
            +  +
Sbjct: 367 VAYTR 371


>gi|218202607|gb|EEC85034.1| hypothetical protein OsI_32341 [Oryza sativa Indica Group]
          Length = 464

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 90/306 (29%), Gaps = 29/306 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +          ++     YLA  L  P  R ++  +Y +      + D         + 
Sbjct: 145 LNAAFDRCGEVCKEYAKTFYLATQLMTPERRRAIWAIYVWCRRTDELVDGPNASHMSALA 204

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPN--------------------QY 116
           L  W+   +                 L   V  + +                      Q 
Sbjct: 205 LDRWESRLDDIFA---GRPYDMLDAALSHTVATFPVDIQASTTNTMKSQEYSQYAPCVQP 261

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIK 171
           F DMIE    D          +   Y + ++  +  +   ++              +   
Sbjct: 262 FRDMIEGMRLDLTKSRYRSFDELYLYCYYVAGTVGLMTVPVMGISPDSRANTETVYKGAL 321

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G+A  +  ++  +     RG++Y P+D L   GL  +    G+ +DR    ++     
Sbjct: 322 ALGLANQLTNILRDVGEDARRGRIYLPMDELEMAGLSEDDIFDGRVTDRWRCFMRDQITR 381

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              +  +A E    +  +   P +  + +   +L   + +G+   +      +  +   +
Sbjct: 382 ARAFFRQAEEGASELNQESRWPVWASLLLYRQILDEIEANGYNNFTKRAYVPKAKKIVAL 441

Query: 291 LSSSIK 296
             +  +
Sbjct: 442 PKAYYR 447


>gi|113867480|ref|YP_725969.1| squalene/phytoene synthase [Ralstonia eutropha H16]
 gi|113526256|emb|CAJ92601.1| Squalene/phytoene synthase [Ralstonia eutropha H16]
          Length = 335

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 95/277 (34%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +    +       Y + L  P   R +++ LY +  E+  V D + +      +L WW+
Sbjct: 62  QYCQEKVAQSGSSFYYSFLFLPAERRRAITALYAWCREVDDVVDDSHDAGLAHQQLDWWR 121

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                  +    E   P +  L   VR   LP     +++E    D       D      
Sbjct: 122 AELRRLFE---GEPTHPTTKALQPHVRSAGLPQGEMSEVLEGMEMDLTQTRYLDEPGLAR 178

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  L+  +         L   +  G +  +  ++  +     RG++Y P++ 
Sbjct: 179 YCHCVAGVVGTLSARLFGYTDPQT-LVFAERLGQSLQLVNILRDVGEDARRGRIYLPVNT 237

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L GQ+S+R    ++  A        +A   +            +  +I 
Sbjct: 238 LQQFQVPASEILKGQHSERFVALMQYHAGRARALYHEALALLPKQDRRAQRAGLLMGAIY 297

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   F++++       L + W    + ++ 
Sbjct: 298 HALLDELEASQFQVLNQRIALTPLRKLWIAWKTWVRN 334


>gi|302564592|ref|NP_001180807.1| phytoene synthase-like [Macaca mulatta]
          Length = 333

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 3/277 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR  DY+ YL  LL P   R S+  L  F+ EL +V+D+        MR+Q+WK 
Sbjct: 60  YCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRIQFWKK 119

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             E            P ++EL   V++++L  ++ + +I+    +  + +  + K+ E+Y
Sbjct: 120 TVEDIYCDKP--PQQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIKELENY 177

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
           A    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI 
Sbjct: 178 AENTQSSLLYLTLEILGIKDVHA-DHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDIC 236

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES 262
              G+ +E FL       +   I   A     +L  AR   + +    FPAF+     E 
Sbjct: 237 MLHGVSQEDFLRRNRDKNVRDVIYDIASQAHLHLKHARSFHKSVPVKAFPAFLQTVSLED 296

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            LK  +   F I   S      + P Y+   S +KR+
Sbjct: 297 FLKKIRRVDFDIFHPSLQQKNTLLPLYLYMQSWRKRY 333


>gi|123965406|ref|YP_001010487.1| squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9515]
 gi|123199772|gb|ABM71380.1| Squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9515]
          Length = 302

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 102/303 (33%), Gaps = 17/303 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +      ++      +  +      YL  LL P   R ++  +Y +      + D+   
Sbjct: 1   MKNSLSQLNKAYEICRKETQQWAKTFYLGTLLLPYEKRKAIWAIYVWCRRTDEIMDSVEA 60

Query: 70  PITRDMR----LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W+    +  KG I   +      L   + ++    + +LDMIE   
Sbjct: 61  SSKTTEELSDNLDEWEANTINVFKGNIKSDLDAV---LFDTIEKFPQNIEPYLDMIEGQR 117

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIA 176
            D       +  + + Y +R++  +  +   ++  +    S                GIA
Sbjct: 118 MDLKKYRYENFSELKLYCYRVAGTVGLMTQNVMGIDSAYTSAPWSNMPDPSEAAIALGIA 177

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  ++  +     RG++Y P + +       E  L G  + +  + +         + 
Sbjct: 178 NQLTNILRDVGEDRQRGRIYLPQEDMNNFNYSEEELLKGVINTQWKMLMNFQLTRARDWF 237

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            K+ + ++++  D   P +  + +   +L   +   + + ++       V+ + +  S +
Sbjct: 238 KKSEDGIKWLSADARWPVWTSLRLYRGILDSIEKLDYDVFNNRAFVKNSVKAFEIPISFL 297

Query: 296 KKR 298
             R
Sbjct: 298 ISR 300


>gi|328958210|ref|YP_004375596.1| dehydrosqualene synthase [Carnobacterium sp. 17-4]
 gi|328674534|gb|AEB30580.1| dehydrosqualene synthase [Carnobacterium sp. 17-4]
          Length = 291

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 93/282 (32%), Gaps = 5/282 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           ++   +D  +    ++      Y A    P     ++  +Y F        D       +
Sbjct: 11  QETIKQDYQYCEEIIKKHSKSFYYAFSRLPKAKAQAIFAIYAFCRRADDSVDLVDTKEEQ 70

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
            + +   +       +G   +   P    L  +  +YD+  + F D +     D      
Sbjct: 71  LLAVANLEKELSLFEQGNPID--HPIWRSLTDVFERYDMSIEPFYDQLIGQKMDIDFAEP 128

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR- 192
            D  + E Y++ ++  +  +   +L S+ +    ++    GIA  +  ++  +   + + 
Sbjct: 129 KDLSELETYSYYVAGSVGLMLLPVLASKTHQDLTQLAINLGIAMQLTNILRDVGEDFQKI 188

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF- 251
            ++Y P+  L A    R        +       +  A+         +E  RY   D   
Sbjct: 189 DRIYLPVSELAAENYTRTDIEQKIINANFIRIWEKLAQRAEYLYDDVQEGFRYFDEDSRL 248

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           P  +  +I   +L   + + +   +  +  + L     +  S
Sbjct: 249 PVKLSSAIYRGLLNAVRKNNYDCFTKRNYVSPLEMQ-RIYRS 289


>gi|156741733|ref|YP_001431862.1| squalene/phytoene synthase [Roseiflexus castenholzii DSM 13941]
 gi|156233061|gb|ABU57844.1| Squalene/phytoene synthase [Roseiflexus castenholzii DSM 13941]
          Length = 337

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 91/282 (32%), Gaps = 9/282 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                  + +   R      +L+  L P   R+++  LY F        D  R       
Sbjct: 55  TLDAAYQYCVEVTRVNSRSFHLSSQLLPREKRLAVRALYAFCRASDDTVD--RATGDPAR 112

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W     +        +  P  +     VR+Y LP     +++     D        
Sbjct: 113 TLANWVARVHAPH----PPADHPVLLAWDDTVRRYALPRALVDELLAGIAMDLTIHRYET 168

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 Y +R++S +  L+  I+     +A   V    G+A  +  ++  +     RG++
Sbjct: 169 FDDLWLYCYRVASVVGLLSMHIIGHRDGAAPYAVK--LGVALQLTNILRDVGEDARRGRI 226

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P + L   GL  +  L G+  DR    ++   E       ++   +  + PD   A  
Sbjct: 227 YLPQEDLRRFGLTDDDILHGRRDDRFRALMRFEMERAHALYDESWPGIALLDPDGRMAIA 286

Query: 256 PVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             + I   +L     + + +           +   +  +  K
Sbjct: 287 AAAEIYRGILPRIVANDYDVFQKRAYVPFTGKIAILWRAYRK 328


>gi|163848234|ref|YP_001636278.1| squalene/phytoene synthase [Chloroflexus aurantiacus J-10-fl]
 gi|222526144|ref|YP_002570615.1| Squalene/phytoene synthase [Chloroflexus sp. Y-400-fl]
 gi|163669523|gb|ABY35889.1| Squalene/phytoene synthase [Chloroflexus aurantiacus J-10-fl]
 gi|222450023|gb|ACM54289.1| Squalene/phytoene synthase [Chloroflexus sp. Y-400-fl]
          Length = 335

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 87/287 (30%), Gaps = 9/287 (3%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
                +  +       + +R      + +    PP  R ++  LY F        D    
Sbjct: 46  PPPPGRTLAEAYAICEQIIRRHSKSFFFSTQFLPPAQRRAVRALYAFCRTTDDTVD-MAE 104

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                   +W +       +    ++  P  +      ++Y+L      +++     D  
Sbjct: 105 SDPARALAEWVR-----IARRPRFDTSHPVLLAWADTCQRYNLAPSLIDELLAGVAMDLT 159

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                       Y +R++S +  L   I  +   +    +    G+A  +  ++  +   
Sbjct: 160 ISRYTTFADLWLYCYRVASVVGLLVIGITGAAPGAQPYAIK--LGVALQLTNILRDIGED 217

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             R ++Y P D L   GL  +  L+    +R    +K       +   ++   +  + P+
Sbjct: 218 ADRQRVYLPEDELARFGLTADDILARVYDERFIRLMKFQIARARQLYAESWPGIALLPPE 277

Query: 250 VFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           V  A    + +   +L   + + +   +         +   +     
Sbjct: 278 VRLAIAAAARVYSGILDKIEQNQYDSYTRRAYVPLREKIARLPGIWW 324


>gi|194391378|dbj|BAG60807.1| unnamed protein product [Homo sapiens]
          Length = 301

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 3/277 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR  DY+ YL  LL P   R S+  L  F+ EL +V+D+        MR+Q+WK 
Sbjct: 28  YCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKK 87

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             E            P ++EL   V++++L  ++ + +++    +  + +  + K+ E+Y
Sbjct: 88  TVEDIYCDNP--PHQPVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENY 145

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
           A    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI 
Sbjct: 146 AENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDIC 204

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES 262
              G+ +E FL       +   I   A     +L  AR   + +    FPAF+     E 
Sbjct: 205 MLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQTVSLED 264

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            LK  Q   F I   S      + P Y+   S +K +
Sbjct: 265 FLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY 301


>gi|307103537|gb|EFN51796.1| hypothetical protein CHLNCDRAFT_27599 [Chlorella variabilis]
          Length = 383

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 96/293 (32%), Gaps = 16/293 (5%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           +          +     +L   L  P    ++  +Y +      + D           L 
Sbjct: 93  QAYDRCGEVTSEYAKTFFLGTQLMTPEQAKAIWAIYVWCRRTDELVDGPNASRITPAALD 152

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
            W++  ++  +             L   + ++ +  Q F DMI     D          +
Sbjct: 153 RWENRLDALFE---GRPYDALDAALTDTISRFPVHIQPFRDMIGGMRMDLVKSRYETYDE 209

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIHYH-RGQ 194
              Y +R++  +  ++  ++  ++   +  V +     G A  +  ++  +      R +
Sbjct: 210 LYDYCYRVAGAVALMSVPVMGVDKSYKAENVYRAALALGTANQLTNILRDVGEDASQRNR 269

Query: 195 LYFPLDILGAVGLDRESFLS--------GQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
           +Y PL+ L A  +  E  L+        G+  DR    ++       +   +A   +  +
Sbjct: 270 IYIPLEELAAFKIREEEVLNGTLFAASTGRIDDRWRAFMQFQIARARQIFAEAEAGVNLL 329

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             +   P +  + +   +L   + + +   +      +  +   + ++ ++ R
Sbjct: 330 DAEARWPVWTALVLYRQILDAIEANDYNNFTQRAYVPKWRKLVSLPAALLRAR 382


>gi|297624467|ref|YP_003705901.1| Phytoene synthase [Truepera radiovictrix DSM 17093]
 gi|297165647|gb|ADI15358.1| Phytoene synthase [Truepera radiovictrix DSM 17093]
          Length = 299

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 98/277 (35%), Gaps = 2/277 (0%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                   +  R      YL     P   R ++S +Y          D A +P     RL
Sbjct: 16  KEAVAACAQLTRAHSSTFYLGSRFFPARERSAVSVIYAVCRSGDDAVDEAPSPEVGRRRL 75

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             W++  E +  G      +   V L  +++ Y++P   F ++      D  N       
Sbjct: 76  LVWQEGIERAYAGEPQ-PGAFLEVGLHWVLQHYEVPRSAFDELYLGLESDLDNRPFHTMD 134

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +   Y  R++  +  L   I       A+L+     G A  +  ++  +      G+LY 
Sbjct: 135 ELMLYCRRVAGVVGLLIAPIAGYRGGEATLQCALALGQAMQLTNILRDVGEDLAMGRLYL 194

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           PL+++   G+ R S  +G  SDR    ++  AE       +  + +  +      A    
Sbjct: 195 PLELMDKHGVTRASLEAGVVSDRYIALLEELAERTCALYREGWQGIPKLNGVAAAAVGVA 254

Query: 258 SI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           ++  E +L   + +G+  ++       + R   +  +
Sbjct: 255 ALNYEGILNKLRQNGYDNLTKRAYLRPVERLALIPKA 291


>gi|78183881|ref|YP_376315.1| phytoene synthase [Synechococcus sp. CC9902]
 gi|78168175|gb|ABB25272.1| phytoene synthase [Synechococcus sp. CC9902]
          Length = 304

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 100/294 (34%), Gaps = 11/294 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    R   +     YL  LL P   R ++  +Y +      + D+A         
Sbjct: 10  LDEAFEACRRETAEWAKTFYLGTLLLPLEKRRAIWAIYVWCRRTDELMDSAEAQSRSVEE 69

Query: 77  LQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L    D +E  T+        +     +   + ++    Q +LDMIE    D        
Sbjct: 70  LAERLDHWEQQTRDLFNGHVSNDLDAVMAHTLERFPQDIQPYLDMIEGQRMDLTWTRYPT 129

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLICQL 186
            +  + Y +R++  +  +   ++  ++   S                GIA  +  ++  +
Sbjct: 130 FEDLKLYCYRVAGTVGLMTQGVMGVDQAYTSAPWSDSPDTSDAAVALGIANQLTNILRDV 189

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG++Y P + L   G      ++G+ ++     +    E   ++  ++   +R++
Sbjct: 190 GEDRGRGRIYLPQEDLDRFGYSESDLMAGRLNEAWRELMAFQLERAREWFTRSESGVRWL 249

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             D   P +  + +   +L   +   + + +      ++ +   +  S    +F
Sbjct: 250 SGDARWPVWTSLRLYRGILDAIERIDYDVFNRRAYVGKVNKLLDLPRSYALAQF 303


>gi|294497424|ref|YP_003561124.1| phytoene synthase [Bacillus megaterium QM B1551]
 gi|294347361|gb|ADE67690.1| phytoene synthase [Bacillus megaterium QM B1551]
          Length = 282

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 92/267 (34%), Gaps = 5/267 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +        +++     Y A  + P   R ++  +Y F  ++  + D   NP      
Sbjct: 6   LDKAYNQCEEIIKENSKTFYKAFSMLPSKQRKAVWAVYAFCRQVDDIVDEGCNPGI---E 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQ ++  F     G +        V L ++  QY++  Q F DMI     D         
Sbjct: 63  LQQFESEFARFKNGELLNES-AMWVALRNVFEQYEMNVQAFDDMITGQRMDLVKKEYDTL 121

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            + + Y++ ++S +  +   IL    +          GIA  +  ++  +     RG++Y
Sbjct: 122 DEVKTYSYHVASTVGLMLLPILAPTTHKELEEEAVALGIAMQLTNILRDVGEDLERGRIY 181

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            P D++ + G  R    +   +       +  A+    Y  K  + +         P   
Sbjct: 182 LPKDLMNSYGYTRMLLENRWVTSEFIEMWEHLAKEAEMYYIKGLQSIHKYPVASRLPLTG 241

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPN 282
              +  ++L   +   + + +  H   
Sbjct: 242 AAHLYRAILDKIRKENYDVFTEKHFVT 268


>gi|311029422|ref|ZP_07707512.1| phytoene synthase [Bacillus sp. m3-13]
          Length = 277

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 89/273 (32%), Gaps = 5/273 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           +        +++     Y A +L P   + ++  +Y F  ++  + D   NP        
Sbjct: 6   KAYHHCESIIKEHSKTFYKAFMLLPKEKKQAVWAVYAFCRQVDDIVDDGMNPKEEL---- 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           +      +        S  P  + L  +  +Y++  Q F DMI     D Y       ++
Sbjct: 62  FAFKAMFADFLEGKLPSEDPMWLALQDVFNRYEMDVQSFHDMIVGQEMDLYKKLYNSEEE 121

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
             HY++ ++S +  +   IL               G A  I  ++  +     R ++Y P
Sbjct: 122 VLHYSYHVASTVGLMLLPILAPTNKDILREDAIALGQAMQITNILRDIGEDLERDRIYIP 181

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPV 257
           +++L   G   +       +++     +  A        +A   +         P     
Sbjct: 182 IEMLEKAGYSLDDLNKHIVNNKFISVWEEMANKAESLYEQALSTIHLYPMHSRTPVKGAA 241

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
            +  ++L   +  G+ +    H      +   +
Sbjct: 242 YLYRAILGSIRKKGYSVFKTKHYVTSEEKQQII 274


>gi|284944360|gb|ADC32152.1| phytoene synthase [Auxenochlorella protothecoides]
 gi|314991140|gb|ADT65126.1| phytoene synthase [Auxenochlorella protothecoides]
          Length = 380

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 96/307 (31%), Gaps = 18/307 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           T + R +     +          +     +L   L  P    ++  +Y +      + D 
Sbjct: 76  TLSQRWQGPELLQAYDRCGEVTSEYAKTFFLGTQLMTPEQAKAIWAIYVWCRRTDELVDG 135

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                     L  W++  E+  +             L   + ++ +  Q F DMI     
Sbjct: 136 PNASRITPAALDRWENRLEALFE---GRPYDALDAALTDTISRFPVHIQPFRDMIGGMRM 192

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQ 181
           D          +   Y +R++  +  ++  ++              R     G A  +  
Sbjct: 193 DLVKSRYETYDELYDYCYRVAGTVALMSVPVMGVDKSYKGPLETVYRSALALGTANQLTN 252

Query: 182 LICQLPIHYH-RGQLYFPLDILGAVGLDRESFLS--------GQNSDRISLAIKIFAELG 232
           ++  +      R ++Y PLD L A  +  E  L+        G+  DR    ++      
Sbjct: 253 ILRDVGEDASQRNRIYVPLDELAAFKIREEEVLNGTLFAASTGRIDDRWRAFMQFQIARA 312

Query: 233 LKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +    A E +  +  +   P +  + +   +L   + + +   +      +  +   + 
Sbjct: 313 RQIFTDAEEGVNQLDAEARWPVWTALVLYRQILDAIEANDYNNFTRRAYVPKWRKLVSLP 372

Query: 292 SSSIKKR 298
           ++ ++ R
Sbjct: 373 AALLRAR 379


>gi|124517691|ref|NP_689629.2| phytoene synthase-like precursor [Homo sapiens]
 gi|182676420|sp|Q330K2|CH038_HUMAN RecName: Full=UPF0551 protein C8orf38, mitochondrial; AltName:
           Full=Putative phytoene synthase; Flags: Precursor
          Length = 333

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 3/277 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR  DY+ YL  LL P   R S+  L  F+ EL +V+D+        MR+Q+WK 
Sbjct: 60  YCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKK 119

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             E            P ++EL   V++++L  ++ + +++    +  + +  + K+ E+Y
Sbjct: 120 TVEDIYCDNP--PHQPVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENY 177

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
           A    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI 
Sbjct: 178 AENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDIC 236

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES 262
              G+ +E FL       +   I   A     +L  AR   + +    FPAF+     E 
Sbjct: 237 MLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQTVSLED 296

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            LK  Q   F I   S      + P Y+   S +K +
Sbjct: 297 FLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY 333


>gi|48686711|gb|AAT46069.1| phytoene synthase [Dunaliella salina]
          Length = 419

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 94/294 (31%), Gaps = 17/294 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                       ++     YL   L  P+    +  +Y +      + D           
Sbjct: 121 LEAAYERCGAVCKEYAKTFYLGTQLMTPVQARCIWAIYVWCRRTDELVDGPNASKITPQA 180

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W++      +             L   + ++ L  Q F DMIE    D +       
Sbjct: 181 LDRWEERLNGVFQ---GRPYDVLDAALTDTISKFPLEVQPFRDMIEGMRMDLFKSRYQTF 237

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y +R++  +  +   ++  +           R     G A  +  ++  +     
Sbjct: 238 DELYEYCYRVAGTVGLMTVPVMGIDPNYKGPLDKVYRAALALGTANQLTNILRDVGEDIR 297

Query: 192 -RGQLYFPLDILGAVGLDRESFLS-------GQNSDRISLAIKIFAELGLKYLFKAREEM 243
            R ++Y PLD L   G+  +   +       G+  +R  + +K   +   +Y  +A + +
Sbjct: 298 ERDRIYLPLDELREFGISEDEVRAGIHKPSQGKVDERWRMFMKFQIQRAREYFQEAEDGV 357

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            Y+      P +  + +   +L   + + +   S     ++  +   +  + ++
Sbjct: 358 DYLDVKARWPVWSALILYRQILDVIEKNDYDNFSMRAYVSKSKKLASLPLALLR 411


>gi|291388300|ref|XP_002710745.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 333

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/280 (25%), Positives = 118/280 (42%), Gaps = 3/280 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              + L  LR  DY+ YL  LL P   R S   L  F+ EL +V+D+        MR+Q+
Sbjct: 57  SEQYCLELLRKRDYEGYLCSLLLPAESRSSALALRAFNVELAQVKDSVSEKAIGLMRMQF 116

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           WK   E            P ++EL   V++++L  ++F+ +I+    +  +    + ++ 
Sbjct: 117 WKKTVEDIYLDNP--PHQPVAIELWKAVKRHNLTKRWFMKIIDEREKNLDDKVYCNIQEL 174

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E+YA    S L++L    L  +   A      + G AQ I   +   P H  R +++ P+
Sbjct: 175 ENYAENTQSALLYLTLETLGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRKVFLPM 233

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
           DI    G+ +E  L      ++   I   A     +L  AR   + +    FPAF+    
Sbjct: 234 DICMLHGVSQEDVLRKSQDKKVRDVIYDIASQAHLHLKHARSFHKSVPARAFPAFLQTVS 293

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            E  LK  Q   F I   S      + P  +   S +KR+
Sbjct: 294 LEDYLKKIQQVDFDIFHPSLQRRNALLPLSLYIQSWRKRY 333


>gi|21674208|ref|NP_662273.1| phytoene desaturase [Chlorobium tepidum TLS]
 gi|21647372|gb|AAM72615.1| phytoene desaturase [Chlorobium tepidum TLS]
          Length = 310

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 101/291 (34%), Gaps = 8/291 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           ++        +  +  R      YLA    P   +  +  +Y     +  + D A++ ++
Sbjct: 16  QKLSLPNAYDYCRQIARHHAKTFYLAAKFLPKRQQNPIFAMYALLRTVDDLVDLAQDKLS 75

Query: 73  -RDMRLQWWKDIFESS-----TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
              +  +   D               + S  P  +     +R Y +P +  LD+I+    
Sbjct: 76  NGQLTRKEINDSIADWKMRLRACYDGSPSNDPILMAWQDTLRHYSIPIELPLDLIDGVAM 135

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
           D    +     +   Y ++++S +  +   I       A    I   GIA  +  ++  +
Sbjct: 136 DIDFKTFETFDELYVYCYKVASVVGLMTVEIFGYSNKEALQHAID-LGIAMQLTNILRDI 194

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                R ++Y PL+ L      RE F+S   +++    +K   +   KY   A   +  +
Sbjct: 195 GEDIDRNRIYLPLEDLRRFNYSREEFMSRTMNNKFVDLMKFQIDRARKYYASADLGIPML 254

Query: 247 LPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +   A  I       +LK  + + + + +     +   +   + S  IK
Sbjct: 255 EKNSRLAVGISSRNYSDILKAIEENSYDVFTQRAYRSFYQKLSTLPSIWIK 305


>gi|78189142|ref|YP_379480.1| phytoene desaturase [Chlorobium chlorochromatii CaD3]
 gi|78171341|gb|ABB28437.1| phytoene desaturase [Chlorobium chlorochromatii CaD3]
          Length = 316

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 94/286 (32%), Gaps = 13/286 (4%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR- 73
           +       +     ++     YLA L  P   +  +  +Y     +  V D A   +   
Sbjct: 24  RSLDAAYNYCRHIAQEHAKTFYLASLFLPKEQQRPIYAIYALLRTVDDVVDMAEEKLAAG 83

Query: 74  -------DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                     L  WK   E+   G +  +  P  +     ++ Y +P +  LD+++    
Sbjct: 84  LITRADISTMLDEWKHKLEACYAGTV--ARDPIMMAWHDTLQNYTIPIELPLDLMDGVAM 141

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
           D         ++   Y ++++S +  +   +       A    I+  GIA  +  ++  +
Sbjct: 142 DIEFKPFETFEELYVYCYKVASVVGLITAEVFGYSNKEALDHAIE-LGIAMQLTNILRDV 200

Query: 187 PIHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 R ++Y PL+ L       E  +  + +D     +K   E    Y   + + +  
Sbjct: 201 GEDAANRQRIYLPLEDLRRFNYSPEELMQKKMNDNFIALMKFEIERARHYYTTSDKGIPM 260

Query: 246 ILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           +         +      ++L   + + + + S     +   +   +
Sbjct: 261 LQSRSRFGVALSSINYANILTAIEENHYDVFSKRAYRSFWQKISTL 306


>gi|297584503|ref|YP_003700283.1| Phytoene synthase [Bacillus selenitireducens MLS10]
 gi|297142960|gb|ADH99717.1| Phytoene synthase [Bacillus selenitireducens MLS10]
          Length = 283

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 95/275 (34%), Gaps = 5/275 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            ++      + +         A    P   R  +  +Y F      + D   NP   +  
Sbjct: 3   VNQAYQACRQIIEHHSKTFAKAFNHLPKEKREGVWAVYAFCRLADDIVDEGENP---EAE 59

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+ +KD F++   G I E  +   + L    +++D  +  F DMI+  + D         
Sbjct: 60  LKAFKDDFDTFVAGDIPE-QTALWIALDDAFKRFDFDHTPFYDMIKGQYMDLTKKRYESL 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y++ ++  +  +   IL  ++           G A  I  ++  +     R ++Y
Sbjct: 119 DEVLTYSYHVAGTVGLMLLPILSPDKKEELYDSAVSLGYAMQITNILRDVGEDLDRDRIY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            P +IL   G       +    DR     +  AE+   +  K   E+         P   
Sbjct: 179 LPREILTKHGYTIADLENRVLDDRFIAIWEELAEIAETHYLKGTSELNLYPLFARLPVKA 238

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             S  +++L   + +G+++        Q  +   +
Sbjct: 239 AASFYKAILNAVRRNGYQVFHERAYVTQDEKAKII 273


>gi|224827147|ref|ZP_03700243.1| squalene synthase HpnD [Lutiella nitroferrum 2002]
 gi|224600656|gb|EEG06843.1| squalene synthase HpnD [Lutiella nitroferrum 2002]
          Length = 281

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 88/260 (33%), Gaps = 6/260 (2%)

Query: 40  LLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPF 99
              P   R +++ LY F  E+  V D   +      +L WW+            +   P 
Sbjct: 23  RFLPEERRRAITALYAFCREVDDVVDECHDENVARTKLAWWRAELVRLYA---GQPQHPV 79

Query: 100 SVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILD 159
           +  L   V  Y LP +   ++I+    D              Y  R +  +  L+  I  
Sbjct: 80  TQALQPHVAAYGLPQKLLEEIIDGMEMDLDFARYDRFADLLLYCHRAAGVVGQLSAQIFG 139

Query: 160 SERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSD 219
                  L+     G+A  +  +I  +     RG++Y P++ L    +        + ++
Sbjct: 140 YTDQHT-LKYAHELGVAFQLTNIIRDVGEDARRGRIYLPVEELRRFNVPASDIQHYRETE 198

Query: 220 RISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHGFK-IVSH 277
                +    E   +Y  +A E++         P  +  +I  + L   +  G + +++ 
Sbjct: 199 AFRQLMGFQIERAEQYYRQAWEQLPKSDVKAQRPGLLMAAIYRATLAEIKLDGPQKVLNQ 258

Query: 278 SHTPNQLVRPWYMLSSSIKK 297
             +   + + W    + +  
Sbjct: 259 RLSLTPIRKLWLAWKTWVFG 278


>gi|114620977|ref|XP_001144499.1| PREDICTED: similar to putative phytoene synthase isoform 1 [Pan
           troglodytes]
          Length = 333

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 3/277 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR  DY+ YL  LL P   R S+  +  F+ EL +V+D+        MR+Q+WK 
Sbjct: 60  YCLELLRKRDYEGYLCSLLLPAESRSSVFAVRAFNVELAQVKDSVSEKTIGLMRMQFWKK 119

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             E            P ++EL   V++++L  ++ + +++    +  + +  + K+ E+Y
Sbjct: 120 TVEDIYCDNP--PHQPVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENY 177

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
           A    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI 
Sbjct: 178 AENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDIC 236

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES 262
              G+ +E FL       +   I   A     +L  AR   + +    FPAF+     E 
Sbjct: 237 MLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQTVSLED 296

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            LK  Q   F I   S      + P Y+   S +K +
Sbjct: 297 FLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY 333


>gi|87123610|ref|ZP_01079461.1| phytoene synthases [Synechococcus sp. RS9917]
 gi|86169330|gb|EAQ70586.1| phytoene synthases [Synechococcus sp. RS9917]
          Length = 315

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 102/291 (35%), Gaps = 17/291 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-- 74
             R      +   +     YL  LL PP  R ++  +Y +      + D+A         
Sbjct: 21  LERAYEACRQETAEWAKTFYLGTLLLPPEKRRAIWAIYVWCRRTDELMDSAEAQARPQAE 80

Query: 75  --MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL  W++   +   G +   +    V+    + ++    Q +LDMIE    D     
Sbjct: 81  LAERLDRWEENTRAVFAGRVGSDLDAVMVD---TLERFPQSIQPYLDMIEGQRMDLTWTR 137

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLI 183
                    Y +R++  +  +   ++  +    +                GIA  +  ++
Sbjct: 138 YPTFDDLRLYCYRVAGTVGLMTQGVMGLDPAYTTAPWSHDPNTSDAAVALGIANQLTNIL 197

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y PL+ L   G      L+G+ ++     +    E    +  ++   +
Sbjct: 198 RDVGEDRSRGRIYLPLEDLDRFGYSEADLLAGRLNEAWRDLMMFQLERARFWFARSEAGV 257

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           R++  D   P +  + +   +L   +   + + +H    ++L +   +  S
Sbjct: 258 RWLSGDARWPVWTSLRLYRGILDAIERLDYDVFNHRAYVSRLGKLLELPRS 308


>gi|18476085|gb|AAK07734.1| phytoene synthase [Oryza sativa Japonica Group]
          Length = 272

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 90/270 (33%), Gaps = 9/270 (3%)

Query: 33  YDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLI 92
              YL   L  P  R ++  +Y +      + D   +       L  W+   E   +   
Sbjct: 1   KTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKRLEDLFE--- 57

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
                 +   L   V ++ +  Q F DMIE    D +        +   Y + ++  +  
Sbjct: 58  GRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYRSFDELYLYCYYVAGTVGL 117

Query: 153 LATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           +   ++           +        GIA  +  ++  +     RG++Y PLD L   GL
Sbjct: 118 MTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAEAGL 177

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKH 266
             E    G+ +D+    +K        +  +A + + ++      P    + +   +L  
Sbjct: 178 TEEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSASRWPVLASLWLYRQILDA 237

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            + + +   +     N+  +   +  +  +
Sbjct: 238 IEANDYNNFTKRAYVNKAKKLLSLPVAYAR 267


>gi|116073944|ref|ZP_01471206.1| phytoene synthase [Synechococcus sp. RS9916]
 gi|116069249|gb|EAU75001.1| phytoene synthase [Synechococcus sp. RS9916]
          Length = 302

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 103/294 (35%), Gaps = 17/294 (5%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR-- 73
                     +         YL  LL PP  R ++  +Y +      + D+         
Sbjct: 7   NLEAAYESCRQETATWAKTFYLGTLLLPPEKRRAIWAIYVWCRRTDELMDSEEAQARPVS 66

Query: 74  --DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
               RL  W+    +  +G IA+ +    V+    + ++    Q +LDMIE    D    
Sbjct: 67  ELAERLDRWEAKTRALFEGKIADDLDAVMVD---TLERFPQSIQPYLDMIEGQRMDLTWT 123

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQL 182
                K    Y +R++  +  +   ++  ++   +                GIA  +  +
Sbjct: 124 RYPTFKDLRLYCYRVAGTVGLMTEGVMGIDQAYTTAPWSHVPNTSDAAVALGIANQLTNI 183

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           +  +     RG++Y P + L   G   E  ++G+ +D     +    E   ++  ++   
Sbjct: 184 LRDVGEDRGRGRIYLPQEDLERFGYSEEDLMAGRLNDAWRALMAFQLERAREWFARSEAG 243

Query: 243 MRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +R++  D   P +  + +   +L   +   + +  +     +L +   +  S +
Sbjct: 244 IRWLSADARWPVWTSLRLYRGILDVIEQLDYDVFQNRAYVGRLGKMLELPRSYV 297


>gi|15805888|ref|NP_294586.1| phytoene synthase [Deinococcus radiodurans R1]
 gi|6458581|gb|AAF10440.1|AE001940_4 phytoene synthase [Deinococcus radiodurans R1]
          Length = 325

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 90/284 (31%), Gaps = 8/284 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            ++   +     R      YL   L  P  R ++  +Y        + D A N   R+  
Sbjct: 35  LAQAVRYCRDLTRQHSKTFYLGSQLFSPPERAAVWAVYAACRAGDDIVDEAGNGD-RERE 93

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+ W+   +++  G  A+   P S  L     +Y +P+  F ++ E    D       D 
Sbjct: 94  LREWRSRIDAAFAGQPAD--DPISTALAWAAGRYAIPHSAFAELHEGLNMDLRGHEYRDM 151

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y  R++  +  +   I      +A+L      G A  +  ++  +     RG++Y
Sbjct: 152 DDLLLYCRRVAGVVGFMVAPISGYRGGAATLNDALQLGQAMQLTNILRDVGEDLTRGRVY 211

Query: 197 FPLDILGAVGLDRESFLSG----QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-F 251
            P  +L   GL R +          S      +     L  ++    R  +  +      
Sbjct: 212 LPQSLLDEYGLSRAALERWGQGEPLSPAYRALMTHLGGLAREWYAAGRAGIPQLDGRGPL 271

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                    E +L   +  G+         +   +   +  +  
Sbjct: 272 AVLTAARAYEGILDDLERAGYDNFGRRAYVSGRRKLLMLPQAWW 315


>gi|125606584|gb|EAZ45620.1| hypothetical protein OsJ_30288 [Oryza sativa Japonica Group]
          Length = 336

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 89/306 (29%), Gaps = 29/306 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +          ++     YLA  L  P  R ++  +Y +      + D         + 
Sbjct: 17  LNAAFDRCGEVCKEYAKTFYLATQLMTPERRRAIWAIYVWCRRTDELVDGPNASHMSALA 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPN--------------------QY 116
           L  W+   +                 L   V  + +                      Q 
Sbjct: 77  LDRWESRLDDIFA---GRPYDMLDAALSHTVATFPVDIQASTTNTMKSQEYSQYAPCVQP 133

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIK 171
           F DMIE    D          +   Y + ++  +  +   ++              +   
Sbjct: 134 FRDMIEGMRLDLTKSRYRSFDELYLYCYYVAGTVGLMTVPVMGISPDSRANTETVYKGAL 193

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G+A  +  ++  +     RG++Y P+D L   GL  +    G+ +DR    ++     
Sbjct: 194 ALGLANQLTNILRDVGEDARRGRIYLPMDELEMAGLSEDDIFDGRVTDRWRCFMRDQITR 253

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              +  +A E    +  +   P +  + +   +L   + + +   +      +  +   +
Sbjct: 254 ARAFFRQAEEGASELNQESRWPVWASLLLYRQILDEIEANDYNNFTKRAYVPKAKKIVAL 313

Query: 291 LSSSIK 296
             +  +
Sbjct: 314 PKAYYR 319


>gi|224052972|ref|XP_002297643.1| predicted protein [Populus trichocarpa]
 gi|222844901|gb|EEE82448.1| predicted protein [Populus trichocarpa]
          Length = 284

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 88/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL   L     + +   +Y +      + D     +     
Sbjct: 1   LEEAYERCRNICAEYAKTFYLGTRLMTEERQKATWAIYVWCRRTDELVDGPNAVLMSTAV 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W++  +                 L   + ++ L  + F DMIE    D+      + 
Sbjct: 61  LDRWEERLQDIFD---GRPYDMLDAALTDTISKFPLDIKPFRDMIEGMRMDTRKFRYDNF 117

Query: 137 KQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
           ++   Y + ++  +  ++  ++           +      Y GI   +  ++  +     
Sbjct: 118 QELYLYCYYVAGTVGLMSVPVMGIAAESEASAQSIYNAALYLGIGNQLTNILRDVGEDAL 177

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   GL  +   + + +D     +K        Y   A E    +     
Sbjct: 178 RGRVYLPQDELAQFGLCDQDVFARKVTDGWREFMKEQIIRARFYFNLAEEGASKLEKASR 237

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P +  + + + +L   +++ +   +      +  +   +  +  K
Sbjct: 238 WPVWSSLLVYQKILDAIEDNDYDNFTKRAYVGRTKKLLTLPLAYTK 283


>gi|147906108|ref|NP_001078962.1| hypothetical protein LOC76947 precursor [Mus musculus]
 gi|150438878|sp|A2AIL4|CH038_MOUSE RecName: Full=UPF0551 protein C8orf38 homolog, mitochondrial;
           Flags: Precursor
 gi|122890098|emb|CAM14535.1| novel protein [Mus musculus]
          Length = 333

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 3/280 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
             L+ L  LR  DY+ YL  LL P   + S S L  F+ EL +V+D+        MR+Q+
Sbjct: 57  SHLYCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQF 116

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           WK   E            P ++EL   V++++L  ++ + +I+    +  + +    ++ 
Sbjct: 117 WKKAVEDMYCDNP--PHQPVAIELWKAVKKHNLTKRWLMRIIDEREKNLDDKAYRSMQEL 174

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E+YA      L++L   +L  +   A      + G AQ I   +   P H  R Q++ P+
Sbjct: 175 ENYAENTQGSLLYLTLEVLGVKDLHA-DHAASHIGKAQGIVTCLRATPYHSSRRQVFLPM 233

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
           D+    G+ +E FL       +   +   A     +L  AR   R +  + FPAF+    
Sbjct: 234 DVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHRSVPAEAFPAFLQTVS 293

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            E  LK  Q   F I   S     ++ P  +   S +KR+
Sbjct: 294 LEDYLKKIQRVDFDIFHPSLQQKNMLLPLSLYIQSWRKRY 333


>gi|295702798|ref|YP_003595873.1| phytoene synthase [Bacillus megaterium DSM 319]
 gi|294800457|gb|ADF37523.1| phytoene synthase [Bacillus megaterium DSM 319]
          Length = 282

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 96/267 (35%), Gaps = 5/267 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +        +++     Y A  + P   R ++  +Y F  ++  + D   NP   ++ 
Sbjct: 6   LDKAYNQCEEIIKENSKTFYKAFSMLPSKQRKAVWAVYAFCRQVDDIVDEGCNP---EIE 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQ ++  F     G +    +   V L ++  QY++  Q F DMI     D         
Sbjct: 63  LQQFESEFARFKNGELLNESA-MWVALRNVFEQYEMNVQAFDDMITGQRMDLVKKEYDTL 121

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            + + Y++ ++S +  +   IL    +          GIA  +  ++  +     RG++Y
Sbjct: 122 DEVKTYSYHVASTVGLMLLPILAPTTHKELEEEAIALGIAMQLTNILRDVGEDLERGRIY 181

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            P D++ + G  R    +   +       +  A+    Y  K  + +         P   
Sbjct: 182 LPKDLMNSYGYMRMLLENRWVTAEFIEMWEHLAKEAEMYYIKGLQSIHKYPVASRLPLTG 241

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPN 282
              +  ++L   +   +++ +  H   
Sbjct: 242 AAHLYRAILDKIRKENYEVFTEKHFVT 268


>gi|194289496|ref|YP_002005403.1| phytoene synthetase, trans-isoprenyl diphosphate synthase
           [Cupriavidus taiwanensis LMG 19424]
 gi|193223331|emb|CAQ69336.1| phytoene synthetase, Trans-Isoprenyl Diphosphate Synthase
           [Cupriavidus taiwanensis LMG 19424]
          Length = 278

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 89/277 (32%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +    +       Y + L  P   R +++ LY +  E+  V D   +      +L WW+
Sbjct: 5   QYCQEKVAQSGSSFYYSFLFLPAERRRAITALYAWCREVDDVVDDTHDAGLAHQQLDWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P +  L   V    L      +++E    D       D      
Sbjct: 65  AELRRLFD---GAPTHPTTQALQPHVASAGLSQAEMAEVLEGMEMDLTQTRYLDEAGLSR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  L+  +         L   +  G +  +  ++  +     RG++Y P++ 
Sbjct: 122 YCHCVAGVVGTLSARLFGYTDPQT-LVFAEKLGQSLQLVNILRDVGEDARRGRIYLPVNT 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L G++S R    ++  A        +A   +            +  +I 
Sbjct: 181 LQQFQVPASEILKGEHSGRFVALMQYHAGRARALYQEALALLPRQDRRAQRAGLLMGAIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   F++++       L + W    + ++ 
Sbjct: 241 HALLDELEASQFQVLNQRIALTPLRKLWIAWKTWVRN 277


>gi|47779181|gb|AAT38473.1| chloroplast phytoene synthase precursor [Chlamydomonas reinhardtii]
          Length = 312

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 17/295 (5%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +  +      +   +     YL   L  P    ++  +Y +      + D          
Sbjct: 13  VLDQAYEKCGQVTSEYAKTFYLGTQLMTPAQAKAVWAVYVWCRRTDELVDGPNASKITPK 72

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++  E+       +        L     ++ L  Q F DMIE    D        
Sbjct: 73  ALDRWEERLEALFD---GKPYDELDAALTDTAAKFPLHIQPFRDMIEGMRMDLVKSRYET 129

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y +R++  +  +   I+        +     R     G A  +  ++  +    
Sbjct: 130 FDELYEYCYRVAGTVALMCMPIMGIEPTYKGQLEPVYRAALALGTANQLTNILRDVGEDA 189

Query: 191 -HRGQLYFPLDILGAVGLDRESFLSGQN-------SDRISLAIKIFAELGLKYLFKAREE 242
             R ++Y PLD L   G+  +  L+G +        DR    +        +Y   A   
Sbjct: 190 YQRNRIYVPLDELDKYGISEKELLTGLHAPTTGAMDDRWRNFMHFQITRARQYFTDAEGG 249

Query: 243 MRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +  + P    P +  + +   +L   + + +   S      +  +   +  +  +
Sbjct: 250 VDLLAPQARWPVWSALILYRQILDAIEANDYDNFSKRAYVPKWRKMVSLPVAYTR 304


>gi|298709404|emb|CBJ31337.1| Phytoene synthase; chloroplast precursor [Ectocarpus siliculosus]
          Length = 519

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 97/299 (32%), Gaps = 9/299 (3%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
                +   + ++      R         YL      P+ R ++  +Y +      + D 
Sbjct: 181 PAELSRRRAVLNQAYQECERITGIFAKTFYLGTKFMSPVARKAVWAIYVWCRRTDDIVDG 240

Query: 67  ARNPITRDMRLQW-WKDIFESSTKGLIAESISPFSVELLSIVRQYDL-PNQYFLDMIEAH 124
            R  +     +Q    D           +      + L+ +   Y   P   F DMI+  
Sbjct: 241 PRAMVRGKKSMQKDLTDWATRLENVWEGKPKDALDLALVDVRENYPSLPIAPFKDMIDGM 300

Query: 125 FFD---SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER---YSASLRVIKYAGIAQF 178
             D      +     ++ E Y +R++  +  +   IL +        +       GIA  
Sbjct: 301 IMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQ 360

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           +  ++  +     RG++Y PL+ L   G+D E+ ++G         ++        Y  +
Sbjct: 361 LTNILRDVGEDAVRGRIYLPLEDLEKFGVDPENIMNGILDSNYKELMRYQIARARFYYKQ 420

Query: 239 AREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           A   +  + P+   P    + +   +L   + + +         ++  +   +  S  K
Sbjct: 421 AARGIPMLSPEGRLPVQASLDMYGKILTAIEGNNYDNFRKRAYISKTEKLLTLPFSYAK 479


>gi|148240605|ref|YP_001225992.1| phytoene synthase [Synechococcus sp. WH 7803]
 gi|147849144|emb|CAK24695.1| Phytoene synthase [Synechococcus sp. WH 7803]
          Length = 313

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 98/289 (33%), Gaps = 11/289 (3%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
                               +     YL  +L P   R ++  +Y +      + D+   
Sbjct: 12  PETTPLSLKEAFERCRAETEEWAKTFYLGTMLMPLEKRQAIWAIYVWCRRTDEIMDSTEA 71

Query: 70  -PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
               ++  L         +         +     ++  +++Y  P Q +LDMIE    D 
Sbjct: 72  LSKPKEQLLDELDAWELHTRAMFKGHIETWLDKVMVDTIQRYSQPLQPYLDMIEGMRMDL 131

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFI 179
            N         + Y +R++  +  ++  ++  +    S    +           GIA  +
Sbjct: 132 TNLRYKTFSDLQLYCYRVAGTVGLMSEQVMGIDDSYTSAPWSEEAETSGAAVALGIANQL 191

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
             ++  +     RG++Y P+D +   G      L G  +D+    +        ++  ++
Sbjct: 192 TNILRDVGEDRQRGRIYLPMDEINDFGYSEAELLDGVLNDQWRKLMAFQIHRAREWFKRS 251

Query: 240 REEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
              +R++ PD   P +  + +   +L   +++ + + ++     +  + 
Sbjct: 252 ESGVRFLAPDARWPVWTSLRLYRGILSRIEDNDYDVFNYRAFVPRYRKL 300


>gi|332112677|gb|EGJ12470.1| squalene synthase HpnD [Rubrivivax benzoatilyticus JA2]
          Length = 282

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 103/283 (36%), Gaps = 9/283 (3%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
           + +V +         Y A L  PP  R +++  Y F  E+  V D  ++P     +LQWW
Sbjct: 4   AEYVQKRAAGSGSSFYYAFLFLPPPERAAITAFYAFCREVDDVVDEMQDPSVAARKLQWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +++          P +  L+ +  ++ +   +   ++E    D       D     
Sbjct: 64  RGEVDAAFA---GAPTHPVTQALMPLAARFRIEPAHLHAIVEGCQVDLEQTRFLDFPALS 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y   ++  +  +A  I        ++R     G A  +  +I  +     RG++Y P+ 
Sbjct: 121 RYCHLVAGVVGEVAANI-FGRSSEQTVRYAHTLGRALQLTNIIRDVGDDARRGRIYLPVS 179

Query: 201 ILGAVGLDRESFLSGQ----NSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFI 255
            L    +     L  +     S+R +  ++  AE       +A   +            +
Sbjct: 180 ELQRFDVKAHEILKRESPWGYSERFTALMRFQAERAHATYDEALALLPEADRAKQKTGLM 239

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             +I  ++L+  +  GF+++    +   L + W    + +  R
Sbjct: 240 MANIYRALLREIEAGGFQVLHQRTSLTPLRKLWIAARTHVLAR 282


>gi|1916990|gb|AAB51287.1| phytoene synthase [Dunaliella bardawil]
 gi|68271229|gb|AAY89105.1| phytoene synthase [Dunaliella bardawil]
          Length = 425

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 94/304 (30%), Gaps = 17/304 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
            +  R +                +     YL   L  P+    +  +Y +      + D 
Sbjct: 116 PRTLRWQGGSLEGAYERCGAVCSEYAKTFYLGTQLMTPVQARCIWAIYVWCRRTDELVDG 175

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                     L  W++  E+  +    +        L   + +Y L  Q F DMIE    
Sbjct: 176 PNASKITPQALDRWEERLEAMFQ---GKPYDELDAALTDTLSKYPLEIQPFRDMIEGMRM 232

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQ 181
           D +    +   +   Y +R++  +  +   ++              R     G A  +  
Sbjct: 233 DLFKSRYYTFDELYEYCYRVAGTVGLMTMPVMGVDPSYKGPVDKVYRAALALGTANQLTN 292

Query: 182 LICQLPIHYH-RGQLYFPLDILGAVGLDRESFLS-------GQNSDRISLAIKIFAELGL 233
           ++  +      R ++Y PLD +   G+  E   +       G+  +R    +K   +   
Sbjct: 293 ILRDVGEDIRERDRIYLPLDEIKQFGMTEEEVKACIHRPTQGKVDERWRSFMKFQIKRAR 352

Query: 234 KYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            Y  +A + +  +      P +  + +   +L   + + +   S      +  +   +  
Sbjct: 353 DYFQEAEDGVDCLDVKARWPVWSALILYRQILDSIEKNDYDNFSMRAYVPKAKKFTSLPM 412

Query: 293 SSIK 296
           +  +
Sbjct: 413 ALFR 416


>gi|157427904|ref|NP_001098859.1| phytoene synthase-like precursor [Bos taurus]
 gi|182627640|sp|A7YVD7|CH038_BOVIN RecName: Full=UPF0551 protein C8orf38 homolog, mitochondrial;
           Flags: Precursor
 gi|157278944|gb|AAI23432.1| C14H8ORF38 protein [Bos taurus]
 gi|296480415|gb|DAA22530.1| hypothetical protein LOC523017 precursor [Bos taurus]
          Length = 333

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 3/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            + L  LR  DY+ YL  LL P   R S   L  F+ EL +++D+        MR+Q+WK
Sbjct: 59  RYCLELLRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKTIGLMRMQFWK 118

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +            P ++EL   VR+++L  ++ + +I+    +  + +  + ++ E+
Sbjct: 119 KTVDDIYSDNP--PHQPVAIELWKAVRRHNLTKRWLMKIIDEREKNLDDKAYRNIQELEN 176

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           YA    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI
Sbjct: 177 YAENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDI 235

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
               G+ +E FL       +   +   A     +L  AR   R I    FPAF+     E
Sbjct: 236 CMLHGVSQEDFLRKSQDRNVRDVVYDVASQAHLHLKHARSFHRSIPVKAFPAFLQTVALE 295

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             LK  Q   F +   S      + P  +   S +KR+
Sbjct: 296 DYLKKIQQVDFDLFHPSLQRKNTLLPLSLYIQSWRKRY 333


>gi|212640023|ref|YP_002316543.1| phytoene/squalene synthetase [Anoxybacillus flavithermus WK1]
 gi|212561503|gb|ACJ34558.1| Phytoene/squalene synthetase [Anoxybacillus flavithermus WK1]
          Length = 285

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 91/276 (32%), Gaps = 6/276 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
              +                Y A  L PP  R ++  +Y F   +  + D    P     
Sbjct: 4   NIKQAYAQCEAVTAHHSKTFYRAFSLLPPYDRQAIWAIYAFCRRIDDIVDEGEKPH---E 60

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           +LQ ++  ++S   G   +      + L  +  +YD+ ++ F  MIE    D        
Sbjct: 61  QLQQFEKQWQSFLAGHTED--DFMWIALRDVFSRYDMDDEPFWHMIEGQKMDLTVHRYDT 118

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
             Q   Y + ++S +  +   IL               G A  +  ++  +     RG++
Sbjct: 119 FSQLLRYCYCVASTVGLMLLPILAPNAQDELKESAIALGEAMQLTNILRDIGEDVTRGRI 178

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P +++   G++ +    GQ +       +  A+        A +           A  
Sbjct: 179 YIPREVMERYGVNEQHIFFGQVTSSFIDLWEHLAKEAENRYDDAEKMFFLYPLSARLAVK 238

Query: 256 -PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
               + +S+L   +   + + +     ++  +   +
Sbjct: 239 GAALMYKSILHAVREQQYDVFTTRAFVSEERKKALL 274


>gi|258652701|ref|YP_003201857.1| Phytoene synthase [Nakamurella multipartita DSM 44233]
 gi|258555926|gb|ACV78868.1| Phytoene synthase [Nakamurella multipartita DSM 44233]
          Length = 293

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 30/288 (10%), Positives = 70/288 (24%), Gaps = 4/288 (1%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-- 70
           ++++            R      Y    L P   R  +  +Y        + D       
Sbjct: 6   QDRLLQDGYRRCAEITRRNGTTYYWGVQLLPRERRRHVHAVYALCRLADDIVDDQAATAG 65

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
            +         D      + +   S  P    +   VR   +  + F     A   D   
Sbjct: 66  RSAAEIGSQLADFAADFRRAVTDGSADPVLAAVGHTVRTVGIAPECFDRFYGAMAMDLTT 125

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                      Y    ++ +  +   +L      A     +  G A      +  +    
Sbjct: 126 TRYETWDDLLGYMEGSAAVIGEMMLPMLQPLGPEAFAP-ARALGFAFQYTNFLRDVAEDL 184

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD- 249
            RG++Y P D L   G+        + + +    +    +   +    A   + ++ P  
Sbjct: 185 DRGRIYLPQDQLRRFGVKPVDLGRRRVTPQWRAFLAHEIDRARELYRAADRGLPFLPPRS 244

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                    +   +L   +   + +           +        +  
Sbjct: 245 ARCVGTARVLYSRILDRIEAADYDVFRTRARVPTWRKAGTAARILVTG 292


>gi|119713699|gb|ABL97749.1| phytoene/squalene synthetase [uncultured marine bacterium
           EB0_41B09]
          Length = 284

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 56/271 (20%), Positives = 106/271 (39%), Gaps = 6/271 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +  ++       A +      R +L+ LY F  E+  + D   +      +L WW
Sbjct: 4   QEYCKQKTKESHSSFLTAFIFLSKEKREALTALYAFCREVDDIADECLDHEIASKKLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +D  +   K        P S  L   +  ++L   YF+++I+    D   +     +Q +
Sbjct: 64  RDEIDRLFK---DAPQHPVSKALYPFIEHFNLSKNYFIEIIDGMEMDVKFNRYESFEQLQ 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y +R++S +  L+  I   +  +  L   K  GIA  +  +I  L     RG++Y PLD
Sbjct: 121 LYCYRVASSVGILSAHIFGYKNKNT-LTFAKNLGIALQLTNIIRDLGEDARRGRIYIPLD 179

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            L  + +  E  +S +NSD+I   ++   +  LK+   A E +            I  +I
Sbjct: 180 ELKKLSVSEEEIISLKNSDKIKKLVQNQVDRALKFYSLAIETLPAEDKKSQKIGLIMGNI 239

Query: 260 TESVLKHAQN-HGFKIVSHSHTPNQLVRPWY 289
              +L      +  KI++         +   
Sbjct: 240 YYVLLNEILKDNPEKILNQKTILPGFRKLRI 270


>gi|254504471|ref|ZP_05116622.1| Squalene and phytoene synthases superfamily [Labrenzia alexandrii
           DFL-11]
 gi|222440542|gb|EEE47221.1| Squalene and phytoene synthases superfamily [Labrenzia alexandrii
           DFL-11]
          Length = 283

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 2/278 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            + D       +R  D DRYL+ LL+P  +R  L  LY F+ E+ R+R+    P+  ++R
Sbjct: 1   MAEDFEHAADVVRQYDKDRYLSALLAPEDHRPGLMALYGFNAEISRIREIVSEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  E ++ G +    +P +  L   + +Y LP    + M EA  FD YND + + 
Sbjct: 61  LQWWRDFLEGTSHGAVD--GNPVASALAQTIDRYKLPKNGLIAMTEARIFDLYNDPMPNL 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y     S LI LA  +L++   + +     +AG+A  +  L+  LP H  R Q++
Sbjct: 119 NDLEGYTGETVSGLIQLACWVLNNGEDTGTATAAGHAGVAYGMTGLMRALPWHASRHQMF 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L   G+D  +   G+ +  ++ A+         ++ + ++    +      AF+P
Sbjct: 179 LPKDVLDRHGVDLRTVFKGEATPELAAALSEMRAHVRHHMSRVKQAASDVPDTCRAAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           +S+ E  LK  +   F  +      +QL R W +  +S
Sbjct: 239 LSLVEPFLKKMEAADFNPLKDVAELSQLRRQWILWRAS 276


>gi|87308180|ref|ZP_01090322.1| phytoene synthase-related protein [Blastopirellula marina DSM 3645]
 gi|87289262|gb|EAQ81154.1| phytoene synthase-related protein [Blastopirellula marina DSM 3645]
          Length = 319

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 99/292 (33%), Gaps = 5/292 (1%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR 68
           N++ E    +  + +  +  +    +  +A  L P   R   + +Y +      + D   
Sbjct: 16  NSQHEPCSLAAATDYCQQLTKSHYENFTVASWLLPQELRPHFAHVYAYCRWSDDLADEVG 75

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +       L WW+   ++  +G       P  V L   +RQ+++P +   D++ A   D 
Sbjct: 76  DDARSLQLLAWWRSELDACYRGQT---WHPVFVALAETIRQFEIPIEPLADLLTAFEQDQ 132

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                   +Q   Y    ++ +  L   +  S        +         +      +  
Sbjct: 133 RVKRYATHEQLLTYCENSANPVGRLVLYLGRSSHAETVK-LSDSICTGLQLANFWQDVAR 191

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            Y  G++Y P +     G+  E   S   +      ++   E   +YL   R  M  I P
Sbjct: 192 DYAIGRIYLPEEDRQKFGVTEEMLASSVATPPFRQLLQYEVERAEQYLHAGRPLMDQIAP 251

Query: 249 DVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +     + ++   ++ +  +   F ++    T  +  +   +L    ++ F
Sbjct: 252 QLRLDIELFLAGGLAICQAIRRQNFDVLKSRPTVGKWRKLQLLLGCLTRRTF 303


>gi|116071507|ref|ZP_01468775.1| phytoene synthase [Synechococcus sp. BL107]
 gi|116065130|gb|EAU70888.1| phytoene synthase [Synechococcus sp. BL107]
          Length = 299

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 98/294 (33%), Gaps = 11/294 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                        +     YL  LL P   R ++  +Y +      + D+          
Sbjct: 5   LDGAYEACRLETAEWAKTFYLGTLLLPLEKRRAIWAIYVWCRRTDELMDSVEAQSRSVEE 64

Query: 77  LQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L    D +E  T+        +     +   + ++    Q +LDMIE    D        
Sbjct: 65  LAERLDCWEQQTRDLFNGRVSNDLDAVMADTLERFPQDIQPYLDMIEGQRMDLTWTRYPT 124

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLICQL 186
            +  + Y +R++  +  +   ++  ++   S                GIA  +  ++  +
Sbjct: 125 FEDLKLYCYRVAGTVGLMTQGVMGVDQAYTSAPWSDSPDTSDAAVALGIANQLTNILRDV 184

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG++Y P + L   G      ++G+ ++     +    E   ++  ++   +R++
Sbjct: 185 GEDRGRGRIYLPQEDLDRFGYSESDLMAGKLNEAWRELMAFQLERAREWFSRSESGVRWL 244

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             D   P +  + +   +L   +   + + +      ++ +   +  S    +F
Sbjct: 245 SGDARWPVWTSLRLYRGILDAIERIDYDVFNRRAYVGKVYKLLDLPRSYALAQF 298


>gi|257865705|ref|ZP_05645358.1| squalene desaturase [Enterococcus casseliflavus EC30]
 gi|257872039|ref|ZP_05651692.1| squalene desaturase [Enterococcus casseliflavus EC10]
 gi|257799639|gb|EEV28691.1| squalene desaturase [Enterococcus casseliflavus EC30]
 gi|257806203|gb|EEV35025.1| squalene desaturase [Enterococcus casseliflavus EC10]
          Length = 307

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 99/286 (34%), Gaps = 10/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP------ 70
           +  D L+    ++    + + A    P     ++  +Y F        D  ++P      
Sbjct: 12  YDNDFLYCEAIIKKHSKNFHTAFSQLPKDKSRAVYAVYAFCRRADDAVDEKQDPLLIEAM 71

Query: 71  --ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                +M+ Q   D  +        +        L    +Q+DL  Q F D++     D 
Sbjct: 72  KKRLEEMQKQVSDDTIDLPQAVKEEDPDEAIWRALTLSFQQFDLQFQPFFDLLVGQKQDL 131

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                   K+   Y++ ++  +  +   I  S+  +A  +     G A     ++  +  
Sbjct: 132 DFQQPTSEKELSDYSYYVAGSVGLMLLPI-LSQAAAAIQKPAIKLGEAMQRTNILRDIGE 190

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
               G++Y P  +L    L RE+  +G  + +     +  A+L      ++   M  I  
Sbjct: 191 DLRMGRIYLPQTVLAQYNLSREALAAGNQNPQFIEMWEHEAQLAETLYQESFVMMPQIDE 250

Query: 249 DVFPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           D   A +  ++    +L   + + +++ +      +  +   + ++
Sbjct: 251 DCREALLAAALIYREILTVIRKNNYQVFAEKTAVPKQRKIQLLFTA 296


>gi|163789581|ref|ZP_02184019.1| phytoene synthase [Carnobacterium sp. AT7]
 gi|159875113|gb|EDP69179.1| phytoene synthase [Carnobacterium sp. AT7]
          Length = 286

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 91/280 (32%), Gaps = 4/280 (1%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
            +++   +D  +    ++      Y A    P     ++  +Y F        D A    
Sbjct: 4   NKQETIKQDYQYCENIIKQHSKSFYYAFSRLPKAKAQAIFAIYAFCRRADDEVDLAETAQ 63

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
            +   ++  +       KG   +   P    L  +  +YD+  Q F   +     D    
Sbjct: 64  EQLAAVETLEKELALFEKGQPID--HPAWRALTDVFERYDMDIQPFYYQLTGQKMDIQFS 121

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                   E Y F ++  +  +   +L SE      +     G+A  +  ++  +   + 
Sbjct: 122 MPETMSDLEKYCFYVAGSVGLMLLPVLASETDKDLTQTAVNLGLAMQLTNILRDIGEDFQ 181

Query: 192 R-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
             G++Y P+  L       +     + +D+     +  A+   +     + + RY   D 
Sbjct: 182 NIGRVYIPISELEKENYSIQELKEKKVNDKFIRIWERLAQRAEELYDNIQSDYRYFDEDS 241

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
             P  +  +I   +L   + + +   +  +  +++     
Sbjct: 242 RFPVELSANIYRGLLNAVRKNKYDCFTKRNYVSKMEMQRI 281


>gi|257875337|ref|ZP_05654990.1| squalene desaturase [Enterococcus casseliflavus EC20]
 gi|257809503|gb|EEV38323.1| squalene desaturase [Enterococcus casseliflavus EC20]
          Length = 307

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 98/286 (34%), Gaps = 10/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP------ 70
           +  D L+    ++    + + A    P     ++  +Y F        D  ++P      
Sbjct: 12  YDNDFLYCEAIIKKHSKNFHTAFSQLPKDKARAVYAVYAFCRRADDAVDEKQDPLLIEAM 71

Query: 71  --ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                +M+ Q   D  +        +        L    +Q+DL  Q F D++     D 
Sbjct: 72  KKRLEEMQKQVSDDAIDLPQAVKEEDPDEAIWRALTLSFQQFDLQFQPFFDLLVGQKQDL 131

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                   K+   Y++ ++  +  +   I  S+  +A        G A     ++  +  
Sbjct: 132 DFQQPTSEKELSDYSYYVAGSVGLMLLPI-LSQAAAAIQEPAIKLGEAMQRTNILRDIGE 190

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
               G++Y P  +L    L RE+  +G  + +     +  A+L      ++   M  I  
Sbjct: 191 DLRMGRIYLPQTVLAQYNLSREALAAGNQNPQFIEMWEHEAQLAETLYQESFVMMPQIDE 250

Query: 249 DVFPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           D   A +  ++    +L   + + +++ +      +  +   + ++
Sbjct: 251 DCREALLAAALIYREILTVIRKNNYQVFAEKTAVPKQRKIQLLFTA 296


>gi|126322483|ref|XP_001379587.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 332

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 6/296 (2%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           +  T ++R E      +  + +  LR  DY+ YL CLL P   R S   L  F+ EL +V
Sbjct: 43  RRATASSRTE---VPGNDRYCVELLRKRDYEGYLCCLLLPTEARSSAFALRAFNAELAQV 99

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
           +D+        MR+Q+W+   E            P ++EL   V++++L  ++ + +I+ 
Sbjct: 100 KDSISQKTIGQMRMQFWRKAVEDMYSDNP--PHQPVAIELWKAVKRHNLTKRWLVKIIDE 157

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
              +  + +  + ++ E YA    S L++L   +L      A      + G AQ I   +
Sbjct: 158 REKNLDDKAYRNIQELEAYAENTQSSLLYLTLEVLGVRNVHA-DHAASHIGKAQGIITCL 216

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
              P H  R +++ P+DI    G+ +E FL       +   I   A  G  +L  AR   
Sbjct: 217 RATPYHSSRRKVFLPMDICMLHGVSQEDFLRKNQDKNVRDVIYDIASQGHLHLIHARSFQ 276

Query: 244 RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + +    FPAF+     E  L+  Q   F +          +   ++   S KK +
Sbjct: 277 KSVPVKAFPAFLQTVALEDYLEKIQKVDFDVFHPRLQQKNPLLALHLYIRSWKKTY 332


>gi|301782423|ref|XP_002926630.1| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 356

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 3/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            + L  LR  DY+ YL  LL P   R S   L  F+ EL +V+D+        MR+++WK
Sbjct: 82  RYCLELLRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQVKDSVSEKTIGLMRMKFWK 141

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +            P ++EL   V++++L  ++ + +I+    +  + +  + ++ E+
Sbjct: 142 KTVDDIYCDNP--PQQPVALELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELEN 199

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           YA    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI
Sbjct: 200 YAENTQSSLLYLTLEILGVKDLRA-DHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDI 258

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
               G+ +E FL       +   I   A     +L  AR   + +    FPAF+     E
Sbjct: 259 CMLHGVSQEDFLRKNQDKNVRDVIYDIASQAHLHLKHARSFHKSVPVKAFPAFLQTVALE 318

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             LK  Q   F I   S      + P  +   S +KR+
Sbjct: 319 DYLKKIQQVDFDIFHPSLQQKNTLLPLSLYIQSWRKRY 356


>gi|149410532|ref|XP_001505256.1| PREDICTED: similar to 5, 10-methenyltetrahydrofolate synthetase
           [Ornithorhynchus anatinus]
          Length = 304

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 3/271 (1%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R  DY+ YL  LL P  YR S   L  F+ EL +V+D         MR+Q+WKD  E   
Sbjct: 37  RKRDYEGYLCSLLLPSEYRNSAFALRAFNVELAQVKDAVSEKTIGLMRMQFWKDAVEDIY 96

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +        P ++EL   V++++L  ++ + +I+    +  + +  +  + E YA    S
Sbjct: 97  RDNP--PHQPVAIELWKAVKRHNLTKRWLMRIIDEREKNLDDKAYSNIHELETYAENTQS 154

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            L++L   +L  +   A      + G AQ I   +   P H  R +++ P+DI    G+ 
Sbjct: 155 SLLYLILEMLGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRKVFLPVDICMLHGVS 213

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQ 268
           +E FL       +   I   A     +L  AR   + +    FPAF+   + E  LK  Q
Sbjct: 214 QEDFLRKNREKNVRDVIYDIASQAHIHLEHARSFRKNVPVKTFPAFLQTVVLEDFLKKIQ 273

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              F +   S      + P  +   S KK +
Sbjct: 274 KVDFDVFHPSLQQKNTLLPLLLYIRSWKKTY 304


>gi|93007844|gb|ABE97388.1| phytoene synthase [Dunaliella sp. 336]
 gi|93007846|gb|ABE97389.1| phytoene synthase [Dunaliella sp. 336]
          Length = 425

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 95/294 (32%), Gaps = 17/294 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                       ++     YL   L  P+    +  +Y +      + D           
Sbjct: 128 LEAAYERCGAVCQEYAKTFYLGTQLMTPVQARCIWAIYVWCRRTDELVDGPNASKITPQA 187

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W++  +   +             L   + ++ L  Q F DMIE    D +       
Sbjct: 188 LDRWEERLDGMFQ---GRPYDVLDAALTDTISKFPLEVQPFRDMIEGMRMDLFKSRYQTF 244

Query: 137 KQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
            +   Y +R++  +  +   ++  +           +     G A  +  ++  +     
Sbjct: 245 DELYEYCYRVAGTVGLMTVPVMGVDPNYKGPLDKVYKAALALGTANQLTNILRDVGEDIR 304

Query: 192 -RGQLYFPLDILGAVGLDRESFLS-------GQNSDRISLAIKIFAELGLKYLFKAREEM 243
            R ++Y PLD L   G+  +   +       G+  +R    +K   +   +Y  +A + +
Sbjct: 305 ERDRIYLPLDELHQFGISEDEVRAGIHKPSQGKVDERWRKFMKFQIQRAREYFQEAEDGV 364

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            Y+      PA+  + +   +L   + + +   S     ++  +   +  + ++
Sbjct: 365 DYLDVKARWPAWSALILYRQILDVIEKNDYDNFSMRAYVSKSKKLASLPLALLR 418


>gi|318040611|ref|ZP_07972567.1| phytoene synthase [Synechococcus sp. CB0101]
          Length = 307

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 99/288 (34%), Gaps = 11/288 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    +   +     YL  LL PP  R ++  +Y +      + D+       +  
Sbjct: 13  LEEAYEACRQETAEWAKTFYLGTLLMPPAKRRAIWAIYVWCRRTDELMDSPEAMTRPEAE 72

Query: 77  LQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L    D +E  T+              +   + +Y  P Q +LDMIE    D        
Sbjct: 73  LALRLDAWERRTRELFAGTVRDGLDRVMADTIERYPQPIQPYLDMIEGMRMDLTTHRYAT 132

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLICQL 186
            +Q + Y +R++  +  +   ++  +    S                GIA  +  ++  +
Sbjct: 133 FEQLKLYCYRVAGTVGLMTQEVMGIDPAYTSAPWSHPPDTSEAAVALGIANQLTNILRDV 192

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG++Y P + L   G   E  ++G  +D     ++   +    +  ++   +R++
Sbjct: 193 GEDRGRGRIYLPQEDLERFGYSEEELMAGTLNDSWRELMRFQLQRARDWFARSEAGVRWL 252

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            PD   P +  + +   +L   +   + + +H        +   +  S
Sbjct: 253 APDARWPVWASLRLYRGILDVIEELDYDVFNHRAYVPTSGKFLDLPRS 300


>gi|94984630|ref|YP_603994.1| squalene/phytoene synthase [Deinococcus geothermalis DSM 11300]
 gi|94554911|gb|ABF44825.1| Phytoene synthase, CrtB [Deinococcus geothermalis DSM 11300]
          Length = 298

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 82/287 (28%), Gaps = 4/287 (1%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
           +  + +  +  +       R       L     P   R ++  +Y          D    
Sbjct: 8   SPTDSRPPAAAARHCWEVTRQHSRTFSLGSRFFPAGQREAVWAVYAACRAGDDSVDECHG 67

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                  L  W    +++  G       P    L   V  + +P   F ++ E    D  
Sbjct: 68  -NEAKQALAAWWARVQAAFAGRPGP--HPIDTALAWAVSHWPIPLAAFEELHEGLRMDLE 124

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                D +    Y  R++  +  +   I        +LR     G A  +  ++  +   
Sbjct: 125 GYHYRDLEDLTLYCRRVAGVVGFMIAPICGYSGGEDTLRRALRLGQAMQLTNILRDVGED 184

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D+L   G+ R +   G+ +      ++  + L   +  + R  +  +   
Sbjct: 185 LERGRVYLPEDLLREYGVTRAALEEGRVTPGYRALMRDLSALARAWYAEGRAGIPCLRGR 244

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                       E +L       F         +   +   +  +  
Sbjct: 245 ARIGVQAAARAYEGILDDLARGDFDNFRRRAHVSGPRKLLMLPQAWW 291


>gi|114776340|ref|ZP_01451385.1| Squalene/phytoene synthase [Mariprofundus ferrooxydans PV-1]
 gi|114553170|gb|EAU55568.1| Squalene/phytoene synthase [Mariprofundus ferrooxydans PV-1]
          Length = 291

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 96/277 (34%), Gaps = 5/277 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           +     R      + A +  P   R ++  LY F  E+  V D          +L +W++
Sbjct: 6   YCRDKTRGSGSSFFYAFMFLPEDQRRAMMALYAFCREVDDVADEVSEQHVALAKLGFWRE 65

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               +      ++  P   EL      + +  +  L++++    D              Y
Sbjct: 66  ELGRAFA---GKAQHPVGHELYWCAAHFPISEELLLEILDGMQTDVLGKPFVKQADLSLY 122

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
            +R++  +  L+  +    +  +      + G A  +  ++  L      G++Y P D  
Sbjct: 123 IYRVAGVVGLLSIEVFGYTQRKSRDFAT-HLGEALQLTNILRDLADDAAIGRIYIPQDAR 181

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITE 261
               L  ++F SG  S+ +   ++ + E   +    A   +     +   P+ +  +I  
Sbjct: 182 SRYQLSDQAFKSGLMSESMQQLLQEYGEKAEQAYRTAIATLPPEDRESLRPSIVMGAIYY 241

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           + L+  + +GF +           + W    +   +R
Sbjct: 242 TYLRRLRQNGFDVWQQPVRILPARKIWVAWRAWRHER 278


>gi|94968772|ref|YP_590820.1| squalene/phytoene synthase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550822|gb|ABF40746.1| Squalene/phytoene synthase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 293

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 91/279 (32%), Gaps = 5/279 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +    +  R       +  +     P         +Y +      + D   +       
Sbjct: 14  LAEAQAYCKRLATSHYENFSVVTWFLPKHLHQQFFNVYAYCRISDDLGDEVGDTQLSLKL 73

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+   ++           P  V L   VR++++P   F D++ A   D         
Sbjct: 74  LDEWEHELDACYD---GTPRHPVFVALRETVREFEIPKHEFSDLLIAFRQDQTITRFPTF 130

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y    ++ + HL   +   +      +   Y   A  +      + + Y +G++Y
Sbjct: 131 DDVLAYCKYSANPVGHLVLYLCGYKDAE-RQQFSDYTCTALQLANFWQDVSVDYGKGRIY 189

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFI 255
            PLD +   G+  +   + +++ +    +K       ++  K    ++ +  +      +
Sbjct: 190 LPLDSMQKFGVSEDDIANRRSTPQFLELMKFEVARAREWFAKGLPLVKMVNRELALDVEL 249

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             +    +L   +  G+ ++      ++  + W +L ++
Sbjct: 250 FSNGGLEILNAIERQGYDVLKSRPVISKPKKLWLVLRAA 288


>gi|325569657|ref|ZP_08145704.1| phytoene synthase [Enterococcus casseliflavus ATCC 12755]
 gi|325157213|gb|EGC69378.1| phytoene synthase [Enterococcus casseliflavus ATCC 12755]
          Length = 307

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 100/286 (34%), Gaps = 10/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM- 75
           +  D L+    ++    + + A    P     ++  +Y F        D  ++P+  +  
Sbjct: 12  YDNDFLYCEAIIKKHSKNFHTAFSQLPKDKARAVYAVYAFCRRADDAVDEKQDPLLIEAM 71

Query: 76  --RLQWWK-----DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
             RL+  +     D  +        +        L    +Q+DL  Q F D++     D 
Sbjct: 72  KKRLEEIQELLTGDAIDLPQAIKEEDPDEAIWRALTLSFQQFDLQFQPFFDLLVGQKQDL 131

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                   K+   Y++ ++  +  +   I  S+  +A        G A     ++  +  
Sbjct: 132 DFQQPTSEKELSDYSYYVAGSVGLMLLPI-LSQTAAAIQEPAIKLGEAMQRTNILRDIGE 190

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
               G++Y P  +L    L RE+  +G  + +     +  A+L      ++   M  I  
Sbjct: 191 DLRIGRIYLPQTVLAQFNLSREALAAGNQNQQFIEMWEHEAQLAETLYQESFVMMPQIDE 250

Query: 249 DVFPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           D   A +  ++    +L   + + +++ +      +  +   + ++
Sbjct: 251 DCREALLAAALIYREILTVIRKNNYQVFAEKTAVPKQRKIQLLFTA 296


>gi|159486326|ref|XP_001701192.1| phytoene synthase [Chlamydomonas reinhardtii]
 gi|47779183|gb|AAT38474.1| chloroplast phytoene synthase precursor [Chlamydomonas reinhardtii]
 gi|47779185|gb|AAT38475.1| chloroplast phytoene synthase precursor [Chlamydomonas reinhardtii]
 gi|158271892|gb|EDO97702.1| phytoene synthase [Chlamydomonas reinhardtii]
          Length = 382

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 17/295 (5%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +  +      +   +     YL   L  P    ++  +Y +      + D          
Sbjct: 83  VLDQAYEKCGQVTSEYAKTFYLGTQLMTPAQAKAVWAVYVWCRRTDELVDGPNASKITPK 142

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++  E+       +        L     ++ L  Q F DMIE    D        
Sbjct: 143 ALDRWEERLEALFD---GKPYDELDAALTDTAAKFPLHIQPFRDMIEGMRMDLVKSRYET 199

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y +R++  +  +   I+        +     R     G A  +  ++  +    
Sbjct: 200 FDELYEYCYRVAGTVALMCMPIMGIEPTYKGQLEPVYRAALALGTANQLTNILRDVGEDA 259

Query: 191 -HRGQLYFPLDILGAVGLDRESFLSGQN-------SDRISLAIKIFAELGLKYLFKAREE 242
             R ++Y PLD L   G+  +  L+G +        DR    +        +Y   A   
Sbjct: 260 YQRNRIYVPLDELDKYGISEKELLTGLHAPTTGAMDDRWRNFMHFQITRARQYFTDAEGG 319

Query: 243 MRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +  + P    P +  + +   +L   + + +   S      +  +   +  +  +
Sbjct: 320 VDLLAPQARWPVWSALILYRQILDAIEANDYDNFSKRAYVPKWRKMVSLPVAYTR 374


>gi|194037030|ref|XP_001925076.1| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial-like [Sus
           scrofa]
          Length = 333

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 3/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            + +  LR  DY+ YL  LL P   R S   L  F+ EL +V+D+        MR+Q+WK
Sbjct: 59  RYCMELLRKRDYEGYLCSLLFPAESRSSAFALRAFNVELAQVKDSVSEKTIGLMRMQFWK 118

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +       +    P ++EL   V++++L  ++ + +I+    +  + +  + ++ E+
Sbjct: 119 KTVDDIY--CDSPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELEN 176

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           YA    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI
Sbjct: 177 YAENTQSSLLYLTLEILGVKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDI 235

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
               G+ +E FL       +   +   A     +L  AR   + +    FPAF+     E
Sbjct: 236 CMLHGVSQEDFLRKSQDKNVRDVVYDIASQAHLHLKHARSFHKSVPAKAFPAFLQTVALE 295

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             LK  Q   F I   S      + P  +   S +KR+
Sbjct: 296 DYLKKIQQVDFDIFHPSLQQKNTLLPLSVYIQSWRKRY 333


>gi|77556699|gb|ABA99495.1| Phytoene synthase, chloroplast precursor, putative, expressed
           [Oryza sativa Japonica Group]
          Length = 344

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 90/269 (33%), Gaps = 9/269 (3%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YL   L  P  R ++  +Y +      + D   +       L  W+   E   +    
Sbjct: 74  TFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKRLEDLFE---G 130

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
                +   L   V ++ +  Q F DMIE    D +        +   Y + ++  +  +
Sbjct: 131 RPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYRSFDELYLYCYYVAGTVGLM 190

Query: 154 ATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
              ++           +        GIA  +  ++  +     RG++Y PLD L   GL 
Sbjct: 191 TVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAEAGLT 250

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHA 267
            E    G+ +D+    +K        +  +A + + ++      P    + +   +L   
Sbjct: 251 EEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSASRWPVLASLWLYRQILDAI 310

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           + + +   +     N+  +   +  +  +
Sbjct: 311 EANDYNNFTKRAYVNKAKKLLSLPVAYAR 339


>gi|89096857|ref|ZP_01169748.1| phytoene synthase [Bacillus sp. NRRL B-14911]
 gi|89088237|gb|EAR67347.1| phytoene synthase [Bacillus sp. NRRL B-14911]
          Length = 300

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 99/284 (34%), Gaps = 6/284 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D  +  R ++      Y A    P     ++  +Y F        D   +   +   L
Sbjct: 9   QADFDYCERIIKKHSKSFYYAFSQLPREKANAVYAIYAFCRTADECADGKHSFKKKVQLL 68

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +  K   +       AE   P    L  +   Y++    F D ++    D    +     
Sbjct: 69  RQLKKELDLFNDH--AELDKPLWRALRQVFNTYEMDISPFYDQLDGQSMDLSFTAPNTMN 126

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLY 196
           + E Y++ ++  +  +   ++ S+  +    ++   G+A  I  ++  +   YH + ++Y
Sbjct: 127 ELEKYSYYVAGSVGLMLLPVIASKPSADLHSIVVNLGVAMQITNILRDIGEDYHEKNRIY 186

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            P + L      +E    G  ++      +  A             +  +  D   P ++
Sbjct: 187 LPGEELSHFQYSQEDLHKGIINENFISLWEKLAARAESLYNNFLLNIELLDEDSRIPVYL 246

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              +   +L   +N+G++ ++  +   +        ++++K+ F
Sbjct: 247 SAHVYRGILDAVRNNGYQCLTKRNYVTKEKMAQI--NAAVKRVF 288


>gi|317968105|ref|ZP_07969495.1| phytoene synthase [Synechococcus sp. CB0205]
          Length = 310

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 100/288 (34%), Gaps = 11/288 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    +   +     YL  LL PP  R ++  +Y +      + D+          
Sbjct: 16  LEEAFEACRQETAEWAKTFYLGTLLMPPAKRRAIWAIYVWCRRTDELMDSPEAMARPVAE 75

Query: 77  LQWWKDIFESSTK-GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L    D +E  T+     E        ++  + +Y  P Q +LDMIE    D        
Sbjct: 76  LAERLDRWEERTRAFFKGEIQDGLDRVMVDTLERYPQPLQPYLDMIEGMRMDLTTTRYAT 135

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLICQL 186
               + Y +R++  +  +   ++  +    S                GIA  +  ++  +
Sbjct: 136 FDDLKLYCYRVAGTVGLMTQEVMGVDPAYTSAPWSDPPDTSDAAVALGIANQLTNILRDV 195

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG++Y P + L   G   E  ++G  +D     ++   +   ++  ++   +R++
Sbjct: 196 GEDRGRGRIYLPQEDLQRFGYSEEELMAGTLNDSWRELMRFQVDRAREWFARSEAGVRWL 255

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            PD   P +  + +   +L   +   + + +H     +  +   +  S
Sbjct: 256 APDARWPVWASLRLYRGILDVIEELDYDVFNHRAYVPRTGKFLDLPKS 303


>gi|296226957|ref|XP_002759165.1| PREDICTED: UPF0551 protein C8orf38, mitochondrial-like [Callithrix
           jacchus]
          Length = 333

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 3/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            + L  LR  DY+ YL  LL P   R S   L  F+ EL +V+D+        MR+Q+WK
Sbjct: 59  SYCLELLRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQVKDSISEKTIGLMRMQFWK 118

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              E            P ++EL   V++++L  ++ +++I+    +  + +  + K+ E+
Sbjct: 119 KTVEDIYCDNP--PHQPVAIELWKAVKRHNLTKRWLMNIIDEREKNLDDQAYRNIKELEN 176

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           YA      L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI
Sbjct: 177 YAENTQCSLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRATPYHVSRRKVFLPMDI 235

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
               G+ +E FL       +   I   A     +L  AR   + +    FPAF+     E
Sbjct: 236 CMLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKSVPVKAFPAFLQTVSLE 295

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             L   Q   F I   S      + P Y+   S +K +
Sbjct: 296 DFLMKIQRVDFDIFHPSLQQKNSLLPLYLYIQSWRKIY 333


>gi|261380975|ref|ZP_05985548.1| squalene synthase HpnD [Neisseria subflava NJ9703]
 gi|284796004|gb|EFC51351.1| squalene synthase HpnD [Neisseria subflava NJ9703]
          Length = 282

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 91/280 (32%), Gaps = 5/280 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              +  + + +                R +++ LY F  EL  V D+  +P    + L W
Sbjct: 3   ALDYCHQKVAESHSSFLSGFRFLSVEKRNAITVLYAFCRELDDVVDSCTDPNVAQITLNW 62

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+   E      +     P    L  I   +DLP   F  +I+    D          + 
Sbjct: 63  WRSDLEKVFNNEM--PEHPVHQALKDIRENFDLPKNEFEALIDGMQMDLEQARYGSFDEL 120

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y  R++  +  L   IL        L      G+A  +  +I  +     +G++Y P+
Sbjct: 121 KLYCHRVAGVVGRLIARILGFSNLKT-LEYADKMGLALQLTNIIRDVGEDARQGRIYLPI 179

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVS 258
           + +    +     +  + ++  +  ++       +   +A   +            I  +
Sbjct: 180 EEMQKFDVPANVIMQCKPTENFAQLMQFQVNRARETYREAMLLLPAEDKKSQKVGLIMAA 239

Query: 259 ITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
           I  ++L      G   ++++        +    L + +  
Sbjct: 240 IYYALLNEIDRDGAQNVLTYKIAIPSPRKKRIALKTWLFG 279


>gi|62648626|ref|XP_232684.3| PREDICTED: hypothetical protein [Rattus norvegicus]
 gi|109476122|ref|XP_001072347.1| PREDICTED: hypothetical protein [Rattus norvegicus]
          Length = 333

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 3/283 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                L+ L  LR  DY+ YL  LL P   + S S L  F+ EL +V+D+        MR
Sbjct: 54  IPDSHLYCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMR 113

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           +Q+W+   E            P ++EL   V++++L  ++ L +I+    +  + +    
Sbjct: 114 MQFWRKAVEDMFCDNP--PHQPVAMELWKAVKRHNLTKRWLLRIIDEREKNLDDKAYRSI 171

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++ E YA    S L++L   +L  +   A      + G AQ I   +   P H  R Q++
Sbjct: 172 RELETYAENTQSSLLYLTLEVLGVKDVHA-DHAASHIGKAQGIVTCLRATPYHSSRRQVF 230

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P+D+    G+ +E FL       +   +   A     +L  AR     +  + FPAF+ 
Sbjct: 231 LPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHSRVPAEAFPAFLQ 290

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               E  LK  Q   F I   S      + P  +   S +KR+
Sbjct: 291 TVSLEDYLKKIQRVDFDIFHPSLQQKNTLLPLSLYIQSWRKRY 333


>gi|238020884|ref|ZP_04601310.1| hypothetical protein GCWU000324_00779 [Kingella oralis ATCC 51147]
 gi|237867864|gb|EEP68870.1| hypothetical protein GCWU000324_00779 [Kingella oralis ATCC 51147]
          Length = 283

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 103/282 (36%), Gaps = 6/282 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLAC-LLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +   +     +   +  +LA     PP  R +++ LY +  EL  + D +R+P      L
Sbjct: 2   QPLDYCREKAQT-SHSNFLASFRFLPPAQRDAMTILYAYCRELDDIVDDSRDPSIARATL 60

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
            WW+       +   A    P +  L SI   + LP    +D+I     D ++D      
Sbjct: 61  AWWRQDLSKVFQANTA-PEHPVNQALRSIQPVFRLPESELMDIINGMEMDLHHDRYATFD 119

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             ++Y +R++  +  L   IL       +LR  +  G+A  +  +I  +      G++Y 
Sbjct: 120 DLQYYCYRVAGVVGRLIARILGYT-QDTTLRYAETLGLALQLTNIIRDVGEDARMGRIYL 178

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIP 256
           P D L   G+   S L+   +   +  ++           +A   +         A  I 
Sbjct: 179 PQDELAQFGVSETSILAATPTPEFATLMQFQFNRARDTYRQAIALLPPADKKTQKAGLIM 238

Query: 257 VSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKK 297
            SI  ++L   +  G   ++ +        +    L + +  
Sbjct: 239 ASIYHALLLEIERDGLANVLRYKIRIPNPRKMRIALKTWLFG 280


>gi|221185791|gb|ACM07426.1| CrtM [Halobacillus halophilus DSM 2266]
          Length = 278

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 90/276 (32%), Gaps = 5/276 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +         +         A  + P   + ++  +Y F      + D   NP      
Sbjct: 4   LNNAYDHCKNIIEKHSKTFSKAFAMLPKHQKRAVWAIYAFCRRADDIVDEGENP---KEE 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+ +   F+   +G +     P  + L     ++ L    F +MI     D Y  +I   
Sbjct: 61  LEAFAVEFDLFMEGRLETE-DPCWIALQDAFERFPLDPAPFYEMIVGQRMDLYPKTIDTK 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
               HY + ++S +  +   +L   + S         G A  I  ++  +       ++Y
Sbjct: 120 DDLLHYCYHVASTVGLMLLPVLAPGKVSRVKTGAIELGYAMQITNILRDIGEDLDNHRIY 179

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            P  ++   G  R    + + ++      +  A+    Y   A   +         P   
Sbjct: 180 IPKQMMIEYGYTRTDLHNKKVNEAFIQLWEDLAQDAEHYYRNALATLPEYPVYSRTPVGG 239

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
              +  ++++  +N+ +++    +  +  ++   + 
Sbjct: 240 AAKMYRAIIQTVRNNDYQVFGKRNYVSDQMKKQIIA 275


>gi|254431596|ref|ZP_05045299.1| phytoene/squalene synthetase [Cyanobium sp. PCC 7001]
 gi|197626049|gb|EDY38608.1| phytoene/squalene synthetase [Cyanobium sp. PCC 7001]
          Length = 316

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 104/285 (36%), Gaps = 11/285 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +      +         YL  LL PP  R ++  +Y +      + D+A        +
Sbjct: 22  LEQAYEDCRQETARWAKTFYLGTLLMPPAKRRAIWAIYVWCRRTDELMDSAEAQALPQKQ 81

Query: 77  LQWWKDIFESSTK-GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+   + +E  T+     E      + ++  + +Y  P Q +LDMIE    D        
Sbjct: 82  LEQRLEQWEQRTRGFFRGEVRDGLDLVMVDTLERYPQPLQPYLDMIEGQRMDLRQHRYAT 141

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLICQL 186
            K+   Y +R++  +  +   ++  +    S                GIA  +  ++  +
Sbjct: 142 FKELALYCYRVAGTVGLMTQEVMGRDPAYTSAPWSDAPDTSEAAVALGIANQLTNILRDV 201

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG++Y P D L   G   +  L+G  +D     ++   E   ++  ++   +R++
Sbjct: 202 GEDRSRGRIYLPQDDLMRFGYGEDQLLAGVVNDNWRALMRFQVERARQWFARSEAGVRWL 261

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
            PD   P +  + +   +L   + H + + +      +  +   +
Sbjct: 262 APDARWPVWASLRLYRGILDVIEQHDYDVFNKRAFVPRTGKLLDL 306


>gi|77998119|gb|ABB16441.1| chloroplast phytoene synthase [Daucus carota]
          Length = 256

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 84/259 (32%), Gaps = 9/259 (3%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
                 +     YL  LL  P  R ++  +Y +      + D           L  W+  
Sbjct: 1   CGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALDRWEKR 60

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
                     +    +   L   V  Y +  Q F DMI+    D          +   Y 
Sbjct: 61  LNDLFD---GQPYDMYDAALADTVSTYPVDIQPFKDMIDGMRMDLKKSRYQTFDELYLYC 117

Query: 144 FRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
           + ++  +  ++  ++           +        GIA  +  ++  +     RG++Y P
Sbjct: 118 YYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRGRIYLP 177

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPV 257
            + L   G+  E    G+ +D+    +K   +    +  +A + +  +      P +  +
Sbjct: 178 QEELKLAGITPEYIFKGKVTDKWRSFMKGQIKRARMFFDEAEKGVAELSSASRWPVWASL 237

Query: 258 SITESVLKHAQNHGFKIVS 276
            + + +L   + + +   +
Sbjct: 238 LLYKQILDAIEANDYDNFT 256


>gi|325266375|ref|ZP_08133053.1| phytoene synthase [Kingella denitrificans ATCC 33394]
 gi|324982168|gb|EGC17802.1| phytoene synthase [Kingella denitrificans ATCC 33394]
          Length = 283

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 94/281 (33%), Gaps = 4/281 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           +   +  +  R              P  + +++ LY F  EL  V D   +  T    LQ
Sbjct: 2   QPMEYCRQKARQSGSSFLAGFRFLSPQQKDAMTALYAFCRELDDVVDDCSDRQTARTTLQ 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW+                P    L ++   + LP +   ++I     D ++        
Sbjct: 62  WWRADLRRVFA-AAEMPEHPVCQALKTVCPAFSLPEEELAEIINGMEMDLHHVRYAAFDD 120

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
             +Y +R++  +  L   IL  +     L+  +  G+A  +  +I  +      G++Y P
Sbjct: 121 LRYYCYRVAGVVGRLIARILGFDSAQT-LQYAETLGLALQLTNIIRDVGEDARMGRIYLP 179

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPV 257
            + L   G+  +  LS   +      ++   E  L    +A   +            +  
Sbjct: 180 QEDLQRFGVSEQDILSANATLEFVRLMQFQYERALNAYREAVALLPPCDKKRQKAGLVMG 239

Query: 258 SITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKK 297
           SI  ++L+  +  G   ++ +        +    L + +  
Sbjct: 240 SIYYALLREIERDGLGNVLRYKIRIPNPRKMRIALKTWLFG 280


>gi|113953614|ref|YP_731795.1| phytoene synthase [Synechococcus sp. CC9311]
 gi|113880965|gb|ABI45923.1| phytoene synthase [Synechococcus sp. CC9311]
          Length = 302

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 102/290 (35%), Gaps = 17/290 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP----IT 72
                    R   +     YL  LL P   R ++  +Y +      + D+          
Sbjct: 8   LDAAFEACRRETAEWAKTFYLGTLLLPLEKRRAIWAIYVWCRRTDELMDSEEAQSRSVDE 67

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL  W++       G +A+ +    ++    ++++    Q +LDMIE    D     
Sbjct: 68  LAERLDRWEEKTRELFSGHVADELDAVMLD---TLQRFPQDIQPYLDMIEGQRMDLSWTR 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLI 183
               +  + Y +R++  +  +   ++  +    S                GIA  +  ++
Sbjct: 125 YPTFEDLKLYCYRVAGTVGLMTQGVMGVDEAYTSAPWSDCPDPSDAAVALGIANQLTNIL 184

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P + L   G+  E  L+G+ +D     +        ++  ++   +
Sbjct: 185 RDVGEDRARGRIYLPQEDLHHFGVSEEDLLAGRINDAWIELMTFQLARAREWFVRSEAGV 244

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           R++  D   P +  + +   +L   + + + + +      +L +   +  
Sbjct: 245 RWLSADARWPVWTSLRLYSRILDEIERNKYDVFNQRAFVGKLSKALELPR 294


>gi|255065896|ref|ZP_05317751.1| squalene synthase HpnD [Neisseria sicca ATCC 29256]
 gi|255049807|gb|EET45271.1| squalene synthase HpnD [Neisseria sicca ATCC 29256]
          Length = 282

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 90/281 (32%), Gaps = 5/281 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           +   +  +   +            P   R +++ LY F  EL  V D   +P      L 
Sbjct: 2   QGLNYCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDVVDDCSDPNVAQATLN 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW+   +            P +  L  +   + LP      +I+    D         ++
Sbjct: 62  WWRGDLDKVF--GGVMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEE 119

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            + Y  R++  +  L   IL       +L      G+A  +  +I  +      G++Y P
Sbjct: 120 LKLYCHRVAGVVGCLIARILGFSD-DRTLEYADKMGLALQLTNIIRDVGEDARNGRIYLP 178

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPV 257
           ++ +    +     +  + +D  +  ++       +   +A   +            + V
Sbjct: 179 MEEMQRFDVPASVIMQCKPTDNFTELMRFQVSRARETYREAMSLLPAADKKSQKVGLVMV 238

Query: 258 SITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
           +I  ++L      G   ++++        +    L + +  
Sbjct: 239 AIYYALLNEIDRDGAQNVLTYKIAIPSPRKKRIALKTWLFG 279


>gi|117923622|ref|YP_864239.1| squalene/phytoene synthase [Magnetococcus sp. MC-1]
 gi|117607378|gb|ABK42833.1| Squalene/phytoene synthase [Magnetococcus sp. MC-1]
          Length = 288

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 104/277 (37%), Gaps = 5/277 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           +    ++      Y    L P   R  L  LY F  E+  + D   +P    M+L WW +
Sbjct: 6   YCQARVKRSGSSFYWPMRLLPAHKRRGLFALYAFCREVDDIVDRQLDPRAAHMKLAWWHE 65

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                      +   P +  L ++  QY      F+++++    D    +  + ++ E Y
Sbjct: 66  EIVEVF---TGQPRHPVARALHALKDQYGWQMAPFIEILQGMEMDLQPRNYENWQELEGY 122

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             ++S  +   A  +       A  +   + G+A  +  ++  L      G++Y P  +L
Sbjct: 123 CHKVSVAVGLAALPVFGVTGERA-QQFAHHLGMALQLTNILRDLFEDGQMGRVYLPQTVL 181

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITE 261
            A G+  +  L G+    +  A++        +  +ARE ++      +  A    ++  
Sbjct: 182 QAHGVQHQGILDGEWQPALVAALQEVDARIESHFAQARELVQGEHFAQLTAARSMGAVYH 241

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           + L+  +  G+++       ++  + W  L   +  R
Sbjct: 242 ARLRRIRAAGYRVDQQPAQLSKSYKLWLCLRCWLASR 278


>gi|307182779|gb|EFN69902.1| UPF0551 protein C8orf38-like protein [Camponotus floridanus]
          Length = 304

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 6/293 (2%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           L+ +    RKE +  S    + L+ +R  DY+ +L  LL P   + +   +  F+ E+ +
Sbjct: 16  LRRINTTVRKERQTPSE---YCLQLVRRNDYENFLCTLLLPHNIKSAAFAIRAFNVEVAQ 72

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           V D   +     MRLQ+W D   +          SP S+EL  I++Q+ L  +YF  +I+
Sbjct: 73  VEDQVSDNKIGAMRLQFWTDALNNIYNDQP--PRSPVSLELHRILQQHKLSKRYFKRLID 130

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQL 182
           A      N    D +  E Y   I+S +  L      +   +A      + G A  +   
Sbjct: 131 ARLNKLSNSIFMDLESLEQYCDYIASSIYFLLLEANGTTNVNA-DHAASHFGKAHGLVTS 189

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           I  +P +  R  +  P D+L    +  ES   GQ+S  +  A+   A    ++L  A   
Sbjct: 190 IRSVPYNARRRIMILPQDVLLKNSVSSESVFQGQSSAGLKDAVFEVASCAKQHLKVATSL 249

Query: 243 MRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            + +  D    F+P    ES L+  +   F +   +    +   P  +    +
Sbjct: 250 KKAMGKDFNAIFLPAVCVESYLEELRKVDFDVFHPTLQRRKGFLPLKLFWRKM 302


>gi|124024352|ref|YP_001018659.1| squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9303]
 gi|123964638|gb|ABM79394.1| Squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9303]
          Length = 313

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 103/294 (35%), Gaps = 17/294 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR--- 73
                    +         YL  +L P + R ++  +Y +      + D+A         
Sbjct: 19  LDEAYEACRKETAQWAKTFYLGTMLLPSIKRRAIWAIYVWCRRTDELMDSAEAQTRPVSE 78

Query: 74  -DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL  W++   +   G + + +     +    + ++    Q +LDMIE    D     
Sbjct: 79  LANRLDQWEERTRAMFAGQVLDGLDAVMAD---TLERFPQSIQPYLDMIEGQRMDLNQHR 135

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLI 183
               +Q E Y +R++  +  +   ++  +    +                GIA  +  ++
Sbjct: 136 YATFQQLELYCYRVAGTVGLMTQHVMGLDPAYTTAPWSSSPETSDAAIALGIANQLTNIL 195

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P + L   G      ++G+ +      +    E   ++  ++   +
Sbjct: 196 RDVGEDRGRGRIYIPQEDLDRFGYSEADLMAGRLNSAWKDLMAFQLERAREWFARSEAGV 255

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           R++  D   P +  + +   +L   +   + + ++    ++ ++   +  S + 
Sbjct: 256 RWLSQDARWPVWASLRLYRGILDSIERLDYDVFNNRAYVSRWMKLVDLPLSYLM 309


>gi|302036863|ref|YP_003797185.1| phytoene synthase [Candidatus Nitrospira defluvii]
 gi|190343278|gb|ACE75666.1| phytoene synthase [Candidatus Nitrospira defluvii]
 gi|300604927|emb|CBK41260.1| Phytoene synthase [Candidatus Nitrospira defluvii]
          Length = 303

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 99/297 (33%), Gaps = 10/297 (3%)

Query: 8   KNTRKEEKIF--SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           + T  ++ +   +    +     +    + Y + L  P   R ++  +Y F  E+    D
Sbjct: 5   RRTHTDDTMMTPAEAQTYCTTLTKKSGSNFYYSFLFLPKARREAMYTVYAFCKEVDNAVD 64

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                      L  W+    ++          P +V L   VR+  +P  YF ++I+   
Sbjct: 65  EPPPGSHPQEELTRWRRELAAAYD---GTPTFPVTVSLARHVRELSIPQAYFEELIKGVE 121

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
            D          Q   Y +R++S +  +   +  +    A    +   G+A  +  ++  
Sbjct: 122 MDLTTTRYATFDQLSLYCYRVASVVGLICLHVFGTTSPRAQDYAVN-LGMAFQLTNILRD 180

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           L      G++Y P + L       E  L  +     +  ++       ++  KA   +  
Sbjct: 181 LGNDAECGRVYVPQEDLARFAYREEDLLHRRYKPEFTEFMRFEVGRAKEFYAKAARALDS 240

Query: 246 ILPDVFPAF----IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +      A     I   +   +L+  +  G++++    T     R        ++ R
Sbjct: 241 LPRAERRALTVAEIMRGVYSRILQRIEQSGYRVLGDRVTLTPSHRLAVAAGVWLRSR 297


>gi|73999611|ref|XP_535131.2| PREDICTED: similar to CG15738-PA [Canis familiaris]
          Length = 334

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 3/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            + +  LR  DY+ YL  LL P   R S   L  F+ EL +V+D+        MR+ +WK
Sbjct: 60  RYCVELLRKRDYEGYLCSLLFPAESRSSAFALRAFNVELAQVKDSVSEKTIGLMRMAFWK 119

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +            P ++EL   V++++L  ++ + +I+    +  + +  + ++ E+
Sbjct: 120 KTVDDIYCDNP--PQQPVALELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELEN 177

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           YA    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI
Sbjct: 178 YAENTQSSLLYLTLEILGVKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDI 236

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
               G+ +E FL       +   I   A     +L  AR   + +    FPAF+     E
Sbjct: 237 CMLHGVSQEDFLRKNQDKNVRDVIYDIASQAHLHLKHARSFHKSVPVKAFPAFLQTVALE 296

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + LK  Q   F I   S      + P  +   S +KR+
Sbjct: 297 NYLKRIQQVDFDIFHPSLQQKDTLLPLSLYIQSWRKRY 334


>gi|321476738|gb|EFX87698.1| hypothetical protein DAPPUDRAFT_306430 [Daphnia pulex]
          Length = 312

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 123/294 (41%), Gaps = 3/294 (1%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F+ +    + +      L+    +R  DY+ +LA LL P   R S   +  F+  L +V+
Sbjct: 21  FVARKLSSKVQTSKNSFLYCQELVRKHDYENFLAALLLPQASRQSTIAVRAFNVSLAQVQ 80

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D         MR+++W +  E+  +          +++L   V++++L  ++   +I + 
Sbjct: 81  DQVSQGTIGQMRMKFWSETLEAVYQNTP--PAQLVALQLYEAVQRHNLSKRWLQRLISSR 138

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
                + +     + E YA    S +++L    L+  +  +      + G AQ +  L+ 
Sbjct: 139 ENHLSSKAFQSLSKVEDYAEHSVSSVLYLTLESLNIRKVDS-DHAASHIGRAQGLVTLLR 197

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +P +  R Q+Y PLD+L    + +  FL G +  ++   I   A     ++ KAR  + 
Sbjct: 198 AIPYNSKRQQVYVPLDLLVQHKVSQNDFLRGSDDKKVKDLIFDVASTANAHIQKARTIIP 257

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +  +   A +P+   +S L   +   F +     +    + PW +  +  + +
Sbjct: 258 KVPSEAKIALMPLISVDSYLDQLRAADFNVFDPKLSQRNNLLPWKLWWNKFRGK 311


>gi|260435367|ref|ZP_05789337.1| phytoene synthase [Synechococcus sp. WH 8109]
 gi|260413241|gb|EEX06537.1| phytoene synthase [Synechococcus sp. WH 8109]
          Length = 302

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 106/293 (36%), Gaps = 17/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP----IT 72
                    R   +     YL  LL PP  R ++  +Y +      + D++         
Sbjct: 8   LDAAFEACRRETAEWAKTFYLGTLLLPPEKRRAIWAIYVWCRRTDELMDSSEAQGRPVEE 67

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL  W++   +   G +A+ +    V+    + ++    Q +LDMIE    D     
Sbjct: 68  LAERLDRWEEKTRALFDGRVADDLDAVMVD---TLERFPQGIQPYLDMIEGQRMDLTWTR 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLI 183
               +  + Y +R++  +  +   ++  ++   S                GIA  +  ++
Sbjct: 125 YPRFEDLKLYCYRVAGTVGLMTQGVMGVDQAYTSAPWSDCPDTSDAAVALGIANQLTNIL 184

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P + L   G   E  ++G  ++     ++   E    +  ++   +
Sbjct: 185 RDVGEDRGRGRIYLPQEDLERFGYSEEELMAGTLNNAWRALMRFQLERARDWFARSEAGV 244

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           R++  D   P +  + +   +L   +   + + +H     ++ +   +  S +
Sbjct: 245 RWLSADARWPVWTSLRLYRGILDEIERVDYDVFNHRAYVAKVNKLLDLPRSFL 297


>gi|87301825|ref|ZP_01084659.1| phytoene synthase [Synechococcus sp. WH 5701]
 gi|87283393|gb|EAQ75348.1| phytoene synthase [Synechococcus sp. WH 5701]
          Length = 312

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 107/303 (35%), Gaps = 17/303 (5%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           VL   T  T               +         YL  LL PP  R ++  +Y +     
Sbjct: 3   VLAASTTVTCPSLPTLEEAYQSCRQETAQWAKTFYLGTLLMPPAKRRAIWAIYVWCRRTD 62

Query: 62  RVRDTARNPITR----DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYF 117
            + D+ +           RL  W++   S   G + +++    V+    +++Y  P Q +
Sbjct: 63  ELMDSPQAQALPVECLAERLDRWEERTRSLFAGEVHDALDLVMVD---TLQRYPQPLQPY 119

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------ 171
           LDMIE    D         +  E Y +R++  +  +   ++  +    S    +      
Sbjct: 120 LDMIEGQRMDLQRHRYARFEDLELYCYRVAGTVGLMTQEVMGLDPAYTSAPWSERPDTSS 179

Query: 172 ---YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                GIA  +  ++  +     RG++Y P + L   G      L+G  +D     +   
Sbjct: 180 AAVALGIANQLTNILRDVGEDRARGRIYLPQEDLERFGYSEADLLAGTLNDNWRALMDFQ 239

Query: 229 AELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
                ++  ++   +R++  D   P +  + +   +L   +   + + SH     + ++ 
Sbjct: 240 LRRARQWFARSEAGVRWLSADARWPVWASLRLYRGILAVIEQLDYDVFSHRAYVPRPLKL 299

Query: 288 WYM 290
             +
Sbjct: 300 LDL 302


>gi|300784230|ref|YP_003764521.1| phytoene synthase [Amycolatopsis mediterranei U32]
 gi|299793744|gb|ADJ44119.1| phytoene synthase [Amycolatopsis mediterranei U32]
          Length = 308

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 82/281 (29%), Gaps = 4/281 (1%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E           R         +LA  L P   R +   LY F      + D       
Sbjct: 10  TEPALRAAYTECRRINAHYGRTFFLATRLLPSRARPAAHALYGFARMADELVDNPAPGTD 69

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L    +  +            P  + L   VR+Y L  + F   +++   D     
Sbjct: 70  PAASLDRVGERVDVVFA--GGTPDDPVLLALSDTVRRYGLSRELFDAFLKSMRMDLSPVE 127

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-YAGIAQFIGQLICQLPIHYH 191
                +   Y +  ++ +      +  +    A         G A  +   +  +     
Sbjct: 128 YRTFAELGEYMYGSAAVIGLQMLPVFGTVGAVADAVPGAIALGEAFQLTNFLRDVGEDLD 187

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG+LY P   L A G+ R      +   RI  A+  F         +A   +  + P+  
Sbjct: 188 RGRLYLPSSELAAFGVSRSLLEERRPDPRIRAAMAYFVARTRAVYRRAEAGVALLRPESR 247

Query: 252 PAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
           P     +++ E +L       + I++      +  R    L
Sbjct: 248 PCARTALTLYEGILDEIVAADYDILTRRAVVPKRRRLVVAL 288


>gi|224073174|ref|XP_002304008.1| predicted protein [Populus trichocarpa]
 gi|222841440|gb|EEE78987.1| predicted protein [Populus trichocarpa]
          Length = 298

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 92/288 (31%), Gaps = 9/288 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            +             +     YLA LL     + ++  +Y + T +  + D         
Sbjct: 4   TLLEEAYKRSRNICAEYARTYYLASLLMTEERQKAIWAIYAWGTRIDEMVDGPNAVYMGT 63

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W++  +                 L   V  + L  + F +MIE    D++     
Sbjct: 64  SLLDRWEERLQDIFD---GRPYDILDAALTDTVSNFCLDIKPFKEMIEGMRMDTWKSRYK 120

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIH 189
           + ++   Y + ++     +   ++           +      + GIA  +  ++  +   
Sbjct: 121 NFQELYLYCYYVAGTAGIMTVPVMGIAPESSVSTKSIYNAAIHFGIANQLTNILRDVGED 180

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  +   + + +D     +K        Y   A E    +   
Sbjct: 181 ALRGRVYLPQDELAQFGLCDKDVFARKVTDEWRELMKEQITRARFYFNLAEEGASQLEKA 240

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P +  + I   +L   +++ +   +      +  + + +  +  K
Sbjct: 241 SRWPVWSSLLIYRKILDAIEDNDYDNFTKRAFVGRTKKLFTLPLAYSK 288


>gi|108803686|ref|YP_643623.1| phytoene synthase [Rubrobacter xylanophilus DSM 9941]
 gi|108764929|gb|ABG03811.1| phytoene synthase [Rubrobacter xylanophilus DSM 9941]
          Length = 313

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 81/281 (28%), Gaps = 2/281 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                       R      Y +  L  P  R  +  LY F      + D           
Sbjct: 17  LEECYGLCRSIQRAHSRTYYFSTRLLEPEVRRGVHALYAFMRYADEIVDNPGRLPPEGQL 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
               +   E+        + +P         R+  +  +     + +   D+        
Sbjct: 77  AALERLEEEALAACRGGRTENPVLRAFADTARRCGIEERNVRAFMRSMKMDTSVTRYPTY 136

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++ E Y +  ++ +  +   +L  E   A     +  G A  +   +  +   + RG++Y
Sbjct: 137 RELEEYTYGSAAVVGIMMCRVLGVEDERA-YPHAEALGTAMQLTNFLRDIAEDWRRGRVY 195

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PL+ L   G   E    G    R +  ++            A E M YI      A + 
Sbjct: 196 LPLEDLERFGYREEELGEGVVDGRFAGLMRCEILRARGLYATADEGMGYIPRGRRYAVLV 255

Query: 257 V-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              +  ++L   +  G+ + S         +       + +
Sbjct: 256 ARRLYAAILDRIEEAGYDVFSRRAETTWPQKLALAAGCAFR 296


>gi|294670707|ref|ZP_06735582.1| hypothetical protein NEIELOOT_02429 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307595|gb|EFE48838.1| hypothetical protein NEIELOOT_02429 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 272

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 91/270 (33%), Gaps = 5/270 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           +   +    +              P   + +L  LY F  EL  V D   +     M LQ
Sbjct: 2   QPLDYCRNKVSKSGSSFVSGFRFLPQNRQNALIALYAFCRELDDVVDDCADKQVAAMGLQ 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW+                P +  L  IV ++ LP     ++IE    D       D  +
Sbjct: 62  WWRGDLAKVFSD--GLPEHPVNQTLKHIVIEFSLPQAELEEIIEGMQMDLRQVRYADFAE 119

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y +R++  +  L   IL  +    +L   +  G+A  +  +I  +      G++Y P
Sbjct: 120 LSVYCYRVAGVVGRLIARILGFDN-EQTLLYAEKQGLALQLTNIIRDVGEDARMGRIYLP 178

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPV 257
            D L   G+  ++ L  ++S      +            +AR+ +            I  
Sbjct: 179 QDELERFGIAEQAVLRAESSAEFIEFMNFQYTRAQNLYREARDLLPDEDCRRQKAGLIMA 238

Query: 258 SITESVLKHAQNHG-FKIVSHSHTPNQLVR 286
           +I  ++L+  +  G   ++ +        +
Sbjct: 239 AIYYALLQEIRRDGLGNVLRYKIAIPGPRK 268


>gi|288575744|ref|ZP_05977515.2| squalene synthase HpnD [Neisseria mucosa ATCC 25996]
 gi|288567224|gb|EFC88784.1| squalene synthase HpnD [Neisseria mucosa ATCC 25996]
          Length = 282

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 88/281 (31%), Gaps = 5/281 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           +   +  +   +            P   R +++ LY F  EL  V D   +P      L 
Sbjct: 2   QGLDYCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDVVDDCSDPNVAQATLN 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW+                P +  L  +   + LP      +I+    D         ++
Sbjct: 62  WWRGDLNKVF--GGVMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEE 119

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            + Y  R++  +  L   IL       +L      G+A  +  +I  +      G++Y P
Sbjct: 120 LKLYCHRVAGVVGCLIARILGFSD-DRTLEYADKMGLALQLTNIIRDVGEDARNGRIYLP 178

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPV 257
           ++ +    +     +  + +D  +  ++       +   +A   +            +  
Sbjct: 179 MEEMQQFDIPASVIMRCKPTDNFAELMRFQVSRARETYREAMSLLPAADKKSQKVGLVMA 238

Query: 258 SITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
           +I  ++L      G   ++++        +    L + +  
Sbjct: 239 AIYYALLNEIDRDGAQNVLTYKIAIPSPRKKRIALKTWLFG 279


>gi|33864268|ref|NP_895828.1| squalene and phytoene synthase [Prochlorococcus marinus str. MIT
           9313]
 gi|33641048|emb|CAE22177.1| Squalene and phytoene synthases [Prochlorococcus marinus str. MIT
           9313]
          Length = 313

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 103/294 (35%), Gaps = 17/294 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR--- 73
                    +         YL  +L P + R ++  +Y +      + D+A         
Sbjct: 19  LDEAYEACRKETAQWAKTFYLGTMLLPSIKRRAIWAIYVWCRRTDELMDSAEAQTRPVSE 78

Query: 74  -DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL  W++   +   G + + +     +    + ++    Q +LDMIE    D     
Sbjct: 79  LANRLDQWEERTRAMFAGQVLDGLDAVMAD---TLERFPQSIQPYLDMIEGQRMDLNQHR 135

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLI 183
               +Q E Y +R++  +  +   ++  +    +                GIA  +  ++
Sbjct: 136 YATFQQLELYCYRVAGTVGLMTQHVMGLDPAYTTAPWSSSPETSDAAIALGIANQLTNIL 195

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P + L   G      ++G+ +      +    E   ++  ++   +
Sbjct: 196 RDVGEDRGRGRIYIPQEDLDRFGYSEADLMAGRLNSAWKDLMAFQLERAREWFARSEAGV 255

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           R++  D   P +  + +   +L   +   + + ++    ++ ++   +  S + 
Sbjct: 256 RWLSQDARWPVWASLRLYRGILDSIERLDYDVFNNRAYVSRWMKLVDLPLSYLM 309


>gi|78213902|ref|YP_382681.1| phytoene synthase [Synechococcus sp. CC9605]
 gi|78198361|gb|ABB36126.1| phytoene synthases [Synechococcus sp. CC9605]
          Length = 302

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 103/293 (35%), Gaps = 17/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR--- 73
                    R   +     Y+  LL PP  R ++  +Y +      + D+          
Sbjct: 8   LDAAFEACRRETAEWAKTFYIGTLLLPPEKRRAIWAIYVWCRRTDELMDSPEAQARPVEE 67

Query: 74  -DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL  W++   +   G + + +    V+    + ++    Q +LDMIE    D     
Sbjct: 68  LAERLDRWEEKTRALFDGRVEDDLDAVMVD---TLERFPQGIQPYLDMIEGQRMDLTWTR 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLI 183
               +  + Y +R++  +  +   ++  ++   S                GIA  +  ++
Sbjct: 125 YPRFEDLKLYCYRVAGTVGLMTQGVMGVDQAYTSAPWSDCPDTSDAAVSLGIANQLTNIL 184

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P + L   G   E  ++G  +      ++   E    +  ++   +
Sbjct: 185 RDVGEDRGRGRIYLPQEDLERFGYSEEELMAGTLNTAWRALMRFQLERARDWFARSEAGV 244

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           R++  D   P +  + +   +L   +   + + +H     ++ +   +  S +
Sbjct: 245 RWLSADARWPVWTSLRLYRGILDEIERVDYDVFNHRAYVAKVNKLLDLPRSFL 297


>gi|225077443|ref|ZP_03720642.1| hypothetical protein NEIFLAOT_02505 [Neisseria flavescens
           NRL30031/H210]
 gi|224951261|gb|EEG32470.1| hypothetical protein NEIFLAOT_02505 [Neisseria flavescens
           NRL30031/H210]
          Length = 282

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 87/280 (31%), Gaps = 5/280 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              +  +   +                R +++ LY F  EL  V D   +P    + L W
Sbjct: 3   ALDYCHQKAAESHSSFLSGFRFLSVEKRNAITVLYAFCRELDDVVDGCTDPNVAQITLNW 62

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+   E      +     P    L  I   +DLP   F  +I+    D          + 
Sbjct: 63  WRSDLEKVFNNEM--PEHPVHQALKDIRANFDLPKNEFEALIDGMQMDLEQARYGSFDEL 120

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y  R++  +  L   IL        L      G+A  +  +I  +     +G++Y P+
Sbjct: 121 KLYCHRVAGVVGCLIARILGFTNPKT-LEYADKMGLALQLTNIIRDVGEDARQGRIYLPI 179

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVS 258
           + +    +     +  + +D     ++       +   +A   +            I  +
Sbjct: 180 EEMQKFDVPANVIMQCKPTDNFVKLMQFQVNRARETYREAMSLLPAEDKKSQKVGLIMAA 239

Query: 259 ITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
           I  ++L      G   ++ +        +    L + +  
Sbjct: 240 IYYALLNEIDRDGAQNVLIYKIAIPSPRKKRIALKTWLFG 279


>gi|115489676|ref|NP_001067325.1| Os12g0626400 [Oryza sativa Japonica Group]
 gi|113649832|dbj|BAF30344.1| Os12g0626400 [Oryza sativa Japonica Group]
          Length = 362

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 88/264 (33%), Gaps = 9/264 (3%)

Query: 39  CLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISP 98
             L  P  R ++  +Y +      + D   +       L  W+   E   +         
Sbjct: 97  TQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKRLEDLFE---GRPYDM 153

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
           +   L   V ++ +  Q F DMIE    D +        +   Y + ++  +  +   ++
Sbjct: 154 YDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYRSFDELYLYCYYVAGTVGLMTVPVM 213

Query: 159 DSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
                      +        GIA  +  ++  +     RG++Y PLD L   GL  E   
Sbjct: 214 GIAPDSKASTESVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAEAGLTEEDIF 273

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGF 272
            G+ +D+    +K        +  +A + + ++      P    + +   +L   + + +
Sbjct: 274 RGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSASRWPVLASLWLYRQILDAIEANDY 333

Query: 273 KIVSHSHTPNQLVRPWYMLSSSIK 296
              +     N+  +   +  +  +
Sbjct: 334 NNFTKRAYVNKAKKLLSLPVAYAR 357


>gi|23099915|ref|NP_693381.1| phytoene synthase [Oceanobacillus iheyensis HTE831]
 gi|22778146|dbj|BAC14416.1| phytoene synthase [Oceanobacillus iheyensis HTE831]
          Length = 284

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 90/279 (32%), Gaps = 5/279 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
                +D  F  + ++      Y A    P     ++  +Y F        D   N   +
Sbjct: 2   HNQLIKDYNFCEKVIKKHSKSFYFAFNKLPKEKARAVFAIYTFCRYADDSVDNFNNSEEK 61

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
             ++   +   +  +KG I +S  P    L  +  +YD+    F + +E    D      
Sbjct: 62  QSKIDKIRKELDYFSKGEIVDS--PLWRALADVFERYDMDLYPFWEQLEGQQMDINFQQP 119

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
              ++ E+Y   ++  +  +   I+ S+      +     GIA  +  ++  +   +   
Sbjct: 120 HTLQELENYCSYVAGSVGRMLIPIIASQSIRDLKKEANDLGIAMQLTNILRDVGEDFKEN 179

Query: 194 Q-LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF- 251
             +Y PL  +  V         G+ +    +  +  A            ++ Y   D   
Sbjct: 180 NRIYLPLQEMSLVCYTHVDISDGKRNKEFIMLWEKLANRAETLYENFLNQLDYFDKDSQV 239

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPN-QLVRPWY 289
           P  +   +   +L   + + +    + +      ++ W 
Sbjct: 240 PIRLSAQVYRGILDAIRGNDYNCFEYRNYVPLPTMKQWL 278


>gi|157691794|ref|YP_001486256.1| phytoene synthase [Bacillus pumilus SAFR-032]
 gi|157680552|gb|ABV61696.1| phytoene synthase [Bacillus pumilus SAFR-032]
          Length = 279

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 91/276 (32%), Gaps = 6/276 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                      ++      Y A  + P   R ++  +Y F  +   + D + +P      
Sbjct: 4   VQTALKLCEETIQTHSKTFYRAFSMLPKKKRQAVWAVYSFCRKADDIVDESPSP---KEE 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  +++ F+   +G + +   P  V L    +++ +    F D+++    D         
Sbjct: 61  LASFRETFDRFLQGEV-DRNDPMWVALEHTFQEFRMDEAPFRDLLQGQEMDLEQHRYETL 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQL 195
            +   Y++ ++S +  +   I+   +           GIA  +  ++  +      R ++
Sbjct: 120 DELLIYSYHVASTVGLMLLPIIAPRKKEQLKEAAISLGIAMQLTNILRDIGEDKAERDRI 179

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAF 254
           Y P  ++   G   +    G  +       +  A     Y  +  + +         P  
Sbjct: 180 YLPKQVMDQFGYTEQELQEGIVNQAFQHVWEYIAFEAEAYYEEFFDHLHEFPLYSRIPVK 239

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                 +++L   + + +++ +     +   +   +
Sbjct: 240 AAAHFYKAILDKTRENEYRVFTERSFISNQEKALIL 275


>gi|313482927|gb|ADR51672.1| chloroplast phytoene synthase [Catharanthus roseus]
          Length = 379

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 82/256 (32%), Gaps = 9/256 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  +L  P  R ++  +Y +      + D         
Sbjct: 127 TVLSDAYDRCGEVCAEYAKTFYLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASHITP 186

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 187 SALDRWEARLEDLFR---GRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYK 243

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++                    GIA  +  ++  +   
Sbjct: 244 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKAPTETVYNAALALGIANQLTNILRDVGED 303

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P   L   GL  E   +G+ +D+    +K   +   K+  +A   +  +   
Sbjct: 304 ARRGRVYLPQGELAQAGLSDEDIFAGRVTDKWRNFMKKQIKRARKFFDEAESGVTQLSSA 363

Query: 250 VF-PAFIPVSITESVL 264
              P +  + +   +L
Sbjct: 364 SRWPVWASLLLYRQIL 379


>gi|33866786|ref|NP_898345.1| phytoene synthase [Synechococcus sp. WH 8102]
 gi|33639387|emb|CAE08771.1| phytoene synthases [Synechococcus sp. WH 8102]
          Length = 303

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 99/288 (34%), Gaps = 11/288 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    R   +     YL  LL PP  R ++  +Y +      + D+          
Sbjct: 9   LDAAFEACRRETAEWAKTFYLGTLLLPPAKRRAIWAIYVWCRRTDELMDSPEAQSRPVAE 68

Query: 77  LQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L    D +E  T+        +     ++  + ++    Q +LDMIE    D        
Sbjct: 69  LAERLDRWEEKTRALFNGTVENDLDAVMVDTLERFPQDIQPYLDMIEGQRMDLTWTRYPR 128

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLICQL 186
               + Y +R++  +  +   ++  +    S                GIA  +  ++  +
Sbjct: 129 FDDLKLYCYRVAGTVGLMTQGVMGVDGAYTSAPWSDRPDTSDAAVALGIANQLTNILRDV 188

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG++Y PL+ L   G   +  ++G+ +      ++   +    +  ++   +R++
Sbjct: 189 GEDRGRGRIYLPLEDLERFGYSEDDLMAGRLNSAWCELMQFQLKRARDWFARSEAGVRWL 248

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             D   P +  + +   +L   +   + + ++     ++ +   +  S
Sbjct: 249 SRDARWPVWTSLRLYRGILDAIERVDYDVFNNRAYVGKVSKLLDLPRS 296


>gi|328543825|ref|YP_004303934.1| Phytoene synthase protein [Polymorphum gilvum SL003B-26A1]
 gi|326413569|gb|ADZ70632.1| Phytoene synthase protein [Polymorphum gilvum SL003B-26A1]
          Length = 285

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 86/280 (30%), Positives = 135/280 (48%), Gaps = 2/280 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S D  +    +   D DRYL  L +P  +R  L  LY F+ E+ RVR+   +P+  ++R
Sbjct: 1   MSSDFDYAQDLVYRHDRDRYLCALFAPAEHRPGLMALYAFNLEIARVRELVSDPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D    +       S +P +  L   + +Y LP +  + +I+A  FD Y+D +   
Sbjct: 61  LQWWRDFLAGTAH--GDGSANPVAAALARTIERYRLPVEALIGLIDARVFDLYDDPMPTL 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E YA   +S LI LA ++L       +  V  +AG+A  +  L+  LP H  R QLY
Sbjct: 119 NDLEGYAGETASALIQLAAIVLADGEEPGTCDVAGHAGVAYALTGLMRALPWHAARRQLY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L   G+DRES   G  +  +  A+         +L + R  +  + P V PAF+P
Sbjct: 179 LPADLLDRHGVDRESLFRGVTTPELKAALAELHGHVRHHLGRVRGLVGRVSPTVAPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           V + E  LK  +  GF  +      +QL R W +  ++ +
Sbjct: 239 VCLVEPFLKQMERPGFDPLHSPRDLSQLRRQWIIWRAARR 278


>gi|45594395|gb|AAS68536.1| putative phytoene synthase [Homo sapiens]
          Length = 281

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 3/271 (1%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R  DY+ YL  LL P   R S+  L  F+ EL +V+D+        MR+Q+WK   E   
Sbjct: 14  RKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVEDIY 73

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P ++EL   V++++L  ++ + +++    +  + +  + K+ E+YA    S
Sbjct: 74  CDNP--PHQPVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENYAENTQS 131

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI    G+ 
Sbjct: 132 SLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVS 190

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQ 268
           +E FL       +   I   A     +L  AR   + +    FPAF+     E  LK  Q
Sbjct: 191 QEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQTVSLEDFLKKIQ 250

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              F I   S      + P Y+   S +K +
Sbjct: 251 RVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY 281


>gi|327269529|ref|XP_003219546.1| PREDICTED: UPF0551 protein C8orf38, mitochondrial-like [Anolis
           carolinensis]
          Length = 316

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 3/282 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                + +  +R  DY+ +L  LL P   ++S   L  F+ EL +++D+        MR+
Sbjct: 38  EEGQRYCVDLVRKRDYEGFLGSLLLPAESQLSAFALRAFNVELAQIKDSITQKTIGLMRI 97

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           Q+W+   E            P ++EL   V++ +L  ++ + +I+    +  +    D  
Sbjct: 98  QFWRKTVEDIYHDNP--PQQPVAIELWKAVKRQNLTKRWLMKIIDEREKNLDDRGYRDIS 155

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           + E YA    S L++L    L  +   A      + G AQ I   +   P H  RG+++ 
Sbjct: 156 ELEAYAENTQSALLYLILETLGVKDIHA-DHAASHIGKAQGIVTCLRATPYHASRGKIFL 214

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P+DI    G+ +E F+      ++   +   A     +L  AR   + +    FPAF+  
Sbjct: 215 PMDICMLHGVSQEDFIRRNREKKVQDVVYDIASQAHVHLEHARSFRKNVPAKAFPAFLCT 274

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              E  L   Q   F +   +      + P ++   S KK +
Sbjct: 275 VAIEDYLSQIQKVDFNVFHPNLHRKNTLLPLHLYIRSWKKTY 316


>gi|288555918|ref|YP_003427853.1| phytoene/squalene synthase [Bacillus pseudofirmus OF4]
 gi|288547078|gb|ADC50961.1| phytoene/squalene synthase [Bacillus pseudofirmus OF4]
          Length = 279

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 5/276 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +        +R        A    P   R ++  +Y F  E+  + D   NP      
Sbjct: 4   IEQAYNDCYEVIRRHSKTFTKAFGTLPKEKRNAVWAVYAFCREVDDIVDEGDNPKEELTH 63

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
            +          K  + ES     + L  +  ++++    F DMI     D         
Sbjct: 64  FEE-TFELFLQRKLPLVESK---WIALDDVFSRFEMDQVAFYDMIRGQRMDLEKTKYTTL 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++ EHY++ ++S +  +   IL  + + +        G+A  +  ++  +     R ++Y
Sbjct: 120 EELEHYSYHVASTVGLMLLPILAPKNHESLRAGGVALGLAMQLTNILRDVQEDLDRDRIY 179

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-AFI 255
            P D++   G        G N+       +  AE       +A + M     D       
Sbjct: 180 LPYDLMKKHGYSLVDLHMGINNSSFVKVFEEVAERAEMLYEQALDTMEGYPLDSRLQVKG 239

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
              +  ++L+  + + + +    H   Q  +   +L
Sbjct: 240 SALLYRAILQSIRKNNYNVFKTRHYVTQEEKDAILL 275


>gi|323449939|gb|EGB05823.1| hypothetical protein AURANDRAFT_30247 [Aureococcus anophagefferens]
          Length = 372

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 97/293 (33%), Gaps = 17/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                       +      Y          + ++  +Y +      + D+    +    R
Sbjct: 76  LRNAYQRCGEITKIFSKTFYFGTTFFSESKKTAVWAIYVWCRRTDDIVDSPLAAMLGPER 135

Query: 77  ----LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDL-PNQYFLDMIEAHF-----F 126
               L+ WK+  +   K  + E      + L    R+Y       ++DMI+         
Sbjct: 136 MTEDLRLWKERLD---KIWVGEPTDALDLALADAKRRYPDLDMAPYVDMIDGMLMDTPGH 192

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY---SASLRVIKYAGIAQFIGQLI 183
           + + D     ++   Y +R++  +  +   +L          S+      GIA  I  ++
Sbjct: 193 EIFQDRYETWEELYLYCYRVAGTVGLMVLPVLGCAEGYTLEESIPPGLSLGIAFQITNIL 252

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P + +   G+  +  + G   D     IK   +    Y  +AR  +
Sbjct: 253 RDVGEDALRGRIYLPREDMAKFGVTEKQIMDGIVDDNYKNLIKFEIDRAEAYYVEARTGI 312

Query: 244 RYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             + P    A  + +++   +L+  + + +         ++  +   +  S +
Sbjct: 313 PMLDPQARLAVEVALNVYRGILRKLEENDYDNFRKRAYVSKPEKFLMLPQSWM 365


>gi|309379977|emb|CBX21388.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 290

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 89/280 (31%), Gaps = 7/280 (2%)

Query: 21  SLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
             +  +   +     +L+         R +++ LY F  EL  V D   NP      L W
Sbjct: 4   LDYCRQKAEE-SRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNW 62

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+   +    G +     P +  L  +   + LP      +I+    D         ++ 
Sbjct: 63  WRGDLDKVFGGTM--PEHPVNQALQQVKETFKLPKYELEALIDGMQMDLVQARYGSFEEL 120

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y  R++  +  L   IL        L      G+A  +  +I  +      G++Y P+
Sbjct: 121 KLYCRRVAGVVGCLIARILGFSDGKT-LEYADKMGLALQLTNIIRDVGEDARNGRIYLPM 179

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVS 258
           + +    +     L    +D  +  +    +   +   +A   +            +  +
Sbjct: 180 EEMQQFDVPAGVILQCSPTDNFAELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAA 239

Query: 259 ITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
           +  ++L      G   ++ +        +    L + +  
Sbjct: 240 VYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|319794084|ref|YP_004155724.1| squalene synthase hpnd [Variovorax paradoxus EPS]
 gi|315596547|gb|ADU37613.1| squalene synthase HpnD [Variovorax paradoxus EPS]
          Length = 279

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 95/278 (34%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V           Y A L  P   R +++  Y F  E+  V D   +P     +L WW+
Sbjct: 5   QYVQDKAAASGSSFYYAFLFLPKPRRAAITAFYAFCREVDDVVDEVSDPGVAATKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                +          P  + L+     Y +  +  L++I+    D       D      
Sbjct: 65  TEVAQAFA---GTPRHPVMLALMPHAAAYGIEARQLLEVIDGCQMDLDQTRYLDFPGLAR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I        +       G+A  +  ++  +     RG++Y P++ 
Sbjct: 122 YCHLVAGVVGEVAARIFGQTDPQTTA-YAHKLGLALQLTNILRDVGEDALRGRIYLPVNE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L    +     L+  +SDR    +K  AE       +A   +         P  +  SI 
Sbjct: 181 LQQFDVKAHEILNRVHSDRFVALMKFQAERAHAAYDEALALLPVADRRTQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+  +   F++++   +   + + W         R
Sbjct: 241 RTLLREIERDDFQVLNQRVSLTPVRKFWLAWKVQALGR 278


>gi|116620389|ref|YP_822545.1| farnesyl-diphosphate farnesyltransferase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116223551|gb|ABJ82260.1| farnesyl-diphosphate farnesyltransferase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 279

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 103/279 (36%), Gaps = 7/279 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                  + LR  R    + Y + +L     R ++  +Y F      + D          
Sbjct: 4   TIDESYEYCLRVARTRAKNFYYSFVLLSTQQRKAMCAIYAFMRYCDDLSDEPGASKAAVD 63

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           R   W+   E + +G   +   P        VR++ +P++YF  MI+    D     +  
Sbjct: 64  R---WRADLEQALEGRFTD--HPVWPAFHHTVRRFGIPHEYFRQMIDGIQSDLEPRRLET 118

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            ++   Y +R++S +      I   +  SA L + +  G+A  +  ++  +      G++
Sbjct: 119 FEELYLYCYRVASVVGLTIIHIFGFDTRSA-LPLAEKCGVAFQLTNILRDIQEDAALGRI 177

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P + L   G+  E   +G+ S      ++  A     Y  ++   +  I P    +  
Sbjct: 178 YIPAEDLRRFGVTEEDLRAGKRSPEFLELMRFEAARARTYYNESLPLLELIHPRSRSSLW 237

Query: 256 PVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +  I   +L+   +  + + +     N   + W ++ +
Sbjct: 238 ALISIYSRLLERIVSKNYDVFTRRVRLNLFEKSWIVVKA 276


>gi|296122492|ref|YP_003630270.1| squalene synthase HpnC [Planctomyces limnophilus DSM 3776]
 gi|296014832|gb|ADG68071.1| squalene synthase HpnC [Planctomyces limnophilus DSM 3776]
          Length = 323

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 99/299 (33%), Gaps = 12/299 (4%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           +     +    +  +       +  L  LL P         +Y F      + D   +P+
Sbjct: 24  RSACTLAEAESYCRKLATGHYENFPLVSLLLPKKLHQPFFNVYAFCRWSDDLGDEINDPV 83

Query: 72  TRDMRLQWWKDIFESSTKGLIAES-------ISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
                LQWW++      +   ++          P  + L   ++++ +P Q F+D+I A 
Sbjct: 84  RSLQLLQWWREQMVLCHQAASSQELSGEISLAHPVMIALQKTIQEFGIPLQPFVDLISAF 143

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             D         +   +Y  R ++ +  L   +   +    ++           +     
Sbjct: 144 EQDQCQTRYETFEDLLNYCERSANPVGRLVLYL-GRDVSEQNVFWSDAICTGLQLANFWQ 202

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +   Y  G++Y PL  +   G+  E+     +++     +    E    +  K +  + 
Sbjct: 203 DVARDYLIGRIYLPLAEMKEFGVSEETIRERISTEAFQKLMTFQVERTRLFFEKGKPLVN 262

Query: 245 YILPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQL---VRPWYMLSSSIKKRF 299
           ++  D+     + +   E +L       ++++       +          L  S++KRF
Sbjct: 263 HVTNDLRLDVDLFIRGGECILDKIARIKYRVLETRPKVTKWDGGRLLIMALGRSLRKRF 321


>gi|264677382|ref|YP_003277288.1| Squalene/phytoene synthase [Comamonas testosteroni CNB-2]
 gi|299533080|ref|ZP_07046466.1| Squalene/phytoene synthase [Comamonas testosteroni S44]
 gi|262207894|gb|ACY31992.1| Squalene/phytoene synthase [Comamonas testosteroni CNB-2]
 gi|298718965|gb|EFI59936.1| Squalene/phytoene synthase [Comamonas testosteroni S44]
          Length = 279

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 97/278 (34%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V           Y A L  P   R +++  Y F  E+  V D   +P     +L WWK
Sbjct: 5   QYVQDKAASSGSSFYYAFLFLPKERRAAITAFYAFCREVDDVVDEVTDPGVAATKLAWWK 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                +     ++S  P    L+   + Y +  ++   +IE    D       D    + 
Sbjct: 65  TEVHRAF---TSQSAHPVMQALMPHAKTYGIEERHLQAVIEGCQMDLDQTRYLDFAGLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I   +    +       G A  +  +I  +     RG++Y P+  
Sbjct: 122 YCHLVAGVVGEVAARI-FGQTEERTTEYAHTLGQALQLTNIIRDVGEDAMRGRIYLPISE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +        + SDR +  ++  AE       KA   +         P  +  SI 
Sbjct: 181 LQQFDVKAHEINKREYSDRFTALMRFQAERAHSLYDKALGLLPDADRHAQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+  ++  F+++    +   L + W +       R
Sbjct: 241 RTLLREIESENFQVLHQRISLTPLRKFWLVWKMQALGR 278


>gi|221068429|ref|ZP_03544534.1| squalene synthase HpnD [Comamonas testosteroni KF-1]
 gi|220713452|gb|EED68820.1| squalene synthase HpnD [Comamonas testosteroni KF-1]
          Length = 279

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 97/278 (34%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V           Y A L  P   R +++  Y F  E+  V D   +P     +L WWK
Sbjct: 5   QYVQDKAASSGSSFYYAFLFLPKERRAAITAFYAFCREVDDVVDEVTDPGVAATKLAWWK 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                +     ++S  P    L+   + Y +  ++   +IE    D       D    + 
Sbjct: 65  TEVHRAF---TSQSAHPVMQALMPHAKTYGIEERHLQAVIEGCQMDLDQTRYLDFAGLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I   +    +       G A  +  +I  +     RG++Y P+  
Sbjct: 122 YCHLVAGVVGEVAARI-FGQTDERTTEYAHTLGQALQLTNIIRDVGEDAMRGRIYLPISE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +        + SDR +  ++  AE       KA   +         P  +  SI 
Sbjct: 181 LQQFDVKAHEINKREYSDRFTALMRFQAERAHSLYDKALGLLPDADRHAQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+  ++  F+++    +   L + W +       R
Sbjct: 241 RTLLREIESENFQVLHQRISLTPLRKFWLVWKMQALGR 278


>gi|320335071|ref|YP_004171782.1| Phytoene synthase [Deinococcus maricopensis DSM 21211]
 gi|319756360|gb|ADV68117.1| Phytoene synthase [Deinococcus maricopensis DSM 21211]
          Length = 287

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 84/285 (29%), Gaps = 4/285 (1%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           +EE + +R         R      Y      P   R ++  +Y    E   + D +    
Sbjct: 2   REEHLPARAIERCRDQTRAHSKTFYFGSRFFPRAQRQAVWAVYAACREGDDIADESPAWD 61

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                  WW  +           S    S  L    R Y +P   F ++ E    D    
Sbjct: 62  RAAHLDAWWARV---RRALNGEGSGDHVSDALAWAARTYPIPESAFEELYEGLRMDLAGH 118

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
           +    +  E Y  R++  +  +   I   +   A+L+     G A  +  ++  +   + 
Sbjct: 119 AYDTAEDLELYCRRVAGVVGFMIAPISGFDGGDATLQHALRLGQAMQLTNILRDVGEDWA 178

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           R ++Y P  +L   G+ R     G  +      ++        +  + R  +  +     
Sbjct: 179 RERVYLPQTLLEQYGVTRTMLARGTVTPEYRALMRHLCAQARTWYAQGRAGIPRLHGGGR 238

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                     E +L   + + +   +     +   +   +     
Sbjct: 239 LAVAAAARAYEGILDALERNDYDNFNARAHVSGTRKLLLLPQVWW 283


>gi|320103108|ref|YP_004178699.1| Phytoene synthase [Isosphaera pallida ATCC 43644]
 gi|319750390|gb|ADV62150.1| Phytoene synthase [Isosphaera pallida ATCC 43644]
          Length = 337

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 81/277 (29%), Gaps = 6/277 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           SR         R      + A    P   R     +Y F        D AR+P     R+
Sbjct: 27  SRGMAICRGITRRYARTFHFASHCLPREVRTHAYAVYGFCRWADNAVDDARDPSEALARI 86

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +  +   + +                   VR+  +P Q F  +++    D   +   D  
Sbjct: 87  ERARQALDDAYGTAPVSDG---LRAFRWTVRRRGIPRQPFDALLDGMAMDLTINRYPDAA 143

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             + Y  R++  +  + + +     +   L      G A  +  ++  +       ++Y 
Sbjct: 144 ALDLYCHRVAGVVGIIMSYVFGFR-HERCLVHADQLGRAMQLTNILRDVAEDLSMSRIYL 202

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP--DVFPAFI 255
           P D L   G+        + ++     +  +     +    +   +  ++         +
Sbjct: 203 PQDSLARHGVTESDLGQARVTEGFRRLMAEWIGRARELYRASDAGIPDLIGWSSRLTVKV 262

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             ++   +L   +   + +  H        +   ++ 
Sbjct: 263 MGNLYGGILDEIEALDYDVFHHRAHVTTSRKLIRLIR 299


>gi|194462455|gb|ACF72683.1| phytoene synthase 1 [Triticum aestivum]
          Length = 275

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 84/265 (31%), Gaps = 9/265 (3%)

Query: 38  ACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESIS 97
             LL     R ++  +Y +      + D           L  W+   E            
Sbjct: 1   GTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQALDRWERRLEDLFA---GRPYD 57

Query: 98  PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMI 157
                L   + ++ +  Q F DMI+    D       +  +   Y + ++  +  ++  +
Sbjct: 58  MLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNFDELYMYCYYVAGTVGLMSVPV 117

Query: 158 LDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           +           +        G+A  +  ++  +     RG++Y P D L   GL  E  
Sbjct: 118 MGIAPESKATAESVYGAALALGLANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDI 177

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHG 271
             G  +D+    +K   +    +  +A   +  +  +   P +  + +   +L   + + 
Sbjct: 178 FRGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESRWPVWASLLLYRQILDEIEAND 237

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIK 296
           +   +      +  +   +  +  +
Sbjct: 238 YNNFTRRAYVGKAKKVLALPVAYGR 262


>gi|156543229|ref|XP_001606516.1| PREDICTED: similar to LOC569692 protein [Nasonia vitripennis]
          Length = 303

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/296 (22%), Positives = 116/296 (39%), Gaps = 9/296 (3%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           L+++  +T++        + + L  +R  DY+ +L  LL P   R S   +  F+TE+  
Sbjct: 17  LRWIKTSTKQTP------AEYCLDLVRKHDYENFLCTLLLPNNLRSSAFAIRAFNTEVAL 70

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           V D AR+     MR+++W++              +P S+EL  ++++  L  QYF  +IE
Sbjct: 71  VEDQARDSKIALMRIKFWEETLNQIYADKP--PKNPTSLELHRVLQKTKLTKQYFKRLIE 128

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQL 182
           A F      +    +  E YA    S + +L       +          + G A  I  L
Sbjct: 129 ARFNKLNLSTFPSLESLEKYAEHTVSSVYYLILEAHGIKDIDT-DHFASHLGKAHGIVTL 187

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           I  +P +    ++  P DIL    +  ES L G +S  +   I   +    ++L  A   
Sbjct: 188 IRSVPHNAKCRKMVLPQDILMKYNVSSESVLQGTSSKELKDVIFEVSSRAKQHLDMALSL 247

Query: 243 MRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              I     P F+   I E  L   Q   F + +        + P  +    +  R
Sbjct: 248 KTRIKKGSHPVFLSHIIVEEYLIKLQKFDFDVFNPKLQKRNSLLPLKLYWKKLFNR 303


>gi|319638703|ref|ZP_07993463.1| phytoene synthase [Neisseria mucosa C102]
 gi|317400087|gb|EFV80748.1| phytoene synthase [Neisseria mucosa C102]
          Length = 282

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 88/280 (31%), Gaps = 5/280 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              +  +   +                R +++ LY F  EL  V D   +     + L W
Sbjct: 3   ALDYCRQKAAESHSSFLSGFRFLSVEKRNAITVLYAFCRELDDVVDGCTDLNVAQITLNW 62

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+   E      +     P    L  I   +DLP   F  +I+    D          + 
Sbjct: 63  WRSDLEKVFNNEM--PEHPVHQALKDIRASFDLPKNEFEALIDGMQMDLEQARYGSFDEL 120

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y  R++  +  L   IL        L      G+A  +  +I  +     +G++Y P+
Sbjct: 121 KLYCHRVAGVVGRLIARILGFSNPKT-LEYADKMGLALQLTNIIRDVGEDARQGRIYLPI 179

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVS 258
           + +    +     +  + +D  +  ++       +   +A   +            I  +
Sbjct: 180 EEMQKFDVPANVIMQCKPTDNFAKLMQFQVNRARETYREAMLLLPAEDKKSQKVGLIMAA 239

Query: 259 ITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
           I  ++L      G   ++++        +    L + +  
Sbjct: 240 IYYALLNEIDRDGAQNVLTYKIAIPSPRKKRIALKTWLFG 279


>gi|269213616|ref|ZP_05982387.2| squalene synthase HpnD [Neisseria cinerea ATCC 14685]
 gi|269146115|gb|EEZ72533.1| squalene synthase HpnD [Neisseria cinerea ATCC 14685]
          Length = 313

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 93/281 (33%), Gaps = 5/281 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           +   +  +   +            P   R +++ LY F  EL  + D   +P      L 
Sbjct: 33  QGLDYCRQKAEESRSSFLSGFRFLPQEKRDAITVLYAFCRELDDIADDCSDPNVAQATLN 92

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW+   +    G++     P +  L  I   +DLP      +I+    D         ++
Sbjct: 93  WWRGDLDRVFCGMM--PEHPVNQALRQIKETFDLPKYELEALIDGMQMDLVQARYGSFEE 150

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            + Y  R++  +  L   IL        L      G+A  +  +I  +      G++Y P
Sbjct: 151 LKLYCHRVAGVVGCLIARILGFSDNQT-LEYADKMGLALQLTNIIRDVGEDARNGRIYLP 209

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPV 257
           ++ +    +     L  + ++  +  +    +   +   +A   +         A  +  
Sbjct: 210 MEEMQWFDVPANVILQCRPTENFTELMAFQIKRARETYCEAVSLLPAADKKSQKAGLVMA 269

Query: 258 SITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKK 297
           ++  ++L      G   ++++        +    L + +  
Sbjct: 270 AVYYALLNEIDFDGVQNVLTYKIAIPSPRKKRIALKTWLFG 310


>gi|254804961|ref|YP_003083182.1| putative poly-isoprenyl transferase [Neisseria meningitidis
           alpha14]
 gi|254668503|emb|CBA05855.1| putative poly-isoprenyl transferase [Neisseria meningitidis
           alpha14]
          Length = 290

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 85/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQKKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +            P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGEMPEHPVNQALQQVKETFKLPKYELEALIDGMQMDLAQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +      G++Y P++
Sbjct: 122 LYCHRVAGVVGCLIARILGFSDGKT-LEYADKMGLALQLTNIIRDVGEDARNGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L  + ++  +  +    +   +   +A   +            +  ++
Sbjct: 181 EMQRFDVPASVILQCRPTENFTELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|172056775|ref|YP_001813235.1| squalene/phytoene synthase [Exiguobacterium sibiricum 255-15]
 gi|171989296|gb|ACB60218.1| Squalene/phytoene synthase [Exiguobacterium sibiricum 255-15]
          Length = 275

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 101/280 (36%), Gaps = 9/280 (3%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
               +   L   + ++      Y A  L P   R+++  +Y F   L    D +  P   
Sbjct: 1   MDTVTNAYLVCEQTIQGGSKTFYKAFSLLPKQDRMAVYAIYTFCRHLDDTVDESATPKES 60

Query: 74  DMRLQWWKDIFESSTKGLIAESIS-PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                   +  E         SI+ P  + L  + ++Y++    FL++ E   +D   + 
Sbjct: 61  LA------EFLEEFRLFRSGNSINKPLWIALADVFKRYEMDETPFLELAEGMRWDIEKNR 114

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               ++ E Y++ ++S +  +   IL  ++           GIA  +  ++  +     R
Sbjct: 115 YHSLEETEKYSYYVASTVGLMLLPILAPKQND-LRESAIQLGIAMQLTNILRDVGEDAKR 173

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G++Y P D +   G+  ES L+G  S   +   +  A         A         +   
Sbjct: 174 GRIYLPKDWMDQYGVTTESLLAGTPSGDFAGLWEALALRAEHLYDAATPSFDRYPKESRR 233

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
           A  +   +   +L  A+++ + + +     ++  +   + 
Sbjct: 234 ALKVAALLYRGILDAARDNQYDVFTKRAYVSRWQKMKLLA 273


>gi|148241338|ref|YP_001226495.1| phytoene synthase [Synechococcus sp. RCC307]
 gi|147849648|emb|CAK27142.1| Phytoene synthase [Synechococcus sp. RCC307]
          Length = 309

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 101/293 (34%), Gaps = 17/293 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-- 74
             +                YL  LL PP  R ++  +Y +      + D+          
Sbjct: 15  LEQAYEDCRVETERWAKTFYLGTLLMPPAKRRAIWAIYVWCRRTDELMDSPEAQALPVAE 74

Query: 75  --MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL  W+        G + + +     ++   +  Y  P + +L+MIE    D     
Sbjct: 75  LSARLDAWEQRTRELFAGQVRDGLDRVMADV---IEHYPQPLEAYLEMIEGQRMDLAKHR 131

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFIGQLI 183
             D  + + Y FR++  +  +   ++  +    +    +           GIA  +  ++
Sbjct: 132 YSDFAELKQYCFRVAGTVGLMTQEVMGLDPAYTTAPWSERPDTSEAAVALGIANQLTNIL 191

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P + L   G      ++G  ++     +    E    +  ++   +
Sbjct: 192 RDVGEDRGRGRIYLPQEDLQRFGYSEAELMAGTLNENWRALMAFQLERARDWFARSEAGV 251

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           R++ PD   P +  + +   +L   +   + + +H     ++ +   +  S +
Sbjct: 252 RWLAPDARWPVWTSLRLYRGILDAIERLNYDVFNHRAYVPRVGKLMDLPLSYL 304


>gi|118594789|ref|ZP_01552136.1| Squalene/phytoene synthase [Methylophilales bacterium HTCC2181]
 gi|118440567|gb|EAV47194.1| Squalene/phytoene synthase [Methylophilales bacterium HTCC2181]
          Length = 282

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 113/276 (40%), Gaps = 6/276 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +  +    +  L  L      +++L+ LY F  E+  + D  ++  T   RL  W+
Sbjct: 5   QYCFQKTQSSKSNFALGFLFLTKQKKMALTALYAFCREVDDIVDECKDYKTGKRRLDAWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              +   +    +   P S  LL  +  Y+L  +YFL++I+    D       + KQ + 
Sbjct: 65  VEIDRLFE---KKPQHPVSRALLPHLSTYNLSKEYFLEIIDGMEMDLNFHRYENFKQLQL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R +S +  L+  I         L+     GIA  +  +I  L    HRG++Y PLD+
Sbjct: 122 YCYRAASVVGLLSARIFGFTNKDT-LKYAHDLGIALQLTNIIRDLGEDAHRGRIYVPLDL 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSIT 260
           L    L  +  LS + + +++L +K   +    +   A   +         P  I  +I 
Sbjct: 181 LDQFSLTEDDILSSKRNGKLTLLVKHLGDQANDFYRSAMRRLPKEDVRKQLPGLIMGNIY 240

Query: 261 ESVLKHAQNH-GFKIVSHSHTPNQLVRPWYMLSSSI 295
            ++L+   ++    I++ S   + + +     ++  
Sbjct: 241 YALLRKVVSNEPDNILNISTGLSPIKKILVATTTFF 276


>gi|88807088|ref|ZP_01122600.1| phytoene synthase [Synechococcus sp. WH 7805]
 gi|88788302|gb|EAR19457.1| phytoene synthase [Synechococcus sp. WH 7805]
          Length = 302

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 99/298 (33%), Gaps = 17/298 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R              R   +     YL  LL P   R ++  +Y +      + D+   
Sbjct: 1   MRLSTPDLDAAFEACRRETAEWAKTFYLGTLLLPAEKRRAIWAIYVWCRRTDELMDSEEA 60

Query: 70  PITRDM----RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                     RL  W+    +  +G + + +    V+    + ++    Q +LDMIE   
Sbjct: 61  QSRSVQELSDRLDQWEHKTRALFRGEVRDDLDAVMVD---TLERFPQGIQPYLDMIEGQR 117

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIA 176
            D         +  + Y +R++  +  +   ++  +    S                GIA
Sbjct: 118 MDLTWTRYPCFEDLKLYCYRVAGTVGLMTQGVMGVDDAYTSAPWSDRPDTSDAAIALGIA 177

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  ++  +     RG++Y P + L   G   +  L+G+ +      +    +    + 
Sbjct: 178 NQLTNILRDIGEDRGRGRIYLPQEDLDYFGYSEDDLLAGKLNQSWKDLMAFQLQRARDWF 237

Query: 237 FKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            ++   +R++  D   P +  + +   +L   +   + + +      +  +   +  S
Sbjct: 238 DRSEAGVRWLSRDARWPVWTSLRLYRGILDVIERQEYDVFNARAYVGKFDKFLDLPRS 295


>gi|291230690|ref|XP_002735300.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 272

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 3/274 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             ++  DY+ +L  LL P   R +   L  F+ ++  V+D   +     MR+Q+WK+   
Sbjct: 2   DVVKKHDYENFLCTLLLPKNARTATFALRAFNVDVATVKDNTSDIKIAQMRMQFWKETIN 61

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
              +G      +P + EL   V  + L  ++F  +IE    + ++ +    +  E+ A +
Sbjct: 62  EIYQGSP--RQTPIACELHRAVASHKLSKRWFSRIIEERERNLHDKAHASLEDVENSAEK 119

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            +S L++L    L  +  +A      + G +  I  L+   P H  R ++Y P++IL   
Sbjct: 120 TTSSLLYLILETLGLKDVNA-DHAASHIGKSHGIVTLLRSTPHHASRRRVYLPMEILIKY 178

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
           G+ +E  L G+    +  A+   A     +L KA+   + I  + + AF+  +  E  LK
Sbjct: 179 GVSQEQILRGKTEQNLKDAVFEIASQANSHLQKAQSMKKEIPKEAYSAFLLTTPIEIYLK 238

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             Q   F +   +      + P+ + + S++  +
Sbjct: 239 KIQQSDFDVFHPTLQQKNTMLPFKLWTKSMRSAY 272


>gi|219888513|gb|ACL54631.1| unknown [Zea mays]
          Length = 272

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 89/269 (33%), Gaps = 10/269 (3%)

Query: 35  RYLA-CLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
            Y++   L  P  R ++  +Y +      + D           L  W+   E   +    
Sbjct: 2   FYVSGTQLMTPERRKAVWAIYVWCRRTDELVDGPNASYITPTALDRWEKRLEDLFE---G 58

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
                +   L   V ++ +  Q F DM++    D +        +   Y + ++  +  +
Sbjct: 59  RPYDMYDAALSDTVSKFPVDIQPFKDMVQGMRLDLWKSRYMTFDELYLYCYYVAGTVGLM 118

Query: 154 ATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
              ++           +        GIA  +  ++  +     RG++Y PLD L   GL 
Sbjct: 119 TVPVMGIAPDSKASAESVYNAALALGIANQLTNILRDVGEDARRGRIYLPLDELAQAGLT 178

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHA 267
            E    G+ + +    +K   +    +  +A + + ++      P    + +   +L   
Sbjct: 179 EEDIFRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDAI 238

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           + + +   +      +  +   +  +  +
Sbjct: 239 EANDYNNFTKRAYVGKAKKLLSLPLAYAR 267


>gi|27379843|ref|NP_771372.1| phytoene synthase [Bradyrhizobium japonicum USDA 110]
 gi|27352996|dbj|BAC49997.1| bll4732 [Bradyrhizobium japonicum USDA 110]
          Length = 287

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 4/281 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               F    +R  D+ RY+A L +P   R +L  LY F+ E++RVRD    P+  ++RLQ
Sbjct: 9   DSVAFCADLVRSHDFPRYVATLFAPAAERRALLALYAFNVEIVRVRDQVSQPLPGEIRLQ 68

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW D+         +   +P + ELL  +R +DLP +    + + H FD YND +     
Sbjct: 69  WWTDMLAG--HVHGSAEGNPVAAELLRAIRDFDLPVEPLSLLADEHQFDLYNDPMPTMAA 126

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            E Y    SS L  LA  I+      A   + ++AG+AQ I Q+I  LP      QL+ P
Sbjct: 127 LEGYLAATSSALFMLAARIMGPPS-EAVEHLARHAGLAQGIVQVIVNLPRDAAHRQLFLP 185

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
             +L +   + E   + + +  +   ++  A    ++   A   +      V PAF+P+S
Sbjct: 186 QQVLASHNCNMEDVFASRQTPNLHAVLEQLAGEARQHATTASSLLAQAPSSVRPAFLPLS 245

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             ++ LK     G    +   + ++L   W +  +S  + F
Sbjct: 246 QAQADLKRLARPGRNPFAPQPS-SRLRTLWTLWRASRSREF 285


>gi|308389275|gb|ADO31595.1| putative poly-isoprenyl transferase [Neisseria meningitidis
           alpha710]
 gi|319410433|emb|CBY90792.1| phytoene synthase [Neisseria meningitidis WUE 2594]
 gi|325136333|gb|EGC58941.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M0579]
          Length = 290

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 85/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQKKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +            P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGEMPEHPVNQALQQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +      G++Y P++
Sbjct: 122 LYCHRVAGVVGCLIARILGFSDSKT-LEYADKMGLALQLTNIIRDVGEDARNGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L  + ++  +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPASVILQCRPTENFTELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|161870016|ref|YP_001599185.1| phytoene synthase, putative [Neisseria meningitidis 053442]
 gi|161595569|gb|ABX73229.1| phytoene synthase, putative [Neisseria meningitidis 053442]
          Length = 290

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 86/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  + +L   IL        L+     G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCHRVAGVVGYLIARILGFSDGKT-LQYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
              +L      G   ++ +        +    L + +  
Sbjct: 241 YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|288942271|ref|YP_003444511.1| Phytoene synthase [Allochromatium vinosum DSM 180]
 gi|288897643|gb|ADC63479.1| Phytoene synthase [Allochromatium vinosum DSM 180]
          Length = 356

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 95/287 (33%), Gaps = 7/287 (2%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            NT+K     + D       LR      Y A  L P  +R     LY F        D  
Sbjct: 9   NNTKKTHAT-AADIAACRELLRCGSRSFYAASFLLPARFRDPAIALYAFCRIADDAIDCV 67

Query: 68  -RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
             +P+ +   L+   D  +    G   +   P    L  +VR + +P +    + E   +
Sbjct: 68  GDDPVLQAEALEMLNDRLDRLYAGTPID--DPIDRALADVVRDFAIPKRLLEALFEGFEW 125

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
           D+      D      Y+ R++  +  +   ++ +       R     G+A  I  +   +
Sbjct: 126 DAEGRRYEDLSGIYDYSARVAGTVGAMMAALMGARSEEMVARACD-LGVAMQITNICRDV 184

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 G++Y PL  +   G+D + +L +   ++ I+  ++   +   +   ++   +  
Sbjct: 185 GEDARNGRIYLPLSWVREAGVDPDEWLKNPVFNEAIASVVRRLLQTADELYQRSDAGIAG 244

Query: 246 ILPDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
           +             +   + +  +  G   +S         +   + 
Sbjct: 245 LPLGCRAGINAARYLYAEIGRQVERQGLDSISQRAVVPAPRKLQLLA 291


>gi|239635830|ref|ZP_04676854.1| dehydrosqualene synthase [Staphylococcus warneri L37603]
 gi|239598608|gb|EEQ81081.1| dehydrosqualene synthase [Staphylococcus warneri L37603]
          Length = 287

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 102/280 (36%), Gaps = 11/280 (3%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
               +    +  + ++        A  L P   R ++  +Y     +    D  +NP   
Sbjct: 1   MTTVNESYKYCHQIMKKYSKSFSYAFDLLPESERRAVWAVYAVCRIIDDSIDEEQNPQ-- 58

Query: 74  DMRLQWWKDIFESSTKGLIAESISP-----FSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
             +LQ  K+  +      +             +      + Y +  Q F ++IE+ F D 
Sbjct: 59  --KLQAIKEDIQLIQSQQVDSPDQFKSNQRIMLAFYDTSQNYKMEYQSFYNLIESVFEDE 116

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++   Y + ++  +  + + IL  +    +  V +  G A  +  ++  +  
Sbjct: 117 HFEMFVKDEELMRYCYGVAGTVGEVLSPILTEQPSDETYEVARELGEALQLTNILRDVGE 176

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            + +G++YF  ++L    ++ E     Q +D      + +A++  K    A + +    P
Sbjct: 177 DFEKGRIYFSQEMLNQYDVNIEDVYQHQPTDNYINLWEHYAQIAEKDYQFALDHLHVFKP 236

Query: 249 DVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
           +      +   I + ++   + +G+  +      ++L + 
Sbjct: 237 EARSIIELAARIYKGIIDEVREYGY-PLHRRVYVSRLDKL 275


>gi|61653237|gb|AAX48190.1| phytoene synthase [uncultured proteobacterium DelRiverFos06H03]
          Length = 352

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 98/285 (34%), Gaps = 8/285 (2%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           KE    S D    +  ++      + A  L PP  R +   LY F      + D A    
Sbjct: 2   KELDFDSHDLQACVAMMQGGSKTFFAASRLLPPRIRTAAIALYAFCRVADDLVDEAAPGD 61

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
           T  + LQ      ++       +        L  +V+QY LP      +IE   +D+   
Sbjct: 62  TPLVVLQA---RLDAIYASTPHD--HVEDHALSLLVQQYKLPRHLLDALIEGFAWDAAGR 116

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
           +    +    Y  R++  +  +   I+ +       R  +  G+A  +  +   +     
Sbjct: 117 TYDSIEDLHAYGARVAGSVGAMMAWIMGTHNMDTLARACE-LGVAMQLTNIARDVGHDAS 175

Query: 192 RGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+LY P   L   G+D +++L+  + +  I+  +        +   +A   +  + PD 
Sbjct: 176 IGRLYLPRQWLFEAGIDPDAWLAQPKFTHSIAQVVTRLLGEADRLYKQAHSGIAALPPDC 235

Query: 251 FPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             A      I   +    +  G   V+     +   +   + S+ 
Sbjct: 236 RAAICAASMIYAEIGHQLRREGLDSVNKRTVVSTTRKLMLLASAW 280


>gi|109390035|gb|ABG29736.1| phytoene synthase 1-B1 [Triticum turgidum subsp. durum]
          Length = 249

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 81/252 (32%), Gaps = 9/252 (3%)

Query: 33  YDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLI 92
              YL  LL     R ++  +Y +      + D           L  W+   E       
Sbjct: 1   KTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQALDRWERRLEDLFA--- 57

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
                     L   + ++ +  Q F DMI+    D       +  +   Y + ++  +  
Sbjct: 58  GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNFDELYMYCYYVAGTVGL 117

Query: 153 LATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           ++  ++           +        G+A  +  ++  +     RG++Y P D L   GL
Sbjct: 118 MSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDARRGRIYLPQDELAEAGL 177

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKH 266
             E    G  +D+    +K   +    +  +A   +  +  +   P +  + +   +L  
Sbjct: 178 SDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESRWPVWASLLLYRQILDE 237

Query: 267 AQNHGFKIVSHS 278
            + + +   +  
Sbjct: 238 IEANDYNNFTKR 249


>gi|254780161|ref|YP_003064574.1| phytoene synthase protein [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039838|gb|ACT56634.1| phytoene synthase protein [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 299

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL
Sbjct: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60

Query: 61  MRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDM 120
           MRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDM
Sbjct: 61  MRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDM 120

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIG 180
           IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIG
Sbjct: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIG 180

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
           QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR
Sbjct: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240

Query: 241 EEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           EEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF
Sbjct: 241 EEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299


>gi|261392554|emb|CAX50111.1| phytoene synthase [Neisseria meningitidis 8013]
          Length = 290

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 88/279 (31%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +    G +     P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVFGGTM--PEHPVNQALQQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L+     G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCRRVAGVVGCLIARILGFSDGKT-LQYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +D  +  +    +   +   +A   +            +  ++
Sbjct: 181 EMQRFDVPASVILQCSPTDNFAKLMAFQIKRARETYCEAVSLLPAADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDQDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|241759964|ref|ZP_04758063.1| squalene synthase HpnD [Neisseria flavescens SK114]
 gi|241319650|gb|EER56070.1| squalene synthase HpnD [Neisseria flavescens SK114]
          Length = 282

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 89/280 (31%), Gaps = 5/280 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              +  +   +                R +++ LY F  EL  V D   +P    + L W
Sbjct: 3   ALDYCHQKAAESHSSFLSGFRFLSLEKRNAITVLYAFCRELDDVVDGCTDPNVARITLNW 62

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+   E      +     P    L  I   +DLP   F  +I+    D          + 
Sbjct: 63  WRSDLEKVFNNEM--PEHPVHQALKDIRSNFDLPKNEFEALIDGMQMDLEQARYGGFDEL 120

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y +R++  +  L   IL        L      G+A  +  +I  +     +G++Y P+
Sbjct: 121 KLYCYRVAGVVGCLIARILGFSNPKT-LEYADKMGLALQLTNIIRDVGEDARQGRIYLPI 179

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVS 258
           + +    +     +  + +D  +  ++       +   +A   +            I  +
Sbjct: 180 EEMQKFDVPANVIMQCKPTDNFAKLMQFQVNRARETYREAMLLLPAEDKKSQKVGLIMAA 239

Query: 259 ITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
           I  ++L      G   ++ +        +    L + +  
Sbjct: 240 IYYALLNEIDRDGAQNVLIYKIAIPSPRKKRIALKTWLFG 279


>gi|153009662|ref|YP_001370877.1| phytoene synthase [Ochrobactrum anthropi ATCC 49188]
 gi|151561550|gb|ABS15048.1| phytoene synthase [Ochrobactrum anthropi ATCC 49188]
          Length = 277

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 81/279 (29%), Positives = 142/279 (50%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            + +    L  LR  D DRYL+ L +P  +R  L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNENEAHCLALLRQADRDRYLSVLYAPEDHRGGLAALYAFNAEVARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L++ + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALINTIEKYELPRTAFDNYCEARIFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S +I LA  IL+ +   A   +  +AG+AQ +  L+  +PIH  RGQLY
Sbjct: 119 NDLEGYCGETASAIIQLAGFILNRDAAQAQTEITGHAGVAQAVTGLLRLMPIHRRRGQLY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L AVG+ RE+F++G++   +   I I      ++L    +    +   + PAF+P
Sbjct: 179 VPADMLQAVGVTRETFIAGEDKAAVERVISIMLAFAREHLAIFEKNKSQLPKSLVPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L+  +  G +        + + + W M  ++ 
Sbjct: 239 LALVPAYLRAIERLGAQAAEKVADISAIRKQWLMFRANF 277


>gi|160898013|ref|YP_001563595.1| squalene synthase HpnD [Delftia acidovorans SPH-1]
 gi|160363597|gb|ABX35210.1| squalene synthase HpnD [Delftia acidovorans SPH-1]
          Length = 281

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 95/278 (34%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V           Y A L  P   R +++  Y F  E+  V D   +P     +L WW+
Sbjct: 5   QYVQDKAAASGSSFYYAFLFLPRERRAAITAFYAFCREVDDVVDEVSDPGVAATKLGWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +    +      +   P    L+     Y +  ++   +I+    D       D +    
Sbjct: 65  NEVHQAFA---GKPSHPVMRALMPHAPVYGIEERHLQAVIDGCRMDLEQTRYLDFQGLTR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I    +   +       G+A  +  +I  +     RG++Y P+  
Sbjct: 122 YCHLVAGVVGEVAARIFGQTQEETTA-YAHKMGLAFQLTNIIRDVGEDAMRGRIYLPISE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L    +        + SDR +  ++  AE   +   +A   +         P  +  SI 
Sbjct: 181 LQQFDVKAHEITKREYSDRFTALMRFQAERAHRLYDEALALLPAADRRTQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+  +   F+++    +   L + W         R
Sbjct: 241 RTLLREIEADDFRVLHQRISLPPLRKLWLAWKMQALGR 278


>gi|164371620|gb|ABG29735.2| putative phytoene synthase 1-B1 [Triticum turgidum subsp. durum]
          Length = 249

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 81/252 (32%), Gaps = 9/252 (3%)

Query: 33  YDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLI 92
              YL  LL     R ++  +Y +      + D           L  W+   E       
Sbjct: 1   KTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQALDRWERRLEDLFA--- 57

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
                     L   + ++ +  Q F DMI+    D       +  +   Y + ++  +  
Sbjct: 58  GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYTNFDELYMYCYYVAGTVGL 117

Query: 153 LATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           ++  ++           +        G+A  +  ++  +     RG++Y P D L   GL
Sbjct: 118 MSVPVMGIAPESKATAESVYGAALALGLANQLTNILRDVGEDARRGRIYLPQDELAEAGL 177

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKH 266
             E    G  +D+    +K   +    +  +A   +  +  +   P +  + +   +L  
Sbjct: 178 SDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESRWPVWASLLLYRQILDE 237

Query: 267 AQNHGFKIVSHS 278
            + + +   +  
Sbjct: 238 IEANDYNNFTKR 249


>gi|332041226|gb|EGI77590.1| squalene synthase hpnd [Hylemonella gracilis ATCC 19624]
          Length = 297

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 96/291 (32%), Gaps = 13/291 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           S  + +V           Y A L  P   R +++  Y F  E+  V D   +      +L
Sbjct: 9   SSPAQYVQDKAAASGSSFYYAFLFLPAPRRAAITAFYAFCREVDDVVDEVNDAGVAAAKL 68

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
            WW+       +    +   P    L+  V  Y +  ++ L +IE    D       D  
Sbjct: 69  GWWRAEV---ARAWQGQPSHPVLQALMPHVTTYGIEARHLLAVIEGCEMDLQQSRYLDYP 125

Query: 138 QFEHYAFRISSRLIHLATMILDSER------YSASLRVIKYAGIAQFIGQLICQLPIHYH 191
             + Y   ++  +  +A  I                R     G+A  +  +I  +     
Sbjct: 126 GLQRYCHLVAGVVGEVAARIFGGHSGTDPTLDELRTRYAHTLGLAFQLTNIIRDVGEDAL 185

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL---- 247
           RG++Y P++ L    +     L+ Q S+R +  ++   E       +A      +     
Sbjct: 186 RGRIYLPINELQRFEVKAHEILNRQYSERFTALMRFQTERAQSLYDEALSLHAQMPSEER 245

Query: 248 PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
               P  +  SI  ++L+  +   F+++        L + W         R
Sbjct: 246 RAQKPGLMMASIYRTLLREIERDDFQVLHQRIGLTPLRKLWLAWKVQALGR 296


>gi|76443558|dbj|BAE45298.1| Phytoene synthase [Gentiana lutea]
          Length = 428

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 85/272 (31%), Gaps = 11/272 (4%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     Y    L  P  R+++  +Y +      + D         
Sbjct: 132 NVLNEAYDRCREVCAEYAKSFYWGTQLMTPERRLAIWAIYVWCRRTDELVDGLNASQINP 191

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   K    +        L   + +Y +  Q F DMIE    D       
Sbjct: 192 TALDRWEARLEDVFK---GQPFDMLDAALSDTITKYPVDIQPFRDMIEGMRMDLKKSRYK 248

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 249 NFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALSLGIANQLTNILRDVGED 308

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--- 246
             RG++Y P D L   GL  E   +G+  D+  + +K   +   K+   ARE +      
Sbjct: 309 ARRGRVYLPQDELAQAGLSDEDIFAGKVPDKWKIFMKKQIKRARKFYDDARERVPRTQLR 368

Query: 247 LPDVFPAFIPVSITESVLKHAQNHGFKIVSHS 278
             D             +L   + + +   +  
Sbjct: 369 RADCLCGAAFAFFIGKILDEIEANDYNNFNKK 400


>gi|194015076|ref|ZP_03053693.1| phytoene synthase [Bacillus pumilus ATCC 7061]
 gi|194014102|gb|EDW23667.1| phytoene synthase [Bacillus pumilus ATCC 7061]
          Length = 279

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 91/276 (32%), Gaps = 6/276 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                      ++      Y A  + P   R ++  +Y F  +   + D + +P      
Sbjct: 4   VQTALKLCEETIQTHSNTFYRAFSMLPKKKRQAVWAVYSFCRKADDIVDESPSP---KEE 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  +++ F+   +G + +   P  V L    +++ +    F D+++    D         
Sbjct: 61  LASFRETFDRFLQGEV-DRNDPMWVALAHTFQEFRMDEAPFHDLLQGQKMDLEQHRYETL 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQL 195
            +   Y++ ++S +  +   I+   +           GIA  +  ++  +      R ++
Sbjct: 120 DELLIYSYHVASTVGLMLLPIIAPRKKEQLKEAAISLGIAMQLTNILRDIGEDKAERDRI 179

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAF 254
           Y P  ++   G   +    G  +       +  A     Y  +  + +         P  
Sbjct: 180 YLPKQVMDQFGYTEQELQEGIINQAFQHVWEYIAFEAEAYYEEFFDHLHEFPLYSRIPVK 239

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                 +++L   + + +++ +     +   +   +
Sbjct: 240 AAAHFYKAILDKTRENEYRVFTQRSFISNQEKELIL 275


>gi|325134344|gb|EGC56990.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M13399]
 gi|325144451|gb|EGC66751.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M01-240013]
 gi|325206046|gb|ADZ01499.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M04-240196]
          Length = 290

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 85/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L+     G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCHRVAGVVGCLIARILGFSDGKT-LQYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
              +L      G   ++ +        +    L + +  
Sbjct: 241 YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|325202125|gb|ADY97579.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M01-240149]
 gi|325208121|gb|ADZ03573.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           NZ-05/33]
          Length = 290

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 86/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +      G++Y P++
Sbjct: 122 LYCHRVAGVVGCLIARILGFSDSKT-LEYADKMGLALQLTNIIRDVGEDARNGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L  + ++  +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPASVILQCRPTENFTELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|261400243|ref|ZP_05986368.1| squalene synthase HpnD [Neisseria lactamica ATCC 23970]
 gi|269210046|gb|EEZ76501.1| squalene synthase HpnD [Neisseria lactamica ATCC 23970]
          Length = 290

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 87/279 (31%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +    G +     P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVFGGKM--PEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVRARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L+     G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCHRVAGVVGCLIARILGFSDGKT-LQYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +D  +  +    +   +   +A   +            +  ++
Sbjct: 181 EMQRFDVPASVILQCSPTDNFAKLMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
              +L      G   ++ +        +    L + +  
Sbjct: 241 YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|271965294|ref|YP_003339490.1| Phytoene synthase [Streptosporangium roseum DSM 43021]
 gi|270508469|gb|ACZ86747.1| Phytoene synthase [Streptosporangium roseum DSM 43021]
          Length = 299

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 76/283 (26%), Gaps = 5/283 (1%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             +       R         YLA LL P   R  +  LY F      + D+      R  
Sbjct: 2   TLTSSYELCRRLNARHGRSYYLATLLLPAWKRPHVHALYGFARYADELVDSFTMTDDRAE 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L         +  G   +   P        VR + +        + +   D        
Sbjct: 62  ALDGLAGRLAEALAGGSVD--DPVLPAFAHTVRSFGIDRADIEHFLRSMRTDLTVSRYTT 119

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLR--VIKYAGIAQFIGQLICQLPIHYHRG 193
                 Y    ++ +  +   IL+     A       +  G+A  +   +  +     RG
Sbjct: 120 YDDLLRYMEGSAAAIGTMMLPILEPLPGMADRARGPARELGLAFQLTNFLRDVAEDLARG 179

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y PL  L    +          +  +   +    E    +   A E +  + P   P 
Sbjct: 180 RVYLPLADLDRFEVSVADLGDPHPTPALRRLLAFEIERARGHYRLALEGVELLTPSSRPC 239

Query: 254 FIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +    +   +L   +     ++    T  +  R        +
Sbjct: 240 VLAAYELYGGILDQIEAARHDVLGTRATVPRRRRLTVFARHLL 282


>gi|302864752|ref|YP_003833389.1| Phytoene synthase [Micromonospora aurantiaca ATCC 27029]
 gi|315501046|ref|YP_004079933.1| phytoene synthase [Micromonospora sp. L5]
 gi|302567611|gb|ADL43813.1| Phytoene synthase [Micromonospora aurantiaca ATCC 27029]
 gi|315407665|gb|ADU05782.1| Phytoene synthase [Micromonospora sp. L5]
          Length = 308

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 87/277 (31%), Gaps = 9/277 (3%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN--PI 71
           +   +          R      YLA  L P   R  +  LY F      + D   +  P 
Sbjct: 2   DTDLTAAYDRCRELHRRHGRTYYLATRLLPAWKRRHVHALYGFTRYADEIVDRTEDLPPA 61

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
            R  RL+ W D F +   G   +   P    +L  +  +DL    F   + +   D    
Sbjct: 62  ERAARLREWSDRFVAGLHGASVD--DPLLPAVLHTIAVFDLDRDDFASFLRSMAMDLTVM 119

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
           S         Y    ++ +  +   IL S   +A+    +  G A  +   I  +     
Sbjct: 120 SYPTYDDLLDYMEGSAAVIGTMMLPILGSSDPAAAREPARQLGFAFQLTNFIRDVAEDLD 179

Query: 192 RGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           RG+ Y P + +    L R+  L    +G+ + RI   I+        +   A   +  + 
Sbjct: 180 RGRTYLPDEDMAKFDLTRDDLLAAKAAGRTTPRIRELIEYEVTRAQAHYVAAAPGIPLLD 239

Query: 248 PDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           P          ++   +L       + +        Q
Sbjct: 240 PASQACMRTAYALYGGILDEVAAQDYDVFVRRALVPQ 276


>gi|314935540|ref|ZP_07842892.1| dehydrosqualene synthase [Staphylococcus hominis subsp. hominis
           C80]
 gi|313656105|gb|EFS19845.1| dehydrosqualene synthase [Staphylococcus hominis subsp. hominis
           C80]
          Length = 288

 Score =  188 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 83/274 (30%), Gaps = 2/274 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
                    +  + ++D       A  L P   R ++  +Y     +    D  ++    
Sbjct: 1   MSFVEESYQYCHKIMKDYSKSFSFAFDLLPERQRRAIWAIYSVCRIIDDSIDIHQDVDYL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
               Q  K I   S      ES            + + +      ++I+    D      
Sbjct: 61  YKIKQDVKRIERQSDIQKSFESDQHIMTAFADTAQTFPMNYDALYELIDTVMNDQSFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                   Y + ++  +  L   +L +     +    K  G A  +  ++  +   YH G
Sbjct: 121 DTDDALMEYCYGVAGTVGVLLIPVLSTSPTKETYENGKQLGEALQLTNILRDVGEDYHNG 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y  ++ L   G+  +  ++   S+R     + +A +           +     +    
Sbjct: 181 RVYLSIERLEQCGVSMDDEMNSGPSERYKKLWEYYATIAENDYEAVLNHLDVYDKEARFI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
             +   + +S+L   +   +   S     ++  +
Sbjct: 241 IELAARVYKSILDETRKANY-TFSQRVYVSKWKK 273


>gi|319763669|ref|YP_004127606.1| squalene synthase hpnd [Alicycliphilus denitrificans BC]
 gi|330824066|ref|YP_004387369.1| squalene synthase HpnD [Alicycliphilus denitrificans K601]
 gi|317118230|gb|ADV00719.1| squalene synthase HpnD [Alicycliphilus denitrificans BC]
 gi|329309438|gb|AEB83853.1| squalene synthase HpnD [Alicycliphilus denitrificans K601]
          Length = 279

 Score =  188 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 91/278 (32%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V +         Y A L  P   R +++  Y F  E+  V D   +      +L WW+
Sbjct: 5   QYVQQKAAASGSSFYYAFLFLPRQRRAAITAFYAFCREVDDVVDDVSDASVAQAKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                +          P    L+  V  Y +       +IE    D       D      
Sbjct: 65  GEVAQAFA---GRPSHPVMQALMPHVPAYGIEQGQLQAVIEGCQMDLEQTRYLDFAGLAR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I        +       G+A  +  +I  +     RG++Y P+  
Sbjct: 122 YCHLVAGVVGEVAAHIFGQTDARTTA-YAHKLGLAFQLTNIIRDVGEDAMRGRIYLPISE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +        + SDR +  ++  AE   +   +A   +         P  +  SI 
Sbjct: 181 LQQFDVKAHEITRREYSDRFTALMRFQAERAHRLYDEALALLPDADRRAQKPGLMMASIY 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+  +  GF+++    +   L + W         R
Sbjct: 241 RTLLREIEADGFQVLHQRTSLTPLRKFWLAWKMQALGR 278


>gi|228475621|ref|ZP_04060339.1| dehydrosqualene synthase [Staphylococcus hominis SK119]
 gi|228270403|gb|EEK11838.1| dehydrosqualene synthase [Staphylococcus hominis SK119]
          Length = 288

 Score =  188 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 83/274 (30%), Gaps = 2/274 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
                    +  + ++D       A  L P   R ++  +Y     +    D  ++    
Sbjct: 1   MSFVEESYQYCHKIMKDYSKSFSFAFDLLPERQRRAIWAIYSVCRIIDDSIDIHQDVDYL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
               Q  + I   S      ES            + + +      ++I+    D      
Sbjct: 61  YKIKQDVQRIEHQSDIQKSFESDQHIMTAFADTAQTFPMNYYALYELIDTVMNDQSFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                   Y + ++  +  L   +L +     +    K  G A  +  ++  +   YH G
Sbjct: 121 DTDDALMEYCYGVAGTVGVLLIPVLSTSPTKETYENGKQLGEALQLTNILRDVGEDYHNG 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y  ++ L   G+  +  ++   S++     + +A +           +     +    
Sbjct: 181 RVYLSIERLEQCGVSMDDEMNSGPSEKYKKLWEYYATIAENDYEAVLNHLDVYDKEARFI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
             +   + +S+L   +   +   S     ++  +
Sbjct: 241 IELAARVYKSILDETRKANY-TFSQRVYVSKWKK 273


>gi|145347172|ref|XP_001418049.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578277|gb|ABO96342.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 273

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 92/269 (34%), Gaps = 17/269 (6%)

Query: 42  SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSV 101
             P  + ++  +Y +      + D           L  W++  E        + +     
Sbjct: 1   MTPEKQRAIWAIYVWCRRTDELVDGPNASHITPEALDRWEERLEGIFD---GKPVDMIDA 57

Query: 102 ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE 161
            L   + ++ +  Q F DMI+    D          +   Y +R++  +  ++  I+  +
Sbjct: 58  TLCDTLSRFPVDIQPFRDMIDGMRMDLVKPRYETFDELYEYCYRVAGTVGLMSMPIMGCD 117

Query: 162 RY-----SASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLS- 214
                      +     G+A  +  ++  +      R ++Y P++ L   G+  +  L  
Sbjct: 118 ENFQGDVKKVYKAALALGLANQLTNILRDVGEDAQTRNRIYVPIEDLNRFGITEQEVLRG 177

Query: 215 ------GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHA 267
                 G+  DR    +K   E   +    A + +  +  D   P +  + +  ++L   
Sbjct: 178 MFSPSTGKVDDRWVAFMKFQIERARQVFKDAEDGVNCLHKDARWPVWSALDVYRNILDAI 237

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           + +G+   +      ++ +   +  S +K
Sbjct: 238 EANGYNNFNQRAYVPKVEKFLMLPQSYLK 266


>gi|194214980|ref|XP_001491859.2| PREDICTED: similar to CG15738 CG15738-PA [Equus caballus]
          Length = 292

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/270 (25%), Positives = 114/270 (42%), Gaps = 3/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             DY+ YL  LL P   R S   L  F+ EL +V+D         MR+Q+WK   +    
Sbjct: 26  KRDYESYLCSLLLPAESRSSAFALRAFNVELAQVKDLVSEKTIGLMRMQFWKKTVDDIYC 85

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
                   P ++EL   V++++L  ++ + +++    +  + +  + ++ E YA    S 
Sbjct: 86  DNP--PHQPVAIELWKAVKKHNLTKRWLMKIVDEREKNLDDKAYRNIQELESYAENTQSS 143

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           L++L   IL  +   A      + G AQ I   +  +P H  R +++ P+DI    G+ +
Sbjct: 144 LLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRAMPYHGSRRRVFLPMDICMLHGVSQ 202

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQN 269
           E FL       +   I   A     +L  AR   + +    FPAF+     E  LK  Q 
Sbjct: 203 EDFLRKNRDKNVRDVIYDIASQAHLHLKHARSFHKSVPVKAFPAFLQTVALEDYLKKIQQ 262

Query: 270 HGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             F I   S      + P  +   S +KR+
Sbjct: 263 VDFDIFHPSLQQKNTLLPLSLYIRSWRKRY 292


>gi|66911947|gb|AAH97249.1| LOC569692 protein [Danio rerio]
          Length = 344

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 67/296 (22%), Positives = 119/296 (40%), Gaps = 9/296 (3%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +T +TR+       +  + +  +R  DY+ +L  LL P   R S   L  F+ EL ++
Sbjct: 58  RAVTNSTRQH------NEQYCIDIVRKKDYEGFLCSLLLPEAARRSALALRAFNVELAQI 111

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
           +D+  +     MR+Q+WK   E   +        P S EL   VR++ L  ++ L ++  
Sbjct: 112 KDSVSHKTIGLMRMQFWKSAVEDIYRDDP--PAQPVSAELWRAVRKHTLTRRWMLRIVSE 169

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
              D  + +  + +  E Y     S L++L    L  +   A      + G AQ I   +
Sbjct: 170 REKDMEDRAYRNLQDLEAYGENTQSSLLYLLLETLGVKNVHA-DHAASHIGKAQGILTCL 228

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
              P +  R ++Y P+DI    G  +E F+ G     +   +   A     +L  AR   
Sbjct: 229 RATPFNSSRRKVYLPMDICMLHGASQEDFIRGSRDQNVRDVVYDIASQAHVHLQHARSFA 288

Query: 244 RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +     PAF+   + E  L+  +   F +   S        P  +   S +K +
Sbjct: 289 ESVPHSAMPAFLQTVVLEDYLQRVRKVDFDVFHPSLQKRNPTLPLQLYLRSWRKIY 344


>gi|313668280|ref|YP_004048564.1| poly-isoprenyl transferase [Neisseria lactamica ST-640]
 gi|313005742|emb|CBN87196.1| putative poly-isoprenyl transferase [Neisseria lactamica 020-06]
          Length = 290

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 86/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +    G +     P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVFGGTM--PEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L+     G+A  +  +I  +      G++Y P++
Sbjct: 122 LYCRRVAGVVGCLIARILGFSDGKT-LQYADKMGLALQLTNIIRDVGEDARNGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPAGVILQCSPTGNFAELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|109390041|gb|ABG29739.1| phytoene synthase 1-2 [Triticum turgidum subsp. durum]
 gi|109390043|gb|ABG29740.1| phytoene synthase 1-2 [Triticum turgidum subsp. durum]
          Length = 249

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 9/252 (3%)

Query: 33  YDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLI 92
              YL  LL     + ++  +Y +      + D           L  W+   E       
Sbjct: 1   KTFYLGTLLMTEERQRAIWAIYVWCRRTDELVDGPNASHITPQALDRWERRLEDLFA--- 57

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
                     L   + ++ +  Q F DMI+    D       +  +   Y + ++  +  
Sbjct: 58  GRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNFDELYMYCYYVAGTVGL 117

Query: 153 LATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           ++  ++                    G+A  +  ++  +     RG++Y P D L   GL
Sbjct: 118 MSVPVMGIAPDSKATAETVYGAALALGLANQLTNILRDVGEDARRGRIYLPQDELAEAGL 177

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKH 266
             E    G  +D+    +K   +    +  +A   +  +  +   P +  + +   +L  
Sbjct: 178 SDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESRWPVWASLLLYRQILDE 237

Query: 267 AQNHGFKIVSHS 278
            + + +   +  
Sbjct: 238 IEANDYNNFTKR 249


>gi|217978990|ref|YP_002363137.1| Squalene/phytoene synthase [Methylocella silvestris BL2]
 gi|217504366|gb|ACK51775.1| Squalene/phytoene synthase [Methylocella silvestris BL2]
          Length = 287

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 2/278 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
              D  +    +R  D DR+LA L  P   R     LY F  E+ RVR+    P+  ++R
Sbjct: 8   LDADYAYCETIVRRDDPDRWLASLFLPEGKRRYAHALYAFSLEIARVREVVSEPMLGEIR 67

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
            QWW++  E   +  +    +P +  +  ++ ++DLP+++ L +I+A  FD ++D +   
Sbjct: 68  FQWWREALEQPDREDV--RANPVAAAVTDVLVRFDLPSEHLLQLIDARQFDLFDDPMQSV 125

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            + E YA   SS L  L  MIL+ E  S+      + G A  +  L+   P H  RGQ Y
Sbjct: 126 DELEAYARATSSNLFCLTPMILEPETPSSGFGAASHGGTAYALTGLLRAFPWHAARGQCY 185

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PLDIL   GL+R   +SG+ S  +  A++ F  L   +L      +  +     PAF+P
Sbjct: 186 VPLDILRRHGLERADAVSGRASPALLAALEEFRALARSHLEIFLTRIEGLPDLARPAFLP 245

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           + + E  L+  +   +     +    Q  R W +  ++
Sbjct: 246 ICLCEPYLRLMEGKCYDPFKTNVVLPQWRRQWALWRAA 283


>gi|74317715|ref|YP_315455.1| farnesyl-diphosphate farnesyltransferase [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057210|gb|AAZ97650.1| putative terpenoid synthase [Thiobacillus denitrificans ATCC 25259]
          Length = 281

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 96/281 (34%), Gaps = 7/281 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +            Y + +  P   R +++  Y    EL  V D        +++L 
Sbjct: 2   DAHRYCQERAAASGSSFYYSFVFLPTEVRRAITAFYALCRELDDVVDECHERQLAELKLA 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW++            +  P +  L    R   +     L++++    D  +    D + 
Sbjct: 62  WWREEIGRFAA---GAATHPATRALADTARGASVQPALLLEIVDGMAMDLEHARYADFRA 118

Query: 139 FEHYAFRISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            + Y  R +S +  +A  I      E      R     G+A  +  +I  +     RG++
Sbjct: 119 LKLYCHRAASVVGEIAAGIFEGARGEHDREVRRYAHELGLAFQLTNIIRDVGEDARRGRI 178

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAF 254
           Y PLD +   G+     L G+++      ++   E  + +  +A   +         P  
Sbjct: 179 YLPLDEMARFGVAEADVLEGRDTPAFRALMQFQYERAVAHYERALATLPSAARRAQRPGL 238

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +  +I  S+L   +  GF ++        L + W    + +
Sbjct: 239 VMAAIYRSLLDEIRRDGFPVLRARIALTPLRKLWLASRTWL 279


>gi|255261384|ref|ZP_05340726.1| phytoene synthase [Thalassiobium sp. R2A62]
 gi|255103719|gb|EET46393.1| phytoene synthase [Thalassiobium sp. R2A62]
          Length = 347

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 94/283 (33%), Gaps = 8/283 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           I   D       +R      + A  L P   R     LY F        D   N     +
Sbjct: 2   IDPNDLEHCRDVIRTGSLSFHAASKLLPASVRDPALALYAFCRLADDEVDEGDNKARAVI 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            LQ   +  E    G      +P      ++V  ++LP      ++E   +D+       
Sbjct: 62  DLQ---ERLELVYAGKP--RNAPEDRAFAAVVADFELPRALPEALLEGLAWDAIEQQYNS 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 Y  R++S +  +  +++      A  R     G+A  +  +   +      G++
Sbjct: 117 LADLRGYCARVASAVGAMMCVLMRVRDADALARACD-LGVAMQLTNIARDVGEDARMGRI 175

Query: 196 YFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           Y PLD L   G+D+ +FL   Q +  I   +K           K+   +  +        
Sbjct: 176 YLPLDWLNEAGVDQGAFLRNPQATPEIKQMVKTMLADARALYVKSEAGIGSLPASARTGI 235

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                I  ++      +G+  +++    ++  +   +  S+++
Sbjct: 236 FAARYIYSAIGSAVARNGYDSITYRGRSSKAQKVALIGKSALR 278


>gi|320105013|ref|YP_004180604.1| Phytoene synthase [Isosphaera pallida ATCC 43644]
 gi|319752295|gb|ADV64055.1| Phytoene synthase [Isosphaera pallida ATCC 43644]
          Length = 331

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 94/288 (32%), Gaps = 8/288 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               F  R +R    +   A  L P   R  ++ +Y F      + D       R   L 
Sbjct: 40  ASHEFCSRVVRCEARNFAYAFRLLPADRRRGMNAIYAFFRHTDDLVDQPGPLERRRAALN 99

Query: 79  WWKDIFESSTKGLIAESIS----PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
            W+   + +        I     P    L+  VR++ +P ++  ++I+    D  +    
Sbjct: 100 AWRIQLDHALNHDPPPPIHGSSWPGLAALVETVRRHAIPPRHLHEVIDGVAMDLEHHGFE 159

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRV-IKYAGIAQFIGQLICQLPIHYHRG 193
           D +    Y + ++S +      +   +          +  GIA  +  ++  +     +G
Sbjct: 160 DFEALRTYCYHVASAVGLTCLHLWGFDNRDGRAVRLAEQCGIALQLTNILRDVQEDARQG 219

Query: 194 QLYFPLDILGAVGLDRESF--LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           ++Y P   L   G+D  S   ++     ++   ++  A+       +A      I P   
Sbjct: 220 RIYLPRAELARFGVDPASLAEMTHPAPRQLRALLEFQAQRAETLYREAAPLANLINPVGR 279

Query: 252 PAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           P    +  I  ++L+      + I        +  +      +    R
Sbjct: 280 PVLAAIVGIYHALLREIVRRDYNIWGGRVRVARWRKLAIAGRAWWTGR 327


>gi|241767202|ref|ZP_04764952.1| squalene synthase HpnD [Acidovorax delafieldii 2AN]
 gi|241362161|gb|EER58242.1| squalene synthase HpnD [Acidovorax delafieldii 2AN]
          Length = 279

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 95/279 (34%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +V +         Y A L  P   R +++  Y F  E+  V D   +P     +L WW
Sbjct: 4   QQYVQQKAVASGSSFYYAFLFLPAPRRAAITAFYAFCREVDDVVDEVTDPGVARTKLAWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +     +      +   P  + L+    ++ +  ++   +I+    D       D    +
Sbjct: 64  QAEVAKAYA---GQPTHPVMLALMPHTAEFGIEQRHLQAVIDGCHMDLEQTRYLDFAGLK 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y   ++  +  +A  I        +       G+A  +  +I  +      G++Y P+ 
Sbjct: 121 GYCHLVAGIVGEVAARIFGQTDPRTTE-YAHTLGLAFQLTNIIRDVGEDAMLGRIYLPVS 179

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSI 259
            L    +     L  Q SDR +  ++  AE       +A   +         P  +  SI
Sbjct: 180 ELQQFDVKAHEILKRQYSDRFTALMRFQAERAHSLYDEAFALLPDADRRAQKPGLMMASI 239

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             ++L+  ++  F+++        L + W         R
Sbjct: 240 YRTLLREIEHANFQVLHQRIRLTPLRKFWLAWKVQALGR 278


>gi|15677007|ref|NP_274159.1| putative phytoene synthase [Neisseria meningitidis MC58]
 gi|15677043|ref|NP_274195.1| putative phytoene synthase [Neisseria meningitidis MC58]
 gi|7226367|gb|AAF41518.1| putative phytoene synthase [Neisseria meningitidis MC58]
 gi|7226405|gb|AAF41553.1| putative phytoene synthase [Neisseria meningitidis MC58]
 gi|316985021|gb|EFV63974.1| squalene synthase HpnD [Neisseria meningitidis H44/76]
 gi|325140314|gb|EGC62837.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           CU385]
 gi|325200192|gb|ADY95647.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           H44/76]
          Length = 290

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 84/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCHRVAGVVGCLIARILGFSDDQT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
              +L      G   ++ +        +    L + +  
Sbjct: 241 YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|330684459|gb|EGG96181.1| dehydrosqualene synthase [Staphylococcus epidermidis VCU121]
          Length = 287

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 104/280 (37%), Gaps = 11/280 (3%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
               +    +  + ++        A  L P   R ++  +Y     +    D  +NP   
Sbjct: 1   MTTVNESYKYCHQIMKKHSKSFSYAFDLLPESERRAVWAVYAVCRIIDDSIDEEQNPQ-- 58

Query: 74  DMRLQWWKDIFESSTKGLIA-----ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
             +LQ  K+  +      +      +S     +      + Y +  Q F ++IE+ F D 
Sbjct: 59  --KLQAIKEDIQLIESQQVDSTVQFKSNQRIMLAFYDTSQNYKMEYQSFYNLIESVFEDE 116

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++   Y + ++  +  + + IL  +    +  V +  G A  +  ++  +  
Sbjct: 117 HFEMFVKDEELMRYCYGVAGTVGEVLSPILTEQPSHETYEVARELGEALQLTNILRDVGE 176

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            + +G++YF  ++L    ++ E     Q +D      + +A++  K    A + +    P
Sbjct: 177 DFEKGRIYFSREMLNQYDVNIEDVYQQQLTDNYINLWEHYAQIAEKDYQFALDHLNVFKP 236

Query: 249 DVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
           +      +   I + ++   + HG+  +      ++L + 
Sbjct: 237 EARLIIELAARIYKGIIDEVRVHGY-PLHRRVYVSRLDKL 275


>gi|223042326|ref|ZP_03612375.1| dehydrosqualene synthase (Diapophytoene synthase)
           (4,4'-diapophytoene synthase) (DAP synthase)
           [Staphylococcus capitis SK14]
 gi|222443989|gb|EEE50085.1| dehydrosqualene synthase (Diapophytoene synthase)
           (4,4'-diapophytoene synthase) (DAP synthase)
           [Staphylococcus capitis SK14]
          Length = 287

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 101/288 (35%), Gaps = 13/288 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
            ++  +  + +++       A    P   R ++  +Y     +    D   +P      L
Sbjct: 5   EKNFKYCHQIMKEHSKSFSYAFDYLPENERKAVWAIYAVCRIIDDSIDVYEDPQI----L 60

Query: 78  QWWKDIFESSTKGLIAE-----SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           +   D   +  K    E     S       L ++ + + +  Q F ++I+  + D   + 
Sbjct: 61  KNIHDDIITIEKNHDVENYEFKSNQMIMEALYTVSQNFTIEYQSFYNLIQTVYEDQDFEM 120

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                +  +Y + ++  +  + T +L  +    + R+ +  G A  I  ++  +   +  
Sbjct: 121 FETDDELLNYCYGVAGTVGEVLTPVLAEQPNEETYRIARKLGEALQITNILRDVGEDFEN 180

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            ++YF    L    +  E+  +   S +     +  A+L  +    A   +     +  P
Sbjct: 181 DRIYFSKSSLSRFDVSIENDFNNGVSQQYVDLWEHHAKLAQEDYDIALSNLGVFNKEAQP 240

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              +   I   +L   +   +  +      ++L +   M  + IKK++
Sbjct: 241 IIELASIIYRGILDEVRKASY-TLHRRVYVSKLDKV-KMYKT-IKKKY 285


>gi|121634870|ref|YP_975115.1| putative poly-isoprenyl transferase [Neisseria meningitidis FAM18]
 gi|120866576|emb|CAM10327.1| putative poly-isoprenyl transferase [Neisseria meningitidis FAM18]
 gi|325132256|gb|EGC54950.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M6190]
 gi|325138180|gb|EGC60751.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           ES14902]
 gi|325142389|gb|EGC64798.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           961-5945]
 gi|325198313|gb|ADY93769.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           G2136]
          Length = 290

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 84/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y   ++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCHCVAGVVGCLIARILGFSDDQT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|294676237|ref|YP_003576852.1| phytoene synthase [Rhodobacter capsulatus SB 1003]
 gi|117497|sp|P17056|CRTB_RHOCA RecName: Full=Phytoene synthase
 gi|45999|emb|CAA36534.1| unnamed protein product [Rhodobacter capsulatus SB 1003]
 gi|46124|emb|CAA77541.1| 339 aa (37 kd) prephytoene pyrophosphate synthase [Rhodobacter
           capsulatus]
 gi|294475057|gb|ADE84445.1| phytoene synthase [Rhodobacter capsulatus SB 1003]
 gi|227040|prf||1613414C crtB gene
          Length = 339

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 100/285 (35%), Gaps = 5/285 (1%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           I   D       +R   Y  + A  + P   R     LY F        D    P  +  
Sbjct: 2   IAEADMEVCRELIRTGSYSFHAASRVLPARVRDPALALYAFCRVADDEVDEVGAPRDKAA 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            +    D  E    G      +P      ++V ++++P +    ++E   +D+       
Sbjct: 62  AVLKLGDRLEDIYAGRP--RNAPSDRAFAAVVEEFEMPRELPEALLEGFAWDAEGRWYHT 119

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
               + Y+ R+++ +  +  +++      A  R     G+A  +  +   +      G+L
Sbjct: 120 LSDVQAYSARVAAAVGAMMCVLMRVRNPDALARACD-LGLAMQMSNIARDVGEDARAGRL 178

Query: 196 YFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           + P D +   G+D ++FL+  Q +  I    +       +  ++A   +R +  D  P  
Sbjct: 179 FLPTDWMVEEGIDPQAFLADPQPTKGIRRVTERLLNRADRLYWRAATGVRLLPFDCRPGI 238

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +    I  ++        +  ++      +  + W + +S++   
Sbjct: 239 MAAGKIYAAIGAEVAKAKYDNITRRAHTTKGRKLWLVANSAMSAT 283


>gi|304387566|ref|ZP_07369755.1| squalene synthase HpnD [Neisseria meningitidis ATCC 13091]
 gi|304338453|gb|EFM04574.1| squalene synthase HpnD [Neisseria meningitidis ATCC 13091]
          Length = 290

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 84/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCHRVAGVVGCLIARILGFSDDQT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYCEAVSLLPAADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
              +L      G   ++ +        +    L + +  
Sbjct: 241 YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|296314271|ref|ZP_06864212.1| squalene synthase HpnD [Neisseria polysaccharea ATCC 43768]
 gi|296839067|gb|EFH23005.1| squalene synthase HpnD [Neisseria polysaccharea ATCC 43768]
          Length = 290

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 86/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFHFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +            P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGEMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVRARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCHRVAGVVGCLIARILGFSDGKT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +D  +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPASVILQCSPTDNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +   +L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIVLKTWLFG 279


>gi|120610143|ref|YP_969821.1| farnesyl-diphosphate farnesyltransferase [Acidovorax citrulli
           AAC00-1]
 gi|120588607|gb|ABM32047.1| farnesyl-diphosphate farnesyltransferase [Acidovorax citrulli
           AAC00-1]
          Length = 286

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 95/286 (33%), Gaps = 4/286 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +  F     +V +         Y A L  PP  R +++  Y F  E+  V D   +    
Sbjct: 3   QSSFMTPEQYVQQKAAASGSSFYYAFLFLPPARRAAITAFYAFCREVDDVVDEVSDAGVA 62

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
             +L WW+     S  G       P    L+     Y +  ++   +IE    D      
Sbjct: 63  RTKLAWWQAEVARSFAGQP--PAHPVMQALMPHTGMYGIEERHLQAVIEGCQMDLEQTRY 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D +    Y   ++  +  +A  I        ++      G+A  +  +I  +      G
Sbjct: 121 LDFQGLSRYCHLVAGIVGEVAARI-FGPSDERTVEYAHTLGLAFQLTNIIRDVGEDAMMG 179

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-P 252
           ++Y P+  L    +     L  Q SDR +  ++  AE       KA   +         P
Sbjct: 180 RIYLPVAELQQFDVKAHEILKRQYSDRFTALMRFQAERAHGLYDKALSLLPGDQRRAQKP 239

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             +  SI  ++L+  +   F+++        L + W         R
Sbjct: 240 GLMMASIYRTLLREIERDQFQVLHQRIALTPLRKLWLAWKMQALGR 285


>gi|298369240|ref|ZP_06980558.1| squalene synthase HpnD [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283243|gb|EFI24730.1| squalene synthase HpnD [Neisseria sp. oral taxon 014 str. F0314]
          Length = 290

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 94/282 (33%), Gaps = 7/282 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +   +            +L+     P   R +++ LY F  EL  V D + NP      L
Sbjct: 10  QPLEYCR-LKAAESKSSFLSGFRFLPQAQREAMTVLYVFCRELDDVADDSSNPAVAQAAL 68

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
            WW+     +    +     P +  L +++  + LP+  F ++I+    D          
Sbjct: 69  NWWRADLAKAFTEQM--PEHPVNQALKTVLHSFALPHGEFSELIDGMQMDLDQARYNSFD 126

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             + Y  R +  +  L   IL   +    L      G+A  +  +I  +     +G++Y 
Sbjct: 127 DLKLYCRRAAGVVGCLIARILGFTQPQT-LEYADKMGLALQLTNIIRDVGEDARKGRIYL 185

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIP 256
           P++ +   G+     +    +   +  +        +   +A   +            I 
Sbjct: 186 PVEDMQRFGVPASVVMRSAPTPEFAALMAFQIGRARETYRQAVSLLPAADKKSQKVGLIM 245

Query: 257 VSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
            +I  ++L   +  G   ++++        +    L + +  
Sbjct: 246 AAIYYALLNEIERDGAENVLTYKIAIPSPRKKRIALKTWLFG 287


>gi|47498515|gb|AAT28184.1| phytoene synthase [Dunaliella salina]
          Length = 420

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 96/297 (32%), Gaps = 22/297 (7%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDM 75
                       ++     YL   L  P+    +  +Y +      + D    + IT   
Sbjct: 121 LEAAYERCGAVCKEYAKTFYLGTQLMTPVQARCIWAIYVWCRRTDELVDGPNASKITPQQ 180

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++      +             L   + ++ L  Q F DMIE    D +      
Sbjct: 181 ALDRWEERLNGVFQ---GRPYDVLDAALTDTISKFPLEVQPFRDMIEGMRMDLFKSRYQT 237

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y +R++  +  +   ++  +           R     G A  +  ++  +    
Sbjct: 238 FDELYEYCYRVAGTVGLMTVPVMGIDPNYKGPLDKVYRAALALGTANQLTNILRDVGEDI 297

Query: 191 H-RGQLYFPLDILG---------AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
             R ++Y PLD L            G+ + S   G+  +R    +K   +   +Y  +A 
Sbjct: 298 RERDRIYLPLDELRGVWHLGRQVRAGIHKPS--QGKVDERWRKFMKFQIQRAREYFQEAE 355

Query: 241 EEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           + + Y+      P +  + +   +L   + + +   S     ++  +   +  + ++
Sbjct: 356 DGVDYLDVKARWPVWSALILYRQILDVIEKNDYDNFSMRAYVSKSKKLASLPLALLR 412


>gi|314934615|ref|ZP_07841974.1| dehydrosqualene synthase [Staphylococcus caprae C87]
 gi|313652545|gb|EFS16308.1| dehydrosqualene synthase [Staphylococcus caprae C87]
          Length = 287

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 101/288 (35%), Gaps = 13/288 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
            ++  +  + +++       A    P   R ++  +Y     +    D   NP      L
Sbjct: 5   EKNFKYCHQIMKEHSKSFSYAFDYLPENERKAVWAIYAVCRIIDDSIDVHENPQI----L 60

Query: 78  QWWKDIFESSTKGLIAE-----SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           +   D   +  K    E     S       L ++ + + +  Q F ++I+  + D   + 
Sbjct: 61  KNIHDDIITIEKNHDVENYEFKSNQMIMEALYTVSQNFTIEYQSFYNLIQTVYEDQDFEM 120

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                +  +Y + ++  +  + T +L  +    + R+ +  G A  I  ++  +   +  
Sbjct: 121 FETDDELLNYCYGVAGTVGEVLTPVLAEQPNEETYRIARKLGEALQITNILRDVGEDFEN 180

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            ++YF    L    +  E+  +   S +     +  A+L  +    A   +     +  P
Sbjct: 181 DRIYFSKSSLSRFDVSIENDFNNGVSQQYIDLWEHHAKLAQEDYDIALSNLGVFNKEAQP 240

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              +   I   +L   +   +  +      ++L +   M  + IKK++
Sbjct: 241 IIELASIIYRGILDEVRKASY-TLHRRVYVSKLDKV-KMYKT-IKKKY 285


>gi|189530043|ref|XP_698183.2| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial [Danio
           rerio]
          Length = 352

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/296 (22%), Positives = 119/296 (40%), Gaps = 9/296 (3%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +T +TR+       +  + +  +R  DY+ +L  LL P   R S   L  F+ EL ++
Sbjct: 66  RAVTNSTRQH------NEQYCIDIVRKKDYEGFLCSLLLPEAARRSALALRAFNVELAQI 119

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
           +D+  +     MR+Q+WK   E   +        P S EL   VR++ L  ++ L ++  
Sbjct: 120 KDSVSHKTIGLMRMQFWKSAVEDIYRDDP--PAQPVSAELWRAVRKHTLTRRWMLRIVSE 177

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
              D  + +  + +  E Y     S L++L    L  +   A      + G AQ I   +
Sbjct: 178 REKDMEDRAYRNLQDLEAYGENTQSSLLYLLLETLGVKNVHA-DHAASHIGKAQGILTCL 236

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
              P +  R ++Y P+DI    G  +E F+ G     +   +   A     +L  AR   
Sbjct: 237 RATPFNSSRRKVYLPMDICMLHGASQEDFIRGSRDQNVRDVVYDIASQAHVHLQHARSFA 296

Query: 244 RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +     PAF+   + E  L+  +   F +   S        P  +   S +K +
Sbjct: 297 ESVPHSAMPAFLQTVVLEDYLQRVRKVDFDVFHPSLQKRNPTLPLQLYLRSWRKIY 352


>gi|242372212|ref|ZP_04817786.1| possible Phytoene synthase [Staphylococcus epidermidis M23864:W1]
 gi|242350151|gb|EES41752.1| possible Phytoene synthase [Staphylococcus epidermidis M23864:W1]
          Length = 287

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 97/292 (33%), Gaps = 13/292 (4%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
                 +  +  + +++       A    P   R ++  +Y     +    D   NP   
Sbjct: 1   MTTNEENFKYCHQIMKEHSKSFSYAFDFLPEQERQAVWVIYAVCRIIDDSIDVHENPQI- 59

Query: 74  DMRLQWWKDIFESSTK-----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
              L+   +                +S     V L  + + Y +  Q F ++I++ + D 
Sbjct: 60  ---LKDIHEDISYIENTSDISHHEFKSNQSIMVALYVVSQHYTIEYQSFYNLIQSVYEDQ 116

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
             +     +   +Y + ++  +  + T +L       +    +  G A  I  ++  +  
Sbjct: 117 NFEMFETDEALLNYCYGVAGTVGEVLTPVLAQSPNKETYATARKLGEALQITNILRDVGE 176

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            +  G++YF    L    +  E+  + + S++     + FA +       A   +     
Sbjct: 177 DFENGRIYFSESSLARFDVSIENEFNHRISNQYIDLWEYFAAIAEDDYEIALSNIDTFNK 236

Query: 249 DVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +  P   +   I  ++L   +   +  +      ++L +   +    IK ++
Sbjct: 237 EAQPIIELAAVIYRAILDEVRKASY-TLHRRVYVSKLNK-AKLYRK-IKNKY 285


>gi|91083739|ref|XP_971029.1| PREDICTED: similar to CG15738 CG15738-PA [Tribolium castaneum]
 gi|270006800|gb|EFA03248.1| hypothetical protein TcasGA2_TC013182 [Tribolium castaneum]
          Length = 303

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 112/280 (40%), Gaps = 2/280 (0%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
           + + +  ++  DY+ +L+ LL     R     +  F+ E+ RV +      T  MR+Q+W
Sbjct: 25  ANYCMNLVKSYDYENFLSTLLLKGKSRSCAFAVRSFNVEVARVAEQVSTKETGLMRMQFW 84

Query: 81  KDIFESSTK-GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           +D  E             P ++EL + + +  L  ++  ++I +       ++    +  
Sbjct: 85  EDALEKCFSGNCDKVPRHPVAIELFNAISRNKLSKRHLKNLILSRKEHFNLNTFHKLEDM 144

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E Y+ R  S + +L     D    +A      + G AQ I Q +  +P   +   +  P 
Sbjct: 145 ETYSERSVSSVYYLILEGCDIRNINA-DHAASHLGKAQGIVQNLRCIPQCKNLNFVPLPQ 203

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
            IL    + +E  L  ++S  +S  +   A    ++L KAR     + P+     +P   
Sbjct: 204 SILVKNNVSQEELLRHKSSQPLSDCVYEVATRAHQHLMKARSLQEKVPPEGRSVLLPAVA 263

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           T + LK  +N  + I             + M  S+ K ++
Sbjct: 264 TFAFLKRLENVNYDIFHPQLKARPWNLLFKMWFSNFKNKY 303


>gi|110668758|ref|YP_658569.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
           synthase) [Haloquadratum walsbyi DSM 16790]
 gi|109626505|emb|CAJ52967.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
           synthase) [Haloquadratum walsbyi DSM 16790]
          Length = 346

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 92/275 (33%), Gaps = 9/275 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--TARNPITRDMRLQWWKD 82
               +      +LA  + P   R +   LY F      V D   A  P  +  RL   + 
Sbjct: 11  KAIQKRTGKTFHLATRVLPERVRHATYVLYAFFRVADEVVDATDAAPPPQQRERLAELRR 70

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                       +  P       +   Y++PN+     I+A   D   D        E Y
Sbjct: 71  Q-----ALGKESTDDPVLSAFAELCESYEIPNEDVNVFIDAMLADVDTDQYETYDDLETY 125

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDI 201
               ++ +  + T I+D+E    +L      G A  +   +  +      R ++Y P + 
Sbjct: 126 MDGSAAAVGRMMTAIMDTENAETALPHATALGEAFQMSNFLRDVGEDVKERDRVYLPQET 185

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +     L+ +  + +   I+   +       +  + ++Y+  D      +   + 
Sbjct: 186 LRQYDVSTAQILNLEFDENVRAVIQHEQQRTEALYREGVKGIQYLPEDCQLAVLLAAVLY 245

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
               +  +   + ++S + + +   + W +L + +
Sbjct: 246 ADHHRAIERVDYDVLSRTPSLSTPRKLWLLLKTRM 280


>gi|194476785|ref|YP_002048964.1| phytoene synthase [Paulinella chromatophora]
 gi|171191792|gb|ACB42754.1| phytoene synthase [Paulinella chromatophora]
          Length = 311

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 102/297 (34%), Gaps = 17/297 (5%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           E                      YL  LL PP+ R ++  +Y +      + D+ +    
Sbjct: 13  ELPSLESAYEACRLETAQWAKTFYLGTLLMPPVKRRAIWAIYVWCRRTDELMDSPQAQGL 72

Query: 73  RDM----RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                  RL  W++       G+I +S+     +    + ++    Q +LDMIE    D 
Sbjct: 73  PITQLSDRLDRWEERTRDLFDGVIVDSLDLVMAD---TIERFPQELQPYLDMIEGQRMDL 129

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---------YAGIAQFI 179
                      E Y +R++  +  +   ++  +    S                GIA  +
Sbjct: 130 QRHRYNSFDDLELYCYRVAGTVGLMTQHVMGLDPAYTSAPWSYRPNTSEAAIALGIANQL 189

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
             ++  +     RG++Y P + L       +  ++G+ +D     +    +   ++  ++
Sbjct: 190 TNILRDVGEDRGRGRIYLPQEDLARFNYTEDDLMAGRLNDNWRELMAFQLQRAREWFARS 249

Query: 240 REEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              +R++  D   P +  + +   +L   ++  + +  +     +  +   +  S +
Sbjct: 250 ESGVRWLAADARWPVWASLRLYRGILTAIESIDYDVFRNRAFVPRTGKLIDLPWSYL 306


>gi|224002110|ref|XP_002290727.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974149|gb|EED92479.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 543

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 91/306 (29%), Gaps = 16/306 (5%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F  +   +  ++ SR                YL   + P     ++  +Y +      + 
Sbjct: 188 FTNQEKIRFNRLLSRAYEESGIVTSAFAKTFYLGTQVLPEPSMKAIWAIYVWCRRTDEIV 247

Query: 65  DTA----RNPITR-DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDL-PNQYFL 118
           D       +P       L  W+   E        E +    + LL    +Y   P   F 
Sbjct: 248 DAPRPAAHDPNAEMLTDLSEWEIRLERLFDR--GEVVDVLDLPLLDCKVKYPTLPITPFS 305

Query: 119 DMIEAHFFD---SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---Y 172
           DMI     D      +      +   Y +R++  +  ++  +             +    
Sbjct: 306 DMIRGMLMDIPGLGQERYDTWDELHLYCYRVAGTVGLMSMPVFGCAEGYTDEVAKEPALS 365

Query: 173 AGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
            G+A  I  ++  +      R ++Y P   +   G+           +     +K     
Sbjct: 366 LGVAFQITNILRDVGEDAEKRERVYLPQRDMERFGVTERQIFDKVVDENYINLMKFEIAR 425

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              Y  +A   +  + P+   P  + +     +L   + +G+  ++      +  +   +
Sbjct: 426 ARMYYARALRGVPMLRPESRLPVQLSLDAYGKILDKIEENGYDSLTKRAYVGKWEKLAGI 485

Query: 291 LSSSIK 296
            +S  +
Sbjct: 486 PASWYR 491


>gi|109390045|gb|ABG29741.1| phytoene synthase 2-2 [Triticum turgidum subsp. durum]
 gi|109390047|gb|ABG29742.1| phytoene synthase 2-2 [Triticum turgidum subsp. durum]
          Length = 254

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 85/256 (33%), Gaps = 9/256 (3%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
            +     YL   L  P  R ++  +Y +      + D   +       L  W+   E   
Sbjct: 2   EEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKRLEDLF 61

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +         +   L     ++ +  Q F DMIE    D +        +   Y + ++ 
Sbjct: 62  E---GRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYMTFDELYLYCYYVAG 118

Query: 149 RLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            +  +   ++           +        GIA  +  ++  +     RG++Y PLD L 
Sbjct: 119 TVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELA 178

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITES 262
             GL  E    G+ +D+    +K   +    +  +A + + ++      P    + +   
Sbjct: 179 QAGLTEEDIFRGKVTDKWRRFMKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQ 238

Query: 263 VLKHAQNHGFKIVSHS 278
           +L   + + +   +  
Sbjct: 239 ILDAIEANDYNNFTKR 254


>gi|326316312|ref|YP_004233984.1| squalene synthase HpnD [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373148|gb|ADX45417.1| squalene synthase HpnD [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 280

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 93/278 (33%), Gaps = 4/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +V +         Y A L  PP  R +++  Y F  E+  V D   +      +L WW+
Sbjct: 5   QYVQQKAAASGSSFYYAFLFLPPARRAAITAFYAFCREVDDVVDEVSDAGVARTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                S  G       P    L+     Y +  ++   +IE    D       D +    
Sbjct: 65  AEVARSFAGQP--PTHPVMQALMPHTGTYGIEERHLQAVIEGCQMDLEQTRYLDFQGLSR 122

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   ++  +  +A  I        ++      G+A  +  +I  +      G++Y P+  
Sbjct: 123 YCHLVAGIVGEVAARI-FGPSDERTVEYAHTLGLAFQLTNIIRDVGEDAMMGRIYLPVAE 181

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +     L  Q SDR +  ++  A+       KA   +         P  +  SI 
Sbjct: 182 LQQFDVKAHEILKRQYSDRFTALMRFQADRAHGLYDKALSLLPDEQRRAQKPGLMMASIY 241

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++L+  +   F+++        L + W         R
Sbjct: 242 RTLLREIERDQFQVLHQRIALTPLRKLWLAWKMQALGR 279


>gi|325204166|gb|ADY99619.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M01-240355]
          Length = 290

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 84/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVRARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCRRVAGVVGCLIARILGFSDGKT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
              +L      G   ++ +        +    L + +  
Sbjct: 241 YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|226227812|ref|YP_002761918.1| phytoene synthase [Gemmatimonas aurantiaca T-27]
 gi|226091003|dbj|BAH39448.1| phytoene synthase [Gemmatimonas aurantiaca T-27]
          Length = 382

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 92/290 (31%), Gaps = 13/290 (4%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D++   R          LA  L P   R + + LY F      + D      T D+    
Sbjct: 72  DAIECARITALHARTFSLASRLLPREKRRAANALYAFCRLADDLVDQQSARSTTDLHQDL 131

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
            +             + S    EL+ +VR Y++P++   ++IE    D            
Sbjct: 132 LRYRGRLDEALR-GTADSAVLRELMWVVRTYEVPSRPLYELIEGVGRDLTTQRYERWTDV 190

Query: 140 EHYAFRISSRLIHLATMIL--------DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
             Y   ++S +  + T +           +R+S ++   +  G A  +  ++  +     
Sbjct: 191 SRYCEGVASSVGEMCTHVFGVPATGHDGDDRFSVAIGHARTLGRAMQLTNILRDVGEDAR 250

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQN---SDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           RG+ Y P + L   GL  +  L+             ++       +   ++R  +  +  
Sbjct: 251 RGRCYLPSEELAQYGLSVDGVLNDPAVALHPGWKPLMQFQITRARQLYAESRPGIAMLAA 310

Query: 249 DV-FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           D    A         +L   +   +  V+         R   +  +   +
Sbjct: 311 DAQRCAVACARGYAGILDAIEAQHYDTVTRRARMKTPARLRLLWQAWRHR 360


>gi|226358145|ref|YP_002787884.1| phytoene synthase [Deinococcus deserti VCD115]
 gi|226319788|gb|ACO47782.1| putative phytoene synthase [Deinococcus deserti VCD115]
          Length = 313

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 86/278 (30%), Gaps = 4/278 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +     R      YL  LL P   R+++  +Y        + D         + L 
Sbjct: 13  AALRWCRVMTRVHSQTFYLGSLLYPRRQRLAVWAVYAACRVGDDIADEYTGAG-ARVELD 71

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
            W     S+  G   +   P    L    R+Y +P   F ++ E    D    S      
Sbjct: 72  RWWARVCSAFCGNPGD--DPMQTALAWATREYPIPLDAFAELYEGFCMDLTGQSYDSLDD 129

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y  R++  +  +   I      + +L      G A  +  ++  +     RG++Y P
Sbjct: 130 LTLYCRRVAGVVGFMVAPIGGYRGGAHTLEQALMLGQAMQLTNILRDVGEDLSRGRVYLP 189

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
            ++L   G+      +G+ +      +     L  ++  + RE +  +           +
Sbjct: 190 AELLSRFGVTHADLQAGRVTPEYRALMAQLCGLAREWYARGREGIPALEGRARVGVAAAA 249

Query: 259 I-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              E +L   + HG+   S         +   +     
Sbjct: 250 RTYEGILDDLEAHGYDNFSRRAHVPPRHKLRLLWQEYR 287


>gi|325130246|gb|EGC53016.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           OX99.30304]
          Length = 290

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 85/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLLRVRYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCRRVAGVVGCLIARILGFSDDQT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|219115962|ref|XP_002178776.1| phytoene synthase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409543|gb|EEC49474.1| phytoene synthase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 505

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 95/291 (32%), Gaps = 10/291 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR- 73
           +I ++                Y+  +L     R ++  +Y +      + D  R+     
Sbjct: 195 EIMAQAYFESGEVTSAFAKTFYMGTMLLDEPAREAIWAVYVWCRRTDEIVDAPRDDGDDM 254

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD---SYN 130
              L  W+   E   +    + +    + L   ++   L    F+DMI     D      
Sbjct: 255 LEDLSSWELRLERLWQYGQVQDVFDLCL-LDLRIQYPTLDITPFMDMIRGMLMDVPELGV 313

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLP 187
           D      +   Y +R++  +  ++  +             +     G+A  +  ++  + 
Sbjct: 314 DRYEAFDELHLYCYRVAGTVGLMSLPVFGCADGFNDEVAREPALSLGVAFQLTNILRDVG 373

Query: 188 IHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG++Y P + L   G+  E   + +  +     +K        Y  +AR  +  +
Sbjct: 374 EDASERGRVYLPQEDLRRFGVTEEQIFAQKVDENYINMMKFQIARARMYYERARRGVFML 433

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            P+   P    +     +L   + +G+  ++     ++  +   +  S  +
Sbjct: 434 APESRLPVQSSLDAYGRILDKIEANGYDSLTKRAYVDKWEKLSIIPFSWYR 484


>gi|59801240|ref|YP_207952.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae FA 1090]
 gi|194098541|ref|YP_002001603.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae
           NCCP11945]
 gi|239998929|ref|ZP_04718853.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae 35/02]
 gi|240014162|ref|ZP_04721075.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae DGI18]
 gi|240016597|ref|ZP_04723137.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae FA6140]
 gi|240080786|ref|ZP_04725329.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae FA19]
 gi|240112847|ref|ZP_04727337.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae MS11]
 gi|240115603|ref|ZP_04729665.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae PID18]
 gi|240117896|ref|ZP_04731958.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae PID1]
 gi|240121724|ref|ZP_04734686.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae PID24-1]
 gi|240123455|ref|ZP_04736411.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae PID332]
 gi|240125700|ref|ZP_04738586.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|240128156|ref|ZP_04740817.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|254493712|ref|ZP_05106883.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260440586|ref|ZP_05794402.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae DGI2]
 gi|268594770|ref|ZP_06128937.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268596904|ref|ZP_06131071.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268598923|ref|ZP_06133090.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268601277|ref|ZP_06135444.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268603600|ref|ZP_06137767.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268682078|ref|ZP_06148940.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684288|ref|ZP_06151150.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268686546|ref|ZP_06153408.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291043892|ref|ZP_06569608.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293399102|ref|ZP_06643267.1| squalene synthase HpnD [Neisseria gonorrhoeae F62]
 gi|59718135|gb|AAW89540.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae FA 1090]
 gi|193933831|gb|ACF29655.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae
           NCCP11945]
 gi|226512752|gb|EEH62097.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548159|gb|EEZ43577.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268550692|gb|EEZ45711.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583054|gb|EEZ47730.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268585408|gb|EEZ50084.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268587731|gb|EEZ52407.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268622362|gb|EEZ54762.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624572|gb|EEZ56972.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268626830|gb|EEZ59230.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291012355|gb|EFE04344.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291610516|gb|EFF39626.1| squalene synthase HpnD [Neisseria gonorrhoeae F62]
          Length = 290

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                + +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKQDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +++     A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDNAF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCRRVAGVVGCLIARILGFSDGKT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|156368126|ref|XP_001627547.1| predicted protein [Nematostella vectensis]
 gi|156214460|gb|EDO35447.1| predicted protein [Nematostella vectensis]
          Length = 289

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 9/283 (3%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             + +  +R IDY+ +L  LL P   R S+  +  F+ EL +VRD+        MR+Q+W
Sbjct: 12  LQYCVNLVRRIDYENFLCSLLIPKSSRNSVFSIRAFNAELAQVRDSVSERDIGRMRMQFW 71

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE----AHFFDSYNDSIFDC 136
           KD  +S  K       + F    L  V ++ L   +F  MIE        +    +  + 
Sbjct: 72  KDTLQSIYKAK----RNVFFYLCLQAVEKHKLSKMWFTRMIEARVRGQESNLNERAYPNI 127

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           K  E YA   +   ++L    L  +  +A      + G A  I  L+   P H +RG++ 
Sbjct: 128 KSLETYAENSAPSGLYLTLESLGVKDVNA-DHAASHVGKAFGIVTLLRATPYHGNRGKVL 186

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P DIL   G+  +  + G  S  +  A    A L   +L  AR     +      A +P
Sbjct: 187 LPNDILIKHGVSHQDIIRGSTSQPVKDAGFELASLANTHLNMARALKSKLPKAALRALLP 246

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               +  L H Q   F +   +      + P  ++  +  +++
Sbjct: 247 AVSCQEYLNHIQRADFDLFHPTLRERNQLLPLSLICHAWTRKY 289


>gi|218768185|ref|YP_002342697.1| putative poly-isoprenyl transferase [Neisseria meningitidis Z2491]
 gi|121052193|emb|CAM08516.1| putative poly-isoprenyl transferase [Neisseria meningitidis Z2491]
          Length = 290

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 84/279 (30%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                R +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +       A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDKVF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLLRVRYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCRRVAGVVGCLIARILGFSDDQT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPAADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
              +L      G   ++ +        +    L + +  
Sbjct: 241 YYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|254467866|ref|ZP_05081272.1| phytoene synthase [beta proteobacterium KB13]
 gi|207086676|gb|EDZ63959.1| phytoene synthase [beta proteobacterium KB13]
          Length = 280

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 97/268 (36%), Gaps = 6/268 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +    L++   +  L  +   P  + +L  LY F  E+  + D          +L WW 
Sbjct: 5   QYCKNKLKESKTNFALPFIFLNPQKKKALIALYAFCREVDDIADNCIEYEVGLAKLDWWH 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +  +        P +  LL  VR+Y+L   YF+++I+    D   +   D KQ + 
Sbjct: 65  SEINNLYQDN---PQHPVTKALLEPVRKYNLNQNYFIEIIDGMKMDLDFNRYEDFKQLQL 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y +R +S +  LA  I   E     L      GIA  +  +I  +     R ++Y PL+ 
Sbjct: 122 YTYRAASVVGILAAHIFGFENKKT-LDYAHNLGIALQLTNIIRDVGEDIRRNRIYIPLND 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSIT 260
           L    +D   F    +  ++   ++   +    +  KA   +         P  +   I 
Sbjct: 181 LKQFKIDENDFKGHVDPKKLINLMEYQIKRAKSFYSKAFSLLPKEDKNRQLPGMMMGYIY 240

Query: 261 ESVLKHAQNHG-FKIVSHSHTPNQLVRP 287
             +L   +      I++       + + 
Sbjct: 241 YDLLLSIEEGNLANILNERTQLTPIRKF 268


>gi|313125835|ref|YP_004036105.1| phytoene synthase [Halogeometricum borinquense DSM 11551]
 gi|312292200|gb|ADQ66660.1| phytoene synthase [Halogeometricum borinquense DSM 11551]
          Length = 338

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 86/277 (31%), Gaps = 11/277 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--TARNPITRDMRLQWWKD 82
               R      +LA  + P   R +   LY F      V D      P  +  RL+  + 
Sbjct: 11  KAIQRKTGKTFHLATRVLPERVRHATYVLYAFFRVADEVVDAEETAEPSAQRERLEQLRA 70

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                      E+  P       +  QYD+ ++     I+A   D          + E Y
Sbjct: 71  Q-----ALGRDETDDPVLSAFAELREQYDIADEDVNVFIDAMRSDITKSRYETYDELETY 125

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDI 201
               ++ +  + T I+ +     +       G A  +   +  +      R ++Y P + 
Sbjct: 126 MDGSAAAVGRMMTDIMQTPNAEKARPHATALGEAFQMSNFLRDVREDIVERDRVYLPQET 185

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+  E   S +  +     ++           +    ++Y+  D  F   +   + 
Sbjct: 186 LEKHGVTEEQLQSFRCDENFRAVMREEMRRTEALYREGVHGIQYLPEDCQFAVLLAAVLY 245

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYM--LSSSI 295
               +  +   + ++S + + +   +   +    +  
Sbjct: 246 ADHHRAIRKRAYDVLSVTPSLSTARKLALLVKTRAYW 282


>gi|219847858|ref|YP_002462291.1| Squalene/phytoene synthase [Chloroflexus aggregans DSM 9485]
 gi|219542117|gb|ACL23855.1| Squalene/phytoene synthase [Chloroflexus aggregans DSM 9485]
          Length = 331

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 91/282 (32%), Gaps = 9/282 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
           +  +    F    +R      + +    PP  R ++  LY F        D AR      
Sbjct: 51  RSLAEAYAFCDEVIRRHSKSFFFSTQFLPPPQRRAVRALYAFCRTTDDTVDMAR-TDPAR 109

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
              +W +       +    ++  P  +      ++Y+L      +++     D       
Sbjct: 110 ALAEWVR-----VARRPCLDTAHPVLLAWADTCQRYNLSPHLIDELLAGVAMDLTISRYA 164

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                  Y +R++S +  L   I  +   +    +    G+A  +  ++  +    +RG+
Sbjct: 165 TFADLWLYCYRVASVVGMLVIGITGAAPGATPYAIK--LGVALQLTNILRDVGEDANRGR 222

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPA 253
           +Y P+D L   GL  +  L+    +R    +K   E   +   ++   +  + P+     
Sbjct: 223 VYLPIDELARFGLTADDILARVYDERFIALMKFQIERTHRLYDESWPGIALLPPEVRLAV 282

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                +   +L     + +   +H    +   +   +     
Sbjct: 283 AAAARVYRGILDKIVANRYDSYNHRAYLSLREKVARLPGIWW 324


>gi|121998397|ref|YP_001003184.1| squalene/phytoene synthase [Halorhodospira halophila SL1]
 gi|121589802|gb|ABM62382.1| phytoene synthase [Halorhodospira halophila SL1]
          Length = 364

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 88/280 (31%), Gaps = 8/280 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           E  +   D       L         A  L P   R + + LY F  E     D       
Sbjct: 13  EPYLLHTDRRACRALLSTGSRTFMAASWLLPRERRDAATALYAFCREADDAVDEGPGDAA 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L    +  ++   G       P       +   Y++P      +IE   +D+    
Sbjct: 73  ALAAL---HERLDAVYAGRPQ--AHPADRAFACVAHYYNVPQTLPGALIEGFRWDAEGRR 127

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               ++   YA R++  +  + ++++D    SA  R     G+   +  +   +     R
Sbjct: 128 YETIEELYEYAVRVAGTVGVMMSLLMDVRSPSALARACD-LGVGMQLTNIARDVGEDARR 186

Query: 193 GQLYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           G+LY P   +   G+D ++FL   Q S  +   I+       ++  +A      +   V 
Sbjct: 187 GRLYLPRQWMYEAGVDPDAFLARPQFSPELGRVIQRLLCDADRHYERAMPGFHALPRRVR 246

Query: 252 PAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           P       +   + +  +      V+         +   +
Sbjct: 247 PGLCAARLLYAEIGRELERRDCDSVNQRAVVGAQRKLRVL 286


>gi|317164217|gb|ADV07758.1| putative poly-isoprenyl transferase [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 290

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +                + +++ LY F  EL  V D   NP      L WW
Sbjct: 4   LDYCRQKAEESRSSFLSGFRFLTQEKQDAVTVLYAFCRELDDVVDECSNPDVAQATLNWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +++     A    P +  L  +   + LP      +I+    D         ++ +
Sbjct: 64  RGDLDNAF--GGAMPEHPVNQALRQVKETFKLPKYELEALIDGMQMDLVQARYGSFEELK 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL        L      G+A  +  +I  +     RG++Y P++
Sbjct: 122 LYCRRVAGVVGCLIARILGFSDDKT-LEYADKMGLALQLTNIIRDVGEDARRGRIYLPME 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            +    +     L    +   +  +    +   +   +A   +            +  ++
Sbjct: 181 EMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYREAVSLLPDADKKAQKVGLVMAAV 240

Query: 260 TESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L      G   ++ +        +    L + +  
Sbjct: 241 YYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTWLFG 279


>gi|87308179|ref|ZP_01090321.1| probable phytoene synthase [Blastopirellula marina DSM 3645]
 gi|87289261|gb|EAQ81153.1| probable phytoene synthase [Blastopirellula marina DSM 3645]
          Length = 295

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 94/277 (33%), Gaps = 4/277 (1%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
              +    +  +  +    +  ++ +L P     ++  LY F  +   + D   + + + 
Sbjct: 3   HSLADSYAYCRKVAKQSGSNFVMSFMLLPRPKSQAMYALYAFMRQTDDLGDQPGDLLEKQ 62

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L+ W+    ++          P    L+  +R+ ++P +Y   +I+    D       
Sbjct: 63  TALKQWRHDLHAALA--GETPSDPRLPALVDTIRRNEIPVEYLTAVIDGVERDLTPQPFP 120

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
              + +HY +++++ +      +   +  +A    +   G A     ++  L      G+
Sbjct: 121 TFAESQHYCYQVAAAVGLACLHVWGFQGEAAIPPAL-ACGYAFQWTNILRDLHEDALAGR 179

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           LY P D +    +  + F + + +D     ++   +   ++  +A      +  D    F
Sbjct: 180 LYLPQDEMTRFDVSIDDFATSRATDGFRELMQFQIQRAEQFYDQAEPLQSLLHADGRKIF 239

Query: 255 -IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                    +L   +     ++    +     +   +
Sbjct: 240 PAMFCTYRGLLARIEQDPTAVLRQRVSVGSWKKMRIV 276


>gi|152967173|ref|YP_001362957.1| squalene/phytoene synthase [Kineococcus radiotolerans SRS30216]
 gi|151361690|gb|ABS04693.1| Squalene/phytoene synthase [Kineococcus radiotolerans SRS30216]
          Length = 332

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 95/290 (32%), Gaps = 7/290 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +           R   D     YLA LL P   R  +  LY F        D+  +P   
Sbjct: 33  DPQLRAAFETCRRLHADHGKTYYLATLLLPAAKRPYVWALYGFARYADEFVDSLTDPDP- 91

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           D  + W  D  +S      A    P    + + +R++D+P ++    +++   D      
Sbjct: 92  DALVAWSDDFLKSLDDEAGAGPQDPVGRAMAATMRRWDIPREHVEAFLDSMRMDITETGY 151

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
              +    Y +  ++ +      IL+     A     +  G A  +   +  +     RG
Sbjct: 152 ATYEDLNRYVYGSAAVIGLEMLPILEPLTPEAVA-PARALGEAFQLTNFVRDVGEDLDRG 210

Query: 194 QLYFPLDILGAVGLDRESFLSGQNS----DRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           ++YFP + L   GL RE   + + +      +   +   A    +   +A   +  + P 
Sbjct: 211 RVYFPAEDLERFGLSREDLFAARAARRTPPAVRELLAFEAARTRELYARAVPGLDMVHPT 270

Query: 250 VFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                     +   +L   +  GF ++          R    +   ++ R
Sbjct: 271 SRDCLRTAYRLYGGILDEVERAGFDVLDRRVRVGTSRRLAVAVPGLVRAR 320


>gi|109390039|gb|ABG29738.1| phytoene synthase 2-B1 [Triticum turgidum subsp. durum]
          Length = 254

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 85/256 (33%), Gaps = 9/256 (3%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
            +     YL   L  P  R ++  +Y +      + D   +       L  W+   E   
Sbjct: 2   EEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKRLEDLF 61

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +         +   L     ++ +  Q F DMIE    D +        +   Y + ++ 
Sbjct: 62  E---GRPYDMYDAALSDTASKFPIDTQPFRDMIEGMRLDLWKSRYRTFDELYLYCYYVAG 118

Query: 149 RLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            +  +   ++           +        GIA  +  ++  +     RG++Y PLD L 
Sbjct: 119 TVGLMTVPVMGIAPDSKASPESVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELA 178

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITES 262
             GL  E    G+ +D+    +K   +    +  +A + + ++      P    + +   
Sbjct: 179 QAGLTEEDIFRGKVTDKWRRFMKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQ 238

Query: 263 VLKHAQNHGFKIVSHS 278
           +L   + + +   +  
Sbjct: 239 ILDAIETNDYNNFTKR 254


>gi|205372899|ref|ZP_03225707.1| phytoene synthase [Bacillus coahuilensis m4-4]
          Length = 278

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 90/270 (33%), Gaps = 5/270 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
               S+        ++      Y A  L P   + ++  +Y F   +  + D   +P+T 
Sbjct: 1   MNSLSKAYQECEEVIKFHSKTFYRAFSLLPKDQKKAVWAVYAFCRIVDDIVDEHEDPVTD 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  +++ F    +G   +  +   V L  +  ++++  Q F DMI+    D  +   
Sbjct: 61  ---LYAFEEEFRLFLEGRFQD-DNSMWVALSDVFNRFNMDVQAFWDMIKGQRMDINSRVY 116

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                   Y++ ++S +  +   IL   +         + G A  +  ++  +     R 
Sbjct: 117 ETTNDVLDYSYHVASTVGLMLLPILAPGKEKTLREGAIHLGYAMQMTNILRDVGEDLERN 176

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-P 252
           ++Y P D+       +    S   +D      +  A     Y   A   +         P
Sbjct: 177 RIYLPRDLFTKYHYTQAELESLIKNDAFVAIWEDLARKAELYYESALLSINEYPLYSRTP 236

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
                 +  +++   + + + + +  +   
Sbjct: 237 VKGAALLYRAIIGQVRKNHYNVFTERNYVT 266


>gi|158316888|ref|YP_001509396.1| squalene/phytoene synthase [Frankia sp. EAN1pec]
 gi|158112293|gb|ABW14490.1| Squalene/phytoene synthase [Frankia sp. EAN1pec]
          Length = 326

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 90/301 (29%), Gaps = 20/301 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YLA LL P   R  +  LY F      + D   + +T + +
Sbjct: 18  LRSSYRAARELNAVHGRTYYLATLLLPRWKRPHVHALYGFARYADEIVDDLDSTLTDEAK 77

Query: 77  LQWWKDI------------------FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFL 118
            QW +                     + S  G +    +     +L  +R++DLP  YF 
Sbjct: 78  AQWLRQWGNRFLTALATGSDEAGAGADRSGAGSVGAGDAGVLPAVLHTIRRFDLPVAYFE 137

Query: 119 DMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQF 178
             + +   D              Y    +  +      IL+    SA     +  G A  
Sbjct: 138 AFLTSMAMDLTVTGYATWDDLMVYVHGSAVVIGLQMLPILEPVDASA-EPYARDLGAAFQ 196

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           +   +  +     RG++Y P   L   G+ RE   +G     +   +        +    
Sbjct: 197 LANFLRDVGEDLRRGRVYLPQASLDLFGVTRERLATGVVDGPVRRLLTHEIARARELFRS 256

Query: 239 AREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           AR  +R + P      +    +   +L   +   ++I+    +     R      + I+ 
Sbjct: 257 ARPGIRLLHPTSRDCVWTAFHLYGDILDEIERADYQILDRRVSVGLGRRLTVATPALIRA 316

Query: 298 R 298
            
Sbjct: 317 T 317


>gi|239831771|ref|ZP_04680100.1| phytoene synthase [Ochrobactrum intermedium LMG 3301]
 gi|239824038|gb|EEQ95606.1| phytoene synthase [Ochrobactrum intermedium LMG 3301]
          Length = 277

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            + +    L  LR+ D DRYL+ L +P   R  L+ LY F+ E+ R+R+    P+  ++R
Sbjct: 1   MNENEAHCLALLREADRDRYLSVLYAPEDRRGGLAALYAFNAEIARIRELVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIGTIDKYELPRAAFDNYCEARIFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S +I LA  ILD +   A      +AG+AQ +  L+  +PIH  RGQLY
Sbjct: 119 NDLEGYCGETASAIIQLAGFILDRDAAQAQTETTGHAGVAQAVTGLLRLMPIHRRRGQLY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L AVG+ RE FL+G++       I I      ++L    +    +   + PAF+P
Sbjct: 179 VPADMLQAVGVTREVFLAGEDKAATGRVISIMLAFAREHLAIFEKSKSQLPKSLAPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L+  +  G + V      + + + W M  +S 
Sbjct: 239 LALVPAYLRAIERLGTETVEKVADISAIRKQWLMFRASF 277


>gi|118589133|ref|ZP_01546540.1| hypothetical protein SIAM614_13813 [Stappia aggregata IAM 12614]
 gi|118438462|gb|EAV45096.1| hypothetical protein SIAM614_13813 [Stappia aggregata IAM 12614]
          Length = 283

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 2/278 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            + D       +R  D DRYL  LL+P  +R  L  LY +  E+ R+R+    P+  ++R
Sbjct: 1   MTTDFDHAADVVRQFDKDRYLTALLAPETHRDGLMALYAYSAEIARIRELVSEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+ E +  G +  + +P +  LL  + +Y LP Q  + M +A  FD YND +   
Sbjct: 61  LQWWRDLLEGTEHGAV--ASNPVANALLQTIERYALPKQSLVAMADARVFDLYNDQMPTL 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E YA    S LI LA ++L+  R   +     +AG+A  +  L+  LP H  R Q+Y
Sbjct: 119 NDLEGYAGETVSGLIQLACLVLNDGRDPGTATAAGHAGVAYALTGLMRALPWHASRQQMY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+     LD ES   G+ +  +   +         +L + R+    +      AF+P
Sbjct: 179 LPKDVCERHNLDTESVFRGETTPELRAVLAEMRGHVRHHLGRVRQVAEEVPTACQSAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           + + E  LK  +      +      +QL R W +  +S
Sbjct: 239 LVLVEPFLKKLEQDSLDPLKQVAELSQLRRQWILWRAS 276


>gi|115523337|ref|YP_780248.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisA53]
 gi|115517284|gb|ABJ05268.1| phytoene synthase [Rhodopseudomonas palustris BisA53]
          Length = 350

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 84/277 (30%), Gaps = 8/277 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D       L++     + A L+ P         LY F        D   +       L
Sbjct: 4   QADLATCREMLKEGSRTFHAASLVLPKWIADPAVALYAFCRVADDAVDLGTDRAAAVDML 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +   D               P       +V ++ +P      +IE   +D+         
Sbjct: 64  KDRLDR-----ACRGLPKPDPVDRAFADVVAKFGIPEAIPAALIEGMEWDAEGRRYDTLS 118

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y  R++  +  + T+++         R     G A  +  +   +      G+LY 
Sbjct: 119 DLYSYCARVAGTVGVMMTLVMGKRSPDVVARACD-LGCAMQLTNICRDVGEDARAGRLYL 177

Query: 198 PLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-AFI 255
           PL  +   GL+ + +L +   + +I+  ++   +       +A   +  +     P  F 
Sbjct: 178 PLSWMREAGLEPDEWLQNPVFNAQIAGIVRRLLDTADALYDRATLGIANLPRTCRPGIFA 237

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             ++   + +  +  G   +S     +   +   +  
Sbjct: 238 ARALYAEIGREVERSGLDSISGRAVVSTGRKLAVLAR 274


>gi|124266480|ref|YP_001020484.1| farnesyl-diphosphate farnesyltransferase [Methylibium
           petroleiphilum PM1]
 gi|124259255|gb|ABM94249.1| farnesyl-diphosphate farnesyltransferase [Methylibium
           petroleiphilum PM1]
          Length = 287

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 100/287 (34%), Gaps = 12/287 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +V           Y A L  PP  R +++  Y F  E+  V D   +P     +L WW
Sbjct: 4   QQYVQDKAAASGSSFYYAFLFLPPPRRAAITAFYAFCREVDDVVDEVSDPGVAATKLAWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +     +      ++  P    L+  V  Y +  ++   +I+    D       D     
Sbjct: 64  RKEVAEAFA---GQAHHPVLQALMPHVADYGIRAEHLSAVIDGCEMDLTQTRYLDDVTLR 120

Query: 141 HYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            Y   ++  +  +A  I   E        + R     G A  +  +I  +     RG++Y
Sbjct: 121 RYCHLVAGVVGEVAASIFGCEPGRPLSEGTRRYAHTLGRAFQLTNIIRDVGDDARRGRIY 180

Query: 197 FPLDILGAVGLDRESFLSGQN----SDRISLAIKIFAELGLKYLFKAREEMRYILPDV-F 251
            P+  L    +     L  +     S+R +  +K  AE   +   +A   +         
Sbjct: 181 LPVSELQRFDVKAHELLKREAPWGYSERFTSLMKFQAERAHRSYDEAFAALPADERRAQR 240

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           P  +   I  ++L+  +  GF+++        L + W    ++ ++R
Sbjct: 241 PGLMMAEIYRTLLREIEATGFQVLHQRTALTPLRKLWLAWKTNWRER 287


>gi|39934585|ref|NP_946861.1| squalene/phytoene synthase [Rhodopseudomonas palustris CGA009]
 gi|39648434|emb|CAE26955.1| CrtB phytoene synthase [Rhodopseudomonas palustris CGA009]
          Length = 355

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 88/283 (31%), Gaps = 8/283 (2%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           + + +   D L     +++  +  + A  + P         LY F        D   +  
Sbjct: 4   QSDMLAQSDMLACREMIKEGSHTFHAASKVLPRRISDPAIALYAFCRVADDAVDLGLDRA 63

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                L+   D               P       +V ++ +P      +IE   +D+   
Sbjct: 64  AAVELLKDRLDR-----ACRGVPRAYPSDRAFADVVARFSIPPAIPEALIEGLEWDAQGR 118

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                     Y  R++  +  + T+++   +     R     G A  +  +   +     
Sbjct: 119 RFETLSDLYSYCARVAGTVGVMMTLVMGQRKPDIVARACD-LGCAMQLTNIARDIGEDAR 177

Query: 192 RGQLYFPLDILGAVGLDRES-FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G++Y PL  +   GLD E+   + + +  I+  +K   +       +A   +  +    
Sbjct: 178 NGRIYMPLSWMREAGLDPETWLANPKFTPEIASIVKRLIDTADALYDRATLGIANLPRSC 237

Query: 251 FP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            P  F   ++   + +  +  G   VS     +   +   +  
Sbjct: 238 RPGIFAARALYAEIGREVERSGLDSVSSRAVVSTGRKLAVLAR 280


>gi|255572258|ref|XP_002527068.1| Phytoene synthase, chloroplast precursor, putative [Ricinus
           communis]
 gi|223533573|gb|EEF35312.1| Phytoene synthase, chloroplast precursor, putative [Ricinus
           communis]
          Length = 370

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 93/314 (29%), Gaps = 37/314 (11%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLA----------------------------CLLSPPLYRI 48
                    +         YL                              LL     + 
Sbjct: 50  LEEAYKRCKKICAQNAKTFYLGLINYILFPILLLGKPVIYNKFKCFLHSGTLLMTEEQQK 109

Query: 49  SLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR 108
           ++  +Y +      + D           L  W+   ES                L   V 
Sbjct: 110 AIWAIYVWSRRTDELVDGPNAEHMSSAVLDLWEQRLESIFD---GNPHDILDAALTDTVF 166

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
           ++ L  + F DMIE    D+      + ++   Y + ++  +  +   +L     S    
Sbjct: 167 KFALHIEPFKDMIEGMRMDTRKFRYENFEELYLYCYYVAGTVSLMTVPVLGIAPDSCVSA 226

Query: 169 VIKYAG-----IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
              Y G     IA  +  ++  +     RG++Y P D L   GL  E   + + +D+   
Sbjct: 227 QTIYYGALYMAIANQLTNILRDVGEDGLRGRIYLPQDELAQFGLCHEDIFTRKVTDKWKE 286

Query: 224 AIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
            +K        Y   A + + ++      P +  + +   +L   +++ +  ++ +    
Sbjct: 287 FMKEQITRARYYFKLAEDGISHLHKASRWPVWSCLMLYSKILDAIEDNDYDNLTKTAYVG 346

Query: 283 QLVRPWYMLSSSIK 296
           +  +   +  +  K
Sbjct: 347 KTEKLLTLPLAYAK 360


>gi|192290098|ref|YP_001990703.1| Squalene/phytoene synthase [Rhodopseudomonas palustris TIE-1]
 gi|192283847|gb|ACF00228.1| Squalene/phytoene synthase [Rhodopseudomonas palustris TIE-1]
          Length = 355

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 88/283 (31%), Gaps = 8/283 (2%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           + + +   D L     +++  +  + A  + P         LY F        D   +  
Sbjct: 4   QSDMLAQSDMLACREMIKEGSHTFHAASKVLPRRISDPAIALYAFCRVADDAVDLGLDRA 63

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                L+   D               P       +V ++ +P      +IE   +D+   
Sbjct: 64  AAVEVLKDRLDR-----ACRGVPRAYPSDRAFADVVARFSIPPAIPEALIEGLEWDAQGR 118

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                     Y  R++  +  + T+++   +     R     G A  +  +   +     
Sbjct: 119 RFETLSDLYSYCARVAGTVGVMMTLVMGQRKPDIVARACD-LGCAMQLTNIARDIGEDAR 177

Query: 192 RGQLYFPLDILGAVGLDRES-FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G++Y PL  +   GLD E+   + + +  I+  +K   +       +A   +  +    
Sbjct: 178 NGRIYMPLSWMREAGLDPETWLANPKFTPEIASIVKRLIDTADALYDRATLGIANLPRSC 237

Query: 251 FP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            P  F   ++   + +  +  G   VS     +   +   +  
Sbjct: 238 RPGIFAARALYAEIGREVERSGLDSVSSRAVVSTGRKLAVLAR 280


>gi|75675958|ref|YP_318379.1| squalene/phytoene synthase [Nitrobacter winogradskyi Nb-255]
 gi|74420828|gb|ABA05027.1| squalene/phytoene synthase [Nitrobacter winogradskyi Nb-255]
          Length = 286

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 4/286 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +   +  + F    +R  D+  Y   L +P   R +L  LY F+ E++RVR+    P+  
Sbjct: 3   DTTRNTSAAFCAELVRTHDFGNYATTLFAPLRSRRALLALYAFNVEIVRVREQITQPLAG 62

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           ++RLQWW D+      G      +P + ELL  +R++DLP      +IE H FD YND +
Sbjct: 63  EVRLQWWMDMLAG--AGHGGVEGNPVAAELLLAIREHDLPVALLQRLIEVHQFDLYNDPM 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D    E Y    S  L  L++  +          + ++AG+A  + ++I     +  R 
Sbjct: 121 PDIAALEQYLADTSCALFSLSSRTIGQRPDET-DHLARHAGLACGMARVIANFGFYASRR 179

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           Q Y PL +L   G+D E   +G+++  +  AI+  AE    +L  A   +  + PD    
Sbjct: 180 QSYVPLKLLEQHGVDLEQMFTGRDAPSVRAAIRGLAEEARSHLKVALGLLSDLPPDSRGV 239

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++P+++    L      G          ++L   W M  +S  K F
Sbjct: 240 YLPLALVRRALDDVGGAGINPFMPRP-ISRLRVLWTMWRASRSKAF 284


>gi|115373142|ref|ZP_01460444.1| phytoene synthase [Stigmatella aurantiaca DW4/3-1]
 gi|115369898|gb|EAU68831.1| phytoene synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 336

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 96/313 (30%), Gaps = 26/313 (8%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-- 66
           N+ ++  + SR   +     R      + A  L     R +   LY F   L  + D   
Sbjct: 2   NSHEDPHLVSRGYRWARAVTRHHAKSFFFASYLLFGERRKAAFALYAFCRRLDDMVDETG 61

Query: 67  -ARNPITRDMRLQWWKDIFESSTKGLIA--------------------ESISPFSVELLS 105
               P+    RL+  +         +                               L  
Sbjct: 62  EGSAPLDLKARLERARQRVAEVYLPMPELAAPGLESPAQRLMGAQEQCPWNEGEFAALKH 121

Query: 106 IVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA 165
            + ++ +P Q F D+I     D         ++ + Y +R++  +  + T +L      A
Sbjct: 122 CIHRFRIPEQPFQDLISGMEMDLTKHRYATFEELDLYCYRVAGVVGLMLTPVLGCVDERA 181

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
                   G    +  ++  +     RG++Y P   L + GL  E   +G+  DR    +
Sbjct: 182 VAHAAD-LGRGMQLTNILRDVREDLERGRVYLPSSELASFGLSEEDLRAGRVEDRWRNFM 240

Query: 226 KIFAELGLKYLFKAREEMRYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +        Y   A   + Y+          +   I   +L+  +   + + S       
Sbjct: 241 RFQISRARAYYASAAAGLPYLTGLGSRRMVRLMGGIYGDILRVIEERDYDVFSARAYVPD 300

Query: 284 LVRPWYMLSSSIK 296
             +    +++ ++
Sbjct: 301 RRKLALAVAAMVR 313


>gi|329118807|ref|ZP_08247504.1| hytoene synthase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465094|gb|EGF11382.1| hytoene synthase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 282

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 91/282 (32%), Gaps = 7/282 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +   +            +L+  L      R +L  LY F  EL  V D   +    +M L
Sbjct: 2   QPLEYCREKA-LSSRSSFLSGFLFLSKNKRDALVVLYAFCRELDDVADGCSDKNVAEMSL 60

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +WW+                P +  L  +V  + +P++   ++IE    D   +   D  
Sbjct: 61  RWWQADLAKVFSD--GLPEHPVNKALRQVVNTFAMPHEELAEIIEGMLMDLRQNRYADFA 118

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y +R++  +  L   IL  E         +  G+A  +  +I  +      G++Y 
Sbjct: 119 SLLLYCYRVAGVVGRLVARILGFENPQTLA-YAEKQGLALQLTNIIRDVGEDARMGRIYL 177

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIP 256
           P D     G+     L  + ++  +  +        +    AR  +            + 
Sbjct: 178 PQDECRRFGVTENPILQCRPTEEFAALMDFQTARAEQVYRDARALLPPEDCKKQNAGLVM 237

Query: 257 VSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +I   +L+  +  G   ++ +        +    L +    
Sbjct: 238 AAIYYVLLQEIRRDGAANVLKYKTVIPAPRKMRIALKTRFFG 279


>gi|292656645|ref|YP_003536542.1| phytoene synthase [Haloferax volcanii DS2]
 gi|291370589|gb|ADE02816.1| phytoene synthase [Haloferax volcanii DS2]
          Length = 339

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 83/272 (30%), Gaps = 5/272 (1%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
               +      Y A  L P   R +   LY F      V D          R +  +   
Sbjct: 11  KDIQQRTGKTFYFATRLLPERVRHATYVLYAFFRVADEVVDAEETAPPAQQRDRLERLRA 70

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E      + E+  P       +  +Y +        I+A   D   D      + E Y  
Sbjct: 71  E---ALGVVETDDPVLSAFAELRARYGIDPDDVNVFIDAMESDIEKDRYETYAELETYMD 127

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDILG 203
             +S +  + T ++  +   A+L      G A  +   +  +      R ++Y P   L 
Sbjct: 128 GSASAVGRMMTAVMRPDDPEAALPHATALGQAFQMSNFLRDVGEDVVERDRVYLPQTTLD 187

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITES 262
             G+D E  L     +R++  ++                + Y+  D  FP  +   +   
Sbjct: 188 RHGVDTEQILDLDFDERVADVMRDELRRTESLYRDGVAGIEYLPADCQFPVLLSAVLYAD 247

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             +  +   +  ++ +       +   +  ++
Sbjct: 248 HHRSIRKLDYDTLTTTPELGFGRKLTLLAKTA 279


>gi|288919018|ref|ZP_06413359.1| Phytoene synthase [Frankia sp. EUN1f]
 gi|288349558|gb|EFC83794.1| Phytoene synthase [Frankia sp. EUN1f]
          Length = 357

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 94/314 (29%), Gaps = 29/314 (9%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            ++                    YLA LL P   R  +  LY F      + D   + +T
Sbjct: 14  TDERLRASYRRARELNAAHGRTYYLATLLLPKWKRPHVHALYGFARYADEIVDDLDSTLT 73

Query: 73  RDMRLQWWKDI-----------------------FESSTKGLIAESISPFSVELLSIVRQ 109
            + + QW +                            +     A++ +     +L  +R+
Sbjct: 74  DEAKAQWLRRWGSTLVTSLAAGADVTAAETGASAEGEAADAEAADAEATVLPAVLHTIRR 133

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV 169
           +DLP  YF   + +   D    S         Y    +  +      IL      A+   
Sbjct: 134 FDLPVGYFETFLASMAMDLTITSYATWDDLMVYIHGSAVVIGLQMLPIL-EPVNPAAEPY 192

Query: 170 IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
            +  GIA  +   I  +     RG++Y P   L   G+  +   +G     +   +    
Sbjct: 193 ARDLGIAFQLANFIRDIGEDLRRGRVYLPQSSLDLFGVTWDHLATGVADGPVRRLLAFEI 252

Query: 230 ELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPW 288
               +    AR  +R + P           +   +L   +   ++I+    +     R  
Sbjct: 253 ARARELFRSARPGIRLLHPTSRDCVSTAFRLYSGILDEIERADYQILDRRVSVGLGRRLG 312

Query: 289 Y----MLSSSIKKR 298
                ++ ++  +R
Sbjct: 313 VAAPGLVRAAYSRR 326


>gi|223936910|ref|ZP_03628819.1| squalene synthase HpnD [bacterium Ellin514]
 gi|223894479|gb|EEF60931.1| squalene synthase HpnD [bacterium Ellin514]
          Length = 289

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/275 (19%), Positives = 99/275 (36%), Gaps = 6/275 (2%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMRLQWWKDI 83
               +    +  LA +L P   R  +S LY F  E+  V D    P   R  RL  W+  
Sbjct: 5   RTITQKSASNLALAFILLPKAKRDGMSALYAFCREVDDVADDESVPTPERRTRLSAWRTD 64

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            +              + EL  +++Q  L    F ++I+    D       D +  E Y 
Sbjct: 65  IQR--ACNNQTPEFLVNRELQPVIQQCHLAFGLFDELIKGVEMDLDIKRYPDYEALEQYC 122

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           +R++S +  L+  I   +   A      Y G A  +  ++  +     RG++Y PL  L 
Sbjct: 123 YRVASVVGLLSIEIFGYQD-KACRDYAIYLGKALQLTNILRDVRSDAERGRIYLPLSELK 181

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITES 262
              +  E  L  + S R     +   +    +  +AR  +  +       A +  S+   
Sbjct: 182 KFNVSEEEILRFEYSGRFFKLAESVDQRARYFYHQARITLPKVDRRSMVAAELMGSVYWR 241

Query: 263 VLKHAQNHGFKIVS-HSHTPNQLVRPWYMLSSSIK 296
           +LK  +   F +        ++  +   +L +  +
Sbjct: 242 LLKKLERQEFDVFGPQPTRLSKWQKILLILRTGFR 276


>gi|265983988|ref|ZP_06096723.1| phytoene synthase [Brucella sp. 83/13]
 gi|264662580|gb|EEZ32841.1| phytoene synthase [Brucella sp. 83/13]
          Length = 280

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 2/282 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
            KI +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  
Sbjct: 1   MKIMNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPG 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           ++RLQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +
Sbjct: 61  EVRLQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPM 118

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                 E Y    +S LI LA  ILD +   A      +AG+AQ +   +  LPIH  RG
Sbjct: 119 PSRNDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGSLRLLPIHRRRG 178

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           Q+Y P D+L A+G+ R+  LS +++     A+ I   L  ++L    +    +   + PA
Sbjct: 179 QVYVPADMLKAIGVTRDMLLSSEDTSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPA 238

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           F+P+++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 FLPMALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 280


>gi|320168458|gb|EFW45357.1| phytoene synthase [Capsaspora owczarzaki ATCC 30864]
          Length = 455

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 104/292 (35%), Gaps = 4/292 (1%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            +++           + +  ++  DY+ YL  LL P   R     +   + E+ RV D  
Sbjct: 168 TSSQPSSARAVTPEQYCMDLVKKNDYEHYLETLLLPKRARDVSFAVRALNVEVARVSDVT 227

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
            +     +RLQ+W    ++           P +  L ++ +   L +++   +IE     
Sbjct: 228 TSKHAGRIRLQFW---LDAVAAAAKGTPHHPVAQALQNVYKTQKLTSRWVSRLIEERTKL 284

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
             +      +  E Y     S L++L    +  +   A      + G A+ I  L+   P
Sbjct: 285 LDDKPFGTLQDVETYGENTYSGLLYLTLESMGIQSIQA-DHAASHVGKAEAIVTLLRATP 343

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
            +    ++Y P+++    G+ +E  + G N+  +       A     +L  A+     + 
Sbjct: 344 ANASNRRVYLPMELTAKHGVVQEDVVRGVNTKALQEVAYELASSAHVHLQTAQAMAADLP 403

Query: 248 PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                  +P       L+  Q   F +   S      + P+ +   S +K F
Sbjct: 404 AGTAKVLLPAVPCAEFLERIQQADFNLFEPSLQQRNPMLPFSLFKHSWRKTF 455


>gi|319400257|gb|EFV88492.1| squalene/phytoene synthase family protein [Staphylococcus
           epidermidis FRI909]
          Length = 285

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 33/279 (11%), Positives = 92/279 (32%), Gaps = 4/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  + ++        A    P   R ++  +Y     +    D   NP          
Sbjct: 8   YKYCHQIMKKHSKSFSYAFDFLPETQRQAVWVIYAVCRTIDDSIDVYENPALLQEIEDDI 67

Query: 81  KDIFESSTKGLIAESISP-FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
             I +SS+  ++    +P     L  + +Q+++  + F  +I     D         ++ 
Sbjct: 68  VLIEQSSSIKILQFKSNPYIMSALHEVSQQFNIKYESFYHLIRTVRQDQDFKMFATDEEL 127

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y + ++  +  L T +L       +  + +  G A  +  ++  +   +   ++Y   
Sbjct: 128 MQYCYGVAGTVGELLTPLLAENPNEKTYHIARTLGQALQLTNILRDVGEDFENNRIYLSQ 187

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-IPVS 258
             L    +  E   +  N+ +     + +A++  K      + +     +      +   
Sbjct: 188 KQLDNFNVSIEHEYNYGNTKQYIELWEHYAQIAEKDYTTTLDHIDVFNKESQYIVELAAV 247

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           I  ++L   +   +  +      ++L++   +  S   K
Sbjct: 248 IYRAILDEVRKSCY-TLHRRVYVSKLIKM-KLYQSVRTK 284


>gi|225627383|ref|ZP_03785420.1| phytoene synthase [Brucella ceti str. Cudo]
 gi|225617388|gb|EEH14433.1| phytoene synthase [Brucella ceti str. Cudo]
 gi|326408914|gb|ADZ65979.1| phytoene synthase [Brucella melitensis M28]
          Length = 280

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 2/282 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
            KI +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  
Sbjct: 1   MKIMNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPG 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           ++RLQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +
Sbjct: 61  EVRLQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPM 118

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                 E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RG
Sbjct: 119 PSRNDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRG 178

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           Q+Y P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PA
Sbjct: 179 QVYVPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPA 238

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           F+P+++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 FLPMALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 280


>gi|238062099|ref|ZP_04606808.1| squalene/phytoene synthase [Micromonospora sp. ATCC 39149]
 gi|237883910|gb|EEP72738.1| squalene/phytoene synthase [Micromonospora sp. ATCC 39149]
          Length = 320

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 85/287 (29%), Gaps = 9/287 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN--PITRD 74
            +          R      YLA  L P   R  +  LY F      + D   N  P  R 
Sbjct: 18  LTAAYDRCRELHRRHGRTYYLATRLLPAWKRRHVHALYGFTRYADEIVDRTENLPPAGRA 77

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
            RL  W   F +   G   +   P    +L  +  +DL    F   + +   D    +  
Sbjct: 78  ARLDDWSSRFLAGLGGAPVD--DPLLPAVLHTIAVFDLDRADFTSFLRSMAMDLTVTAYP 135

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                  Y    ++ +  +   IL S   +A+    +  G A  +   I  +     RG+
Sbjct: 136 TYDDLLDYMEGSAAVIGTMMLPILGSSDPAAAREPARQLGFAFQLTNFIRDVAEDLARGR 195

Query: 195 LYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            Y P + L    + RE        G ++ RI   I+        +   A   +  + P  
Sbjct: 196 TYLPDEDLAKFDVTREDLFAAAARGWSTPRIRDLIEYEVSRAQAHYEAAAPGITLLAPAS 255

Query: 251 FPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                   ++   +L       + +        +  R      + + 
Sbjct: 256 QACMRTAYALYGGILDEVAAQDYDVFVRRALVPRRRRLAVAGRALLT 302


>gi|149173741|ref|ZP_01852370.1| Squalene/phytoene synthase [Planctomyces maris DSM 8797]
 gi|148847271|gb|EDL61605.1| Squalene/phytoene synthase [Planctomyces maris DSM 8797]
          Length = 323

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 81/292 (27%), Gaps = 12/292 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +  +       +  +     P   R     +Y F      + D   +       
Sbjct: 27  LDEAHAYCRKIALGHYENFPVVSWALPRELRQHFYNVYAFCRWADDLGDEIEDADQSLQL 86

Query: 77  LQWWKDIFESSTKGLIA----------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           L WW+       + +              + P  + L   + +YDLP   F D+I+A   
Sbjct: 87  LAWWRSQLVDCYRSIQNTAVPPQSSVMPRLHPVFIALTPTIVKYDLPQTAFDDLIQAFEQ 146

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
           D          +   Y  R ++ +  L   +  +                  +      +
Sbjct: 147 DQRVSEYQTFTELLSYCQRSANPVGRLVLHLCQTVTEETVA-WSDSICTGLQLANFWQDV 205

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
              +  G++Y P +     G  R  F   + +      +    +   +YL      +  +
Sbjct: 206 ARDFAIGRIYLPREDCEQFGYTRAQFEHNEFNTAFQNLMAFEVQRARQYLLNGVPLIAQL 265

Query: 247 LPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
              +     + +     +L H +   F +       ++      +  S +++
Sbjct: 266 PGRLQVDIDLFIQGGLKILDHIEQQQFNVWKQRPQVSRFEFGLLLFQSLLRR 317


>gi|149176078|ref|ZP_01854695.1| putative terpenoid synthase [Planctomyces maris DSM 8797]
 gi|148845232|gb|EDL59578.1| putative terpenoid synthase [Planctomyces maris DSM 8797]
          Length = 293

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 92/288 (31%), Gaps = 6/288 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-M 75
            S    +  +  +    + Y + L        ++  LY +   +  + D +   +     
Sbjct: 5   LSESYAYCQQLAKQTAGNFYYSFLALRKEQFQAMCVLYAYMRTVDDLGDQSDLSLADRGD 64

Query: 76  RLQWWKDIFESSTKGLIAE---SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            L+ W+       +           P    L  ++++Y +P+ YF  +I     D    +
Sbjct: 65  ALEIWRRELHQVLEDQTDPDATPFHPCFPALGDVIQRYRIPHDYFFAVITGVESDLQPVT 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               +Q + Y + ++  +      I       A    ++  GIA  +  ++  L      
Sbjct: 125 FATFEQLKEYCYHVAGVVGLCCIHIWGFHDERAFAAGVE-CGIAFQLTNILRDLGEDIQM 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G++Y P + L   G  R    S    +R    ++   +    Y   +     Y+ P+   
Sbjct: 184 GRVYLPQEDLDRFGYARADIQSQIYDERFRELMQFEVDRARSYYQSSERLFDYLSPEGQR 243

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                  I   +L   +   + + +      +  +      + +  R+
Sbjct: 244 ILKAMHRIYGGILTEMERMDYNVYATRCGLPRWRKLLIAGEAIVAARW 291


>gi|40062986|gb|AAR37856.1| phytoene synthase [uncultured marine bacterium 443]
          Length = 350

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 85/275 (30%), Gaps = 8/275 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           S D       L +     Y A  L P + R +   LY F  E   + D   +P      L
Sbjct: 11  STDMGLCKEQLSNGSRSFYFASHLLPSVMRHAACGLYAFCREADDMVDEGEDPKKALEIL 70

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
            +  D          A         L  IV  Y +P      ++E   +D+        +
Sbjct: 71  HYRLDRIYEVKPQYKAT-----DRVLTQIVHTYHMPRALLNALLEGFAWDADGKIYHSIE 125

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y+ R++  +  + ++++         R     G A  +  +   +      G++Y 
Sbjct: 126 DVYDYSARVAGAVGIMMSVLMGVRDAKTLARAAD-LGTAMQLTNIARDVGEDARLGRIYL 184

Query: 198 PLDILGAVGLDRES-FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           PLD L + G+D      +   +D +   +K   E       ++   +  +     P    
Sbjct: 185 PLDELRSEGVDPAQMLANPAYTDGVGRVVKRLLERADWLYTRSDHGIAQLPRKYQPGIRA 244

Query: 257 VS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              +  ++      + +  +          +   +
Sbjct: 245 ARKLYAAIGDKVIENNYNSIDQRAIVGTRRKLGLL 279


>gi|320160754|ref|YP_004173978.1| phytoene synthase [Anaerolinea thermophila UNI-1]
 gi|319994607|dbj|BAJ63378.1| phytoene synthase [Anaerolinea thermophila UNI-1]
          Length = 297

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 96/276 (34%), Gaps = 11/276 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            + +R+     Y A  L P   R ++  LY F      + D      T    L  W++  
Sbjct: 18  EQIIREHSKTFYFATALLPSRKRYAIRALYAFCRASDDLVDR---EQTTLSDLDAWREQV 74

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                    E  +P       +  +Y +   Y  ++++    D         +  + Y +
Sbjct: 75  NLPAH----EQSNPVLKAWSEVREEYAINRLYEKELLDGIEMDLNFQVYPTFEALKVYCY 130

Query: 145 RISSRLIHLATMILDSER---YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           R++S +  LA  I+   +   +  +       GIA  +  ++  +     R ++Y PL+ 
Sbjct: 131 RVASTVGLLAIPIIGLAKGVSFEQAAPFAIQLGIALQMTNILRDIGEDARRNRVYLPLED 190

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-IT 260
           L    L  +  L+G   DR    +K       +   +A   + ++     PA    + + 
Sbjct: 191 LQKFNLTHQDILNGVYDDRFIRLMKFEISRTRELYQQAIPGIAFLSKAARPAVGAAAFLY 250

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            ++L   +N  + + +         +   + S   K
Sbjct: 251 RAILDEIENIQYHVHTLRAHTKGWKKIAMLPSILWK 286


>gi|226307060|ref|YP_002767020.1| phytoene synthase [Rhodococcus erythropolis PR4]
 gi|226186177|dbj|BAH34281.1| probable phytoene synthase [Rhodococcus erythropolis PR4]
          Length = 314

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 91/303 (30%), Gaps = 20/303 (6%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
               S    F     R+     +LA  L P   R ++  LY F   +  V D    P  R
Sbjct: 1   MNALSASYEFCEDVTREHGRTYFLATRLLPEPRRRAVHALYAFARVVDDVVDEPSGPHER 60

Query: 74  DMRLQWWKD----IFESSTKGLIAESISP-----FSVELLSIVRQYDLPNQYFLDMIEAH 124
              L   +       ++ T      S  P             V+ +D+P  YF    E+ 
Sbjct: 61  GTVLADVERAAVTALDNPTATGGFPSTVPLDLTRVLPAFADAVKTFDIPRAYFDAFFESM 120

Query: 125 FFDSYND-----SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-RVIKYAGIAQF 178
             D+ +            +   Y +  +  +      IL                G A  
Sbjct: 121 RMDAPDTAKFRPVYNTMDELSEYMYGSAVVIGLQMLPILGVSVPQQEAVVPASNLGEAFQ 180

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSD----RISLAIKIFAELGLK 234
           +   I  +     RG+LY P     A G+D E    G+ +     R+  A+  F  +   
Sbjct: 181 LTNFIRDVGEDLDRGRLYLPAGEFAAFGVDIEMLEHGRRTGTVDVRVKRALAHFIAVTRG 240

Query: 235 YLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               A   +  +   V P+      +  ++L   +   F+I+    +     R       
Sbjct: 241 RYRSAESGIPMLDRRVQPSIRTAFVLYGAILDQVERADFRILHRRVSVPGRTRLRVAAPG 300

Query: 294 SIK 296
            ++
Sbjct: 301 LVR 303


>gi|56698928|gb|AAW23162.1| phytoene synthase [Rhodococcus erythropolis]
          Length = 314

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 91/303 (30%), Gaps = 20/303 (6%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
               S    F     R+     +LA  L P   R ++  LY F   +  V D    P  R
Sbjct: 1   MNALSASYEFCEDVTREHGRTYFLATRLLPEPRRRAVHALYAFARVVDDVVDEPSGPHER 60

Query: 74  DMRLQWWKD----IFESSTKGLIAESISP-----FSVELLSIVRQYDLPNQYFLDMIEAH 124
              L   +       ++ T      S  P             V+ +D+P  YF    E+ 
Sbjct: 61  GTVLADVERAAVTALDNPTATGGFPSTIPLDLTRVLPAFADAVKTFDIPRAYFDAFFESM 120

Query: 125 FFDSYND-----SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-RVIKYAGIAQF 178
             D+ +            +   Y +  +  +      IL                G A  
Sbjct: 121 RMDAPDTAKFRPVYNTMDELAEYMYGSAVVIGLQMLPILGVSVPQQEAVVPASNLGEAFQ 180

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSD----RISLAIKIFAELGLK 234
           +   I  +     RG+LY P     A G+D E    G+ +     R+  A+  F  +   
Sbjct: 181 LTNFIRDVGEDLDRGRLYLPAGEFAAFGVDIEMLEHGRRTGTVDVRVKRALAHFIAVTRG 240

Query: 235 YLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               A   +  +   V P+      +  ++L   +   F+I+    +     R       
Sbjct: 241 RYRSAESGIPMLDRRVQPSIRTAFVLYGAILDQVERADFRILHRRVSVPGRTRLRVAAPG 300

Query: 294 SIK 296
            ++
Sbjct: 301 LVR 303


>gi|242018069|ref|XP_002429504.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212514446|gb|EEB16766.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 310

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 108/295 (36%), Gaps = 4/295 (1%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           + K  +      S    + +  +R +D+D YL  LL P   R +   +  F+ EL ++++
Sbjct: 19  MLKRAKNTSSNISSSLNYCIDLVRKLDHDNYLCSLLLPENLRATAFAIRAFNIELSKIQE 78

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                 T  MR+++W++               P   E+    +++ L   +F  ++    
Sbjct: 79  QTSQQYTGAMRVKFWEESLNQVYSDSP--PKHPVLQEIYLATKRHKLSKFHFKKLLTTRL 136

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
                 +  D    E YA +  S ++ L    ++ +       +  + G AQ +  LI  
Sbjct: 137 NQLNVSTFNDMADMESYADKTCSPVLMLLLEAINVKNLD-CDHIASHIGKAQGLSNLIRS 195

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMR 244
           LP ++    +  P   L    +  ES +    +   +S  I   A     +L  A     
Sbjct: 196 LPYNFKEKIVLLPRTELLKYSVSEESLMRNTVNPESLSQIIFEVATKANNHLNLASSLRE 255

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            I  +    F+P       L   +   F I   +      + P+++  + I+K F
Sbjct: 256 KIPVNCHSLFLPAVPVRIFLNKLEKANFYIYDPNLYKKNGLLPFFLFWNKIRKSF 310


>gi|297190553|ref|ZP_06907951.1| phytoene synthase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197717867|gb|EDY61775.1| phytoene synthase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 313

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 88/290 (30%), Gaps = 7/290 (2%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
           T+           +          +      L PP  R ++S LY F   +  + D    
Sbjct: 5   TQVPTAPVQAAYSYCEAVTGQQARNFAYGIRLLPPHKRQAMSALYAFSRRVDDIGDGTLK 64

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           P  +  RL+  +++ +   +G + E    P +V L    R++ LP     ++I+    D 
Sbjct: 65  PQAKQDRLEATRELLDRIRQGAVDEDDTDPVAVALCDAARRFPLPLGGLDELIDGVLMDV 124

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFIGQLIC 184
             ++       + Y   ++  +  L+  +  ++        +       G+A  +  ++ 
Sbjct: 125 RGETYETWDDLKAYCRCVAGAIGRLSLGVFGTQPGARGADRAAEYADTLGLALQLTNILR 184

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
            +      G+ Y P D L   G     +  +       +  +            +    +
Sbjct: 185 DIAEDASNGRTYLPADDLAKFGCSEGFNGTTPPPGSDFAGLVHFEVRRARALFAEGYRLL 244

Query: 244 RYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             +             I   +L   +     ++    +     + +  + 
Sbjct: 245 PMLDRRSGACVAAMAGIYRRLLDRIERDPDAVLRGRVSLPGREKAYVAVR 294


>gi|237815325|ref|ZP_04594323.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|237790162|gb|EEP64372.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 280

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 2/282 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
            KI +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  
Sbjct: 1   MKIMNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPG 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
            +RLQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +
Sbjct: 61  KVRLQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPM 118

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                 E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RG
Sbjct: 119 PSRNDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRG 178

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           Q+Y P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PA
Sbjct: 179 QVYVPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPA 238

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           F+P+++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 FLPMALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 280


>gi|86740089|ref|YP_480489.1| phytoene synthase [Frankia sp. CcI3]
 gi|86566951|gb|ABD10760.1| phytoene synthase [Frankia sp. CcI3]
          Length = 339

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 83/300 (27%), Gaps = 21/300 (7%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YLA LL P   R  +  LY F      + D   + +T   R
Sbjct: 20  LRSSYARARALNAAHGRTYYLATLLLPGWKRPHVHALYGFARYADEIVDDLDSTLTEAER 79

Query: 77  LQWWKDIFESSTK---------------GLIAESIS----PFSVELLSIVRQYDLPNQYF 117
            +W  +                                       ++  + ++ +   +F
Sbjct: 80  ARWLHEWGSRFLAALRAGTPAVDVGTEMAGTGRDRHRAEVSVLPAVVDTIHRFKIDPDHF 139

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQ 177
              + +   D          +   Y    ++ +      IL+    SA L   +  G+A 
Sbjct: 140 AAFLASMAMDLTVTEYATWDELTVYMHGSAAVIGLQMVPILEPVDDSA-LPYARDLGMAF 198

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +   I  +     RG++Y P   L   G+ RE   +G     +   +        +   
Sbjct: 199 QLANFIRDVGEDLRRGRVYLPRTSLDLFGVTREQLAAGVVDGPVRRLLAFEISRARELFR 258

Query: 238 KAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            A   +R + P           +   +L   +   ++++    +     R      + ++
Sbjct: 259 AAEPGIRLLHPTSRDCLRTAFVLYRGILDEVERADYRVLERRVSVGPPRRLAVAGPALVR 318


>gi|168698458|ref|ZP_02730735.1| Squalene/phytoene synthase [Gemmata obscuriglobus UQM 2246]
          Length = 313

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 102/294 (34%), Gaps = 7/294 (2%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           + +   +   +  R            +    LA  L  P  R +++ LY +      + D
Sbjct: 17  VPRGAPRTAPLIPRSFQACRAITAAANSSFPLAFRLLCPAKRRAMNALYAYMRVTDDLAD 76

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                  +  +L  W+   +++  G     + P    L   VR+YD+P QY  D I+   
Sbjct: 77  EDGAVEAKRAKLAAWRVSLKAALGGAFTHPVHP---ALAETVRRYDIPPQYLFDAIDGME 133

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER---YSASLRVIKYAGIAQFIGQL 182
            D     +    +   Y +R++S +      I        +S + +  +  GIA  +  +
Sbjct: 134 TDLGPVRMQTFSELYPYCYRVASAVGLACVRIWGIRPGVTFSDTDQPAEAVGIAFQLTNI 193

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           +  L   Y R ++Y P D L   G   E +    N+      ++       +Y  +    
Sbjct: 194 LRDLAEDYARERVYLPADELARSGCPPELWRDPGNAANFRAMMQAQVTRAREYYRRGAAL 253

Query: 243 MRYILPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +  +  + +    +  +   ++L   +  G+ + +      +  +     S  +
Sbjct: 254 LPLLSREGWAICHMMFNSYRALLDEIERRGYDVFTARVRVPKWRKVAAFGSGYL 307


>gi|153006917|ref|YP_001381242.1| squalene/phytoene synthase [Anaeromyxobacter sp. Fw109-5]
 gi|152030490|gb|ABS28258.1| Squalene/phytoene synthase [Anaeromyxobacter sp. Fw109-5]
          Length = 310

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 89/284 (31%), Gaps = 2/284 (0%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
           ++           LR      ++   L  P     ++ LY F        D      T D
Sbjct: 16  QLVHTGLAECWEILRVHGKTFHMMAKLLGPERGNDIAALYGFARVADDAVDVPAPGDTPD 75

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
                   +     + +  ES  P  V L   VR++ +P + F D++     D       
Sbjct: 76  DIRAKLARMQAELRRAVRGESAQPRFVALGETVRRHAIPLEPFDDLVAGLLMDLEGARYR 135

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                E Y +R++  +  + T +      + +L   K  G A  +  ++  +    + G+
Sbjct: 136 TFADLELYCYRVAGTVGLMITPVAGYREGTEALEHAKTLGTAMQLTNILRDVGEDLNLGR 195

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI-LPDVFPA 253
           +Y P + L   GL      + +   R    +            +    +  +       A
Sbjct: 196 VYLPEEDLALFGLADGHLAARRVDGRFKALMDFEIARARGLYERGLALIPLLADGRGRLA 255

Query: 254 FIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           F        ++L+  + + + +     + +   +   +  +  +
Sbjct: 256 FQFAVDAYSAILEKIRANRYDVFRRRASLSASEKLALVPGALWR 299


>gi|316935315|ref|YP_004110297.1| Phytoene synthase [Rhodopseudomonas palustris DX-1]
 gi|315603029|gb|ADU45564.1| Phytoene synthase [Rhodopseudomonas palustris DX-1]
          Length = 355

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 90/283 (31%), Gaps = 8/283 (2%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           + + +   D L     +++  +  + A L+ P         LY F        D   +  
Sbjct: 4   QSDMLAQSDMLACREMIKEGSHTFHAASLVLPRRISDPAIALYAFCRVADDAVDLGLDRA 63

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                L+   D               P       +V ++ +P      +IE   +D+   
Sbjct: 64  AAVEVLKDRLDR-----ACRGVPRAYPSDRAFADVVARFSIPPAIPEALIEGLEWDAQGR 118

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                 +   Y  R++  +  + T+++   +     R     G A  +  +   +     
Sbjct: 119 RFETLSELYSYCARVAGTVGVMMTLVMGQRKPDIVARACD-LGCAMQLTNIARDIGEDAR 177

Query: 192 RGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G++Y PL  +   GLD   +L+  + +  I+  +K   +       +A   +  +    
Sbjct: 178 NGRIYMPLSWMREAGLDPAKWLADPKFTPEIASIVKRLIDTADALYDRATLGIANLPRSC 237

Query: 251 FP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            P  F   ++   + +  +  G   VS     +   +   +  
Sbjct: 238 RPGIFAARALYAEIGREVERSGLDSVSSRAVVSTGRKLAVLAR 280


>gi|118087202|ref|XP_418344.2| PREDICTED: similar to putative phytoene synthase [Gallus gallus]
          Length = 324

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 4/290 (1%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
              +  IF ++ +  L   +  DY+ +L  LL P   R S   L  F+ EL +++D+   
Sbjct: 39  PELQHTIFQQNVVSYLEQ-KKRDYEGFLCSLLLPAESRTSAFALRAFNVELAQIKDSITQ 97

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
             T  MR+Q+W+   E            P +V L   V++++L   +F+ +I+    +  
Sbjct: 98  KTTGLMRMQFWRKAVEDIYCDNP--PHQPVAVALWRAVKRHNLSKMWFMKIIDEREKNLD 155

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           + +  + ++ E YA    S L +L   +L      A      + G AQ I   +   P H
Sbjct: 156 DRAYRNIQELETYAENTQSALFYLTLEMLGVRDVHA-DHAASHIGKAQGIVTCLRATPYH 214

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             R +++ P+DI    G+ +E F+  +    +   I   A     +L  AR   + +   
Sbjct: 215 CARRKVFLPMDICMLHGVSQEDFIRCKQEKHVRDVIYDIASQAHIHLEHARSFSKKVPVK 274

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +PAF      +  L + +   F I   S      + P Y+   + KK +
Sbjct: 275 AYPAFYYTVALDDYLYNIRKVDFNIFHPSLQKRNTLLPLYLYIRTWKKTY 324


>gi|257869000|ref|ZP_05648653.1| squalene desaturase [Enterococcus gallinarum EG2]
 gi|257803164|gb|EEV31986.1| squalene desaturase [Enterococcus gallinarum EG2]
          Length = 296

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 91/275 (33%), Gaps = 8/275 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           +  D  +  + ++      Y A    PP    S+  +Y F  +     D  ++     ++
Sbjct: 12  YKEDFAYCEQIIKKHSKSFYSAFSQLPPEKARSVFAVYAFCRQADDAIDRYQD----IVK 67

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L   +        G + +  +P    L  +  +YDL  Q F DM+     D         
Sbjct: 68  LNELEHGLRQMACGKVLD--TPLWRALSVVFAKYDLQFQPFYDMLAGQRMDLNFQPPETE 125

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y++ ++  +  +   IL S+         K  G A     ++  +       ++Y
Sbjct: 126 ADLSSYSYFVAGSVGLMLLPILSSQAGK-IQEPAKKLGEAMQRTNILRDIGEDLAMNRIY 184

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P + +    +  +     + ++      +  A L  K   +A   M  I  D   A + 
Sbjct: 185 LPKETMQRFEITIQHLRQKKVTESFIQLWEFEALLAEKLYDEALSMMPQIDEDCQEALMA 244

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +    +L   +   +++    +  +   + + +
Sbjct: 245 ALLIYRELLTVIREKNYQVFLKKNAVSIQRKAFLL 279


>gi|145596950|ref|YP_001161247.1| squalene/phytoene synthase [Salinispora tropica CNB-440]
 gi|145306287|gb|ABP56869.1| phytoene synthase [Salinispora tropica CNB-440]
          Length = 312

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 85/287 (29%), Gaps = 5/287 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +          R      YLA  L P   R  +  LY F      + D   +  +    
Sbjct: 5   LTAAYDRCRELHRHHGRTYYLATRLLPAWKRRHVHALYGFTRYADEIVDRTEDLPSAHRA 64

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
            Q                   P    +L  +  +DL    F   +++   D    S    
Sbjct: 65  AQLDDWAGRFIAGLHGEPVTDPLLPAVLHTIAVFDLDRDDFASFLKSMAMDLTISSYPTY 124

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
               HY    ++ +  +   IL S   +A+    +  G A  +   I  +     RG+ Y
Sbjct: 125 ADLLHYMEGSAAVIGTMMLPILGSANPAAAREPARQLGFAFQLTNFIRDVAEDLDRGRTY 184

Query: 197 FPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            P + L   G+ R+  L    +G+ S+ I   I+        +   A   +  + P    
Sbjct: 185 LPDEDLTRFGVTRDDLLAARAAGRTSEPIRELIRYEVARAQAHYAAAAPGVTLLAPASQA 244

Query: 253 AFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                 ++   +L       F + +      Q  R      + + + 
Sbjct: 245 CIRTAYTLYGGILDEVAEQDFDVFARRARVPQHHRMTETARALLTRT 291


>gi|229490377|ref|ZP_04384218.1| phytoene synthase [Rhodococcus erythropolis SK121]
 gi|229322667|gb|EEN88447.1| phytoene synthase [Rhodococcus erythropolis SK121]
          Length = 314

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 91/303 (30%), Gaps = 20/303 (6%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
                    F     R+     +LA  L P   R ++  LY F   +  V D    P  R
Sbjct: 1   MNALPASYEFCEDVTREHGRTYFLATRLLPEPRRRAVHALYAFARVVDDVVDEPSGPHER 60

Query: 74  DMRLQWWKD----IFESSTKGLIAESISP-----FSVELLSIVRQYDLPNQYFLDMIEAH 124
              L   +       ++ T      S  P             V+ +D+P  YF    E+ 
Sbjct: 61  GTVLADVERAAVTALDNPTATGGFPSTVPLDLTRVLPAFADAVKTFDIPRAYFDAFFESM 120

Query: 125 FFDSYND-----SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-RVIKYAGIAQF 178
             D+ +            +   Y +  +  +      IL                G A  
Sbjct: 121 RMDAPDTAKFRPVYDTMDELAEYMYGSAVVIGLQMLPILGVSVPQQEAVVPASNLGEAFQ 180

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSD----RISLAIKIFAELGLK 234
           +   I  +     RG+LY P     A G+D E    G+ ++    R+  A+  F  +   
Sbjct: 181 LTNFIRDVGEDLDRGRLYLPAGEFAAFGVDIEMLEHGRRTETVDVRVKRALAHFIAVTRG 240

Query: 235 YLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               A   +  +   V P+      +  ++L   +   F+I+    +     R       
Sbjct: 241 RYRTAESGIPMLDRRVQPSIRTAFVLYGAILDQVERADFRILHRRVSVPGRTRLRVAAPG 300

Query: 294 SIK 296
            ++
Sbjct: 301 LVR 303


>gi|146340961|ref|YP_001206009.1| putative phytoene synthase [Bradyrhizobium sp. ORS278]
 gi|146193767|emb|CAL77784.1| putative phytoene synthase (terpenoid synthase) [Bradyrhizobium sp.
           ORS278]
          Length = 284

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 7/287 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E   S D+ F    +R+ D+DRY + L   P  R +L  L+ F+ E+ R+RD    P+ 
Sbjct: 2   SEPSASSDAAFCAGLVREHDFDRYASTLFVAPEIRRALLSLFAFNIEISRIRDVVSQPLP 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            ++RLQWW D              +P + ELLS V+++ LP      +I+ H FD YND 
Sbjct: 62  GEVRLQWWHDALSGQAH--GGIEGNPVAAELLSTVQRFALPVARLTRLIDEHQFDLYNDP 119

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
           +      + Y       +  LA  I+      A   +  +AGIA  + Q+I  LP     
Sbjct: 120 MPTMAALDGYLGDTCGTMFALAAQIMAPPFEGA-DHLAHHAGIALGLLQVIASLPRDAAH 178

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            QLY PLD+L   G+ +E   +G+ +  I   +        ++L    +  R   P   P
Sbjct: 179 RQLYVPLDLLERHGVPQEEVFAGKATPAIRALLADLRAQAQQHLDHTLQLSREAPPAARP 238

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           A +P+++    L                 ++L   W +  ++    F
Sbjct: 239 ALLPLALVRRDL---AREAGDPFLPQPR-SRLATLWTLWRAARTGSF 281


>gi|85716181|ref|ZP_01047156.1| squalene/phytoene synthase [Nitrobacter sp. Nb-311A]
 gi|85697014|gb|EAQ34897.1| squalene/phytoene synthase [Nitrobacter sp. Nb-311A]
          Length = 295

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 5/282 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +  + F    +R  D+  Y   L +P  +R +L  LY F+ E++R+R+    P+  ++RL
Sbjct: 17  NTSAAFCAELVRTHDFANYATTLFAPLRFRRALLALYAFNVEIVRIREQITQPLPGEIRL 76

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           QWW D+ +    G      +P + ELL  ++++ LP +    +IEAH FD YND + D  
Sbjct: 77  QWWIDMIDG--AGRGGVEGNPVAAELLLAIQEHGLPVELLSRLIEAHQFDLYNDPMPDMA 134

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
            FE Y    S  L  LA+ ++          + ++AG+A  I Q I +      R Q Y 
Sbjct: 135 AFERYLGDTSCALFSLASRVVGQRSEET-DHLARHAGLAAGIAQTIAKFGFDASRRQSYV 193

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           PL +L     D E   +GQ++  +  AI   A+    +L  A   +  + P     ++P+
Sbjct: 194 PLQLLEQHSADLEQVFAGQDTSSVRAAIGGLADEARSHLEVAFGLLPDLPPQSRGVYLPL 253

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++    L    +            ++L   W M  +S  + F
Sbjct: 254 ALVRRALNA-GDTDINPFVPRP-VSRLRILWTMWRASRTRPF 293


>gi|92117347|ref|YP_577076.1| squalene/phytoene synthase [Nitrobacter hamburgensis X14]
 gi|91800241|gb|ABE62616.1| Squalene/phytoene synthase [Nitrobacter hamburgensis X14]
          Length = 287

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 4/282 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +  + F    +R+ D++ Y   LL+P   R +L  LY F+ E++RVR+    P+  ++RL
Sbjct: 8   NSSAAFCADLVRNHDFENYATTLLAPLRCRRALLALYAFNVEIVRVREQITQPLPGEIRL 67

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           QWW D+      G      +P + ELL  +R + LP +    +IEAH FD YND + D  
Sbjct: 68  QWWLDVL--VGAGHGGVEGNPVAAELLLAIRDHGLPVERLSRLIEAHQFDLYNDPMPDLA 125

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             E Y F  S  L   A+ I+  +       + ++AG+A+ I Q+I  L     R Q Y 
Sbjct: 126 ALEQYLFDTSCALFSFASCIVGHQSDKT-DHLARHAGLARGIAQVIAMLGFDASRRQSYV 184

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           PL ++   G   E   +G+++  +  A+   A+    +L  A   +  + P+    ++P+
Sbjct: 185 PLQLMEQHGSALEQVFAGRDTPPLRAALSGLADEARSHLDAALALLPELPPESRTVYLPL 244

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++    LK                ++L   W +  +S    F
Sbjct: 245 ALVRPALKRMAQANVDPFVPQAA-SRLHILWTLWRASRTTMF 285


>gi|8574392|emb|CAB94795.1| phytoene synthase [Mycobacterium aurum]
          Length = 314

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 86/293 (29%), Gaps = 11/293 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN--PITRD 74
                              +LA  L  P  R ++  LY F      V D   +     R 
Sbjct: 16  LRAAYQRCRALNAAHGKTFFLATRLLSPRQRPAVHALYGFARRADDVLDEFDDRTTDERA 75

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             LQ   D   +           P    ++   R Y L    F D + +   D       
Sbjct: 76  AELQLLADALFARLVQNRLAGDDPVLDAVVDTARNYQLDWHLFDDFLASMRMDLSITDYP 135

Query: 135 DCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
           D    + Y +  +  +   +  ++        +       G A  +   +  +     RG
Sbjct: 136 DRAALDRYMYGSAEVIGLQMLPVLGTVVPREEAAPHAAALGKAFQLTNFLRDIDEDLTRG 195

Query: 194 QLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           ++Y P D L A G+DRE  L      +   R+  A+             A   +  + P 
Sbjct: 196 RVYLPADELAAHGVDRELLLWCQRHRRTDPRLRSALIEQHARTRTIYAHAELGIPMLHPH 255

Query: 250 VFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS---SSIKKR 298
             P       +   +L   +   +++ S   T + + R         +S + R
Sbjct: 256 SRPCIRAALTLYSEILDRIEEINYEVFSERATVSNVRRLQVASRGLVNSWRAR 308


>gi|326490864|dbj|BAJ90099.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 263

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 86/261 (32%), Gaps = 9/261 (3%)

Query: 42  SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSV 101
             P  R ++  +Y +      + D           L  W+   E   +         +  
Sbjct: 1   MTPERRKAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLEDLFE---GRPYDMYDA 57

Query: 102 ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE 161
            L     ++ +  Q F DMIE    D +        +   Y + ++  +  +   ++   
Sbjct: 58  ALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYLYCYYVAGTVGLMTVPVMGIA 117

Query: 162 RY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQ 216
                   +        GIA  +  ++  +     RG++Y PLD L   GL  E    G+
Sbjct: 118 PDSKASAESVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGK 177

Query: 217 NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIV 275
            +D+    +K   +    +  +A + + ++      P    + +   +L   + + +   
Sbjct: 178 VTDKWRRFMKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNF 237

Query: 276 SHSHTPNQLVRPWYMLSSSIK 296
           +      +  +   + ++  +
Sbjct: 238 TKRAYVGKAKKFLSLPAAYAR 258


>gi|76803015|ref|YP_331110.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
           synthase) [Natronomonas pharaonis DSM 2160]
 gi|76558880|emb|CAI50476.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
           synthase) [Natronomonas pharaonis DSM 2160]
          Length = 318

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 96/273 (35%), Gaps = 5/273 (1%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R+     Y A  L P   R     LY F      V D        + R +       +  
Sbjct: 15  RETGKTFYYATRLLPERVRHPTYVLYAFFRLADEVVDDPGALSPDEQRQELLDIREAALG 74

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +    E   P       + R++D+P++     I+A   D         ++ E Y    +S
Sbjct: 75  RT---EPDDPVLEAFSEVRRRHDIPDEEVEVFIDAMLTDIEKSRYETYEELEAYMQGSAS 131

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGL 207
            +  + TM++ +E   A++   +  G A  +   +  +      R ++Y P + L A  +
Sbjct: 132 AVGVMMTMLMGTEDTDAAVPRARALGEAFQLTNFLRDIGEDIEERNRIYLPQETLDAYDV 191

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKH 266
           D     + + +D +  AI+   E   +   +    ++Y+  D   P      +     + 
Sbjct: 192 DPADIEAHRFTDELGDAIEHELERAERRYREGVAGIKYLPVDCQLPVLTAAVLYADHHRL 251

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            ++H    V+ + +   L +   +  +     +
Sbjct: 252 IRDHDLDTVTQTPSLGTLRKLALVARTRWHWAW 284


>gi|86751118|ref|YP_487614.1| squalene/phytoene synthase [Rhodopseudomonas palustris HaA2]
 gi|86574146|gb|ABD08703.1| phytoene synthase [Rhodopseudomonas palustris HaA2]
          Length = 349

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 87/279 (31%), Gaps = 8/279 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
               D L     +++     + A ++ P         LY F        D   +      
Sbjct: 2   TVHSDMLACREMIKEGSRTFHAASMVLPRRISDPAIALYAFCRVADDAVDLGLDRTAAVE 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L+   D               P       ++ ++ +P      +IE   +DS       
Sbjct: 62  VLKDRLDR-----ACRGLPRPYPSDRAFADVIARFSIPPAIPEALIEGLEWDSQGRRFET 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 YA R++  +  + T+++   R     R     G A  +  +   +      G++
Sbjct: 117 LSDLYGYAARVAGTVGVMMTLVMGQRRPDIVARACD-LGCAMQLTNIARDIGEDARNGRI 175

Query: 196 YFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-A 253
           Y PL  +   GLD E++L   + +  I+  +K   +       +A   +  +     P  
Sbjct: 176 YMPLSWMREAGLDPETWLKDPKFTPEIAGIVKRLIDTADALYDRATLGIANLPRSCRPGI 235

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           F   ++   + +  +  G   VS     +   +   +  
Sbjct: 236 FAARALYAEIGREVERSGLDSVSSRAVVSTGRKLAVLAR 274


>gi|330465078|ref|YP_004402821.1| squalene/phytoene synthase [Verrucosispora maris AB-18-032]
 gi|328808049|gb|AEB42221.1| squalene/phytoene synthase [Verrucosispora maris AB-18-032]
          Length = 303

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 88/286 (30%), Gaps = 9/286 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--TARNPITRD 74
            +          R      YLA  L P   R  +  LY F      + D   A     R 
Sbjct: 5   LAAAYERCRDLHRQHGRTYYLATRLLPAWKRRHVHALYGFTRYADEIVDRTEALPSAERA 64

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W   F +   G   +   P    +L  +  +DL  + F   +++   D    S  
Sbjct: 65  ALLDDWGGRFVAGLHGEPVD--DPLLPAVLHTIAVFDLDREDFASFLKSMAMDLTVTSYR 122

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
             +    Y    ++ +  +   IL S    A+    +  G A  +   I  +     RG+
Sbjct: 123 TYEHLLDYMEGSAAVIGTMMLPILGSSNLLAAREPARQLGFAFQLTNFIRDVAEDLDRGR 182

Query: 195 LYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            Y P + L   G+ R+  L    +G+ ++ +   I+        +   A   +  +    
Sbjct: 183 TYLPDEDLAEFGVTRDDLLACRAAGRATEPVRELIRYEVTRAQAHYAAAAPGVVLLDAGS 242

Query: 251 FPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                    +   +L       + + +   T  Q  R      + +
Sbjct: 243 QSCIRTAYLLYGGILDEVAAQDYDVFAKRATVPQRRRMTVAARALL 288


>gi|157120336|ref|XP_001653613.1| hypothetical protein AaeL_AAEL008945 [Aedes aegypti]
 gi|108874994|gb|EAT39219.1| conserved hypothetical protein [Aedes aegypti]
          Length = 311

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/314 (21%), Positives = 114/314 (36%), Gaps = 18/314 (5%)

Query: 1   MVLKFLTKNTRKEEKIF------------SRDSLFVLRNLRDIDYDRYLACLLSPPLYRI 48
           M  +  T N R  + I             +    + +  +R  D + +L  LL     R 
Sbjct: 1   MYNRLCTVNQRLTQAILFIRHASNAAKDSTLAQNYCMNLVRQYDKENFLCTLLLKNPERR 60

Query: 49  SLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAE-SISPFSVELLSIV 107
           S   +  F+ E+ R+  T  +     MRL++W+D  +   K  +      P   EL +++
Sbjct: 61  SALAIRAFNVEIARITGTVSDDKIGQMRLKFWEDTIDKLFKNDLKHVPEQPVIQELKNVI 120

Query: 108 R-QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
             Q  L  +YF  +I A    +        KQ E YA      +++L           A 
Sbjct: 121 DGQNKLTKRYFQRLISARLNANLR--FVTTKQMEEYAENSVCSVLYLLLEAHGVRNVHA- 177

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQ-NSDRISLAI 225
                + G AQ I  L+  +P    R  +  P ++L   G+ +E  L  +     +   I
Sbjct: 178 DHAASHLGKAQGIVNLLRSIPYQERRNVVPVPQEVLMQHGVSQERVLRNRKEDKGVEEVI 237

Query: 226 KIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
              A L  ++L KAR+    I     P  +P   T   L+  +   F I          +
Sbjct: 238 FQLAGLAHQHLEKARKLAASIPKQAKPVLLPGVATGRYLERLRKANFHITDSRLLQKDAM 297

Query: 286 RPWYMLSSSIKKRF 299
            P  +  +  + +F
Sbjct: 298 LPLVIYWNHFRGKF 311


>gi|254718997|ref|ZP_05180808.1| Phytoene synthase [Brucella sp. 83/13]
 gi|306840116|ref|ZP_07472902.1| Phytoene synthase [Brucella sp. NF 2653]
 gi|306404844|gb|EFM61137.1| Phytoene synthase [Brucella sp. NF 2653]
          Length = 277

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +   +  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGSLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS +++     A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDTSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|256377876|ref|YP_003101536.1| squalene/phytoene synthase [Actinosynnema mirum DSM 43827]
 gi|255922179|gb|ACU37690.1| Squalene/phytoene synthase [Actinosynnema mirum DSM 43827]
          Length = 310

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 92/290 (31%), Gaps = 7/290 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           + +             +     YLA  L     R ++  LY F      V D   +  T 
Sbjct: 14  DPLLRDAYRRCRELNAEHGRTYYLATRLLQREQRPAVHALYGFARWADDVVDEVHDGRTA 73

Query: 74  DMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             R     ++  + T G     S  P    ++   R+YD+   +F D + +   D     
Sbjct: 74  RERAAGLSEVDRALTAGLDAGRSEHPVVAAVVDTARRYDIDRAHFTDFLRSMRMDLTVAD 133

Query: 133 IFDCKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                    Y    ++ +      ++      + +       G+A  +   +  +     
Sbjct: 134 YATYDDLAEYVHGSAAVIGLQVLPVLGTVVPRAEAEPAAAALGVAFQLTNFLRDVGEDLD 193

Query: 192 RGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           RG++Y PLD L A G+DRE         +   R+  A+            +A   +  + 
Sbjct: 194 RGRVYLPLDELAAFGVDRELLEWARRRDRTDPRVRKALAHQVARARSVYRRAEPGIAMLA 253

Query: 248 PDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           P   P       +   +L   ++  + ++S     +   R    L +  K
Sbjct: 254 PRSRPCVATAYRLYGRILDLIEDADYDVLSRRVVVSTGRRLAIALPALAK 303


>gi|225872472|ref|YP_002753927.1| phytoene synthase-related protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225791926|gb|ACO32016.1| phytoene synthase-related protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 312

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 84/277 (30%), Gaps = 5/277 (1%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
              E    +    +  R       + ++A    P   R     +Y +      + D   N
Sbjct: 22  MPAETPTLAEARAYCRRLTESHYENFHVASWFLPKRLRPHFHSIYAYCRISDDLGDEVGN 81

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                  L  W +  ++  +    E+  P  V L   VR  ++P + F D++ A   D  
Sbjct: 82  AEQSLALLDLWGEQLDACYR---GEARHPVFVALAETVRACEIPKEPFADLLVAFRQDQT 138

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                  ++   Y    ++ +  L               +  Y   A  +      + + 
Sbjct: 139 VTRFRTMEEIHGYCRYSANPVGRLVLYTCGYRDEERFA-LSDYTCTALQLANFWQDVAVD 197

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           Y +G++Y P D +   G+      +G+ +      ++       K   K       +  +
Sbjct: 198 YKKGRIYLPQDDMERYGVTEAMIAAGEATPEFRELLRYEVGYAHKLFGKGEPLTGMVDAE 257

Query: 250 -VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                 +       +L+  +  G+ ++    +  +  
Sbjct: 258 LALDLDLFTRGGLEILRAIEAQGYDVLRARPSIPRSR 294


>gi|163760427|ref|ZP_02167509.1| Squalene/phytoene synthase [Hoeflea phototrophica DFL-43]
 gi|162282378|gb|EDQ32667.1| Squalene/phytoene synthase [Hoeflea phototrophica DFL-43]
          Length = 346

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 100/273 (36%), Gaps = 8/273 (2%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
               +R        A +L P   R++   LY F      + D + +P      L   +  
Sbjct: 19  CEEAIRAGSKSFLAASMLLPGSTRMAARALYAFCRATDDLVDESADPAEG---LAEIRAR 75

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            ++  +G       P     +++V  Y LP      ++E   +D  N +  DC +   Y+
Sbjct: 76  LDAIYRGTP--RDHPADRAFVAVVEHYALPRALPDALVEGFEWDVGNRTYRDCNELCAYS 133

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R++S +  + T+I+      A L      G+A  +  +   +     RG++Y PLD L 
Sbjct: 134 ARVASTVGVMMTLIMGV-CDRAVLARAADLGLAMQLTNIARDVGEDARRGRIYLPLDWLE 192

Query: 204 AVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TE 261
             G+DRE+FL + +    +    +           +A   +  +      A    ++   
Sbjct: 193 EAGIDREAFLANPEACPAMRATTERLLNTAQSLYARAMTGIAGLPLTCRMAIRSAALIYR 252

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            + +  +  G   ++     +   +   +  ++
Sbjct: 253 EIGREIEKSGHDSITLRAHTSTRRKLELIAQAA 285


>gi|148558928|ref|YP_001258872.1| hypothetical protein BOV_0889 [Brucella ovis ATCC 25840]
 gi|148370185|gb|ABQ60164.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 277

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L ++G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKSIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|94968773|ref|YP_590821.1| farnesyl-diphosphate farnesyltransferase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550823|gb|ABF40747.1| farnesyl-diphosphate farnesyltransferase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 316

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 104/317 (32%), Gaps = 28/317 (8%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           ++   ++     S          R    + Y A L+ P   R +L  +Y F      + D
Sbjct: 1   MSAEKKQHPLQLSTAYAVCRHITRSQAKNFYYAFLVLPRRKRNALCAVYAFMRHADDISD 60

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAES-ISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
                I   +R +    + ++  + +  E    P  + L    + Y++P ++   ++   
Sbjct: 61  D--EAIPVLVRREKLSTLLDNFHRAIAGEPTDDPVLIALAHTQKTYEVPMEWLDKLVFGT 118

Query: 125 FFDSYND-----------------------SIFDCKQFEHYAFRISSRLIHLATMILDSE 161
             D ++D                       +         Y + ++S +  +   I    
Sbjct: 119 MMDLHDDTPAVTESVAAEGGSTAVLTKRILTFPTFDDLYAYCYHVASVVGLVCIKIFGYR 178

Query: 162 RYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
              A     +  GIA  +  +I  +       ++Y P   L   G+  E+  +    +++
Sbjct: 179 DPKAEKLAERT-GIAFQLTNIIRDVKEDAAMSRVYLPERDLQTFGITPEAVAAWPTLEQL 237

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHT 280
              +++  E  + Y   A+E +  I  D  PA   +  I   +++      + + +    
Sbjct: 238 QPVLQLEGERAMGYYQSAQELVGLIDDDSQPALWALVEIYRQLMEKIAAKKYDVFTDRVR 297

Query: 281 PNQLVRPWYMLSSSIKK 297
                +   +    +++
Sbjct: 298 LTTGEKLKIVAKGLVRR 314


>gi|17987357|ref|NP_539991.1| phytoene synthase [Brucella melitensis bv. 1 str. 16M]
 gi|23501779|ref|NP_697906.1| hypothetical protein BR0893 [Brucella suis 1330]
 gi|161618853|ref|YP_001592740.1| phytoene synthase [Brucella canis ATCC 23365]
 gi|163843165|ref|YP_001627569.1| phytoene synthase [Brucella suis ATCC 23445]
 gi|225852406|ref|YP_002732639.1| phytoene synthase [Brucella melitensis ATCC 23457]
 gi|254701657|ref|ZP_05163485.1| Phytoene synthase [Brucella suis bv. 5 str. 513]
 gi|254713996|ref|ZP_05175807.1| Phytoene synthase [Brucella ceti M644/93/1]
 gi|254716945|ref|ZP_05178756.1| Phytoene synthase [Brucella ceti M13/05/1]
 gi|256031489|ref|ZP_05445103.1| Phytoene synthase [Brucella pinnipedialis M292/94/1]
 gi|256044567|ref|ZP_05447471.1| Phytoene synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061000|ref|ZP_05451157.1| Phytoene synthase [Brucella neotomae 5K33]
 gi|256159615|ref|ZP_05457377.1| Phytoene synthase [Brucella ceti M490/95/1]
 gi|256254895|ref|ZP_05460431.1| Phytoene synthase [Brucella ceti B1/94]
 gi|256264097|ref|ZP_05466629.1| phytoene synthase [Brucella melitensis bv. 2 str. 63/9]
 gi|260168623|ref|ZP_05755434.1| Phytoene synthase [Brucella sp. F5/99]
 gi|260563919|ref|ZP_05834405.1| phytoene synthase [Brucella melitensis bv. 1 str. 16M]
 gi|260566550|ref|ZP_05837020.1| phytoene synthase [Brucella suis bv. 4 str. 40]
 gi|261218750|ref|ZP_05933031.1| phytoene synthase [Brucella ceti M13/05/1]
 gi|261222078|ref|ZP_05936359.1| phytoene synthase [Brucella ceti B1/94]
 gi|261321751|ref|ZP_05960948.1| phytoene synthase [Brucella ceti M644/93/1]
 gi|261325000|ref|ZP_05964197.1| phytoene synthase [Brucella neotomae 5K33]
 gi|261752211|ref|ZP_05995920.1| phytoene synthase [Brucella suis bv. 5 str. 513]
 gi|261758097|ref|ZP_06001806.1| phytoene synthase [Brucella sp. F5/99]
 gi|265988578|ref|ZP_06101135.1| phytoene synthase [Brucella pinnipedialis M292/94/1]
 gi|265990992|ref|ZP_06103549.1| phytoene synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265998043|ref|ZP_06110600.1| phytoene synthase [Brucella ceti M490/95/1]
 gi|17983042|gb|AAL52255.1| phytoene synthase [Brucella melitensis bv. 1 str. 16M]
 gi|23347709|gb|AAN29821.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161335664|gb|ABX61969.1| Phytoene synthase [Brucella canis ATCC 23365]
 gi|163673888|gb|ABY37999.1| Phytoene synthase [Brucella suis ATCC 23445]
 gi|225640771|gb|ACO00685.1| Phytoene synthase [Brucella melitensis ATCC 23457]
 gi|260153935|gb|EEW89027.1| phytoene synthase [Brucella melitensis bv. 1 str. 16M]
 gi|260156068|gb|EEW91148.1| phytoene synthase [Brucella suis bv. 4 str. 40]
 gi|260920662|gb|EEX87315.1| phytoene synthase [Brucella ceti B1/94]
 gi|260923839|gb|EEX90407.1| phytoene synthase [Brucella ceti M13/05/1]
 gi|261294441|gb|EEX97937.1| phytoene synthase [Brucella ceti M644/93/1]
 gi|261300980|gb|EEY04477.1| phytoene synthase [Brucella neotomae 5K33]
 gi|261738081|gb|EEY26077.1| phytoene synthase [Brucella sp. F5/99]
 gi|261741964|gb|EEY29890.1| phytoene synthase [Brucella suis bv. 5 str. 513]
 gi|262552511|gb|EEZ08501.1| phytoene synthase [Brucella ceti M490/95/1]
 gi|263001776|gb|EEZ14351.1| phytoene synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094299|gb|EEZ18160.1| phytoene synthase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660775|gb|EEZ31036.1| phytoene synthase [Brucella pinnipedialis M292/94/1]
          Length = 277

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 82/279 (29%), Positives = 139/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|306843792|ref|ZP_07476390.1| Phytoene synthase [Brucella sp. BO1]
 gi|306275870|gb|EFM57586.1| Phytoene synthase [Brucella sp. BO1]
          Length = 277

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 82/279 (29%), Positives = 139/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAESAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|187250449|ref|YP_001874931.1| squalene synthase [Elusimicrobium minutum Pei191]
 gi|186970609|gb|ACC97594.1| Squalene synthase [Elusimicrobium minutum Pei191]
          Length = 268

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 98/266 (36%), Gaps = 9/266 (3%)

Query: 33  YDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
              +  A L      + +LS +Y F   +  + D           L +WK   +S     
Sbjct: 10  KSNFGSAFLFLSKEKKEALSVIYAFCRIVDDIVDEQHP--NAQDELDFWKKELDSVFS-- 65

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
            A   +    +L   V  ++L  + FL +IE    D +  S     + + Y +R++  + 
Sbjct: 66  AATPQTKLGKDLQKQVPLFNLTKKNFLLLIEGMEMDLHQRSYKTFDELKEYFYRVAGVVG 125

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
            +   +  ++   A        G A  +  +I  +      G++Y P + L    +  + 
Sbjct: 126 LMCCEVFGAKGDDA-RNYAITLGNAVQMTNIIRDIYEDAEIGRIYIPSEDLQKFDITPKD 184

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNH 270
             + +   R++  +K+  E   +    A+E           PA I  ++ E++L      
Sbjct: 185 IKN-KCMARLAPLLKMEGEKAKQLFKTAKESFPSEYKSALKPAVIMGAVYEAILDKIAAK 243

Query: 271 GFKIVSHSHTPNQLVRPWYMLSSSIK 296
            +K  +     ++L +   +L + IK
Sbjct: 244 KYK-FNKKVRLSKLKKISVLLKALIK 268


>gi|322784931|gb|EFZ11702.1| hypothetical protein SINV_04258 [Solenopsis invicta]
          Length = 303

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/294 (20%), Positives = 116/294 (39%), Gaps = 7/294 (2%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           L+ +  +  K+++  +   ++  + +R  DY+ +L  LL P   + +   +  F+ E+ +
Sbjct: 15  LRRMNTSGAKQKQTPN---VYCSQLVRKCDYENFLCTLLLPHSIKSAAFAIRAFNVEVAQ 71

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           V D   +     MRL +W D    +         SP ++EL  I++ + L  +YF  +IE
Sbjct: 72  VEDQVSDTRIGAMRLHFWMDALNETYDDNP--PRSPVALELYRILQWHKLSKRYFKRLIE 129

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQL 182
           A        +  D +  E Y    +S + +L      +   +A      + G A  +  L
Sbjct: 130 ARLNKLSGSTFVDLESLERYCDYTTSSIYYLLLEAQGTASLNA-DHAASHFGKAHGLVTL 188

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           I  +P +  +  +  P DIL    +  ES   GQ+S     A+   A    ++L  A   
Sbjct: 189 IRSVPYNARKRAMVLPQDILMKNNVSFESIFQGQSSAGFKDAVLEVASCAKQHLKMATSL 248

Query: 243 MRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPW-YMLSSSI 295
            +    D+   F+P    E+ L+  +   F +   +        P   +     
Sbjct: 249 RKTAGKDLNVIFLPTVCVENYLEELRKVDFDVFHPTLQRRNGFLPLQLLWRKMW 302


>gi|126438018|ref|YP_001073709.1| phytoene synthase [Mycobacterium sp. JLS]
 gi|126237818|gb|ABO01219.1| phytoene synthase [Mycobacterium sp. JLS]
          Length = 316

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 90/297 (30%), Gaps = 12/297 (4%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +               +     YLA  L  P  R ++  LY F      + D   +  T 
Sbjct: 13  DPALRNAYRCCRVLNAEHGRTFYLATRLLAPEQRPAVHALYGFARRADDILDDLDSAATT 72

Query: 74  DMRLQWWKDIFESSTK---GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
             R      +            A    P    ++   R+Y +P + F D + +   D   
Sbjct: 73  AERADRLHRLATQLFDGLVQGNATGGDPALAAVVHTARRYGIPWELFDDFLASMRMDLTV 132

Query: 131 DSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
               D    + Y +  +  +   L  ++        +       G A  +   +  +   
Sbjct: 133 TDYPDRASIDRYMYGSAEVIGLQLLPVLGTVVPREEAAPYAAALGKAFQLTNFLRDVDED 192

Query: 190 YHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             RG++Y P D L A G+DR+  +    + +   R+  A+     +  +    AR  +  
Sbjct: 193 LDRGRVYLPADELAAHGVDRDLLMWCHTTKRTDTRVRNALAEQHAVTRRVYDYARHGVDL 252

Query: 246 ILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM---LSSSIKKR 298
           + P           +   +L   +   F I +   T     R       L  + + R
Sbjct: 253 LHPRSRACVGAAAVLYSEILDRIEAIDFDIFNQRATVGNGRRLQVAGAGLLRAWRAR 309


>gi|258512402|ref|YP_003185836.1| Phytoene synthase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479128|gb|ACV59447.1| Phytoene synthase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 289

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 3/284 (1%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             +    +  R  R+     Y    + PP  R ++  +Y +        D          
Sbjct: 2   NLALAYEYCARRTREAGSSFYYGMRMLPPAKRRAMYAIYAWSRLCDDAVDD-HTGADAAS 60

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L   + I++++       S  P  + L   VR+Y +P + F  +I     D     +  
Sbjct: 61  HLATAERIYQAAYADDYLASSHPVVLALGDAVRRYGIPQEPFAHLIRGMRVDMAPVRLKS 120

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
               + Y   ++  +  +   I       A L + +  G A  I  ++  L     R ++
Sbjct: 121 QADLDAYCDDVAGTVGLMCVHIFGFRDPRA-LDLARDMGRALQITNILRDLAEDLARDRV 179

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P + +   G         + +      ++  AE    Y  +A E    + PD      
Sbjct: 180 YLPEEEMERFGYSLADLAERRMTPAFFALMRAQAERAKAYYARAAELFSLVEPDSLRCLS 239

Query: 256 PV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +  +   +L   +  GF++     + +   +   +      KR
Sbjct: 240 MLYVMYRRLLDKIEARGFRVFDERISLSGSQKLRLVWGVLWNKR 283


>gi|332017163|gb|EGI57962.1| UPF0551 protein C8orf38-like protein, mitochondrial [Acromyrmex
           echinatior]
          Length = 286

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 60/292 (20%), Positives = 117/292 (40%), Gaps = 7/292 (2%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           +   + ++++  +    + L+ +R  DY+ +L  LL P   + +   +  F+ E+ +V D
Sbjct: 1   MNTTSARQKQTPTE---YCLQLVRKSDYENFLCTLLLPHSIKSTAFAVRAFNVEVAQVED 57

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
              +     MRLQ+W D       G   +S  P ++EL  I++Q+ L  +YF  +I+A  
Sbjct: 58  QVSDSKIGAMRLQFWTDALNRIYNGNPPKS--PVALELHRILQQHKLSKRYFKRLIDARL 115

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
               +    D +  E Y    +S + +L          +A      + G A  +  LI  
Sbjct: 116 SKLSSSIFMDLESLERYCDYTTSSIYYLLLEAQGIASINA-DHAASHFGKAHGLVTLIRS 174

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           +P +  +  +  P D+L    +  ES   GQ+S     AI   A    ++L       + 
Sbjct: 175 VPYNARKRVIILPQDVLLKHSISSESIFQGQSSAGFKDAILEIASCAKQHLKVVTSLRKT 234

Query: 246 ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPW-YMLSSSIK 296
              ++   F+P    E+ L+  +N  F +   +      + P   +      
Sbjct: 235 TGKNLNVIFLPTVCVENYLEELKNVDFDVFHPTLQRRNGILPLQLLWRKMWS 286


>gi|284991731|ref|YP_003410285.1| Phytoene synthase [Geodermatophilus obscurus DSM 43160]
 gi|284064976|gb|ADB75914.1| Phytoene synthase [Geodermatophilus obscurus DSM 43160]
          Length = 317

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 91/297 (30%), Gaps = 8/297 (2%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           M L    +   + + +             +     +LA  L  P  R ++  LY      
Sbjct: 1   MTLVEPPRTQAERQALLDAAYRHCAAINAEHGKSYHLATRLLTPERRPAVHALYAAARTA 60

Query: 61  MRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDM 120
             + D      + D  L  W        +     S  P  +  +   R+Y +P ++ +D 
Sbjct: 61  DDLVDHPGADPSGD--LADWSRAL--LAELEAGWSDDPVRLATVHTYRRYAIPVEHLVDF 116

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER---YSASLRVIKYAGIAQ 177
           + A   D       D    + Y +  +S +      +L +        +       G A 
Sbjct: 117 LAAMTSDLTVTGYADMDALDRYMWGSASVIGLQVLPVLGTAPGVAREEAAPHAIALGEAF 176

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +   +  +     RG++Y P D++ A G+ RE   + +        ++    +  +   
Sbjct: 177 QLTNFLRDVAEDVDRGRVYLPADVMAAHGVTREQLEAKRYDGNFRELMREMVAIVRRRYD 236

Query: 238 KAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            A      + P+          +   +L   +   ++++      +Q  R       
Sbjct: 237 DAAPGTPMLAPESRDCVRAATDLYGGILTEIERADYRVLDRRVRVSQPRRLAVFARR 293


>gi|254709995|ref|ZP_05171806.1| Phytoene synthase [Brucella pinnipedialis B2/94]
 gi|261317544|ref|ZP_05956741.1| phytoene synthase [Brucella pinnipedialis B2/94]
 gi|261296767|gb|EEY00264.1| phytoene synthase [Brucella pinnipedialis B2/94]
          Length = 277

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS  +      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSGDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|257056625|ref|YP_003134457.1| phytoene synthase [Saccharomonospora viridis DSM 43017]
 gi|256586497|gb|ACU97630.1| phytoene synthase [Saccharomonospora viridis DSM 43017]
          Length = 321

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 90/296 (30%), Gaps = 13/296 (4%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPIT 72
           +    +  L       +     +LA  L     R ++  LY F      + D    +   
Sbjct: 13  DPALRKAYLRCRALNAEHGRTYFLATRLLALTQRPAVHALYGFARWADDIVDEPGADRAE 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL+                S  P    L+   R+YD+    F D + +   D     
Sbjct: 73  AARRLETLSREL--LRGLTDGSSGHPVLAALVHTARRYDIDTTLFTDFLRSMRMDLTVHD 130

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYH 191
             +    + Y    +  +      +L +   +          G A  +   +  +    +
Sbjct: 131 YPNRAALDDYVHGSAEVIGLQLLPVLGTVCPATHAEPYAAALGKAFQLTNFLRDVAEDVN 190

Query: 192 RGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           RG++Y P D L   G+DRE        G+   R+  A+     +       AR  +  + 
Sbjct: 191 RGRVYLPADELAVHGVDRELLEWCTSRGRTDPRVRKALAEQHAVTRGIYRYARVGIELLH 250

Query: 248 PDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVR----PWYMLSSSIKKR 298
           P   P      ++   +L   +N  F + SH        R       +  +   +R
Sbjct: 251 PVSRPCIETAATLYSGILDEIENADFAVFSHRAAVGTRRRVTVAAGALARAWWVRR 306


>gi|256113440|ref|ZP_05454281.1| Phytoene synthase [Brucella melitensis bv. 3 str. Ether]
 gi|265994829|ref|ZP_06107386.1| phytoene synthase [Brucella melitensis bv. 3 str. Ether]
 gi|262765942|gb|EEZ11731.1| phytoene synthase [Brucella melitensis bv. 3 str. Ether]
          Length = 277

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 82/279 (29%), Positives = 140/279 (50%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P++ ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLSGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|307204004|gb|EFN82908.1| UPF0551 protein C8orf38-like protein [Harpegnathos saltator]
          Length = 287

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 3/271 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            + L+ +R  DY+ +L  LL P   R +   +  F+ E+ +V D   +     MRLQ+W 
Sbjct: 13  EYCLQLVRKSDYENFLCTLLLPHSIRSAAFAIRAFNVEVAQVEDQVSDNKIGAMRLQFWI 72

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           D   +          SP ++EL  I++Q+ L  +YF  +I+A      +    D +  E 
Sbjct: 73  DSLNNIYNDRP--PRSPVAMELHRILQQHKLSKRYFKRLIDARLDKLSSSIFVDLESLER 130

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y     S L +L      +   +A      + G A  +  LI  +P + H+  +  P DI
Sbjct: 131 YCDYTVSSLYYLLLEAQGTANINA-DHAASHFGKAHGLITLIRSIPYNVHKRVMVLPQDI 189

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
           L   G+  ES    Q +     A+   A    ++L  A    + +  D+   F+P    E
Sbjct: 190 LLKNGVSSESIFRRQLNVGFKDAVFDVATCANQHLQMAMSLKKVVGKDLNMIFLPRVRME 249

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           + L+  +   F +        +   P  +  
Sbjct: 250 NYLEELREVDFDVFHPVLQRRKGFLPLQLFW 280


>gi|300785962|ref|YP_003766253.1| phytoene synthase [Amycolatopsis mediterranei U32]
 gi|299795476|gb|ADJ45851.1| phytoene synthase [Amycolatopsis mediterranei U32]
          Length = 320

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 86/290 (29%), Gaps = 7/290 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +            +LA  L  P  R ++  LY F   L  + D      T    
Sbjct: 16  LRAAYTWCRELNARHGRTYFLATRLLTPAQRPAIHALYGFARWLDDIVDEPAEDATPATL 75

Query: 77  LQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
               + + +          S  P    ++    +Y L   YF     +   D        
Sbjct: 76  DARLQKVEKRFLADLDAGASDDPLLTAVIDTAARYTLAKAYFEAFFTSMRMDLTVTGYAT 135

Query: 136 CKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
             + + Y    +  +      ++      + +       G A  +   +  +     RG+
Sbjct: 136 RAELDTYVHGSAEVIGLQVLPVLGTVAPRAEAEPRAAALGKAFQLTNFLRDVGEDLGRGR 195

Query: 195 LYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
           +Y P D L   G+DR+        G+    +  AI+    +      +A+  +  + P  
Sbjct: 196 VYLPADELAVHGVDRDRLHWCAAQGRADQPVRAAIRNQIAVTRDIYAEAQPGIAMLHPVS 255

Query: 251 FPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            P       +   +L   ++ G  + +     ++  R      +  + ++
Sbjct: 256 RPCVATAARLYGGILDRIEDAGHDVFAGRAAVSRGQRLAVACGAVARTQW 305


>gi|62289838|ref|YP_221631.1| hypothetical protein BruAb1_0905 [Brucella abortus bv. 1 str.
           9-941]
 gi|82699763|ref|YP_414337.1| hypothetical protein BAB1_0912 [Brucella melitensis biovar Abortus
           2308]
 gi|189024079|ref|YP_001934847.1| hypothetical protein BAbS19_I08520 [Brucella abortus S19]
 gi|254689143|ref|ZP_05152397.1| hypothetical protein Babob68_02945 [Brucella abortus bv. 6 str.
           870]
 gi|254693627|ref|ZP_05155455.1| hypothetical protein Babob3T_02964 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254706897|ref|ZP_05168725.1| hypothetical protein BpinM_07901 [Brucella pinnipedialis
           M163/99/10]
 gi|254730176|ref|ZP_05188754.1| hypothetical protein Babob42_02984 [Brucella abortus bv. 4 str.
           292]
 gi|256257393|ref|ZP_05462929.1| hypothetical protein Babob9C_08534 [Brucella abortus bv. 9 str.
           C68]
 gi|260545415|ref|ZP_05821156.1| phytoene synthase [Brucella abortus NCTC 8038]
 gi|260754643|ref|ZP_05866991.1| phytoene synthase [Brucella abortus bv. 6 str. 870]
 gi|260757866|ref|ZP_05870214.1| phytoene synthase [Brucella abortus bv. 4 str. 292]
 gi|260883669|ref|ZP_05895283.1| phytoene synthase [Brucella abortus bv. 9 str. C68]
 gi|261213893|ref|ZP_05928174.1| phytoene synthase [Brucella abortus bv. 3 str. Tulya]
 gi|261314360|ref|ZP_05953557.1| phytoene synthase [Brucella pinnipedialis M163/99/10]
 gi|297248243|ref|ZP_06931961.1| phytoene synthase [Brucella abortus bv. 5 str. B3196]
 gi|62195970|gb|AAX74270.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82615864|emb|CAJ10868.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
           2308]
 gi|189019651|gb|ACD72373.1| hypothetical protein BAbS19_I08520 [Brucella abortus S19]
 gi|260096822|gb|EEW80697.1| phytoene synthase [Brucella abortus NCTC 8038]
 gi|260668184|gb|EEX55124.1| phytoene synthase [Brucella abortus bv. 4 str. 292]
 gi|260674751|gb|EEX61572.1| phytoene synthase [Brucella abortus bv. 6 str. 870]
 gi|260873197|gb|EEX80266.1| phytoene synthase [Brucella abortus bv. 9 str. C68]
 gi|260915500|gb|EEX82361.1| phytoene synthase [Brucella abortus bv. 3 str. Tulya]
 gi|261303386|gb|EEY06883.1| phytoene synthase [Brucella pinnipedialis M163/99/10]
 gi|297175412|gb|EFH34759.1| phytoene synthase [Brucella abortus bv. 5 str. B3196]
          Length = 277

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+   +R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGKVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|29893495|gb|AAB87738.2| phytoene synthase [Rubrivivax gelatinosus]
          Length = 344

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 8/272 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S +       +R      + A LL P   R   + LY F        D + +P      
Sbjct: 7   VSSELQACRELMRGGSKSFFAASLLLPQRVRAPATALYAFCRVADDAVDLSGDPHAAMAE 66

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L   +   +    G  A   +     L   V +Y +P      ++E   +D+        
Sbjct: 67  L---RTRLDGVYAGTPAPIAA--DRALACTVHRYGVPRVLLDALLEGFLWDADGRRYDTI 121

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y  R++  +     +I+      A  R  +  G+A     +   +      G+LY
Sbjct: 122 ADVEAYGARVAGTVGAAMALIMGVRSPQALARACE-LGVAMQFTNIARDVGEDARNGRLY 180

Query: 197 FPLDILGAVGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            P   L   GLD +++L        ++  ++       +   ++   +  +  D  PA  
Sbjct: 181 LPRGWLVEAGLDVDAWLQNPVHCPPVAQTVRRLLRAADELYERSEHGIAALPRDCRPAIR 240

Query: 256 PVSI-TESVLKHAQNHGFKIVSHSHTPNQLVR 286
              +    + K  +  G   V+         +
Sbjct: 241 AARLVYAEIGKRLERDGLDSVNRRVVVPARRK 272


>gi|50952786|gb|AAT90319.1| putative phytoene synthase [uncultured proteobacterium
           eBACred25D05]
          Length = 338

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 93/277 (33%), Gaps = 10/277 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D  +    +++     + A  L P   R S   LY F        D   +        
Sbjct: 5   QEDLDYCENAIKNGSLSFHAASRLLPRAVRNSCLALYAFCRLADDEVDLKEDKSASV--- 61

Query: 78  QWWKDIFESSTKGLIAESIS-PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
               D+ E   +    +  + P       +V +  +P      +IE   +D+        
Sbjct: 62  ---YDLVERLEQVYSGKPRNLPMDRAFARMVEETQMPRALPEALIEGLVWDAMERRYNTF 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y+ R++S +  +  +I+     +   R     G+A  +  +   +      G+LY
Sbjct: 119 DELVAYSARVASAVGVMMCVIMRQRDSNVLARACD-LGVAMQLTNIARDIGEDAREGRLY 177

Query: 197 FPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            PL+ +  VG++  SFL+    +  I                ++   +  +   V PA  
Sbjct: 178 IPLNWMKEVGVNPNSFLTVPAPTPEIRELTHRLLSKAEILYQRSESGIVCLPKAVRPAMF 237

Query: 256 PVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
               I  ++ +  +N+ +  ++     ++  +   + 
Sbjct: 238 SARHIYAAIGQEIRNNEYDSITLRAKTSRTKKVELLF 274


>gi|15965294|ref|NP_385647.1| putative phytoene synthase protein [Sinorhizobium meliloti 1021]
 gi|307307884|ref|ZP_07587609.1| Squalene/phytoene synthase [Sinorhizobium meliloti BL225C]
 gi|307317058|ref|ZP_07596499.1| Squalene/phytoene synthase [Sinorhizobium meliloti AK83]
 gi|15074474|emb|CAC46120.1| Putative phytoene synthase [Sinorhizobium meliloti 1021]
 gi|306897146|gb|EFN27891.1| Squalene/phytoene synthase [Sinorhizobium meliloti AK83]
 gi|306901500|gb|EFN32103.1| Squalene/phytoene synthase [Sinorhizobium meliloti BL225C]
          Length = 280

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 112/283 (39%), Positives = 159/283 (56%), Gaps = 3/283 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +    +L  LRD D DRYLACLLSP   R SL+ LY F+ E+ RVRD  + P+  ++R
Sbjct: 1   MQQSDDQILATLRDTDRDRYLACLLSPAEKRHSLAALYAFYAEIARVRDMVKEPLPGEIR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  E         +  P +  LL  +R++ LP +   DMI+A  FD Y+D + D 
Sbjct: 61  LQWWRDTLE---NEQSDGAGHPLAEALLRCIREHHLPVRVLQDMIDARIFDLYDDPMQDR 117

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E YA   +S LI L+++ILD +  + S     +AG+AQ +  L+  LP+H  RGQ+Y
Sbjct: 118 AALEGYAGETASALIQLSSLILDPDNAARSADAAGHAGVAQTVAGLLLLLPVHVGRGQVY 177

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P ++L A GLDRE+ L+G +   I  A++ F  LG  +L KARE    I    F AFIP
Sbjct: 178 LPAELLSATGLDRETLLAGTDESAIERAVRAFCGLGRDHLAKAREGAGAISGRNFSAFIP 237

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           V++ E V   A+  G +I+  S  P Q  R W M  +S ++ F
Sbjct: 238 VALAEPVFDRAEAAGARILRQSLQPPQWQRQWRMWRASRRREF 280


>gi|89052633|ref|YP_508084.1| phytoene synthase [Jannaschia sp. CCS1]
 gi|88862182|gb|ABD53059.1| phytoene synthase [Jannaschia sp. CCS1]
          Length = 337

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 89/283 (31%), Gaps = 8/283 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           I   D       +R+  Y  + A  L P   R     LY F        D   +     +
Sbjct: 2   IDPDDMDHCRHAIREGSYSFHAASKLLPSSVRDPALALYAFCRLADDEVDFGADKPAAVL 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L                    P      +++ ++D+P      ++E   +D        
Sbjct: 62  ALSE-----RLEHAYQGRPRNHPTDRAFTAMIEEFDMPRALPEALLEGLAWDGMERRYAT 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 Y+ R++S +  +  +++      A  R     G+A  +  +   +       +L
Sbjct: 117 LSDLRSYSARVASAVGAMMCVLMRVRDEQALARACD-LGVAMQLTNIARDVGEDAAERRL 175

Query: 196 YFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           Y P D L   G+D E    S  +S R+    K       K   K+   +  +     P  
Sbjct: 176 YLPTDWLEEEGIDIERLFTSPVSSPRLKRLTKRLLAEAHKLYLKSEPGIGRLPLAARPGI 235

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                  +++ ++   HG+  V+   T     +   +  S ++
Sbjct: 236 FAARHCYDAIGRNLAQHGYDNVNRRATTTGGHKMRLLGLSIVR 278


>gi|256369321|ref|YP_003106829.1| hypothetical protein BMI_I891 [Brucella microti CCM 4915]
 gi|255999481|gb|ACU47880.1| hypothetical protein BMI_I891 [Brucella microti CCM 4915]
          Length = 277

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  +LD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFMLDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|83591404|ref|YP_425156.1| squalene-phytoene synthase [Rhodospirillum rubrum ATCC 11170]
 gi|83574318|gb|ABC20869.1| squalene-phytoene synthase [Rhodospirillum rubrum ATCC 11170]
          Length = 687

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 96/278 (34%), Gaps = 4/278 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
           +  V    +      Y A  + P   R+++  +Y F   +  + D       +   L  W
Sbjct: 410 AAHVEAITKASGTSFYGAMRILPRERRLAMYAIYAFCRVVDDIADGTAPEAEKRAELARW 469

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQF 139
           +D  E+           P +  L   +R++ LP + FL +IE    D+     I D  + 
Sbjct: 470 RDEIEALYARGGKGPEHPVARALDGPIRRFALPREDFLAVIEGMELDAGPRVRIRDITEL 529

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E Y   ++  +  L+  I  ++  + S  V ++ G+A  +  ++  +     R +LY PL
Sbjct: 530 EQYCDWVACAVGRLSNRIFGADP-ALSDDVARHTGLALQLTNILRDVVEDAERDRLYLPL 588

Query: 200 DILGAVGLD-RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPV 257
             L A GL   +   +       +      A        +A           + PA I  
Sbjct: 589 SRLRAHGLKTTKDIDAVLVHPATAKVCAELASKAAAEFAEADRAQAACDRKTMRPAIIMK 648

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +   +       G+  +      ++L +    L    
Sbjct: 649 EVYRRIHAALMVRGWARLGEPVKVSRLTKLGIALRHGW 686


>gi|297562505|ref|YP_003681479.1| Phytoene synthase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|296846953|gb|ADH68973.1| Phytoene synthase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 325

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 11/281 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-- 74
                L             Y A  + PP +R  +  LY F   +  + D      T    
Sbjct: 18  LREAYLRCRALHAHHGRTYYTATRVLPPEHRPGVHALYGFARWVDDIVDEPSPGTTVADQ 77

Query: 75  -MRLQWWKDIFESSTKGLIA--ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
             RL            G  A     +P    L   V +Y LP+ YF   + +   D    
Sbjct: 78  TARLDVIDADLARVLDGEPARDPEAAPVLSALAHTVHRYALPHAYFTAFMASMRMDLTVT 137

Query: 132 SIFDCKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
              D +    Y    ++ +      ++        +       G A  +   +  +    
Sbjct: 138 GYRDLEHLREYMHGSAAVIGLQVLPVLGTVAPREEAAPHAAALGEAFQLTNFLRDVAEDL 197

Query: 191 HRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P + L A G+DRE       + +   R+  A+    E+   +  +A   +  +
Sbjct: 198 RRGRVYLPEEALAAHGVDRELLEQCARAREQHPRVREALADLVEVNQGFYRRAEPGIAML 257

Query: 247 LPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVR 286
            P   P       +  ++L   +   + + S  H  +   +
Sbjct: 258 SPVARPCVATAFRLYRAILDEVRAADYDVWSVRHRVSDTRK 298


>gi|46201376|ref|ZP_00208082.1| COG1562: Phytoene/squalene synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 289

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 94/275 (34%), Gaps = 6/275 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
              V   +R      Y    L     R ++  +Y F  E+  + D    P  +  +L  W
Sbjct: 16  YDLVAGIVRASGSSFYWGMRLLDRQRRYAMYAVYAFCREVDDIADEPGEPEVKRAQLAEW 75

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF-DCKQF 139
           +   +              +  L   V QY+LP + FL +I     D+  +       + 
Sbjct: 76  RVELDRLYA---GAPTHAIAKALHGPVIQYNLPKEDFLAVIAGCESDAQPEVTGLSMAEL 132

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E Y  R++  +  L+  +  S R  +        G+A  +  ++  + +    G+LY P 
Sbjct: 133 ELYCDRVACAVGRLSVRVFGSLRPKSIETAN-ATGMALQLTNILRDVVVDAKIGRLYLPD 191

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVS 258
           ++L   G+     ++  N   +    +   E    Y   +          D+ PA +   
Sbjct: 192 ELLAKHGIASRDPMAVINHPNLVAVCRELGETARGYFQASDAAQAECSRADMRPATLMKE 251

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +   + K  +  GF         ++  + W +L  
Sbjct: 252 MYREIFKRLEAEGFVPRDPPVKVSKAFKLWCILRH 286


>gi|258592263|emb|CBE68572.1| Squalene/phytoene synthase [NC10 bacterium 'Dutch sediment']
          Length = 285

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 95/277 (34%), Gaps = 9/277 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
               +    + Y A L  P   R +L  +Y F      + D ++  +     L  W+   
Sbjct: 12  RTITKQSRSNFYYAFLFLPKPKREALYAVYAFCRLSDDLVDESKAGVNPADALTRWRKTL 71

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           +      +    SP    +    RQ+ +P  YF +++     D         +    Y +
Sbjct: 72  DVCLDDGV---DSPVMTAVGQAARQFHIPKVYFEELLNGMEMDLTRARYATFEDLYPYCY 128

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           R++S +  +   I             +  GIA  +  ++  + +   RG++Y P D L  
Sbjct: 129 RVASIVGLICIEIFGYTNPLTKR-YAEQLGIAFQLTNILRDVGVDAQRGRIYLPQDELQR 187

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITESV 263
            G   E  L+G+ +   +  ++   E    Y   A   +       +  A I  +I   V
Sbjct: 188 FGYSEEELLAGRYNYAFTELMRFQCERARGYFRTASAALTAEDERSLLAAEIMRAIYYRV 247

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYM----LSSSIK 296
           L   +   + +     T  +  +        L S+++
Sbjct: 248 LLRIEAQHYDVFRGDITIGKSQKLLLAGGLWLRSALR 284


>gi|294852249|ref|ZP_06792922.1| phytoene synthase [Brucella sp. NVSL 07-0026]
 gi|294820838|gb|EFG37837.1| phytoene synthase [Brucella sp. NVSL 07-0026]
          Length = 277

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 82/279 (29%), Positives = 139/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQMLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|108802039|ref|YP_642236.1| phytoene synthase [Mycobacterium sp. MCS]
 gi|119871191|ref|YP_941143.1| phytoene synthase [Mycobacterium sp. KMS]
 gi|108772458|gb|ABG11180.1| phytoene synthase [Mycobacterium sp. MCS]
 gi|119697280|gb|ABL94353.1| phytoene synthase [Mycobacterium sp. KMS]
          Length = 316

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 90/297 (30%), Gaps = 12/297 (4%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +               +     YLA  L  P  R ++  LY F      + D   +  T 
Sbjct: 13  DPALRNAYRCCRVLNAEHGRTFYLATRLLAPEQRPAVHALYGFARRADDILDDLDSAATT 72

Query: 74  DMRLQWWKDIFESSTK---GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
             R      +            A    P    ++   R+Y +P + F D + +   D   
Sbjct: 73  AERADRLHRLATQLFDGLVQGNATGGDPALAAVVHTARRYGIPWELFDDFLASMRMDLTV 132

Query: 131 DSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
               D    + Y +  +  +   L  ++        +       G A  +   +  +   
Sbjct: 133 TDYPDRASIDRYMYGSAEVIGLQLLPVLGTVVPREEAAPYAAALGKAFQLTNFLRDVDED 192

Query: 190 YHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             RG++Y P D L A G+DR+  +    + +   R+  A+     +  +    AR  +  
Sbjct: 193 LDRGRVYLPADELAAHGVDRDLLMWCHTTKRTDTRVRNALAEQHAVTRRVYDYARHGVDL 252

Query: 246 ILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM---LSSSIKKR 298
           + P           +   +L   +   F I +   T     R       L  + + R
Sbjct: 253 LHPRSRACVGAAAVLYSEILDRIEAIDFDIFNQRATVGNGRRLRVAGAGLLRAWRAR 309


>gi|240850252|ref|YP_002971645.1| phytoene synthase [Bartonella grahamii as4aup]
 gi|240267375|gb|ACS50963.1| phytoene synthase [Bartonella grahamii as4aup]
          Length = 286

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 80/281 (28%), Positives = 131/281 (46%), Gaps = 3/281 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              + L  LR ID DRY++ L +P   R +L+ LY F+ E+ R+R++  +P+  ++RL+W
Sbjct: 4   SLPYCLDILRTIDRDRYISVLFAPKKKRQALAALYVFNAEVSRIRESVHDPLIGEIRLRW 63

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W D              +P   +LL  +  ++LP   FL    A   D Y++ I      
Sbjct: 64  WYDSIAHGEMQTSG--NNPILSDLLKAITLFNLPKTAFLRYCNAQILDLYHNPIETLHDL 121

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           EHY    +S ++ L+  ILD +       + ++ GI+Q +  ++  L     R Q Y P 
Sbjct: 122 EHYCGETASIILQLSCQILDPDTAQEFTDIYEHGGISQGLSGVLRLLSFMQSRYQYYLPT 181

Query: 200 DILGAVGLDRESFLSGQNSDRIS-LAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
           DIL AVG++RE   S + SD+     ++    L      K  E    +   + PAF+P+ 
Sbjct: 182 DILKAVGVNREDLESHRLSDQQKDRIVEAMVALSRDRYTKFYEYSCALPRVLKPAFLPLV 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           I  + L+ A   G  I   S T   + R W +  ++I   F
Sbjct: 242 IVPASLQKAIQLGAAIFQESATLPLIYRYWLITRAAISGNF 282


>gi|218288699|ref|ZP_03492962.1| Squalene/phytoene synthase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241057|gb|EED08233.1| Squalene/phytoene synthase [Alicyclobacillus acidocaldarius LAA1]
          Length = 289

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 3/284 (1%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             +    +  R  R+     Y    + PP  R ++  +Y +        D          
Sbjct: 2   NLALAYEYCARRTREAGSSFYYGMRMLPPAKRRAMYAIYAWSRLCDDAVDDHTGADAAC- 60

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L   + I++++       S  P  + L  +VR+Y +P + F  +I     D     +  
Sbjct: 61  HLATAERIYQAAYADDYRASSDPVVLALGDVVRRYGIPQEPFAHLIRGMQVDMAPVRLKS 120

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
               + Y   ++  +  +   I       A L + +  G A  I  ++  L     R ++
Sbjct: 121 QADLDAYCDDVAGTVGLMCVHIFGFRDPRA-LDLARDMGRALQITNILRDLAEDLARDRV 179

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P + +   G         + +      ++  AE    Y  +A E    + PD      
Sbjct: 180 YLPEEEMERFGYSLADLAERRMTPAFFALMRAQAERAKAYYARAAELFSLVEPDSLRCLS 239

Query: 256 PV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +  +   +L   +  GF++     +     +   +      KR
Sbjct: 240 MLYVMYRRLLDKIEARGFRVFDERISLTGSQKLRLVWGVLWNKR 283


>gi|91977244|ref|YP_569903.1| phytoene synthase [Rhodopseudomonas palustris BisB5]
 gi|91683700|gb|ABE40002.1| phytoene synthase [Rhodopseudomonas palustris BisB5]
          Length = 288

 Score =  178 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 4/282 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
              + F    +R  D+DRY A L   P  R SL  LY F+TE++RVRD    P+  ++RL
Sbjct: 8   DAAAAFCAELVRSHDFDRYAATLFVDPPCRRSLLALYAFNTEIVRVRDQVSQPLPGEIRL 67

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           QWW D    +         +P + ELL  V+Q+ LP      +IE H FD YND +    
Sbjct: 68  QWWTDTLAGTAH--GGVEGNPVAAELLRAVQQHALPVAALSQLIETHLFDLYNDPMPTMA 125

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             E +A      L  LA  ILD     A   + ++AG+AQ   ++I +LP+   R Q + 
Sbjct: 126 ALEAHAADTDGALFALAARILDQGS-EAVDHLARHAGLAQGFARVIARLPLDASRRQCFV 184

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P+++L   G       +G+ +  + LA+       L++L  A   +  + P    A +P+
Sbjct: 185 PVELLEKNGSGEADVYAGRETPALRLALNELIAEALRHLDIALRLLGEVTPAARRAMLPL 244

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++T   L         + +  H  ++L   W +  +S  K F
Sbjct: 245 ALTRRDLDRMAQSETDLFA-PHERSRLATLWTLWRASRTKMF 285


>gi|83310465|ref|YP_420729.1| putative phytoene synthase [Magnetospirillum magneticum AMB-1]
 gi|82945306|dbj|BAE50170.1| Putative phytoene synthase [Magnetospirillum magneticum AMB-1]
          Length = 286

 Score =  178 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 90/275 (32%), Gaps = 6/275 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
              V   +R      Y    L     R ++  +Y F   +  + D   +P  +  +L  W
Sbjct: 13  YDMVAEIVRASGSSFYWGMRLLDRPRRYAMYAIYAFCRVVDDIADEPGDPEVKRAQLAEW 72

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF-DCKQF 139
           +   +              +  L   V QY+LP + FL +I     D+  +       + 
Sbjct: 73  RVELDRLYA---GAPTHAVAKALHGPVLQYNLPKEDFLAVIAGCESDAQPEVTRLSMAEL 129

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E Y  R++  +  L+  +    R  +        G+A  +  ++  + +    G+LY P 
Sbjct: 130 ELYCDRVACAVGRLSIRVFGPLRPKSIETAN-ATGMALQLTNILRDVAVDAKIGRLYLPD 188

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVS 258
           ++L   G+     +       +    +   E    Y   +          D+ PA +   
Sbjct: 189 ELLSKHGIASRDPMEVLAHPNLVAVCRELGETARGYFLASDAGQAECSRADMRPATLMKE 248

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +   +    +  GF         ++  + W +L  
Sbjct: 249 MYREIFTRVEAEGFVPRDPPVKVSKAFKLWCILRH 283


>gi|111221588|ref|YP_712382.1| phytoene synthase [Frankia alni ACN14a]
 gi|111149120|emb|CAJ60803.1| Phytoene synthase [Frankia alni ACN14a]
          Length = 345

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 87/296 (29%), Gaps = 23/296 (7%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              YLA LL PP  R  +  LY F      + D   + +T D R
Sbjct: 27  LRASYARARALNAAHGRTYYLATLLLPPWKRAHVHALYGFARHADDIVDDLDSALTGDER 86

Query: 77  ---LQWWK-DIFESSTKGLIAESISP-----------------FSVELLSIVRQYDLPNQ 115
              LQ W      +   G+ A ++                       ++  +R++ L   
Sbjct: 87  AVRLQAWSGRFLAALRDGVPAHAVDAQVSGEDGGQNGAASEVSVLPAVVDTIRRFALDPD 146

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGI 175
           +F   + +   D         +    Y    ++ +      +L+    SA L   +  G+
Sbjct: 147 HFAAFLSSMAMDLTVTGYATWEDLLVYMHGSAAVIGLQMVPLLEPVDDSA-LPYARDLGL 205

Query: 176 AQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKY 235
           A      I  +     RG++Y P   L   G+ RE   +G     +   +        + 
Sbjct: 206 AFQHANFIRDVGEDLRRGRVYLPQTSLALFGVTREHLAAGVVDGPVRRLLAFEISRAREL 265

Query: 236 LFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              A   +R + P           +   +L   +   ++++          R    
Sbjct: 266 FRAAAPGIRLLHPTSRDCMRTAFVLYREILDEVERADYRVLERRVAVGLPRRLAVA 321


>gi|225025000|ref|ZP_03714192.1| hypothetical protein EIKCOROL_01889 [Eikenella corrodens ATCC
           23834]
 gi|224942230|gb|EEG23439.1| hypothetical protein EIKCOROL_01889 [Eikenella corrodens ATCC
           23834]
          Length = 283

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 90/279 (32%), Gaps = 4/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +  +   +             P  R +++ LY +  EL  V D   +P      L WW
Sbjct: 4   YDYCHQKAEESGSSFLAGFRFLLPEKRRAMTVLYAYCRELDDVADDCADPAVAAQTLAWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +           A    P +  +  +   Y LP      +I+    D       D    +
Sbjct: 64  RQDAAKVFH-GAALPEHPVNQAMREVAPAYGLPENELAAVIDGVEMDLTPARYADFATLQ 122

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  L   IL  +  +A L      G+A  +  +I  +      G++Y P++
Sbjct: 123 QYCQRVAGVVGRLIARILGFQD-AAVLDYADKMGLALQLTNIIRDVGEDAVAGRIYLPVE 181

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            L    +     L  +NS   +  +        +   +A   +         A  +  +I
Sbjct: 182 DLQRFNVPAADLLQRRNSQEFAELMAFQVARARQTYSEAVALLPAAERRGQKAGLVMAAI 241

Query: 260 TESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L   +  G   ++ +     +  +    L + +  
Sbjct: 242 YYALLNEIERDGAANVLRYKLAIPKPRKARIALKTWLLG 280


>gi|168698850|ref|ZP_02731127.1| Squalene/phytoene synthase [Gemmata obscuriglobus UQM 2246]
          Length = 301

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 90/281 (32%), Gaps = 5/281 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S    +     R    +  +  LL P         +Y +      + D      T    
Sbjct: 22  LSDARAYCAGVARSHYENFTVVSLLLPRRLVKHFHAVYAYCRWSDDLADETAGGQTALDL 81

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           + WW+    S  +    E   P  + L   VR++D+P   FL ++ A   D         
Sbjct: 82  IAWWRRELMSCYE---GEPRHPVMLALRETVRRFDIPPDPFLALLVAFEQDQRVKRYDTF 138

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +Q   Y    ++ + HL   + +    +    +         +      +      G++Y
Sbjct: 139 EQLAGYCANSANPVGHLVLRLFEC-FDAERAALSDEVCTGLQLANFWQDVARDLDIGRVY 197

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-AFI 255
            P +     G   E   + + + +    ++        Y  +    +  +         +
Sbjct: 198 LPAEDRARFGYSDEDLDARRCTPQFLELMRFEVSRARGYFARGAALLPLLPRAARVDVDL 257

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            +   E++L   +  G+ + +     +++ +   +L ++++
Sbjct: 258 FIRGGEAILDAIERQGYDVWARRPEVSKVAKAKLLLGAAVR 298


>gi|229918212|ref|YP_002886858.1| Phytoene synthase [Exiguobacterium sp. AT1b]
 gi|229469641|gb|ACQ71413.1| Phytoene synthase [Exiguobacterium sp. AT1b]
          Length = 279

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 96/280 (34%), Gaps = 10/280 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                     ++      Y A  L     R ++  +Y F   L    D +  P   +  L
Sbjct: 4   QEAYRQCEEIMKKGSLTFYRAFSLLSKPDRQAVMAVYTFCRTLDDAVDESDRP---EESL 60

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             +   F+    G   +      V L  + ++YD+  + F ++ E   +D +       +
Sbjct: 61  AVFLHDFDRFLAGYDLDEA--LWVALRDVWKRYDMDVEPFFELAEGMKWDLHKSRYETLE 118

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIK----YAGIAQFIGQLICQLPIHYHRG 193
           + E Y++  +S +  +   IL   +  A+ R ++      GIA  +  ++  +    +R 
Sbjct: 119 ETEQYSYYAASTVGLMLLPILVPNQDEATTRQLRQGAIDLGIAMQLTNILRDVGEDLNRD 178

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-P 252
           ++Y P  ++   G+  E     + +       +  A        +ARE           P
Sbjct: 179 RIYLPRTMMRQYGVSEEMLQQREVTPVFIDLWETLASRAEFLYARARETHHLYPLASRKP 238

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                 + E +L  A+ +   + +     + L +   +  
Sbjct: 239 VQAAALLYEGILDAARANRHDVFTKRAYVSTLQKGKLLAK 278


>gi|289580684|ref|YP_003479150.1| Phytoene synthase [Natrialba magadii ATCC 43099]
 gi|289530237|gb|ADD04588.1| Phytoene synthase [Natrialba magadii ATCC 43099]
          Length = 318

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 93/279 (33%), Gaps = 9/279 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQWWKD 82
            +  R      YLA    P   R +   LY F      + D A    P T+   L+  + 
Sbjct: 10  KQIQRRTGKTFYLATKFLPQRVRHATHVLYAFFRIADEIVDDADGVPPETQRAELESLRA 69

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                T     E   P      ++  +Y++P++     I+A   D          + + Y
Sbjct: 70  QALGET-----EPEDPVLEAFRTLCERYEIPDEEINVFIDAMATDITKSRYETAAELDDY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDI 201
               ++ +  + T I++ E    +       G A  +   +  +      R ++Y P + 
Sbjct: 125 MRGSAAAVGVMMTAIMEPEFPETARPHAIKLGEAFQLTNFLRDVREDILDRDRIYLPEET 184

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+      + +  D  + A+    +            +RY+  D  FP  +   + 
Sbjct: 185 LRKHGVSDAQIEALEFDDSFAAAMAEELQRTEARYRAGVAGIRYLPDDCQFPVLVAAVLY 244

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                  +  G+ +++   + +   +   +L +    ++
Sbjct: 245 AEHHALIRAQGYDVLTSEPSLSTARKLRCVLQTRWHWQW 283


>gi|161611646|gb|AAI55865.1| LOC100135115 protein [Xenopus (Silurana) tropicalis]
          Length = 292

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 3/281 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           + + + +  +R  DY+ +L  LL P   + S+  L   + EL +V+D+        MR+Q
Sbjct: 15  QAAGYCVELVRKRDYEGFLCTLLLPQESQNSVFALRALNVELSQVKDSVSQKSLGLMRMQ 74

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           +W+D  +   K        P ++ L   V+++ L  ++F+ MI+A   +  + +  + ++
Sbjct: 75  FWRDAVQDIYKETP--PHHPVALALSQAVQRHRLTKRWFMRMIDAREQNLDDRTYRNIQE 132

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            E YA    S L++L    L  +   A      + G AQ I   +  +P H  R Q++ P
Sbjct: 133 LETYAENTQSSLLYLILETLGIKDVQA-DHAASHIGKAQGIITCMRAVPYHSSRRQVFLP 191

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
           +DI       +E F+ G     +   I   A     +L  AR   + I    FPAF    
Sbjct: 192 IDICMLHRASQEDFIRGSLEKNVKDVIFDIASQAHVHLEHARSFKKRIPKSAFPAFNITV 251

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +  LK  +   F I   S      + P  +   S K+ +
Sbjct: 252 ALDWHLKTLRKADFNIFHPSLQRKNTLLPLSLYVRSWKQSY 292


>gi|77024201|gb|ABA55571.1| chloroplast phytoene synthase [Pavlova lutheri]
          Length = 321

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 9/258 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +       +         YL      P    ++  +Y +      + D  R  +    R
Sbjct: 65  LAEGYEVCRKITASYAKTFYLGTRFMAPPRARAIWAVYAWCRRTDDIVDAPRGGVKYLKR 124

Query: 77  -LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD-LPNQYFLDMIEAHFFDSYNDSIF 134
            +  W    E   +    E+     + L+  V+QY  +  Q + DMIE    D   D   
Sbjct: 125 EIAAWSARLE---RIWEGEAFDVVDLPLVETVKQYPTMSIQPYKDMIEGMLMDLKQDRYE 181

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIHYH 191
                  Y +R++  +  +   ++ +         ++     GIA  +  ++  +     
Sbjct: 182 TFDDLHLYCYRVAGTVGLMTLPVMGTADGVTYEEAVEPALALGIALQLTNILRDVGEDAR 241

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D L   G+  E  L+G   +     ++        Y  K+ + +  +     
Sbjct: 242 RGRIYLPKDELKRFGVSEEQVLAGVLDENYVRLMQFQIARARDYFDKSEDGISKLDASAR 301

Query: 252 -PAFIPVSITESVLKHAQ 268
            P    + +   +L+  +
Sbjct: 302 MPVRASLDLYRKILERIE 319


>gi|189220218|ref|YP_001940858.1| Phytoene/squalene synthetase fused to flavin containing amine
           oxidoreductase [Methylacidiphilum infernorum V4]
 gi|189187076|gb|ACD84261.1| Phytoene/squalene synthetase fused to flavin containing amine
           oxidoreductase [Methylacidiphilum infernorum V4]
          Length = 769

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 103/277 (37%), Gaps = 7/277 (2%)

Query: 26  RNLRDIDYDRYLACLL-SPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           +++               P   + +++  Y F   +  + D+   +P  +   + +WK  
Sbjct: 22  QSVTSRSKSNLALSFFCLPREQKWAMTVFYAFCRVIDDIVDSTMLSPQEKKEGIFFWKKE 81

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            E     + +    P   EL  +V +++LP     ++I     D         ++   Y 
Sbjct: 82  IERIYTSMPSS---PLGKELREVVIKWNLPQDILQEIILGVEMDITQSRYKTFEELSLYC 138

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           +R++  +  ++  I     +S S       G A  +  ++  +P     G++YFPL+ L 
Sbjct: 139 YRVAGAVGLISIEIFGCS-HSFSREYALTLGKAFQLTNILRDVPKDSAYGRIYFPLEELE 197

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM-RYILPDVFPAFIPVSITES 262
             G+  +  L  + S +I    +        Y  K+ + +     P +  A I  ++  +
Sbjct: 198 EHGISEKELLDLKWSLKIREFFRFQYLRAKHYFAKSSKLIHPSDRPKLLAAEIMSAVYRA 257

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +L+  +   F +  HS   ++  +   +    +   F
Sbjct: 258 ILEKIRAKQFNVFHHSIRLSKSQKLASIFKVLVTNFF 294


>gi|332109924|gb|EGJ10552.1| phytoene synthase [Rubrivivax benzoatilyticus JA2]
          Length = 345

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 83/272 (30%), Gaps = 8/272 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S +       +R      + A LL P   R   + LY F        D + +P      
Sbjct: 7   VSTELQACRELMRGGSKSFFAASLLLPQRVRAPATALYAFCRVADDAVDLSGDPHAAMAE 66

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L   +   +    G            L   V ++ LP      ++E   +D+        
Sbjct: 67  L---RSRLDKVYAGTPEPIA--ADRALACTVHRHGLPRVLLDALLEGFLWDAEGRRYETV 121

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y  R++  +     +I+      A  R  +  G+A     +   +      G+LY
Sbjct: 122 ADVEAYGARVAGTVGAAMAVIMGVRSPQALARACE-LGVAMQFTNIARDVGEDARNGRLY 180

Query: 197 FPLDILGAVGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            P   L   GLD +++L        ++  ++       +   ++   +  +  D  PA  
Sbjct: 181 LPRQWLREAGLDVDAWLKNPVHCPEVAQTVRRLLRAADELYERSEHGIAALPRDCRPAIR 240

Query: 256 PVSI-TESVLKHAQNHGFKIVSHSHTPNQLVR 286
              +    +    +  G   V+         +
Sbjct: 241 AARLVYAEIGHRLERDGLDSVNRRVVVPARRK 272


>gi|310826712|ref|YP_003959069.1| phytoene synthase [Eubacterium limosum KIST612]
 gi|308738446|gb|ADO36106.1| phytoene synthase [Eubacterium limosum KIST612]
          Length = 287

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 9/280 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
              RD  F    +++     Y A    P    +S+  +Y F      + D  ++      
Sbjct: 4   TLERDYAFCEDVIKENSKSFYRAFSALPRQKALSIFAIYAFCRRADDLADIQQD----RR 59

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L+ +++ FE+   GL      P    L      Y++    F DM+     D   +    
Sbjct: 60  GLEAFQETFEAFKAGLT--PDEPMWRALRHTAEHYNIDFLPFDDMLTGQRMDLNFEQPAT 117

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
               E Y + ++  +  +   +  S+ +    +     G A  +  ++  +       ++
Sbjct: 118 QTALESYCYYVAGSVGLMILPV-LSKHHRLLTQNAVDLGKAMQLTNILRDVGEDLTNKRV 176

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAF 254
           Y P +I    G   E       +       +  A        KA   +     D   P  
Sbjct: 177 YIPREIQLLYGYSDEELHGQTVNHTFKQLWEHEARRSEFLYKKALMGLPLFDADSRLPVL 236

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           +   +   +L   +++ +   S      +      +   S
Sbjct: 237 LATVLYRQILTAVRDNQYDCFSKRAVVPKAR-QLLLYRQS 275


>gi|310824304|ref|YP_003956662.1| phytoene synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309397376|gb|ADO74835.1| Phytoene synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 317

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 88/295 (29%), Gaps = 26/295 (8%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT---ARNPITRDMRLQWWKDI 83
             R      + A  L     R +   LY F   L  + D       P+    RL+  +  
Sbjct: 1   MTRHHAKSFFFASYLLFGERRKAAFALYAFCRRLDDMVDETGEGSAPLDLKARLERARQR 60

Query: 84  FESSTKGLIA--------------------ESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
                  +                               L   + ++ +P Q F D+I  
Sbjct: 61  VAEVYLPMPELAAPGLESPAQRLMGAQEQCPWNEGEFAALKHCIHRFRIPEQPFQDLISG 120

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
              D         ++ + Y +R++  +  + T +L      A        G    +  ++
Sbjct: 121 MEMDLTKHRYATFEELDLYCYRVAGVVGLMLTPVLGCVDERAVAHAAD-LGRGMQLTNIL 179

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P   L + GL  E   +G+  DR    ++        Y   A   +
Sbjct: 180 RDVREDLERGRVYLPSSELASFGLSEEDLRAGRVEDRWRNFMRFQISRARAYYASAAAGL 239

Query: 244 RYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            Y+          +   I   +L+  +   + + S         +    +++ ++
Sbjct: 240 PYLTGLGSRRMVRLMGGIYGDILRVIEERDYDVFSARAYVPDRRKLALAVAAMVR 294


>gi|301603839|ref|XP_002931576.1| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial [Xenopus
           (Silurana) tropicalis]
          Length = 301

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 3/281 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           + + + +  +R  DY+ +L  LL P   + S+  L   + EL +V+D+        MR+Q
Sbjct: 24  QAAGYCVELVRKRDYEGFLCTLLLPQESQNSVFALRALNVELSQVKDSVSQKSLGLMRMQ 83

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           +W+D  +   K        P ++ L   V+++ L  ++F+ MI+A   +  + +  + ++
Sbjct: 84  FWRDAVQDIYKETP--PHHPVALALSQAVQRHRLTKRWFMRMIDAREQNLDDRTYRNIQE 141

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            E YA    S L++L    L  +   A      + G AQ I   +  +P H  R Q++ P
Sbjct: 142 LETYAENTQSSLLYLILETLGIKDVQA-DHAASHIGKAQGIITCMRAVPYHSSRRQVFLP 200

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
           +DI       +E F+ G     +   I   A     +L  AR   + +    FPAF    
Sbjct: 201 IDICMLHRASQEDFIRGSLEKNVKDVIFDIASQAHVHLEHARSFKKRVPKSAFPAFNITV 260

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +  LK  +   F I   S      + P  +   S K+ +
Sbjct: 261 ALDWHLKTLRKADFNIFHPSLQRKNTLLPLSLYVRSWKQSY 301


>gi|158424515|ref|YP_001525807.1| phytoene synthase [Azorhizobium caulinodans ORS 571]
 gi|158331404|dbj|BAF88889.1| phytoene synthase [Azorhizobium caulinodans ORS 571]
          Length = 297

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 3/279 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D  +    +R  D DR+LA L +P   R  L  LY F+ E+ RVR+  R  +  ++RLQW
Sbjct: 22  DYAYCTDLVRAQDRDRFLAALFAPADKRQDLFALYAFNVEVARVREVVREALPGEVRLQW 81

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+++ E   +G +     P +  LL  + +Y LP    L++IEA  FD Y+D +      
Sbjct: 82  WRELIEGHGRGEVG--GHPVASALLGTIGRYSLPRGALLNLIEARVFDLYDDPMPSMNDL 139

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E YA   +S L+ L+  IL      A      + G+A  +  L+  LP+H  RGQ + PL
Sbjct: 140 EGYAGETASALLQLSAHILGGGPRPALANACGHGGVAIALAGLMRALPVHAARGQCFLPL 199

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
           D+L   G  R+  ++ + +  I   +        ++L +A + +  + P + PAF+ +++
Sbjct: 200 DVLKRHGSSRDEVVARKPTPGILATLADLRTQAARHLMEAEKALAGLDPALAPAFLTLAL 259

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
               LK  +       +     + L R W +  +S + R
Sbjct: 260 VPGDLKALERLK-DPFARVGGLSALRRQWTLWRASARTR 297


>gi|72163475|ref|YP_291132.1| phytoene synthase [Thermobifida fusca YX]
 gi|71917207|gb|AAZ57109.1| phytoene synthase [Thermobifida fusca YX]
          Length = 330

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 97/296 (32%), Gaps = 11/296 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +       L             YLA L  PP  R ++  LY F   +  V D  R  + 
Sbjct: 11  TDPQLCAAYLHCRTLHAHHGRTYYLATLTLPPQRRPAIHALYGFARWVDDVIDAPRTALP 70

Query: 73  RDMRLQWWKDI-FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
            + R     ++  E +      E + P    +    R+Y++  + F   + +   D    
Sbjct: 71  VEARAALLSEVGTELTAALAGGEDVHPVVRAVADTARRYEIGAELFTAFLRSMRMDLSTT 130

Query: 132 SIFDCKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                +    Y +  ++ +      ++        +       G A  +   +  +    
Sbjct: 131 DYASFEDLRGYMYGSAAVIGLQVLPVLGTVVPLPRAAPHAAALGEAFQLTNFLRDVAEDL 190

Query: 191 HRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P DIL   G+DR+  L      +   R+  A+     L  +    A   +  +
Sbjct: 191 DRGRVYLPADILARYGVDRDLLLWCRAHRRGHPRVRDALAHLVALNREIYRTAAPGIAML 250

Query: 247 LPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM----LSSSIKK 297
            P   P      ++ + +L   +  GF + S   T  Q  R          + +++
Sbjct: 251 DPVSRPCVATAFTLYQGILDVIEASGFDVWSGRCTVPQWRRVQVAVPAFARAMLRR 306


>gi|121602819|ref|YP_988841.1| hypothetical protein BARBAKC583_0526 [Bartonella bacilliformis
           KC583]
 gi|120614996|gb|ABM45597.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
          Length = 286

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 84/278 (30%), Positives = 143/278 (51%), Gaps = 3/278 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
             L  LR  D DRY++ L +P   R +L+ LY F+ E+ R+R++  +P+  +MRL+WW D
Sbjct: 7   HCLSVLRATDRDRYISVLFAPKRKRRALAALYAFNAEIARIRESVSDPLIGEMRLRWWYD 66

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
              +ST  +     +P   ELL  +  ++LP + FL   +A  FD YN+SI      E Y
Sbjct: 67  SIANST--VPNGENNPILNELLETIILFNLPKEAFLQYCDARIFDLYNNSIITIHDLESY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
            ++ +S+++ LA  ILD +         ++ G++Q +  ++  L +   R Q YFP D+L
Sbjct: 125 CYKTASKILQLACQILDFDSAKNFTDACEHGGVSQALSGILRLLSLMQSRYQCYFPSDML 184

Query: 203 GAVGLDRESFLSGQNSDRIS-LAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
            A+G+DRE   S + +D+     I+    L   +  K  E    +   + PAF+P++IT 
Sbjct: 185 RALGIDREDLESNRITDKQKCQMIEAMVALSRDHYLKFYEYSIILPETLKPAFLPLAITP 244

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             L+ A     ++  +S   + L R W +  ++I   F
Sbjct: 245 VSLQKALKLEAEVFQNSINSSLLHRYWLITKTAICGNF 282


>gi|18645045|gb|AAL76346.1| phytoene synthase [uncultured marine proteobacterium]
          Length = 379

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 85/278 (30%), Gaps = 8/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D     + L       ++A  L PP  R     LY F  E   + D   +       L
Sbjct: 28  HTDLAHCRQTLSGGSRSFWVASQLLPPTLRNDACGLYAFCREADDLIDEGDDADAA---L 84

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
               +  +    G   E        L  IV  + LP      ++E   +D+         
Sbjct: 85  AQLHERLDGIYSGAPQERT--VDRVLQRIVIHHQLPRTLLEALLEGFAWDASGRHYHTLS 142

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y  R++  +  +  +++     +A  R     G+A  +  +   +      G+LY 
Sbjct: 143 DVFAYGARVAGVVGVMMAVLMGVRESNALARAAD-LGVAMQLTNIARDVGEDARAGRLYL 201

Query: 198 PLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P  +L   G+D ESFL +   S  +   ++       +   ++   +  +     P    
Sbjct: 202 PRQMLVDAGIDPESFLQAPTFSPALCTVVERLLLEAEQLYRRSESGIALLPVGARPGIYA 261

Query: 257 VS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
              +   +       G   +          +   +L +
Sbjct: 262 ARLLYAEIGHALLKSGGNSIDTRAYIGMAGKARLVLRT 299


>gi|219964680|gb|ACL68404.1| squalene/phytoene synthase [Streptomyces peucetius ATCC 27952]
          Length = 316

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 84/283 (29%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +          +      L P   R ++S LY F   +  + D    P  +  R
Sbjct: 15  VQAAYSYCEAVTGQQARNFAYGIRLLPTHKRQAMSALYAFSRRVDDIGDGTLKPQAKQDR 74

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+  +++ E   +G + E    P +V L    R++ LP     ++I+    D   +S   
Sbjct: 75  LEGTRELLERIRRGAVDEDDTDPVAVALSDAARRFPLPLGGLDELIDGVLMDVRGESYET 134

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY----SASLRVIKYAGIAQFIGQLICQLPIHYH 191
               + Y   ++  +  L+  +  ++        +       G+A  +  ++  +     
Sbjct: 135 WDDLKVYCRCVAGAIGRLSLGVFGTQPGVRGAERAAEYADTLGLALQLTNILRDVTEDAA 194

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P D L   G        +       +  +            +    +  +    
Sbjct: 195 NGRTYLPADDLAKFGCSEGFHGTTPPPGADFTGLVHFEVRRARALFAEGYRLLPMLDRRS 254

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 255 GACVAAMAGIYRRLLDRIEREPEAVLRGRVSLPGREKAYVAVR 297


>gi|148255763|ref|YP_001240348.1| putative phytoene synthase [Bradyrhizobium sp. BTAi1]
 gi|146407936|gb|ABQ36442.1| putative phytoene synthase (terpenoid synthase) [Bradyrhizobium sp.
           BTAi1]
          Length = 288

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 5/288 (1%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E   S D+ F    +R+ D+DRY + L   P  R +L  LY F+ E+ R+RD    P+ 
Sbjct: 2   SETSASTDAAFCASLVREHDFDRYASTLFVAPEIRRALLSLYAFNVEVTRIRDVVSQPLP 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            ++RLQWW D              +P + ELL  V+++ LP      +I+ H FD YND 
Sbjct: 62  GELRLQWWHDTLTGQEH--GGVEGNPVAAELLLTVQRFALPVDRLTRLIDEHQFDLYNDP 119

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
           +      + Y       L  LA  I      +    +  +AG+AQ I  LI  LP    R
Sbjct: 120 MPTMAALDGYLGDTRGALFALAARI-VVGAVADIDHLAHHAGLAQGILHLIASLPRDAAR 178

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            QL+ PLD+L   GL +E   + + +  I   +        ++L    E  R     V P
Sbjct: 179 RQLFIPLDLLARHGLGQEQVFAAKATPVIRAMLAELRGQARQHLDHTLELAREAPGGVRP 238

Query: 253 AFIPVSITESVLKHAQNH-GFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +P+++    L  A+              ++L   W +  ++    F
Sbjct: 239 VLLPLALVSRDLVRAERRIDADPFQPQLR-SRLATLWTLWRAARSPAF 285


>gi|163735447|ref|ZP_02142880.1| phytoene synthase [Roseobacter litoralis Och 149]
 gi|161391260|gb|EDQ15596.1| phytoene synthase [Roseobacter litoralis Och 149]
          Length = 339

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 95/277 (34%), Gaps = 8/277 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           I   D       +R      + A  L P   R     LY F        D  ++ +   +
Sbjct: 2   IAPADMEHCREAIRHGSLSFHAASKLLPAHVRDPALALYAFCRLADDEVDLKQDKVASVL 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RL   +D  +    G    +  P      +IV ++++P      ++E   +D+       
Sbjct: 62  RL---RDRLDQVYAGRPKNA--PTDRAFAAIVEEFEMPRALPDALLEGLAWDAAERRYDT 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
               + Y+ R++S +  +  +++      A  R     G+A  +  +   +       ++
Sbjct: 117 LSGVKDYSARVASAVGAMMCVLMRVRDADALARACD-LGVAMQLTNIARDVGEDALERRI 175

Query: 196 YFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           Y PLD L   G++ E+F +  + +  +   +K       +   ++   +  +     P  
Sbjct: 176 YLPLDWLEEAGIEVEAFFADPEATKAVRGMVKRLVMEANRLYMRSEAGVGALPRGCRPGI 235

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                I   +       G+  +S     N+  +  ++
Sbjct: 236 YGARFIYAGIGSQLTRMGYDSISARARTNKWQKIGWL 272


>gi|325110070|ref|YP_004271138.1| squalene synthase HpnC [Planctomyces brasiliensis DSM 5305]
 gi|324970338|gb|ADY61116.1| squalene synthase HpnC [Planctomyces brasiliensis DSM 5305]
          Length = 305

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 86/284 (30%), Gaps = 6/284 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +   +  R       +  +     P   R     +Y F      + D   +       
Sbjct: 24  LEKARQYTKRVALGHYENFPVVSWCLPAHLRQPFYDVYAFCRWADDLGDEIDSTDESLRL 83

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L WW++  +            P  V L   +R+++L  ++F ++I A   D         
Sbjct: 84  LAWWREELQDCYA---GRPKHPVYVALEQTIREFELSERHFQNLISAFEQDQQQTRYATR 140

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++   Y  R ++ +  +   +  ++    +L +         +      +   Y   ++Y
Sbjct: 141 EELVDYCTRSANPVGRILLELAKADS-ERNLLLSDDVCTGLQLINFWQDVARDYEINRVY 199

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-AFI 255
            P   +   G+  +   SG  +D     +K   +     L   RE    I   +     +
Sbjct: 200 LPQADMQQHGVAEQVLQSGIATDPFRALLKEEVDWAESLLLSGRELALSIPASIRFDIRL 259

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                  + +  +   +  +S      +   P     +  + +F
Sbjct: 260 FSLGGLKICEKIRKQQYDTLSSRPKLKKFDMPVLFWRA-WRGKF 302


>gi|325292956|ref|YP_004278820.1| phytoene synthase [Agrobacterium sp. H13-3]
 gi|325060809|gb|ADY64500.1| phytoene synthase [Agrobacterium sp. H13-3]
          Length = 281

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 108/282 (38%), Positives = 160/282 (56%), Gaps = 4/282 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + +    L  LRD D DRYLACLLSP   R +L+ LY F+ E+ R+RD+ R  +  ++R+
Sbjct: 4   TENLDVCLATLRDTDRDRYLACLLSPADKRAALAALYAFNAEIARIRDSVREALPGEVRM 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           QWW+D+ + +  G       P +  LL  + QY LP     +MIEA  FD Y+D   D  
Sbjct: 64  QWWRDLLDGNAHGDSQ--SHPVAAALLLAIEQYRLPRPVLANMIEARIFDLYDDLFVDRN 121

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             E YA   +S LI LA+++L  E   AS     +AG+AQ +  ++  +P+H  RGQ+Y 
Sbjct: 122 ALEGYAGETASALIQLASLVLSPEDTPASAEAAGHAGVAQAMAGILMLMPLHRRRGQVYI 181

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P D+L A GLDRE+FL G +  RI +AI+IFA   L ++ KAR     +  +VF A++PV
Sbjct: 182 PADMLAAAGLDRETFLEGDDKQRIGIAIEIFATHALDHIEKARR--AKMSRNVFAAYLPV 239

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +++  V+  A+  G  +       +QL R W +  +S  KRF
Sbjct: 240 ALSGPVIAAARKAGAGVFEGEVQLSQLRRQWLLAKASFLKRF 281


>gi|90422773|ref|YP_531143.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisB18]
 gi|90104787|gb|ABD86824.1| phytoene synthase [Rhodopseudomonas palustris BisB18]
          Length = 348

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 86/277 (31%), Gaps = 8/277 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D       L++     + A L+ P         LY F        D   +       L
Sbjct: 4   QSDLAACREMLKEGSRTFHAASLVLPRRISDPAVALYAFCRVADDAVDLGVDRAAAVELL 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +   D               P       +V +Y +P+     +IE   +D+         
Sbjct: 64  KDRLDRICRGLPMPY-----PSDRAFADVVARYAIPDAIPAALIEGLAWDAEGRRYETLS 118

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               YA R++  +  + T+++         R     G A  +  +   +      G+LY 
Sbjct: 119 DLYGYAARVAGTVGVMMTLVMGQRSPDIVARACD-LGCAMQLTNIARDVGEDARAGRLYL 177

Query: 198 PLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-AFI 255
           PL  +   GLD E +L +   + +I+  +K   +       +A   +  +     P  F 
Sbjct: 178 PLSWMREAGLDPEQWLQNPVFNSQIASIVKRLIDTADALYDRATFGIENLPRACRPGIFA 237

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             ++   + +  +  G   VS     +   +   +  
Sbjct: 238 ARALYAEIGREVERSGLDSVSSRAVVSTGRKLAVLAR 274


>gi|299134926|ref|ZP_07028117.1| Squalene/phytoene synthase [Afipia sp. 1NLS2]
 gi|298589903|gb|EFI50107.1| Squalene/phytoene synthase [Afipia sp. 1NLS2]
          Length = 288

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 79/282 (28%), Positives = 140/282 (49%), Gaps = 4/282 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D+ +  + +RD D++RY A L  PP  R  +  LY F+TEL R+RD    P+  ++RL
Sbjct: 9   ADDASYCAQLVRDHDFERYAATLFMPPRARRPVLALYAFNTELRRIRDHVSQPLPGEIRL 68

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           QWW+D+ +   +G +    +P + EL++ V  +DLP      +++A  FD Y+D +    
Sbjct: 69  QWWRDLVDGDARGSV--EANPVAAELMAAVANHDLPRNELSRLVDARVFDLYDDPMLSLD 126

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             E Y    + RL  L+  I       A      +AGIAQ I + +  LP+H  R QLY 
Sbjct: 127 MLERYCDDTAGRLFSLSARI-LGGTSEAVAHAALHAGIAQGIVRAVEGLPLHASRKQLYL 185

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P D+L   G+      +G+++ ++  AI++ AE+   +  KA + +  +  D    F+P+
Sbjct: 186 PQDVLSEAGVKEADIFAGRSTPQLQTAIRVLAEVARSHRGKAADLLIAVPADAKRVFLPL 245

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++    L  A+       +     ++L   W +  ++  + F
Sbjct: 246 ALVRRALDPARMPAQNPFALVPQ-SRLRMLWTLWRATKSEEF 286


>gi|182677990|ref|YP_001832136.1| squalene/phytoene synthase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182633873|gb|ACB94647.1| squalene/phytoene synthase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 295

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 72/289 (24%), Positives = 117/289 (40%), Gaps = 8/289 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D  +    +R  D DR+LA L     +R     LY F+ E+ R R+    PI  ++R 
Sbjct: 5   TEDYTYCEDMVRRDDPDRWLASLFIEQPFRKHAYALYAFNLEIARAREVVTEPILGEIRF 64

Query: 78  QWWKDIFESSTKGLIAES--------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           QWW+DI E                   +P +  +L  + ++ LP + F+ MIEA  FD Y
Sbjct: 65  QWWRDILEPPEGEDNKIESETQGHVMANPVAAAVLDTIERFALPRERFIGMIEARTFDLY 124

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +    + E Y    +  L +L   +L        L   + AG+A  +  L+  LP H
Sbjct: 125 DAPMRTLAELESYGLSTAGSLFYLVASVLSGPETPGLLAAAEPAGLAYGLTGLMRALPWH 184

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RGQ Y P ++L     D E  + G  S  +   +     L  + +    + +  +   
Sbjct: 185 SARGQDYVPCEMLSRHKADLEEIIGGIASPGVFATLAEMRGLARQQISLFEQRIAAVPLK 244

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              AF+PV  T   LK     G+          Q  + W +  +S + R
Sbjct: 245 ARAAFLPVCFTSPYLKQMDKRGYAPFRVPIMLPQWRKQWILWRASKRLR 293


>gi|254704201|ref|ZP_05166029.1| Phytoene synthase [Brucella suis bv. 3 str. 686]
 gi|261754870|ref|ZP_05998579.1| phytoene synthase [Brucella suis bv. 3 str. 686]
 gi|261744623|gb|EEY32549.1| phytoene synthase [Brucella suis bv. 3 str. 686]
          Length = 277

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 81/279 (29%), Positives = 138/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  LR+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++R
Sbjct: 1   MNQNETHCLALLREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +      +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHLVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|6690722|gb|AAF24290.1| CrtB [Rhodobacter sphaeroides]
          Length = 355

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 94/290 (32%), Gaps = 12/290 (4%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-------R 68
           I S D       +R   Y  + A  L P   R     LY F        D A        
Sbjct: 2   IASADLDACREMIRTGSYSFHAASRLLPERVRAPSLALYAFCRVADDAVDEAVNDGQREE 61

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +   +   +   +D  +    G      +P      ++V ++++P      ++E   +D+
Sbjct: 62  DAEVKRRAVLSLRDRLDLVYGGRP--RNAPADRAFAAVVEEFEMPRALPEALLEGLAWDA 119

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
              S         Y+ R+++ +  +  +++         R     G+A  +  +   +  
Sbjct: 120 VGRSYDSFSGVLDYSARVAAAVGAMMCVLMRVRDPDVLARACD-LGLAMQLTNIARDVGT 178

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQ-NSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               G++Y P D +   GL  E FL+     DRI            +   ++   +  + 
Sbjct: 179 DARSGRIYLPRDWMEEEGLPVEEFLARPVVDDRIRAVTHRQLRAADRLYLRSEAGVCGLP 238

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               P       I   +      +G+  V+      +  +  ++  S+ +
Sbjct: 239 LACRPGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQKLVWLGLSATR 288


>gi|15888879|ref|NP_354560.1| phytoene synthase [Agrobacterium tumefaciens str. C58]
 gi|15156647|gb|AAK87345.1| phytoene synthase [Agrobacterium tumefaciens str. C58]
          Length = 281

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 105/282 (37%), Positives = 161/282 (57%), Gaps = 4/282 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + +    L  LRD D DRYLACLLSP   R +L+ LY F+ E+ R+RD+ R  +  ++R+
Sbjct: 4   TENLDVCLATLRDTDRDRYLACLLSPADKRNALAALYAFNAEIARIRDSVREALPGEVRM 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           QWW+D+ +            P +  LL+ +  Y LP     +MIEA  FD Y+D   D  
Sbjct: 64  QWWRDLVDG--NPHGDSQSHPVAAALLTTIEHYRLPRPVLGNMIEARIFDLYDDLFEDRN 121

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             E YA   +S LI LA+++L +E  + S     +AG+AQ +  ++  +P+H  RGQ+Y 
Sbjct: 122 ALEGYAGETASALIQLASLVLSAEDAAHSAEAAGHAGVAQAMAGMLLLMPLHRRRGQVYI 181

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P D+L A GLDRE+FL+GQ+  RI +A++IFA   L ++ KAR     I  ++F A++PV
Sbjct: 182 PADMLAAAGLDRETFLAGQDRQRIGIAVEIFAAHALDHIEKARR--ATISKNLFAAYLPV 239

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +++  V+  A+  G  +       +QL R W +  +S  KRF
Sbjct: 240 ALSGPVIAAARKAGAGVFDGDLQLSQLRRQWLLAKASFLKRF 281


>gi|126734358|ref|ZP_01750105.1| phytoene synthase [Roseobacter sp. CCS2]
 gi|126717224|gb|EBA14088.1| phytoene synthase [Roseobacter sp. CCS2]
          Length = 340

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 97/280 (34%), Gaps = 8/280 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D       +R      + A  L PP  R     LY F        D   +  +  +RLQ
Sbjct: 5   ADLEHCREAIRHGSLSFHAASKLLPPKVRDPALALYAFCRLADDEVDEGDHQASAVLRLQ 64

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
              +  +++  G    +  P      +I+ ++D+P      ++E   +D+          
Sbjct: 65  ---ERLDAAYAGAPKNA--PEDRAFAAIIEEFDMPRALPEALLEGLAWDAAEHRYDTLSG 119

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y+ R++S +  +  +++      A  R     G+A  +  +   +      G++Y P
Sbjct: 120 VRDYSARVASAVGAMMCVLMRVRDPDALARACD-LGVAMQLTNIARDVGEDARMGRIYLP 178

Query: 199 LDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           LD L   G+D  +F+     S  +   +K       +   ++   +  +           
Sbjct: 179 LDWLAEAGIDPINFVREPLPSQDVRRMVKRLLAEANRLYLRSEAGIDVLPLQTRTGIWAA 238

Query: 258 SI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            +    + K  +  G+  +S         +  +++ +S +
Sbjct: 239 RLIYAGIGKQLRRQGYDSISMRARTTGRQKLGWLMQASGR 278


>gi|322369645|ref|ZP_08044209.1| Phytoene synthase [Haladaptatus paucihalophilus DX253]
 gi|320550815|gb|EFW92465.1| Phytoene synthase [Haladaptatus paucihalophilus DX253]
          Length = 316

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 83/278 (29%), Gaps = 9/278 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQWWKD 82
               +      +LA  L P   R     LY F      V D A +    +   RL+  + 
Sbjct: 10  KAIQQQTGKTFHLATRLLPERVRHPTYVLYGFFRICDEVVDDAADVPAEEQAERLESLRK 69

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                          P       +     + ++  +  I+A   D         ++ E Y
Sbjct: 70  Q-----ALGKEPPDDPILEAFHDLCESRGIADEEVVVFIDAMATDIDKSRYETYEELETY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDI 201
               ++ +  + T +++ +    +       G A  +   +  +      R ++Y P   
Sbjct: 125 MRGSAAAVGQMMTSVMNPDDAERARPHATSLGEAFQLTNFLRDVREDIEDRNRIYLPRTT 184

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+  E     + +   +  ++           +    +RY+  D  F   +   + 
Sbjct: 185 LSRHGVTDEQIKRLEFTVGFAEVMQDELRRAEALYREGVAGIRYLPEDCQFAVLLAAVLY 244

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
               +  +   + ++S   +   + +   +  +    R
Sbjct: 245 AEYHRVIRAQRYDVLSKEPSLGTVRKLVLLAKTRWHWR 282


>gi|241204426|ref|YP_002975522.1| Squalene/phytoene synthase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858316|gb|ACS55983.1| Squalene/phytoene synthase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 285

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 113/286 (39%), Positives = 164/286 (57%), Gaps = 3/286 (1%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E   + +    L  LRD D DRYLACLLSP   R +L+ LY F+ EL R+RD    P+ 
Sbjct: 2   TEANIATNQEICLAMLRDSDRDRYLACLLSPEAKRGALAALYAFNAELARIRDLVHEPLP 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            ++RLQ+W D+ E S     + + +P +  LL+ +  + LP +  +DMIEA  FD Y+D 
Sbjct: 62  GEVRLQYWHDLLEGSAH--GSTAANPVAAALLTAIETHRLPRKTLIDMIEARTFDLYDDP 119

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
           +      E YA   +S LI LA+++L  E  + S     +AG+AQ +  L+  +P+H  R
Sbjct: 120 METRLSLEGYAGETASALIQLASLVLSPEEAARSADAAGHAGVAQAVAGLLLLMPVHRRR 179

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           GQ+Y PL IL A GLDR++FL+G++  RIS AI+ FA LG ++L KAR     I P VFP
Sbjct: 180 GQIYVPLQILSATGLDRDAFLAGKDRPRISAAIEAFAGLGREHLAKARAA-GPIAPAVFP 238

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           AF+P ++ E VL  AQ  G  +      P Q  R   M  ++ +++
Sbjct: 239 AFLPATLAEPVLIKAQKRGALLFDRPLQPPQWRRQLRMGLAAARRK 284


>gi|7416799|dbj|BAA94048.1| prephytoene pyrophosphate synthase [Rubrivivax gelatinosus]
          Length = 344

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 90/272 (33%), Gaps = 8/272 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S +       +R      + A LL P   R   + LY F        D + +P      
Sbjct: 7   VSSELQACRELMRGGSKSFFAASLLLPQRVRTPATALYAFCRVADDAVDLSGDPHAAMDE 66

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L   +   ++   G  A   +     L S V +Y +P      ++E   +D+        
Sbjct: 67  L---RTRLDAVYAGTPAPIAA--DRALASTVHRYGVPRVLLDALLEGFLWDADGRRYDTI 121

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y  R++  +     +I+      A  R  +  G+A     +   +      G+LY
Sbjct: 122 ADVEAYGARVAGTVGAAMALIMGVRSPQALARACE-LGVAMQFTNIARDVGEDARNGRLY 180

Query: 197 FPLDILGAVGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            P + L   GLD +++L        ++  ++       +   ++   +  +  D  PA  
Sbjct: 181 LPREWLVEAGLDVDAWLQNPVHCPEVAQTVRRLLRAADELYERSEHGIAALPRDCRPAIR 240

Query: 256 PVSI-TESVLKHAQNHGFKIVSHSHTPNQLVR 286
              +    + +  +  G   V+H        +
Sbjct: 241 AARLVYAEIGRMLERQGLDSVNHRVVVPARRK 272


>gi|254697277|ref|ZP_05159105.1| hypothetical protein Babob28_06054 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260761689|ref|ZP_05874032.1| phytoene synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260672121|gb|EEX58942.1| phytoene synthase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 277

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 81/279 (29%), Positives = 137/279 (49%), Gaps = 2/279 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +++    L  L + D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+   +R
Sbjct: 1   MNQNETHCLALLCEADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGKVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+     +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +   
Sbjct: 61  LQWWRDLINGEAR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y
Sbjct: 119 NDLEGYCGETASALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L A+G+ R+  LS ++      A+ I   L  ++L    +    +   + PAF+P
Sbjct: 179 VPADMLKAIGVTRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +++  + L   +  G +        + + + W M  ++ 
Sbjct: 239 MALVPAYLNAVERLGAQAAQKVADISAIRKQWLMFRANF 277


>gi|225872471|ref|YP_002753926.1| phytoene desaturase [Acidobacterium capsulatum ATCC 51196]
 gi|225792345|gb|ACO32435.1| phytoene desaturase [Acidobacterium capsulatum ATCC 51196]
          Length = 305

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 102/289 (35%), Gaps = 16/289 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR-DM 75
            S          R    + Y + +  P   R ++  +Y F      + D    P+     
Sbjct: 5   VSEAYRICREIARREAKNFYYSFVALPEAKRNAICAVYAFMRHADDLSDDESLPLAARRE 64

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN----- 130
           ++Q W D + S+  G   E   P  + L    +++ +  +    +++    D Y      
Sbjct: 65  KMQAWLDAWHSAAAGAPGE--DPVFLALTDAQQRFGITTELLDQLVQGTAMDLYREEGAA 122

Query: 131 --DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
             D+    +    Y + ++S +  +   I       A   + +  GIA  +  ++  +  
Sbjct: 123 AFDTYATFEDLYRYCYYVASVVGLVCIRIFGYTDPRAEK-LAEETGIAFQLTNILRDVRE 181

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLS----GQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P + + A G+  E   +     Q +      ++  A    +Y       + 
Sbjct: 182 DVERGRIYLPQEDMAAAGVTAEELAALKDGRQLTAGQRALLQKEAARAQQYYRSGYALLP 241

Query: 245 YILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            I PD  PA  + + I   +L+  +   + + S   + +  ++   +  
Sbjct: 242 LISPDARPALGVLIGIYHRLLEQIEARQYDVFSERISVSTPLKLVILSR 290


>gi|239787478|emb|CAX83949.1| Squalene/phytoene synthase [uncultured bacterium]
          Length = 298

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 88/283 (31%), Gaps = 11/283 (3%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
           + +            Y      P   R  L  +Y +   +  V D           L  W
Sbjct: 4   ARYCQEVTLRSGSSFYFPLRFLPARRRRGLYAIYAYCRLVDDVVDQGGEAELARSGLTRW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           ++  E+     +     P + EL      + L  + FLD+++    D    +       E
Sbjct: 64  REQIEAVF---VGRPDHPVAQELAWTRDNFHLAPEPFLDLLDGMTMDLEGWNYETLDDLE 120

Query: 141 HYAFRISSRLIHLA-------TMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            Y  R++  +  +A             E   A  R   + GIA  +  ++  +      G
Sbjct: 121 IYCRRVAVAVGRMALGVLGPDPRCEPPEMLRALDRFAHHLGIAFQLTNILRDVNEDSAMG 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM-RYILPDVFP 252
           +LY P  +L   G+     L+G+ S  +   +    E    +   A   +   +   V P
Sbjct: 181 RLYLPRLLLREAGVAPRQVLAGEWSPGLGRVLTRLGEEAGAHYRAALAAVNGPLRRRVRP 240

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           A    +I  + L      GF+ +          +    L   +
Sbjct: 241 ALAMAAIYHTYLTRMTRQGFRRLGPPIRLGFWTKLGICLGCWL 283


>gi|297197218|ref|ZP_06914615.1| phytoene synthase [Streptomyces sviceus ATCC 29083]
 gi|297146634|gb|EFH28250.1| phytoene synthase [Streptomyces sviceus ATCC 29083]
          Length = 835

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 93/286 (32%), Gaps = 7/286 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +    +      R         +LA  L P   R ++  LY F      + DT    IT
Sbjct: 512 TDPALRQAYTRCRRLNARHGKTYFLATRLLPVARRPAVHALYGFARWADDIVDTLDGTIT 571

Query: 73  RDMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
              R +    +      G    +S  P    L     +Y + +++F D + A   D    
Sbjct: 572 TAERAEQLTLLQHQLEAGLRTGDSAEPVVRALADTALRYAIDHRHFADFMTAMRADLDIT 631

Query: 132 SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                     Y +  +  +   +  ++        +       G+A  +   +  +    
Sbjct: 632 GYATYADLRTYTYGSAEVIGLQMLPVLGTVVPREEAAPHAAALGVAFQLTNFLRDVGEDL 691

Query: 191 HRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P D+L A G+DR        +G+   RI+ A++ F  L      +A   +  +
Sbjct: 692 DRGRVYLPADLLDAHGVDRRLLRWSRATGRPDRRITAALREFERLTRALYREAAPGLAML 751

Query: 247 LPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            P   P       +  ++L      G++ V          R    L
Sbjct: 752 DPVSRPCIRTAFVLYGAILDAVAADGYRSVQRRAVVPGHRRAAVAL 797


>gi|21328641|gb|AAM48647.1| phytoene synthase [uncultured marine proteobacterium]
          Length = 346

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 96/283 (33%), Gaps = 8/283 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           I + D       +R      + A  L P   R     LY F        D  +N     +
Sbjct: 2   IRADDLEHCRNVIRTGSLSFHAASKLLPASVRDPALALYAFCRLADDEVDEGQNKTRAVI 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            LQ   +       G      +P      S+V  +++P      ++E   +D+       
Sbjct: 62  ELQ---ERLALVYAGRP--RNAPEDRAFASVVEDFEMPAALPEALLEGLAWDAMEHRYSS 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 Y  R++S +  +  +++      A  R     G+A  +  +   +      G++
Sbjct: 117 LSDLRGYCARVASAVGAMMCVLMRVRDADALARACD-LGVAMQLTNIARDVGEDARAGRI 175

Query: 196 YFPLDILGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           Y PL+ + A GLD +  LS  + +  +   +K           ++   +  +  +     
Sbjct: 176 YLPLEWIDAEGLDPQQVLSVTEATPELRRMVKKLLSEAHALYVRSEAGVAALPLNARTGI 235

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                I +++ +    + +  ++H     +  +   +  SS++
Sbjct: 236 YAARYIYDAIGQAVARNHYDSITHRGRTTKAQKMALLAKSSLR 278


>gi|304393685|ref|ZP_07375613.1| phytoene synthase [Ahrensia sp. R2A130]
 gi|303294692|gb|EFL89064.1| phytoene synthase [Ahrensia sp. R2A130]
          Length = 352

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 8/261 (3%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
           +   L  +R      + A L+ P   R++ + LY F      + D  R  +    RL   
Sbjct: 25  AAECLDVIRQGSRSFHFASLVLPRDIRMAAASLYAFCRVSDDLVDDPRATLEAAHRL--- 81

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           ++    + +G   +           +V  YD+P    L MIE   +D             
Sbjct: 82  RERLALAYEGRPID--HIADRAFAEVVEAYDIPQSVPLSMIEGFEWDLTGKRYETIGDVI 139

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R++  +  + ++++         R     G+A  +  +   +      G++Y P D
Sbjct: 140 DYGARVAGTVGVMMSLVMHRRSPRTLARACD-LGVAMQLINIARDVGEDARNGRVYLPAD 198

Query: 201 ILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS- 258
            L   GL+ E  + + Q+SD ++  ++   +       +AR     +     P       
Sbjct: 199 WLAEAGLNVEELMKNPQHSDALASVVERLLDEADAIFERARTGFADLPASCRPGIRAAGF 258

Query: 259 ITESVLKHAQNHGFKIVSHSH 279
           +   +    + +GF  V H  
Sbjct: 259 VYAGIGTQVRANGFNSVDHRA 279


>gi|326917914|ref|XP_003205239.1| PREDICTED: UPF0551 protein C8orf38, mitochondrial-like [Meleagris
           gallopavo]
          Length = 275

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 3/275 (1%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            R +R  DY+ +L  LL P   R S   L  F+ EL +++D+     T  MR+Q+W+   
Sbjct: 4   AREIRKRDYEGFLCSLLLPAESRTSAFALRAFNVELAQIKDSITQKTTGLMRMQFWRKAV 63

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E            P +V L   V++++L   +F  +I+    +  + +  + ++ E YA 
Sbjct: 64  EDIYCNNP--PHQPVAVALWRAVKRHNLSKMWFTKIIDEREKNLDDRAYRNIQELEAYAE 121

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
              S L++L   +L  +   A      + G AQ I   +   P H  R +++ P+DI   
Sbjct: 122 NTQSALLYLTLEMLGVKDIHA-DHAASHIGKAQGIVTCLRATPYHCTRRKVFLPMDICML 180

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL 264
            G+ +E F+  +    +   I   A     +L  AR   + +    +PAF      +  L
Sbjct: 181 HGVSQEDFIRCKQEKNVRDVIYDIASQAHIHLEHARSFSKKVPVKAYPAFYHTVALDDYL 240

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            + +   F I   S      + P Y+   + KK +
Sbjct: 241 YNIRKVDFNIFHPSLQKRNTLLPLYLYIRTWKKTY 275


>gi|85703532|ref|ZP_01034636.1| Squalene/phytoene synthase [Roseovarius sp. 217]
 gi|85672460|gb|EAQ27317.1| Squalene/phytoene synthase [Roseovarius sp. 217]
          Length = 349

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 90/279 (32%), Gaps = 8/279 (2%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D       +R      + A  L P   R     LY F        D  R      + L  
Sbjct: 6   DLAHCTEAIRHGSRSFHAASKLLPRRVRDPALALYAFCRLADDAVDENREKAAAVLSL-- 63

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
             +  + +  G      +P      +I+  +D+P      ++E   +D+         + 
Sbjct: 64  -HERLDLAYAGRP--RNAPADRAFAAIIEGFDMPRALPDALLEGLAWDAEGRRYATLSEL 120

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             YA R++S +  +  +++      A  R     G+A  +  +   +      G+LY PL
Sbjct: 121 RAYAARVASAVGAMMCVLMRVRDRDALARACD-LGVAMQLTNIARDVGEDAREGRLYLPL 179

Query: 200 DILGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
           D L   G+  + FL     +      ++           ++   +  +     P      
Sbjct: 180 DWLSEAGMTPDDFLHSTTATPENRRMVRKLLHEADALYNRSESGIAALPLAARPGIFAAR 239

Query: 259 -ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            I   +    +  G+  ++     N   +  +++ + ++
Sbjct: 240 FIYAGIGGRVRAGGYDSITRRARTNGRQKLGWLMLAMLR 278


>gi|46255128|ref|YP_006040.1| phytoene synthase [Thermus thermophilus HB27]
 gi|585011|sp|P37270|CRTB_THET2 RecName: Full=Phytoene synthase
 gi|46197977|gb|AAS82387.1| phytoene synthase [Thermus thermophilus HB27]
          Length = 289

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 93/283 (32%), Gaps = 8/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
              D   +LR LR      YL  LL P   R     +Y          D           
Sbjct: 7   MEPDWKALLRVLRAHSATFYLGSLLFPKEARKGAWAVYAACRLGDEAVDGEGG---GPEA 63

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+ W    E + +      ++ +   L   + ++D+P + FL M E    D     +   
Sbjct: 64  LEAWWAGVERAYR---GRPLAEWEKGLAWALERWDIPFEAFLHMREGFLTDLGPVRLGTE 120

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y ++++  +  +   I    + + +  V    G A  +  ++  +     R ++Y
Sbjct: 121 AELLRYCYQVAGTVGRMMAPIAGGGKEAEARAVK--LGQAMQLTNILRDVGEDLERDRVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PLD+L A G++ E   +G+ +      +            +    + ++        + 
Sbjct: 179 LPLDLLRAHGVEVEDLRAGRVTPGYRALMAHLEGKARALYREGLAGLGHLKVGRAAIALA 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                 +L   +  G+  +          R   +  + +  RF
Sbjct: 239 ALQYRGILDKLRLSGYDNLGRRAHLKAWERALLLPKAFLAARF 281


>gi|40062932|gb|AAR37803.1| phytoene synthase [uncultured marine bacterium 442]
          Length = 365

 Score =  175 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 85/278 (30%), Gaps = 8/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D     + L       ++A  L PP  R     LY F  E   + D   +       L
Sbjct: 14  HTDLAHCRQTLSGGSRSFWVASQLLPPTLRNDACGLYAFCREADDLIDEGDDADAA---L 70

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
               +  +    G   E        L  IV  + LP      ++E   +D+         
Sbjct: 71  AQLHERLDGIYSGAPQERT--VDRVLQRIVIHHQLPRTLLEALLEGFAWDASGRHYHTLS 128

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y  R++  +  +  +++     +A  R     G+A  +  +   +      G+LY 
Sbjct: 129 DVFAYGARVAGVVGVMMAVLMGVRESNALARAAD-LGVAMQLTNIARDVGEDARAGRLYL 187

Query: 198 PLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P  +L   G+D ESFL +   S  +   ++       +   ++   +  +     P    
Sbjct: 188 PRQMLVDAGIDPESFLQAPTFSPALCTVVERLLLEAEQLYRRSESGIALLPVGARPGIYA 247

Query: 257 VS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
              +   +       G   +          +   +L +
Sbjct: 248 ARLLYAEIGHALLKSGGNSIDTRAYIGMAGKARLVLRT 285


>gi|150396395|ref|YP_001326862.1| putative phytoene synthase [Sinorhizobium medicae WSM419]
 gi|150027910|gb|ABR60027.1| putative phytoene synthase protein [Sinorhizobium medicae WSM419]
          Length = 280

 Score =  175 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 111/283 (39%), Positives = 156/283 (55%), Gaps = 3/283 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +    +L  LRD D DRYLACLLSP   R SL+ LY F+ E+ RVRD  + P+  ++R
Sbjct: 1   MQQSDDQILATLRDTDRDRYLACLLSPVEKRHSLAALYAFYAEIARVRDMVKEPLPGEIR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+DI E+           P +  LL  VR++ LP +   DMI+A  FD Y D + D 
Sbjct: 61  LQWWRDILENEKSDGGG---HPLAEALLRCVREHQLPVRVLQDMIDARIFDLYEDPMQDR 117

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E YA   +S LI L+++ILD    + S     +AG+AQ I  L+  LP+H  RGQ+Y
Sbjct: 118 AALEGYAGETASALIQLSSLILDPVNAAESADAAGHAGVAQTIAGLLLLLPVHVGRGQVY 177

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P +IL A GLDRE+ L+  +   +  AI+ F  LG  +L +AR+    I    F AFIP
Sbjct: 178 LPAEILSATGLDREALLAVNDEGAVENAIRAFCGLGRDHLARARKSASSISARNFSAFIP 237

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           V++ E V   A+  G +I+       Q  R W M  +S +++F
Sbjct: 238 VALAEPVFDRAEAAGARILRQPLQAPQWQRQWRMWRASRRRKF 280


>gi|84514967|ref|ZP_01002330.1| Squalene/phytoene synthase [Loktanella vestfoldensis SKA53]
 gi|84511126|gb|EAQ07580.1| Squalene/phytoene synthase [Loktanella vestfoldensis SKA53]
          Length = 340

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 93/283 (32%), Gaps = 8/283 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D       +R      + A  L P   R     LY F        D         +RLQ
Sbjct: 5   DDLAHCENAIRHGSLSFHAASRLLPSSVRDPALALYAFCRLADDEVDEGTQQAGAVLRLQ 64

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
              D  + +  G      +P      +I+  +++P      ++E   +D+          
Sbjct: 65  ---DRLDLAYAGRP--RNAPEDRAFAAIIDAFEMPRALPDALLEGLAWDAAEYRYDTLSG 119

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y+ R++S +  +  +++      A  R     G+A  +  +   +      G++Y P
Sbjct: 120 VRAYSARVASAVGAMMCVLMRVRDPDALARACD-LGVAMQLTNIARDVGEDARMGRIYLP 178

Query: 199 LDILGAVGLDRESF-LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           LD L   G+D  +F         +   +K       +   ++   +  +           
Sbjct: 179 LDWLAEAGIDPLNFTRDPLPDAALRGMVKRLLAEADRLYLRSESGINALPVKARTGIWAA 238

Query: 258 SI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +    + +  + +G+  ++     +   +  ++  S+++  F
Sbjct: 239 RLIYAGIGRQVRQNGYDSITMRARTSVSQKLGWVGQSALRTAF 281


>gi|292493542|ref|YP_003528981.1| squalene synthase HpnD [Nitrosococcus halophilus Nc4]
 gi|291582137|gb|ADE16594.1| squalene synthase HpnD [Nitrosococcus halophilus Nc4]
          Length = 288

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 105/281 (37%), Gaps = 7/281 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
           + +            Y + L  P   R + + LY +  E++ +     +      +LQWW
Sbjct: 4   ATYCQNRATQQGTSLYYSLLFLPEPQRRAATALYAYQKEIVGIVAECSDLGVAQTKLQWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           ++     T+        P +  L + +R Y LP Q FL++IE    D    +    +   
Sbjct: 64  QEEI---TRLFTGHPRHPVTQSLATPIRSYHLPQQSFLEVIEGVSSDLGQWTYPSFQTLI 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  +++  +  +A  I   +      +  K  G+A  +  ++  +     +G++Y P +
Sbjct: 121 SYCQQVAGIISSMAAEIYGYQDPKT-RQYAKNLGVALQLTHILRNIRQDAAQGRIYLPRE 179

Query: 201 ILGAVGLDRESFLSG--QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPV 257
                 +  E  LSG   NS  ++  +   A    +Y   A  E+              +
Sbjct: 180 EFTRFKVPVEDILSGGSDNSQGMATLLAQHASRARQYFHSALAELGQRDYYAQRAGLTQI 239

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           ++  S+L   +  G+ ++    +   L + W    +S + R
Sbjct: 240 ALGLSLLNAIEEEGYPVLKQRISLTPLRKLWIAWRTSHRAR 280


>gi|297683333|ref|XP_002819348.1| PREDICTED: UPF0551 protein C8orf38, mitochondrial-like [Pongo
           abelii]
          Length = 321

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/277 (25%), Positives = 114/277 (41%), Gaps = 15/277 (5%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR  DY+ YL  LL P   R S+  L  F+ EL +V+D+        MR+Q+WK 
Sbjct: 60  YCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKK 119

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             E            P ++EL   V++++L  ++ + +I+    +  + +  + K+ E+Y
Sbjct: 120 TVEDIYCDNP--PHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIKELENY 177

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
           A    S L++L   IL  +   A      + G AQ I   +   P H  R +++ P+DI 
Sbjct: 178 AENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDIC 236

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES 262
                          +      I   A     +L  AR   + +    FPAF+     E 
Sbjct: 237 M------------LGNPISXXXIYDIASQAHLHLKHARSFHKSVPVKAFPAFLQTVSLED 284

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            LK  Q   F I   S      + P Y+   S +K +
Sbjct: 285 FLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY 321


>gi|311895178|dbj|BAJ27586.1| putative phytoene synthase [Kitasatospora setae KM-6054]
          Length = 296

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 84/283 (29%), Gaps = 3/283 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +          +      L P   R+++S LY     +  + D       +   L 
Sbjct: 13  AAYRYCEAVTALQARNFSYGIRLLPEAKRLAMSALYALARRVDDIGDGELPAEQKAEALA 72

Query: 79  WWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             + + +    G + E    P  V L    R++ +P   F ++++    D       +  
Sbjct: 73  RTRVLLDEVRAGEVGEEDTDPIKVALADAARRFPIPLGGFDELVDGVEMDLKGVEYTNYD 132

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           + + Y   ++  +  L+  +   E +          G+A  +  ++  L      G+ Y 
Sbjct: 133 ELKVYCRCVAGSVGRLSLGVYGCEDWERGAEYADTLGLALQLTNILRDLREDALNGRTYL 192

Query: 198 PLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FI 255
           P + L   G  +  +  +       +  +   AE       +    +  +      A   
Sbjct: 193 PTEDLVRFGCQQGFALPALPVGADFTGLVAFEAERAQAAFEEGLRLLPMLDRRSRAATAA 252

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              I   +L         ++    +     + +  LS     R
Sbjct: 253 MAGIYHRLLGRIAADPHAVLRGRVSLPGWEKAYVALSGLAGGR 295


>gi|159040416|ref|YP_001539669.1| squalene/phytoene synthase [Salinispora arenicola CNS-205]
 gi|157919251|gb|ABW00679.1| Squalene/phytoene synthase [Salinispora arenicola CNS-205]
          Length = 303

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 86/276 (31%), Gaps = 9/276 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN--PITRD 74
            +          R   +  YLA  L P   R  +  LY F      + D   +  P  R 
Sbjct: 5   LTAAYNRCRELHRQHGHTYYLATRLLPAWKRRHVHALYGFTRYADEIVDRTEDLPPPRRA 64

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
            RL  W   F +   G   +   P    +L  +  +DL    F   + +   D    S  
Sbjct: 65  ARLDDWAGRFVAGLHGEPVD--DPLLPAVLHTIAVFDLNRDDFASFLGSMAMDLTVSSYR 122

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                  Y    ++ +  +   IL S   +A+    +  G A  +   I  +     RG+
Sbjct: 123 TYGDLLDYMEGSAAVIGTMMLPILGSIDPAAAREPARQLGFAFQLTNFIRDVAEDLDRGR 182

Query: 195 LYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            Y P + L   G+ R+  L    +G+ S+ +   I+        +   A   +  + P  
Sbjct: 183 TYLPDEDLTRFGVTRDDLLAARAAGRTSEPVRELIRYEVARAQAHYAAAAPGVTLLDPAS 242

Query: 251 FPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                   ++   +L       F + +         
Sbjct: 243 QTCIRTAYALYGDILDEVAAQDFDVFARRARVPPRQ 278


>gi|182434758|ref|YP_001822477.1| putative squalene/phytoene synthase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178463274|dbj|BAG17794.1| putative squalene/phytoene synthase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 317

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +          +      L P   R ++S LY F   +  + D   +P T+  R
Sbjct: 16  VQAAYSYCEAVTGQQARNFAYGIRLLPYEKRQAMSALYAFSRRVDDIGDGELDPETKRTR 75

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+  +++ E   K  + E    P +V L    +++ LP     ++I+    D    +   
Sbjct: 76  LESTRELLERIRKEAVDEDDTDPVAVALADAAQRFPLPLGGLDELIDGVLMDVRGATYET 135

Query: 136 CKQFEHYAFRISSRLIHLATMILDS----ERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               + Y   ++  +  L+  +  +         +       G+A  +  ++  +     
Sbjct: 136 WDDLKAYCRCVAGAIGRLSLGVFGTAPGARGAERAAEYADTLGLALQLTNILRDVREDAG 195

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P D L   G        +       +  I            +    +  +    
Sbjct: 196 NGRTYLPADDLAKFGCSAGFHRTTPPPGSDFAGLIHFEVRRARALFAEGYRLLPMLDRRS 255

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 256 GACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGHEKAYVAVR 298


>gi|190891523|ref|YP_001978065.1| phytoene synthase protein [Rhizobium etli CIAT 652]
 gi|190696802|gb|ACE90887.1| phytoene synthase protein [Rhizobium etli CIAT 652]
          Length = 285

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 118/285 (41%), Positives = 167/285 (58%), Gaps = 3/285 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           E+  + +    L  LRD D DRYLACLLSP   R +L+ LY F+ EL RVRD    P+  
Sbjct: 3   EENIATNQDICLAMLRDSDRDRYLACLLSPQDKRGALAALYAFNAELARVRDLVHEPLPG 62

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           ++R+Q+W+D+ E S     + + +P +  LL+ +  + LP Q  +DMIEA  FD Y+D +
Sbjct: 63  EVRMQYWRDLLEGSAH--GSTAANPVAATLLTAIETHRLPRQTLVDMIEARTFDLYDDPM 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                 E YA   +S LI LA+++L  E  S S     +AG+AQ I  L+  +P+H  RG
Sbjct: 121 ETRLSLEGYAGETASALIQLASLVLSPEDASQSADAAGHAGVAQAIAGLLLLMPLHRRRG 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           QLY PL IL A GLDR++FL+G++  RIS AI+ FA LG ++L KAR     I P VFPA
Sbjct: 181 QLYIPLQILSATGLDRDTFLAGEDRPRISAAIEAFAGLGREHLAKAR-GAGPIAPAVFPA 239

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           F+PV++ E VL+ AQ  G  +      P Q  R   M  +  +++
Sbjct: 240 FLPVTLAEPVLRKAQRRGALLFDRPLQPPQWRRQLAMALAVSRRK 284


>gi|289583597|ref|YP_003482007.1| Phytoene synthase [Natrialba magadii ATCC 43099]
 gi|289533095|gb|ADD07445.1| Phytoene synthase [Natrialba magadii ATCC 43099]
          Length = 326

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 90/280 (32%), Gaps = 7/280 (2%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           DS       +      YLA    P   R +   LY F      V D A      + R + 
Sbjct: 9   DSDKAKAIQKRTGKTFYLATRFLPSRVRHATHVLYGFFRIADEVVDDAAGMPPAEQRAEL 68

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
                ++  +    ++  P       +    ++ ++     I+A   D          Q 
Sbjct: 69  ESLRAQALGE---VDADDPVLAAFAELKDAAEITDEEVDVFIDAMASDITTSRYETYAQL 125

Query: 140 EHYAFRISSRLIHLATMILDSER--YSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLY 196
           E Y    ++ +  + T I+D E    +A+L      G A  +   +  +      R ++Y
Sbjct: 126 ESYMRGSAAAVGVMMTAIMDMEPELEAAALPHAIALGEAFQLTNFLRDVREDIVERDRIY 185

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            P   L   G+        ++S      ++   +   +   +    ++Y+  D   P  +
Sbjct: 186 LPQRTLEKHGVSETQIERLEHSHSFESVMREELQRAEERYREGVAGIQYLPDDCQLPVLL 245

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              +        +   + +++ + + +   +   ++ +  
Sbjct: 246 AAVLYAEHHAIIRAQEYDVLTSAPSLSTARKLRCLVRTRW 285


>gi|110677533|ref|YP_680540.1| phytoene synthase [Roseobacter denitrificans OCh 114]
 gi|109453649|gb|ABG29854.1| phytoene synthase [Roseobacter denitrificans OCh 114]
          Length = 339

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 95/277 (34%), Gaps = 8/277 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           I   D       +R      + A  L P   R     LY F        D  ++ +   +
Sbjct: 2   IAPADMEHCREAIRHGSLSFHAASKLLPAHVRDPALALYAFCRLADDEVDLKQDKVASVL 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RL   +D  +    G   ++  P      +IV ++++P      ++E   +D+       
Sbjct: 62  RL---RDRLDQVYAGRPKDA--PTDRAFAAIVEEFEMPRALPDALLEGLAWDAAERRYDT 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
               + Y+ R++S +  +  +++      A  R     G+A  +  +   +       ++
Sbjct: 117 LSGVKDYSARVASAVGAMMCVLMRVRDADALARACD-LGVAMQLTNIARDVGEDALERRI 175

Query: 196 YFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           Y PL+ L   G++ E F +  + +  +   +K       +   ++   +  +     P  
Sbjct: 176 YLPLEWLEDAGIEVEVFFADPRATKAVRGMVKRLVMEANRLYMRSEAGVGALPRGCRPGI 235

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                I   +       G+  +S     N+  +  ++
Sbjct: 236 YGARFIYAGIGGQLTRMGYDSISARARTNKWQKIGWL 272


>gi|146277072|ref|YP_001167231.1| squalene/phytoene synthase [Rhodobacter sphaeroides ATCC 17025]
 gi|145555313|gb|ABP69926.1| phytoene synthase [Rhodobacter sphaeroides ATCC 17025]
          Length = 354

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 100/289 (34%), Gaps = 11/289 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA------RN 69
           I + D       +R   Y  + A  L P   R     LY F        D A       +
Sbjct: 2   IATADLDACRELIRTGSYSFHAASRLLPEKVRAPSLALYAFCRVADDAVDEAVNEGQQED 61

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
              +   +   +D  +    G      +P      ++V ++++P      ++E   +D+ 
Sbjct: 62  AEAKRRAVLSLRDRLDLVYAGRP--RNAPADRAFAAVVEEFEMPRTLPEALLEGLAWDAV 119

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
             S         Y+ R+++ +  +  +++         R     G+A  +  +   +   
Sbjct: 120 GKSYDTFSGVLDYSARVAAAVGAMMCVLMRVRDPDVLARACD-LGLAMQLTNIARDVGTD 178

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILP 248
              G++Y P + +   GL  E FL+   + DRI    +       +  +++   +  +  
Sbjct: 179 ARSGRIYLPREWMEEAGLPVEEFLANPVACDRIRAVTRRLLRAADRLYYRSESGVCGLPL 238

Query: 249 DVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              P       I  ++ +    +G+  V+     N+  +  ++  S+ +
Sbjct: 239 ACRPGIYAARHIYAAIGREIARNGYDSVTRRAFTNKRQKLVWLAVSATR 287


>gi|312196189|ref|YP_004016250.1| phytoene synthase [Frankia sp. EuI1c]
 gi|311227525|gb|ADP80380.1| Phytoene synthase [Frankia sp. EuI1c]
          Length = 337

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 92/310 (29%), Gaps = 28/310 (9%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +    R      R   +     YLA LL P   R  +  LY F      + D+  + +  
Sbjct: 18  DPELRRSYAAARRLNAEHGRTYYLATLLLPAWKRPYVHALYGFARYADDIVDSLDSQLPA 77

Query: 74  DMRLQWWKDI--------------------------FESSTKGLIAESISPFSVELLSIV 107
             R  W  D                              +    +  S       +L  +
Sbjct: 78  AERAAWLADWGGRLIDALRQGTAGEDPTGPAGSGGGGHDALARPLYRSDVSVLPAVLHTI 137

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL 167
           R++D+P  +F   + +   D              Y +   + +      +L+    +A+ 
Sbjct: 138 RRWDVPVDHFEAFLASMAMDLTITGYDTFDDLMTYVYGSGTVIGLQMLPVLEPSSAAAAP 197

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +   +  +     RG++Y P + +   G+ RE   +G     +   ++ 
Sbjct: 198 YAGD-LGTAFQLINFLRDVGEDLRRGRVYLPRESMELFGVTRERLATGVVDGAVRRLLRH 256

Query: 228 FAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
                 + L  A   +R + P           +   +L   +   ++++          R
Sbjct: 257 EVGRAKEILRAAAPGVRLLHPTSRDCVRTAARLYGGILDEIEKADYQVLDRRVAVGTPRR 316

Query: 287 PWYMLSSSIK 296
                ++ ++
Sbjct: 317 LGVAGAALLR 326


>gi|116251817|ref|YP_767655.1| phytoene synthase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256465|emb|CAK07549.1| putative phytoene synthase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 280

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 3/282 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            + +    L  LRD D DRYLACLLSP   R +L+ LY F+ EL R+RD    P+  ++R
Sbjct: 1   MATNQEICLAMLRDSDRDRYLACLLSPEEKRGALAALYAFNAELARIRDLVHEPLPGEVR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQ+W D+ E S     + + +P +  LL  +  + LP +  +DMIEA  FD Y+D +   
Sbjct: 61  LQYWHDLLEGSAH--GSTAANPVAAALLIAIETHRLPRKTLIDMIEARTFDLYDDPMETR 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E YA   +S LI LA+++L  E  + S     +AG+AQ +  L+  +P+H  RGQ+Y
Sbjct: 119 LSLEGYAGETASALIQLASLVLSPEEAARSADAAGHAGVAQAVAGLLLLMPLHRRRGQIY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PL IL A GLDR++FL+G++  RIS AI+ FA LG ++L KAR     I P VFPAF+P
Sbjct: 179 IPLQILSATGLDRDAFLAGEDRPRISAAIEAFAGLGREHLAKARAA-GPIAPAVFPAFLP 237

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++ E VL  AQ  G  ++     P Q  R   M  ++ +++
Sbjct: 238 ATLAEPVLIKAQKRGALLLDRPLQPPQWRRQLRMGLAAARRK 279


>gi|300710556|ref|YP_003736370.1| Phytoene synthase [Halalkalicoccus jeotgali B3]
 gi|299124239|gb|ADJ14578.1| Phytoene synthase [Halalkalicoccus jeotgali B3]
          Length = 319

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 94/279 (33%), Gaps = 9/279 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQWWKD 82
               R      Y A  L P   R +   LY F      V D A    P  +   L+  +D
Sbjct: 14  KAIHRRTGRTFYYATRLLPGRVREATYVLYAFFRIADEVVDDAAGTPPEEQRRELESLRD 73

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                      +   P      ++ R++D+ ++     IEA   D          + E Y
Sbjct: 74  Q-----ALGRTDPEGPVLEAFRTVKRRHDIADEDVETFIEAMLTDIDTRRYETYAELEAY 128

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDI 201
               ++ +  + T I+D +    +L      G A  +   +  +      R ++Y P   
Sbjct: 129 MNGSAAAVGRMMTAIMDPDDPENALSHATALGEAFQLTNFVRDVREDVIERDRIYLPQST 188

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L   G+        + ++ ++ A++I          +    ++Y+  D   P  +   + 
Sbjct: 189 LAECGVSDGRIERFEMNEDVASAVRIELSRAESLYREGVAGIKYLPKDCQLPVLLAAVLY 248

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               +  ++  + ++++    + L + W +       ++
Sbjct: 249 AEHHRLIRDCEYDVLTNEPELSTLRKLWIVARVRWYWQW 287


>gi|109390037|gb|ABG29737.1| phytoene synthase 2-B1 [Triticum turgidum subsp. durum]
          Length = 247

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 86/252 (34%), Gaps = 8/252 (3%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
            +     YL   L  P  R ++  +Y +      + D   +       L  W+   E   
Sbjct: 2   EEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKRLEDLF 61

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +         +   L     ++ +  Q F DMIE    D +        +   Y + ++ 
Sbjct: 62  E---GRPYDMYDAALSDTASKFPIDIQPFRDMIEGMRLDLWKSRYRTFDELYLYCYYVAG 118

Query: 149 RLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
            +  +   ++  +    AS   +  A +A  I   +        RG++Y PLD L   GL
Sbjct: 119 TVGLMTVPVMGIAPDSKASAESVYNAALALGIANQLT---EDSRRGRIYLPLDELAQAGL 175

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKH 266
             E    G+ +D+    +K   +    +  +A + + ++      P    + +   +L  
Sbjct: 176 TEEDIFRGKVTDKWRRFMKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDA 235

Query: 267 AQNHGFKIVSHS 278
            + + +   +  
Sbjct: 236 IETNDYNNFTKR 247


>gi|256783792|ref|ZP_05522223.1| phytoene synthase [Streptomyces lividans TK24]
 gi|289767674|ref|ZP_06527052.1| squalene synthase HpnD [Streptomyces lividans TK24]
 gi|289697873|gb|EFD65302.1| squalene synthase HpnD [Streptomyces lividans TK24]
          Length = 316

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 80/281 (28%), Gaps = 7/281 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +          +      L P   R ++S LY F   +  + D       +  RL 
Sbjct: 17  AAYSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDIGDGVLADDVKVTRLD 76

Query: 79  WWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             + +      G + E    P +V L    R++ +P     ++I+    D   ++     
Sbjct: 77  ETRAVLARIQDGAVEEDDTDPVAVALADAARRFPIPLGGLDELIDGVQMDLRGETYETWD 136

Query: 138 QFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
             + Y   ++  +  L+  +  +E        +       G+A  +  ++  +      G
Sbjct: 137 DLKVYCRCVAGAIGRLSLGVFGTEPGARGAERAPEYADTLGLALQLTNILRDVREDAEGG 196

Query: 194 QLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           + Y P D L   G     +  +       +  +            +    +  +      
Sbjct: 197 RTYLPADDLAKFGCAAGFNGPTPPEGSDFAGLVHFEVRRARALFAEGYRLLPMLDRRSGA 256

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                  I   +L   +     ++    +     + +  + 
Sbjct: 257 CVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGREKAYVAVR 297


>gi|119504130|ref|ZP_01626211.1| Squalene/phytoene synthase [marine gamma proteobacterium HTCC2080]
 gi|119460133|gb|EAW41227.1| Squalene/phytoene synthase [marine gamma proteobacterium HTCC2080]
          Length = 365

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 85/278 (30%), Gaps = 8/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D     + L       ++A  L PP  R     LY F  E   + D   +       L
Sbjct: 14  HTDLAHCRQTLSGGSRSFWVASQLLPPTLRNDACGLYAFCREADDLIDEGDDADAA---L 70

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
               +  +    G   E        L  IV  + LP      ++E   +D+         
Sbjct: 71  AQLHERLDGIYSGASQERT--VDRVLQRIVIHHQLPRTLLEALLEGFAWDASGRHYHTLS 128

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y  R++  +  +  +++     +A  R     G+A  +  +   +      G+LY 
Sbjct: 129 DVFAYGARVAGVVGVMMAVLMGVRESNALARAAD-LGVAMQLTNIARDVGEDARAGRLYL 187

Query: 198 PLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P  +L   G+D ESFL +   S  +   ++       +   ++   +  +     P    
Sbjct: 188 PRQMLVDAGIDPESFLQAPTFSPALCTVVERLLLEAEQLYRRSESGIALLPVGARPGIYA 247

Query: 257 VS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
              +   +       G   +          +   +L +
Sbjct: 248 ARLLYAEIGHALLKSGGNSIDTRAYIGMAGKARLVLRT 285


>gi|222085796|ref|YP_002544326.1| phytoene synthase protein [Agrobacterium radiobacter K84]
 gi|221723244|gb|ACM26400.1| phytoene synthase protein [Agrobacterium radiobacter K84]
          Length = 286

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 117/279 (41%), Positives = 168/279 (60%), Gaps = 3/279 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           +    L  LRD D DRYLACLL+P   R +L+ LY F+ EL R+RD    P+  ++R+Q+
Sbjct: 10  NQDLCLATLRDTDRDRYLACLLAPEDKRGALAALYAFNAELARIRDLVHEPLPGEVRMQY 69

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D+ E       + + +P + ELL+ + QY LP Q  +DMI+A  FD Y+D +      
Sbjct: 70  WRDLLEGQAH--GSSAANPVAAELLTTIDQYRLPTQTLIDMIDARIFDLYDDPMETRGTL 127

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E YA   +S LI LA+++L +E    S     +AG+AQ I  L+  +P+H  RGQLY PL
Sbjct: 128 EGYAGETASALIQLASLVLSAEDARRSADAAGHAGLAQAIAGLLLLMPLHRRRGQLYLPL 187

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
           +IL A GLDR++FL+G++  RIS AI+ FA LG ++L KAR     I P VFPAF+PV +
Sbjct: 188 EILTATGLDRDTFLAGEDKLRISAAIEAFAGLGREHLAKARA-TGSISPAVFPAFLPVVL 246

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            E VLK AQ  G ++   +  P Q  R   M  +++ K+
Sbjct: 247 AEPVLKRAQKLGARVFDQAFQPPQWRRQMRMALAAMTKK 285


>gi|309790431|ref|ZP_07684993.1| squalene/phytoene synthase [Oscillochloris trichoides DG6]
 gi|308227544|gb|EFO81210.1| squalene/phytoene synthase [Oscillochloris trichoides DG6]
          Length = 320

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 87/287 (30%), Gaps = 9/287 (3%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             +  +  +    +  + +R+     +L+    P   R ++   Y F             
Sbjct: 37  PPQPPQRIAEAYRYCDQVIREHSKSFFLSTQFLPLAKRRAVRAFYAFCRVT--DDTVDAA 94

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                  L  W     S        +  P  +        Y+L   +  +++     D  
Sbjct: 95  TDDPVRTLAEWVQRVRSP----QMAADDPVLLAWHDTRTTYNLSAAWVDELLAGMAMDLT 150

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
            +          Y +R++S +  ++  +  +   +A   +    G+A  +  ++  +   
Sbjct: 151 INRYTSFADLWLYCYRVASVVGLISMQVTGAAPGAAPYAIK--LGVALQMTNILRDVGED 208

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y PL+ L   GL  +  L+    +R    ++   E   +   ++   +  +  D
Sbjct: 209 VKRGRVYLPLEDLERFGLSYDDILNRVYDERFRAMMRFQVERTYQLYDESWAGIGLLPQD 268

Query: 250 VF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                     +   +L +   H +   S         +   +     
Sbjct: 269 SRFSVAAAARVYRGILDNLVAHNYDSYSRRAYLTFHEKLARLPRLWF 315


>gi|322435260|ref|YP_004217472.1| squalene synthase HpnC [Acidobacterium sp. MP5ACTX9]
 gi|321162987|gb|ADW68692.1| squalene synthase HpnC [Acidobacterium sp. MP5ACTX9]
          Length = 315

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 85/279 (30%), Gaps = 3/279 (1%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                  +          + ++A    P   R     +Y F      + D   +  T   
Sbjct: 23  TLEEAQAWCRHLATSHYENFHVATWFLPKRIRPYFESIYAFSRTADDLGDEVADKDTATR 82

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+ + +   +     S+ P  V L   + +  +P Q F D+I A   D        
Sbjct: 83  LLTTWEQMLDECYE-APERSVHPVFVALRKTIDETQVPKQLFADLIHAFLQDQLMTHYES 141

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            +    Y+   ++ +  L   +           +      A  +      +   + RG+ 
Sbjct: 142 MEGLLGYSKLSANPVGRLVLWVSGYHD-EERALLSDKVCTALQLINFWQDVVEDWERGRR 200

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF- 254
           Y P+  +   G+        + +   +  +   A    + L +       +  ++     
Sbjct: 201 YLPIAEMQRFGVVDCLIAERRFTPEFAAMMTYLAGYAGEMLKQGGAVSGTVDRELGVTLK 260

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           + V   E+ L      G+ ++    + +++ +   +  +
Sbjct: 261 LFVKGGEAALGGIVAQGYDVLRARPSVSKMTKMKLLGGA 299


>gi|326775275|ref|ZP_08234540.1| squalene synthase HpnD [Streptomyces cf. griseus XylebKG-1]
 gi|326655608|gb|EGE40454.1| squalene synthase HpnD [Streptomyces cf. griseus XylebKG-1]
          Length = 317

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +          +      L P   R ++S LY F   +  + D   +P T+  R
Sbjct: 16  VQAAYSYCEAVTGQQARNFAYGIRLLPYEKRQAMSALYAFSRRVDDIGDGELDPETKRTR 75

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+  +++ E   K  + E    P +V L    +++ LP     ++I+    D    +   
Sbjct: 76  LESTRELLERIRKDAVDEDDTDPVAVALADAAQRFPLPLGGLDELIDGVLMDVRGATYET 135

Query: 136 CKQFEHYAFRISSRLIHLATMILDS----ERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               + Y   ++  +  L+  +  +         +       G+A  +  ++  +     
Sbjct: 136 WDDLKAYCRCVAGAIGRLSLGVFGTAPGARGAERAAEYADTLGLALQLTNILRDVREDAG 195

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P D L   G        +       +  I            +    +  +    
Sbjct: 196 NGRTYLPTDDLAKFGCSAGFHRTTPPPGSDFAGLIHFEVRRARALFAEGYRLLPMLDRRS 255

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 256 GACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGHEKAYVAVR 298


>gi|296171236|ref|ZP_06852640.1| phytoene synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894204|gb|EFG73961.1| phytoene synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 318

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 91/295 (30%), Gaps = 10/295 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           E+                     +LA  L  P  R ++  LY F      + D     + 
Sbjct: 12  EDPRLREGYRRCRELNAAHGRTFFLATRLLAPDQRPAVHALYGFARYADDILDDLDPHLR 71

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            D+R Q  +++ +            P    +    R+Y + +  F D + +   D     
Sbjct: 72  TDIRAQRLQELADRFFS-AGDHLDDPVLAAVTDTARRYRIGSDLFDDFLTSMRMDLTVTD 130

Query: 133 IFDCKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
             D      Y    +  +      ++        +       G A  +   +  +     
Sbjct: 131 YPDRAALNLYMRGSAEAIGLQVLPVLGTVVPVEEAAPYAAALGRAFQLTNFLRDIDEDLL 190

Query: 192 RGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           R ++Y P D L A G+DRE         +   R+  A+    ++  +    A   +  + 
Sbjct: 191 RHRVYLPADELAAHGVDRELLTWCHQHRRTDPRVRKALAAQHQITRETYRFADAGIAMLS 250

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM---LSSSIKKR 298
           P   P     S +   +L   +  GF + +H  T  +  R       L  S + R
Sbjct: 251 PRSQPCVAAASTLYSEILDRIEESGFAVFNHRATVGKARRLQVAGIGLLRSWRAR 305


>gi|239945639|ref|ZP_04697576.1| putative squalene/phytoene synthase [Streptomyces roseosporus NRRL
           15998]
 gi|239992109|ref|ZP_04712773.1| putative squalene/phytoene synthase [Streptomyces roseosporus NRRL
           11379]
          Length = 317

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 82/283 (28%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +          +      L P   R ++S LY F   +  + D   +  T+  R
Sbjct: 16  VQAAYSYCEAVTGQQARNFAYGIRLLPNEKRQAMSALYAFSRRVDDIGDGELDAGTKRTR 75

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+  +++ +    G + E    P +V L    R++ LP     ++I+    D    +   
Sbjct: 76  LESTRELLDRVRHGKVEEDDTDPVAVALADAARRFPLPLGGLDELIDGVLMDVRGATYET 135

Query: 136 CKQFEHYAFRISSRLIHLATMILDS----ERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               + Y   ++  +  L+  +  +         +       G+A  +  ++  +     
Sbjct: 136 WDDLKTYCRCVAGAIGRLSLGVFGTAPGARGAERAAEYADTLGLALQLTNILRDVREDAG 195

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P D L   G        +       +  I            +    +  +    
Sbjct: 196 NGRTYLPADDLAKFGCSAGFHRTTPPPGSDFAGLIHFEVRRARALFAEGYRLLPMLDRRS 255

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 256 GACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGHEKAYVAVR 298


>gi|83591834|ref|YP_425586.1| phytoene synthase [Rhodospirillum rubrum ATCC 11170]
 gi|83574748|gb|ABC21299.1| phytoene synthase [Rhodospirillum rubrum ATCC 11170]
          Length = 342

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 85/264 (32%), Gaps = 8/264 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D  +  + +R      + A LL P   R     LY F        D           L
Sbjct: 6   ADDYEYCRKLIRTGSRTFHAASLLLPAKLRDPAYALYAFCRVSDDAVDAPDAHRNAIAVL 65

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
               D  + +  G       P        V ++ +P      ++E   +D          
Sbjct: 66  ---TDRLDRAYAGRPLPL--PCDRAFADTVSRFSIPRALPEALLEGMEWDLEGRQCPSLS 120

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             + Y+ R++  +  + T+++      A L      G+A     +   +      G+LY 
Sbjct: 121 DLQAYSARVAGTVGAMMTVLMGVRE-PAVLARACDLGVAMQFTNIARDVGEDARNGRLYL 179

Query: 198 PLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P D L   G+D   +L+  + +  ++  ++   +   +   +A   +  +     PA   
Sbjct: 180 PHDWLREAGIDPAIWLADPRFTPELAGVVRRLLDEADQLYRRAITGISGLPASCRPAIRA 239

Query: 257 V-SITESVLKHAQNHGFKIVSHSH 279
              +   + +  +   F  +S   
Sbjct: 240 ACDLYAEIGREVERAKFDSISRRA 263


>gi|319406033|emb|CBI79663.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 286

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 3/278 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR+ D DRY++ L +P   R +L+ LY F+ E+ R+R++ R+P+  ++RL+WW+D
Sbjct: 7   YCLDILRNTDRDRYISVLFAPKQKRRALAALYAFNAEVARIRESVRDPLIGEIRLRWWRD 66

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
              +  +  I    +P   +LL  +  + L    FL   +A  FD YN+ I     FE Y
Sbjct: 67  SIANDERQNI--ESNPILNDLLKTITLFKLSKTAFLQYCDARIFDLYNNPIITIHDFETY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             + +S ++HL+  ILD +         KY GIAQ +  ++  LP+   R Q YFP D+L
Sbjct: 125 CSKTASTILHLSCQILDFDVAPNFTDACKYGGIAQALSGILRLLPLMQSRYQCYFPNDML 184

Query: 203 GAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
             +G+ RE   S   N ++    I+    L   Y  K       +   + PAF+P+++T 
Sbjct: 185 KVLGMSREELDSDCINDEQKQRIIEAMVALSRDYYLKFYGHSVILPKTLKPAFLPLAVTP 244

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + L+     G K+   + T   L R W +  ++I   F
Sbjct: 245 ASLQKIAQLGAKVFRENATSLLLHRYWLITKTAISGNF 282


>gi|560637|gb|AAB31139.1| phytoene synthase [Rhodobacter sphaeroides]
 gi|4490590|emb|CAB38740.1| phytoene synthase [Rhodobacter sphaeroides]
          Length = 355

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 94/290 (32%), Gaps = 12/290 (4%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-------R 68
           I S D       +R   Y  + A  L P   R     LY F        D A        
Sbjct: 2   IASADLDACREMIRTGSYSFHAASRLLPERVRAPSLALYAFCRVADDAVDEAVNDGQREE 61

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +   +   +   +D  +    G      +P      ++V ++++P      ++E   +D+
Sbjct: 62  DAEVKRRAVLSLRDRLDLVYGGRP--RNAPADRAFAAVVEEFEMPRALPEALLEGLAWDA 119

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
              S         Y+ R+++ +  +  +++         R     G+A  +  +   +  
Sbjct: 120 VGRSYDSFSGVLDYSARVAAAVGAMMCVLMRVRDPDVLARACD-LGLAMQLTNIARDVGT 178

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQ-NSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               G++Y P D +   GL  E FL+     DRI            +   ++   +  + 
Sbjct: 179 DARSGRIYLPRDWMEEEGLPVEEFLARPVVDDRIRAVTHRLLRAADRLYLRSEAGVCGLP 238

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               P       I   +      +G+  V+      +  +  ++  SS +
Sbjct: 239 LACRPGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQKLVWLGLSSTR 288


>gi|134100863|ref|YP_001106524.1| putative squalene/phytoene synthase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133913486|emb|CAM03599.1| putative squalene/phytoene synthase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 297

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 88/281 (31%), Gaps = 8/281 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    R   +   +      L P   R +LS +Y F   +  + D       +  R
Sbjct: 15  IREAYAECERITGEQARNFSYGIRLLPGPKRRALSAVYAFARRVDDIGDGDLPCEEKLRR 74

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+  +    S+      +S  P  V L +  ++  +P   F ++I+    D    +    
Sbjct: 75  LKQARVAVHSA----TVDSSDPVVVALAATAQRMPIPLSAFDELIDGCESDVRGATYDTF 130

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +  HY   ++  +  L+  +  +   + +       G+A  +  ++  +   +  G++Y
Sbjct: 131 AELVHYCRCVAGSVGRLSLGVFGAADSAEARPRADALGVALQLTNILRDVREDFGNGRVY 190

Query: 197 FPLDILGAVGLDRESFLSGQ---NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP- 252
            P   L   G+  E+   G    +    +  I+  A+    +       +  +       
Sbjct: 191 LPAADLERFGVGMEADRRGDLRIDEPGWNALIEYQAQRAELWYAVGLGLLPLLDRRSRAC 250

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                 I   +L        + +S   +     +      S
Sbjct: 251 CAAMAGIYHELLHRIAAEPHQALSGRMSLPAWKKAGVAARS 291


>gi|149203765|ref|ZP_01880734.1| Squalene/phytoene synthase [Roseovarius sp. TM1035]
 gi|149142882|gb|EDM30924.1| Squalene/phytoene synthase [Roseovarius sp. TM1035]
          Length = 349

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 91/283 (32%), Gaps = 8/283 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           I  +D       +R      + A  L P   R     LY F        D  R      +
Sbjct: 2   IAPQDLAHCTEAIRHGSRSFHAASKLLPRRVRDPALALYAFCRLADDAVDENREKAAAVL 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L    +  +    G      +P      +I+  +D+P      ++E   +D+       
Sbjct: 62  SL---HERLDLVYAGRP--RNAPADRAFAAIIDGFDMPRALPEALLEGLAWDAEGRRYET 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
             +   Y+ R++S +  +  +++      A  R     G+A  +  +   +      G+L
Sbjct: 117 LSELRAYSARVASAVGAMMCVLMRMRERDALARACD-LGVAMQLTNIARDVGEDAREGRL 175

Query: 196 YFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           Y PL+ L   G+  E+FL        +   ++           ++   +  +     P  
Sbjct: 176 YLPLEWLSEAGMTPETFLRAPAPDAEVRRMVRRLLMEADTLYARSEAGIAVLPLSARPGI 235

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                I   +    +  G   ++     N   +  +++ + ++
Sbjct: 236 YAARYIYAGIGAQVRGAGHDSITRRARTNSTQKLGWLMLALLR 278


>gi|224477756|ref|YP_002635362.1| squalene synthase-like protein [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422363|emb|CAL29177.1| similar to squalene synthase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 287

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 91/290 (31%), Gaps = 12/290 (4%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           E+  + D  +    + +     + A    P   R ++  +Y     +    D   NP   
Sbjct: 2   EQTVNEDYEYCKHIMEEYSKTFFYAFNNLPENERKAVWAIYAVCRMIDDSIDEYENP--- 58

Query: 74  DMRLQWWKDIFESSTKGLIA----ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
             RL+  +D  ++            S +         ++ Y +P   F+ +++    D  
Sbjct: 59  -ERLKAIRDDLDAIYSKQSEMRQFNSDAHVMRAFRDTLQFYPVPQHAFVTLMDYVEQDLT 117

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATM-ILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
             ++   +    Y + ++  +  L T  + + +    +  V    G A  I  ++  +  
Sbjct: 118 MTTLPTDQALYAYCYGVAGTIGELLTPVLAEPQYRETADAVGIELGKALQITNILRDVGE 177

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            Y   ++Y   + L    +D E       +       + +A         A   + Y  P
Sbjct: 178 DYENDRVYLSAERLEKYHVDLEEVFHKGVTQNYIDLWESYARDADDMYEHALNNLHYFYP 237

Query: 249 DVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
              P   +       +L   +   +  +      N+L +   +    +K 
Sbjct: 238 KARPIIELAAVAYREILPVVRKQKY-SLHKRAYVNRLKK-GRIYRRVMKN 285


>gi|77463840|ref|YP_353344.1| phytoene synthase [Rhodobacter sphaeroides 2.4.1]
 gi|85683252|sp|P54905|CRTB_RHOS4 RecName: Full=Phytoene synthase
 gi|77388258|gb|ABA79443.1| phytoene synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 355

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 94/290 (32%), Gaps = 12/290 (4%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-------R 68
           I S D       +R   Y  + A  L P   R     LY F        D A        
Sbjct: 2   IASADLDACREMIRTGSYSFHAASRLLPERVRAPSLALYAFCRVADDAVDEAVNDGQREE 61

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +   +   +   +D  +    G      +P      ++V ++++P      ++E   +D+
Sbjct: 62  DAEVKRRAVLSLRDRLDLVYGGRP--RNAPADRAFAAVVEEFEMPRALPEALLEGLAWDA 119

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
              S         Y+ R+++ +  +  +++         R     G+A  +  +   +  
Sbjct: 120 VGRSYDSFSGVLDYSARVAAAVGAMMCVLMRVRDPDVLARACD-LGLAMQLTNIARDVGT 178

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQ-NSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               G++Y P D +   GL  E FL+     DRI            +   ++   +  + 
Sbjct: 179 DARSGRIYLPRDWMEEEGLPVEEFLARPVVDDRIRAVTHRLLRAADRLYLRSEAGVCGLP 238

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               P       I   +      +G+  V+      +  +  ++  S+ +
Sbjct: 239 LACRPGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQKLVWLGLSATR 288


>gi|291449097|ref|ZP_06588487.1| squalene/phytoene synthase [Streptomyces roseosporus NRRL 15998]
 gi|291352044|gb|EFE78948.1| squalene/phytoene synthase [Streptomyces roseosporus NRRL 15998]
          Length = 313

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 82/283 (28%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +          +      L P   R ++S LY F   +  + D   +  T+  R
Sbjct: 12  VQAAYSYCEAVTGQQARNFAYGIRLLPNEKRQAMSALYAFSRRVDDIGDGELDAGTKRTR 71

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+  +++ +    G + E    P +V L    R++ LP     ++I+    D    +   
Sbjct: 72  LESTRELLDRVRHGKVEEDDTDPVAVALADAARRFPLPLGGLDELIDGVLMDVRGATYET 131

Query: 136 CKQFEHYAFRISSRLIHLATMILDS----ERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               + Y   ++  +  L+  +  +         +       G+A  +  ++  +     
Sbjct: 132 WDDLKTYCRCVAGAIGRLSLGVFGTAPGARGAERAAEYADTLGLALQLTNILRDVREDAG 191

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P D L   G        +       +  I            +    +  +    
Sbjct: 192 NGRTYLPADDLAKFGCSAGFHRTTPPPGSDFAGLIHFEVRRARALFAEGYRLLPMLDRRS 251

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 252 GACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGHEKAYVAVR 294


>gi|221639695|ref|YP_002525957.1| Phytoene synthase CrtB [Rhodobacter sphaeroides KD131]
 gi|221160476|gb|ACM01456.1| Phytoene synthase CrtB [Rhodobacter sphaeroides KD131]
          Length = 355

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 95/290 (32%), Gaps = 12/290 (4%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-------R 68
           I S D       +R   Y  + A  L P   R     LY F        D A        
Sbjct: 2   IASADLDACREMIRTGSYSFHAASRLLPERVRAPSLALYAFCRVADDAVDEAVNDGQREE 61

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +   +   +   +D  +    G      +P      ++V ++++P      ++E   +D+
Sbjct: 62  DAEVKRRAVLSLRDRLDLVYAGRP--RNAPADRAFAAVVEEFEMPRALPEALLEGLAWDA 119

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
              S         Y+ R+++ +  +  +++         R     G+A  +  +   +  
Sbjct: 120 VGRSYDSFSGVLDYSARVAAAVGAMMCVLMRVRDPDVLARACD-LGLAMQLTNIARDVGT 178

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQ-NSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               G++Y P D +   GL  E FL+     DRI    +       +   ++   +  + 
Sbjct: 179 DARSGRIYLPRDWMEEAGLPVEEFLARPVVDDRIRAVTRRLLRAADRLYLRSEAGVCGLP 238

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               P       I   +      +G+  V+      +  +  ++  S+ +
Sbjct: 239 LACRPGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQKLVWLGLSATR 288


>gi|325001329|ref|ZP_08122441.1| phytoene synthase [Pseudonocardia sp. P1]
          Length = 299

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 86/284 (30%), Gaps = 8/284 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +               +     +LA  L PP  RI +  LY F      + D       
Sbjct: 16  TDPALRAAYAACRDLHAEHGRTYFLATRLLPPGRRIDIHALYGFARYADEIVDDPDGAGG 75

Query: 73  RD--MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
            +  +RL       E++  G       P  V +    R++ L  Q F D + +   D   
Sbjct: 76  GEPHIRLDALDAELEAALGGAPLPGSRPEVVAVAETARRHALDPQLFRDFMVSMRMDLTV 135

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-AGIAQFIGQLICQLPIH 189
                      Y    ++ +      +L +    A         G+A  +   +  +   
Sbjct: 136 SGYPTDDDLAVYVHGSAAVIGLQTLPVLGTVAPRAEAEPHAALLGVAFQMTNFLRDVGED 195

Query: 190 YHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             RG++Y P D L A G+DRE       +G+   R+  AI            +A   +  
Sbjct: 196 LDRGRVYLPADELAAFGVDRELLAWSRRTGRADPRVRRAIAHLVARTRATYRRADPGIPM 255

Query: 246 ILPDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPW 288
           + P           +   +L    + G+ ++          R  
Sbjct: 256 LEPVSRACVGAARTLYSEILDGIADAGYDVLRRRVAVPNRRRAA 299


>gi|282866075|ref|ZP_06275123.1| squalene synthase HpnD [Streptomyces sp. ACTE]
 gi|282559114|gb|EFB64668.1| squalene synthase HpnD [Streptomyces sp. ACTE]
          Length = 313

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 84/283 (29%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +          +      L P   R ++S LY F   +  + D A  P T+  R
Sbjct: 12  VQAAYSYCEAVTGQQARNFAYGIRLLPYAKRQAMSALYAFSRRVDDIGDGALEPETKRTR 71

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+  +++ +   +G + E    P +V L    R++ LP     ++I+    D   +    
Sbjct: 72  LEGTRELLDRIREGAVDEDDTDPVAVALADAARRFPLPLGGLDELIDGVLMDVRGEHYET 131

Query: 136 CKQFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                 Y   ++  +  L+  +  +E        +       G+A  +  ++  +     
Sbjct: 132 WDDLRTYCRCVAGAIGRLSLGVFGTEPGVPGADRAAEYADTLGLALQLTNILRDVREDAG 191

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P D L   G        +       +  +            +    +  +    
Sbjct: 192 NGRTYLPADDLAKFGCSEGFHRATPPAGSDFAGLVHYEVRRARALFAEGYRLLPMLDRRS 251

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 252 GACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGHEKAYVAVR 294


>gi|126462675|ref|YP_001043789.1| squalene/phytoene synthase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104339|gb|ABN77017.1| phytoene synthase [Rhodobacter sphaeroides ATCC 17029]
          Length = 355

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 95/290 (32%), Gaps = 12/290 (4%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-------R 68
           I S D       +R   Y  + A  L P   R     LY F        D A        
Sbjct: 2   IASADLDACREMIRTGSYSFHAASRLLPERVRAPSLALYAFCRVADDAVDEAVNDGQREE 61

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +   +   +   +D  +    G      +P      ++V ++++P      ++E   +D+
Sbjct: 62  DAEVKRRAVLSLRDRLDLVYGGRP--RNAPADRAFAAVVEEFEMPRALPEALLEGLAWDA 119

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
              S         Y+ R+++ +  +  +++         R     G+A  +  +   +  
Sbjct: 120 VGRSYDSFSGVLDYSARVAAAVGAMMCVLMRVRDPDVLARACD-LGLAMQLTNIARDVGT 178

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQ-NSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               G++Y P D +   GL  E FL+     DRI    +       +   ++   +  + 
Sbjct: 179 DARSGRIYLPRDWMEEEGLPVEEFLARPVVDDRIRAVTRRLLRAADRLYLRSEAGVCGLP 238

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               P       I   +      +G+  V+      +  +  ++  S+ +
Sbjct: 239 LACRPGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQKLVWLGLSATR 288


>gi|319899184|ref|YP_004159277.1| hypothetical protein BARCL_1025 [Bartonella clarridgeiae 73]
 gi|319403148|emb|CBI76706.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 286

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 3/278 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR+ D DRY++ L +P   R +L+ LY F+ E+ R+R++ R+P+  ++RL+WW+D
Sbjct: 7   YCLDILRNTDRDRYISVLFAPKQKRRALAALYAFNAEVARIRESVRDPLIGEIRLRWWRD 66

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
              +          +P   +LL  +  + LP   FL   +A  FD Y++ I      E Y
Sbjct: 67  SIANDEIQNS--ENNPVLSDLLKTITLFKLPKTAFLHYCDARIFDLYHNPIITIHDLETY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             + +S ++ L+  ILD +         KY GIAQ +  ++    +   R Q YFP D+L
Sbjct: 125 CSKTASTILKLSCQILDFDVAPNFTDACKYGGIAQALSGILRLFSLMQSRYQCYFPADML 184

Query: 203 GAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
            A+G++R    S   N ++    I+    L   Y  K  E    +   + PAF+P+++T 
Sbjct: 185 EALGMNRGELDSNCINDEQKQQIIEAMVALSRDYYLKFYEHSVVLPKTLKPAFLPLAVTP 244

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + L+     G K+   + T   L R W +  ++I   F
Sbjct: 245 ASLQKTIQLGAKVFHGNTTSLLLHRYWLITKAAISGNF 282


>gi|309812768|ref|ZP_07706507.1| phytoene/squalene synthetase [Dermacoccus sp. Ellin185]
 gi|308433285|gb|EFP57178.1| phytoene/squalene synthetase [Dermacoccus sp. Ellin185]
          Length = 319

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 85/296 (28%), Gaps = 15/296 (5%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-- 70
            E + +          R      Y   L  PP  R  +  LY        + D       
Sbjct: 4   PEALLTHGYRQARDITRMHGTTYYWGTLFLPPQQRRDVYGLYALCRLADDIVDEPEEATG 63

Query: 71  ------ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
                 +    RL  ++  F++        S  P    ++   R+ DL +  +     A 
Sbjct: 64  HGLDASLPPGERLAQFEQRFQADLA--AGRSDDPLFAAIVDTARRLDLDSGCYDRFFGAM 121

Query: 125 FFDSYNDSIFDCKQFEH-YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
             D    S     Q    Y    ++ +  +   +L      A+    +  G+A  +   +
Sbjct: 122 QLDLVRTSWASWPQLRDEYMEGSAAVIGEMMLPVLRPRSREAAFAPARALGLAFQLTNFL 181

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P D L A G         + + +    +             A   +
Sbjct: 182 RDVGEDLERGRVYLPADELAAHG---ADPWLRRVTPQWRAFMAEQIARNRALFHDAEAGL 238

Query: 244 RYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++           +++   +L   +   + + S  H  +   +     +  +  R
Sbjct: 239 PHLPASSRRCVGAALAMYSRILCLIEAADYDVFSTRHRVSAARKSAIAGAVVVTGR 294


>gi|291003523|ref|ZP_06561496.1| probable phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
          Length = 290

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 88/281 (31%), Gaps = 8/281 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    R   +   +      L P   R +LS +Y F   +  + D       +  R
Sbjct: 8   IREAYAECERITGEQARNFSYGIRLLPGPKRRALSAVYAFARRVDDIGDGDLPCEEKLRR 67

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+  +    S+      +S  P  V L +  ++  +P   F ++I+    D    +    
Sbjct: 68  LKQARVAVHSA----TVDSSDPVVVALAATAQRMPIPLSAFDELIDGCESDVRGATYDTF 123

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +  HY   ++  +  L+  +  +   + +       G+A  +  ++  +   +  G++Y
Sbjct: 124 AELVHYCRCVAGSVGRLSLGVFGAADSAEARPRADALGVALQLTNILRDVREDFGNGRVY 183

Query: 197 FPLDILGAVGLDRESFLSGQ---NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP- 252
            P   L   G+  E+   G    +    +  I+  A+    +       +  +       
Sbjct: 184 LPAADLERFGVGMEADRRGDLRIDEPGWNALIEYQAQRAELWYAVGLGLLPLLDRRSRAC 243

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                 I   +L        + +S   +     +      S
Sbjct: 244 CAAMAGIYHELLHRIAAEPHQALSGRMSLPAWKKAGVAARS 284


>gi|116620388|ref|YP_822544.1| squalene/phytoene synthase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223550|gb|ABJ82259.1| Squalene/phytoene synthase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 312

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 88/286 (30%), Gaps = 9/286 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                +      +   + ++   L P         +Y +      + D   +P      L
Sbjct: 29  EEGRAYTRWLATNHYENFHVVSFLLPKRLHQDFYNVYAYCRWADDLADEIGDPAESLRLL 88

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
            WW+   ++  +     +  P    L   V++Y +P   F D+I+A   D       D +
Sbjct: 89  TWWRGELDAMYE---GRATHPVLAALAPTVQRYGIPRTPFSDLIDAFVQDQTVTRYRDWE 145

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +   Y    ++ +  L   +          ++      A  +      + +   + ++Y 
Sbjct: 146 ELFGYCRNSANPVGRLVLYLCGYSDAE-RQQLSDATCTALQLANFWQDVTVDLLKDRVYL 204

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIP 256
           PL +L   G   E   + Q +   + A++   E             R +         + 
Sbjct: 205 PLALLEKHGCTVEQVFNRQFTPGFAAAMREAVEKARGLFHAGLPLTRMVDRRLAIDLDLF 264

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM----LSSSIKKR 298
                 VL+  +  G+ ++      +++ R   +       +   R
Sbjct: 265 SRGGMRVLEKIEQQGYDVLRARPAVSKVERVALLVASVARVAFSGR 310


>gi|260574935|ref|ZP_05842937.1| Squalene/phytoene synthase [Rhodobacter sp. SW2]
 gi|259022940|gb|EEW26234.1| Squalene/phytoene synthase [Rhodobacter sp. SW2]
          Length = 358

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 96/280 (34%), Gaps = 8/280 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D  +    +R      ++A  L P   R     LY F        D   +     + L
Sbjct: 16  AADMDYCREAIRTGSRSFHMASKLLPAKVRDPALALYAFCRIADDAVDEGDDKAHAVLSL 75

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              +D  +   +G    + +        I+ ++D+P      ++E   +D+         
Sbjct: 76  ---RDRLDMVYQGSPRNACA--DRAFARIIEEFDMPRALPEALLEGLAWDAVGRRYDTFS 130

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y+ R+++ +  +  +++      A  R     G+A  +  +   +      G++Y 
Sbjct: 131 GIMDYSARVAAAVGAMMCVLMRVRDADALARACD-LGLAMQLSNIARDVGEDARAGRIYL 189

Query: 198 PLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           PLD L   G+D E+FL+  + +  +   +K   +   +   ++   +  +     P    
Sbjct: 190 PLDWLRDEGIDLEAFLADPKPTPEVCGLVKRLLDEATRLYGRSAAGVSLLPLACRPGIHA 249

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             +    +      +G   VS         +  ++  + +
Sbjct: 250 ARLIYCGIGGAVARNGHDSVSVRAHTGAGQKIGWLGRALL 289


>gi|91978228|ref|YP_570887.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisB5]
 gi|91684684|gb|ABE40986.1| phytoene synthase [Rhodopseudomonas palustris BisB5]
          Length = 349

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 85/279 (30%), Gaps = 8/279 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
               D L     +++     + A  + P         LY F        D   +      
Sbjct: 2   TVHSDMLACRVMIKEGSRTFHAASKVLPRRISDPAIALYAFCRVADDAVDLGLDRSNAVE 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L+   D               P       ++ ++ +P      +IE   +DS       
Sbjct: 62  VLKDRLDR-----ACRGLPRPYPSDRAFADVIARFSIPPAIPEALIEGLEWDSQGRRFET 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 YA R++  +  + T+++   R     R     G A  +  +   +      G++
Sbjct: 117 LSDLYGYAARVAGTVGVMMTLVMGQRRPDIVARACD-LGCAMQLTNIARDIGEDARNGRI 175

Query: 196 YFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-A 253
           Y PL  +   GLD E +L+  + +  I+  +K   +       +A   +  +     P  
Sbjct: 176 YMPLSWMREAGLDPEKWLADPKFTPEIAGIVKRLIDTADALYDRATLGIANLPRSCRPGI 235

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           F   ++   + +  +      VS     +   +   +  
Sbjct: 236 FAARALYAEIGREVERSALDSVSARAVVSTGRKLAVLSR 274


>gi|170749249|ref|YP_001755509.1| squalene/phytoene synthase [Methylobacterium radiotolerans JCM
           2831]
 gi|170655771|gb|ACB24826.1| Squalene/phytoene synthase [Methylobacterium radiotolerans JCM
           2831]
          Length = 338

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 5/271 (1%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           +R      + A  L P   R +   LY F      + D A +P  R   +   +     +
Sbjct: 3   IRAGSKSFFAAGRLLPADMREAAYGLYAFCRLSDDLVDDAASPAERRSAVARLESRIGQA 62

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
             G  A++  P       IV  + +P      +IE   +D+      D      YA R++
Sbjct: 63  YAGRPADA--PADRAFAEIVTAHAIPEALPRALIEGFAWDAEGRRYADLGALNAYAARVA 120

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
             +  +  +I+ +    A  R     G A  +  +   +      G+LY PLD +   GL
Sbjct: 121 GSVGAMMALIMGTRDPDALARACD-LGAAMQLTNIARDVGEDARMGRLYLPLDWMREAGL 179

Query: 208 DRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLK 265
           D ++FL+  + S  ++  +            +A   +  +     P+     +    + K
Sbjct: 180 DPDAFLADPRPSPALAGTVARLLAEADNLYARAEAGIAVLPSGCRPSIRAAGLIYAEIGK 239

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                G+  V H        +   +  +   
Sbjct: 240 VVAAQGYDSVRHRARVTTGRKLALIARALRT 270


>gi|319408340|emb|CBI81993.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 286

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 83/278 (29%), Positives = 141/278 (50%), Gaps = 3/278 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR  D DRY++ L +P   R +L+ LY F+ E+ R+R++  +P+  ++RL+WW D
Sbjct: 7   YCLDILRATDRDRYISVLFAPKKKRWALAALYAFNAEIARIRESVHDPLIGEIRLRWWYD 66

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
              +          +P   +LL+ +  ++LP   FL   +A  FD YND +      E Y
Sbjct: 67  SIANGEIKNNKH--NPILDDLLTTIALFNLPKTAFLHYCDARVFDLYNDPMITIHDLEAY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             + +S ++ LA  ILD +      +  ++ GIAQ +  ++  L +   R Q YFP D+L
Sbjct: 125 CSKTASTILQLACQILDFDAAQNFTKAYEHGGIAQALSGILRLLSLMQSRYQRYFPSDML 184

Query: 203 GAVGLDRESF-LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
            A+G++RE    +  N+++    IK    L   +  K  E    +   + PAF+P+SIT 
Sbjct: 185 KAMGMEREELEFNHINNEQKHKIIKAMVALSKDHYLKFYEHSITLPKTLKPAFLPLSITP 244

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + L+     G K+     T +QL R W +  +++  RF
Sbjct: 245 ASLQRTMQLGEKVFQEDATLSQLHRYWLITKAAMNGRF 282


>gi|302537964|ref|ZP_07290306.1| squalene synthase HpnD [Streptomyces sp. C]
 gi|302446859|gb|EFL18675.1| squalene synthase HpnD [Streptomyces sp. C]
          Length = 316

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 81/290 (27%), Gaps = 4/290 (1%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           T +             +          +      L P   R ++S LY F   +  + D 
Sbjct: 8   TAHASAPSAQVLAAYSYCEAVTGTQARNFAYGIRLLPTDKRQAMSALYAFSRRVDDIGDG 67

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
           A  P  +  RL+  + +      G + E    P +V L    R++ +P     ++I+   
Sbjct: 68  ALAPDAKLARLEDTRALLGRIRAGEVDEDDTDPVAVALAHAARRFPIPLGGLDELIDGVL 127

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR-VIKYAGIAQFIGQLIC 184
            D   +        + Y   ++  +  L+  +  +   +          G+A  +  ++ 
Sbjct: 128 MDVRGEEYETWDDLKAYCRCVAGAIGRLSLGVFGTVGPADRADEYADTLGLALQLTNILR 187

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
            +      G+ Y P + L   G                +  +            +    +
Sbjct: 188 DVREDAGNGRTYLPAEDLAKFGCGEGFQGGRAPAGSDFAGLVHHEVRRARALFTEGYRLL 247

Query: 244 RYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             +             I   +L   +     ++    +     + +  + 
Sbjct: 248 PMLDRRSGACVAAMAGIYRRLLDRIEREPEAVLRGRVSLPTHEKAYVAVR 297


>gi|320007259|gb|ADW02109.1| squalene synthase HpnD [Streptomyces flavogriseus ATCC 33331]
          Length = 314

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 83/283 (29%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +          +      L P   R ++S LY F   +  + D   +P T+ +R
Sbjct: 12  VQAAYSYCEAVTGQQARNFAYGIRLLPYEKRQAMSALYAFSRRVDDIGDGELDPETKHVR 71

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+  + +      G + E    P +V L    R++ LP     ++I+    D    +   
Sbjct: 72  LEETRGLLGRIRDGAVDEDDTDPVAVALADATRRFPLPLGGLDELIDGVLMDVRGATYET 131

Query: 136 CKQFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               + Y   ++  +  L+  +  ++        +       G+A  +  ++  +     
Sbjct: 132 WDDLKTYCRCVAGAIGRLSLGVFGTQPGAPGAERAAEYADTLGLALQLTNILRDVREDAG 191

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P D L   G        +       +  +            +    +  +    
Sbjct: 192 NGRTYLPADDLAKFGCSAGFHRATPPPGSDFAGLVHFEVRRARALFAEGYRLLPMLDRRS 251

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 252 GACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGHEKAYVAVR 294


>gi|55978284|ref|YP_145340.1| phytoene synthase [Thermus thermophilus HB8]
 gi|55773457|dbj|BAD71897.1| phytoene synthase [Thermus thermophilus HB8]
          Length = 289

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 90/283 (31%), Gaps = 8/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
              D   +LR LR      YL  LL P   R     +Y          D           
Sbjct: 7   MEPDWKALLRVLRAHSATFYLGSLLFPKEARKGAWAVYAACRLGDEAVDGEGG---GPEA 63

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+ W    E + +      ++ +   L   + ++D+P + FL M E    D     +   
Sbjct: 64  LEAWWAGVERAYR---GRPLAEWEKGLAWALERWDIPFEAFLHMREGFQTDLGPVRLGTE 120

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y ++++  +  +   I    + + +  V    G A  +  ++  +     R ++Y
Sbjct: 121 AELLRYCYQVAGTVGRMMAPIAGGGKEAEARAVK--LGQAMQLTNILRDVGEDLGRDRVY 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P ++L A G+      +G+ +      +            +    + ++        + 
Sbjct: 179 LPSELLKAYGVRLSDLEAGRITPEYRALMAHLEGKARALYREGLAGLGHLKVGRAAIALA 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                 +L   +  G+  +          R   +  + +  RF
Sbjct: 239 ALQYRGILDKLRLSGYDNLGRRAHLKAWERALLLPKAFLAARF 281


>gi|290955845|ref|YP_003487027.1| squalene/phytoene synthase [Streptomyces scabiei 87.22]
 gi|260645371|emb|CBG68457.1| putative squalene/phytoene synthase [Streptomyces scabiei 87.22]
          Length = 316

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 32/295 (10%), Positives = 78/295 (26%), Gaps = 7/295 (2%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
              +              +          +      L P   R ++S LY F   +  + 
Sbjct: 3   RTVETEPHTSAPVLAAYSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDIG 62

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEA 123
           D A     +  RL+  + +      G + E    P +V L      + +P     ++I+ 
Sbjct: 63  DGALAVEVKTARLEESRTLLTRVRGGSVDEDDTDPVAVALTHAQSAFPIPLDALDELIDG 122

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFI 179
              D   +        + Y   ++  +  L+  +  +E        +       G+A  +
Sbjct: 123 VLKDVRGEYYETWDDLKVYCRCVAGSIGRLSLGVFGTEPGARGSERAPEYADTLGLALQL 182

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFK 238
             ++  +      G+ Y P D L   G                +  +            +
Sbjct: 183 TNILRDVREDAEGGRTYLPTDDLAKFGCSAGFAGPLPPADSDFAGLVHFEVRRARALFAE 242

Query: 239 AREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
               +  +             I   +L   +     ++    +     + +  + 
Sbjct: 243 GYRLLPMLDRRSGACVAAMAGIYRRLLDRIEREPEAVLRGRVSLPGREKAYVAVR 297


>gi|289718945|gb|ADD17067.1| dehydrosqualene synthase [Lactobacillus plantarum]
          Length = 293

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 8/273 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D  +     +      Y A    P     S+  +Y F      + D   +       L 
Sbjct: 13  TDFAYCQAITKRSSSAFYTAFSQLPLERAWSIYAVYAFCRTADDLVDVDHDIDG----LM 68

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
             +    +   G +     P    L  +   YD+    F DM+     D+        + 
Sbjct: 69  ALRQSLTAFANGHV--PDHPMWRALAVVFETYDMNLDVFFDMLTGQEQDATFKQPQTQQA 126

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            E Y + ++  +  +   +L +   S     ++  GIA  +  ++  +   Y RG++Y P
Sbjct: 127 LEDYCYYVAGSVGLMILPMLATNPQSLVKPAVE-LGIAMQLTNILRDVGEDYQRGRIYLP 185

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV- 257
             +L    L+         S       +  A++ +     A   M  I P   P+ +   
Sbjct: 186 SKLLAHYQLNPTDLHGPIPSANFIRLWEHEAQIAMNKYEAALTMMPQIDPVARPSLLAAT 245

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
            +   +L  A+   + I+S         +   +
Sbjct: 246 LLYRELLLIAREQHYPILSQRVFLTDERKTQVL 278


>gi|209549099|ref|YP_002281016.1| phytoene synthase protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534855|gb|ACI54790.1| phytoene synthase protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 285

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 111/281 (39%), Positives = 165/281 (58%), Gaps = 3/281 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + +    L  LRD D DRYLACLLSP   R +L+ LY F+ EL R+RD    P+  ++RL
Sbjct: 7   ATNQETCLAMLRDSDRDRYLACLLSPEDKRGALAALYAFNAELARIRDLVHEPLPGEVRL 66

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           Q+W+D+ E S     + + +P +  LL+ +  + LP +  +DMIEA  FD Y+D +    
Sbjct: 67  QYWRDLLEGSAH--GSTAANPVASALLTAIETHRLPRKTLIDMIEARTFDLYDDPMETRL 124

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             E YA   +S LI LA+++L  E  + S     +AG+AQ +  L+  +P++  RGQ+Y 
Sbjct: 125 SLEGYAGETASALIQLASLVLSPEEAARSADAAGHAGVAQAVAGLLLLMPLYRRRGQVYI 184

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           PL IL A GL+R++FL+G++  RIS AI+ FA LG ++L KAR     I P VFPAF+P 
Sbjct: 185 PLQILSATGLNRDTFLAGEDRQRISAAIEAFAGLGREHLAKARAA-GPIAPAVFPAFLPA 243

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           ++ E VL  AQ  G  +      P Q  R   M  S+++++
Sbjct: 244 TLAEPVLFRAQKLGAVLFDRPLQPPQWRRQLSMALSAVRRK 284


>gi|28379633|ref|NP_786525.1| phytoene synthase [Lactobacillus plantarum WCFS1]
 gi|300769577|ref|ZP_07079463.1| phytoene synthase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308181864|ref|YP_003925992.1| phytoene synthase [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28272473|emb|CAD65397.1| phytoene synthase [Lactobacillus plantarum WCFS1]
 gi|300492992|gb|EFK28174.1| phytoene synthase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308047355|gb|ADN99898.1| phytoene synthase [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 293

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 86/273 (31%), Gaps = 8/273 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D  +     +      Y A    P     S+  +Y F      + D   +       L 
Sbjct: 13  TDFAYCQTITKRSSSAFYTAFSQLPLERAWSIYAVYAFCRTADDLVDVDHDIDG----LM 68

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
             +    +   G +     P    L  +   YD+    F DM+     D+        + 
Sbjct: 69  ALRQSLTTFANGHV--PDHPMWRALAVVFETYDMNLDVFFDMLTGQEQDATFKQPQTQQA 126

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            E Y + ++  +  +   +L +   S     ++  G A  +  ++  +   Y RG++Y P
Sbjct: 127 LEDYCYYVAGSVGLMILPMLATNPQSLVKPAVE-LGSAMQLTNILRDVGEDYQRGRIYLP 185

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV- 257
             +L    L+         S       +  A++ +     A   M  I P   P+ +   
Sbjct: 186 SKLLAHYQLNPTDLHGPIPSANFIRLWEHEAQIAMNKYEAALTMMPQIDPVARPSLLAAT 245

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
            +   +L  A+   + I+S         +   +
Sbjct: 246 LLYRELLLIAREQHYPILSQRVFLTDERKTQVL 278


>gi|329937104|ref|ZP_08286733.1| squalene/phytoene synthase [Streptomyces griseoaurantiacus M045]
 gi|329303711|gb|EGG47596.1| squalene/phytoene synthase [Streptomyces griseoaurantiacus M045]
          Length = 316

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 33/296 (11%), Positives = 85/296 (28%), Gaps = 9/296 (3%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
              ++ +           +          +      L P   R ++S LY F   +  + 
Sbjct: 3   RTVESEQHVSPPVLAAYRYCETVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDIG 62

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEA 123
           D       +  RL+  + +      G + E    P +V L     ++ +P     ++++ 
Sbjct: 63  DGDLADDVKKARLEETRALLTRVRAGEVGEDDTDPVAVALAHAADRFPIPLGGLDELLDG 122

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR----VIKYAGIAQFI 179
              D   ++       + Y   ++  +  L+  +  +E  +             G+A  +
Sbjct: 123 VLMDVAGETYETWDDLKAYCRCVAGAIGRLSLGVFGTEPEAPGADRASEYADTLGLALQL 182

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLD--RESFLSGQNSDRISLAIKIFAELGLKYLF 237
             ++  +      G+ Y P D L   G        L  + SD  +  +            
Sbjct: 183 TNILRDVREDAETGRTYLPADDLAKFGCSGGFTGPLPPEGSD-FAGLVHFEVRRARALFA 241

Query: 238 KAREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           +    +  +             I   +L   +     ++    +     + +  + 
Sbjct: 242 EGYRLLPLLDRRSGACVAAMAGIYRRLLDRIEREPEAVLRGRVSLPGHEKAYVAVR 297


>gi|319407530|emb|CBI81178.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 286

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 3/278 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR+ D DRY++ L +P   R +L+ LY F+ E+ R+R++ R+P+  ++RL+WW+D
Sbjct: 7   YCLDILRNTDRDRYISVLFAPKQKRRALTALYAFNAEIARIRESVRDPLMGEIRLRWWRD 66

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
              +  +       +P   +LL  +  + L    FL   +A  FD YN+ I      E Y
Sbjct: 67  SIANDEQQNS--ESNPILNDLLKTITLFKLSKITFLHYCDARIFDLYNNPIATIHDLEAY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             + +S ++ L+  ILD +       V KY GIAQ +  ++  LP+   R Q YFP D+L
Sbjct: 125 CSKTASTILQLSCQILDFDVAPNFTDVCKYGGIAQALSGILRLLPLTQSRYQCYFPTDML 184

Query: 203 GAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
            A+G+ RE   S   N  +    I+    L   Y  K  +    +   + PAF+P+++T 
Sbjct: 185 EALGISREELNSNCINDKQKQQIIEAMVALSRDYYLKFYDYSVTLPKTLKPAFLPLAVTP 244

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + L+     G K+   + T   L R W +  ++I   F
Sbjct: 245 ASLQKTVQLGAKVFQENTTSLLLYRYWLITKAAISGHF 282


>gi|50313418|gb|AAT74581.1| PSY [Citrus sinensis]
          Length = 299

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 73/234 (31%), Gaps = 8/234 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + S           +     YL  LL     R ++  +Y +      + D         
Sbjct: 69  SLLSEAYDRCGEVCAEYAKTFYLGTLLMTSERRRAIWAIYVWCRRTDELVDGPNASHITP 128

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 129 TALDRWESRLEDLFR---GRPFDMLDAALSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYK 185

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 186 NFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGED 245

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             RG++Y P D L   GL  +   +G+ + +    +K   +    +   A   +
Sbjct: 246 ARRGRVYLPQDELAQAGLSDDDIFAGEVTIKWRNFMKNQIKRARMFFDMAENGV 299


>gi|300114571|ref|YP_003761146.1| squalene synthase HpnD [Nitrosococcus watsonii C-113]
 gi|299540508|gb|ADJ28825.1| squalene synthase HpnD [Nitrosococcus watsonii C-113]
          Length = 286

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 101/280 (36%), Gaps = 6/280 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +            Y + L      R +++ LY +  E++ +     +      +LQ
Sbjct: 2   DSREYCHNKATPPGTSLYYSLLFVTEAQRHAVTALYAYQKEIVGIVAECSDVSVAQTKLQ 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW++       G       P +  L + V+ YDLP + FL +I     D    +    + 
Sbjct: 62  WWQEEITRLFAGC---PRHPVTQTLATPVKTYDLPQRSFLQVIGGAASDLGQSTYPSFQA 118

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y ++I+  +  +A  I   +         +  GIA  +  ++  +     RG++Y P
Sbjct: 119 LTTYCYQIAGVISLMAAKIYGYQDSET-RTYAEKLGIALQLTHILRNVRQDADRGRIYLP 177

Query: 199 LDILGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIP 256
            + L    +  E+  +   NS  ++  +   A     Y   A   +         A  I 
Sbjct: 178 QEELARFQVSTETIFTSYANSQGMTALLAHQAGQARHYFHSALANLGKHDRQTQCAGLIQ 237

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +++  ++L   +  G+ ++    +   L + W    +S +
Sbjct: 238 MALGLNILDAMEEDGYPVLQRRVSLTPLRKLWIAWRTSRR 277


>gi|134099808|ref|YP_001105469.1| putative phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005600|ref|ZP_06563573.1| putative phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912431|emb|CAM02544.1| putative phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
          Length = 323

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 89/292 (30%), Gaps = 11/292 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA---RNPITR 73
                              +LA  L  P  R ++  LY F      V DT     + + R
Sbjct: 16  LRAAYRRCRDLNACHGRTYFLATRLLTPAQRPAVHALYGFARWADDVVDTPRPGEDDLAR 75

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           + RL        +        S  P    ++    ++ +  + F D + +   D      
Sbjct: 76  ERRLDALARELFAGLDR--GGSDDPVLAAVVDTAVRHGIDRRLFEDFLHSMRMDLTVTDY 133

Query: 134 FDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
            D    + Y    +  +   L  ++  +     +       G A  +   +  +     R
Sbjct: 134 PDRAALDTYVRGSAEAIGLQLLPVLGTASPPGVAAPHAAALGKAFQLTNFLRDVAEDLDR 193

Query: 193 GQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           G++Y P D L A G+DR       L  +   R+  A+        +    A   +  + P
Sbjct: 194 GRVYLPADELAAFGVDRSLLRWCRLRERTDPRVRAALAAQHATTREIYRFAARGIAMLHP 253

Query: 249 DVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              P     + +   +L   ++  F + +       L R      + ++  +
Sbjct: 254 VSRPCVRTALVLYSEILDRIEDADFAVFARRARVGNLRRLQVAGMAVLRVAW 305


>gi|307946888|ref|ZP_07662223.1| squalene/phytoene synthase [Roseibium sp. TrichSKD4]
 gi|307770552|gb|EFO29778.1| squalene/phytoene synthase [Roseibium sp. TrichSKD4]
          Length = 283

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 75/281 (26%), Positives = 138/281 (49%), Gaps = 2/281 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            + +  +   +LR +D++RY   L +   +R  L  LY F+ E+ R+R    +P+  ++R
Sbjct: 1   MNTNFDYAAESLRTLDWNRYFTVLFADKAHRPGLFALYTFNAEIARIRQLVSDPMPGEIR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+      G +  S +P +  L + V  Y LP      MI+A  FD Y+D +   
Sbjct: 61  LQWWRDLLSGEGHGDV--SANPNAAALKATVETYKLPVPALEAMIDARVFDLYDDPMPSL 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E YA   +S +  LA++IL++   + +  V  +AGIA  +  L+  LP H  R Q++
Sbjct: 119 NDLEGYAGETTSAVFQLASLILNNGEDAGTATVAGHAGIAYALTGLMRALPYHASRRQVF 178

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L    +D E+   GQ++  +S A+    E    ++ + RE +  +  +V  A++P
Sbjct: 179 LPSDLLNRHNVDMETVFQGQSTLELSSALSELREHARHHMKRVRENLHDVPENVAAAYLP 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +++ +  L   +    + +      ++L R W     + K 
Sbjct: 239 LALVDPYLVELEKSSDQALQSLSELSKLRRQWIYWRKARKG 279


>gi|254469503|ref|ZP_05082908.1| phytoene synthase protein [Pseudovibrio sp. JE062]
 gi|211961338|gb|EEA96533.1| phytoene synthase protein [Pseudovibrio sp. JE062]
          Length = 286

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 3/281 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S+   +    ++   Y+RYL+ L +P   R SL  LY F  E+ R+R+    P+  ++R
Sbjct: 1   MSQAYNYCNDFVKRFSYERYLSTLYAPITARPSLIALYAFACEIARIRELVNEPMPGEIR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW D    +  G +    +P +  ++  +  + LP + FL++I A  FD Y+D +   
Sbjct: 61  LQWWHDALSGTDHGDVMH--NPVAQAIIETIEHHKLPREPFLNLISARRFDLYSDPMPTV 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSAS-LRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
              E Y    SS L+ LA+MIL  +           + G+A  +  L+  L     R Q 
Sbjct: 119 NDLEGYCGETSSALVLLASMILSGKPADRQVSDACGHGGVAYAMSGLMQTLAWQASRHQQ 178

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           + P ++L    +D  +    ++ D +    +   EL  K+L    E +  I   V PAF+
Sbjct: 179 FVPKEVLDRHDVDPNALKGNRSDDGVWAVFEEMVELSRKHLDDCEEALEGIDKSVLPAFL 238

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           PV   E     A    F+ +        + R W+M  +S +
Sbjct: 239 PVFQVELFFNEADKDSFEPLQVCGGAPHIRRMWHMWRTSRR 279


>gi|254557783|ref|YP_003064200.1| phytoene synthase [Lactobacillus plantarum JDM1]
 gi|254046710|gb|ACT63503.1| phytoene synthase [Lactobacillus plantarum JDM1]
          Length = 293

 Score =  171 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 8/273 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D  +     +      Y A    P     S+  +Y F      + D   +       L 
Sbjct: 13  TDFAYCQTITKRSSSAFYTAFSQLPLERAWSIYAVYAFCRTADDLVDVDHDIDG----LM 68

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
             +    +   G +     P    L  +   YD+    F DM+     D+        + 
Sbjct: 69  ALRQSLTTFANGHV--PDHPMWRALAVVFETYDMNLDVFFDMLTGQEQDATFKQPQTQQA 126

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            E Y + ++  +  +   +L +   S     ++  GIA  +  ++  +   Y RG++Y P
Sbjct: 127 LEDYCYYVAGSVGLMILPMLATNPQSLVKPAVE-LGIAMQLTNILRDVGEDYQRGRIYLP 185

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV- 257
             +L    L+         S       +  A++ +     A   M  I P   P+ +   
Sbjct: 186 SKLLAHYQLNPTDLHGPIPSANFIRLWEHEAQIAMNKYEAALTMMPQIDPVARPSLLAAT 245

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
            +   +L  A+   + I+S         +   +
Sbjct: 246 LLYRELLLIAREQHYPILSQRIFLTDERKTQVL 278


>gi|159046049|ref|YP_001534843.1| phytoene synthase [Dinoroseobacter shibae DFL 12]
 gi|157913809|gb|ABV95242.1| phytoene synthase [Dinoroseobacter shibae DFL 12]
          Length = 361

 Score =  171 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 95/281 (33%), Gaps = 8/281 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D       +R      + A  L P   R     LY F        D         + L
Sbjct: 17  QADLDHCKEAIRHGSLSFHAASRLLPNRVRDPALALYAFCRLADDAVDLHHEKPAAVLDL 76

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              +D  + + +G      +P      +++  +D+P      +IE   +D+         
Sbjct: 77  ---RDRLDLAYRGQP--RNAPADRAFTAMIEAHDMPRALPEALIEGFAWDAIERQYDTLS 131

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y+ R+++ +  + T+++      A  R     G+A  +  +   +      G+LY 
Sbjct: 132 DVRAYSARVAAAVGAMMTVLMGVRDADALARACD-LGVAMQLTNICRDVGEDAAEGRLYL 190

Query: 198 PLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P  ++   GLD E+FL+  + S+ ++   +       +  +++   +  +     P    
Sbjct: 191 PRAMMAEEGLDPEAFLADPRPSEALTTVTRRLLAEATRLYYRSEAGIAALPRAARPGIFA 250

Query: 257 VS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              I   +        F  ++     +   +  ++  S ++
Sbjct: 251 ARHIYAGIGNEVTRAAFDNITRRAHTSAGQKLGWIGLSVLR 291


>gi|209965374|ref|YP_002298289.1| phytoene synthase [Rhodospirillum centenum SW]
 gi|209958840|gb|ACI99476.1| phytoene synthase [Rhodospirillum centenum SW]
          Length = 368

 Score =  171 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 8/265 (3%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D +     LR        A LL P   R + + LY F        D           L  
Sbjct: 19  DLVVCREMLRTGSRSFQAASLLLPTQVREAATGLYAFCRMADDAVDLGDG---GQDVLDR 75

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
             +  + +  G   +   P       +V +Y +P      +IE   +D+      D    
Sbjct: 76  LNERLDRAYAGTPID--DPVDRAFARVVARYGIPKALPAALIEGFAWDAAGRRYEDLSGL 133

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y+ R++  +  + T+++      A  R     G+A  +  +   +      G++Y PL
Sbjct: 134 FDYSARVAGTVGAMMTLLMGVRDPGALARAAD-LGVAMQLSNIARDVGEDARNGRIYLPL 192

Query: 200 DILGAVGLDRESFLSGQN-SDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
             L   G+D E++L+  + +  I   ++   ++      +A   +  +     P      
Sbjct: 193 SWLREAGIDPEAWLADPDGTPGIDRLVRRLLKVADDLYVRAESGIVRLPVGCRPGIYAAR 252

Query: 259 -ITESVLKHAQNHGFKIVSHSHTPN 282
            +   + +  +  G + V      +
Sbjct: 253 FLYAEIGREVERLGPQAVCRRAVVS 277


>gi|328886495|emb|CCA59734.1| Phytoene synthase [Streptomyces venezuelae ATCC 10712]
          Length = 316

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 83/289 (28%), Gaps = 7/289 (2%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
            +          +          +      L P   R ++S LY F   +  + D    P
Sbjct: 9   PEPSAPVQAAYSYCEAVTGQQARNFAYGIRLLPTEKRQAMSALYAFSRRVDDIGDGTLAP 68

Query: 71  ITRDMRLQWWKDIFES-STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
             +  RL+  + + +   T G+  +   P +V L    R++ +P     ++I+    D  
Sbjct: 69  EAKRERLEATRALLDRVRTGGVDEDDTDPVAVALADSARRFPIPLGGLDELIDGVLMDVR 128

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR----VIKYAGIAQFIGQLICQ 185
            ++       + Y   ++  +  ++  +  ++  +             G+A  +  ++  
Sbjct: 129 GETYETWDDLKVYCRCVAGAIGRISLGVFGTQPGARGADRAPEYADTLGLALQLTNILRD 188

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMR 244
           +      G+ Y P D L   G                +  +            +    + 
Sbjct: 189 VREDAGNGRTYLPADDLAKFGCADGFGSDTPPAGADFAGLVHFEVRRARALFAEGYRLLP 248

Query: 245 YILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            +             I   +L   +     ++    +     + +  + 
Sbjct: 249 MLDRRSGACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGREKAYVAVR 297


>gi|94982455|gb|ABF50046.1| phytoene synthase [Citrullus lanatus]
          Length = 249

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 78/243 (32%), Gaps = 8/243 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  +L  P  + ++  +Y +      + D         
Sbjct: 7   SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITP 66

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  W+   E   +             L   V ++ +  Q F DMIE    D       
Sbjct: 67  TALDRWEARLEELFQ---GRPFDMLDAALADTVTKFPVDIQPFRDMIEGMRMDLRKSRYK 123

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  I+           +        GIA  +  ++  +   
Sbjct: 124 NSDEPYLYCYYVAGTVGLMSVPIMGIAPDSQASTESVYNSALALGIANQLTNILRDVGED 183

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A + +  +   
Sbjct: 184 ARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKSQIKRARMFFDEAEKGVLELNKA 243

Query: 250 VFP 252
              
Sbjct: 244 SRW 246


>gi|193610757|ref|XP_001947127.1| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial-like
           isoform 1 [Acyrthosiphon pisum]
          Length = 300

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 51/275 (18%), Positives = 101/275 (36%), Gaps = 3/275 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
           + + L  +R  D++ YL  LL     R +   +  F+ E+  ++D   +    +MR ++W
Sbjct: 27  AKYCLELVRKHDFENYLCTLLLHKSIRRTGFAVRAFNIEVATLQDQISDMKIGEMRFKFW 86

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +       K  I     P  +EL +  +   L   Y   +I +      N S+   +  E
Sbjct: 87  ESSLTEIYKNKI--PKHPVLIELYTATKTQKLSIIYLKRLISSRENYMLNSSLKTIEDLE 144

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            YA    S + +L    +  +        + + G  Q I  +I  +P +   G++  P D
Sbjct: 145 TYAENSVSPVYYLFLEAMGIKDMK-VDHAVSHLGKCQGIINIIRGIPYNTKSGRISIPQD 203

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSIT 260
           IL    +  E+ +   +   +  AI   A     +L KA+   +     +    +P    
Sbjct: 204 ILLKYKVSYENIIRNSSEQNVRDAIYELASRANSHLMKAKSLEKEGNKRIKSVCLPFVPL 263

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              L+  +   F +          + P  +L   +
Sbjct: 264 HLYLEKLRLADFNVFDKKLQERNNLLPMKLLWRKM 298


>gi|148257675|ref|YP_001242260.1| phytoene synthase [Bradyrhizobium sp. BTAi1]
 gi|146409848|gb|ABQ38354.1| phytoene synthase [Bradyrhizobium sp. BTAi1]
          Length = 346

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 85/280 (30%), Gaps = 8/280 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D     R LR      + A  + P         LY F  E     D     +     L
Sbjct: 4   DEDIAICRRMLRGGSKTFFAASKVLPRSVGDPAIALYAFCREADDAIDGPGRRVDAVEVL 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
               +  +    G+  +  +     L  +V  + +P      ++E   +D+         
Sbjct: 64  ---HERLDRIYDGVPDD--NAVDRALARVVTHFAIPRPLPEALLEGLAWDAQGRRYETLS 118

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               YA R++  +  + ++++         R     GIA  +  +   +      G+LY 
Sbjct: 119 DVLAYAVRVAGTVGVMMSLLMHRRDAETIGRACD-LGIAMQLTNIARDVGEDARAGRLYL 177

Query: 198 PLDILGAVGLDRESFLSGQ-NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P   L   GLD E++ +     DRI         +   +  +A   +  +     P    
Sbjct: 178 PRQWLCEAGLDVETWRAAPFFDDRIGRVTARLLAVADVFYARAVAGIADLPWSCRPGIHA 237

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             +    +        F  +S     +   +   +  +++
Sbjct: 238 ARLIYAEIGAEVARAEFDSMSRRAVVSMRRKLQLLGKAAV 277


>gi|115749006|ref|XP_780647.2| PREDICTED: similar to putative phytoene synthase
           [Strongylocentrotus purpuratus]
          Length = 269

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 3/272 (1%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           +R  DY+ +L  LL P   R +   L  F+ EL  VRD+  N     MRLQ+WKD  E+ 
Sbjct: 1   MRKQDYEGFLVSLLMPDTSRSAAITLRAFNAELASVRDSVSNVHIGKMRLQFWKDGLENI 60

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
             G    S  P + EL   V ++ L  ++   MI+       +         E YA   S
Sbjct: 61  YAGKP--SHQPIAKELFKAVNRHKLSKRWLSQMIKERENTLEDKPFPSVADVETYAENTS 118

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           S L++L    L  +   A      + G +Q I  LI  +P+   R  +  P+++     L
Sbjct: 119 SSLLYLVLQSLGIQDVHA-DHAASHIGKSQGIVNLIRGIPLLAQRRDVLIPMELTIKYDL 177

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
            +E  + G     +       A L   +L  ARE  + + P   PAF+  +  ES LK  
Sbjct: 178 SQEDIIRGNRCQDMKDMTFELASLANSHLIHARELKKDVTPGAIPAFLATAPLESYLKRI 237

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           Q   F +   S +    + P  +   + +K +
Sbjct: 238 QRADFDVFHRSLSNRYPLLPAKIWLQNFRKTY 269


>gi|21225053|ref|NP_630832.1| phytoene synthase [Streptomyces coelicolor A3(2)]
 gi|4539164|emb|CAB39693.1| putative phytoene synthase [Streptomyces coelicolor A3(2)]
          Length = 312

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 80/281 (28%), Gaps = 7/281 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +          +      L P   R ++S LY F   +  + D       +  RL 
Sbjct: 13  AAYSYCEAVTGQQARNFAHGIRLLPTPKRRAMSALYAFSRRVDDIGDGVLADDVKVTRLD 72

Query: 79  WWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             + +      G + E    P +V L    R++ +P     ++I+    D   ++     
Sbjct: 73  ETRAVLARIQDGAVEEDDTDPVAVALADAARRFPIPLGGLDELIDGVQMDLRGETYETWD 132

Query: 138 QFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
             + Y   ++  +  L+  +  +E        +       G+A  +  ++  +      G
Sbjct: 133 DLKVYCRCVAGAIGRLSLGVFGTEPGARGAERAPEYADTLGLALQLTNILRDVREDAEGG 192

Query: 194 QLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           + Y P D L   G     +  +       +  +            +    +  +      
Sbjct: 193 RTYLPADDLAKFGCAAGFNGPTPPEGSDFAGLVHFEVRRARALFAEGYRLLPMLDRRSGA 252

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                  I   +L   +     ++    +     + +  + 
Sbjct: 253 CVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGREKAYVAVR 293


>gi|170748697|ref|YP_001754957.1| squalene/phytoene synthase [Methylobacterium radiotolerans JCM
           2831]
 gi|170655219|gb|ACB24274.1| Squalene/phytoene synthase [Methylobacterium radiotolerans JCM
           2831]
          Length = 292

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 2/260 (0%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
                +RD D DRY A L +P   R  L  LY F   + RVR+   NP+  ++RLQWW+D
Sbjct: 19  HCEGLVRDGDPDRYYATLFAPAAARPHLFALYAFSLTIARVREAVSNPMAGEIRLQWWRD 78

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             +   +G +    +P +  L   +R   L  Q F+D+I+A  FD Y D +      E Y
Sbjct: 79  ALQGEARGDV--RANPVAAALEETIRANRLGRQPFVDLIDARVFDLYEDPMPRVNDLEGY 136

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
               +S L  LA++++ +           +AG+A  I  L+  LP H   GQ+Y P DIL
Sbjct: 137 CGETASALFRLASLVIGNGTEPGGAGAAGHAGVAYGITGLLRALPWHARSGQVYLPADIL 196

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES 262
           G  G+ RE  ++G+    +  A      +  ++L         I P    AF+PV++ E 
Sbjct: 197 GRYGVTREDIVTGRGGPGLRRACADLRGIARQHLKAFEAARPTIAPSAGAAFLPVALVEP 256

Query: 263 VLKHAQNHGFKIVSHSHTPN 282
            L   +   +  ++      
Sbjct: 257 YLAVMERASYDPLNTLVELP 276


>gi|163868047|ref|YP_001609251.1| phytoene synthase [Bartonella tribocorum CIP 105476]
 gi|161017698|emb|CAK01256.1| phytoene synthase [Bartonella tribocorum CIP 105476]
          Length = 286

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 3/281 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              +    LR+ID DRY++ L +P   R +L+ LY F+ E+ R+R++  +P   ++RL+W
Sbjct: 4   SLPYSFDILRNIDRDRYISVLFAPKKKRKALAALYAFNAEISRIRESVHDPFIGEIRLRW 63

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W D              +P   +L + +  ++LP   FL   +A   D Y++ I      
Sbjct: 64  WYDSIAHGEMQTSG--NNPILSDLWAAMTLFNLPKTAFLRYCDAQILDLYHNPIETLHDL 121

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E+Y    +S ++ L+  +LD +       + ++ GIAQ +  ++  L     R   Y P 
Sbjct: 122 EYYCGETASIILQLSCQVLDPDAAQDFTDIYEHGGIAQGLSGVLRLLSFMQSRYHYYLPT 181

Query: 200 DILGAVGLDRESFLSGQNSDRIS-LAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
           D+L AVG++R+   S   SD+     ++    L   +  K       +   + PAF+P+ 
Sbjct: 182 DMLKAVGVNRKDLDSHHLSDQQKGHIVEAMVALSRDHYSKFYAYSHALPRALKPAFLPLV 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           I  + L+ A      I   S T   + R W +  ++I   F
Sbjct: 242 IIPASLQKALQLRSAIFQESATLPLIHRYWLITRAAISGNF 282


>gi|320105014|ref|YP_004180605.1| squalene synthase HpnC [Isosphaera pallida ATCC 43644]
 gi|319752296|gb|ADV64056.1| squalene synthase HpnC [Isosphaera pallida ATCC 43644]
          Length = 333

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 86/281 (30%), Gaps = 3/281 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +   ++     R    +  +    +P   R  +  +Y F      + D   +P   +  
Sbjct: 26  LAEAQVYCAHLARSHYENFQVIGWFTPKEARTGMEAIYAFCRWADDLGDEVGDPARSERL 85

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L WW+D   +        +  P  V L   + +++L  + F ++I A   D +     + 
Sbjct: 86  LVWWRDQLRAVFA-DPTSARHPVFVALAPTITRFNLELEPFENLISAFIQDQHVYEYQND 144

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            Q   Y  R ++ +  L   + +++   A             +      +      G++Y
Sbjct: 145 AQLLDYCRRSANPVGRLVLKLAEADD-PARREWSDAICTGLQLANFWQDVACDLDIGRIY 203

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI-LPDVFPAFI 255
            P      +G   E   + + +                YL +       +  P      +
Sbjct: 204 LPRSDRWELGYSDEDLHARRYTPAYRALSSRKVAQARAYLERGEPLAASLGPPWNRAVEL 263

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                 ++L+  +     + +      +  +   M   ++K
Sbjct: 264 FRLGGLAILRAIEACNHDVWTMRPVVGRWTKLALMAQVALK 304


>gi|49474118|ref|YP_032160.1| hypothetical protein BQ04820 [Bartonella quintana str. Toulouse]
 gi|49239622|emb|CAF25981.1| hypothetical protein BQ04820 [Bartonella quintana str. Toulouse]
          Length = 286

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 3/277 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR  D DRY++ L +P   R +L+ LY F+ E++RVR++  +P+  ++RL+WW D
Sbjct: 7   YSLNILRATDRDRYISVLFAPKKKRRALAALYAFNAEVVRVRESVHDPLIGEIRLRWWYD 66

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                   +     +P   +L   +  ++LP   FL   +A   D Y++ I      + Y
Sbjct: 67  SIAH--SEMQKSESNPILNDLFMAITLFNLPKTAFLRYCDAKILDLYHNPIATLHDLKLY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
               +S ++ L+  ILD +         +  GIAQ +  ++  L     R Q Y P DIL
Sbjct: 125 CGETASIILQLSCQILDPDAAQDFTDAYEQGGIAQGLSGVLRLLSFMQSRYQYYLPSDIL 184

Query: 203 GAVGLDRESFLSGQ-NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
            AVG++RE   S + ++++    I+    L   +  +  E    +   + PAF+P++I  
Sbjct: 185 KAVGVNREELESDRISNEQKCHIIETMVALSQDHYTRFYEHFSALPKTLKPAFLPLAIIP 244

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           + L+ A   G  +   S T   L R W++  ++I   
Sbjct: 245 ASLQKAVQLGAAVFQESATLPLLHRYWFITKAAISGN 281


>gi|86749846|ref|YP_486342.1| phytoene synthase [Rhodopseudomonas palustris HaA2]
 gi|86572874|gb|ABD07431.1| phytoene synthase [Rhodopseudomonas palustris HaA2]
          Length = 287

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 79/274 (28%), Positives = 124/274 (45%), Gaps = 4/274 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             +R  D+DRY A L   P  R +L  LY F+ E++RVRD    P+  ++RLQWW D   
Sbjct: 16  ELVRSHDFDRYAATLFVEPPRRRALLALYAFNVEVVRVRDQVSQPLPGEIRLQWWTDTLA 75

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
            +         +P + ELL    Q+ LP      +IE H FD YND +      E YA  
Sbjct: 76  GTAH--GGIEGNPVAAELLRATGQHGLPVAALAQLIETHLFDLYNDPMPTLTVLEAYAAD 133

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
               L  LA  ILD     A   + ++AG+AQ   + I +LPI   R Q + PL++L A 
Sbjct: 134 TDGALFALAARILDQGS-EAVDHLARHAGVAQGFARAIARLPIDAARRQCFVPLELLAAH 192

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
           G       +G+ +  + L +        ++   A   +  + P    AF+P+++ +  L 
Sbjct: 193 GSSEAEVYAGRATPALRLTLDALIAEAQRHCDAALRLLAEVPPPARRAFLPLALAQRDLD 252

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                G  + +  H  ++L   W +  +S  + F
Sbjct: 253 RLAQPGTDLFA-PHERSRLATLWTLWKASRTRAF 285


>gi|297565913|ref|YP_003684885.1| Phytoene synthase [Meiothermus silvanus DSM 9946]
 gi|296850362|gb|ADH63377.1| Phytoene synthase [Meiothermus silvanus DSM 9946]
          Length = 280

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 90/282 (31%), Gaps = 7/282 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
              D   V   +R      Y   LL     R  +  +Y          D + +P   +  
Sbjct: 1   MEPDWKAVAATIRHHSATFYYGSLLFRGEARKGIWAVYAACRTGDDAVDASSDP---EGE 57

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+ W +  E + +   A    P+   L   + ++++P + F DM +    D       + 
Sbjct: 58  LERWWEGIERAYQ---ARPQQPWECGLAWALERWEIPQEAFADMRQGFASDLEPVRPHNL 114

Query: 137 KQFEHYAFRISSRLIHLATMILDSE-RYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            +   Y +R++  +  + T I                 G A  +   +  +      G++
Sbjct: 115 DELLLYCYRVAGTVGRMITPIAGVRLEGGGVEEAAIKLGQAMQLTNCLRDVGEDLAMGRV 174

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P +++   GL  +              ++  A +  +   +    +RY+        +
Sbjct: 175 YLPAELMHRYGLGIDDLHQRTIQPPYVGLMRELASVARRLYREGLGGLRYLQQGRAAIAL 234

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                E +L   +  G+  +S   +     R   +  +   +
Sbjct: 235 AALQYEGILDKLERSGWNNLSSRASLKTYERLLLLPRAIWIR 276


>gi|222148959|ref|YP_002549916.1| phytoene synthase [Agrobacterium vitis S4]
 gi|221735945|gb|ACM36908.1| phytoene synthase [Agrobacterium vitis S4]
          Length = 270

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 113/273 (41%), Positives = 158/273 (57%), Gaps = 3/273 (1%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            LR+ID DRYLACLLSPP  + +L+ LY F+ EL RVRD  R P+  ++RLQ+W+D+   
Sbjct: 1   MLREIDRDRYLACLLSPPEKQPALAALYAFNAELARVRDLVREPLPGEIRLQYWRDLLSG 60

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
              G      +P +  LL+ V  Y LP Q  LDMI+A   D Y+D I      E YA   
Sbjct: 61  KGHGDTT--ANPLAAGLLAAVESYRLPVQPLLDMIDARIADLYDDPIGPRSALEGYAGET 118

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +S LI LA+++LD+        +  +AG+AQ I  L+  +P H  RGQLY P +IL A G
Sbjct: 119 ASALIQLASLVLDAGAALNCATIAGHAGVAQSIAGLLALMPQHRARGQLYIPDEILAATG 178

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKH 266
           LDRE+FLSG++  RI  AI+ FA LGL +L KAR     +   + PA++PV++   +L+ 
Sbjct: 179 LDREAFLSGRDEMRIDGAIEAFAGLGLDHLAKARAG-GKLPASLVPAYLPVALAGPILRD 237

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           A+  G  I+       Q  R   +L +S+  RF
Sbjct: 238 ARRRGADILQTPIRRAQWRRQLTLLRASMTGRF 270


>gi|255537023|ref|XP_002509578.1| protein with unknown function [Ricinus communis]
 gi|223549477|gb|EEF50965.1| protein with unknown function [Ricinus communis]
          Length = 351

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 105/299 (35%), Gaps = 17/299 (5%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
                     +  +R  DY  YL  L  PP  R +   L  F+ E  R  D A +P    
Sbjct: 56  SSLRAAFSHCVEQVRSYDYHHYLCLLELPPHMRKAAFALRAFNVETARAMDVASDPRIGL 115

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---D 131
           MRL WW++  +      + E   P +  L S + +Y +   +    +EA   D+     D
Sbjct: 116 MRLLWWQETIDKIYANKLIE--HPTAQALSSAISEYKITKGWLKRSVEARINDARREVTD 173

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                ++ E YA    S ++++          +A      + G A  +  L+  LP H  
Sbjct: 174 IPETIEELEKYAEDTVSTILYMTLQAGGIRSTAA-DHAASHVGKASGLLLLLRSLPYHAS 232

Query: 192 RG--QLYFPLDILGAVGLDRESFLSGQ----NSDRISLAIKIFAELGLKYLFKAREEMRY 245
           R     Y P ++    GL  +     +    + + +   +   A +   +L KAR     
Sbjct: 233 RNRHFSYIPSEVAAKHGLLVKERGRPEIRIDSREGLCDTVFEIASVANVHLQKARALAGT 292

Query: 246 ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
           +  +  P  +P    + +L       F +              L+    +  SS + R+
Sbjct: 293 VPVEARPVLLPAVPAQVLLDSLSEVQFDVFDPRLERGILGIPPLLYQLKLKWSSWRGRY 351


>gi|302557116|ref|ZP_07309458.1| squalene synthase HpnD [Streptomyces griseoflavus Tu4000]
 gi|302474734|gb|EFL37827.1| squalene synthase HpnD [Streptomyces griseoflavus Tu4000]
          Length = 316

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 88/300 (29%), Gaps = 12/300 (4%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           +++ +  +T     + +    +          +      L P   R ++S LY F   + 
Sbjct: 1   MIRTVESHTPASAPVLA-AYSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVD 59

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDM 120
            + D       +  RL+  + +     +G + E    P +V L      + +P     ++
Sbjct: 60  DIGDGPLADDVKVTRLEDTRALLTRIREGAVDEDDTDPVAVALAHAAGHFPIPLGGLDEL 119

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL----RVIKYAGIA 176
           I+    D   ++       + Y   ++  +  L+  +  +E  +             G+A
Sbjct: 120 IDGVQMDVRGETYETWDDLKAYCRCVAGAIGRLSLGVFGTEPGARGAERASEYADTLGLA 179

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR---ISLAIKIFAELGL 233
             +  ++  +      G+ Y P D L   G       +G         +  +        
Sbjct: 180 LQLTNILRDVREDAAGGRTYLPADDLAKFGCSAG--FAGPTPPEGSDFTGLVHYEVRRAR 237

Query: 234 KYLFKAREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
               +    +  +             I   +L   +     ++    +     + +  + 
Sbjct: 238 ALFAEGYRLLPLLDRRSGACVAAMAGIYRRLLDRIERDPGAVLRGRVSLPGHEKAYVAVR 297


>gi|315659805|ref|ZP_07912664.1| dehydrosqualene synthase [Staphylococcus lugdunensis M23590]
 gi|315495093|gb|EFU83429.1| dehydrosqualene synthase [Staphylococcus lugdunensis M23590]
          Length = 287

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 31/275 (11%), Positives = 88/275 (32%), Gaps = 9/275 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                  +  + ++        A    P   R ++  +Y     +    D   +P     
Sbjct: 2   TLDDHFQYCHQLMKHHSKSFSYAFDYLPDRERRAVWAIYAVCRVIDDSIDVHHDPQY--- 58

Query: 76  RLQWWKDIFESSTKGLIAE---SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            LQ+ +    +  +  +     S +       ++   + +    F  +I+    D Y + 
Sbjct: 59  -LQYIRQDIMAIEQQQLHPEFQSDARIMHAFSNVAHTFKMEYPAFYKLIDTVRKDQYFEQ 117

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               +    Y + ++  +  + T IL  +  + + RV +  G A  +  ++  +   + +
Sbjct: 118 FDTDEAMLDYCYGVAGTVGEVLTPILAQQPTTETFRVARKLGEALQLTNILRDVGEDFEQ 177

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G++Y   + L    +D +       +       +  A +  +    A   +        P
Sbjct: 178 GRIYISKERLAHFNIDIKQQYQQGVTSNYIKMWEALAYIAEQAYHDALSNIHVFNKQAQP 237

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
              +   I   +L   +  G+  +      +++ +
Sbjct: 238 IIELAAVIYAGILDEVRKAGY-TLHQRVYVSKVDK 271


>gi|256371285|ref|YP_003109109.1| Squalene/phytoene synthase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007869|gb|ACU53436.1| Squalene/phytoene synthase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 294

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 84/275 (30%), Gaps = 6/275 (2%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
               R      YLA  L  P  R  +  +Y F      + D +     +   L   + + 
Sbjct: 12  RSVARRYGRTYYLASRLLEPDARPGIWAIYAFCRRADDIVDGSATTDEKRRGLDELEAML 71

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                 +   S  P    L+S   ++ +  +     + A   D              Y  
Sbjct: 72  --CQALVRGGSDDPALDALVSTYERWQIEPETLARFLGAMRRDLTVRRYQRWDDLLDYME 129

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             ++ +  +   I       A+    +  G+A  +   I  +     RG++Y PL+ +  
Sbjct: 130 GSAAVIGEMVLPI--LGGPPAAREPARALGLAFQLTNFIRDVGEDLDRGRIYLPLEDVAN 187

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESV 263
            G   +  L+ + S  +   ++   E        +      +             +  ++
Sbjct: 188 HGAL-DDLLARRPSPAVRALVRFEIERARTLYRDSLAGDPLLPRASRRCVEVARELYSAI 246

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +   + + + +++      +  R   ++ + +  R
Sbjct: 247 MLEVERNDYDVLTRRAIVPKRRRAAEVVRALVAPR 281


>gi|86357462|ref|YP_469354.1| phytoene synthase protein [Rhizobium etli CFN 42]
 gi|86281564|gb|ABC90627.1| phytoene synthase protein [Rhizobium etli CFN 42]
          Length = 281

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 111/281 (39%), Positives = 161/281 (57%), Gaps = 3/281 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             +    L  LRD D DRYLACLLSP   R +L+ LY F+ EL RVRD    P+  ++R+
Sbjct: 3   ETNQDICLAMLRDNDRDRYLACLLSPEEKRGALAALYAFNAELARVRDLVHEPLPGEVRM 62

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           Q+W+D+ E S     + + +P +  LL+ +  + LP +  +DMI+A  FD Y+D +    
Sbjct: 63  QYWRDLLEGSAH--GSTAANPVAAGLLNAIETHRLPRKTLVDMIDARTFDLYDDPMETRV 120

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             E YA   +S LI LA+++L  E    S     +AG+AQ I  L+  +P+H  RGQLY 
Sbjct: 121 SLEGYAGETASALIQLASLVLSPEEAPRSADAAGHAGVAQAIAGLLLLMPLHRRRGQLYI 180

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           PL IL A GLDR++FL+G++   +S AI+ FA LGL++L KAR     I P VFPAF+P 
Sbjct: 181 PLQILSATGLDRDAFLAGEDRSHVSAAIEAFAGLGLEHLAKAR-GAGSIAPAVFPAFLPA 239

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           ++ E VL  AQ  G  +        Q  R   M  ++ +++
Sbjct: 240 TLAEPVLLKAQRQGALLFDRPLQSPQWRRQLRMALAASRRK 280


>gi|257792010|ref|YP_003182616.1| Squalene/phytoene synthase [Eggerthella lenta DSM 2243]
 gi|257475907|gb|ACV56227.1| Squalene/phytoene synthase [Eggerthella lenta DSM 2243]
          Length = 292

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 89/269 (33%), Gaps = 9/269 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D  +    +R   +  Y A  L P   R S+  LY F        D          +L
Sbjct: 11  ADDFAWCEDVIRRNSHSFYRAFSLLPACKRQSVYALYAFCRLADDCVD----RDASAAKL 66

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +  +D       G + ++  P    L ++   +DL  Q F DM+E    D          
Sbjct: 67  EQVQDDLARFFAGTVVDA--PLWRALDAVCSSFDLDAQPFFDMLEGQRRDLSFRQPETMG 124

Query: 138 QFEHYAFRISSRLIHLATMILD--SERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
             E Y + ++  +  +   IL   S             G+A  +  ++  +      G++
Sbjct: 125 DLEEYGYYVAGSVGLMLLPILHAASPVDDGLRDSAVALGVAMQLTNILRDVGEDLENGRV 184

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAF 254
           Y P ++L A     E   +    +    A +  A    +       ++  +  D   P  
Sbjct: 185 YLPAEVLEAASYAPERLRAHAVDEAFRNAWETVAHRSEELYRPMERDVIELDDDSRLPTL 244

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             + +   +L   +  G++   H    ++
Sbjct: 245 SSLYLYRGILDEVRADGYRCFEHRVVVSK 273


>gi|298291855|ref|YP_003693794.1| Squalene/phytoene synthase [Starkeya novella DSM 506]
 gi|296928366|gb|ADH89175.1| Squalene/phytoene synthase [Starkeya novella DSM 506]
          Length = 286

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 3/276 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D       +R++D DRY+A L +P   R +L  L+ F+ E+ RVR+   NP+  ++RLQ
Sbjct: 4   ADIAHCTELVRELDRDRYIADLFAPADERGALFALHAFNVEIARVREAITNPMAGEVRLQ 63

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW +      +G +    +P +  LL  +  + LP + F  +++A  FD Y+D +     
Sbjct: 64  WWSEALIGGARGDV--RANPVAAALLDTIHAHRLPRETFFALLDARIFDLYDDPMPTVND 121

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            E YA   SS LI LAT++L +     S     +AG+A  +  L+   PIH  RGQ Y P
Sbjct: 122 LEGYAGETSSALIRLATLVLSNGEGVDSAEAAGHAGVAYAVTGLLRAFPIHARRGQCYVP 181

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
           LD+L   GL R++ +SG+ S  +  A+     L  ++   A   +  + P   PAF+P+ 
Sbjct: 182 LDLLKKHGLTRDNAVSGRASPALKAALADMRALARRHYEAALAALAGVDPAELPAFLPLM 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           +    L+                  L R W +   +
Sbjct: 242 LVPGDLRRMGR-PHDPFKAVPAMPPLARLWRLWRGA 276


>gi|118468542|ref|YP_886690.1| phytoene synthase [Mycobacterium smegmatis str. MC2 155]
 gi|118169829|gb|ABK70725.1| phytoene synthase [Mycobacterium smegmatis str. MC2 155]
          Length = 315

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 89/295 (30%), Gaps = 10/295 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           ++ +                   +LA  L  P  R ++  LY F      + D     + 
Sbjct: 12  DDPMLREAYRRCREINAAHGRTFFLATRLLAPDQRPAVHALYGFARYADDILDEFDPTLD 71

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              R +  + + +            P    +   V +Y + ++ F D + +   D     
Sbjct: 72  TAARARQLQLLADQFFA-RAEHPGDPVLTAVGHTVARYGIADELFEDFLRSMRMDLSVTD 130

Query: 133 IFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
             D    E Y    +  +   L  ++        +       G A  +   +  +     
Sbjct: 131 YADRAALEEYMRGSAEAIGLQLLPILGTVTAPEEAAPHAAALGRAFQLTNFLRDVDEDLL 190

Query: 192 RGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           R ++Y P D L   G+DR+  +    +     R+  A++   E+  +    A E +  + 
Sbjct: 191 RDRVYLPADELAVHGVDRDLLMWCHHNQHTDSRVRKALQAQHEIARRTYRYAAEGIAMLA 250

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM---LSSSIKKR 298
           P   P       +   +L   +   F I     T     R       L  + + R
Sbjct: 251 PRSRPCVATAMQLYSEILDCIEESDFAIFRRRATVGTRRRIQVAGAGLIHAWRAR 305


>gi|254460371|ref|ZP_05073787.1| phytoene synthase [Rhodobacterales bacterium HTCC2083]
 gi|206676960|gb|EDZ41447.1| phytoene synthase [Rhodobacteraceae bacterium HTCC2083]
          Length = 347

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 94/280 (33%), Gaps = 8/280 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D       +R      + A  L P   R     LY F        D   N +   + LQ
Sbjct: 5   DDLEHCREVIRTGSLSFHAASKLLPGSVRDPALALYAFCRLADDEVDEGSNKVAAVLDLQ 64

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
              D+  + T        +P      ++  ++D+P      ++E   +D+          
Sbjct: 65  ARLDLVYAGT-----PRNAPEDRAFAAVCERFDMPRALPEALLEGLAWDAVERRYETLSD 119

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y+ R++S +  +  +++      A  R     G+A  +  +   +      G++Y P
Sbjct: 120 VRGYSARVASAVGAMMCVLMRVRDADALARACD-LGVAMQLTNIARDVGEDARAGRIYLP 178

Query: 199 LDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           L+ +   G+  ++F+S  Q S  +   +K       +   ++   +  +  +        
Sbjct: 179 LEWIEGSGMTPDAFMSDPQASLAVRKMVKRLLAEARRLYIRSETGISSLPLNARTGIFAA 238

Query: 258 S-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             I  ++           ++H    N + +   +  S ++
Sbjct: 239 RFIYAAIGTQLTRLKHDSINHRARTNTVHKLGLIGISGLR 278


>gi|302526349|ref|ZP_07278691.1| squalene synthase HpnD [Streptomyces sp. AA4]
 gi|302435244|gb|EFL07060.1| squalene synthase HpnD [Streptomyces sp. AA4]
          Length = 303

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 85/283 (30%), Gaps = 10/283 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-ARNPITRD 74
                        ++   + Y    L PP  R +L  +Y     +  + D  A +  T+ 
Sbjct: 20  TVDEAYAHCAAVTKEQARNFYYGIRLLPPGKRAALCAVYALARIIDDIGDDTAASAETKL 79

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L   +           + +  P  V +    R+Y +P   F ++++    D       
Sbjct: 80  QGLAGVRKALGDL-----SSTADPVYVAVADAARRYPIPLGAFEELLDGVEMDVTGREYV 134

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
             ++   Y   ++  +  L   +  S     +       GIA     ++  +      G+
Sbjct: 135 RFEELVEYCRCVAGSVGRLCLGVFGSRPEPNAPVYADELGIALQQTNILRDIREDLLNGR 194

Query: 195 LYFPLDILGAVGLDRESFLSGQNSD---RISLAIKIFAELGLKYLFKAREEMRYIL-PDV 250
           +Y P + L   G++      G+ +D    ++  I   A     +  +    +  +     
Sbjct: 195 VYLPKEDLDRFGVELSVGPDGKLADPEGGLAALIHDSATRARDWYARGLRLVPSLDGRSA 254

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                   I  ++L        ++     + +   +      +
Sbjct: 255 ACCTAMSGIYRTLLDRIDEQPARVFDRRLSLSGREKAVVAFRA 297


>gi|269839080|ref|YP_003323772.1| squalene/phytoene synthase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790810|gb|ACZ42950.1| Squalene/phytoene synthase [Thermobaculum terrenum ATCC BAA-798]
          Length = 279

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 92/280 (32%), Gaps = 7/280 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
              D     R  R   +  Y +  + PP  R  +  LY F        D     +    +
Sbjct: 1   MVSDLEICRRIFRKYSWTYYYSTQMLPPDVRKRVWVLYAFFRLADEHVDNP--VLEPAEQ 58

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+ +++  +         S  P     + + RQ+ +   +    +++   D         
Sbjct: 59  LRAFREDVD--FAWSRGTSREPVLRCFVRVARQHGIERPWVEAFLDSMEMDLTVSCYPRY 116

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y +  +  +  +   ++      A L   +  G A  I   +  +   + RG++Y
Sbjct: 117 SDLERYVYGSAEVVGLMMARVM--RAPDAGLDHARLLGHAMQITNFLRDVAEDHARGRIY 174

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            PL+ L   G+D  S+  G    R    +       ++   +A + +RY+ P       +
Sbjct: 175 IPLEDLSRFGIDPSSWGPGVPEGRFRALMAHQIRRNMRQYMEAHQGLRYVPPACRFGVAL 234

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                +SVL         +  +     +   P  +  ++ 
Sbjct: 235 ASFSYQSVLYRISRDPVSVWHNRVKNARGDYPPVLWRAAY 274


>gi|192291543|ref|YP_001992148.1| phytoene synthase [Rhodopseudomonas palustris TIE-1]
 gi|192285292|gb|ACF01673.1| putative phytoene synthase [Rhodopseudomonas palustris TIE-1]
          Length = 290

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 6/276 (2%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            +R+ D+DRY A L  PP  R SL  L  F+ E++RVR     P+  ++RLQWW D+   
Sbjct: 17  LVREADFDRYAATLFVPPEKRRSLFALAAFNAEIVRVRSQVSQPLPGEVRLQWWTDLLAG 76

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
           +         +P + EL   + ++ LP +    +IEAH FD YND + D    E +    
Sbjct: 77  TAH--GGAEGNPVAAELTRAIAEHALPVEPLTRLIEAHIFDLYNDPMPDWTVLEPHLAET 134

Query: 147 SSRLIHLATMILDS---ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
              LI L   +L     +   A   V ++AG+   + +++ +LP    R QLY P D+L 
Sbjct: 135 EGALISLTAWVLAQGAGQASDAVEHVARHAGVVVGVARIVARLPYDSARRQLYLPNDVLQ 194

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESV 263
             G D E   SGQ++  +  A+        K+L +A +E+  +   V PAF+P+++    
Sbjct: 195 RHGCDLEQVFSGQSTAALRAALTEVVAEARKHLDQAFQELIELPAAVRPAFLPLALACRD 254

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           L           +     ++L   W +  +S  K F
Sbjct: 255 LDSLAAPERDPFT-PFERSRLATLWTLWRASRSKPF 289


>gi|149914256|ref|ZP_01902787.1| phytoene synthase [Roseobacter sp. AzwK-3b]
 gi|149811775|gb|EDM71608.1| phytoene synthase [Roseobacter sp. AzwK-3b]
          Length = 348

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 88/277 (31%), Gaps = 8/277 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           I  RD    +  +R      + A  L P   R     LY F        D         +
Sbjct: 2   IDPRDMEHCVEAIRHGSLSFHAASRLLPRSLRDPALALYAFCRLADDAVDLHDAKADAVL 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L    +  + +  G      +P      +++  +D+P      ++E   +D+       
Sbjct: 62  SL---HERLDKAYAGRP--RNAPADRAFTAVIEDFDMPRALPEALLEGLAWDAGGRRYAS 116

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
             +   Y+ R++S +  +  +++      A  R     G+A  +  +   +      G+L
Sbjct: 117 LSELRAYSARVASAVGVMMCVLMRVRDRDALARACD-LGVAMQLTNIARDVGEDAREGRL 175

Query: 196 YFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           Y P + +   GL  E+FL S +    ++  ++           +    +  +     P  
Sbjct: 176 YMPTEWMEQEGLAPEAFLESPRPCPEMASMVRRLLREADDLYVRGGAGIAALPLACRPGI 235

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                I   +    +  G   VS         +  ++
Sbjct: 236 FAARHIYAGIGGQVRAAGHDSVSRRARTGGWQKMGWL 272


>gi|90419394|ref|ZP_01227304.1| possible squalene/phytoene synthase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336331|gb|EAS50072.1| possible squalene/phytoene synthase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 279

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 4/280 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S +    LR +   D DR ++    P   R  ++ LY F+ E  RVRD+   P+  ++R
Sbjct: 4   LSENYAECLRLVEAADRDRAISLAFVPADKRDDVAALYAFNIETARVRDSVSEPMPGEIR 63

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D            +  P +  +   + +++LP   F   +EA  FD Y+D +   
Sbjct: 64  LQWWRDAL---AAPDQGAAGHPVAAAVADTIARHELPRAAFDRFLEARIFDLYDDPMPSS 120

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++ E YA   +S LI L  M+L  +          +AG+AQ +  ++  LP H  R Q++
Sbjct: 121 EELEAYAGETASTLIMLTAMVLARDAAETQADAAGHAGVAQTVAGVLRLLPQHRARRQVF 180

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P DIL A G   E  + G+       AI      G +++     E+  I   + PAF+P
Sbjct: 181 VPADILAAAGCSTEELIRGEREPA-GRAIAAMTAFGRQHVRAWMAELGDIPKPLRPAFLP 239

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            ++    L   +  G   +        L + +    +  +
Sbjct: 240 AALAGRYLDLIERDGAAALDQPVEIGPLRKVYINWRTMRR 279


>gi|77164555|ref|YP_343080.1| squalene/phytoene synthase [Nitrosococcus oceani ATCC 19707]
 gi|254433749|ref|ZP_05047257.1| Squalene and phytoene synthases superfamily [Nitrosococcus oceani
           AFC27]
 gi|76882869|gb|ABA57550.1| Squalene/phytoene synthase [Nitrosococcus oceani ATCC 19707]
 gi|207090082|gb|EDZ67353.1| Squalene and phytoene synthases superfamily [Nitrosococcus oceani
           AFC27]
          Length = 286

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 101/279 (36%), Gaps = 6/279 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + L  P   R +++ LY +  E++ +     +      +LQWW+
Sbjct: 5   EYCHNKATPPGSSLYYSLLFLPEAQRHTVTALYAYQKEIVGIVAECSDVGVAQTKLQWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +       G       P +  L + ++ YDLP Q FL +I     D    +    +    
Sbjct: 65  EEITRLFAGC---PRHPVTQTLATPIKTYDLPQQSFLQVIGGAASDLEQSTYPSFQALTT 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y ++I+  +  +A  I   +         +  GIA  +  ++  +     RG++Y P + 
Sbjct: 122 YCYQIAGVISLMAAEIYGYQDSET-RTYAENLGIALQLTHILRNVRQDADRGRIYLPQEE 180

Query: 202 LGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSI 259
           L    +  E+  +   NS  ++  +   A     Y   A   +              +++
Sbjct: 181 LTRFQVSSEAIFTSYANSQGMTALLAQQAGQTRHYFRSALANLGKHDRQTQYAGLTQIAL 240

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             ++L   +  G+ ++    +   L + W    +S + R
Sbjct: 241 GLNILNTMEEDGYPVLQRRTSLTPLRKLWIAWRTSRRAR 279


>gi|317488644|ref|ZP_07947186.1| squalene/phytoene synthase [Eggerthella sp. 1_3_56FAA]
 gi|325831711|ref|ZP_08164928.1| phytoene/squalene synthetase [Eggerthella sp. HGA1]
 gi|316912250|gb|EFV33817.1| squalene/phytoene synthase [Eggerthella sp. 1_3_56FAA]
 gi|325486582|gb|EGC89031.1| phytoene/squalene synthetase [Eggerthella sp. HGA1]
          Length = 292

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 89/269 (33%), Gaps = 9/269 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D  +    +R   +  Y A  L P   R S+  LY F        D          +L
Sbjct: 11  ADDFAWCEDVIRRNSHSFYRAFSLLPACKRQSVYALYAFCRLADDCVD----RDASAAKL 66

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +  +D       G + ++  P    L ++   +DL  Q F DM+E    D          
Sbjct: 67  EQVQDDLARFFAGTVVDA--PLWRALDAVCSSFDLDAQPFFDMLEGQRRDLSFRQPETMG 124

Query: 138 QFEHYAFRISSRLIHLATMILD--SERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
             E Y + ++  +  +   IL   S             G+A  +  ++  +      G++
Sbjct: 125 DLEEYGYYVAGSVGLMLLPILHAASPVDDGLRDSAVALGVAMQLTNILRDVGEDLENGRV 184

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAF 254
           Y P ++L A     E   +    +    A +  A    +       ++  +  D   P  
Sbjct: 185 YLPAEVLEAASYAPERLRAHAVDEAFRNAWETVAHRSEELYRPMERDVIELDDDSRLPTL 244

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             + +   +L   +  G++   H    ++
Sbjct: 245 SSLYLYRGILDEVRADGYRCFEHRAVVSK 273


>gi|29828195|ref|NP_822829.1| squalene/phytoene synthase [Streptomyces avermitilis MA-4680]
 gi|29605297|dbj|BAC69364.1| squalene/phytoene synthase [Streptomyces avermitilis MA-4680]
          Length = 316

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 32/295 (10%), Positives = 83/295 (28%), Gaps = 7/295 (2%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
              ++ +           +          +      L P   R ++S +Y F   +  + 
Sbjct: 3   RTVESEQHVSAPVLAAYSYCETVTGQQARNFAYGIRLLPTPKRRAMSAVYAFSRRVDDIG 62

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEA 123
           D A  P  +  RL+  + +      G + E    P +V L     Q+ +P     ++I+ 
Sbjct: 63  DGALAPDVKAARLEDTRALLSRVRDGRVDEDDTDPVAVALAHAAEQFPIPLGGLDELIDG 122

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL----RVIKYAGIAQFI 179
              D   ++       + Y   ++  +  ++  +  +E  +             G+A  +
Sbjct: 123 VLMDVRGETYETWDDLKVYCRCVAGAIGRVSLGVFGTEPGARGAERASEYADTLGLALQL 182

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFK 238
             ++  +      G+ Y P D L   G                +  +            +
Sbjct: 183 TNILRDVREDAEGGRTYLPADDLAKFGCSAGFDRPIPPEGSDFAGLVHFEVRRARALFAE 242

Query: 239 AREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
               +  +             I   +L   +     ++    +     + +  + 
Sbjct: 243 GYRLLPMLDRRSGACVAAMAGIYRRLLDRIEREPEAVLRGRVSLPGREKAYVAVR 297


>gi|162448851|ref|YP_001611218.1| phytoene synthase [Sorangium cellulosum 'So ce 56']
 gi|161159433|emb|CAN90738.1| Phytoene synthase [Sorangium cellulosum 'So ce 56']
          Length = 318

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 92/291 (31%), Gaps = 4/291 (1%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R   +  + D       LR        A LL P   R   +  Y F        D    
Sbjct: 2   HRSSPEASAADFAACRDLLRKGSKSFAAAALLLPARVREPAAAFYAFCRVADDAVDELGE 61

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESIS-PFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                        + E   +         P    L  ++ ++ LP  +   ++E   +D+
Sbjct: 62  HAPPAAAAAAVAALRERLARAAAGRPDDSPVDRALAHVMAEHGLPRAFIEALLEGFAWDA 121

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                        YA R++  +    + ++ +    A  R     G+A  +  +   +  
Sbjct: 122 EGRRYETLSDLNAYAARVAGTVGATMSTLMGARGPDALARACD-LGVAMQLTNIARDVGE 180

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQN-SDRISLAIKIFAELGLKYLFKAREEMRYIL 247
              RG++Y PL  +   G+  + +L+     DR+   +            +A   +  + 
Sbjct: 181 DARRGRIYLPLAWMREAGIAPDGWLARPVFDDRLGRLVARLLAEAEALYLRAGAGIPMLP 240

Query: 248 PDVFPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            D  PA     +    + +     GF  VS     +   + W +L + +++
Sbjct: 241 RDCRPAIQAARLIYADIGRVIARRGFDSVSTRAVVSPGRKAWLVLRALLRR 291


>gi|145222436|ref|YP_001133114.1| squalene/phytoene synthase [Mycobacterium gilvum PYR-GCK]
 gi|315442883|ref|YP_004075762.1| phytoene synthase [Mycobacterium sp. Spyr1]
 gi|145214922|gb|ABP44326.1| phytoene synthase [Mycobacterium gilvum PYR-GCK]
 gi|315261186|gb|ADT97927.1| phytoene synthase [Mycobacterium sp. Spyr1]
          Length = 314

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 8/282 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +K   +      R         +LA  L  P  R ++  LY F      V D+  +    
Sbjct: 13  DKDLRQAYRECRRLNAQHGKTFFLATRLLTPAQRPAVHALYGFARRADDVLDSFDDRSVA 72

Query: 74  DM--RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                LQ       +           P    +    R Y +  Q F D + +   D    
Sbjct: 73  ARADELQNLATALFTRLVEKQHSGNDPVLDAVEDTARHYRIDWQLFDDFLASMRMDLTIT 132

Query: 132 SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
              D    + Y +  +  +   +  ++        +       G A  +   +  +    
Sbjct: 133 DYPDRAALDRYIYGSAEVIGLQMLPVLGTVVPREEAAPYAAALGKAFQLTNFLRDIDEDL 192

Query: 191 HRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P D L A G+DRE       + +   R+  A+     L  +   +A   +  +
Sbjct: 193 TRGRVYLPADELAAHGVDREVLTWCQRNRRTDRRLRAALVEQHALTRRIYVQAERGIAML 252

Query: 247 LPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            P   P     +++   +L   +   F + +   T +   R 
Sbjct: 253 HPHSRPCVGAALTLYSEILDRIEEIDFAVFAQRATVSTARRL 294


>gi|316934009|ref|YP_004108991.1| Squalene/phytoene synthase [Rhodopseudomonas palustris DX-1]
 gi|315601723|gb|ADU44258.1| Squalene/phytoene synthase [Rhodopseudomonas palustris DX-1]
          Length = 290

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 6/282 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
           + F    +R+ D+DRY A L      R  L  L  F+ E++RVR     P+  ++RLQWW
Sbjct: 10  AAFCAGLVREADFDRYAATLFVATEKRRPLLALAAFNAEIVRVRGQVSQPLPGEIRLQWW 69

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
            D+             +P +VEL   +  + LP +    +IEAH FD YND + D    E
Sbjct: 70  TDLLSD--AAHGGAEGNPVAVELTRTIADHALPAEPLTRLIEAHIFDLYNDPMPDWTVLE 127

Query: 141 HYAFRISSRLIHLATMILDS---ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
            +       L+ L   +L     +   A   V ++AGIA  IG+++ +LP    R QLY 
Sbjct: 128 PHLAETEGALLALGARVLGQGAGQAPDAIEHVARHAGIAIGIGRIVARLPYDSARRQLYL 187

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P D+L   G D E    GQ++  +  A+        K+L +A  E+  +   + PAF+P+
Sbjct: 188 PNDVLLRHGCDLEQVFGGQSTPALRAALAEVIAEARKHLDQALLELADLPTALRPAFLPL 247

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++    L    +      +     ++L   W +  +S  K F
Sbjct: 248 ALARRDLDLLASPERDPFT-PFERSRLATLWTLWRASRSKAF 288


>gi|218510623|ref|ZP_03508501.1| phytoene synthase protein [Rhizobium etli Brasil 5]
          Length = 383

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 111/274 (40%), Positives = 161/274 (58%), Gaps = 3/274 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           E+  + +    L  LRD D DRYLACLLSP   R +L+ LY F+ EL R+RD    P+  
Sbjct: 3   EENIATNQDICLAMLRDSDRDRYLACLLSPQDRRGALAALYAFNAELARIRDLVHEPLPG 62

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           ++R+Q+W+D+ E S     + + +P +  LL+ +  + LP +  +DMIEA  FD Y+D +
Sbjct: 63  EVRMQYWRDLLEGSAH--GSTAANPVAAALLTAIETHRLPRKTLVDMIEARTFDLYDDPM 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                 E YA   +S LI LA+++L  +  + S     +AG+AQ I  L+  +P+H  RG
Sbjct: 121 ETRLSLEGYAGETASALIQLASLVLSPQDAARSADAAGHAGVAQAIAGLLLLMPLHRRRG 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           QLY PL IL A GLDR+SFL+G++  RI+ A++ FA LG ++L KAR     I P VFPA
Sbjct: 181 QLYIPLQILSATGLDRDSFLAGKDRPRIAAAVEAFAGLGREHLAKAR-GAGPIAPAVFPA 239

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
           F+P ++ E VL  AQ  G ++      P Q  R 
Sbjct: 240 FLPATLAEPVLLKAQRRGAQLFDRPLQPPQWRRQ 273


>gi|289549558|ref|YP_003470462.1| Dehydrosqualene synthase [Staphylococcus lugdunensis HKU09-01]
 gi|289179090|gb|ADC86335.1| Dehydrosqualene synthase [Staphylococcus lugdunensis HKU09-01]
          Length = 287

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 89/275 (32%), Gaps = 9/275 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                  +  + ++        A    P   R ++  +Y     +    D   +P     
Sbjct: 2   TLDDHFQYCHQLMKHHSKSFSYAFDYLPDRERRAVWAIYAVCRVIDDSIDVHHDPQY--- 58

Query: 76  RLQWWKDIFESSTKGLIAE---SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            LQ+ +    +  +  +     S +       ++   + +    F  +I+    D Y + 
Sbjct: 59  -LQYIRQDIMAIEQQQLHPEFQSDARIMHAFSNVAHTFKMEYPAFYKLIDTVRKDQYFEQ 117

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               +    Y + ++  +  + T IL  +  + + RV +  G A  +  ++  +   + +
Sbjct: 118 FDTDEAMLDYCYGVAGTVGEVLTPILAQQPTTETFRVARKLGEALQLTNILRDVGEDFEQ 177

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G++Y   + L    +D +       +       +  A +  +    A   +        P
Sbjct: 178 GRIYISKERLAHFNIDIKQQYQQGVTSNYIKMWEALAYIAEQAYHDALSNIHVFNKQAQP 237

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
              +   I  S+L   +  G+  +      +++ +
Sbjct: 238 IIELAAVIYASILDEVRKAGY-TLHQRVYVSKVDK 271


>gi|320107065|ref|YP_004182655.1| squalene synthase HpnC [Terriglobus saanensis SP1PR4]
 gi|319925586|gb|ADV82661.1| squalene synthase HpnC [Terriglobus saanensis SP1PR4]
          Length = 319

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 31/288 (10%), Positives = 84/288 (29%), Gaps = 5/288 (1%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
                     +          + ++A    P   R     +Y +      + D   +P+ 
Sbjct: 22  TAPTLEEARAWCKSLAESHYENFHVATWFLPARLRTHFYPIYAYCRVSDDLSDEVGDPLL 81

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L  W+ +              P  + L   +R  D+P + F  ++ +   D     
Sbjct: 82  ALRLLNEWEKMLLEVYDS-PTSVKHPVLIALAETIRSCDIPREPFTHLLVSFRKDQTFSR 140

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-H 191
               ++   Y+   +S + HL               +            +   +      
Sbjct: 141 YQTMEELASYSDSSASPVGHLILYSSGYRDPELFA-LSDKICTGLQFANMWQDVGPDLTE 199

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG++Y P D +    +  +   +G+ +      ++           + +     +  D+ 
Sbjct: 200 RGRIYLPEDEMKRFNVTPQQLQAGEFTPAYRELLRYLVGKTRVLFAEGQPIEDRVDADLA 259

Query: 252 PAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            A  +     E++L   +   F  ++H     +  +   ++  ++  +
Sbjct: 260 SALRLFRRGGEAILDAIEAIDFNTLNHRPIVTKATKM-RLVGGALTGK 306


>gi|306840387|ref|ZP_07473152.1| Phytoene synthase [Brucella sp. BO2]
 gi|306289625|gb|EFM60829.1| Phytoene synthase [Brucella sp. BO2]
          Length = 266

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 2/268 (0%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           +R+ D DRYL+ L +P   R +L+ LY F+ E+ R+RD    P+  ++RLQWW+D+    
Sbjct: 1   MREADRDRYLSVLYAPQEKRGALAALYAFNAEIARIRDLVHEPLPGEVRLQWWRDLINGE 60

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
            +   +    P +  L+  + +Y+LP   F +  EA  FD Y+D +      E Y    +
Sbjct: 61  AR--GSAEAHPVAAALIETIEKYELPRIAFDNYCEARVFDLYDDPMPSRNDLEGYCGETA 118

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           S LI LA  ILD +   A      +AG+AQ +  L+  LPIH  RGQ+Y P D+L A+G+
Sbjct: 119 SALIQLAGFILDRDAAQAHAETAGHAGVAQAVAGLLRLLPIHRRRGQVYVPADMLKAIGV 178

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
            R+  LS ++      A+ I   L  ++L    +    +   + PAF+P+++  + L   
Sbjct: 179 TRDMLLSSEDKSATERAVTIMLALAREHLAIFDKAKAGLPQTLHPAFLPMALVPAYLNAV 238

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +  G +        + + + W M  ++ 
Sbjct: 239 ERLGAQAAQKVADISAIRKQWLMFRANF 266


>gi|206603783|gb|EDZ40263.1| Putative phytoene synthase [Leptospirillum sp. Group II '5-way CG']
          Length = 320

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 99/295 (33%), Gaps = 8/295 (2%)

Query: 4   KFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           + + ++   +  +   D      + +R+      ++     P  R  L+  Y F   +  
Sbjct: 12  RIIRQSLPSDSPVLDLDGFEKARKGIRES--TFSVSFFFLDPAARKDLATFYLFCRVVDD 69

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + D   +    + RL  W++ F    + L      P   +L  +V +  +P   F D+++
Sbjct: 70  IVDETPDKSLAEERLLLWREFFSG--ETLPETFPHPLGQDLRDLVHRRRIPLSLFRDILD 127

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQL 182
               D     I D +    Y +  +  +      I   E            G A  +  +
Sbjct: 128 GMETDLRPVRIPDIEALRRYCYLAAGAVGRACIPIFGGEIGE-LGSYADSLGEAFQLTNI 186

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           +  L     R ++Y P D + A G+  +  L G+        ++       +   +A   
Sbjct: 187 LRDLKSDARRNRIYLPADRMQAYGVSDKDVLEGRLHPGFQRLLEEIWMRAEEDYRRAFAL 246

Query: 243 MRYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +        +  A +       + +  +  GF +  H    + L++ W +L   +
Sbjct: 247 LSDRKKWKTMKAARVMEIFYREIHRKIRQSGFDVYRHRIRLSSLLKGWLLLRFWM 301


>gi|328790568|ref|XP_001122126.2| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial-like
           [Apis mellifera]
          Length = 275

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 3/266 (1%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKG 90
            DY+ YL  LL     + +   +  F+ E+ +++D   +    +MRL++W D    + KG
Sbjct: 12  HDYENYLCTLLLSHKNKAAAFVIRAFNVEIAQIKDQVHDYKIGEMRLKFWIDALNDTYKG 71

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
                 SP  + L +I+++Y L   YF  +I+       + S  D    E Y    SS +
Sbjct: 72  NP--PRSPVMLALHTILQKYSLSKHYFKRLIDIRLEKLKDYSFNDMSAIEKYTEYSSSSI 129

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
            +L           A      + G A  I  LI  +P +  +     P DIL    +  E
Sbjct: 130 YYLLLQAHGVTNIDA-DHAASHMGKAHGIVNLIRSIPYNASKRVNMLPQDILMKHNVSTE 188

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNH 270
           + L GQ+S  +   I   A  G  +L         +  +    F+P+   +  L   +  
Sbjct: 189 AVLQGQSSKDLQNVIYDVASYGKLHLDATISLKCKMEKEAHLIFLPIICLQKYLNELRRA 248

Query: 271 GFKIVSHSHTPNQLVRPWYMLSSSIK 296
            F I          + P Y+   S  
Sbjct: 249 DFNIFDARLQKKNHLLPLYLYWKSYT 274


>gi|294816064|ref|ZP_06774707.1| Putative squalene/phytoene synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326444406|ref|ZP_08219140.1| probable phytoene synthase [Streptomyces clavuligerus ATCC 27064]
 gi|294328663|gb|EFG10306.1| Putative squalene/phytoene synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 317

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 83/297 (27%), Gaps = 7/297 (2%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           +    ++T            +          +      L P   R ++S LY     +  
Sbjct: 1   MSRTVEHTTHPPAPVQAAYSYCEAVTGAQARNFAYGIRLLPTDKRQAMSALYALSRRVDD 60

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMI 121
           + D    P  +  RLQ  +++      G +A+    P +V L    R++ +P     ++I
Sbjct: 61  IGDGTLAPAAKRERLQATRELLARVRAGAVADDDTDPVAVALADTARRFPVPLDALDELI 120

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQ 177
           +    D    +         Y   ++  +  L+  +  ++        +       G+A 
Sbjct: 121 DGVLMDVRGATYETWDDLRAYCRCVAGAIGRLSLGVFGTQSGAPGAERAPEYADTLGLAL 180

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYL 236
            +  ++  L      G+ Y P D L   G                +  +           
Sbjct: 181 QLTNILRDLREDAANGRTYLPADDLAKFGCSAGFHTPVPPAGSDFAGLVHYEVRRARALF 240

Query: 237 FKAREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            +    +  +             I   +L   +     ++    +     + +  + 
Sbjct: 241 AEGYRLLPLLDRRSGACVAAMAGIYRRLLDRIERDPGAVLRGRVSLPGREKAYVAVR 297


>gi|148268994|ref|YP_001247937.1| squalene/phytoene synthase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150395073|ref|YP_001317748.1| squalene/phytoene synthase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|295405256|ref|ZP_06815069.1| dehydrosqualene synthase [Staphylococcus aureus A8819]
 gi|147742063|gb|ABQ50361.1| Squalene/phytoene synthase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947525|gb|ABR53461.1| Squalene/phytoene synthase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|294970201|gb|EFG46219.1| dehydrosqualene synthase [Staphylococcus aureus A8819]
          Length = 287

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 29/278 (10%), Positives = 92/278 (33%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  +V+  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVVQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFDNE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RVYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|302334182|gb|ADL24375.1| squalene/phytoene synthase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 287

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 29/274 (10%), Positives = 89/274 (32%), Gaps = 2/274 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPKNQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +   +  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQIIEKHPLEHHHFQSDRRIMLALQYVAQHNQIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +       
Sbjct: 121 ETDTELLGYCYGVAGTVGEVLTPILSDYTTQQTYDVARRLGESLQLINILRDVGEDLENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D          +R     + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLNQYEVDIAEVYHKGIDERYIALWEYYAAIAEKDFQDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
             +   I   +L   +   +  +      ++  +
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKKKK 273


>gi|55378779|ref|YP_136629.1| phytoene synthase [Haloarcula marismortui ATCC 43049]
 gi|55231504|gb|AAV46923.1| phytoene synthase [Haloarcula marismortui ATCC 43049]
          Length = 323

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 81/265 (30%), Gaps = 3/265 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           S +        ++     +LA  L P   R     +Y F      V D    P       
Sbjct: 3   SDNIQTSKSIQQETGRTFHLATRLLPERIRHPTYVMYAFFRVADEVVDQTDGPPPTVQHE 62

Query: 78  QWWKDIFESSTKGLIAESISP-FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           Q       +       E+           +  ++D+  +     I+A   D         
Sbjct: 63  QLEVIREAALGNIDPEETDHEAVMAAFQDLADRHDISEETINVFIDAMEMDIAQARYETF 122

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQL 195
           +    Y    +  + H+ T ++D  +   +L        A  +   +  +    H  G++
Sbjct: 123 EDLREYMGGSAVAVGHMMTEVMDPPQKEEALPHATALAEAFQLSNFLRDVREDIHDYGRV 182

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAF 254
           Y P + L   G+  E     +  D     ++       +   +    +RY+  D  F   
Sbjct: 183 YLPQETLERHGVTEEQLADAEVDDAFRAVMQEELARTDELYREGVAGIRYLPEDCQFGVL 242

Query: 255 IPVSITESVLKHAQNHGFKIVSHSH 279
           +   +     +  ++ G+ +++ + 
Sbjct: 243 LAAVLYADHHRLIRDRGYDVLTETP 267


>gi|257051231|ref|YP_003129064.1| Squalene/phytoene synthase [Halorhabdus utahensis DSM 12940]
 gi|256689994|gb|ACV10331.1| Squalene/phytoene synthase [Halorhabdus utahensis DSM 12940]
          Length = 324

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 93/291 (31%), Gaps = 8/291 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--TARNPITR 73
           +  R         R      Y+A  L P   R +   LY F      V D     +  T+
Sbjct: 1   MIGRSVKTSKAIHRRTGKTFYIATRLLPERVREATYALYAFFRIADDVVDRPDPPDAETQ 60

Query: 74  DMRLQWWKDIF--ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
              L+  +     E   +G+++E+         S+  + D+        I+A   D  + 
Sbjct: 61  RRHLEAIRAAANGEQIQRGVLSETDREVLETFRSLAEEADIDPAEIDVFIDAMAQDIDHS 120

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                ++   Y    ++ + ++   ++D      +    +    A  +   +  +     
Sbjct: 121 GYETYEELRGYMRGSAAAVGNMMLSVMDPPESDRATPHARSLAEAFQLTNFVRDVREDIS 180

Query: 192 RG-QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
              ++Y P + L    +       G  +D ++  I+                +RY+  D 
Sbjct: 181 EYDRVYLPDETLDRHDVTETQLRRGDMTDDVAAVIRTELHRTESLYRHGVAGIRYLPEDC 240

Query: 251 -FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS--IKKR 298
            F   +   +     +  ++  + +++   + +   R W +  +    ++ 
Sbjct: 241 QFAVLLAAVLYADHHRQIRHLEYDVLNGDASLSMTRRLWLLARTWYHWRRT 291


>gi|218296789|ref|ZP_03497495.1| Squalene/phytoene synthase [Thermus aquaticus Y51MC23]
 gi|218242878|gb|EED09412.1| Squalene/phytoene synthase [Thermus aquaticus Y51MC23]
          Length = 275

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 85/270 (31%), Gaps = 8/270 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
              D   + R +R      YL   L PP  R     +Y          D        +  
Sbjct: 1   MEPDWNALSRVIRAHSATFYLGSRLFPPEARKGAWAVYAACRLGDEAVDGEGG---GEEA 57

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+ W +  E +           +   L   + ++ +P + F  M E    D     +   
Sbjct: 58  LKAWWEGVERAYA---GRPRENWERGLTWALERWPIPFEAFAHMKEGFLTDLGPVRLKTE 114

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++   Y +R++  +  +   I      + +  +    G A  +  ++  +     R +LY
Sbjct: 115 EELFTYCYRVAGTVGRMMAPIAGGALEAEAKAI--RLGQAMQLTNILRDVGEDLARDRLY 172

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PLD+L A G+  E    G+ +      +            +  E +R++        + 
Sbjct: 173 LPLDLLEAYGVKLEDLQEGRITPGYRTLMAYLEAKARALYREGLEGLRHLQVGRAAIALA 232

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
               + +L   +  G+  +          R
Sbjct: 233 ALQYQGILDKLRLQGYDNLRRRAHLKPWER 262


>gi|319404538|emb|CBI78142.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 286

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 3/284 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +    + L  LR+ D DRY++ L +P   R +L+ LY F+ E+ R+R++ R+P+  ++R
Sbjct: 1   MANFLPYCLDILRNTDRDRYISVLFAPKQKRRALAALYAFNAEIARIRESVRDPLMGEIR 60

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+WW+D   +  +       +P   +LL  +  + L    FL   +A  FD YN+ I   
Sbjct: 61  LRWWRDSIANDEQQNS--ESNPILNDLLKTITLFKLSKITFLHYCDARIFDLYNNPIATI 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y  + +S ++ L+  ILD +         KY GIAQ +  ++  LP+   R Q Y
Sbjct: 119 HDLEAYCSKTASTILQLSCQILDFDVAPNFTDAYKYGGIAQALSGILRLLPLMQLRYQCY 178

Query: 197 FPLDILGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           FP D+L A+G+ RE   S   N  +    I+    L   Y  K  +    +   + PAF+
Sbjct: 179 FPTDMLEALGISREELNSNCINDKQKQQIIEAMVALSRDYYLKFYDYSVTLPKTLKPAFL 238

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           P+++T + L+     G K+   + T   L R W +  ++I   F
Sbjct: 239 PLAVTPASLQKTVQLGAKVFQENTTSLLLYRYWLITKAAISGHF 282


>gi|15790625|ref|NP_280449.1| CrtB2 [Halobacterium sp. NRC-1]
 gi|169236364|ref|YP_001689564.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
           synthase) [Halobacterium salinarum R1]
 gi|10581149|gb|AAG19929.1| phytoene synthase [Halobacterium sp. NRC-1]
 gi|167727430|emb|CAP14218.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
           synthase) [Halobacterium salinarum R1]
          Length = 322

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 29/273 (10%), Positives = 79/273 (28%), Gaps = 4/273 (1%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR--DMRLQWWKD 82
               R      +LA  L P   R +   LY F      V DT  +         L+  + 
Sbjct: 11  KAIQRRTGKTFHLATRLLPTRVRHATYVLYAFFRVADDVVDTTADRDPGVQREELEGIRA 70

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               +       + +        +  ++ + ++     I+A   D          + E Y
Sbjct: 71  AALGARDPESVAADTEVLAAFRELATRHGISDEDIHTFIDAMQADLEKTRYESHAELEEY 130

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG-QLYFPLDI 201
               +  + ++   +++      +         A  +   +  +    H   ++Y P + 
Sbjct: 131 MRGSAVAVGYMMMDVMEVAEPETAAPHAAALAEAFQLSNFLRDVAEDVHEYDRVYLPAES 190

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
               G+  E   +         A++       +        + Y+  D  F   +   + 
Sbjct: 191 RADHGVTVEQLRARTVDAGFREAMREELAYTERKYRTGVAGIEYLPEDCQFAVLVSAVLY 250

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               +  +     +++ + + +   + W +  +
Sbjct: 251 ADHHRAIRERDCDVLTATPSLSTPRKLWLVAKT 283


>gi|284031783|ref|YP_003381714.1| phytoene synthase [Kribbella flavida DSM 17836]
 gi|283811076|gb|ADB32915.1| Phytoene synthase [Kribbella flavida DSM 17836]
          Length = 317

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 91/292 (31%), Gaps = 7/292 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           +E           +   +     +LA  +  P  R ++  LY F      V D      T
Sbjct: 11  KEPRLREAYARCRQLNAEHGKTYFLATRMLAPAQRPAVHALYGFARFADDVVDVPPAGAT 70

Query: 73  RDMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                   + + ++   G     S  P    ++    ++ +    F D + +   D   +
Sbjct: 71  PADVAASLEQVAQALGHGLDDGRSQDPIIAAVVDCAGRFGIGRDLFDDFLTSMRMDLTVE 130

Query: 132 SIFDCKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                     Y    +  +      ++      + +       G+A  +   +  +   Y
Sbjct: 131 RYPTRADLYRYTRGSAEVIGLQVLPVLGTVTSRAEAAPAAAALGLAFQLTNFLRDVAEDY 190

Query: 191 HRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y PLD L A G+D E       + +   R++ A++           +AR  +  +
Sbjct: 191 ERGRVYLPLDELAAHGVDDELIGWCVANRRTEPRMTEALRAQIAATRAVYAQARPGIAML 250

Query: 247 LPDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            P   P       +   +L   +  G  + S     +   +     ++  K 
Sbjct: 251 SPISRPCVRTAYVLYSEILDRIEAAGHDVFSRRAHVHGFRKATVAGAALAKG 302


>gi|297155998|gb|ADI05710.1| probable phytoene synthase [Streptomyces bingchenggensis BCW-1]
          Length = 306

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 32/287 (11%), Positives = 80/287 (27%), Gaps = 11/287 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +          +      L P   R ++S LY F   +  + D   +   +  R
Sbjct: 1   MLAAYRYCEAVTGQQARNFAYGIRLLPTEKRRAMSALYAFSRRVDDIGDGRLDADAKRAR 60

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L   + + +      I E    P +V L    R++ +P     ++I+    D    +   
Sbjct: 61  LADTRAVLDRIRDRGIEEDDTDPVAVALAHAARRFPIPLGGLDELIDGVLMDVSGQTYET 120

Query: 136 CKQFEHYAFRISSRLIHLATMI--------LDSERYSASLRVIKYAGIAQFIGQLICQLP 187
                 Y   ++  +  L+  +        + +     +       G+A  +  ++  + 
Sbjct: 121 WDDLRAYCRCVAGAIGRLSLGVFGTVRAPGMSAREIERAPEYADTLGLALQLTNILRDIR 180

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                G+ Y P D L   G       S        +  ++           +  + +  +
Sbjct: 181 EDASGGRTYLPADDLAKFGCPTGIHASIAPPDADFTGLVQFEVRRARALFAEGYKLLPML 240

Query: 247 LPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                        I   +L+        ++    +     + +  + 
Sbjct: 241 DRRSGACVAAMAGIYRRLLERIARDPEAVLRGRVSLPGREKVYVAVR 287


>gi|318058276|ref|ZP_07976999.1| probable phytoene synthase [Streptomyces sp. SA3_actG]
 gi|318076938|ref|ZP_07984270.1| probable phytoene synthase [Streptomyces sp. SA3_actF]
          Length = 312

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 81/283 (28%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S    +          +      L P   R ++S +Y F   +  + D    P  +  R
Sbjct: 11  VSAAYGYCETVTGAEAKNFAYGIRLLPGDKRRAMSAVYAFSRRVDDIGDGTLAPEEKTRR 70

Query: 77  LQWWKDIFES-STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L   +++ E   TK +  +   P +V L    R++ +P     ++I+    D    +   
Sbjct: 71  LNECRELLERVRTKDVAEDDTDPVAVALADTARRFPVPLGALDELIDGVLMDVQGRAYRT 130

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRV----IKYAGIAQFIGQLICQLPIHYH 191
             +   Y   ++  +  L+  I      +             G+A  +  ++  +     
Sbjct: 131 WDELADYCRCVAGAIGRLSLGIFGVRPGARDRVHAPEYANTLGLALQLTNILRDVREDAA 190

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P + L   G        +          +            +  + +  +    
Sbjct: 191 NGRTYLPAEDLDKFGCSAGFGSATLPEGADFPGLVHFEVRRARALFDEGYQLLPMLDRRG 250

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 251 GACVSAMAGIYHRLLDRIEQDPDAVLRGRVSLPAHEKAYVAVR 293


>gi|302555530|ref|ZP_07307872.1| squalene synthase HpnD [Streptomyces viridochromogenes DSM 40736]
 gi|302473148|gb|EFL36241.1| squalene synthase HpnD [Streptomyces viridochromogenes DSM 40736]
          Length = 316

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 79/281 (28%), Gaps = 7/281 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +          +      L P   R ++S LY F   +  + D A     +  RL+
Sbjct: 17  AAYSYCEAVTGRQARNFAYGIRLLPAPQRRAMSALYAFSRRVDDIGDGALAGDVKVARLE 76

Query: 79  WWKDIF-ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             + +        +  +   P +V L    R + +P     ++I+    D   ++     
Sbjct: 77  ETRALLTRIREDEIDEDDTDPVAVALTHAARHFPIPLGGLDELIDGVLMDVRGETYETWD 136

Query: 138 QFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
             + Y   ++  +  L+  +  +E        +       G+A  +  ++  +      G
Sbjct: 137 DLKVYCRCVAGAIGRLSLGVFGTEPGARGVDRAPEYADTLGLALQLTNILRDVREDAVGG 196

Query: 194 QLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           + Y P D L   G     S          +  +            +    +  +      
Sbjct: 197 RTYLPADDLAKFGCSAGFSGPRPPEGSDFAGLVHFEVRRARALFAEGYRLLPMLDRRSGA 256

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                  I   +L   +     ++    +     + +  + 
Sbjct: 257 CVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGREKAYVAVR 297


>gi|29827565|ref|NP_822199.1| phytoene synthase [Streptomyces avermitilis MA-4680]
 gi|15823922|dbj|BAB69145.1| phytoene synthase [Streptomyces avermitilis]
 gi|29604665|dbj|BAC68734.1| phytoene synthase [Streptomyces avermitilis MA-4680]
          Length = 342

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 91/270 (33%), Gaps = 11/270 (4%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN--- 69
            +    +      R         +LA  L P   R ++  LY F      + D+      
Sbjct: 12  TDPSLRKAYTHCRRLNARHGKTYFLATRLLPVERRPAVHALYGFARWADDIVDSLDTTVG 71

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           P  R   L   ++   +  +     S  P  + L    R+Y + +Q+F D + A   D  
Sbjct: 72  PAVRSAALGRLQESLRTGLRE--GHSTEPVVLALAETARRYAIDHQHFSDFMTAMRSDLE 129

Query: 130 NDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                       Y    ++ +   +  ++        +       G+A  +   +  +  
Sbjct: 130 VTGYETYADLRGYMHGSAAVIGLQMLPVLGTVVPREEAAPHAAALGVAFQLTNFLRDVGE 189

Query: 189 HYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P D+L A G+DR+       +G+   RI+ A+K    L      +A   + 
Sbjct: 190 DLDRGRVYLPADLLRAHGVDRDLLRWSRDTGRRDRRITRALKAVEGLTRGVYREAAPGLA 249

Query: 245 YILPDVFPAFIPV-SITESVLKHAQNHGFK 273
            + P   P       +   +L    + G+ 
Sbjct: 250 MLDPVARPCIRTAFVLYGGILDAIADDGYA 279


>gi|258512778|ref|YP_003186212.1| Phytoene synthase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479504|gb|ACV59823.1| Phytoene synthase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 335

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 101/303 (33%), Gaps = 21/303 (6%)

Query: 2   VLKFLTKNTRKEEKIFSR----------DSLFVLRNLRDIDYDRYLACLLSPPLYRISLS 51
           VL+F+ +  R+     S           D   V   +R       LA    P   R ++ 
Sbjct: 5   VLRFVVEEGRRAAHELSASPASRWTRLGDLPRVGHIIRQHSKTFSLAARCLPRRSRKAVE 64

Query: 52  FLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD 111
             Y F        D          RL+ +              +  P     L+I     
Sbjct: 65  AFYAFCRSADDFADHLGE--EGKRRLEAYLAAIRGGA-----PAPDPILASWLAIGDGMR 117

Query: 112 LPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY---SASLR 168
           +P ++   ++E    D+    +   +    YA+ ++S +  + T+I+   R         
Sbjct: 118 IPRRWSESLVETLLADTQRSVVPTLEDLLGYAYGVASTVGLITTVIVGYRRTSSLEDVFA 177

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                GIA  +  ++  +     RG++Y P++ L   G+  +    G+  +     ++ +
Sbjct: 178 RAIALGIAMQLTNILRDVAEDLSRGRIYLPVEDLQRFGVTADHLACGRLHEGWQQLLQHY 237

Query: 229 AELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
             L  +    A   +R++ P    P  +      ++L+  + HG  + +       L + 
Sbjct: 238 IALARQLYEYAIPGIRHLAPAARVPVALAAVWYRAILRDIERHGGDVFTRRAHVPLLRKL 297

Query: 288 WYM 290
              
Sbjct: 298 RIA 300


>gi|205363971|gb|ACI04499.1| CrtB [uncultured bacterium]
          Length = 309

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 89/285 (31%), Gaps = 10/285 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +        ++        LA  L  P  R + + +Y F        D A +    ++ +
Sbjct: 3   TAALTVCRASIAQHSKSFSLASRLLGPRERDAAAAVYAFCRRADDAVDIASDRSPVEI-V 61

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              +   ++   G +     P  V    +VR + +P  Y  +++     D  + +  D  
Sbjct: 62  ATLRAELDAIYAGEVQ--SDPALVAFQEVVRAHHIPKDYPAELLAGMAMDVEDTTYDDLD 119

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y FR++  +  + + +L      A+L    + G+A  +  +   +   + RG+LY 
Sbjct: 120 ALLVYCFRVAGTVGLMMSHVLGVRE-EAALHNAAHLGMAMQLTNICRDVGEDWGRGRLYL 178

Query: 198 PLDILGAVGLD-----RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           P   L   G           L       I+  I+   E            +  +      
Sbjct: 179 PSADLDRAGAPGLRGRLGGPLPDAARPPIARVIRALLERAELLYESGERGVPLLPFRAAV 238

Query: 253 AFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           A     +    + +     G   V+     +   +    L +  +
Sbjct: 239 AVRTARLVYGDIGRVILEQGADPVAPRAVVSTSRKLRLALLAFAR 283


>gi|254381306|ref|ZP_04996671.1| phytoene synthase [Streptomyces sp. Mg1]
 gi|194340216|gb|EDX21182.1| phytoene synthase [Streptomyces sp. Mg1]
          Length = 324

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 89/277 (32%), Gaps = 7/277 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E           R         +LA  L P   R ++  LY F      + D    P+ 
Sbjct: 15  TEPHLRTAFEHCRRLSARHGKTYFLATRLLPAARRPAVHALYAFARLADDIVDDLTTPVE 74

Query: 73  RDMRLQWWKD-IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
              R    +D   +  T      +  P    +     +Y +P+ +F D + +   D    
Sbjct: 75  PRNRALRLQDLSRDLRTAMNGGLAHHPVVTAVAHTAYRYRIPHHHFDDFLASMRSDLTVT 134

Query: 132 SIFDCKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                     Y    ++ +      ++        +       G A  +   I  +    
Sbjct: 135 DYDTLDALRGYMHGSAAVIGLQVLPVLGHITTREEAAPHAAALGEAFQLTNFIRDVGEDL 194

Query: 191 HRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            R ++Y P D+L A G+DRE  L    +G+   RI+ A++  A L  ++  +AR  +  +
Sbjct: 195 DRDRVYLPADLLAAEGVDRELLLWSRGTGRPDPRITRALRSAAALTRRFYVQARPGLDML 254

Query: 247 LPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPN 282
            P   P       +   +L      G+  V       
Sbjct: 255 EPVSRPCVRTAFVLYGDILDAVARDGYASVHRRSAVP 291


>gi|206573498|gb|ACI14293.1| phytoene synthase [Linum usitatissimum]
          Length = 229

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 77/231 (33%), Gaps = 9/231 (3%)

Query: 49  SLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR 108
           ++  +Y +      + D           L  W+       +         F   L   V 
Sbjct: 1   AIWAIYVWCRRTDELVDGPNATHITPKALDRWETRLNDLFQ---GRPYDMFDAALSDTVS 57

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER-----Y 163
            Y +  Q F DM+E    D       +  +   Y + ++  +  ++  ++  +       
Sbjct: 58  NYPVDIQPFKDMVEGMRMDLKKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIDHGSKTST 117

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
            +        GIA  +  ++  +     RG++Y P D L   GL       G+ +D+   
Sbjct: 118 ESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELRKAGLSDNDIFKGKVTDKWRH 177

Query: 224 AIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFK 273
            +K   +    +  +A + +  +      P +  + + + +L   + + + 
Sbjct: 178 FMKGQIKRARMFFDEAEKGVGELNRASRWPVWASLILYKQILDAIEANDYN 228


>gi|284165967|ref|YP_003404246.1| Phytoene synthase [Haloterrigena turkmenica DSM 5511]
 gi|284015622|gb|ADB61573.1| Phytoene synthase [Haloterrigena turkmenica DSM 5511]
          Length = 316

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 5/269 (1%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           +      YLA    P   R +   LY F      V D A        R +      ++  
Sbjct: 14  QRTGKTFYLATKFLPERVRHATHVLYGFFRIADEVVDDAEGVPPDRQRAELESLRAQALG 73

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +        P       + R+YD+        ++A   D   D        E Y    ++
Sbjct: 74  ETEPEG---PVLEAFEELRREYDIAGGEINSFVDAMQSDIETDRYETYDDLESYMRGSAA 130

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDILGAVGL 207
            +  + T I+D +  +A+L      G A  +   +  +      R ++Y P + L + G+
Sbjct: 131 AVGVMMTAIMDPDERAAALPHAVKLGEAFQMTNFLRDVREDVVERDRIYLPQETLRSHGV 190

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKH 266
                   + SD    A+    +   +   +    +RY+  D   P  +   +       
Sbjct: 191 SDAQIERLEYSDSFEAAMAAELKRTEELYREGVAGIRYLPEDCQLPVLLAAVLYAEHHTV 250

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +   + ++S   + +   +   +  +  
Sbjct: 251 IRAQEYDVLSREPSLSTTRKLRCLAKTRW 279


>gi|254385934|ref|ZP_05001252.1| squalene/phytoene synthase [Streptomyces sp. Mg1]
 gi|194344797|gb|EDX25763.1| squalene/phytoene synthase [Streptomyces sp. Mg1]
          Length = 311

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 31/287 (10%), Positives = 80/287 (27%), Gaps = 11/287 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S    +          +      L P   R ++S LY F   +  + D    P  +  R
Sbjct: 6   ISAAYSYCEAVTGAQARNFAYGIRLLPTDKRHAMSALYAFSRRVDDIGDGTLAPEAKLTR 65

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L+  + +        + E    P +V L    R++ +P +   ++I+    D   ++   
Sbjct: 66  LEETRALLGRIRAEDVDEDDTDPVAVALAHAARRFPIPLEGLDELIDGVLMDVRGETYET 125

Query: 136 CKQFEHYAFRISSRLIHLATMIL--------DSERYSASLRVIKYAGIAQFIGQLICQLP 187
               + Y   ++  +  L+  +              + +       G+A  +  ++  + 
Sbjct: 126 WDDLKEYCRCVAGAIGRLSLGVFGTVNSGSLAPADAARADEYADTLGLALQLTNILRDVR 185

Query: 188 IHYHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                G+ Y P + L   G                +  +            +    +  +
Sbjct: 186 EDAANGRTYLPAEDLAKFGCSEGFHSDRAPAGADFAGLVHHEVRRARALFVEGYRLLPML 245

Query: 247 LPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                        I   +L   +     ++    +     + +  + 
Sbjct: 246 DRRSGACVAAMAGIYRRLLDRIEREPEAVLRGRVSLPTHEKAYVAVR 292


>gi|326430688|gb|EGD76258.1| hypothetical protein PTSG_00961 [Salpingoeca sp. ATCC 50818]
          Length = 300

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 112/303 (36%), Gaps = 8/303 (2%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           MVL+ +     +               +R    + YL  +L P     ++  +  F+ ++
Sbjct: 1   MVLRTVNMAGTRAATNV---FAHCRNVVRQSSREHYLTTMLLPRTAENAVFAVRAFNAQI 57

Query: 61  MRVRDTARNPITRDMRLQWWKDIFE----SSTKGLIAESISPFSVELLSIVRQYDLPNQY 116
            RVRD AR P    MR  +W D+       +T    A    P +  L     Q++L   +
Sbjct: 58  SRVRDEAREPGAVKMRFLFWNDVVNGLKGQTTNPTSALVAHPVAKALDITATQHNLTVSF 117

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIA 176
              ++ A    S +      K  E+YA    S L +L    +      A   V  + G A
Sbjct: 118 LKQLVRAREAHSDDSPFQTMKDAENYAEHTCSSLYYLTLECMGIRDQHA-DHVASHIGRA 176

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
           + +  L+  LP    +G+L  PLD+    G+ ++  L G  +  +  A+   A   + +L
Sbjct: 177 EGLVTLLRGLPHMASQGKLRLPLDVCAKHGVVQQDVLRGNITPAVQDAVHAIASEAVLHL 236

Query: 237 FKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             AR  M  I       F+P       L       F  +  +    Q + P  +L +  +
Sbjct: 237 NTARSMMDQIPQHARTCFLPSVCLNLYLNQLLAVDFDPMHPTLLKPQGLLPLRLLWARFR 296

Query: 297 KRF 299
             +
Sbjct: 297 NSY 299


>gi|170741894|ref|YP_001770549.1| squalene/phytoene synthase [Methylobacterium sp. 4-46]
 gi|168196168|gb|ACA18115.1| Squalene/phytoene synthase [Methylobacterium sp. 4-46]
          Length = 351

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 84/278 (30%), Gaps = 8/278 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D       +R      Y A  L P   R     LY F        D  R       RL 
Sbjct: 14  ADHAACRAAIRGGSRSFYAASWLLPRAVRRDAYGLYAFCRLSDDAVDGPRARADAVERL- 72

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
                   +          P    L  ++ ++ +P      +++   +D+      D   
Sbjct: 73  ----RLRLAAACAGRPFDDPADRALAEVLDRHGIPPALPAALLDGLAWDAAGRRYRDLSD 128

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              YA R++  +  + T+++      A  R     GIA     +   +      G+LY P
Sbjct: 129 LVAYASRVAGAVGAMMTLVMGERSPEALARACD-LGIAMQFTNIARDVGEDARAGRLYLP 187

Query: 199 LDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
              L   GLD ++FL     S  ++  +            ++   +  +     PA    
Sbjct: 188 EAWLREAGLDPDAFLARPAPSPALAAVLTRLLRAADLLYARSEAGIALLPAPCRPAVRAA 247

Query: 258 SI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +    + +  + +G   V+         +   +  ++
Sbjct: 248 RLIYAEIGRAVERNGHDSVTSRARVAGARKGRLLARAA 285


>gi|149922640|ref|ZP_01911068.1| Squalene/phytoene synthase [Plesiocystis pacifica SIR-1]
 gi|149816526|gb|EDM76023.1| Squalene/phytoene synthase [Plesiocystis pacifica SIR-1]
          Length = 330

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 95/292 (32%), Gaps = 11/292 (3%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           + +   + D       L +       A  L P   R  ++  Y F      + D + +P 
Sbjct: 21  RTDASEAADLAACRAILDEGSKSFAAAARLLPRRIRGDVAAFYAFCRISDDLVDFSDDPA 80

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                L    D               P       +V ++DLP      +IE   +D+   
Sbjct: 81  AAVEALSGRLDRL-----YAGGPDDDPVDRAFGRVVHRHDLPRPIVDALIEGFAWDAEER 135

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                     Y  R++S L  + T+ +         R     G A  +  +   +     
Sbjct: 136 EYETLHDVLGYCARVASSLGVIMTLFMGPRDAQTMARACD-LGAAMQLTNICRDVAEDAG 194

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQN----SDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           R +LY P  +L   G+D + F++         RI+  I+       +Y  +A   +R + 
Sbjct: 195 RERLYLPAALLRERGVDPKHFVANHRDYAGDRRIAEVIERMLAEADEYYRRADAGIRMLP 254

Query: 248 PDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            D  PA      I   + +  +  G +  +     ++  +   +L + + + 
Sbjct: 255 WDSRPAIGAASRIYADIGRVIREQGCEFSAPRAHTSKARKLRLLLGAWLFRT 306


>gi|318060626|ref|ZP_07979349.1| phytoene synthase [Streptomyces sp. SA3_actG]
          Length = 338

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 89/291 (30%), Gaps = 11/291 (3%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R  +                     +LA  L PP  R ++  LY F      + D    
Sbjct: 9   ARITDPALRTAYTTCRTLNATHGRTYFLATRLLPPDRRPAVHALYGFARWADDIVDDLGE 68

Query: 70  PITRDMR---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                 R   L  W+    +  +   A    P    L     +Y + +Q+F D + A   
Sbjct: 69  DTPPAARAATLDRWRAQLLAGLRDRTATE--PVVRALADTAERYAIDHQHFADFMTAMRA 126

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
           D         +    Y    ++ +   +  ++      + +       G A  +   +  
Sbjct: 127 DLAVTDYATYEDLCGYMHGSAAVIGLQMLPVLGTVVPRAEAAPHAAALGRAFQLTNFLRD 186

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKARE 241
           +     RG++Y P D+L A G+DR        SG    RI+ A++  A L      +A  
Sbjct: 187 VGEDLDRGRVYLPADLLAAHGVDRPLLEWSRASGTRDARITAALRAAAALTRGVYREAAP 246

Query: 242 EMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +  + P   P       +   +L      G+  V        L R     
Sbjct: 247 GLAMLDPVARPCIRTAFVLYGGILDAVAADGYAAVHRRAAVPPLRRALVAA 297


>gi|222480882|ref|YP_002567119.1| Squalene/phytoene synthase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453784|gb|ACM58049.1| Squalene/phytoene synthase [Halorubrum lacusprofundi ATCC 49239]
          Length = 321

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 101/279 (36%), Gaps = 7/279 (2%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            R  R      ++A  L P   R     LY F      V D A      + R +  +   
Sbjct: 11  KRIQRRTGKTFHVATRLLPERIRHPTYVLYGFFRVADEVVDAAETAPPDEQRAELDRLRR 70

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
            +  +    ++  P      ++  ++++P++     ++A   D   D      Q E Y  
Sbjct: 71  AALAE---RDTDDPVLEAFAAVCDEHEIPDEDVHAFVDAMASDIETDRYETYDQLESYMD 127

Query: 145 RISSRLIHLATMILDSERYSASL--RVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDI 201
             ++ +  + T I++ +  +           G A  +   I  +      R ++Y PL+ 
Sbjct: 128 GSAAAVGRMMTAIMELDEEAEVKALPHATKLGEAFQMTNFIRDVREDVAERDRVYLPLET 187

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L   G+  +  L+ +  D ++ AI+       +   +    ++Y+  D      +   + 
Sbjct: 188 LRRHGVSEDQILNLEFDDDVAAAIREELVRTERLYEEGVAGIKYLPEDCQLAVLLAAVLY 247

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               +  ++ G+  VS +   + + +   ++ +  K ++
Sbjct: 248 ADHHRLIRDLGYDTVSTTPELSFVRKISLLVRTRWKWQW 286


>gi|302813248|ref|XP_002988310.1| hypothetical protein SELMODRAFT_127608 [Selaginella moellendorffii]
 gi|300144042|gb|EFJ10729.1| hypothetical protein SELMODRAFT_127608 [Selaginella moellendorffii]
          Length = 293

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/291 (21%), Positives = 109/291 (37%), Gaps = 10/291 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPL--YRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +    + +  +R  DY  YL  L  P     R +   L  F+ E    +DTAR+P    +
Sbjct: 4   ASALNYCVNQVRRYDYKNYLCLLQLPRSGGLRDAAFALRAFNVETATAKDTARDPSLATL 63

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF- 134
           RL WWKD  +       A    P    L  + R+  L   +F  +I+A   D+   +   
Sbjct: 64  RLAWWKDSIDKLFSRAAATPEHPVLSMLDHVNRERRLSKHWFSRIIDARVADAELSAPPR 123

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
           D  + E YA   +S L++L           A      + G A  I  L+     H  +  
Sbjct: 124 DVGEIERYAESTASALLYLTLEAAGVRSTKA-DHAASHTGKAAGISLLLEATAHHSSKRV 182

Query: 195 LYFPLDILGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
            Y P+++    G+ +E    G +  + ++ A+   A +   +L KAR   + +  +  P 
Sbjct: 183 CYIPVEVAVKHGVSQEDLYRGVRGDEGVARAVFEVASVAHAHLEKARALAKDVPREASPV 242

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
            +P   T+  L      GF              + L     +   S++  +
Sbjct: 243 MLPAVATDEFLATLMRSGFDPFDPRLRRGVCGVSPLWMLLKLKWHSLRGSY 293


>gi|330683889|gb|EGG95660.1| dehydrosqualene synthase [Staphylococcus epidermidis VCU121]
          Length = 293

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 85/281 (30%), Gaps = 13/281 (4%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
                RD       +++       A        + ++  +Y     +    D  ++    
Sbjct: 1   MNQLERDYNHCHNIMKEHSKTFSYAFDFLDLKRKKAIWAIYAVCRIIDDSIDKYKD---- 56

Query: 74  DMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
             +L       +            +S +     L + +  Y +P + F  +I+    D  
Sbjct: 57  LEQLNGIARDLDVIYSDCDYIQAYQSDAAIMNALSNTLNTYSIPKKPFESLIQYVKEDLV 116

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQL 186
              +        Y + ++  +  L T IL S   +   +  +     G A  I  ++  +
Sbjct: 117 LKEMKTDSDLYEYCYGVAGTVGELLTPILTSSNENNFEQAEEAAIALGKAMQITNILRDV 176

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
              +  G++Y  ++ L    ++  S      +       + +A   ++    A   + Y 
Sbjct: 177 GEDFQNGRIYLSVEKLAQYRVNLHSIYYEGVTPNYIKLWESYATEAVRLYDIALNGINYF 236

Query: 247 LPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
             +V     +       +L   +   +  +      ++L +
Sbjct: 237 DEEVRYIIELAAIAYHEILVEVRKANY-TLHKKVYVSKLKK 276


>gi|254504066|ref|ZP_05116217.1| Squalene and phytoene synthases family [Labrenzia alexandrii
           DFL-11]
 gi|222440137|gb|EEE46816.1| Squalene and phytoene synthases family [Labrenzia alexandrii
           DFL-11]
          Length = 394

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 90/267 (33%), Gaps = 8/267 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D       +R      +LA L+ P   R +   LY F      + D  R   T   +L
Sbjct: 36  HADLRECAAAIRKGSKSFHLASLILPAETRKAALSLYAFCRHSDDLIDDPRADRTALEQL 95

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +   D  +   +G+ A             V+ Y +P      +++    D          
Sbjct: 96  K---DRLDLVYRGIPAPYA--CDRAFARTVQAYGIPKCVPDALLDGFAMDLGERHYKTIA 150

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           Q + YA  +++ +  + ++++ +    A  R     GIA  +  +   +      G+LY 
Sbjct: 151 QVKDYATCVAATVGLMMSLVMRAGDKDALARAAD-LGIAMQLTNIARDVGEDARNGRLYL 209

Query: 198 PLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P D +   GLD E+FL+  + S  +   +         +       +  +  +   A   
Sbjct: 210 PEDWMRDAGLDPEAFLASPKFSPELREVVLRLLAEAGHHYELGHAGIAALPENCRHAIRT 269

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPN 282
            ++  + +      + +  V+      
Sbjct: 270 AALVYQEIGTEIAVNNYDSVTRRAHTR 296


>gi|302522952|ref|ZP_07275294.1| squalene synthase HpnD [Streptomyces sp. SPB78]
 gi|302431847|gb|EFL03663.1| squalene synthase HpnD [Streptomyces sp. SPB78]
          Length = 312

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 81/283 (28%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S    +          +      L P   R ++S +Y F   +  + D    P  +  R
Sbjct: 11  VSAAYGYCETVTGAEAKNFAYGIRLLPGDKRRAMSAVYAFSRRVDDIGDGTLAPEEKTRR 70

Query: 77  LQWWKDIFES-STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L   +++ +   TK +  +   P +V L    R++ +P     ++I+    D    +   
Sbjct: 71  LNECRELLQRVRTKDVAEDDTDPVAVALADTARRFPVPLGALDELIDGVLMDVQGRAYRT 130

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASL----RVIKYAGIAQFIGQLICQLPIHYH 191
             +   Y   ++  +  L+  I      +             G+A  +  ++  +     
Sbjct: 131 WDELADYCRCVAGAIGRLSLGIFGVRPGARDRVRAPEYANTLGLALQLTNILRDVREDAA 190

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P + L   G        +          +            +  + +  +    
Sbjct: 191 NGRTYLPAEDLDKFGCSAGFGSATLPEGADFPGLVHFEVRRARALFDEGYQLLPMLDRRG 250

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 251 GACVSAMAGIYHRLLDRIEQDPDAVLRGRVSLPAREKAYVAVR 293


>gi|162448250|ref|YP_001621382.1| phytoene synthase [Acholeplasma laidlawii PG-8A]
 gi|161986357|gb|ABX82006.1| phytoene synthase [Acholeplasma laidlawii PG-8A]
          Length = 286

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 90/281 (32%), Gaps = 12/281 (4%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLY-RISLSFLYYFHTELMRVRDTARNP 70
           K  K    D       +++     Y A  +      R ++  +Y +   +    D  ++ 
Sbjct: 3   KLSKQLKEDFNKCEAIIKENSKTFYKAFSMLKAKQDRQAIYAIYAYCRVVDDAIDEYKDI 62

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQY---DLPNQYFLDMIEAHFFD 127
                 L  ++    +  KG            L  +++ Y   D   + + D+IE    D
Sbjct: 63  DL----LNSYEAKLMNMIKGNP--PTDFIFRSLNEVIKYYYPKDYDFKPYFDLIEGQRQD 116

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLA-TMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
                         Y + ++  +  +   ++   E       V    G A  I  ++  +
Sbjct: 117 FLFIQPITLDDLLKYCYHVAGVVGEMLSYVLAPKEAIGELKYVATNLGEAMQITNILRDI 176

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                R ++Y P D++      +E   +G  +   +   +  A    K    A E++   
Sbjct: 177 GEDRKRNRIYIPKDVMQQFNYTQEDLETGVINHGFTQMFEYLANYAHKKYEIALEKLHLF 236

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
            PD   P  +   + E ++   + + + + +     +   +
Sbjct: 237 KPDARKPLLLASKMYEEIIHTIRLNNYDVYNIRSVVSDERK 277


>gi|304379767|ref|ZP_07362497.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|304341570|gb|EFM07479.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
          Length = 296

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 29/281 (10%), Positives = 91/281 (32%), Gaps = 2/281 (0%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
           R    +   +  +  + ++        A  L P   R ++  +Y    ++    D   + 
Sbjct: 7   RTSMTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDI 66

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
              +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D + 
Sbjct: 67  QFLNQIKEDIQSIEKYPYEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 126

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                  +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +
Sbjct: 127 TMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDF 186

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
              ++YF    L    +D         ++      + +A +  K      ++++    + 
Sbjct: 187 ENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEA 246

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
            P   +   I   +L   +   +  +       +  +    
Sbjct: 247 QPIIELAARIYIEILDEVRQANY-TLHERVFVEKRKKAKLF 286


>gi|49475359|ref|YP_033400.1| hypothetical protein BH05660 [Bartonella henselae str. Houston-1]
 gi|49238165|emb|CAF27374.1| hypothetical protein BH05660 [Bartonella henselae str. Houston-1]
          Length = 286

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 3/275 (1%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  LR  D DRY++ L +P   R +L+ LY F+ E+ R+R+   NP+  ++RL+WW D
Sbjct: 7   YSLDILRAADRDRYISVLFAPKKKRRALAALYAFNAEIARIRENVHNPLIGEIRLRWWYD 66

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                   +     +P   +L   +  ++LP   FL   +A   D Y++ I      E Y
Sbjct: 67  SIAK--SEMEKSESNPILSDLFMAMTLFNLPKTAFLRYCDAQILDLYHNPIATLYDLEFY 124

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
               +S ++ L+  ILD +         ++AGIAQ +  ++  L     R Q Y P D+L
Sbjct: 125 CGETASIILQLSCQILDPDMAQNFTDAYQHAGIAQGLSGVLRLLSFMQSRYQYYLPADML 184

Query: 203 GAVGLDRESFLSGQNSDRIS-LAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
            A+G+ RE   S + S       I+    L   +  +  E    +   + PAF+P++I  
Sbjct: 185 KALGIKREELESNRISKEQKCHVIEAMVALSRDHYNRFYEYFNMMPKTLKPAFLPLAIIP 244

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           + L+ A   G  +   +     L R W++  ++I 
Sbjct: 245 ASLQKAIQLGAAVFQENAALPLLHRYWFITKAAIS 279


>gi|254283255|ref|ZP_04958223.1| phytoene synthase [gamma proteobacterium NOR51-B]
 gi|219679458|gb|EED35807.1| phytoene synthase [gamma proteobacterium NOR51-B]
          Length = 335

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 88/265 (33%), Gaps = 8/265 (3%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKG 90
                YLA  L P   R S   LY F        D    P+     L       ++   G
Sbjct: 5   GSRSFYLASFLLPAPLRTSACCLYAFCRAADDAVDEGDEPLAALATL---MRRLDAVYAG 61

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
              +        L  IV Q+ LP +    ++E   +D+         +   Y+ R++  +
Sbjct: 62  EPED--HSVDRALALIVVQHRLPRELLDALLEGFSWDASGRRYQTLSEVLDYSARVAGAV 119

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
             L ++++     +A  R     G A  +  +   +      G+LY PLD L   G+D E
Sbjct: 120 GILMSLLMGVRSPNALARAAD-LGAAMQLTNIARDVGEDARAGRLYLPLDWLREAGIDGE 178

Query: 211 SFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQ 268
           +FL   + +  I+   +   E       +A   +  +  +          +   +     
Sbjct: 179 AFLARPEKNSAIASVTRRLVEEANTLYERADSGIAELPRNCRRGIYAARLLYAEIGNRLG 238

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSS 293
              F  VS      +  +   +L +
Sbjct: 239 ELEFDSVSQRAIVGKSNKAALLLKT 263


>gi|312830902|emb|CBX35744.1| squalene/phytoene synthase family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
          Length = 287

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 92/278 (33%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFDNE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A++  K      ++++    +  P 
Sbjct: 181 RVYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYADIAEKDFQDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|182433851|ref|YP_001821570.1| putative phytoene synthase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|182440872|ref|YP_001828591.1| putative phytoene synthase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178462367|dbj|BAG16887.1| putative phytoene synthase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178469388|dbj|BAG23908.1| putative phytoene synthase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 342

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 84/267 (31%), Gaps = 7/267 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              +LA  L P   R ++   Y F      + D   +  T   R
Sbjct: 16  LRTAYTHCRHLNARHGKTYFLATRLLPVERRAAVHAPYGFARWADDIVDDLDSTATVTER 75

Query: 77  LQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
                 +      G     +  P    L     +Y + +++F D + +   D        
Sbjct: 76  AAALTALEGQLENGLRGGRATEPVIQALADTAGRYGIDHRHFADFLASMRSDLTVTGYAS 135

Query: 136 CKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                 Y    ++ +   +  ++    R+  +       GIA  +   +  +     RG+
Sbjct: 136 LNDLGGYMHGSAAVIGLQMLPVLGTVTRHEEAAGPAAALGIAFQLTNFLRDVGEDLDRGR 195

Query: 195 LYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
           LY P D++ A G+DR        +G    RI+ A++ FA        +A   +  + P  
Sbjct: 196 LYLPADLIAAYGVDRARLEWSRRTGTRDPRITDALRAFAAHTRTVYRQALPGLGMLDPVA 255

Query: 251 FPAFIPV-SITESVLKHAQNHGFKIVS 276
            P       +   +L   +   + ++ 
Sbjct: 256 RPCIRTAFVLYSGILDAIEAEEYAVLH 282


>gi|289642100|ref|ZP_06474252.1| squalene synthase HpnD [Frankia symbiont of Datisca glomerata]
 gi|289508063|gb|EFD29010.1| squalene synthase HpnD [Frankia symbiont of Datisca glomerata]
          Length = 301

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 87/295 (29%), Gaps = 11/295 (3%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           +T + R                 R+   +      L P   R +LS +Y F   L  + D
Sbjct: 1   MTSDGRFRSPTVEEAYASCEALTREAARNFAYGIRLLPVDKRAALSAVYAFARRLDDIGD 60

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                  + +RL   +             S  P  + L    R++ +P   F ++I+   
Sbjct: 61  GDLPLEEKAIRLAAARADITGLGAA----SSDPVLIALDDACRRFPIPVDAFCELIDGVE 116

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI---KYAGIAQFIGQL 182
            D    +         Y  R++  +  L+  I  ++   A           GIA     +
Sbjct: 117 MDLRGVTYESFDDLVEYCRRVAGTIGRLSLGIFGTQAAHADAGAATVADELGIALQQTNI 176

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRE---SFLSGQNSDRISLAIKIFAELGLKYLFKA 239
           +  +      G++Y P   L   G+          G   D +   ++  A+   ++  + 
Sbjct: 177 LRDVREDLITGRIYLPRAELEKAGITLALGPDGRLGGPEDALVEYLRECAQRADEWYGRG 236

Query: 240 REEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            + +  +             I   + +  +     ++    +     +      S
Sbjct: 237 LKLLTMLDRRSAACCGAMAGIYLRLNRRIRTDPAPVLQQRLSLPGWEKAVVAARS 291


>gi|169791834|pdb|2ZCO|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus
 gi|169791835|pdb|2ZCP|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Farnesyl Thiopyrophosphate
 gi|169791836|pdb|2ZCP|B Chain B, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Farnesyl Thiopyrophosphate
 gi|169791837|pdb|2ZCQ|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bisphosphonate Bph-652
 gi|169791838|pdb|2ZCR|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bisphosphonate Bph-698
 gi|169791839|pdb|2ZCS|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bisphosphonate Bph-700
 gi|257097131|pdb|2ZY1|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bisphosphonate Bph-830
 gi|312597214|pdb|3ACW|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bph-651
 gi|312597215|pdb|3ACX|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bph-673
 gi|312597216|pdb|3ACY|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bph-702
 gi|315364497|pdb|3NPR|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From S. Aureus Complexed With Presqualene
           Diphosphate (Pspp)
 gi|315364498|pdb|3NRI|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From S. Aureus Complexed With Dehydrosqualene
           (Dhs)
          Length = 293

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 90/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 7   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 66

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 67  NQIKEDIQSIEKYPYEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 126

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 127 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 186

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 187 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 246

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +       +  +    
Sbjct: 247 IELAARIYIEILDEVRQANY-TLHERVFVEKRKKAKLF 283


>gi|221141688|ref|ZP_03566181.1| squalene desaturase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|257424039|ref|ZP_05600468.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257426721|ref|ZP_05603123.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429356|ref|ZP_05605743.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432004|ref|ZP_05608367.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257434964|ref|ZP_05611015.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus M876]
 gi|282906896|ref|ZP_06314744.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909870|ref|ZP_06317679.1| squalene synthase HpnD [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282912120|ref|ZP_06319916.1| squalene synthase HpnD [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282912751|ref|ZP_06320543.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus M899]
 gi|282921138|ref|ZP_06328856.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus C427]
 gi|282922381|ref|ZP_06330071.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus C101]
 gi|283959332|ref|ZP_06376773.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293497813|ref|ZP_06665667.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293511396|ref|ZP_06670090.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus M809]
 gi|293550001|ref|ZP_06672673.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|297589360|ref|ZP_06948001.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus MN8]
 gi|205693628|sp|A9JQL9|CRTM_STAAU RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|161788394|emb|CAP47341.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus]
 gi|257273057|gb|EEV05159.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276352|gb|EEV07803.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279837|gb|EEV10424.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282883|gb|EEV13015.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285560|gb|EEV15676.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus M876]
 gi|269942135|emb|CBI50548.1| squalene desaturase [Staphylococcus aureus subsp. aureus TW20]
 gi|282314602|gb|EFB44988.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus C101]
 gi|282315553|gb|EFB45937.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus C427]
 gi|282322851|gb|EFB53170.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus M899]
 gi|282323816|gb|EFB54132.1| squalene synthase HpnD [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326444|gb|EFB56748.1| squalene synthase HpnD [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282329795|gb|EFB59316.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|283788924|gb|EFC27751.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919048|gb|EFD96124.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096744|gb|EFE27002.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291465354|gb|EFF07886.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus M809]
 gi|297577871|gb|EFH96584.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus MN8]
 gi|302752422|gb|ADL66599.1| squalene/phytoene synthase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|312437018|gb|ADQ76089.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315195064|gb|EFU25452.1| squalene desaturase [Staphylococcus aureus subsp. aureus CGS00]
 gi|329315242|gb|AEB89655.1| Dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 287

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 90/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +       +  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVEKRKKAKLF 277


>gi|297191517|ref|ZP_06908915.1| phytoene synthase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150967|gb|EFH30902.1| phytoene synthase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 340

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 89/271 (32%), Gaps = 7/271 (2%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R  +           R         +LA  L P   R ++  LY F      + D    
Sbjct: 11  ARISDPGLRAAYRHCRRLNARHGRTYFLATRLLPVHRRPAVHALYGFARWADDIVDDPAC 70

Query: 70  PITRDMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
             T + R +    +      G     S  P    +    R Y +P+++F D + +   D 
Sbjct: 71  ARTPEARDRQLARLEGELASGLRTGRSSEPVVRAVADTARTYAIPHEHFADFMASMRDDL 130

Query: 129 YNDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
                   +    Y    ++ +   +  ++        +       GIA  +   +  + 
Sbjct: 131 TVTDYATYEDLRSYMHGSAAVIGLQMMPVLGTVVPQEVAAPHAAALGIAFQLTNFLRDVG 190

Query: 188 IHYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
               RG++Y P D+L A G DR        +G+   RI  A++  A+L      +AR  +
Sbjct: 191 EDLDRGRVYLPADLLAAHGADRALLEWSRATGKPDRRIRAALEAAADLTRSVYRQARPGI 250

Query: 244 RYILPDVFPAFI-PVSITESVLKHAQNHGFK 273
             + P   P      ++   +L    +  + 
Sbjct: 251 DMLDPRARPCIRTAYTLYGGILDAIADDDYA 281


>gi|253730240|ref|ZP_04864405.1| possible phytoene synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253726049|gb|EES94778.1| possible phytoene synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|320138968|gb|EFW30854.1| phytoene/squalene synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 296

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 29/281 (10%), Positives = 92/281 (32%), Gaps = 2/281 (0%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
           R    +   +  +  + ++        A  L P   R ++  +Y    ++    D   + 
Sbjct: 7   RTSMTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDI 66

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
              +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D + 
Sbjct: 67  QFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHF 126

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                  +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +
Sbjct: 127 TMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDF 186

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
              ++YF    L    +D         ++      + +A +  K      ++++    + 
Sbjct: 187 DNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEA 246

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
            P   +   I   +L   +   +  +      ++  +    
Sbjct: 247 QPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 286


>gi|88706669|ref|ZP_01104372.1| phytoene synthase [Congregibacter litoralis KT71]
 gi|88699165|gb|EAQ96281.1| phytoene synthase [Congregibacter litoralis KT71]
          Length = 371

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 85/274 (31%), Gaps = 8/274 (2%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D+      +R      +LA  L P   R ++  LY F  E     D   +       L  
Sbjct: 26  DTAHCRGMIRTGSKSFFLASHLLPSGLRGAVFALYAFCREA---DDAIDDGDDPMAELAI 82

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           +++   +          +     L  +V  Y LP +    +++   +D  + +  D    
Sbjct: 83  FRERLSAVYGE--GVPDNTVDRALARVVHDYALPRELLEALLQGFAWDVQSRAYKDLGSV 140

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y  R++  +  +  +++        L      G+A  +  +   +      G++Y P 
Sbjct: 141 YGYGVRVAGSVGVMMALLMGVRD-PGMLARAADLGVAMQLTNIARDVGEDARAGRVYLPK 199

Query: 200 DILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
             L  VGL  ++ + + + S  ++  +            +A   +  +     P      
Sbjct: 200 RWLREVGLTPQALIENPRFSPELASVVARLLSAAECLYARADSGIAGLPARCRPGIYAAR 259

Query: 259 -ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +   +       G   VS     +   +     
Sbjct: 260 KLYAGIGHELLRRGGDSVSQRTVLSSHRKFLLAA 293


>gi|282917915|ref|ZP_06325665.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus D139]
 gi|283767641|ref|ZP_06340556.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus H19]
 gi|282318200|gb|EFB48560.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus D139]
 gi|283461520|gb|EFC08604.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus H19]
          Length = 287

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 88/278 (31%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             + + +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMAMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +     S       L  + +  ++  Q F ++I+  + D      
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFHSDRRIMRALQHVAQHKNIAFQSFYNLIDTVYKDQQFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL          V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQIYDVARRLGESLQLINILRDVGEDFENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|15925552|ref|NP_373086.1| squalene desaturase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15928141|ref|NP_375674.1| squalene synthase [Staphylococcus aureus subsp. aureus N315]
 gi|156980877|ref|YP_001443136.1| squalene desaturase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255007334|ref|ZP_05145935.2| squalene desaturase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794343|ref|ZP_05643322.1| squalene synthase [Staphylococcus aureus A9781]
 gi|258407308|ref|ZP_05680452.1| squalene synthase [Staphylococcus aureus A9763]
 gi|258420005|ref|ZP_05682962.1| squalene synthase [Staphylococcus aureus A9719]
 gi|258428357|ref|ZP_05688181.1| squalene synthase [Staphylococcus aureus A9299]
 gi|258443032|ref|ZP_05691520.1| squalene synthase [Staphylococcus aureus A8115]
 gi|258445467|ref|ZP_05693656.1| squalene synthase [Staphylococcus aureus A6300]
 gi|258449026|ref|ZP_05697134.1| squalene synthase [Staphylococcus aureus A6224]
 gi|258453679|ref|ZP_05701656.1| squalene synthase [Staphylococcus aureus A5937]
 gi|269204195|ref|YP_003283464.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus ED98]
 gi|282894814|ref|ZP_06303039.1| dehydrosqualene synthase [Staphylococcus aureus A8117]
 gi|282927058|ref|ZP_06334683.1| dehydrosqualene synthase [Staphylococcus aureus A10102]
 gi|296276388|ref|ZP_06858895.1| squalene desaturase [Staphylococcus aureus subsp. aureus MR1]
 gi|297244314|ref|ZP_06928204.1| dehydrosqualene synthase [Staphylococcus aureus A8796]
 gi|81705010|sp|Q7A3E1|CRTM_STAAN RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|81780867|sp|Q99R75|CRTM_STAAM RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|13702512|dbj|BAB43653.1| squalene synthase [Staphylococcus aureus subsp. aureus N315]
 gi|14248336|dbj|BAB58724.1| squalene desaturase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156723012|dbj|BAF79429.1| squalene desaturase [Staphylococcus aureus subsp. aureus Mu3]
 gi|257788315|gb|EEV26655.1| squalene synthase [Staphylococcus aureus A9781]
 gi|257841094|gb|EEV65544.1| squalene synthase [Staphylococcus aureus A9763]
 gi|257843964|gb|EEV68356.1| squalene synthase [Staphylococcus aureus A9719]
 gi|257849821|gb|EEV73784.1| squalene synthase [Staphylococcus aureus A9299]
 gi|257851638|gb|EEV75573.1| squalene synthase [Staphylococcus aureus A8115]
 gi|257855727|gb|EEV78653.1| squalene synthase [Staphylococcus aureus A6300]
 gi|257857713|gb|EEV80606.1| squalene synthase [Staphylococcus aureus A6224]
 gi|257864155|gb|EEV86906.1| squalene synthase [Staphylococcus aureus A5937]
 gi|262076485|gb|ACY12458.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus ED98]
 gi|282591105|gb|EFB96179.1| dehydrosqualene synthase [Staphylococcus aureus A10102]
 gi|282762751|gb|EFC02886.1| dehydrosqualene synthase [Staphylococcus aureus A8117]
 gi|285818223|gb|ADC38710.1| Dehydrosqualene synthase [Staphylococcus aureus 04-02981]
 gi|297179092|gb|EFH38337.1| dehydrosqualene synthase [Staphylococcus aureus A8796]
 gi|315130788|gb|EFT86773.1| squalene desaturase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329723696|gb|EGG60225.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           21172]
          Length = 287

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 91/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFDNE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RVYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|21284212|ref|NP_647300.1| squalene desaturase [Staphylococcus aureus subsp. aureus MW2]
 gi|49487341|ref|YP_044562.1| squalene desaturase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57652299|ref|YP_187369.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus COL]
 gi|87161120|ref|YP_495133.1| squalene desaturase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196508|ref|YP_501333.1| squalene desaturase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|151222674|ref|YP_001333496.1| squalene desaturase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161510763|ref|YP_001576422.1| squalene desaturase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|258451504|ref|ZP_05699532.1| squalene desaturase [Staphylococcus aureus A5948]
 gi|262049165|ref|ZP_06022041.1| squalene synthase [Staphylococcus aureus D30]
 gi|262051466|ref|ZP_06023688.1| squalene synthase [Staphylococcus aureus 930918-3]
 gi|282922941|ref|ZP_06330628.1| dehydrosqualene synthase [Staphylococcus aureus A9765]
 gi|284025582|ref|ZP_06379980.1| squalene desaturase [Staphylococcus aureus subsp. aureus 132]
 gi|294849666|ref|ZP_06790407.1| dehydrosqualene synthase [Staphylococcus aureus A9754]
 gi|297209611|ref|ZP_06926008.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300910624|ref|ZP_07128075.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|81648595|sp|Q6G6B2|CRTM_STAAS RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|81693678|sp|Q5HCY8|CRTM_STAAC RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|81761958|sp|Q8NUQ5|CRTM_STAAW RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|122538623|sp|Q2FV59|CRTM_STAA8 RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|123484383|sp|Q2FDU5|CRTM_STAA3 RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|166898078|sp|O07854|CRTM_STAAE RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|21205655|dbj|BAB96348.1| squalene desaturase [Staphylococcus aureus subsp. aureus MW2]
 gi|49245784|emb|CAG44264.1| squalene desaturase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57286485|gb|AAW38579.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus COL]
 gi|87127094|gb|ABD21608.1| squalene desaturase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87204066|gb|ABD31876.1| squalene desaturase, putative [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150375474|dbj|BAF68734.1| squalene desaturase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160369572|gb|ABX30543.1| squalene desaturase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257860798|gb|EEV83618.1| squalene desaturase [Staphylococcus aureus A5948]
 gi|259160636|gb|EEW45658.1| squalene synthase [Staphylococcus aureus 930918-3]
 gi|259162679|gb|EEW47245.1| squalene synthase [Staphylococcus aureus D30]
 gi|282593322|gb|EFB98318.1| dehydrosqualene synthase [Staphylococcus aureus A9765]
 gi|294823469|gb|EFG39897.1| dehydrosqualene synthase [Staphylococcus aureus A9754]
 gi|296885750|gb|EFH24686.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300888147|gb|EFK83341.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|315197012|gb|EFU27353.1| squalene desaturase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320144499|gb|EFW36263.1| phytoene/squalene synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329729197|gb|EGG65607.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           21189]
 gi|329730066|gb|EGG66456.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus
           21193]
          Length = 287

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 91/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFDNE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|120402586|ref|YP_952415.1| squalene/phytoene synthase [Mycobacterium vanbaalenii PYR-1]
 gi|119955404|gb|ABM12409.1| phytoene synthase [Mycobacterium vanbaalenii PYR-1]
          Length = 315

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 89/287 (31%), Gaps = 9/287 (3%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT- 72
           +                     YLA  L  P  R ++  LY F      + D   +  T 
Sbjct: 13  DPELRDAYRQCRTINAQHGKTFYLATRLLAPRQRPAVHALYGFARFADDILDDLADTATV 72

Query: 73  --RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
             R  RLQ              +    P    ++   R YD+    F D + +   D   
Sbjct: 73  EQRAERLQQLSTRLFHCLVDKESCEGDPILTAVVHTARTYDIGWDLFDDFLASMRMDLTV 132

Query: 131 DSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
               D +  E Y +  +  +   +  ++        +       G A  +   +  +   
Sbjct: 133 TDYPDRQALERYMYGSAEVIGLQMLPVLGTVGPREEAAPYAAALGKAFQLTNFLRDVDED 192

Query: 190 YHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             RG++Y P D L A G+DRE       +G+   R+  A+     +  +   +AR  +  
Sbjct: 193 LTRGRVYLPADELAAHGVDRELLTWCQANGRIEPRVRAALAEQHAITRQVYQQARPGIAA 252

Query: 246 ILPDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
           + P   P       +   +L   +   F+I     T  +  R     
Sbjct: 253 LAPPSRPCVAAALTLYSDILSRIEAIDFEIFGRRATVGKPRRLVVAA 299


>gi|302760969|ref|XP_002963907.1| hypothetical protein SELMODRAFT_80277 [Selaginella moellendorffii]
 gi|300169175|gb|EFJ35778.1| hypothetical protein SELMODRAFT_80277 [Selaginella moellendorffii]
          Length = 293

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/291 (21%), Positives = 109/291 (37%), Gaps = 10/291 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPL--YRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +    + +  +R  DY  YL  L  P     R +   L  F+ E    +DTAR+P    +
Sbjct: 4   ASALNYCVNQVRRYDYKNYLCLLQLPRSGGLRDAAFALRAFNVETATAKDTARDPSLATL 63

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF- 134
           RL WWKD  +       A    P    L  + R+  L   +F  +I+A   D+   +   
Sbjct: 64  RLAWWKDSIDKLFSRAAATPEHPVLSMLDHVNRERRLSKHWFSRIIDARVADAELSAPPR 123

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
           D  + E YA   +S L++L           A      + G A  I  L+     H  +  
Sbjct: 124 DVGEIERYAESTASALLYLTLEAAGVRSTKA-DHAASHTGKAAGISLLLEATAHHSAKRV 182

Query: 195 LYFPLDILGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
            Y P+++    G+ +E    G +  + ++ A+   A +   +L KAR   + +  +  P 
Sbjct: 183 CYIPVEVAVKHGVSQEDLYRGVRGDEGVARAVFEVASVAHAHLEKARALAKDVPREASPV 242

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
            +P   T+  L      GF              + L     +   S++  +
Sbjct: 243 MLPAVATDEFLATLMRSGFDPFDPRLRRGVCGVSPLWMLLKLKWHSLRGSY 293


>gi|134100077|ref|YP_001105738.1| phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
 gi|291002930|ref|ZP_06560903.1| phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
 gi|133912700|emb|CAM02813.1| phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
          Length = 327

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 84/283 (29%), Gaps = 9/283 (3%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPIT 72
           +           R   +     +LA  L  P  R ++  LY F   +  V D        
Sbjct: 13  QPAMRAAYRRCRRLNAEHGRTYFLATRLLSPARRPAVHALYGFARWVDDVVDEPARGTDD 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           R+ RL        +        S  P    L+  VR++ +    F D + +   D     
Sbjct: 73  RERRLGRLDRALRAGLD--TGRSDHPILAALVDTVRRHAIDRALFTDFMTSMRMDLTVRD 130

Query: 133 IFDCKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
             D    E Y    ++ +      ++      +A+       G A  +   I  +     
Sbjct: 131 YPDRAALERYVHGSAAVIGLQVLPVLGTVSEVAAAAPYAAELGRAFQLTNFIRDVGEDLD 190

Query: 192 RGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           RG++Y P D L A G+DRE        G    R+  A+             A   +  + 
Sbjct: 191 RGRVYLPADELAAFGVDRERLAWCRRHGGPDARVRRALADQVARTKAAYRAAEPGIALLA 250

Query: 248 PDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
               P      ++   +L      G+++           R   
Sbjct: 251 EASRPCVATAFTLYGEILDRVVESGYEVFGSRLAVANSRRLSI 293


>gi|298695824|gb|ADI99046.1| squalene desaturase [Staphylococcus aureus subsp. aureus ED133]
          Length = 287

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 91/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             + + +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMAMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D      
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQQFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|15790460|ref|NP_280284.1| CrtB1 [Halobacterium sp. NRC-1]
 gi|169236196|ref|YP_001689396.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
           synthase) [Halobacterium salinarum R1]
 gi|10580954|gb|AAG19764.1| phytoene synthase [Halobacterium sp. NRC-1]
 gi|167727262|emb|CAP14048.1| geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene
           synthase) [Halobacterium salinarum R1]
          Length = 322

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 5/272 (1%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R      ++A    P   R     LY F      + D        + R    +     + 
Sbjct: 15  RRTGRTFHIATRFLPERVRYPTYVLYAFFRLTDEIVDDEAPGPPDEQR---RRLAHVRAA 71

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                +   P      ++   +D+P +     I+A   D              Y    S 
Sbjct: 72  ALGDRDPDDPVLAAFAALREDHDIPREEVTTFIDAMQQDVDTARYRSHDDLAEYLRGSSV 131

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDILGAVGL 207
            + ++   I+D+     +       G A  +   +  +        ++Y P   L A G 
Sbjct: 132 AVGYMMLSIMDAPEPERARPHAASLGEAFQLTNFLRDVREDVLDYDRIYLPSQTLAAHGA 191

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKH 266
             +   +   + ++  AI+   +   +        + ++  D  FP      +     + 
Sbjct: 192 SHDDIAALSATPQVRDAIRAELDRTERLYRHGVAGIEHLPADCQFPVLAAAVMYADQHRL 251

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +     ++S   T     R   +  + ++ R
Sbjct: 252 IRAQDCDVLSQRPTLTLRRRLSVVARTWLRWR 283


>gi|297837153|ref|XP_002886458.1| hypothetical protein ARALYDRAFT_475079 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332299|gb|EFH62717.1| hypothetical protein ARALYDRAFT_475079 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 303

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/299 (20%), Positives = 106/299 (35%), Gaps = 19/299 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + ++ +R+ DY  YL  L  P   R +   L  F+ E  R  D A +P    MR
Sbjct: 8   LRSALSYCVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVETARAMDVASDPKIGLMR 67

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---DSI 133
           L WW++  +            P +  L   + ++++   +    +EA   D+     D  
Sbjct: 68  LLWWQEAIDKLYTKKPI--NHPAAQALSWAISEHNISKPWLKRSVEARIRDAQREVDDIP 125

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH--YH 191
              ++ E YA    S L++           +A      + G A  +  L+  LP H   +
Sbjct: 126 ESIEELEKYAEDTVSTLLYNTLQAGGISSTTA-DHAASHIGKASGLVLLLKSLPYHCTRN 184

Query: 192 RGQLYFPLDILGAVGL------DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           R Q Y P D+    GL        E  L   + + +S  +   A +   +L KARE    
Sbjct: 185 RHQSYIPADLAEKHGLLVKQGGRLEILLDNNSREGLSNVVFEIASVANAHLLKARELAGK 244

Query: 246 ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
           +  +  P  +     + +L       F +              L+  + +   S +  F
Sbjct: 245 VPAEAKPVLLHSVPVQVLLDSLNKVQFDVFDPRIQRGVLGVPPLLFQFKLKWYSWRAMF 303


>gi|294789290|ref|ZP_06754528.1| squalene synthase HpnD [Simonsiella muelleri ATCC 29453]
 gi|294482715|gb|EFG30404.1| squalene synthase HpnD [Simonsiella muelleri ATCC 29453]
          Length = 282

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 87/279 (31%), Gaps = 5/279 (1%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
            ++     +             P   + ++  LY +  EL  V D   +       L WW
Sbjct: 4   LIYCQEKAQSSGSSFLAGFRFLPEQQKNAMIILYAYCRELDDVVDDCLDINIARQTLAWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +   +        +   P +  L  IV  + LP     D+I     D ++    +    +
Sbjct: 64  RQDLDKIFTQ--KQPEHPINQALCEIVDMFSLPKDELEDIINGMEMDLHHVRYQNFTDLQ 121

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
           +Y  R++  +  L   IL               G+A  +  +I  +      G++Y PLD
Sbjct: 122 YYCHRVAGVVGRLIVRILGFSENQTLA-YADKLGLALQLTNIIRDVGEDARNGRIYLPLD 180

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSI 259
            L   G+ +ES LS Q +      +        +    A   +            +   I
Sbjct: 181 ELAQFGVSQESILSYQPNQSFEKLMDFQIMRARETYRVAMSLLPEKDKKRQKVGTVMGGI 240

Query: 260 TESVLKHAQNH-GFKIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++L+      G  ++ +        +    +   +  
Sbjct: 241 YYALLEEIARDGGANVLKYKIRIPSPRKFCIAMRVWLFG 279


>gi|291294777|ref|YP_003506175.1| Phytoene synthase [Meiothermus ruber DSM 1279]
 gi|290469736|gb|ADD27155.1| Phytoene synthase [Meiothermus ruber DSM 1279]
          Length = 277

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 90/281 (32%), Gaps = 8/281 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
              +   V   +R      Y   LL     R     +Y          D + NP      
Sbjct: 3   MEPNWQAVSAIIRHHSATFYYGSLLFRGETRKGAWAVYAACRIGDDAVDESANP---RAD 59

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W    E +  G+  E        L   + ++++P Q F DM E    D     +   
Sbjct: 60  LDEWWAGIERAYAGVPREDWE---AALAWALARWEIPKQAFADMKEGFLADLNPVRLNTL 116

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++   Y +R++  +  +   I       A        G A  +   +  +      G++Y
Sbjct: 117 EELYTYCYRVAGTVGLMIAPI--GGAGEAGRDAAIKLGQAMQLTNCLRDVGEDLALGRVY 174

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P +++    +  E    G  S R    ++  A+   +   +    ++++        + 
Sbjct: 175 LPAELMRKYEVSLEDLRQGHISPRYIGLMRELAQEARRLYREGLAGLKHLKTGRGAVALA 234

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               + +L   + +G+  +S   + +   R   +  +   +
Sbjct: 235 ALQYQGILDKLEINGWDNLSRRASLSAYERVMLLPKAIWLR 275


>gi|70725491|ref|YP_252405.1| squalene desaturase [Staphylococcus haemolyticus JCSC1435]
 gi|123661220|sp|Q4L976|CRTM_STAHJ RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|68446215|dbj|BAE03799.1| squalene desaturase [Staphylococcus haemolyticus JCSC1435]
          Length = 285

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 78/277 (28%), Gaps = 9/277 (3%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
                 +  +  + ++D       A  + P   R ++  +Y     +    D  ++    
Sbjct: 1   MSTLEENYQYCHQIMKDYSKSFSYAFDMLPEQQRRAIWAIYAVCRIVDDSIDVHQD---- 56

Query: 74  DMRLQWWKDIFESSTKGLIA--ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
              L       ++         ES              + +  Q   D+I+    D + +
Sbjct: 57  VEYLHKINRDVKAIEHQTTTTFESDDRIMTAFADAATHFQMNFQALYDLIDTVEADQHFE 116

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                +    Y + ++  +  L   IL +     +    K  G A  +  ++  +   Y 
Sbjct: 117 MFETDRGLLDYCYGVAGTVGVLLIPILATPPSDEAYEYGKQLGEALQLTNILRDVGEDYR 176

Query: 192 RGQLYFPLDILGAVGLDRES-FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G++YF    L    +         Q SD      + +A L           +     + 
Sbjct: 177 NGRIYFSKARLNEFNVSIADEIERDQLSDNYIKIWEFYATLADNNYDMVLNHLDVYNEES 236

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
                +   +   +L   +   +  +      ++  +
Sbjct: 237 RMIIELAAQVYRGILTEVRKADY-SLKDRAYVSKWKK 272


>gi|258424903|ref|ZP_05687774.1| squalene desaturase [Staphylococcus aureus A9635]
 gi|257844737|gb|EEV68780.1| squalene desaturase [Staphylococcus aureus A9635]
          Length = 287

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 91/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MAMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFQSNRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERIFVDKRKKAKLF 277


>gi|312140163|ref|YP_004007499.1| phytoene synthase [Rhodococcus equi 103S]
 gi|311889502|emb|CBH48819.1| putative phytoene synthase [Rhodococcus equi 103S]
          Length = 320

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 88/286 (30%), Gaps = 19/286 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
           T   +               +     YLA  L P   R ++  LY F   +  V D    
Sbjct: 2   TPPRDSDLGAAYRMCRELAAEHGRTYYLATRLLPADRRPAVHALYGFARTVDDVVDVNSA 61

Query: 70  PITRDMRLQWWKDIFE--------SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
               D   +    +           + + +      P    +   + +Y +P +YF   +
Sbjct: 62  DNAADPAAERIAAVDRIEAELAAALAGRPVTDPRSGPVVRAVADTIDRYAIPVEYFRAFL 121

Query: 122 EAHFFDS-----YNDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGI 175
            +   D      + D   D      Y +  +  +   +  ++  + R   +       G 
Sbjct: 122 ASMRMDIPGTPDFQDVYPDMATLRRYMYGSAVVIGLQMLPVLGTTTRLDEAKPHAAALGE 181

Query: 176 AQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS----GQNSDRISLAIKIFAEL 231
           A  +   +  +     RG++Y P D L A G+D E        G    R+  A+   A L
Sbjct: 182 AFQLTNFVRDVGEDLARGRVYLPADDLAAFGVDTELLRHCRETGLVDPRVRRALGHVAAL 241

Query: 232 GLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFKIVS 276
                 +A   +  + P   P       +   +L   +  GF++  
Sbjct: 242 TRALYREAEPGLNMLDPRARPGIRAAYTLYSEILDEVERSGFRVFD 287


>gi|253734003|ref|ZP_04868168.1| possible phytoene synthase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253728002|gb|EES96731.1| possible phytoene synthase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 287

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 92/278 (33%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L ++ +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFQSDRRIMMALQNVSQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFDNE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|312597217|pdb|3ADZ|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Intermediate Pspp
 gi|315364444|pdb|3LGZ|B Chain B, Crystal Structure Of Dehydrosqualene Synthase Y129a From
           S. Aureus Complexed With Presqualene Pyrophosphate
          Length = 293

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 27/278 (9%), Positives = 89/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 7   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 66

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 67  NQIKEDIQSIEKYPYEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 126

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +     + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 127 ETDAELFGACYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 186

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 187 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 246

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +       +  +    
Sbjct: 247 IELAARIYIEILDEVRQANY-TLHERVFVEKRKKAKLF 283


>gi|283471782|emb|CAQ50993.1| dehydrosqualene synthase (Diapophytoene synthase)
           (4,4'-diapophytoene synthase) (DAP synthase)
           [Staphylococcus aureus subsp. aureus ST398]
          Length = 287

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 89/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             + + +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMAMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +     S       L  + +  ++  Q F ++I+  + D      
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFHSDRRIMRALQHVAQYKNIAFQSFYNLIDTVYKDQQFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGGNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|147784698|emb|CAN63693.1| hypothetical protein VITISV_026816 [Vitis vinifera]
          Length = 303

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 56/299 (18%), Positives = 105/299 (35%), Gaps = 17/299 (5%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
                   + ++ +R+ DY  YL  +  PP  R +   +  F+ E  R  D A +P    
Sbjct: 8   STIQAAFSYCVQQVRNYDYHHYLCNIELPPNMRKAAFAIRAFNVETARAMDIASDPRVGL 67

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---D 131
           MRL WW++  +        E   P +  L S+V ++ +   +    +EA   D+     D
Sbjct: 68  MRLLWWQEAIDKIFANKTIE--HPTAQALASVVSEHKISKGWMKRSVEARINDARREVTD 125

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                ++ E YA    S L++           +A      + G A  +  L+  LP H +
Sbjct: 126 MPETIEELERYAEDTVSTLLYTTLQAGGIRSTAA-DHAASHIGKASGLLLLLRSLPYHAN 184

Query: 192 RGQL--YFPLDILGAVGLDRESFLSGQNS----DRISLAIKIFAELGLKYLFKAREEMRY 245
           R +   Y P D+     L        +      + +   +   A +   +L KAR+    
Sbjct: 185 RNRQFPYIPKDLAANHNLLDTQGGRSEIRMDSPEGLCDVVFDMASVANAHLEKARQLAGT 244

Query: 246 ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHS-----HTPNQLVRPWYMLSSSIKKRF 299
           +  +  P  +P    + +L       F +              L     +   S + ++
Sbjct: 245 VPAEALPVLLPAVPAQVILDSLSRVQFNVFDPRMARGILGIPPLXFQLKLKWHSWRGKY 303


>gi|110634145|ref|YP_674353.1| squalene/phytoene synthase [Mesorhizobium sp. BNC1]
 gi|110285129|gb|ABG63188.1| Squalene/phytoene synthase [Chelativorans sp. BNC1]
          Length = 274

 Score =  166 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 86/270 (31%), Positives = 138/270 (51%), Gaps = 1/270 (0%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           +R  D DRYLA L +P   R +L  LY F+ E+  VR+    P+  ++RLQWW+D  E+ 
Sbjct: 5   VRQADPDRYLATLYAPVEKRGALFALYAFNAEIAAVRERVSQPLPGEIRLQWWQDALENP 64

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                A      +  LL  +R + LP + F +MIEA  FD Y+D +      E Y    +
Sbjct: 65  EDPAAAAGHP-VAAALLDTIRAHHLPVETFRNMIEARVFDLYDDPMPSRTDLEGYCGETA 123

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           S LI L+ ++LD E   ++  +  +AG AQ I  L+  LPIH  RGQ Y P D+L A G 
Sbjct: 124 SALIQLSALVLDPEAAGSTAALAGHAGCAQAIAGLLRLLPIHRRRGQCYIPHDLLQAAGT 183

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
            R+  +SG++    + AI     L   +L         +   + PA++P+++T++ L   
Sbjct: 184 TRDGIISGEDRAGSARAIAAMVALARHHLSAFTNGAGELPASLRPAYLPLALTKAYLDPI 243

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           ++     +S S + + L R W +L  +++ 
Sbjct: 244 ESGAVDPLSESASLSVLRRHWLLLKHAMRG 273


>gi|312597218|pdb|3AE0|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Geranylgeranyl Thiopyrophosphate
 gi|312597219|pdb|3AE0|B Chain B, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Geranylgeranyl Thiopyrophosphate
          Length = 293

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 90/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 7   MTMMDMNFKYCHKIMKKHSKSFSYAADLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 66

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 67  NQIKEDIQSIEKYPYEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 126

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 127 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 186

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 187 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 246

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +       +  +    
Sbjct: 247 IELAARIYIEILDEVRQANY-TLHERVFVEKRKKAKLF 283


>gi|297203850|ref|ZP_06921247.1| squalene synthase HpnD [Streptomyces sviceus ATCC 29083]
 gi|297148512|gb|EDY55938.2| squalene synthase HpnD [Streptomyces sviceus ATCC 29083]
          Length = 316

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 80/290 (27%), Gaps = 7/290 (2%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
                        +          +      L P   R ++S LY F   +  + D A  
Sbjct: 8   PPHTSAPVLAAYSYCEAVTGQQARNFAYGIRLLPTSKRRAMSALYAFSRRVDDIGDGALA 67

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
              +  RL+  + +     +G +AE    P +V L      + +P     ++I+    D 
Sbjct: 68  GDVKAARLEDTRAMLTRVREGSVAEDDTDPVAVALAHAAETFPIPLSGLDELIDGVLMDV 127

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY----SASLRVIKYAGIAQFIGQLIC 184
             ++       + Y   ++  +  L+  +  +E        +       G+A  +  ++ 
Sbjct: 128 RGETYETWDDLKVYCRCVAGAIGRLSLGVFGTEPGARAAERAPEYADTLGLALQLTNILR 187

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
            +      G+ Y P D L   G                +  +            +    +
Sbjct: 188 DVREDAEDGRTYLPADDLAKFGCSAGFKGPKPPEGADFAGLVHFEVRRARALFAEGYRLL 247

Query: 244 RYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             +             I   +L   +     ++    +     + +  + 
Sbjct: 248 PMLDRRSGACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGREKAYVAVR 297


>gi|18407646|ref|NP_564800.1| transferase [Arabidopsis thaliana]
 gi|6630461|gb|AAF19549.1|AC007190_17 F23N19.9 [Arabidopsis thaliana]
 gi|21553608|gb|AAM62701.1| unknown [Arabidopsis thaliana]
 gi|109946495|gb|ABG48426.1| At1g62730 [Arabidopsis thaliana]
 gi|332195877|gb|AEE33998.1| isoprenoid biosynthesis enzyme domain-containing protein
           [Arabidopsis thaliana]
          Length = 304

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 105/299 (35%), Gaps = 19/299 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + ++ +R+ DY  YL  L  P   R +   L  F+ E  R  D A +P    MR
Sbjct: 9   LRSALSYCVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVETARAMDVASDPKIGLMR 68

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---DSI 133
           L WW++  +            P +  L   + ++++   +    ++A   D+     D  
Sbjct: 69  LLWWQEAIDKLYTKKPI--NHPAAQALSWAISEHNISKPWLKRSVDARIRDAQREVDDIP 126

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH--YH 191
               + E YA    S L++           +A      + G A  +  L+  LP H   +
Sbjct: 127 ESIAELEKYAEDTVSTLLYNTLQAGGISSTTA-DHAASHIGKASGLVLLLKSLPYHCTRN 185

Query: 192 RGQLYFPLDILGAVGL------DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           R Q Y P D+    GL        E  L   + + +S  +   A +   +L KARE    
Sbjct: 186 RHQSYIPADLAEKHGLLVKQGGRLEILLDNDSREGLSNVVFEIASVANAHLLKARELAGK 245

Query: 246 ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
           +  +  P  +     + +L       F +              L+  + +   S +  F
Sbjct: 246 VPAEAKPVLLHSVPVQVLLDSLNKVQFDVFDPRIQRGVLGVPPLLFQFKLKWYSWRAMF 304


>gi|257056314|ref|YP_003134146.1| squalene synthase HpnD [Saccharomonospora viridis DSM 43017]
 gi|256586186|gb|ACU97319.1| squalene synthase HpnD [Saccharomonospora viridis DSM 43017]
          Length = 288

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 91/280 (32%), Gaps = 5/280 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
            +     +R  R+   +      L P   R +LS +Y F   +  + D   +   +   L
Sbjct: 4   EQAYDDCVRITREQARNFAYGIRLLPGPKRNALSAVYAFARRIDDIGDGDLSREVKLKGL 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +  +    +   G   ++  P  + L    R+++LP   F ++I+    D          
Sbjct: 64  ETARADLRAMEAGTT-DTDDPVLIALADAARRFELPLDAFDELIDGCRADVLGVGYPTFT 122

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             E Y   ++  +  L+  +  S        +    G+A  +  ++  +      G++Y 
Sbjct: 123 SLERYCRCVAGSVGRLSLAVFGSPDRDRYEPIADDLGVALQLTNILRDVVEDLDNGRVYL 182

Query: 198 PLDILGAVGLDRESFLSG---QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-A 253
           P D L   G   E   SG    ++D ++  ++  A    ++  +    +  +        
Sbjct: 183 PADELKRFGCTLERDDSGAFVDDADDLAALLEFQAVRAQEWYERGLALLDVLDRRSRACC 242

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                I   +L         ++    +     +      +
Sbjct: 243 AAMAGIYHRLLTRMALRPDLVLRGRTSLPSWEKALVAGMA 282


>gi|294632399|ref|ZP_06710959.1| squalene synthase HpnD [Streptomyces sp. e14]
 gi|292835732|gb|EFF94081.1| squalene synthase HpnD [Streptomyces sp. e14]
          Length = 316

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 33/295 (11%), Positives = 83/295 (28%), Gaps = 7/295 (2%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
              ++ +           +          +      L P   R ++S LY F   +  + 
Sbjct: 3   RTVESEQHASAPVLAAYSYCEAVTGQQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDIG 62

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEA 123
           D A     +  RL+  + + +    G + +    P +V L    R + +P     ++I+ 
Sbjct: 63  DGALADDVKAARLKDTRALLDRIRDGAVEDDDTDPVAVALAHAARSFPIPLDGLDELIDG 122

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY----SASLRVIKYAGIAQFI 179
              D   ++       + Y   ++  +  L+  +  +E        +       G+A  +
Sbjct: 123 VLADVRGETYETWDDLKVYCRCVAGAIGRLSLGVFGTEPGARGAERAPEYADTLGLALQL 182

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFK 238
             ++  +      G+ Y P D L   G                +  I            +
Sbjct: 183 TNILRDIREDAEGGRTYLPADDLAKFGCSAGFHGPIPPEGSDFAGLIHFEVRRARALFAE 242

Query: 239 AREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             + +  +             I   +L         ++    +     + +  + 
Sbjct: 243 GYQLLPMLDRRSGACVAAMAGIYRRLLDRIARDPEAVLRGRVSLPGREKAYVAVR 297


>gi|282902471|ref|ZP_06310364.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus C160]
 gi|282596930|gb|EFC01889.1| dehydrosqualene synthase [Staphylococcus aureus subsp. aureus C160]
          Length = 287

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 90/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVTGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +       +  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVEKRKKAKLF 277


>gi|329941852|ref|ZP_08291117.1| putative phytoene synthase [Streptomyces griseoaurantiacus M045]
 gi|329299569|gb|EGG43469.1| putative phytoene synthase [Streptomyces griseoaurantiacus M045]
          Length = 354

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 89/273 (32%), Gaps = 11/273 (4%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD---TARN 69
            +           +         +LA  L P   R ++  LY F      + D       
Sbjct: 12  TDPALRAAYTACRQLNARHGRTYFLATRLLPAARRPAVHALYGFARWADDLVDLPEETAG 71

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           P    + L   +       +    +S  P    L     +Y + +++F+D + +   D  
Sbjct: 72  PEGSAVALDRLERRLVDGLRH--GDSEEPVVRALADTAERYAIDHRHFIDFMASMRADLT 129

Query: 130 NDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                  +    Y    ++ +   +  ++        +       G+A  +   +  +  
Sbjct: 130 VTDYPTYEDLRGYMHGSAAVIGLQMVPVLGTVAPREEAEPYAAALGLAFQLTNFLRDVGE 189

Query: 189 HYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P D+L A G+DRE       +G++  RI+ A++    L      +A   + 
Sbjct: 190 DLDRGRIYLPADLLAAHGVDRELLRWSRDTGRHDPRITTALRAAENLTRGVYRQAVPGLA 249

Query: 245 YILPDVFPAFI-PVSITESVLKHAQNHGFKIVS 276
            + P   P       +   +L      G  ++ 
Sbjct: 250 LLDPVARPCIRTACVLYGGILDAVAEDGHSVLH 282


>gi|30795077|ref|NP_851527.1| putative phytoene synthase [Streptomyces rochei]
 gi|30698450|dbj|BAC76563.1| putative phytoene synthase [Streptomyces rochei]
          Length = 345

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 86/271 (31%), Gaps = 7/271 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +                     +LA  L P   R ++  LY F      + D+      
Sbjct: 12  TDPALRAAYRHCRALNARHGRTYFLATRLLPVERRPAVHALYGFARWADDIVDSLAPGTG 71

Query: 73  RDMRLQWWKD-IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
            D R +       E            P    L    R+Y + + +F D + A   D    
Sbjct: 72  ADARARALAGLQEELEEGLRRGGGGEPVVHALADTARRYAIDHAHFRDFMTAMRSDLTVT 131

Query: 132 SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
           +         Y    ++ +   +  ++        +       G+A  +   +  +    
Sbjct: 132 AYPTYADLRAYMHGSAAVIGLQMLPVLGTVAPREEAEPYAAALGVAFQLSNFLRDVGEDL 191

Query: 191 HRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P D+L   G+DRE       +G+   RI+ A++ FAEL       A   +  +
Sbjct: 192 DRGRVYLPADLLAGHGVDRELLVLSRATGRPDRRITAALREFAELTRGVYRAAMPGVELL 251

Query: 247 LPDVFPAFI-PVSITESVLKHAQNHGFKIVS 276
            P   P       +   +L      G+ ++ 
Sbjct: 252 EPVSRPCIRTAAVLYGGILDAVARDGWAVLH 282


>gi|108757119|ref|YP_629157.1| phytoene synthetase [Myxococcus xanthus DK 1622]
 gi|108460999|gb|ABF86184.1| phytoene synthetase [Myxococcus xanthus DK 1622]
          Length = 336

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 99/313 (31%), Gaps = 26/313 (8%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR 68
           +   ++ + +R  +   +  R      + A  L   L R +   LY F   L  + D   
Sbjct: 2   SPPVDKALVARGYVLAKQVTRHHAKSFFFASYLLFGLRRRAAFALYAFCRRLDDMVDGDD 61

Query: 69  NPITRDM---RLQWWKDIFESSTKGLI-------AESISPF-------------SVELLS 105
                D    RL   +         +                               L  
Sbjct: 62  AASAADALPVRLARARQRVAELYLPMPELASRELGPPADRVKGSEAATPWDAREFAALEH 121

Query: 106 IVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA 165
            VR + +P Q F D+I     D         ++ + Y +R++  +  + T +L     +A
Sbjct: 122 TVRHFRIPEQPFQDLISGMEMDLTKHRYATWEELDLYCYRVAGVVGLMLTPVLGCSDAAA 181

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
                   G A  +  ++  +     RG++Y P + L A GL  +    GQ   R    +
Sbjct: 182 VEPAAD-LGRAMQLTNILRDVREDLERGRVYLPAEELAAFGLSEDDLRRGQVGARWRSFM 240

Query: 226 KIFAELGLKYLFKAREEMRYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +   E    Y  +A   +RY+          +  +I   +L+  +   + + S       
Sbjct: 241 RFQVERSRAYYARAAAGVRYLTGFGSQRMVRLMGAIYGDILRDIEARDYDVFSARAHVTT 300

Query: 284 LVRPWYMLSSSIK 296
             +     ++ ++
Sbjct: 301 RRKLALASAAMVR 313


>gi|255087688|ref|XP_002505767.1| predicted protein [Micromonas sp. RCC299]
 gi|226521037|gb|ACO67025.1| predicted protein [Micromonas sp. RCC299]
          Length = 342

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 94/300 (31%), Gaps = 18/300 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                     + R      + A LL  P  R S+  +Y +  EL    D           
Sbjct: 41  VEAAYTACEASTRASSATFHFATLLMRPTQRRSVQAIYAWCRELDETVDGVEALKAPREE 100

Query: 77  LQWWKDIFESSTKGLIAESIS---PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-- 131
                   E+  + +  +      P      +I R   L    FLDMI     D      
Sbjct: 101 ADRKLSAIEADLRAMFDDDDRGGGPTIALADTIRRTPGLEAGPFLDMIAGMRSDLAVTLD 160

Query: 132 --------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIG 180
                      D      Y +R++  +  +   ++ + R     +        GIA  + 
Sbjct: 161 VNTGLPSVMFDDWPALRAYCYRVAGTVGLMTLPVMGTARGYTMEQASTPGIELGIALQLT 220

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  +     RG+LY PLD +   GL     L G   +R    I+        +  +A 
Sbjct: 221 NILRDVGEDARRGRLYLPLDAIAKHGLTPREILDGVLDERYEALIESEIRRAEAHFARAA 280

Query: 241 EEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +R + P    P      +  ++L+  +++G+   +         +    L   +++ +
Sbjct: 281 GGVRMLAPAARLPVLAAAEVYGALLQKVRDNGYDNHTKRAYTTSWEKL-RALPGLVRRAW 339


>gi|302688297|ref|XP_003033828.1| hypothetical protein SCHCODRAFT_52466 [Schizophyllum commune H4-8]
 gi|300107523|gb|EFI98925.1| hypothetical protein SCHCODRAFT_52466 [Schizophyllum commune H4-8]
          Length = 334

 Score =  165 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 108/291 (37%), Gaps = 10/291 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S    +    +R  DY+ YL     P   +     L  F  EL  V+D   +     +R
Sbjct: 46  VSNPDAYCRDLVRKQDYESYLIGQFFPQERQGGYYALKAFAVELATVQDNVSDVTIGRIR 105

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           +Q+W+D  +    G       P ++ L   +++  LP  Y   +I+A   +    +    
Sbjct: 106 MQFWRDAIKGIQAGNA--PHHPVALALAKAMQEQYLPAYYLKRIIDARDNELMTPTHMTS 163

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +    +A   SS L++L   +L     +       + G+AQ +  L+  LP H   G++ 
Sbjct: 164 ESLVAHAESTSSALLYLQLALLSLSSDNTLSHAASHLGVAQTLAILLRALPFHAKHGRMV 223

Query: 197 FPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAR-------EEMRYILP 248
            P +I    G+ +E     G N+  I  A+  FA L   +L  AR            +  
Sbjct: 224 IPAEITAKHGVRQEEVFREGPNAKGIEDAVYEFATLANDHLITARTTLEQEPRGDGRVPQ 283

Query: 249 DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              PAF+      + L+  +   F              PW++     K+ F
Sbjct: 284 IAMPAFLTGVPVANYLQRLEKANFNAFEPKLQLRDWKLPWHVWRGYYKRMF 334


>gi|323440554|gb|EGA98265.1| squalene desaturase [Staphylococcus aureus O11]
 gi|323443507|gb|EGB01122.1| squalene desaturase [Staphylococcus aureus O46]
          Length = 287

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 93/278 (33%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             + + +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMAMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKHPYEHHHFQSDRRIMMSLQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL +     +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSNHETHQTYDVARRLGESLQLINILRDVGEDFENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEMYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +      ++  +    
Sbjct: 241 IELAARIYIEILDEVRQANY-TLHERVFVDKRKKAKLF 277


>gi|146338679|ref|YP_001203727.1| phytoene synthase [Bradyrhizobium sp. ORS278]
 gi|41018901|gb|AAR98492.1| phytoene synthase [Bradyrhizobium sp. ORS278]
 gi|146191485|emb|CAL75490.1| phytoene synthase [Bradyrhizobium sp. ORS278]
          Length = 346

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 88/280 (31%), Gaps = 8/280 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D     R LR      + A  + P         LY F  E     D     +     L
Sbjct: 4   EDDIAICRRMLRGGSKTFFAASKVLPRAVGDPAIALYAFCREADDAIDGPGRKVDAVEML 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
               +  E   +G   +S  P    L   V  + +P      ++E   +D+         
Sbjct: 64  ---HERLERIYEGRPDDS--PVDRALAGAVAAFAIPRALPEALLEGLAWDAQGRRYDTLS 118

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               YA R++  +  + ++++         R     GIA  +  +   +      G+LY 
Sbjct: 119 DVLAYAVRVAGTVGVMMSLLMHRRDAETVGRACD-LGIAMQLTNIARDVGEDARNGRLYL 177

Query: 198 PLDILGAVGLDRESFLSGQ-NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P   L   GLD E++ +     DRI+        +   +  +A   +  +  +  P    
Sbjct: 178 PRQWLRETGLDVETWRAAPFFDDRIARVTARLLAVADVFYARAAAGIADLPWNCRPGIHA 237

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             +    + +      F  +S     +   +   +  +++
Sbjct: 238 ARLIYAEIGREVARAEFDSLSRRAVVSMPRKLRLLGKAAL 277


>gi|299743700|ref|XP_002910695.1| hypothetical protein CC1G_15026 [Coprinopsis cinerea okayama7#130]
 gi|298405778|gb|EFI27201.1| hypothetical protein CC1G_15026 [Coprinopsis cinerea okayama7#130]
          Length = 325

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 68/310 (21%), Positives = 121/310 (39%), Gaps = 14/310 (4%)

Query: 1   MVLKFLTKNTR----KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYF 56
           +V +F   + R      +   +  + +    +R  DY+ +L     P   + +   +  F
Sbjct: 19  LVTRFRPTSRRTYATDTDSGIANPAAYCKDLVRKHDYESFLTSPFYPKAKQDAYFAIKAF 78

Query: 57  HTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQY 116
             EL  V++   N +   MR+Q+WKD  +    G       P ++ LL      +LP  +
Sbjct: 79  AVELATVQENVSNSMIGQMRMQFWKDAIKDI--GTGKSPKHPIALALLRASETANLPAYH 136

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIA 176
           F  +I+A   +    S    +    +A   SS +++   + L S   SA      + G+A
Sbjct: 137 FKRIIDARTAELETPSHLTIETLTSHAESTSSTVLY-LLLSLLSLPSSALSHAASHLGVA 195

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKY 235
           Q    L+  LP H  +G++  P +I    G+++E     G  ++ +  A+  FA +   +
Sbjct: 196 QSFTTLLRALPYHATKGRMVIPAEITAKHGVNQEEVFRRGPGAEGLEDAVFEFATIANDH 255

Query: 236 LFKAREEM------RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
           L  ARE          I     P F+    T S L   +   F              P+ 
Sbjct: 256 LITAREMFNQEGMNGLIPDAALPIFLSGVPTASYLSRLEKANFNAFEPQLQVRDWKIPFK 315

Query: 290 MLSSSIKKRF 299
           + S   KK+F
Sbjct: 316 IWSGYYKKKF 325


>gi|224124992|ref|XP_002329864.1| predicted protein [Populus trichocarpa]
 gi|222871101|gb|EEF08232.1| predicted protein [Populus trichocarpa]
          Length = 301

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/299 (19%), Positives = 108/299 (36%), Gaps = 17/299 (5%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
                   + ++ +R+ DY  YL  L  PP  R +   L  F+ E  R  D A +P    
Sbjct: 6   SSLRTAFSYCVQQVRNYDYHHYLCLLELPPNIRKAAFALRAFNVETARAMDVASDPRIGL 65

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---D 131
           MRL WW++  +      + E   P +  L S++ +  +   +    +EA   D+     D
Sbjct: 66  MRLLWWQEAIDKIYANKVIE--HPAAQALSSVISENRISKGWLKRPVEARINDARREVTD 123

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                ++ E YA    S L+++          +A      +AG A  +  L+  LP H  
Sbjct: 124 IPETIEELEKYAEDTISTLLYMTLQAGGIRSTAA-DHAASHAGKASGLLLLLRSLPYHAS 182

Query: 192 RG--QLYFPLDILGAVGLDRES----FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           R     Y P ++    GL  +      +   + + +  A+   A +   +L KAR     
Sbjct: 183 RNRHFCYIPTEVAAKHGLLVKEGGRFEIRLDSRESLCNAVFDMASVANVHLQKARSLAGT 242

Query: 246 ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
           +  +     +P    +  L       F +            + +     +  SS + ++
Sbjct: 243 VPTEARSVLLPAVPAQVFLDTLSRVHFDVFDPRLARGVLGISPVSYQLKLKWSSWRGKY 301


>gi|13471170|ref|NP_102739.1| hypothetical protein mll1068 [Mesorhizobium loti MAFF303099]
 gi|14021914|dbj|BAB48525.1| mll1068 [Mesorhizobium loti MAFF303099]
          Length = 301

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 4/295 (1%)

Query: 4   KFLTKNTRKEEKI-FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           K   +  R    I  S+++  V+  +R  D+DRYL  L +P   R +L  LY F+ E+  
Sbjct: 6   KTAPRPPRSSPSIDMSQNAKIVMDAVRAADHDRYLTALYAPADKREALFSLYAFNAEIAG 65

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           +RD     +  ++RLQWW+D+  +     I     P +  L + +  + LP   F +M+E
Sbjct: 66  IRDRIHEALPGEVRLQWWRDLIAADNDAAIG---HPVADALKATISGHHLPKLAFDNMLE 122

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQL 182
           A  FD Y+D +      E Y    ++ LI LA M+LD         +   AG AQ +  L
Sbjct: 123 ARIFDLYDDPMPSRTDLEGYCGETAAALIQLAAMVLDPVEAPRFAELAGRAGCAQAMTGL 182

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           +  LP+H  RGQ + P DIL A G   E F++G        A+     L  ++L    + 
Sbjct: 183 LLLLPLHRKRGQCFVPADILAAAGSSPEEFVAGDGGPGAQRAVAAMIALAREHLSAFEQG 242

Query: 243 MRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
              +   + PAF+P++++ + L   +      +      + L R W ++  + K 
Sbjct: 243 AAELPASLRPAFLPLALSRAYLDRTEGARQSTLDGVARLSALRRHWLLVRRASKG 297


>gi|218288698|ref|ZP_03492961.1| squalene synthase HpnC [Alicyclobacillus acidocaldarius LAA1]
 gi|218241056|gb|EED08232.1| squalene synthase HpnC [Alicyclobacillus acidocaldarius LAA1]
          Length = 291

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 82/273 (30%), Gaps = 7/273 (2%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D     +  R    +  +  L  P   R     +Y F   +  + D           L  
Sbjct: 11  DFEVCRQLTRSHYENFSVVSLFVPRHLRPHFYSVYAFCRGVDDLGDEYAGDRMA--ALDA 68

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           +++    +      E+ +P    L   +   +LP + FL +IEA+  D    +    +  
Sbjct: 69  YEEELRRAFA---GEATTPAFRALQFTIATCNLPMEPFLRLIEANRRDQRQHTYDTWEDL 125

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y    +  +  L   I          R+      A  +   +  +      G++Y P 
Sbjct: 126 RDYCRYSADPVGRLVLGIFGC-LDDERARLSDATCTALQVANHMQDIDRDLALGRIYVPR 184

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVS 258
             L   G   +   + + +D +   I +  +       + R     + P       +   
Sbjct: 185 ADLEQFGATLDDIRARRATDGVRRCIALEVDRAQALFDEGRRLESLVPPRLARQLKLYRL 244

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             E++L   +  G+   +     +   +    L
Sbjct: 245 GGEAILAAIRRQGYNPFAGRPVVSSKQKLRIAL 277


>gi|258512403|ref|YP_003185837.1| squalene synthase HpnC [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479129|gb|ACV59448.1| squalene synthase HpnC [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 291

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 82/273 (30%), Gaps = 7/273 (2%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D     R  R    +  +  L  P   R     +Y F   +  + D           L  
Sbjct: 11  DFEVCRRLTRSHYENFSVVSLFVPRHLRPHFYSVYAFCRGVDDLGDEFAGDRMA--ALDA 68

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           +++    +      E+ +P    L   +   +LP + FL +IEA+  D    +    +  
Sbjct: 69  YEEELRRAFA---GEATTPAFRALQFTIATCNLPMEPFLRLIEANRRDQRKHTYDTWEDL 125

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y    +  +  L   I          R+      A  +   +  +      G++Y P 
Sbjct: 126 RDYCRYSADPVGRLVLGIFGC-LDDERARLSDATCTALQVANHMQDIDRDLALGRIYVPR 184

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVS 258
             L   G   +   + + +D +   I +  +       + R     + P       +   
Sbjct: 185 ADLEQFGATLDDIRARRATDGVRRCIALEVDRAQALFDEGRRLESLVPPRLARQLKLYRL 244

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             E++L   +  G+   +     +   +    L
Sbjct: 245 GGEAILAAIRRQGYNPFAGRPVVSGKQKLRIAL 277


>gi|307325380|ref|ZP_07604582.1| squalene synthase HpnD [Streptomyces violaceusniger Tu 4113]
 gi|306888849|gb|EFN19833.1| squalene synthase HpnD [Streptomyces violaceusniger Tu 4113]
          Length = 316

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 31/285 (10%), Positives = 78/285 (27%), Gaps = 11/285 (3%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +          +      L P   R ++S LY F   +  + D   +P  +  RL 
Sbjct: 13  AAYRYCEAVTGHQARNFAYGIRLLPTEKRHAMSALYAFSRRVDDIGDGPLDPEAKRARLT 72

Query: 79  WWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             + + +    G I E    P +V +     ++ +P     ++I+    D    +     
Sbjct: 73  DTRALLDRMRGGGIEEDDTDPVAVAVAHAAHRFPIPLDALDELIDGVLMDVAGQTYETWD 132

Query: 138 QFEHYAFRISSRLIHLATMI--------LDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
             + Y   ++  +  L+  +           +    +       G+A  +  ++  +   
Sbjct: 133 DLKVYCRCVAGAIGRLSLGVFGTAPGTGHSEDELERAPYYADTLGLALQLTNILRDVRED 192

Query: 190 YHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              G+ Y P D L   G        +       +  +            +    +  +  
Sbjct: 193 AATGRTYLPADDLAKFGCADAFRGSTAPPDADFTGLVHFEVRRARALFAEGFRLLPLLDR 252

Query: 249 DVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                      I   +L         ++    +     + +  + 
Sbjct: 253 RSGACVSAMAGIYSRLLDRIAKDPAAVLRGRVSLPGHEKAYVAVR 297


>gi|114328645|ref|YP_745802.1| phytoene synthase [Granulibacter bethesdensis CGDNIH1]
 gi|114316819|gb|ABI62879.1| phytoene synthase [Granulibacter bethesdensis CGDNIH1]
          Length = 282

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 92/271 (33%), Gaps = 8/271 (2%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
               R      Y    + P   R+++  +Y F   +  + D       +   L  W+   
Sbjct: 15  EALTRASGTSFYQGMKVLPADRRLAMYAIYAFCRIVDDIADEPAPIEEKRAGLNEWRARI 74

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY-NDSIFDCKQFEHYA 143
            +  +    E+  P +  LL  +R + L    FL +I+    D+          + + Y 
Sbjct: 75  TALYR---GEADDPVTRVLLPAIRTFRLRQDDFLAVIDGMQTDAETKVVAPSWAELDLYC 131

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            +++S +  L+      E   A   V  + G A  +  ++  L     RG+LY P + L 
Sbjct: 132 DQVASAVGRLSVRAFGDESEDADR-VAHHLGRALQLTNILRDLQEDAARGRLYLPREWLV 190

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITES 262
             G+      +   S  +    +   ++   +   A   M       + PA +  +   +
Sbjct: 191 EAGV-PLDARAAMVSPALEGVCRRVVQIARGHYADAFAFMAQCDQRAMRPARLMAATYRA 249

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +L   +  G+       +     + W +L  
Sbjct: 250 ILNRLEQAGWTPP-RRVSLPAWEKLWVLLRH 279


>gi|325676955|ref|ZP_08156627.1| phytoene synthase [Rhodococcus equi ATCC 33707]
 gi|325552255|gb|EGD21945.1| phytoene synthase [Rhodococcus equi ATCC 33707]
          Length = 306

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 19/272 (6%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
                 +     YLA  L P   R ++  LY F   +  V D        D   +    +
Sbjct: 2   CRELAAEHGRTYYLATRLLPADRRPAVHALYGFARTVDDVVDVNSADNAADPAAERIAAV 61

Query: 84  FE--------SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS-----YN 130
                      + + +      P    +   + +Y +P +YF   + +   D      + 
Sbjct: 62  DRIEAELAAALAGRPVTDPRSGPVVRAVADTIDRYAIPVEYFRTFLASMRMDIPGTPDFQ 121

Query: 131 DSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           D   D      Y +  +  +   +  ++  + R   +       G A  +   +  +   
Sbjct: 122 DVYPDMATLRRYMYGSAVVIGLQMLPVLGTTTRLDEAKPHAAALGEAFQLTNFVRDVGED 181

Query: 190 YHRGQLYFPLDILGAVGLDRESFLS----GQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             RG++Y P D L A G+D +        G    R+  A+   A L      +A   +  
Sbjct: 182 LARGRVYLPADDLAAFGVDTDLLRHCRETGLVDPRVRRALGHVAALTRALYREAEPGLNM 241

Query: 246 ILPDVFPAFIPVS-ITESVLKHAQNHGFKIVS 276
           + P   P       +   +L   +  GF++  
Sbjct: 242 LDPRARPGIRAAYTLYSEILDEVERSGFRVFD 273


>gi|254562178|ref|YP_003069273.1| phytoene synthase [Methylobacterium extorquens DM4]
 gi|254269456|emb|CAX25422.1| phytoene synthase [Methylobacterium extorquens DM4]
          Length = 353

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 91/278 (32%), Gaps = 7/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D       +R      + A LL PP  R+S   LY F        D A       +  
Sbjct: 13  AADRSACRAAIRAGSKSFFAASLLLPPAVRVSAYGLYAFCRLSDDAVDEAGGSRAAALA- 71

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              +     +          P    L  ++ ++ +P      ++E   +D+         
Sbjct: 72  ---RLERRLTAACAGRPDNHPADRALTEVLARHAIPEALPRALLEGLAWDTQGRRYDTLS 128

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +   YA R++  +  + T+++      A  R     G+A     +   +      G+LY 
Sbjct: 129 ELAAYAARVAGAVGAMMTLVMGVRDGPALARACD-LGVAMQFTNIARDVGEDARAGRLYL 187

Query: 198 PLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P + L A G+D  +FL+  +    +   +        +   +A   +  +     PA   
Sbjct: 188 PREWLDAAGIDTNAFLAEPRLGPGLQRVVADLLAAADELYARAEPGIAALPLSCRPAIRA 247

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             +    + +  + +G   V+         +   + ++
Sbjct: 248 AGLIYAEIGRAVEANGLDSVTRRARVTGARKAGLLATA 285


>gi|111018122|ref|YP_701094.1| phytoene synthase [Rhodococcus jostii RHA1]
 gi|110817652|gb|ABG92936.1| phytoene synthase [Rhodococcus jostii RHA1]
          Length = 313

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 88/295 (29%), Gaps = 20/295 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR--D 74
            +    +      +     +LA  L P   R ++  LY F   +  + D   +       
Sbjct: 4   LAGSYRYCGAVTAEHGRTYHLATRLLPERRRAAVHSLYGFARTVDDIVDVDPSRTAGDCA 63

Query: 75  MRLQWWKDIFESSTKGLIA-------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
             L               A         +       L  V  +D+P+ YF   +++   D
Sbjct: 64  AELDRIDAALRIGFTDRTAVGPDACSREMRRVLPAFLDTVASFDIPHDYFFAFLQSMRMD 123

Query: 128 SYND-----SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQ 181
                          +   Y +  +  +   +  ++      + +       G A  +  
Sbjct: 124 VPGTVEHRSEYGTMTELRTYMYGSAVVIGLQMLPVLGTIGPVADAEPHAAALGEAFQLTN 183

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLF 237
            +  +     RG++Y P D L A G+D E       SG    RI  A+     +      
Sbjct: 184 FLRDVGEDLDRGRVYLPADELAAFGVDTELLAHSRRSGTTDQRIVRALAHLISVTRSVYR 243

Query: 238 KAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            A   +  +   V P       +   +L   +  G++++    T ++  R    L
Sbjct: 244 DAEPGIAMLDRRVQPGIRTAFVLYSRILDEIERGGYRVLDRRATVSRRNRWATAL 298


>gi|94310882|ref|YP_584092.1| squalene/phytoene synthase [Cupriavidus metallidurans CH34]
 gi|93354734|gb|ABF08823.1| squalene/phytoene synthase [Cupriavidus metallidurans CH34]
          Length = 276

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 89/277 (32%), Gaps = 7/277 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y + LL P   R +L+ L  +  EL  + +   +      RL WW+
Sbjct: 5   QYCQDKAAQSGSSFYYSSLLLPSDRRNALTALQAWRQELDAIVNENHDAGVAHQRLDWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                        +  P S  L   +    LP     +M+ A   D       D      
Sbjct: 65  AELRRLYD---GGAAHPVSQALQPHLDA--LPQAEMAEMLAATEMDLAQSRYLDEIGLLR 119

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y          L   +        +L   +  G++    +++  +      G++Y P+D 
Sbjct: 120 YCRASGGTFGKLTARV-LGHTDPRTLDAAEQLGLSLQRVRIVKDIGGDARHGRIYIPVDT 178

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP-VSIT 260
           L  + +     L  ++SDR    ++  A        +A   +         A +   +I 
Sbjct: 179 LQRLEVPAADILQSRHSDRFVALMREQATQARALYGEALAALPRADRRSQRAQLAFAAIQ 238

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +   F++++       + + W    + +K 
Sbjct: 239 HALLDEIEASDFQVLNQRIDLTPMRKLWIAWKTWLKN 275


>gi|240139766|ref|YP_002964243.1| phytoene synthase [Methylobacterium extorquens AM1]
 gi|240009740|gb|ACS40966.1| phytoene synthase [Methylobacterium extorquens AM1]
          Length = 352

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 93/278 (33%), Gaps = 7/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D       +R      + A LL PP  R+S   LY F        D A       +  
Sbjct: 13  AADRSACRAAIRAGSKSFFAASLLLPPSVRVSAYGLYAFCRLSDDAVDEAGGNRAAALA- 71

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              +     +          P    L  ++ ++ +P +    ++E   +D+         
Sbjct: 72  ---RLERRLTAACAGRPDNHPADRALAEVLARHAIPEKLPRALLEGLAWDTQGRRYDTLS 128

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +   YA R++  +  + T+++      A  R     G+A     +   +      G+LY 
Sbjct: 129 ELAAYAARVAGAVGAMMTLVMGVRDGPALARACD-LGVAMQFTNIARDVGEDARAGRLYL 187

Query: 198 PLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P + L A G+D ++FL+  +    +   +        +   +A   +  +     PA   
Sbjct: 188 PREWLDAAGIDPDAFLAEPRLGPSLQRVVADLLAAADELYARAEPGIAALPLSCRPAIRA 247

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             +    + +  + +G   V+         +   + ++
Sbjct: 248 AGLIYAEIGRAVEANGLDSVTRRARVTGARKAGLLATA 285


>gi|124515095|gb|EAY56606.1| putative phytoene synthase [Leptospirillum rubarum]
          Length = 320

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 84/261 (32%), Gaps = 5/261 (1%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
              ++     P  R  L+  Y F   +  + D   +    + RL  W++ F   T     
Sbjct: 41  TFSVSFFFLDPEARNDLATFYLFCRVVDDIVDETPDKSLAEERLLLWREFFSGETLSEAF 100

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
               P   +L  +V +  +P   F D+++    D     I D +    Y +  +  +   
Sbjct: 101 P--HPLGHDLRDLVHRRRIPLSLFRDILDGMETDLRPVRIPDIEALRRYCYLAAGAVGRA 158

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
              I   E            G A  +  ++  L     R ++Y P D + A G+     L
Sbjct: 159 CIPIFGGE-IEELGEYADSLGEAFQLTNILRDLKSDARRNRIYLPADRMQAYGVSDRDVL 217

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD--VFPAFIPVSITESVLKHAQNHG 271
            G+        ++           +A   +        +  A +       + +  +  G
Sbjct: 218 EGRLHPGFLRLLEEIWMRADDDYRRAVALLSDRKKWKIMKAARVMEVFYREIHRKIRLSG 277

Query: 272 FKIVSHSHTPNQLVRPWYMLS 292
           F +  H    + L++ W +L 
Sbjct: 278 FDVYRHRIRLSPLLKGWLLLR 298


>gi|302548935|ref|ZP_07301277.1| squalene synthase HpnD [Streptomyces viridochromogenes DSM 40736]
 gi|302466553|gb|EFL29646.1| squalene synthase HpnD [Streptomyces viridochromogenes DSM 40736]
          Length = 338

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 7/271 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +                     +LA  L  P  R ++  LY F      + D+      
Sbjct: 12  TDPALRAAYTRCRELNARHGRTYFLATRLLTPDRRPAVHALYGFARWADDIVDSLDGDAG 71

Query: 73  RDMRLQWWKDIFESSTKGLI-AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
            + R +    + +   +GL       P    L     ++ + +++F D + +   D    
Sbjct: 72  PEERARALDRLADDLARGLARGTGGEPVVRALADTAHRHAIEHRHFTDFLASMRSDLTVT 131

Query: 132 SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
           S         Y    ++ +   +  ++        +       GIA  +   +  +    
Sbjct: 132 SYATYDDLRGYMHGSAAVIGLQMLPVLGTVTPRQEAAPHAAELGIAFQLTNFLRDVGEDL 191

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQN----SDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P D+L   G  RE    G++      R++ A++ F  L      +A   +  +
Sbjct: 192 DRGRVYLPQDLLDCHGAHRELLCHGRDTGRTDRRVTAALREFESLTRAAYRRAAPGIAML 251

Query: 247 LPDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
            PD  P       +   +L      G+ ++ 
Sbjct: 252 APDSRPCIRTAFVLYGGILDAVAATGYAVLH 282


>gi|82752143|ref|YP_417884.1| squalene desaturase [Staphylococcus aureus RF122]
 gi|123548746|sp|Q2YWE7|CRTM_STAAB RecName: Full=Dehydrosqualene synthase; AltName:
           Full=4,4'-diapophytoene synthase; Short=DAP synthase;
           AltName: Full=Diapophytoene synthase
 gi|82657674|emb|CAI82123.1| squalene desaturase [Staphylococcus aureus RF122]
          Length = 287

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 90/278 (32%), Gaps = 2/278 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +   +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  NQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI 240

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             +   I   +L   +   +  +       +  +    
Sbjct: 241 IELAARIYIEILDEVRQASY-TLHERVFVYKRKKAKLF 277


>gi|149918169|ref|ZP_01906661.1| Squalene/phytoene synthase [Plesiocystis pacifica SIR-1]
 gi|149820929|gb|EDM80336.1| Squalene/phytoene synthase [Plesiocystis pacifica SIR-1]
          Length = 311

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 92/285 (32%), Gaps = 7/285 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                +  R       +  +A    P   R  +  +Y F        D  R    R   L
Sbjct: 26  EAAYRYCERLATSHYENFPVASRFVPAPLRPHVWAIYAFARTADDFSDEPRFQGRRRECL 85

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             W+   E++      +   P  + L   VR++++P      ++ A   D          
Sbjct: 86  DGWEQYLEAAYH---RDVDHPIFLALRDTVRRHNIPIGPLKALLTAFRMDLTKHRYASFS 142

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +  HY    ++ +  L   +    +        +    A  +   +  L +   RG+ Y 
Sbjct: 143 ELRHYCKHSANPVGQLVLFVHGHRQTELHRFSNE-ICTALQLANFLQDLSVDIPRGRCYL 201

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P + L   G+  +   +G+++      ++   E       + +  +R + P +       
Sbjct: 202 PQEDLIHFGVTWDQLQAGRHTTEFKELMRFEIERVRTMFLRGQPLIRKVSPGLSLELEAT 261

Query: 258 S-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK--KRF 299
                 VL   +   F+++S+  T ++         S +   +RF
Sbjct: 262 WRGGMKVLDLVEAQNFEVLSYRPTLDRRDVVSLAGRSLVSFGRRF 306


>gi|170034981|ref|XP_001845350.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876808|gb|EDS40191.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 285

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 105/273 (38%), Gaps = 6/273 (2%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R  D + +L  LL     R     +  F+ E+ R+  T  +     +RL++W+D      
Sbjct: 15  RQYDKENFLCTLLLKNPERRHALAIRAFNVEIARITGTVSDDKIGQLRLKFWEDTIGRLH 74

Query: 89  KGLIAE--SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
           +    +     P   EL   +    L  +YF  +I +    +        KQ E YA   
Sbjct: 75  RSDNPDHVPEQPVVQELKVAIDAAKLTKRYFQRLISSRLNANLR--FVTTKQLEEYAEHS 132

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
            S +++L   +       A      + G AQ I  L+  +P    R  +  P ++L A G
Sbjct: 133 VSSVLYLLLEVHGVRNVHA-DHAASHLGKAQGIVNLLRSIPRQERRNVVPVPQELLIAHG 191

Query: 207 LDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
           + +E  L  +  D+ +   +   A L  ++L KAR     +  +  P F+P   T   L+
Sbjct: 192 VSQERVLRNKRDDKGVEEVVFQLAGLANQHLEKARALWGSVPKEARPVFLPAVTTGRFLE 251

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             +   F +   S   +  + P  +   + + +
Sbjct: 252 RLRRVNFHLTDSSLLQSDAMLPLAIYWGNFRGK 284


>gi|288222|emb|CAA79957.1| phytoene synthetase [Myxococcus xanthus]
          Length = 336

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 99/313 (31%), Gaps = 26/313 (8%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR 68
           +   ++ + +R  +   +  R      + A  L   L R +   LY F   L  + D   
Sbjct: 2   SPPVDKALVARGYVLAKQVTRHHAKSFFFASYLLFGLRRRAAFALYAFCRRLDDMVDGDD 61

Query: 69  NPITRDM---RLQWWKDIFESSTKGLI-------AESISPF-------------SVELLS 105
                D    RL   +         +                               L  
Sbjct: 62  AASAADALPVRLARARQRVAELYLPMPELASRELGPPADRVKGSEAATPWDAREFAALEH 121

Query: 106 IVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA 165
            VR + +P Q F D+I     D         ++ + Y +R++  +  + T +L     +A
Sbjct: 122 TVRHFRIPEQPFQDLISGMEMDLTKHRYATWEELDLYCYRVAGVVGLMLTPVLGCSDAAA 181

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
                   G A  +  ++  +     RG++Y P + L A GL  +    GQ   R    +
Sbjct: 182 VEPAAD-LGRAMQLTNILRDVREDLERGRVYLPAEELAAFGLSEDDLRRGQVGARWRSFM 240

Query: 226 KIFAELGLKYLFKAREEMRYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +   E    Y  +A   +RY+          +  +I   +L+  +   + + S       
Sbjct: 241 RFQVERSRAYYARAAAGVRYLTGFGSQRMVRLMGAIYADILRDIEARDYDVFSARAHVTT 300

Query: 284 LVRPWYMLSSSIK 296
             +     ++ ++
Sbjct: 301 RRKLALASAAMVR 313


>gi|220922175|ref|YP_002497476.1| Squalene/phytoene synthase [Methylobacterium nodulans ORS 2060]
 gi|219946781|gb|ACL57173.1| Squalene/phytoene synthase [Methylobacterium nodulans ORS 2060]
          Length = 289

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 117/266 (43%), Gaps = 2/266 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                      +RD D DRY A L +PP  R  L  L+ F  E+ RVRD   +P+  ++R
Sbjct: 10  LDWAYAHCEALVRDGDPDRYFATLFAPPAKRPHLFALHAFSLEVARVRDAVSSPMPGELR 69

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  +   +G +     P +  L   + ++ LP Q  + +++A  FD Y+D +   
Sbjct: 70  LQWWRDALQGEARGDV--RAHPVAAALDDTLVRHRLPRQPLVALVDARVFDLYDDPMPST 127

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI L  ++L             +AG+A  +  L+  LP H  RGQ+Y
Sbjct: 128 GDLEGYCGETASSLIRLGGLVLADGGEPGGAAAAGHAGVAYAVTGLLRALPWHARRGQVY 187

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P DIL   G+ RE  +SG+    +  A      L  ++L         I     PAF+P
Sbjct: 188 LPGDILVRHGVTREDIVSGRGGPGLKGACADLRALARRHLDAYAGARAAIAAAAGPAFLP 247

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPN 282
           V++    L+  +   +  +       
Sbjct: 248 VALVAPYLRAMERADYDPLRTVVEIP 273


>gi|9081847|gb|AAF82616.1| phytoene synthase [Tagetes erecta]
          Length = 228

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 80/231 (34%), Gaps = 9/231 (3%)

Query: 52  FLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD 111
            +Y +      + D         M L  W+   E   +             L   V +Y 
Sbjct: 1   AIYVWCRRTDELVDGPNASHITPMALDRWEARLEDLFR---GRPFDMLDAALADTVARYP 57

Query: 112 LPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SAS 166
           +  Q F DMIE    D       +      Y + ++  +  ++  ++  +        + 
Sbjct: 58  VDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESV 117

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  GIA  +  ++  +     RG++Y P D L   GL  E   +G+ +D+    +K
Sbjct: 118 YNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMK 177

Query: 227 IFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVS 276
           +  +    +  +A + +  +      P +  + +   +L   + + +  +S
Sbjct: 178 MQLKRARMFFDEAEKGVTELSAASRWPVWASLPLYRRILDEIEANDYNNLS 228


>gi|242213335|ref|XP_002472496.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728387|gb|EED82282.1| predicted protein [Postia placenta Mad-698-R]
          Length = 295

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/285 (20%), Positives = 105/285 (36%), Gaps = 11/285 (3%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +    +R  DY+ YL     P   R     L  F+ EL  V++   NP    MR+Q+W+
Sbjct: 11  AYCSDLIRKRDYEAYLVSHFWPREIRAHYIALRAFYVELASVQEAVSNPTIGRMRMQFWR 70

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC---KQ 138
           D  +  + G       P ++ +    R  D+P  +   +++A                  
Sbjct: 71  DAIKGISDGRP--PRHPIALAVHDACRHADIPTYHLKRIVDARVSGCSVLHTPTHLTVDS 128

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              +A   +S  ++L   +L+    S       + G+A  +  L+  LP H  +G++  P
Sbjct: 129 LTAHAESTASTFLYLLLSLLNLSASSTLSHAASHLGVAHGVTTLLRALPYHASQGRMVIP 188

Query: 199 LDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRY-----ILPDVFP 252
            +I    G++ E     G ++  +  A+  FA +    L    E  ++     +     P
Sbjct: 189 AEITARHGVNHEEVFRKGGHAKGVDDAVFDFATVANDNLLTCVEMFKHGGDAVVPGKARP 248

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           AF+    T   L+  +   F     S        PW +  S  K 
Sbjct: 249 AFLSGVPTRLYLERLEGVNFDAFHPSLQVRDWKLPWRIWRSYYKG 293


>gi|257386347|ref|YP_003176120.1| Squalene/phytoene synthase [Halomicrobium mukohataei DSM 12286]
 gi|257168654|gb|ACV46413.1| Squalene/phytoene synthase [Halomicrobium mukohataei DSM 12286]
          Length = 321

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 32/264 (12%), Positives = 79/264 (29%), Gaps = 2/264 (0%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D        +      +LA  + P   R +   LY F      V D    P       
Sbjct: 4   TDDIKASKSIQQRTGRTFHLATRVLPKRIRHATYVLYAFFRVADDVVDQPDGPGPAVQHE 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           +  +    +          +        +  ++D+P++     I+A   D          
Sbjct: 64  RLEEIREAALGHASATGDDAAVLEAFAELRERHDIPDEEVNVFIDAMEMDIARARYETFD 123

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLY 196
               Y    +  + ++   ++D E+   +         A  +   +  +    H  G++Y
Sbjct: 124 DLVEYMRGSAVAVGNMMMDVMDVEQPETARPHAAALAEAFQLTNFLRDVREDIHEYGRVY 183

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFI 255
            P   L   G+  +       +D     ++       +   +    +RY+  D  F   +
Sbjct: 184 LPQATLAEHGVTEDDLAEATVTDDFRAVMQTELARTERRYHEGVAGIRYLPEDSQFAVLL 243

Query: 256 PVSITESVLKHAQNHGFKIVSHSH 279
              +     +  +  G+ +++ + 
Sbjct: 244 SAVLYAEHHRLIRARGYDVLTETP 267


>gi|302541343|ref|ZP_07293685.1| squalene synthase HpnD [Streptomyces hygroscopicus ATCC 53653]
 gi|302458961|gb|EFL22054.1| squalene synthase HpnD [Streptomyces himastatinicus ATCC 53653]
          Length = 316

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 84/281 (29%), Gaps = 7/281 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               +          +      L P   R ++S LY F   +  + D A     +  RL 
Sbjct: 17  AAYRYCEAVTGHQARNFAYGIKLLPTEKRHAMSALYAFSRRIDDIGDGALPADAKRARLN 76

Query: 79  WWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             + + +    G I E    P +V L    R++ +P     ++I+    D   ++     
Sbjct: 77  QTRALLDRIRGGAIEEDDTDPVAVALTHAARRFPIPLGGLDELIDGVLKDVAGETYETWD 136

Query: 138 QFEHYAFRISSRLIHLATMILDS----ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
             + Y   ++  +  L+  +  +       S +       G+A  +  ++  +      G
Sbjct: 137 DLKDYCRCVAGAIGRLSLGVFGTVPGARDASRAPEYANTLGLALQLTNILRDVREDAATG 196

Query: 194 QLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           + Y P D L   G       S       ++  ++           +    +  +      
Sbjct: 197 RAYLPADDLAKFGCTTAFHSSVAPADADLTGLVQFEVRRARALFAEGYRLLPMLDRRSGA 256

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                  I   +L+   +    ++    +     + +  + 
Sbjct: 257 CVAAMAGIYRRLLERIAHDPAAVLRGRVSLPGHEKAYVAVR 297


>gi|188582443|ref|YP_001925888.1| squalene/phytoene synthase [Methylobacterium populi BJ001]
 gi|179345941|gb|ACB81353.1| Squalene/phytoene synthase [Methylobacterium populi BJ001]
          Length = 357

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 87/282 (30%), Gaps = 7/282 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             + D       +R      Y A +L PP  R+S   LY F        D A       +
Sbjct: 15  TLADDMAACRTAIRAGSKSFYAASMLLPPSVRVSAYGLYAFCRLSDDAVDEAGGHRGAAV 74

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
                +     +          P    L  ++ ++ +P      ++E   +D+       
Sbjct: 75  A----RLERRLTAALAGRPDNHPADRALAEVIARHAIPEALPRALLEGLAWDAQGRRYDT 130

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 YA R++  +  + T+++      A  R     G+A     +   +      G+L
Sbjct: 131 LSDLAAYAARVAGAVGAMMTLVMGVRDGHALARACD-LGVAMQFTNIARDVGEDARAGRL 189

Query: 196 YFPLDILGAVGLD-RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           Y P   L   G+D R      + +  +   +            +A   +  +     PA 
Sbjct: 190 YLPRAWLDEAGVDLRAFLADPRLNPGLQRVVAGLLAAADGLYARAEPGIAALPLRCRPAI 249

Query: 255 IPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
               +I   + +  + +G   V+     +   +   +  + +
Sbjct: 250 RAAGTIYAEIGRAVEANGLDSVTRRARVSGARKAGLLTGALL 291


>gi|302525467|ref|ZP_07277809.1| squalene synthase HpnD [Streptomyces sp. AA4]
 gi|302434362|gb|EFL06178.1| squalene synthase HpnD [Streptomyces sp. AA4]
          Length = 333

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 85/290 (29%), Gaps = 8/290 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           E           R         +LA  L P   R +   LY F      + D        
Sbjct: 37  EPALRAAYTRCRRINAHHGRTFFLATRLLPARARPAAHALYGFARMADELVDNPEPGTDP 96

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
            + L     + +          + P    L   VR+YD+        + +   D      
Sbjct: 97  AVALDKVAGLVDEVYD--GRAPVDPVLAALADTVRRYDIRRDLVDAFLHSMRMDLTVAEY 154

Query: 134 FDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                   Y +  +  +      +         +       G A  +   +  +     R
Sbjct: 155 ATYADLAEYIYGSACVIGLQMLPVFGTVVPREEAAPSAAALGEAFQLTNFLRDVGEDLDR 214

Query: 193 GQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           G+LY P + L A G+DR   L    S +   R+  A+ +          +A   +  + P
Sbjct: 215 GRLYLPTEELAAFGVDRAVLLEARRSNRPDPRVRAALAVAVSRTRAVYRRAEAGISLLRP 274

Query: 249 DVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +  P       + E +L   +   + +++      +  R    L + +++
Sbjct: 275 ESRPCVRTAITLYEGILDEIEAMDYAVLNRRAVVGKGRRVAVALPALVRR 324


>gi|218531186|ref|YP_002422002.1| Squalene/phytoene synthase [Methylobacterium chloromethanicum CM4]
 gi|218523489|gb|ACK84074.1| Squalene/phytoene synthase [Methylobacterium chloromethanicum CM4]
          Length = 352

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 92/278 (33%), Gaps = 7/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D       +R      + A LL PP  R+S   LY F        D A       +  
Sbjct: 13  AADRSACRAAIRAGSKSFFAASLLLPPSVRVSAYGLYAFCRLSDDAVDEAGGNRAAALA- 71

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              +     +          P    L  ++ ++ +P +    ++E   +D+         
Sbjct: 72  ---RLERRLTAACAGRPDNHPADRALAEVLARHAIPEKLPRALLEGLAWDTQGRRYDTLS 128

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +   YA R++  +  + T+++      A  R     G+A     +   +      G+LY 
Sbjct: 129 ELAAYAARVAGAVGAMMTLVMGVRDGPALARACD-LGLAMQFTNIARDVGEDARAGRLYL 187

Query: 198 PLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P + L A G++  +FL+  +    +   +        +   +A   +  +     PA   
Sbjct: 188 PREWLDAAGINANAFLAEPRLGPSLQRVVADLLAAADELYARAEPGIAALPLSCRPAIRA 247

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             +    + +  + +G   V+         +   + ++
Sbjct: 248 AGLIYAEIGRAVEANGLDSVTRRARVTGARKAGLLAAA 285


>gi|254821739|ref|ZP_05226740.1| phytoene synthase [Mycobacterium intracellulare ATCC 13950]
          Length = 317

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 89/298 (29%), Gaps = 16/298 (5%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR---N 69
           ++                     +LA  L  P  R  +  LY F      + D      +
Sbjct: 12  DDPRLREGYRQCRELNAAHGRTFFLATRLLAPDQRPPVHALYGFARYADDILDDLDPRLD 71

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           P +R  RLQ   + F S    L      P    +    R+Y +    F D + +   D  
Sbjct: 72  PCSRGRRLQQLSERFFSDGAHL----DDPLVAAVTHTARRYRISAGLFEDFLNSMRMDLT 127

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMI-LDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                D +    Y    +  +      I         +       G A  +   +  +  
Sbjct: 128 VTDYPDREALNLYMRGSAEAIGLQVLPILGTVTPMEEAAPYAAALGRAFQLTNFLRDVDE 187

Query: 189 HYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P D L A G+DRE         +   R+  A+    E+  +    A   + 
Sbjct: 188 DLVRGRVYLPTDELAADGVDRELLTWCHAHRRTDPRVRRALAAQHEIARQTYRFAAAGIA 247

Query: 245 YILPDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM---LSSSIKKR 298
            +     P      ++   +L   +   F +  H  T  +  R       L  S + R
Sbjct: 248 TLARRSRPCVATAAALYAEILDCIERSEFAVFDHRATVGRARRLRVAGAGLIRSWRAR 305


>gi|194770585|ref|XP_001967372.1| GF21577 [Drosophila ananassae]
 gi|190618052|gb|EDV33576.1| GF21577 [Drosophila ananassae]
          Length = 330

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/303 (20%), Positives = 114/303 (37%), Gaps = 13/303 (4%)

Query: 8   KNTRKEEKIFSRD------SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           + T+ +E++          +   +  ++  DY+ YL+ LL P   R +   L  F+ E+ 
Sbjct: 30  QQTKTQEQLVDAAESNGYGAKHCMNLVQKYDYENYLSTLLLPRELRRAAFALRAFNVEIS 89

Query: 62  RVRDTAR-NPITRDMRLQWWKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYF 117
           R        P    +RL++W D  +   +     S     P   EL   V    L   Y 
Sbjct: 90  RSVSGESIEPQIGKLRLKFWYDSIDKCFEEDSHGSYVKDQPVLRELKHTVGTRKLNKMYL 149

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQ 177
             ++ A      N +    K+ E YA +  S L+HL   + +            + G AQ
Sbjct: 150 RRLVTARERPV-NKAFESLKELEEYADQAFSSLLHLLVEVSEVRDVQ-VDHAASHLGKAQ 207

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQN-SDRISLAIKIFAELGLKYL 236
            I  ++  +P+   +  +  PL++L   G+ +E  +  ++        I   A     +L
Sbjct: 208 GIATMLRAVPLAGRKQVVCVPLEVLLRHGVSQERIIRSESGDKGAEECIFEVASAANSHL 267

Query: 237 FKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             AR+    +   V   F+    TE  L+  +   F++   S      + P  +   S+ 
Sbjct: 268 NLARQLHDQVPRLVRKIFLSAVSTEGYLERLRRANFQLTHKSCVGRDSMLPARLFWKSLF 327

Query: 297 KRF 299
            RF
Sbjct: 328 NRF 330


>gi|171913972|ref|ZP_02929442.1| putative terpenoid synthase [Verrucomicrobium spinosum DSM 4136]
          Length = 282

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 88/274 (32%), Gaps = 8/274 (2%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-ARNPITRDMRLQWWKDIF 84
           +  R    +   A        +  +   Y F   +  + D        R   LQ W+D  
Sbjct: 10  QIARRSKSNLAFALSTLSRTRKRDMMTFYAFCRVVDDIGDEDTAGVEVRRQLLQEWRDGL 69

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                            E+  + ++Y +      ++I+    D  +      ++   Y +
Sbjct: 70  TQGFPHP-----DDLQSEIAELPKRYPIDRAMMAEIIDGVASDLDHRFYETHEEVLAYCY 124

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           +++  +  ++  I       A        G A  +  +I  +      G++Y PL+ L  
Sbjct: 125 KVACVVGLVSIEIFGYTN-PACKNYAVALGYALQLTNIIRDVGEDARNGRIYLPLEDLRR 183

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESV 263
             +     L G+        ++   +  + +  +A   +       +  A +   +   +
Sbjct: 184 FKVTERQILEGRPPASFEALMEHQYQKAMHFYAEAERLLPEEDRHRMLAAEMMAQVYSEI 243

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           L+  + H F++       ++L +   + + + + 
Sbjct: 244 LQKIRKHRFQVFGRRIGLSKLRKFAILGAYTARG 277


>gi|251773054|gb|EES53610.1| putative phytoene synthase [Leptospirillum ferrodiazotrophum]
          Length = 322

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 97/297 (32%), Gaps = 7/297 (2%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           FLT++        ++        +R  D   Y +  L  P  R  L   Y F   +  + 
Sbjct: 26  FLTESLPPPLPFDTQGLERAQAGVR--DSSFYRSFSLLGPESREDLYDFYVFCRLVDDLA 83

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D  R  I     L  W   F            +PF +  + I ++  +P+  + +++   
Sbjct: 84  DEPRTDIDVRAHLDAWAWSFAHDFAVPPGWEEAPFFLRTVGIAKKRKIPSSLYGEIVRGM 143

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             D     I D      Y +R +  +  +   I   +            G A  +  ++ 
Sbjct: 144 QDDLTRVRIPDTAALLRYCYRAAGAVGRICVPIFGGDL-DRLGPYADLLGEAFQLTNILR 202

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            L     R ++Y P D +   G+  +  L+G   + +   +        +   +ARE + 
Sbjct: 203 DLAQDASRDRIYLPADRMRHFGVTDDDVLAGHLHEGMRSLLTEIWTRSEEDYCRARELLS 262

Query: 245 YILPDVF---PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
               D      A    ++  ++ K  +  GF +         L +   +L     ++
Sbjct: 263 D-PADQRTMIAARAMETVYHAIHKKIRRTGFDVYRRRVGLGPLEKATVLLRLWRARK 318


>gi|163852429|ref|YP_001640472.1| squalene/phytoene synthase [Methylobacterium extorquens PA1]
 gi|163664034|gb|ABY31401.1| Squalene/phytoene synthase [Methylobacterium extorquens PA1]
          Length = 353

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 92/278 (33%), Gaps = 7/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D       +R      + A LL PP  R+S   LY F        D A       +  
Sbjct: 13  AADRSACRAAIRAGSKSFFAASLLLPPSVRVSAYGLYAFCRLSDDAVDEAGGNRAAALA- 71

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              +     +          P    L  ++ ++ +P +    ++E   +D+         
Sbjct: 72  ---RLERRLTAACAGRPDNHPADRALAEVLARHAIPEKLPRALLEGLAWDTQGRRYDTLS 128

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +   YA R++  +  + T+++      A  R     G+A     +   +      G+LY 
Sbjct: 129 ELAAYAARVAGAVGAMMTLVMGVRDGPALARACD-LGVAMQFTNIARDVGEDARAGRLYL 187

Query: 198 PLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           P + L A G+D ++FL+  +    +   +        +   +A   +  +     PA   
Sbjct: 188 PREWLDAAGIDPDAFLAEPRLGPSLQRVVAELLAAADELYARAEPGIAALPLSCRPAIRA 247

Query: 257 VSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             +    + +  + +    V+         +   + ++
Sbjct: 248 AGLIYAEIGRAVEANELDSVTRRARVTGARKAGLLATA 285


>gi|39935895|ref|NP_948171.1| phytoene synthase [Rhodopseudomonas palustris CGA009]
 gi|39649749|emb|CAE28270.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 290

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 6/276 (2%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            +R+ D+DRY A L +PP  R  L  L  F+ E++RVR     P+  ++RLQWW D+   
Sbjct: 17  LVREADFDRYAATLFAPPEKRRPLLALAAFNAEIVRVRSQVSQPLPGEVRLQWWTDLLAG 76

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
           +         +P + EL   + ++ LP +    +IEAH FD YND + D    E +    
Sbjct: 77  TAH--GGAEGNPVAAELTRAIAEHGLPVEPLTRLIEAHIFDLYNDPMPDWTVLEPHLAET 134

Query: 147 SSRLIHLATMILDS---ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
              LI L   +L     +   A   V ++AG+   + +++ +LP    R QLY P D++ 
Sbjct: 135 EGALISLTARVLAQGAAQASDAVEHVARHAGVVVGVARIVARLPYDSARRQLYLPNDVVQ 194

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESV 263
             G D E   SGQ++  +  A+        K+L KA +E+  +   V PAF+ +++    
Sbjct: 195 RHGCDLEQVFSGQSTAALRAALAEVVAEARKHLDKALQEIADLPAAVRPAFLSLALACRD 254

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           L           +     ++L   W +  +S  K F
Sbjct: 255 LDRLAAPERDPFT-PFERSRLATLWTLWRASRSKPF 289


>gi|226940963|ref|YP_002796037.1| phytoene synthase-related protein [Laribacter hongkongensis HLHK9]
 gi|226715890|gb|ACO75028.1| Probable phytoene synthase-related protein [Laribacter
           hongkongensis HLHK9]
          Length = 291

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 84/270 (31%), Gaps = 5/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESST 88
           D   +  +   L P   R +   +Y F      + D     P TR +RL+ ++   +   
Sbjct: 25  DHYENFPVGSWLLPKRVRHATHVIYRFARSADDIADEGDELPETRLLRLREYRTQLDCLA 84

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
            G +     P   +L  +V Q+ LP + F  +++A   D              Y    ++
Sbjct: 85  AGQV--PDMPLFRDLARVVEQHRLPLEPFYHLLDAFEQDVTVTRYATFGDVVSYCRLSAN 142

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +       +          A  +   +  + + + +G++Y P   L   GL 
Sbjct: 143 PVGRLMLHLFGVTDRQSMAM-SDGICTALQLVNFLQDVAVDWQKGRVYLPQSALAQYGLT 201

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            ++   G       + ++       ++L       + +          + +  E +L+  
Sbjct: 202 EDAIARGDTGGLWGVMMRDQVRRARQFLAAGAPLGKRLPGRFGLELRLIILGGERILQKI 261

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                 +             + +  +   +
Sbjct: 262 HASNGDVFRQRPVLRPSDWLYMLWRAVRAR 291


>gi|320006970|gb|ADW01820.1| Phytoene synthase [Streptomyces flavogriseus ATCC 33331]
          Length = 328

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 7/263 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    +         +LA  L P   R ++  LY F      + D      + + R
Sbjct: 16  LRDAYARCRKLNARHGRTYFLATRLLPVERRCAVHALYGFARWADDIVDDLDRGQSPEER 75

Query: 77  LQWWK-DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            +  +    +            P    +     +Y + +  F D + +   D        
Sbjct: 76  DRLLRLLESDLVHGLRTGGGGQPVVRAVADTAGRYAIDHGLFADFLASMRSDLTVTDYPT 135

Query: 136 CKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                 Y    ++ +   +  ++        +       G+A  +   +  +     RG+
Sbjct: 136 YADLRAYMHGSAAVIGLQMLPVLGTVVPREEAAPHAAALGVAFQLTNFLRDVGEDLDRGR 195

Query: 195 LYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
           +Y P D+L A G+DR        +G++  RI  A      +      +A   +  + P V
Sbjct: 196 VYLPADLLAAHGVDRPLLEWSRRTGRHDPRIRNAFVEADAVIRTVYREAEPGIAMLEPRV 255

Query: 251 FPAFIPV-SITESVLKHAQNHGF 272
            P       +   +L       +
Sbjct: 256 RPCIRTAFVLYRGILDAVAADDY 278


>gi|195396579|ref|XP_002056908.1| GJ16634 [Drosophila virilis]
 gi|194146675|gb|EDW62394.1| GJ16634 [Drosophila virilis]
          Length = 346

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 59/284 (20%), Positives = 107/284 (37%), Gaps = 7/284 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQW 79
           + + +  +   DY+ YL  LL P   R +   L  F+ E+ R        P    +RL++
Sbjct: 65  AKYCMGLVEKFDYENYLTTLLLPKELRPAAFALRAFNVEVSRAVGAQLSEPQIAKLRLKF 124

Query: 80  WKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           W D  +   +   + S     P   EL   V    L   Y   ++ A        +    
Sbjct: 125 WYDSIDKCFEPKSSSSYVKDQPVLRELRRTVGTTKLNKLYLRRLVTARERAPNQ-AFETI 183

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++ E YA +  S L+HL   +              + G AQ I  L+  +P    +  + 
Sbjct: 184 RELEDYADQTCSSLLHLLVQLSGIHDIQ-VDHAASHLGKAQGISMLLRAIPHAGRQQAVC 242

Query: 197 FPLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            PL++L   G+ +E  L  Q  D+ +   I   A     +L   R+ +  +   V   F+
Sbjct: 243 VPLEVLVRHGVSQERILRSQRDDKGVEECIFEVASAANAHLKLTRQLLPQMPRLVRKIFL 302

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           P   TE  L+  +   F++   S      + P  +   ++  ++
Sbjct: 303 PAVPTEGYLERLRRARFQLTHPSCIKRDTMLPARLFWKTLFNKY 346


>gi|24641447|ref|NP_572765.1| CG15738 [Drosophila melanogaster]
 gi|74871734|sp|Q9VYS5|U551_DROME RecName: Full=UPF0551 protein CG15738 homolog, mitochondrial;
           Flags: Precursor
 gi|7292716|gb|AAF48113.1| CG15738 [Drosophila melanogaster]
 gi|21429162|gb|AAM50300.1| RE44923p [Drosophila melanogaster]
 gi|220948558|gb|ACL86822.1| CG15738-PA [synthetic construct]
 gi|220957828|gb|ACL91457.1| CG15738-PA [synthetic construct]
          Length = 334

 Score =  162 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 115/303 (37%), Gaps = 12/303 (3%)

Query: 7   TKNTRKEEKIFSRD-----SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           T    +E+K+   D     +   +  +   DY+ YL  LL P   R +   L  F+ E+ 
Sbjct: 34  TNAIPREKKVIEADKNGYGAKHCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVS 93

Query: 62  RVRDTAR-NPITRDMRLQWWKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYF 117
           R     +  P    MRL++W D  +   +     S     P   EL   V    L   Y 
Sbjct: 94  RSVSGHQIEPQIAKMRLKFWHDSIDKCFEPDSQRSYVEDQPVLRELKHTVGSRKLNKVYL 153

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQ 177
             ++ A      + +    ++ E Y  +  S L+ L   +      +A      + G AQ
Sbjct: 154 RRLVTARERPPTH-AFESIRELEEYTEQTFSSLLLLLLEVGGVRDLNA-DHAASHLGKAQ 211

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYL 236
            I  L+  +P+   +     PL++L   G+ +E  +  ++ D+ +   I   A     +L
Sbjct: 212 GIATLLRSIPLAGRQQAPCIPLEVLVLHGVSQERIIRSKSDDKGVEDCIFDVASAANTHL 271

Query: 237 FKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             AR+    + P V   F+    T++ L+  +   F +   S      + P  +   S+ 
Sbjct: 272 KLARQLHDKVPPQVRKIFLSAVATDAYLERLRRANFLLTHKSCVGRDTLLPARLFWKSLL 331

Query: 297 KRF 299
            RF
Sbjct: 332 NRF 334


>gi|295835548|ref|ZP_06822481.1| squalene synthase HpnD [Streptomyces sp. SPB74]
 gi|295825547|gb|EDY46374.2| squalene synthase HpnD [Streptomyces sp. SPB74]
          Length = 316

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 30/283 (10%), Positives = 78/283 (27%), Gaps = 7/283 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +    +          +      L P   R ++S +Y F   +  + D    P  +  R
Sbjct: 15  VNAAYGYCESVTGAEAKNFAYGIRLLPGDKRRAMSAVYAFSRRVDDIGDGTLVPEEKTRR 74

Query: 77  LQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           L   + + E      +AE    P +V L     ++ +P     ++I+    D    +   
Sbjct: 75  LNECRALLERVRAKDVAEDDTDPVAVALADTALRFPVPLGALDELIDGVLMDVQGRAYRT 134

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASL----RVIKYAGIAQFIGQLICQLPIHYH 191
             +   Y   ++  +  L+  +      +             G+A  +  ++  +     
Sbjct: 135 WDELADYCRCVAGAIGRLSLGVFGVRVSARDRVRAPEYANTLGLALQLTNILRDVREDAG 194

Query: 192 RGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            G+ Y P + L   G        +       +  +            +    +  +    
Sbjct: 195 NGRTYLPAEDLDKFGCSAGFGSATLPEGADFAGLVHFEVRRARALFEEGYRLLPMLDRRG 254

Query: 251 FPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                    I   +L   +     ++    +     + +  + 
Sbjct: 255 GACVSAMAGIYHRLLDRIEQDPDAVLRGRVSLPAREKAYVAVR 297


>gi|254776307|ref|ZP_05217823.1| phytoene synthase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 315

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 87/298 (29%), Gaps = 16/298 (5%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR---N 69
           E+ +                   +LA  L  P  R  +  LY F      + D       
Sbjct: 11  EDPLLREGYRRCRELNAAHGRTFFLATRLLAPDQRPPVHALYGFARYADDILDDLDPRVA 70

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           P  R  RLQ   +   S           P    +    R+Y + +Q F D + +   D  
Sbjct: 71  PAVRARRLQRLSERLFSGGAHT----DDPLVAAVTHTARRYRISSQLFADFLASMRMDLT 126

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMI-LDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                D +    Y    +  +      I         +       G A  +   +  +  
Sbjct: 127 VTDYPDREALNRYMRGSAEAIGLQVLPILGTVTPVDEAAPYAAALGRAFQLTNFLRDVDE 186

Query: 189 HYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P D L A G+DRE  +      +   R+  A+     +  +    A   + 
Sbjct: 187 DLARGRVYLPADELAADGVDRELLMWCHEHRRTDPRVRRALIAQHHIARQTYRFATAGIA 246

Query: 245 YILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP---WYMLSSSIKKR 298
            +     P      ++   +L   +   F +  H  T     R       L  S + R
Sbjct: 247 VLQHRSRPCVAAAAALYSEILDCIEKSDFAVFGHRATVGTARRLRVGAVGLIRSWRAR 304


>gi|118467013|ref|YP_883048.1| phytoene synthase [Mycobacterium avium 104]
 gi|118168300|gb|ABK69197.1| phytoene synthase [Mycobacterium avium 104]
          Length = 316

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 87/298 (29%), Gaps = 16/298 (5%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR---N 69
           E+ +                   +LA  L  P  R  +  LY F      + D       
Sbjct: 12  EDPLLREGYRRCRELNAAHGRTFFLATRLLAPDQRPPVHALYGFARYADDILDDLDPRVA 71

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           P  R  RLQ   +   S           P    +    R+Y + +Q F D + +   D  
Sbjct: 72  PAVRARRLQRLSERLFSGGAHT----DDPLVAAVTHTARRYRISSQLFADFLASMRMDLT 127

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMI-LDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                D +    Y    +  +      I         +       G A  +   +  +  
Sbjct: 128 VTDYPDREALNRYMRGSAEAIGLQVLPILGTVTPVDEAAPYAAALGRAFQLTNFLRDVDE 187

Query: 189 HYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P D L A G+DRE  +      +   R+  A+     +  +    A   + 
Sbjct: 188 DLARGRVYLPADELAADGVDRELLMWCHEHRRTDPRVRRALIAQHHIARQTYRFATAGIA 247

Query: 245 YILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP---WYMLSSSIKKR 298
            +     P      ++   +L   +   F +  H  T     R       L  S + R
Sbjct: 248 VLQHRSRPCVAAAAALYSEILDCIEKSDFAVFGHRATVGTARRLRVGAVGLIRSWRAR 305


>gi|254513760|ref|ZP_05125821.1| phytoene synthase [gamma proteobacterium NOR5-3]
 gi|219676003|gb|EED32368.1| phytoene synthase [gamma proteobacterium NOR5-3]
          Length = 339

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 85/269 (31%), Gaps = 8/269 (2%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            +R      +LA  L PP  R ++  LY F  E     D   +       L  ++   ++
Sbjct: 1   MIRTGSKSFFLASHLLPPALRDAVYALYAFCREA---DDAVDDGADPLAELVAFRARLDT 57

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                     +     L  +VR Y LP +    +++   +D  + +  D      Y  R+
Sbjct: 58  VYGSTP--PDNAVDRALARVVRDYALPRELLEALLQGFAWDVQSRAYKDLAGVYGYGVRV 115

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +  +  +  +++        L      G+A  +  +   +      G++Y P+  L  VG
Sbjct: 116 AGSVGVMMALLMGVRD-PGMLARAADLGVAMQLTNIARDVGEDAFAGRVYLPMRWLREVG 174

Query: 207 LDRESF-LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVL 264
           L  ++   + + S  +   +            +A   +  +     P       +   + 
Sbjct: 175 LSPQALVENPEFSPELGSVVARLLSAAECLYARADSGIAGLPARCRPGIYAARKLYAGIG 234

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                 G   VS         +     S+
Sbjct: 235 HELLRRGGDSVSQRTVLPVHRKLLLTASA 263


>gi|158317464|ref|YP_001509972.1| squalene/phytoene synthase [Frankia sp. EAN1pec]
 gi|158112869|gb|ABW15066.1| Squalene/phytoene synthase [Frankia sp. EAN1pec]
          Length = 300

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 85/286 (29%), Gaps = 11/286 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
              +          R+   +      L P   R +LS +Y     L  + D       + 
Sbjct: 9   STVAEAYASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDIGDGDLPDEEKL 68

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L+  +       + L   S  P  V L    R++ +P + F+++ +    D +     
Sbjct: 69  AGLEKVRADV----RVLDINSSDPVMVALADTARRFPVPMEAFIELADGVESDVHGVPYE 124

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYH 191
                  Y   ++  +  L+  I   +  +   R   +    G+A     ++  +     
Sbjct: 125 TFDDMVGYCRLVAGTIGRLSLGIFGVDGSAGDARSAEIADALGVALQQTNILRDVREDLL 184

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQ---NSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            G++Y P   L   G+      +G+     D +   ++  A    ++  +    +  +  
Sbjct: 185 NGRIYLPSTELEKAGVTLVVSPAGRLGGPEDALVDYLRDCAARADEWYTRGLALLGLLDR 244

Query: 249 DVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                      I   + +  +     ++    +     +      S
Sbjct: 245 RSAACCGAMAGIYLRLNRRIRQDPTAVLERRLSLPGWEKAVVAARS 290


>gi|239933100|ref|ZP_04690053.1| phytoene synthase [Streptomyces ghanaensis ATCC 14672]
          Length = 295

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 84/280 (30%), Gaps = 11/280 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            + +         R         +LA  L P   R ++  LY F      + D       
Sbjct: 12  TDPVLREAYDRCRRLNARHGRTYFLATRLLPVERRPAVHALYGFARWADDIVDALGTGAG 71

Query: 73  RDMR---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
              R   L   +   +   +     S  P    L    R+Y +   +F D + A   D  
Sbjct: 72  AARRDAELSALQRELDEGLRD--GGSGEPVVRALADTARRYGIDPGHFADFMAAMRSDLV 129

Query: 130 NDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                       Y    ++ +   +  ++        +       G+A  +   +  +  
Sbjct: 130 VTDYATYADLRRYMHGSAAVIGLQMLPVLGTVVPREEAAPHAAALGVAFQLTNFLRDVGE 189

Query: 189 HYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P D+L A G  R        +G+   RI+ A+K F  L      +A   + 
Sbjct: 190 DLDRGRVYLPADLLAAHGAGRPLLQWSRDTGRRDRRITAALKEFEALTRGVYREAAPGLG 249

Query: 245 YILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQ 283
            + P   P       +   +       G+ +V      + 
Sbjct: 250 MLDPVSRPCIRTAFVLYGGIQDAVARDGYAVVHLHVRWSP 289


>gi|182440621|ref|YP_001828340.1| putative phytoene synthase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178469137|dbj|BAG23657.1| putative phytoene synthase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 342

 Score =  161 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 86/270 (31%), Gaps = 7/270 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +                     +LA  L P   R ++  LY F      + D   +  T 
Sbjct: 13  DPALRAAYTRCRVLNARHGRTYFLATRLLPVDRRPAVHALYGFARRADDIVDDLDSSATP 72

Query: 74  DMRLQWWKDIFESSTKGLIAES-ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             R +   D+      GL       P    L     +Y + +++F D + +   D     
Sbjct: 73  GERARALLDLEARLEAGLRGAPAAEPVIRALADTAGRYAIDHRHFTDFLRSMRSDLTVGG 132

Query: 133 IFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               ++   Y    ++ +   +  ++        +       G+A  +   +  +     
Sbjct: 133 YASYEELGRYMHGSAAVIGLQMLPVLGTVVPREEAAPHAAALGVAFQLTNFLRDVGEDLD 192

Query: 192 RGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           RG+LY P ++L A G DRE F     +G    RI   ++  A         A   +  + 
Sbjct: 193 RGRLYLPTELLAAHGADRERFEWSRNTGVRDSRIREVVRAAAAHNRTVYRAALPGISLLA 252

Query: 248 PDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
           P   P       +   +L   +  G+ ++ 
Sbjct: 253 PVSRPCIRTAFVLYSGILDAIEADGYAVLH 282


>gi|226360251|ref|YP_002778029.1| phytoene synthase [Rhodococcus opacus B4]
 gi|226238736|dbj|BAH49084.1| phytoene synthase [Rhodococcus opacus B4]
          Length = 311

 Score =  161 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 85/297 (28%), Gaps = 20/297 (6%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
               +    +      +      LA  L P   R ++  LY F   +  + D        
Sbjct: 1   MTALADSYRYCGAVTAEHGRTYNLATRLLPERRRAAVHALYGFARTVDDLVDVDPGRTAG 60

Query: 74  D--MRLQWWKDIFESSTKGLIA-------ESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +    L     +   +     A         +       L  V  +D+P+ YF   + + 
Sbjct: 61  ECAAELDRIDAVLRRAFTDRNAVGDTACSREMLRVLPAFLDTVADFDIPHDYFFAFLNSM 120

Query: 125 FFDSYND-----SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFI 179
             D               +   Y +  +  +      +L +    A        G A  +
Sbjct: 121 RMDVPGTAEHRAGYATLTELRTYMYGSAVVIGLQMLPVLGTTGPGA-EPHAAALGEAFQL 179

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKY 235
              +  +     RG++Y P + L A G+D E        G    RI  A+     +    
Sbjct: 180 TNFLRDVGEDLDRGRVYLPAEELAAFGVDTELLVHSRRRGATDPRIVRALAHLIAVTRSV 239

Query: 236 LFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
              A   +  +   V P       +   +L   +  G++++    T  +  R    L
Sbjct: 240 YRDAEPGIAMLDRRVQPGIRTAFVLYSRILDEIERGGYRVLDRRATVPRRNRWATAL 296


>gi|326781295|ref|ZP_08240560.1| Phytoene synthase [Streptomyces cf. griseus XylebKG-1]
 gi|326661628|gb|EGE46474.1| Phytoene synthase [Streptomyces cf. griseus XylebKG-1]
          Length = 342

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 86/270 (31%), Gaps = 7/270 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +                     +LA  L P   R ++  LY F      + D   +  T 
Sbjct: 13  DPALRAAYTRCRVLNARHGRTYFLATRLLPVDRRPAVHALYGFARRADDIVDDLDSTATP 72

Query: 74  DMRLQWWKDIFESSTKGLIAES-ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             R +   D+      GL       P    L     +Y + +++F D + +   D     
Sbjct: 73  GERARALLDLEARLEAGLRGAPAAEPVIRALADTAGRYAIDHRHFTDFLRSMRSDLTVGG 132

Query: 133 IFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               ++   Y    ++ +   +  ++        +       G+A  +   +  +     
Sbjct: 133 YASYEELGRYMHGSAAVIGLQMLPVLGTVVPREEAAPHAAALGVAFQLTNFLRDVGEDLD 192

Query: 192 RGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           RG+LY P ++L A G DRE F     +G    RI   ++  A         A   +  + 
Sbjct: 193 RGRLYLPAELLAAHGADRERFEWSRNTGVRDSRIREVVRAAAAHNRTVYRAALPGISLLA 252

Query: 248 PDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
           P   P       +   +L   +  G+ ++ 
Sbjct: 253 PVSRPCIRTAFVLYSGILDAIEADGYAVLH 282


>gi|117923621|ref|YP_864238.1| squalene/phytoene synthase [Magnetococcus sp. MC-1]
 gi|117607377|gb|ABK42832.1| Squalene/phytoene synthase [Magnetococcus sp. MC-1]
          Length = 294

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 87/277 (31%), Gaps = 7/277 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRL 77
           +D  +  R +R    +  +  LL+P   R  +  +Y +        D++  +P  +  +L
Sbjct: 15  QDFDYCQRVVRANSENFPVGSLLAPARLRPHIHAVYAYARMADDFADSSEGSPKEKLQKL 74

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             W+   E++ +    E+  P    L   ++Q  LP     D++ A   D         +
Sbjct: 75  DDWQRRLEAAQR---GEADHPVFRALAYTMQQMQLPIDPLRDLLMAFRMDITCKHYDTTQ 131

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG-QLY 196
           +   Y    ++ +  +   +         +        A  +      L      G  LY
Sbjct: 132 ELLEYCRYSANPVGRIVLRLAGYRD-ETLMGYADAICTALQLTNHWQDLGEDPWNGRPLY 190

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P + +   G+     L  + S   +  +            +    +  +   +      
Sbjct: 191 LPREEMARFGVKEADILQRRFSAAAAELMMHLIAQTRALYLQGEPLLTKVSWPLNLELGA 250

Query: 257 VSITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                 +VL+  +  G   +    + ++  +   +L 
Sbjct: 251 TWAGGMAVLERIEQLGGNTLRERPSLDKRAKMGCLLR 287


>gi|322435261|ref|YP_004217473.1| Phytoene synthase [Acidobacterium sp. MP5ACTX9]
 gi|321162988|gb|ADW68693.1| Phytoene synthase [Acidobacterium sp. MP5ACTX9]
          Length = 309

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 92/300 (30%), Gaps = 24/300 (8%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRD 74
             +    F     +    + Y +  + P     ++  +Y F      + D    P   R 
Sbjct: 5   NVAEAYAFCRGVAKREAKNFYWSFRVLPKAKSDAMCAVYAFMRRADDIADDETMPVAQRR 64

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---- 130
           + +  W   +    +    +   P  V L    R++ + ++   D++     D       
Sbjct: 65  VVMAEWLAAWRLVRETGAGD--DPVFVALGDAQRRFGIGDELLEDLVRGTSMDLEEGQGA 122

Query: 131 -----------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFI 179
                      +     +    Y + ++S +  +   I       A L   +  G+A  +
Sbjct: 123 AGGAVKLGDGLEGYETFEDLYRYCYLVASVVGLVCIKIFGYRDARAELLAERT-GVAFQL 181

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS----GQNSDRISLAIKIFAELGLKY 235
             ++  +     RG++Y P  +LG   +     ++     +        I   +    +Y
Sbjct: 182 TNILRDVKEDVERGRVYLPQSLLGEFQVSNGDVVALAGGREMRPNDRAMISALSVQAWEY 241

Query: 236 LFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
              ARE +  I  D   A   +  I   +L+        + S   +     +   ++  +
Sbjct: 242 YASARELLPLIDKDSRAALWVLVEIYSRLLQKIDARHGDVFSKRVSVPTGEKMMALVRGA 301


>gi|183984775|ref|YP_001853066.1| phytoene synthase, CrtB [Mycobacterium marinum M]
 gi|1928932|gb|AAB71428.1| phytoene synthase [Mycobacterium marinum]
 gi|183178101|gb|ACC43211.1| phytoene synthase, CrtB [Mycobacterium marinum M]
          Length = 319

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 86/291 (29%), Gaps = 10/291 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    R         +LA  L  P  R  +  LY F      + D+  +P      
Sbjct: 16  LREAYQQSRRINAASGRTFFLATRLLAPDQRPPVHALYGFARYADDILDSF-DPRLDTDT 74

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
                               +P    +    R+Y +    F D +E+   D       D 
Sbjct: 75  RAQRLQQLAQQFFSGADHPDNPVLAAVSHTARRYGIGADLFEDFLESMRMDLTITDYPDR 134

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQL 195
                Y    +  +      IL +   +          G A  +   I  +     R ++
Sbjct: 135 DALNTYMRGSAEAIGLQLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLARNRI 194

Query: 196 YFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           Y P D L A G+DR+  +    + ++  R+  A+    E+  +    A   ++ + P   
Sbjct: 195 YLPADELAAYGVDRDVLMWCHHNQRSDGRVREALAAQHEITRETYRFAAAGIQLLAPRSR 254

Query: 252 PAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM---LSSSIKKR 298
           P     +++   +L   +   F +     T     R       L  + + R
Sbjct: 255 PCVATALTLYSEILDRIEGDDFAVFGRRATVGTARRLRVAGAGLIRAWRAR 305


>gi|153872423|ref|ZP_02001322.1| Squalene/phytoene synthase [Beggiatoa sp. PS]
 gi|152071113|gb|EDN68680.1| Squalene/phytoene synthase [Beggiatoa sp. PS]
          Length = 281

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 100/276 (36%), Gaps = 6/276 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             +    +       Y +  +  P  R  L  ++ F  E+  +    ++     ++LQWW
Sbjct: 4   FQYCQNKVLHEGSSLYYSLHVLSPTQRKILIAIHAFFREINEIPYECQDLSIVQIKLQWW 63

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +     +      E+  P    L   ++ + L   YF + IE              K  E
Sbjct: 64  QHEIAQTFN---GEAHHPICQVLSEAIQ-HHLEENYFQEFIEGVRQHLNVTRYATDKDLE 119

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  +    +  L    +   +  ++L+  +  GIA  +  L+ +L      G+LY P++
Sbjct: 120 TYCKQT-GVVSTLLCTQVLGYQNESTLKYAEQLGIALQLTFLLRELHQDLANGRLYIPIE 178

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSI 259
            L    +  ++  + Q SD +   +         Y  +A + +      +     I   +
Sbjct: 179 DLERFKVTEQALFNYQLSDTVQALLAYQVVRIRAYYHEAFKHLAKEDVFNQRSGVIRAKL 238

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             + L+  +N G+++ +H  +   L + W    ++ 
Sbjct: 239 ALATLQEIENDGYQVFNHRISLTPLRKFWIAWRTNR 274


>gi|291441449|ref|ZP_06580839.1| LOW QUALITY PROTEIN: phytoene synthase [Streptomyces ghanaensis
           ATCC 14672]
 gi|291344344|gb|EFE71300.1| LOW QUALITY PROTEIN: phytoene synthase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 282

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 83/273 (30%), Gaps = 11/273 (4%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            + +         R         +LA  L P   R ++  LY F      + D       
Sbjct: 12  TDPVLREAYDRCRRLNARHGRTYFLATRLLPVERRPAVHALYGFARWADDIVDALGTGAG 71

Query: 73  RDMR---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
              R   L   +   +   +     S  P    L    R+Y +   +F D + A   D  
Sbjct: 72  AARRDAELSALQRELDEGLRD--GGSGEPVVRALADTARRYGIDPGHFADFMAAMRSDLV 129

Query: 130 NDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                       Y    ++ +   +  ++        +       G+A  +   +  +  
Sbjct: 130 VTDYATYADLRRYMHGSAAVIGLQMLPVLGTVVPREEAAPHAAALGVAFQLTNFLRDVGE 189

Query: 189 HYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P D+L A G  R        +G+   RI+ A+K F  L      +A   + 
Sbjct: 190 DLDRGRVYLPADLLAAHGAGRPLLQWSRDTGRRDRRITAALKEFEALTRGVYREAAPGLG 249

Query: 245 YILPDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
            + P   P       +   +       G+ +V 
Sbjct: 250 MLDPVSRPCIRTAFVLYGGIQDAVARDGYAVVH 282


>gi|118616235|ref|YP_904567.1| phytoene synthase, CrtB [Mycobacterium ulcerans Agy99]
 gi|118568345|gb|ABL03096.1| phytoene synthase, CrtB [Mycobacterium ulcerans Agy99]
          Length = 319

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 86/291 (29%), Gaps = 10/291 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    R         +LA  L  P  R  +  LY F      + D+  +P      
Sbjct: 16  LREAYQQSRRINAASGRTFFLATRLLAPDQRPPVHALYGFARYADDILDSF-DPRLDPDT 74

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
                               +P    +    R+Y +    F D +E+   D       D 
Sbjct: 75  RAQRLQQLAQQFFSGADHPDNPVLAAVSHTARRYGIGADLFEDFLESMRMDLSITDYPDR 134

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQL 195
                Y    +  +      IL +   +          G A  +   I  +     R ++
Sbjct: 135 DALNTYMRGSAEAIGLQLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLARNRI 194

Query: 196 YFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           Y P D L A G+DR+  +    + ++  R+  A+    E+  +    A   ++ + P   
Sbjct: 195 YLPADELAAYGVDRDVLMWCHHNQRSDGRVREALAAQHEITRETYRFAAAGIQLLAPRSR 254

Query: 252 PAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM---LSSSIKKR 298
           P     +++   +L   +   F +     T     R       L  + + R
Sbjct: 255 PCVATALTLYSEILDRIEGDDFAVFGRRATVGTARRLRVAGAGLIRAWRAR 305


>gi|134094961|ref|YP_001100036.1| putative terpenoid synthase-related protein [Herminiimonas
           arsenicoxydans]
          Length = 284

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 80/266 (30%), Gaps = 5/266 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
           D   +  +A +L P   R ++  +Y F      V D    +   R   L  +++  +   
Sbjct: 10  DHYENFPVASILLPARLRPAVEIIYAFARSADDVADEGDASAEERLAALTAYENGLDQIA 69

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                   +P   EL  ++  Y LP Q F D++ A   D       D      Y  R ++
Sbjct: 70  A--GQTPDTPLFRELAKVIADYHLPLQPFRDLLSAFKQDVSTTRYADFSLLLDYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +  +     +LR       A  +      + I   + ++Y P + +    + 
Sbjct: 128 PVGTLMLHLYGAANAE-NLRDSDAICSALQLINFWQDVAIDMRKARIYLPQEDMQTFRVG 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
            E     +        ++         L         +   +      V      +L+  
Sbjct: 187 EEHIAGQRIDQAWRNLMQFEISRARSMLISGAPLALRLPGRIGWELRLVVQGGLRILERI 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +   + +  H     +      +  +
Sbjct: 247 EAVDYDVFRHRPKLGKSDWLRLIWRA 272


>gi|225449889|ref|XP_002266769.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 303

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 104/299 (34%), Gaps = 17/299 (5%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
                   + ++ +R+ DY  YL  +  PP    +   +  F+ E  R  D A +P    
Sbjct: 8   STIQAAFSYCVQQVRNYDYHHYLCNIELPPNMWKAAFAIRAFNVETARAMDIASDPRVGL 67

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---D 131
           MRL WW++  +        E   P +  L S+V ++ +   +    +EA   D+     D
Sbjct: 68  MRLLWWQEAIDKIFANKTIE--HPTAQALASVVSEHKISKGWMKRSVEARINDARREVTD 125

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                ++ E YA    S L++           +A      + G A  +  L+  LP H +
Sbjct: 126 MPETIEELERYAEDTVSTLLYTTLQAGGIRSTAA-DHAASHIGKASGLLLLLRSLPYHAN 184

Query: 192 RGQL--YFPLDILGAVGLDRESFLSGQNS----DRISLAIKIFAELGLKYLFKAREEMRY 245
           R +   Y P D+     L        +      + +   +   A +   +L KAR+    
Sbjct: 185 RNRQFPYIPKDLAANHNLLDTQGGRSEIRMDSPEGLCDVVFDMASVANAHLEKARQLAGT 244

Query: 246 ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHS-----HTPNQLVRPWYMLSSSIKKRF 299
           +  +  P  +P    + +L       F +              L     +   S + ++
Sbjct: 245 VPAEALPVLLPAVPAQVILDSLSRVQFNVFDPRMARGILGIPPLWFQLKLKWHSWRGKY 303


>gi|213965275|ref|ZP_03393472.1| phytoene synthase [Corynebacterium amycolatum SK46]
 gi|213952127|gb|EEB63512.1| phytoene synthase [Corynebacterium amycolatum SK46]
          Length = 326

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 83/302 (27%), Gaps = 22/302 (7%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +        +        LA  L  P  + ++  LY +   +    D   +       
Sbjct: 12  LPQSYELCRDIMTSHGRTYSLATRLLAPRQQRAVWSLYAWARIVDDYVDCPADADRSPTH 71

Query: 77  LQWWKDIFESSTK---------GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
           ++                     +  +             R YD+  Q   D + +   D
Sbjct: 72  IEATVTRLSELFHSAVVSGSLDDVHRDRDRAVISAAAKTFRDYDIDPQLSADFVHSMLMD 131

Query: 128 -----SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER---YSASLRVIKYAGIAQFI 179
                 +       +Q + Y +  ++ +      IL +        +    +  G A  +
Sbjct: 132 VPDTSCHIAHFETWEQLDSYMWGSAAVIGLEMMPILGTRTGVSREEATPYAECLGKAFQV 191

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKY 235
              +  +   + RG++Y PL+   A G+  E        GQ +  +  A+  F       
Sbjct: 192 TNFLRDIAEDFRRGRIYLPLNEWEAFGVGTEEIGYCAAMGQTTPAVRQALAYFIARNRAL 251

Query: 236 LFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             +A   +  +      A      +   +L   +   + + +      +  +    L   
Sbjct: 252 YAEATSGVGMLEVPGRQAIRAAEILYSDILGEIERMNYNVFAQRAQVGRARKAKIALPLL 311

Query: 295 IK 296
            +
Sbjct: 312 FR 313


>gi|117928901|ref|YP_873452.1| squalene/phytoene synthase [Acidothermus cellulolyticus 11B]
 gi|117649364|gb|ABK53466.1| Squalene/phytoene synthase [Acidothermus cellulolyticus 11B]
          Length = 303

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 91/274 (33%), Gaps = 8/274 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +         +     +      L PP  R +L+ +Y     +  + D       +   
Sbjct: 9   LATAYAECEHIMVSAARNFSYGIRLLPPGKRQALAAVYALARRIDDIGDGTLPDDEKLRL 68

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L    D    S K +   +  P  + +    R+  +P   F ++IE    D  N      
Sbjct: 69  L----DDVRMSIKRMGEPTDDPVLLAVGDAARRLPIPIDAFFELIEGCELDVRNTRYPTF 124

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++  HY   ++  +  L+  + D   ++ +  +    GIA  +  ++  +     RG++Y
Sbjct: 125 RELTHYCRCVAGSIGRLSLGVFDPADFATAEPLADALGIALQLTNILRDIREDLLRGRVY 184

Query: 197 FPLDILGAVGLDRESFLSGQNSD---RISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
            PLD L A G++      G  +D   R +  I+  A     +  +    +  +       
Sbjct: 185 LPLDELTAAGIEPHLDDRGMVADERGRFAEFIRDQAARAETWYARGFALLPMLDRRSAAC 244

Query: 254 -FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
                 I   +L+    +   ++          +
Sbjct: 245 TAAMAGIYHRLLQRIARNPRAVLQRRVALPAWEK 278


>gi|255082239|ref|XP_002508338.1| predicted protein [Micromonas sp. RCC299]
 gi|226523614|gb|ACO69596.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 106/302 (35%), Gaps = 20/302 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + ++ +R  DY+ YL  L  P  +R++   L  F+ E  +     + P    MR
Sbjct: 66  VRSSFQYCVQRVRQHDYEAYLCTLALPKEHRLTAMALRAFNVETAQALGATKEPHLALMR 125

Query: 77  LQWWKDIFESST-KGLIAESISPFSVELLSIVRQYDLP--------NQYFLDMIEAHFFD 127
           L+WWKD   ++           P ++ L S +R              ++   +++A   D
Sbjct: 126 LRWWKDAVAAAAGDRGATPPPHPVAIALHSALRTSMRDTGGVGARHRRWLNAIVDARIRD 185

Query: 128 SY-NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
           +  +         E YA +  + L++L           A      + G A  I  L+   
Sbjct: 186 AELDTMPPGIPFLEAYADQTHASLLYLILDACGVRNADADHAAA-HLGKAIGIANLLRGT 244

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
           P+H  + + Y P D+    G   E    G+ ++ +  A+   A +   +L  AR     +
Sbjct: 245 PMHSKQRRCYLPADVCAKHGAATEDVYRGRPTESVRDAVHEVASIAKAHLDGARAMAPRL 304

Query: 247 LPD-------VFPAFIPVSITESVLKHAQNHGFKIVSHSHTP--NQLVRPWYMLSSSIKK 297
                          +P   T   L+  +   F +         N +V    +  ++ + 
Sbjct: 305 ARAGVDGGAIARKVLLPAVGTGRYLEALEAKDFDVFHPELVRGANPIVTQGRIAWAAFRG 364

Query: 298 RF 299
            +
Sbjct: 365 TY 366


>gi|193222335|emb|CAL61911.2| putative phytoene synthase CrtB-like [Herminiimonas arsenicoxydans]
          Length = 278

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 80/266 (30%), Gaps = 5/266 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
           D   +  +A +L P   R ++  +Y F      V D    +   R   L  +++  +   
Sbjct: 4   DHYENFPVASILLPARLRPAVEIIYAFARSADDVADEGDASAEERLAALTAYENGLDQIA 63

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                   +P   EL  ++  Y LP Q F D++ A   D       D      Y  R ++
Sbjct: 64  A--GQTPDTPLFRELAKVIADYHLPLQPFRDLLSAFKQDVSTTRYADFSLLLDYCRRSAN 121

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +  +     +LR       A  +      + I   + ++Y P + +    + 
Sbjct: 122 PVGTLMLHLYGAANAE-NLRDSDAICSALQLINFWQDVAIDMRKARIYLPQEDMQTFRVG 180

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
            E     +        ++         L         +   +      V      +L+  
Sbjct: 181 EEHIAGQRIDQAWRNLMQFEISRARSMLISGAPLALRLPGRIGWELRLVVQGGLRILERI 240

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +   + +  H     +      +  +
Sbjct: 241 EAVDYDVFRHRPKLGKSDWLRLIWRA 266


>gi|195446736|ref|XP_002070903.1| GK25500 [Drosophila willistoni]
 gi|194166988|gb|EDW81889.1| GK25500 [Drosophila willistoni]
          Length = 328

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 105/288 (36%), Gaps = 11/288 (3%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT---ARNPITRDMRL 77
           + + +  ++  DY+ YL+ LL P   R +   L  F+ E+ R          P    MRL
Sbjct: 43  ANYCMGLVQKYDYENYLSTLLLPQELRRTAFALRAFNVEVSRAVGGHGQLSEPQLAKMRL 102

Query: 78  QWWKDIFESSTKGLIAES-----ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           ++W D  +   +     S       P   EL   +    L   Y   ++ A        +
Sbjct: 103 KFWYDSIDKCFESASPSSGSYVKDQPVLRELQHTLGMRKLNKIYLRRLVTARERPPSQ-A 161

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               K+ E YA +  S L+HL                  + G AQ I  L+  +P+   +
Sbjct: 162 FESLKELEEYADQTFSALLHLIVEASGVRDMQ-VDHAASHLGKAQGIATLLRAIPLAGRQ 220

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
            Q+  PL++L   G+ +E  L   + D+ +   I   A     +L  AR+    +     
Sbjct: 221 QQICVPLEVLVRHGVSQERILRSASDDKGVEECIFEVASAANTHLKLARQLQPQVPRVAR 280

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             F+    T+  L+  +   F +          + P  +   S+  ++
Sbjct: 281 KIFLTAVATDGYLERLRQANFLLTHPKCLKRDSMLPARLFWKSLFHKY 328


>gi|237746127|ref|ZP_04576607.1| squalene/phytoene synthase [Oxalobacter formigenes HOxBLS]
 gi|229377478|gb|EEO27569.1| squalene/phytoene synthase [Oxalobacter formigenes HOxBLS]
          Length = 285

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 81/270 (30%), Gaps = 5/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
           +   +  +A +L P   R  +  +Y+F      + D    +   R   L ++ D  +   
Sbjct: 17  EHYENFPVASILLPSRLRQPVEVIYHFARSADDIADEGDLSSSERLAALSFYADELDRIG 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +           V L   VR + LP + F +++ A   D              Y    ++
Sbjct: 77  R--GETPRRELFVALGKTVRDFHLPLEPFKNLLFAFRQDISVKRYDAFADLLDYCRCSAN 134

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   + D+               A  +      + + + + ++Y P + + A G+ 
Sbjct: 135 PVGLLMLHLYDAATEENCRM-SDAICTALQLINFWQDVALDWQKDRIYIPQEDMRAFGVT 193

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
            +       S+     +    E   K +         +   +      V      +L+  
Sbjct: 194 PDDIAGANVSENWKALMAFETERTRKLMHSGAPLAEKLPGRIGWELRLVVQGGLRILERI 253

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           ++ GF +               +     ++
Sbjct: 254 ESAGFDVFRKRPVLRGGDWLSIVWRCLKRR 283


>gi|8650418|gb|AAF78202.1|AF218415_4 phytoene synthase [Bradyrhizobium sp. ORS278]
          Length = 335

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 87/281 (30%), Gaps = 12/281 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPITRDMR 76
              +R+       A  L     R S+  LY +      V D            P  +   
Sbjct: 14  EAVIRNGSKSFAAASKLFDSRTRASVHLLYAWCRHCDDVIDGQDLGIRQGVGAPGPQIGT 73

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQ  +D    + +G       P    L  +V+++ +P+ +  ++++    D         
Sbjct: 74  LQMLRDQTAQALEGAPM--RDPVFQGLQRVVQEHAIPHHHVFELLDGFAMDVDGREYETL 131

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y + ++  +  + + I+ +    A+L      GIA  +  +   +      G++Y
Sbjct: 132 SETLDYCYHVAGVVGVMMSAIMGARE-EATLDRAADLGIALQLTNIARDVIEDAQTGRMY 190

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFI 255
            P   L   G+        Q+   +   +    ++  ++   +   +  +     +    
Sbjct: 191 LPQQWLCEAGVPAAEVAEPQHRQAVFRVVARLLDVAEQFYEASEAGIARLPVRCAWAVET 250

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              +   + +     G              +   +  S++ 
Sbjct: 251 ARVVYRQIGREVMKRGPGAWDARIATTGAQKLGAIGRSALT 291


>gi|260798646|ref|XP_002594311.1| hypothetical protein BRAFLDRAFT_65167 [Branchiostoma floridae]
 gi|229279544|gb|EEN50322.1| hypothetical protein BRAFLDRAFT_65167 [Branchiostoma floridae]
          Length = 253

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 22/274 (8%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             +R  DY+ YL  LL P     +   +  F+ EL  VRD+  +     MR+Q+WKD   
Sbjct: 2   DLVRKHDYENYLCVLLLPSTAHQAAFAVRAFNVELALVRDSVTDKNIGKMRMQFWKDTLS 61

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
              +        P + EL                   A   +  +    +    E Y+ +
Sbjct: 62  DIYRERP--PQQPVAQEL-------------------AKIENLDDQPHRNLSALEDYSEQ 100

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
             S +++L   IL  +   A      + G A  I   +   P   +R +++ P+D++   
Sbjct: 101 TVSSVLYLTLEILGIKDVHA-DHAASHIGKAIGICTALRAAPYLANRRRVFLPMDVMMQF 159

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
           G+ +E  + G+   ++   +   A L   +L KAR   + +      AF+P    +S LK
Sbjct: 160 GVSQEDIVRGKQDQKVKDVMYEIASLSHSHLEKARSLKKDVPRKAMSAFLPALSCDSYLK 219

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             Q   F +   S      + P ++L   +++ F
Sbjct: 220 KIQKADFNVFDSSLHQRDTLLPLHLLLQKLRRMF 253


>gi|240171556|ref|ZP_04750215.1| phytoene synthase, CrtB [Mycobacterium kansasii ATCC 12478]
          Length = 320

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 89/280 (31%), Gaps = 7/280 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                    R         +LA  L  P  R  +  LY F      + D+    +  D+R
Sbjct: 16  LREAYRRCRRINAAHGRTFFLATRLLAPDQRPPVHALYGFARHADDILDSLDPDLGMDVR 75

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
            Q  +++ +    G          V +    R+YD+    F D + +   D       + 
Sbjct: 76  AQRLQELSDGFFAGADLT-DHSVLVAVRHTARRYDINTAPFEDFLASMRMDLTITDYPNR 134

Query: 137 KQFEHYAFRISSRLIHLATMI-LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                Y    +  +      I       + +       G A  +   I  +     R ++
Sbjct: 135 DALNDYMRGSAEAIGLQVLPILGAVVPVAEAAPYAAALGRAFQLTNFIRDIDEDLTRNRV 194

Query: 196 YFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           Y P D L   G+DR+  +    +    +R+  A+     +       A + +  + P   
Sbjct: 195 YLPADELAGDGVDRDLLMWCHRNRCTDNRVRNALAAQHAITRNTYRFAADGIAMLAPRSR 254

Query: 252 PAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           P     +++   +L   ++  F++ SH  T  Q  R    
Sbjct: 255 PCVATALTLYSEILDRIEDDDFEVFSHRATVGQARRLRVA 294


>gi|262195441|ref|YP_003266650.1| Phytoene synthase [Haliangium ochraceum DSM 14365]
 gi|262078788|gb|ACY14757.1| Phytoene synthase [Haliangium ochraceum DSM 14365]
          Length = 333

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 83/284 (29%), Gaps = 10/284 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +       R +        LA  + P   R   + +Y +        D    P  +   L
Sbjct: 18  AEAIDLCRRIIATHSKSFALASRVLPAWCRDQAAVVYAWCRRADDAVD-LAPPSEQPQAL 76

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              +    S   G   +           +V +  +P +Y  +++     D         +
Sbjct: 77  ARLRLELRSIYDGAPQD--DIVLAAFQQVVERNAIPFEYPDELLAGMEMDVIGYEYGSME 134

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y +R++S +  + + ++      A LR   + G+A  +  +   +   +  G+LY 
Sbjct: 135 DLLLYCYRVASTVGLMMSHVMGVTHDGA-LRFAAHMGMAMQLTNICRDVAEDWELGRLYI 193

Query: 198 PLDILGAVGLDRESFLSGQNSDR-----ISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           P  +L A G+       G +        I+ A+         Y       +  +      
Sbjct: 194 PDSVLAACGIGDLRRALGSSFPDHARVPITDAVARLLREADDYYRSGDRGLMALSWRCAL 253

Query: 253 AFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                  +  ++        +  +      +   +   +  S+ 
Sbjct: 254 GVRAARKVYAAIGTELARRDYDPLRGRVFVSTWKKLGLLAGSAW 297


>gi|328769034|gb|EGF79079.1| hypothetical protein BATDEDRAFT_90173 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 272

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 109/274 (39%), Gaps = 3/274 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             +R  DY+++L  L +P   R ++  L  F+ E   +RD   +     MR+QWW+D  E
Sbjct: 2   DLVRTHDYEQFLITLFTPEFARQTVWALKAFNVETAIIRDAVTDVNIGSMRIQWWRDAIE 61

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
            + +   +    P  + L   +    L   +F  ++ A   +  +         E Y+  
Sbjct: 62  KTFQ--GSAPNHPVMMALAKSLESTRLSRMWFTKILAAREANLRDTQHTTIADLEAYSEN 119

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
             S LI+L    L     +A      ++G A  I   +   P +  + + Y P +I+   
Sbjct: 120 TMSSLIYLHLEALGVTDVNA-EHAASHSGKAIGITTALRSTPFNISKQRFYLPTEIMAQH 178

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
            +  E      +++ +  A+   A      +  AR   + +     PA +P+ + ++ L 
Sbjct: 179 QVVTEDIFRFGSNEHLLDAVFTIATRANDQILTARSFSKDVPITAIPALLPLILGDNYLT 238

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + Q   F +   S     L   +Y+ + + K ++
Sbjct: 239 NLQKANFNVFDPSLQKKSLFLQFYIWNLARKNKY 272


>gi|195165358|ref|XP_002023506.1| GL20157 [Drosophila persimilis]
 gi|194105611|gb|EDW27654.1| GL20157 [Drosophila persimilis]
          Length = 327

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 109/283 (38%), Gaps = 7/283 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWW 80
            + +  +   DY+ YL+ LL P   R +   L  F+ E+ R     +  P    +RL++W
Sbjct: 47  KYCMGLVEKYDYENYLSTLLLPRELRRAAFALRAFNVEVSRSVSGHQIEPQIAKLRLKFW 106

Query: 81  KDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
            D  +   +    +S     P   EL   V    L   Y   ++ A        +    +
Sbjct: 107 YDSIDKCFELDSQQSYVKDQPVLRELKHAVGTRKLNKIYLRRLVTARERPPNQ-AFESMR 165

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           + E YA +  S L+HL   +  ++          + G AQ I  L+  +P    +  +  
Sbjct: 166 ELEEYAEQAFSSLLHLLVEVSGAKDLQ-VDHAASHLGKAQGIATLLRAIPHAGRQQAVCV 224

Query: 198 PLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           PL++L   G+ +E  L  ++ D+ +   I   A     +L  AR+    +   V   F+ 
Sbjct: 225 PLEVLVRHGVSQERILRSKSDDKGVEECIFEVASAANTHLKLARQLRDQVPRPVRKIFLS 284

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              T+  L+  +   F +          + P  +  +S+  R+
Sbjct: 285 AVATDGYLERLRRADFLLTHKGCVGRDTMLPARLFWNSLLNRY 327


>gi|262196591|ref|YP_003267800.1| squalene synthase HpnC [Haliangium ochraceum DSM 14365]
 gi|262079938|gb|ACY15907.1| squalene synthase HpnC [Haliangium ochraceum DSM 14365]
          Length = 310

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 90/285 (31%), Gaps = 9/285 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +     R   ++  +A    PP  R  +  LY F      V D       R   
Sbjct: 24  LDACYRYCEALARARHHNFPVASRFVPPTLRRHIWALYAFARTADDVADEPSFEGRRASE 83

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W++  E         +  P  V L   +R+++LP   F  +I     D         
Sbjct: 84  LDRWEERLERCY--FGEPADHPVFVALADTIRRFELPITEFAALISGFRTDLEGGRYHTF 141

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++   Y    +  + HL   +       A  R          + +++  +P    RG++Y
Sbjct: 142 RELRSYTALAAEPIGHLFLYLGGYRD-PALHRFADDLCTGLTLAKVLQDIPADLERGRMY 200

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PL+ L   G+  +       S  +   ++           +AR  +  I      A   
Sbjct: 201 LPLEDLRHFGVSEDDLAQRSASPAVGALVRFHVARARSLFERARPLVDLI--GANLAIEM 258

Query: 257 VSI---TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS-SIKK 297
             I      +L   ++ G +++      N   + + +  + + + 
Sbjct: 259 ALIWHGGMRILGKLESAGVRLLERRPALNAADKAYVVGRALAWRG 303


>gi|329114902|ref|ZP_08243658.1| Putative phytoene synthase [Acetobacter pomorum DM001]
 gi|326695799|gb|EGE47484.1| Putative phytoene synthase [Acetobacter pomorum DM001]
          Length = 299

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 99/281 (35%), Gaps = 6/281 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D  +V   ++           + PP+ R  +  +Y F   +  + D       R   L+
Sbjct: 20  ADLAWVESTVKQAGTSFAAGMRILPPMRRYGMYAIYAFCRVVDDIADGLAPLAERTQALE 79

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH-FFDSYNDSIFDCK 137
            W        +  +     P    LL+ +  + L    F  +I+      +      D K
Sbjct: 80  EWHKKIAHLYQDRLETPHEPLERVLLAAIPFFALQQADFDAIIDGMLMDTATPIVAPDEK 139

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             + Y  R+++ +  L+  I        +     + G A  +  ++  LP    RG+LY 
Sbjct: 140 TLDLYCDRVAAAVGRLSVRIFGECSDEGNKVAY-HLGRALQLTNILRDLPEDAARGRLYL 198

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI-LPDVFPAFIP 256
           P D+L    +     +    +  +    KI A     +   A   M+      + PA I 
Sbjct: 199 PSDLLDRFNV-PHDPVKALTAPGLQEVTKIIAARAQDHFTTAFATMKLCRPRTMLPARIM 257

Query: 257 VSITESVLKHAQNHGF--KIVSHSHTPNQLVRPWYMLSSSI 295
            +  E+VLK+ +  G+   ++      + + + + +  S +
Sbjct: 258 GASYETVLKNLRKRGWGPDVLRQRPESSTVGKVYALACSYL 298


>gi|283778671|ref|YP_003369426.1| squalene synthase HpnC [Pirellula staleyi DSM 6068]
 gi|283437124|gb|ADB15566.1| squalene synthase HpnC [Pirellula staleyi DSM 6068]
          Length = 309

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 103/295 (34%), Gaps = 4/295 (1%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           +L++  +   +     +    +  +  R+   +  +  L  P   R   + LY +     
Sbjct: 7   LLRYGPEAPTRGVPTLAESQAYCRQLAREHYENFQVVHLFLPHHLRDHFASLYAYCRWAD 66

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
            + D A+ P      L WW+   ++  +G  A    P  V L + V+   L      D++
Sbjct: 67  DLADEAKTPEEATHLLGWWQQQLDALEQGQNAT--HPVFVALAATVQAKQLSFAPLHDLL 124

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQ 181
            A   D         ++ + Y  R ++ +  L   + D     +   +  +      +  
Sbjct: 125 SAFRQDQQTTRYATWRELDDYCRRSANPVGRLVLELADVRDDVSMA-LSDFVCTGLQLIN 183

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
               L   + RG++Y P + LG   +DRE  L  Q    + + ++       + + +  +
Sbjct: 184 FWQDLRRDFERGRIYLPAEALGGTEIDRERLLDYQTDSDLQMVLEAAVVDARQSIRRGWD 243

Query: 242 EMRYILPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +  +  +      + +    ++    ++  ++ +      ++  +   +  +  
Sbjct: 244 LLPRVPREFRRSIELFIRGGLAICDAVRDANYQPLVRRPVLSKWKKLSLLAITFW 298


>gi|291435807|ref|ZP_06575197.1| phytoene synthase [Streptomyces ghanaensis ATCC 14672]
 gi|291338702|gb|EFE65658.1| phytoene synthase [Streptomyces ghanaensis ATCC 14672]
          Length = 312

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 82/292 (28%), Gaps = 7/292 (2%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           ++             +          +      L P   R ++S LY F   +  + D A
Sbjct: 2   ESEPHTSAPVLAAYRYCEAVTGHQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDIGDGA 61

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                +  RL+  + +      G + E    P +V L      + +P     ++I+    
Sbjct: 62  LADDVKTARLEDTRALLARIRDGAVDEDDTDPVAVALAHAAAHFPIPLGGLDELIDGVRM 121

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFIGQL 182
           D   ++       + Y   ++  +  L+  +  +ER       +       G+A  +  +
Sbjct: 122 DVRGETYETWDDLKAYCRCVAGAIGRLSLGVFGTERGARGAERAPEYADTLGLALQLTNI 181

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           +  +      G+ Y P D L   G        +       +  +            +   
Sbjct: 182 LRDVREDAEGGRTYLPADDLAKFGCSAGFGGPTPPEGSDFAGLMHFEVRRARALFAEGYR 241

Query: 242 EMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            +  +             I   +L   +     ++    +     + +  + 
Sbjct: 242 LLPLLDRRSGACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGHEKAYVAVR 293


>gi|125981603|ref|XP_001354805.1| GA13926 [Drosophila pseudoobscura pseudoobscura]
 gi|54643116|gb|EAL31860.1| GA13926 [Drosophila pseudoobscura pseudoobscura]
          Length = 327

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 109/283 (38%), Gaps = 7/283 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWW 80
            + +  +   DY+ YL+ LL P   R +   L  F+ E+ R     +  P    +RL++W
Sbjct: 47  KYCMGLVEKYDYENYLSTLLLPRELRRAAFALRAFNVEVSRSVSGHQIEPQIAKLRLKFW 106

Query: 81  KDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
            D  +   +    +S     P   EL   V    L   Y   ++ A        +    +
Sbjct: 107 YDSIDKCFELDSQQSYVKDQPVLRELKHAVGTRKLNKIYLRRLVTARERPPNQ-AFESMR 165

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           + E YA +  S L+HL   +  ++          + G AQ I  L+  +P    +  +  
Sbjct: 166 ELEEYAEQAFSSLLHLLVEVSGAKDLQ-VDHAASHLGKAQGIATLLRAIPHAGRQQAVCV 224

Query: 198 PLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           PL++L   G+ +E  L  ++ D+ +   I   A     +L  AR+    +   V   F+ 
Sbjct: 225 PLEVLVRHGVSQERILRSKSDDKGVEECIFEVASAANTHLKLARQLHDQVPRPVRKIFLS 284

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              T+  L+  +   F +          + P  +  +S+  R+
Sbjct: 285 AVATDGYLERLRRADFLLTHKGCVGRDTMLPARLFWNSLLNRY 327


>gi|195043309|ref|XP_001991593.1| GH12743 [Drosophila grimshawi]
 gi|193901351|gb|EDW00218.1| GH12743 [Drosophila grimshawi]
          Length = 339

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 108/285 (37%), Gaps = 7/285 (2%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR-DTARNPITRDMRLQ 78
            + + +  +   DY+ YL+ LL P   R +   L  F+ E+ R        P    +RL+
Sbjct: 57  SAKYCMGLVEKYDYENYLSTLLLPKELRPAAFALRAFNVEISRSVSAQLTEPQIAKLRLK 116

Query: 79  WWKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           +W D  +   +   ++S     P   EL   V    L   Y   ++ A      N +   
Sbjct: 117 FWYDSIDKCFEPESSKSYVKDQPVLRELRRTVGTTKLNKLYLRRLVTARERP-SNQAFET 175

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            ++ E YA +  S L+HL   +   +          + G AQ I  LI  +P    +  +
Sbjct: 176 LRELEDYADQTCSSLLHLLVQLSGVQDLQ-VDHAASHIGKAQGIAMLIRAIPHAGRQQAV 234

Query: 196 YFPLDILGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
             PL+IL   G+ +E  L    N   +   I   A     +L  AR+    +   V   F
Sbjct: 235 CVPLEILMRHGVSQERILRSEHNDKGVEECIFEVASASSTHLKLARQLSPQVPKLVRKIF 294

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +P   T+  L+  +   F +   S      + P  +   ++  ++
Sbjct: 295 LPAVATDGYLERLRRARFLLTHPSCIKRDTMLPARLFWKTLFSKY 339


>gi|195356061|ref|XP_002044500.1| GM13243 [Drosophila sechellia]
 gi|194131802|gb|EDW53736.1| GM13243 [Drosophila sechellia]
          Length = 334

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 64/299 (21%), Positives = 114/299 (38%), Gaps = 12/299 (4%)

Query: 11  RKEEKIFSRD-----SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
            KE+K+   D     +   +  +   DY+ YL  LL P   R +   L  F+ E+ R   
Sbjct: 38  PKEKKVVETDKNGYGAKHCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVS 97

Query: 66  TAR-NPITRDMRLQWWKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMI 121
             +  P    MRL++W D  +   +     S     P   EL   V    L   Y   ++
Sbjct: 98  GHQIEPQIAKMRLKFWHDSIDKCFEPDTQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLV 157

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQ 181
            A      + +    ++ E Y  +  S L+ L   +      +A      + G AQ I  
Sbjct: 158 TARERPPTH-AFESIRELEEYTEQTFSSLLLLLLEVGGVRDLNA-DHAASHLGKAQGIAT 215

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAR 240
           L+  +P+   +     PL++L   G+ +E  +  ++ D+ +   I   A     +L  AR
Sbjct: 216 LLRSIPLAGRQQAPCIPLEVLVLHGVSQERIIRSKSDDKGVEDCIFDVASAANTHLKLAR 275

Query: 241 EEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +    + P V   F+    T++ L+  +   F +   S      + P  +   S+  RF
Sbjct: 276 QLHDKVPPQVGKIFLSAVATDAYLERLRRANFLLTHKSCVGRDTLLPARLFWKSLFNRF 334


>gi|239927465|ref|ZP_04684418.1| squalene/phytoene synthase [Streptomyces ghanaensis ATCC 14672]
          Length = 316

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 33/295 (11%), Positives = 82/295 (27%), Gaps = 7/295 (2%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
              ++             +          +      L P   R ++S LY F   +  + 
Sbjct: 3   RAVESEPHTSAPVLAAYRYCEAVTGHQARNFAYGIRLLPTPKRRAMSALYAFSRRVDDIG 62

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEA 123
           D A     +  RL+  + +      G + E    P +V L      + +P     ++I+ 
Sbjct: 63  DGALADDVKTARLEDTRALLARIRDGAVDEDDTDPVAVALAHAAAHFPIPLGGLDELIDG 122

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER----YSASLRVIKYAGIAQFI 179
              D   ++       + Y   ++  +  L+  +  +ER       +       G+A  +
Sbjct: 123 VRMDVRGETYETWDDLKAYCRCVAGAIGRLSLGVFGTERGARGAERAPEYADTLGLALQL 182

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAIKIFAELGLKYLFK 238
             ++  +      G+ Y P D L   G        +       +  +            +
Sbjct: 183 TNILRDVREDAEGGRTYLPADDLAKFGCSAGFGGPTPPEGSDFAGLMHFEVRRARALFAE 242

Query: 239 AREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
               +  +             I   +L   +     ++    +     + +  + 
Sbjct: 243 GYRLLPLLDRRSGACVAAMAGIYRRLLDRIERDPEAVLRGRVSLPGHEKAYVAVR 297


>gi|194889316|ref|XP_001977059.1| GG18453 [Drosophila erecta]
 gi|190648708|gb|EDV45986.1| GG18453 [Drosophila erecta]
          Length = 334

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/299 (21%), Positives = 112/299 (37%), Gaps = 12/299 (4%)

Query: 11  RKEEKIFSRD-----SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
            KE+K+   D     +   +  +   DY+ YL  LL P   R +   L  F+ E+ R   
Sbjct: 38  PKEKKVVEVDKNGYGAKHCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVS 97

Query: 66  TAR-NPITRDMRLQWWKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMI 121
             +  P    MRL++W D  +   +     S     P   EL   V    L   Y   ++
Sbjct: 98  GHQIEPQIAKMRLKFWHDSIDKCFEQDSQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLV 157

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQ 181
            A      + +    ++ E Y  +  S L+ L   +      +A      + G AQ I  
Sbjct: 158 TARERPPSH-AFESIRELEEYTEQTFSSLLLLLLEVGGVRDLNA-DHAASHLGKAQGIAT 215

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQN-SDRISLAIKIFAELGLKYLFKAR 240
           L+  +P+   +     PL++L   G+ +E  +  ++    +   I   A     +L  AR
Sbjct: 216 LLRSIPLAGRQQAPCIPLEVLVLHGVSQERIIRSKSGDKGVEDCIFDVASAANTHLKLAR 275

Query: 241 EEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +    + P V   F+    T++ L+  +   F +   S      + P  +   S+  RF
Sbjct: 276 QLHDKVPPQVRKIFLSAVATDAYLERLRRANFLLTHKSCVGRDTLLPARLFWKSLFNRF 334


>gi|126347997|emb|CAJ89717.1| putative phytoene synthase [Streptomyces ambofaciens ATCC 23877]
          Length = 343

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 86/280 (30%), Gaps = 16/280 (5%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +                     +LA  L P   R ++  LY F      + D      T
Sbjct: 12  TDPALRAAYTRCRFLNARHGRTYFLATRLLPADRRPAVHALYGFARWADDIVDDMGAEAT 71

Query: 73  R----------DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
                      + +L+                   P  V L     +Y +   +F D + 
Sbjct: 72  TAERAATLSRLEAQLRQALTGARPLEPTGARPVDEPVVVALADTAARYGIDPAHFTDFMA 131

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQ 181
           +   D              Y    ++ +   +  ++      + +       G+A  +  
Sbjct: 132 SMRSDLTVTDYATYDDLRAYMHGSAAVIGLQMLPVLGTVTPRARAAPHAAALGLAFQLTN 191

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLF 237
            +  +     RG++Y P D+L A G+ R+      L+G+   RI+ A++   +L      
Sbjct: 192 FLRDVGEDLDRGRIYLPADLLAAHGVHRDLLLWSRLTGRRDRRITAALRAAEDLTRAVYR 251

Query: 238 KAREEMRYILPDVFPAFI-PVSITESVLKHAQNHGFKIVS 276
           +A   +  + P   P       +  ++L      G+ ++ 
Sbjct: 252 EAAPGLGMLDPVARPCIRTAYVLYRNILDSIAQDGYAVLH 291


>gi|56479328|ref|YP_160917.1| terpenoid synthase-related protein [Aromatoleum aromaticum EbN1]
 gi|56315371|emb|CAI10016.1| probable terpenoid synthase-related protein [Aromatoleum aromaticum
           EbN1]
          Length = 277

 Score =  159 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 89/270 (32%), Gaps = 5/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-MRLQWWKDIFESST 88
           D   +  +A LL P   R  +  +Y F      + D    P      RL  ++   ++  
Sbjct: 4   DHYENFPVASLLLPARLREPVEAIYAFARSADDIADEGDAPAVARLARLNDYRLELDAIG 63

Query: 89  KGLIAESI--SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
           +G        +P    L   +R + LP   F D+++A   D       D  +   Y  R 
Sbjct: 64  RGAPPRDAGLAPMFDRLARNIRTHALPLPLFRDLLDAFSQDVGKTRYADFAELTDYCRRS 123

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           ++ +  L   +  +     +LR+      +  +      + +   + ++Y P D L   G
Sbjct: 124 ANPVGRLLLHLYGAATPD-NLRLSDRICTSLQLINFWQDVAVDRAKRRIYVPQDDLARFG 182

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLK 265
           +      +G+  +R    +    +     + +     R +     +   + V+    +L+
Sbjct: 183 VGEADIDAGRCDERWRALMTFEVQRARATMLEGAPLARRLPGRIGWELRLMVAGGLRILE 242

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             +   + +        +   P     +  
Sbjct: 243 LIEAADYDVFRRRPMLGRTDWPRLAWRALR 272


>gi|115524910|ref|YP_781821.1| phytoene synthase [Rhodopseudomonas palustris BisA53]
 gi|115518857|gb|ABJ06841.1| phytoene synthase [Rhodopseudomonas palustris BisA53]
          Length = 287

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 75/282 (26%), Positives = 119/282 (42%), Gaps = 4/282 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +  + F    +R  D+DRY A L   P  R +L  LY F+ E++RVRD    P+  ++RL
Sbjct: 8   ADAASFCAELVRSHDFDRYAATLFVAPEPRRALLALYAFNVEIVRVRDLVTQPLPGEIRL 67

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           QWW D+   +     A   +P + ELL  +    LP      +IEAH FD YND + D  
Sbjct: 68  QWWSDLLAGTAH--GAAEGNPVAAELLWAIDAQKLPTAPLERLIEAHQFDLYNDPMPDLA 125

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             + Y       LI LA  +L +   S    +  +AG+   I +LI  +P    R QL+ 
Sbjct: 126 ALQDYLDATVGSLIGLAATVLGAPVGS-VAHLAHHAGVGIGIARLIAAMPRDSSRRQLFL 184

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           PL      G   E   +G+ +  +  A+         +L +A   +     +  PA +  
Sbjct: 185 PLQAFTEAGSGLEEAFAGKPTPTLRAALAKLIAEARDHLDQAGALLAEAPAEARPALLAQ 244

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++    L       F         ++L   W +  +S  + F
Sbjct: 245 ALARRDLDQMARPEFDPFVPHPR-SRLAALWTLWRASRARAF 285


>gi|115465898|ref|NP_001056548.1| Os06g0104100 [Oryza sativa Japonica Group]
 gi|24413977|dbj|BAC22228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113594588|dbj|BAF18462.1| Os06g0104100 [Oryza sativa Japonica Group]
 gi|215766729|dbj|BAG98957.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197401|gb|EEC79828.1| hypothetical protein OsI_21284 [Oryza sativa Indica Group]
 gi|222634813|gb|EEE64945.1| hypothetical protein OsJ_19819 [Oryza sativa Japonica Group]
          Length = 302

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 108/295 (36%), Gaps = 13/295 (4%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                  + ++ +R+ DY  YL  L  PP  R +      F+ E  +  D   +P T  M
Sbjct: 10  NLRTALSYCVQQVRNYDYHHYLCLLHLPPAMRKAAFAFRAFNIETAKAMDVVSDPKTGLM 69

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-- 133
           RL WWKD+ +      + E   P +  L S+V ++ +   +    +EA   D+  D    
Sbjct: 70  RLLWWKDVVDKVFANKLVE--HPVAQVLSSVVSEHKISKHWLKRSVEARINDANRDDYAI 127

Query: 134 -FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                + E YA    S ++++       +   A          +  +  L         +
Sbjct: 128 PETISELERYAEDTQSTILYMTLQAGGIQSTIADHAASHIGKASGLLLLLKALPHHVSKQ 187

Query: 193 GQL-YFPLDILGAVGLDRESFLSGQNS--DRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           G++ Y P  I    GL        +    D +  A+   A +   +L KARE    +  +
Sbjct: 188 GRIPYIPASIAEECGLLTREGGRSEVRMGDELPDAVFKVASVADAHLQKARELASSVPAE 247

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
             P  +P    + +L   +   F +     +      + L     ++  S++K++
Sbjct: 248 AIPVLLPGVPAQVLLDSLRRREFNVFDSRLSRGVHGISPLWYQIKLIWHSVRKKY 302


>gi|299136989|ref|ZP_07030172.1| Phytoene synthase [Acidobacterium sp. MP5ACTX8]
 gi|298601504|gb|EFI57659.1| Phytoene synthase [Acidobacterium sp. MP5ACTX8]
          Length = 315

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 88/300 (29%), Gaps = 28/300 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +          +    + Y A  + P     ++  +Y F  +   + D     +     
Sbjct: 6   ITAAYAVCRDIAKREAKNFYYAFRVLPQHKSDAMCAVYAFMRKADDLADDESLSLEARR- 64

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS---- 132
                    +  +   + +  P  + L    +++++P+     ++     D         
Sbjct: 65  -DAMTAWTAAWRESRTSPTNDPVFLALKDTQQRFEIPDDLLEQLVAGTTLDLNPQPEGVT 123

Query: 133 ----------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIA 176
                             +     HY + ++S +  +   I   +   A    I   G+A
Sbjct: 124 TLVVQDHRCFDRTLQVYDNFAALHHYCYLVASVVGLVCIRIFGYKDRRAEQLAIDT-GVA 182

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS----GQNSDRISLAIKIFAELG 232
             +  ++  +     RG++Y   D+L   G+  E  L+      ++      ++ F +  
Sbjct: 183 FQLTNILRDVKEDAERGRIYLSADLLSEHGVTPEHLLAITEGKASNPADIALLRGFEKHA 242

Query: 233 LKYLFKAREEMRYILPDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
                 A E +  + PD   A    V I   +L         +     +     +   +L
Sbjct: 243 QTLYRSADELIPLLDPDSRAAMRVLVRIYRGLLNLIAEEPAAVFRGRVSMPTSRKLGILL 302


>gi|1706139|sp|P54977|CRTB_STRGR RecName: Full=Phytoene synthase
 gi|1220526|gb|AAA91951.1| phytoene synthase [Streptomyces griseus]
 gi|1632835|emb|CAA64851.1| Phytoene synthase [Streptomyces griseus]
          Length = 342

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 87/270 (32%), Gaps = 7/270 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +                     +LA  L P   R ++  LY F      + D    P T 
Sbjct: 13  DPALRAAYTRCRGLNARHGKTYFLATRLLPVDRRPAVHALYGFARWADDIVDDLDTPATP 72

Query: 74  DMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             R +    +      G   A +  P    L     +Y + +++F D + +   D     
Sbjct: 73  GERARALLGLEAQLEAGLRGARAAEPVIRALADTAARYTIDHRHFTDFLSSMRSDLTVGG 132

Query: 133 IFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               ++   Y    ++ +   +  ++        +       G+A  +   +  +     
Sbjct: 133 YASYEELGRYMHGSAAVIGLQMLPVLGTVVAREEAAPHAAALGVAFQLTNFLRDVGEDLD 192

Query: 192 RGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           RG+LY P ++L A G DR+ F     +G    RI+  ++  A         A   +  + 
Sbjct: 193 RGRLYLPTELLAAHGADRDRFEWSRSTGMPDSRITDVLRAAAAHNRAVYRAALPGIAMLA 252

Query: 248 PDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
           P   P       +   +L   +  G+ ++ 
Sbjct: 253 PVSRPCIRTAFVLYSGILDAIEADGYAVLH 282


>gi|188583930|ref|YP_001927375.1| squalene/phytoene synthase [Methylobacterium populi BJ001]
 gi|179347428|gb|ACB82840.1| Squalene/phytoene synthase [Methylobacterium populi BJ001]
          Length = 298

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 2/275 (0%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            +    +   +         +R+ D DRY A L +P  +R  L  L  F   + RVR+ A
Sbjct: 10  TSPEAGQGGLAFAFRHCEELVREGDPDRYFATLFAPAAFRPHLFALAAFSLSIARVREAA 69

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
            NP+  ++RLQWW+D  +   +G +    +P +  L   +    L  Q F+D+I+A  FD
Sbjct: 70  SNPMAGEIRLQWWRDALQGEARGDV--RANPVAAALEDAIVTRRLGRQPFVDLIDARVFD 127

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
            Y+D +      E Y    +S LI L+ ++L             +AG+A  I  L+  LP
Sbjct: 128 LYDDPMPRVNDLEGYCGETASSLIRLSGLVLADGAEPGGAAAAGHAGVAYGITGLLRALP 187

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
            H  +GQ+Y P D+L   G+ RE  +SG+    +         L  ++L         I 
Sbjct: 188 WHARQGQVYLPGDLLRQNGVTREDIVSGRGGPGLVRTCAELRALARRHLAACEAARATIA 247

Query: 248 PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
           P   PAF+P ++ E  L   +  G+  ++      
Sbjct: 248 PAARPAFLPTALVEPYLAAMERSGYDPLNSVIEIP 282


>gi|146343285|ref|YP_001208333.1| phytoene synthase [Bradyrhizobium sp. ORS278]
 gi|146196091|emb|CAL80118.1| Phytoene synthase [Bradyrhizobium sp. ORS278]
          Length = 335

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 87/281 (30%), Gaps = 12/281 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPITRDMR 76
              +R+       A  L     R S+  LY +      V D            P  +   
Sbjct: 14  EAVIRNGSKSFAAASKLFDSRTRASVHLLYAWCRHCDDVIDGQDLGIRQGVGAPGPQIGT 73

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQ  +D    + +G       P    L  +V+++ +P+ +  ++++    D         
Sbjct: 74  LQMLRDQTAQALEGAPM--RDPVFQGLQRVVQEHAIPHHHVFELLDGFAMDVDGREYETL 131

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y + ++  +  + + I+ +    A+L      GIA  +  +   +      G++Y
Sbjct: 132 SETLDYCYHVAGVVGVMMSAIMGARE-EATLDRAADLGIALQLTNIARDVIEDAQAGRMY 190

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFI 255
            P   L   G+        Q+   +   +    ++  ++   +   +  +     +    
Sbjct: 191 LPQQWLCEAGVPAAEVAEPQHRQAVFRVVARLLDVAEQFYEASEAGIARLPVRCAWAVET 250

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              +   + +     G              +   +  S++ 
Sbjct: 251 ARVVYRQIGREVMKRGPGAWDARIATTGAQKLGAIGRSALT 291


>gi|221633143|ref|YP_002522368.1| phytoene synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156461|gb|ACM05588.1| phytoene synthetase [Thermomicrobium roseum DSM 5159]
          Length = 312

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 96/280 (34%), Gaps = 10/280 (3%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIF 84
             L       +LA    P   R  ++ +Y F   L  + DT R +P   +  L  W+   
Sbjct: 20  AILARHGRSFWLASRFLPRETRHDVTTIYAFFRYLDDIADTGRWDPRQAEALLCSWQAWL 79

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
            S     +       +  +  +  +YDLP QY  D+I+    D +   I    +  HY +
Sbjct: 80  VSDFATPVPNPS--LARAVARVYARYDLPTQYARDLIDGLLDDLFPRRIRSLPELYHYCY 137

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           +++  +      +L               GIA  +  +   +     RG+LY P++ L  
Sbjct: 138 QVAGAVGLTLAPLLGVHCRPGQSAAN-ALGIAMQLTNIARDVGEDLRRGRLYLPIEDLTR 196

Query: 205 VGLDRESFLS-----GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVS 258
            G+                 R+   I++      ++  +A      + P V  A I    
Sbjct: 197 FGIQPHELERLASEFRPPDHRLQAVIRLQIMRARQFYRQAVRGYPCLPPRVRLAIIVSAE 256

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  ++L+  + + +  +          +   +L +    R
Sbjct: 257 VYGAILQVIERNHYDTIRLRAVAGYDDKAVALLRAWQMHR 296


>gi|91787894|ref|YP_548846.1| squalene/phytoene synthase [Polaromonas sp. JS666]
 gi|91697119|gb|ABE43948.1| Squalene/phytoene synthase [Polaromonas sp. JS666]
          Length = 296

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 87/270 (32%), Gaps = 4/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQWWKDIFESST 88
           D   +  +A +L PP  R +++ +Y+F      + D    P  TR   L  +     ++ 
Sbjct: 28  DHYENFPVASVLCPPHLRPAIAAIYWFARTADDIADEGDAPPQTRLDDLAAYHADLMATA 87

Query: 89  KG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
            G   +   +     L  ++ Q+ LP     D++ A   D          +   Y  R +
Sbjct: 88  AGLSPSPRWAAVFDRLGPVITQFVLPVHLLADLLSAFEQDVVKQRYASQAELLDYCSRSA 147

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           + +  L   +       +SL++      A  +      L +   RG++Y P D     G+
Sbjct: 148 NPVGRLLLHLYGVHD-ESSLQMSDCICSALQLINFWQDLSVDIPRGRIYLPADAWARHGV 206

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKH 266
                L+  ++   +  I   A+     + K    ++ I          V      +L  
Sbjct: 207 GEAQLLALDSNPGTTNLIADCAQSARAAMLKGSPLVKRIPGRGGWELRMVVQGGLRILDK 266

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            +   F  ++                +   
Sbjct: 267 IEALKFNTLAQRPKLGPWDVVVMGWRALWM 296


>gi|227821946|ref|YP_002825916.1| hypothetical protein NGR_c13830 [Sinorhizobium fredii NGR234]
 gi|227340945|gb|ACP25163.1| hypothetical protein NGR_c13830 [Sinorhizobium fredii NGR234]
          Length = 279

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 111/261 (42%), Positives = 150/261 (57%), Gaps = 4/261 (1%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           LRD D DRYLACLL+P   R SL+ LY F+ E+ R+RD  R P+  ++RLQWW+D+ ES 
Sbjct: 12  LRDTDRDRYLACLLAPREKRHSLACLYAFYAEIARIRDVIREPLPGEIRLQWWRDLLES- 70

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                     P +  LLS + ++ LP     +MI+A  FD Y+D + D    E YA   +
Sbjct: 71  ---RSGGEGHPLAEALLSCIDEHRLPVAVLQNMIDARVFDLYDDPMEDTTALEGYAGETA 127

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           S LI LA++ILD    + S     +AG+AQ I  L+  LPIH  RGQ+YFP D+L A GL
Sbjct: 128 SALIQLASLILDPIDAAKSADAAGHAGVAQTIAGLLLLLPIHSRRGQVYFPADLLRATGL 187

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
           DRE  L G++   I  A++ F  LG  +L KAR  +  I    F AF+PV++ E V   A
Sbjct: 188 DREMLLDGRDDVAIGRAVRAFCGLGRDHLVKARNSLDSISAQNFSAFLPVALAEPVFARA 247

Query: 268 QNHGFKIVSHSHTPNQLVRPW 288
           +  G +I+ HS  P Q  R W
Sbjct: 248 EAAGARILRHSIQPPQWQRQW 268


>gi|312381071|gb|EFR26899.1| hypothetical protein AND_06701 [Anopheles darlingi]
          Length = 310

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 110/286 (38%), Gaps = 8/286 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +      L  +R  D + +L  LL     R S   +  F+ E+ +V +   +     M L
Sbjct: 27  AAAQNLCLDLVRRHDKENFLCTLLLKNPERRSAFAVRAFNVEVAKVSEKVSSSSIGVMPL 86

Query: 78  QWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           ++W D      +   ++    P   EL S V ++ L   +F  +I +    + N      
Sbjct: 87  KFWDDTIAGLYRKNGSKVPEHPVIEELASAVNRHRLSKMHFQRLISS--RLNTNLHFATV 144

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +Q E YA    S +++L   + D+           + G AQ I  L+  +P    R  + 
Sbjct: 145 QQLEDYAEHSVSSVLYLLLEVHDTRSVH-CDHAASHLGKAQGIVNLLRAIPHQTLRNAVP 203

Query: 197 FPLDILGAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEM---RYILPDVFP 252
            P ++L + G+++E  +   +    +       A +  ++L KA+  +     +   V P
Sbjct: 204 VPQELLISHGVNQERMVRNVKEDKAVEEVTFQLASIAHRHLQKAKTLLQDSAKVPRKVQP 263

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            F P    E  L   +   F + S S      + P  +   +++ +
Sbjct: 264 IFYPAVTIERFLDRLRQANFHLSSPSVIRTDALLPLVLYWHNLRGK 309


>gi|42523221|ref|NP_968601.1| phytoene synthase [Bdellovibrio bacteriovorus HD100]
 gi|39575426|emb|CAE79594.1| phytoene synthase [Bdellovibrio bacteriovorus HD100]
          Length = 304

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 93/280 (33%), Gaps = 5/280 (1%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             ++D     ++++       LA L      +++   LY +        D A    T   
Sbjct: 2   TLNQDLELHKQSIQKGSKSFALASLFFSKQQKLAAWKLYSWCRYCDDQIDGAA-VSTAPR 60

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RLQ    +  S  +   A         L  ++  + +P QY LD++     D  N     
Sbjct: 61  RLQELIQLTRSLPQDPAAMPFQ--FRGLRDVLSAHHIPAQYPLDLLRGMEMDVQNRRYQT 118

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            +  E Y + ++  +  +   I+      A    I   G A  +  +   +    + G+ 
Sbjct: 119 LQDLEEYCYCVAGVVGLMMCHIMGVRSDQALRHAI-AMGNAMQLTNICRDIREDANLGRC 177

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAF 254
           Y P + L   G+   +    ++   +    +   +   +   +    +R++     +   
Sbjct: 178 YLPQEWLKQAGMTETTLFLPEHRGSLVTIQERLLQRADELYAEGFAGLRFLSLRSCWAVL 237

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           I   +   + +  +    + ++     +   +   + S++
Sbjct: 238 IAAKVYSYIGELIRRDSDRGLTRRIHVSFWKKIVLIGSTA 277


>gi|289741729|gb|ADD19612.1| phytoene/squalene synthetase [Glossina morsitans morsitans]
          Length = 320

 Score =  158 bits (400), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 103/284 (36%), Gaps = 5/284 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI-TRDMRL 77
             + + +  +   DY+ YL  LL     R     L   + EL +      +      MRL
Sbjct: 39  NAAKYCMALVEKNDYENYLCTLLLEKGQRRHAFALRALNVELAKCGAMISDQQQLIKMRL 98

Query: 78  QWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           Q+W D  +       +  +  P   EL   +    L   Y   ++ A             
Sbjct: 99  QFWSDSIDKCYDYQKSYVADQPVLSELKHTLDSNKLNKVYLKRLVTARDRAPNQ-PFETV 157

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +  E+Y+ +  S L++L   +   +          + G AQ +  L+  +P       L 
Sbjct: 158 QDMENYSEQTYSSLLYLLIELCGVKDLH-VDHAASHLGKAQGVVTLLRAVPYTKRGQTLN 216

Query: 197 FPLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            P ++L   G+  E FL  ++ D+ +   +   A +  ++L KAR     +   +   F+
Sbjct: 217 VPQELLIKNGVSEERFLRHKSDDKGVEDCVFQIAAVAHQHLEKARSLADKVPKLIRKIFL 276

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           P    E  L+  +   F I   S      + P  +   +++ ++
Sbjct: 277 PSVNVERYLERLRAANFNITHKSCLQRDSMLPLALYMHNLRGKY 320


>gi|195480697|ref|XP_002101356.1| GE15675 [Drosophila yakuba]
 gi|194188880|gb|EDX02464.1| GE15675 [Drosophila yakuba]
          Length = 334

 Score =  158 bits (400), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 109/284 (38%), Gaps = 7/284 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
           +   +  +   DY+ YL  LL P   R +   L  F+ E+ R     +  P    MRL++
Sbjct: 53  AKHCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVSGHQIEPQIAKMRLKF 112

Query: 80  WKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           W D  +   +     S     P   EL   V    L   Y   ++ A      + +    
Sbjct: 113 WHDSIDKCFEPDSQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLVTARERPPTH-AFQSI 171

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++ E Y  +  S L+ L   +      +A      + G AQ I  L+  +P+   +    
Sbjct: 172 RELEEYTEQTFSSLLLLLLEVGGVRDLNA-DHAASHLGKAQGIATLLRSIPLAGRQQAPC 230

Query: 197 FPLDILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            PL++L + G+ +E  +  ++ D+ +   I   A     +L  AR+    + P V   F+
Sbjct: 231 IPLEVLVSHGVSQERIIRSKSDDKGVEDCIFDVASAANTHLKLARQLHDKVPPQVRKIFL 290

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               T++ L+  +   F +   S      + P  +   S+  RF
Sbjct: 291 SAVATDAYLERLRRANFLLTHKSCVGRDTLLPARLFWKSLFNRF 334


>gi|190411493|gb|ABQ23179.2| phytoene synthase [Camellia sinensis]
          Length = 329

 Score =  158 bits (400), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 8/213 (3%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
              + S           +     YL  LL  P  R ++  +Y +      + D       
Sbjct: 120 TSSLLSEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHI 179

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L  W+   E   +             L   V ++ +  Q F DMIE    D     
Sbjct: 180 TPTALDRWESRLEDLFR---GRPFDMLDAALSDTVTKFPVDIQPFKDMIEGMRLDLKKSR 236

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLP 187
             +  +   Y + ++  +  ++  ++           +        GIA  +  ++  + 
Sbjct: 237 YKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQATTESVYNAALALGIANQLTNILRDVG 296

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR 220
               RG++Y P D L   GL  E   +G+ +++
Sbjct: 297 EDARRGRVYLPQDELAQAGLSDEDIFAGKVTEK 329


>gi|242091666|ref|XP_002436323.1| hypothetical protein SORBIDRAFT_10g000450 [Sorghum bicolor]
 gi|241914546|gb|EER87690.1| hypothetical protein SORBIDRAFT_10g000450 [Sorghum bicolor]
          Length = 302

 Score =  158 bits (400), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 99/294 (33%), Gaps = 13/294 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +R +R  DY  YL  L  PP  R +      F+ E  +  D   +P T  MR
Sbjct: 11  LQAALSYCVRQVRAYDYHHYLCLLHLPPAMRKAAFTFRAFNVETAKAMDVVSDPRTGLMR 70

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH---FFDSYNDSI 133
           L WWKD  +      + E   P +  L S+V  + +   +    +EA             
Sbjct: 71  LLWWKDAVDKVFANKLVE--HPVAQALSSVVADHKVSKHWLKRSVEARINDANHDEGTIP 128

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               + E YA    S ++++       +   A          +  +  L         +G
Sbjct: 129 ETSTELERYAEDTQSTILYMTLQAGGIQSTVADHAASHIGKASGLLLLLKALPHHVNKQG 188

Query: 194 QL-YFPLDILGAVGLDRESFLSGQN--SDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            + Y P  +    GL        +    +R+  A+   A +   +L KARE    +    
Sbjct: 189 TVPYIPASVAEECGLLTREGGRSEVRMDERLPDAVFKVASVAEAHLHKARELASSVPKKA 248

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
            P  +P    + +L   +   F +     +      + L     +  ++ + ++
Sbjct: 249 IPVLLPAVPAQVLLDTLRRCEFNVFDSRLSRGVHGVSPLWYQLKLNWNAWRNKY 302


>gi|283778670|ref|YP_003369425.1| Squalene/phytoene synthase [Pirellula staleyi DSM 6068]
 gi|283437123|gb|ADB15565.1| Squalene/phytoene synthase [Pirellula staleyi DSM 6068]
          Length = 296

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 4/283 (1%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR 68
           + R              +  R        A  L     R +L  LY        + D++ 
Sbjct: 2   SRRARSSEVDASYQHCGQLARASGSSFVWAFWLVRRDEREALQSLYALARHTDDLADSSA 61

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
               R   +  WK+   +        S  P    +  + +++ +P  Y L +++    D 
Sbjct: 62  TLDERKQAISAWKNEVSA--ALDQGTSAHPILASVADMQQRFAVPRAYLLAIVDGCEQDL 119

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            +D          Y + ++S +  L    +   ++          G+A  +  ++  L  
Sbjct: 120 QHDGYETFDDLRSYCWNVASAVG-LCCGHIWRAQHVDPEGPAADCGLAMQLTNIVRDLVE 178

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
               G+LY P + L    +      + Q + ++   I        +Y   ++     +  
Sbjct: 179 DQKLGRLYLPREELRRFEVTEAMIGARQFTPQLRDLIAFQIARARRYYASSKAFHDLLPR 238

Query: 249 DVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                F    +    +L+       +++        L R   +
Sbjct: 239 HSQGVFRAMHAYYRHLLERIAVDPRQVLEKRVRLTNLDRLSVL 281


>gi|188581086|ref|YP_001924531.1| squalene synthase HpnD [Methylobacterium populi BJ001]
 gi|179344584|gb|ACB79996.1| squalene synthase HpnD [Methylobacterium populi BJ001]
          Length = 283

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 86/262 (32%), Gaps = 7/262 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  L P   R ++  +Y F   +  V D       R   L  W+   ++   G   
Sbjct: 24  SFYTAMRLLPKERREAMYAVYAFCRSVDDVADDGGAREVRAAELDRWRADIDALYAGNPP 83

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYAFRISSRLIH 152
             + P    L   +R++ L  + F  +I+    D+  D +     + + Y  R++S +  
Sbjct: 84  PRVKP----LEEPMRRFGLKREDFQAVIDGMAMDAEEDIVAPSEAKLDLYCDRVASAVGR 139

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I              + G A  +  ++  +     RG+LY P++    +GL   + 
Sbjct: 140 LSVRIFGMPEGDGIRLAW-HQGRALQLTNILRDIDEDAERGRLYLPMEKFHKIGLMNPTP 198

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            +     R+    +  A    ++  +    +          A +  +     L      G
Sbjct: 199 ETALAHPRLGEVCRAVAAEAEEHYRQTWAIIERSPRQATKAARLMAAAYRLYLDAVVKRG 258

Query: 272 FKIVSHSHTPNQLVRPWYMLSS 293
           +        P +L      L  
Sbjct: 259 WAAPRARVKPGKLSLLRVALRH 280


>gi|116696142|ref|YP_841718.1| putative phytoene synthase [Ralstonia eutropha H16]
 gi|113530641|emb|CAJ96988.1| putative phytoene synthase [Ralstonia eutropha H16]
          Length = 305

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 93/264 (35%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             + A  + PP  R ++  +Y F   +  + D       R   L  W+    +   G   
Sbjct: 46  SFHAALRILPPAQRQAMFEIYAFCRAVDDIADGNAPRAERLAALDAWRHDIAACYTGNPP 105

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            ++ P    L + +R +DL  Q FL +I+    D   D    D    + Y  R++S +  
Sbjct: 106 RALQP----LSAQIRAFDLQQQDFLAVIDGMTMDVVQDIRAPDAATLDLYCDRVASAVGR 161

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           LA  +   E       +  + G A  +  ++  +      G+LY P + L A G+  ++ 
Sbjct: 162 LAVRVFGLEEACGIA-LAHHLGRALQLTNILRDIDEDAAIGRLYLPAEALAAAGIGADTP 220

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITESVLKHAQNHG 271
            +      +  A    A     +  +A   M       V    I   +   +L   +  G
Sbjct: 221 QAVVAHPAVGQACAAVAREAQAHYDQAYAIMARCPSRQVRSPRIMAEVYHRILARLRTQG 280

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           ++         +    W +L  +I
Sbjct: 281 WRAPRQRVRLPRAQLLWILLRHAI 304


>gi|300703965|ref|YP_003745567.1| phytoene synthetase [Ralstonia solanacearum CFBP2957]
 gi|299071628|emb|CBJ42952.1| phytoene synthetase [Ralstonia solanacearum CFBP2957]
          Length = 290

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 88/276 (31%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          D Y + L   P  R +   L     EL      A +P     +LQWW+
Sbjct: 18  DYCADKAAPAGSDLYYSVLFLAPERRRATVALEAVRRELEDAVRDASDPAVVQSKLQWWR 77

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P +  L   +  YD+   +  +++     D+  +   D      
Sbjct: 78  QELARLFD---GRPEHPATKALQPHLGAYDIGAVHLGELLAGVEADAMQNRYLDWPNLRR 134

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           +  +++     LA  I        +L   +   +A+ +   I  L       ++Y P+D 
Sbjct: 135 HGDQVAGVAGRLAARI-AGHAQGRTLEFARQLALAEQLVHFIRNLGDDVRHNRVYIPVDE 193

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L    +      + + SD     +   AE       +A   +         PA I   + 
Sbjct: 194 LQRFNVPAADLFNRRYSDGFKALMTFQAERARATHREALTALPAEDRRTQRPALIRGVLA 253

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +L   +  GF++++       L + W    + I+
Sbjct: 254 MRLLDELEADGFQVLTQRTDLTPLRKLWLAWKTQIR 289


>gi|17546371|ref|NP_519773.1| putative phytoene synthase protein [Ralstonia solanacearum GMI1000]
 gi|17428668|emb|CAD15354.1| putative phytoene synthase protein [Ralstonia solanacearum GMI1000]
          Length = 290

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 87/276 (31%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          D Y + L   P  R +   L     EL      A +P     +LQWW+
Sbjct: 18  DYCADKAAPAGSDLYYSVLFLAPERRRATVALEAVRRELEDAVRDASDPAVVQSKLQWWR 77

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P +  L   +  YD+   +  ++      D+  +   D      
Sbjct: 78  QELARLFD---GRPEHPATKALQPHLAAYDIGAVHLGELFAGVEADAMQNRYLDWPNLRR 134

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           +  +++     LA  I        +L   +   +A+ +   I  L       ++Y P+D 
Sbjct: 135 HGDQVAGVAGRLAARI-AGHAQGRTLEFARLLALAEQLVHFIRNLGDDVRNNRVYIPVDE 193

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +      + + SD     +   AE       +A   +         PA I   + 
Sbjct: 194 LQRFNVPAADLFNRRYSDGFKALMGFQAERARATHREALAALPAEDRRAQRPALIRGVLA 253

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +L   +  GF++++       L + W    + ++
Sbjct: 254 MRLLDELEADGFQVLTQRTDLTPLRKLWLAWKTQLR 289


>gi|239978072|ref|ZP_04700596.1| phytoene synthase [Streptomyces albus J1074]
 gi|291449972|ref|ZP_06589362.1| phytoene synthase [Streptomyces albus J1074]
 gi|291352921|gb|EFE79823.1| phytoene synthase [Streptomyces albus J1074]
          Length = 320

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 87/271 (32%), Gaps = 7/271 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +                     +LA  L P   R ++  LY F      + D      T
Sbjct: 12  TDPALRAAYRTCRTLNARHGRTYFLATRLLPVERRPAVHSLYGFARHADDIVDDLGTSAT 71

Query: 73  RDMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
              R      +      G     S  P    L   VR+Y + +++F D + +   D    
Sbjct: 72  TGERAAALDRLDRRLAAGLRTGTSDEPVVHALADTVRRYAIDHRHFHDFMASMRSDLTVT 131

Query: 132 SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
              D      Y    ++ +   +  ++        +       G+A  +   +  +    
Sbjct: 132 DYPDLAALSRYTHGSAAVIGLQMLPVLGTVVPREEAAPYAAGLGVAFQLTNFLRDVGEDL 191

Query: 191 HRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P D+L A G+DR        +G    RI+ A++  A +  +   +A   +  +
Sbjct: 192 DRGRIYLPADLLAAHGVDRALLCWSRATGHRDARITRALREAAAVTREIYHRAAPGIALL 251

Query: 247 LPDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
            P   P       +  ++L      G+  V 
Sbjct: 252 DPVARPCIRTAHILYGAILDAVAADGYAAVH 282


>gi|119898174|ref|YP_933387.1| putative phytoene synthase [Azoarcus sp. BH72]
 gi|119670587|emb|CAL94500.1| putative phytoene synthase [Azoarcus sp. BH72]
          Length = 281

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 91/276 (32%), Gaps = 9/276 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-MRLQWWKDIF---- 84
           +   +  +A LL P   R  +  +Y F      V D    P      RL  ++       
Sbjct: 4   EHYENFPVASLLLPARLREPVEAIYAFARGADDVADEGDAPAVARLARLNDYRLALNAIG 63

Query: 85  --ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             E  T+  +   + P    L   VRQ+ LP Q F D+++A   D       D  +   Y
Sbjct: 64  RGEDITRSAVDGELRPLFERLARNVRQFGLPLQLFRDLLDAFSQDVGKTRYADFDELLDY 123

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             R ++ +  L   +  +     +LR+      +  +      + + + + ++Y P D L
Sbjct: 124 CRRSANPVGRLLLHLYGAATPD-NLRMSDAVCSSLQLINFWQDVAVDWRKARIYLPQDSL 182

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE- 261
              G+      +    +R    +    E   + +       R +   +      V +   
Sbjct: 183 SRFGVTEADIAAACCDERWRALLAFEVERARRLMLSGAPLARRLPGRLGWELRLVVLGGL 242

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +L+  +  G+ +        +       L S   +
Sbjct: 243 RILERIEAAGYDVFRARPVLGKRDWAMLALRSLRFR 278


>gi|331696595|ref|YP_004332834.1| Phytoene synthase [Pseudonocardia dioxanivorans CB1190]
 gi|326951284|gb|AEA24981.1| Phytoene synthase [Pseudonocardia dioxanivorans CB1190]
          Length = 336

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 88/294 (29%), Gaps = 14/294 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                              +LA  L P   R ++  LY F      + D   +      R
Sbjct: 19  LRTAYAACRELNARHGRTYFLATRLLPARRRPAVHALYGFARYADEIVDDLSDGRPAAER 78

Query: 77  LQWWKDIFESSTKGLIAESISP-------FSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                 + +     L  ++ +P           +    R++D+ +++F D I +   D++
Sbjct: 79  AAALDALADDLAAALGGDAPTPPGDARAAVLAAVADTARRHDIEHRHFADFIASMRMDTH 138

Query: 130 NDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                       Y    ++ +   +  ++      + +       G+A  +   +  +  
Sbjct: 139 VTGYARYADLARYMHGSAAVIGLQMLPVLGTVTDRAQAEPHAAALGVAFQLTNFLRDVGD 198

Query: 189 HYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              RG++Y P D L A G+DR+  L          R+  A+            +A   + 
Sbjct: 199 DLDRGRVYLPADELAAHGVDRDLLLWCRRRRARDPRVRAALAHLVARTRGVYRRAAPGIP 258

Query: 245 YILPDVFPAF-IPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIK 296
            + P          ++   +L    +  +  ++          R        ++
Sbjct: 259 MLEPVSRACIECAAALYGGILDRIADADYDAVLHRRVRVPTARRIAVAGPGLLR 312


>gi|282862496|ref|ZP_06271558.1| Phytoene synthase [Streptomyces sp. ACTE]
 gi|282562835|gb|EFB68375.1| Phytoene synthase [Streptomyces sp. ACTE]
          Length = 329

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 7/289 (2%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R  E           R         +LA  L P   R ++  LY F      + D    
Sbjct: 9   ARITEPALRAAYDRCRRLNARHGRTYFLATRLLPVERRCAVHALYGFARWADDIVDDLDR 68

Query: 70  PITRDMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                 R +  + + +    G        P    +     +Y + +  F D + +   D 
Sbjct: 69  TRPPAERDRLLRLLEDDLALGLRTGGGDEPVVRAVADTAGRYAIDHGLFADFMASMRSDL 128

Query: 129 YNDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
                        Y    ++ +   +  ++        +       G+A  +   +  + 
Sbjct: 129 SVTDYPTYAHLRAYMHGSAAVIGLQMLPVLGTVVDRREAAPHAAALGVAFQLTNFLRDVG 188

Query: 188 IHYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
               RG++Y P D+L A G+ R        +G+   R+  A+     L      +A   +
Sbjct: 189 EDLDRGRVYLPADLLAAHGVARPLLEWSRRTGRRDRRVRAALVEAEALTRAVYREAEPGI 248

Query: 244 RYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             + P V P      ++   +L       + ++       +  R     
Sbjct: 249 AMLEPRVRPCIRTAFTLYGGILDAIAADDYAVLHRRAVVPRGRRAVTAA 297


>gi|217979363|ref|YP_002363510.1| squalene synthase HpnD [Methylocella silvestris BL2]
 gi|217504739|gb|ACK52148.1| squalene synthase HpnD [Methylocella silvestris BL2]
          Length = 294

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 6/272 (2%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
                +      Y A  + P   R ++  +Y F   +  + D       R   L  W+  
Sbjct: 24  CAAAAQSRGSSFYFAMRMLPQAQRDAMFEIYSFCRAVDDIADDGGPLAPRRAALAKWRRD 83

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHY 142
            ++   G     ++P    L+  V  + L    F  +I+    D   D    D    + Y
Sbjct: 84  IDALYAGSPPPEMAP---GLIDAVATFRLERDDFHAVIDGMEMDLAGDIRAPDLATLDLY 140

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             R++S +  L+  I    +         + G A  +  ++  L      G+LY P + L
Sbjct: 141 CDRVASAVGRLSVKIFGVPQAEGRPLAF-HLGRALQLTNILRDLDEDAAIGRLYLPRETL 199

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITE 261
            + G+   +  +      +  A          +  +AR  M            I     E
Sbjct: 200 ASAGVSFATPEAALADPGLDAACAPVILRAKDHFHEARAIMARCPRQSIRAPMIMADAYE 259

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +L    + GF         ++      +L  
Sbjct: 260 PILAGLAHRGFAPPRKRIRTSKWRVLVAILRH 291


>gi|187928974|ref|YP_001899461.1| squalene synthase HpnD [Ralstonia pickettii 12J]
 gi|187725864|gb|ACD27029.1| squalene synthase HpnD [Ralstonia pickettii 12J]
          Length = 277

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 91/277 (32%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          D Y + L   P  R +   L     EL      A +P     +LQWW+
Sbjct: 5   NYCADKAAPPGSDVYYSVLFLAPERRRATIALEAVRRELEDAVRDASDPAVVQSKLQWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                  +        P +  L   + +YD+   +  +++     D+  +   D      
Sbjct: 65  QELARLFE---GRPEHPAAKALQPHLARYDIGAVHLGELLAGVEADAMQNRYLDWPNLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           +  +++     L   I   + ++ +L   +   +A+ +   +  L       ++Y P+D 
Sbjct: 122 HGDQVAGVAGRLTARIA-GQTHARTLEFARLMALAEQLVHFVRNLGEDVRHNRVYIPVDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +      + + ++     +   AE       +A   +          A I   + 
Sbjct: 181 LQRFNVPAADLFNRRYAEGFKPLMAFQAERARATYKEALAALPAEDRRAQRSALIRGVLA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
             ++   +  GF++++       L + W    + I+ 
Sbjct: 241 MRLIDEVEADGFQVLTQRTDLTPLRKLWLAWKTQIRG 277


>gi|296122491|ref|YP_003630269.1| Phytoene synthase [Planctomyces limnophilus DSM 3776]
 gi|296014831|gb|ADG68070.1| Phytoene synthase [Planctomyces limnophilus DSM 3776]
          Length = 303

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 98/285 (34%), Gaps = 5/285 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDM 75
            +    +     R    +   +        R ++  LY F      + D    +   R  
Sbjct: 19  VAESFQWAEEVTRRSRSNFRWSFFTLDRQRRQAMEALYSFMRLTDDLGDNEGLSISERTE 78

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           +L  W+ + +++  G       P    L+  + +Y +P  Y  D+I     D +   +  
Sbjct: 79  QLIAWRKMLDAALAGESQP--HPLMPALVDTISRYQIPACYLHDVITGVEMDLHPVQLKS 136

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
             + E YA+ ++  +      I   +   A  R +   G A     ++  +      G++
Sbjct: 137 WAELEKYAYHVAGAVGLCCIHIWGFQEDQAQARAL-ACGRAMQYTNILRDVNSDLALGRV 195

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P ++L       +       +     A++ FAE+      +A   +  + P   P   
Sbjct: 196 YLPEELLRQHRYSLDDLRQRAYTAPFVSAMREFAEVTRANYREAALLVSELEPPGRPILR 255

Query: 256 -PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +   +++L+  ++  F++           + W++  + +   F
Sbjct: 256 VMLDTYQTLLERIEHAEFRVFEQRIRVPVWQKLWFVGRTFLPGGF 300


>gi|241663161|ref|YP_002981521.1| squalene synthase HpnD [Ralstonia pickettii 12D]
 gi|309782638|ref|ZP_07677360.1| squalene synthase HpnD [Ralstonia sp. 5_7_47FAA]
 gi|240865188|gb|ACS62849.1| squalene synthase HpnD [Ralstonia pickettii 12D]
 gi|308918613|gb|EFP64288.1| squalene synthase HpnD [Ralstonia sp. 5_7_47FAA]
          Length = 277

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 91/276 (32%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          D Y + L   P  R +   L     EL      A +P     +LQWW+
Sbjct: 5   DYCADKAAPPGSDVYYSVLFLAPERRRATIALEAVRRELEDAVRDASDPAVVQSKLQWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                  +        P +  L   + +YD+   +  +++     D+  +   D      
Sbjct: 65  QELARLFE---GRPEHPAAKALQPHLARYDIGAVHLGELLAGVEADAMQNRYLDWPNLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           +  +++     L   I   + ++ +L   +   +A+ +   +  L       ++Y P+D 
Sbjct: 122 HGDQVAGVAGRLTARIA-GQTHARTLEFARLMALAEQLVHFVRNLGEDVRHNRVYIPVDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +      + + ++     +   AE       +A   +          A I   + 
Sbjct: 181 LQRFNVPAADLFNRRYAEGFKPLMTFQAERARATYKEALAALPAEDRRAQRSALIRGVLA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +L   +  GF++++       L + W    + I+
Sbjct: 241 MRLLDEVEADGFQVLTQRTDLTPLRKLWLAWKTQIR 276


>gi|207724187|ref|YP_002254585.1| phytoene synthase protein [Ralstonia solanacearum MolK2]
 gi|206589397|emb|CAQ36359.1| phytoene synthase protein [Ralstonia solanacearum MolK2]
          Length = 290

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 88/276 (31%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          D Y + L   P  R +   L     EL      A +P     +LQWW+
Sbjct: 18  DYCADKAAPAGSDLYYSVLFLAPERRRATVALEAVRRELEDAVRDATDPAVVQSKLQWWR 77

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P +  L   +  YD+   +  +++     D+  +   D      
Sbjct: 78  QELARLFD---GRPEHPATKALQPHLAAYDIGAVHLGELLAGVEADAMQNRYLDWPNLRR 134

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           +  +++     LA  I        +L   +   +A+ +   I  L       ++Y P+D 
Sbjct: 135 HGDQVAGVAGRLAARI-AGHAQGRTLEFARLLALAEQLVHFIRNLGDDVRHNRVYIPVDE 193

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L    +      + + SD     +   AE       +A   +         PA I   + 
Sbjct: 194 LQRFNVPAADLFNRRYSDGFKALMTFQAERARTTHREALTALPAEDRRTQRPALIRGVLA 253

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +L   +  GF++++       L + W    + I+
Sbjct: 254 MRLLDELEADGFQVLTQRTDLTPLRKLWLAWKTQIR 289


>gi|126362785|gb|ABO10427.1| phytoene synthase [Brevundimonas bacteroides]
          Length = 312

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 90/275 (32%), Gaps = 10/275 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-----ARNPITRDMRLQWWKDIF 84
                   A  L  P  R     LY +        D          ++ + + +    ++
Sbjct: 15  KGSKSFRSASRLFDPKVREDAWLLYAWCRACDDEIDGQDHGFGHEELSPEEQKRRLDRLY 74

Query: 85  ESSTKGLIAES-ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
           + + + +  E    P       +  ++ LP ++ +D+I+    D  +           Y 
Sbjct: 75  DLTRRAMTGEPMSDPVFAAFQRVAIRHRLPERWAMDLIDGFAMDVEHRDYRTIDDVLAYC 134

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           + ++  +  +   ++        LR  +  G+A  +  +   +      G++Y P D L 
Sbjct: 135 WHVAGVVGVMMARVMGVTDPE-VLRRAQDLGLAFQLTNISRDVIEDAEGGRVYLPADWLV 193

Query: 204 AVGLDR--ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-IT 260
             GL+   E+     N  ++         +   Y   AR+ +R +      A      + 
Sbjct: 194 EAGLEPTAEAVADPANRAKVHAVTTRLLAVAEPYYDSARDGLRGLPFRSAMAIAAARGVY 253

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             + +  +  G  +     +  +L++ W     ++
Sbjct: 254 REIGRKVRRRGPGVWRQRVSVGRLMKLWLFGRGAL 288


>gi|209885372|ref|YP_002289229.1| squalene/phytoene synthase [Oligotropha carboxidovorans OM5]
 gi|209873568|gb|ACI93364.1| squalene/phytoene synthase [Oligotropha carboxidovorans OM5]
          Length = 288

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 4/290 (1%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             +     + ++ +  + +RD D++RY   L      R  L  L  F+ EL R+RD    
Sbjct: 1   MSESHSKAADNAAYCAQLVRDHDFERYATTLFVSQHLRRPLLALAAFNVELSRIRDHVSQ 60

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           P+T ++RLQWW+D+ +   +G +  S  P + EL++ V +YDLP +    + +A  FD Y
Sbjct: 61  PLTGEIRLQWWRDLIDDVARGSVEAS--PVAAELMAAVAEYDLPRRDLSRLADARVFDLY 118

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +D +     FE Y    + RL  L+  I       A    + +AG+AQ I + I  L +H
Sbjct: 119 DDPMPSLAVFERYCDDTAGRLFALSAQI-LGAAPDAVADAVHHAGVAQGIAEAIENLSLH 177

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             R QLY P D+L   G       +G+ + +++ AI   A +  ++L KA   +R    +
Sbjct: 178 AARKQLYLPQDVLAEAGAMEADIFAGRPTPQLTAAIGGLAVVAREHLGKALFLLREQKGE 237

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              AF+P+++    L H         +   + ++L   W M   +  + F
Sbjct: 238 AARAFLPLAVVRRALSHDSLATGNPFT-PQSISRLRMLWTMWRVTKSEAF 286


>gi|299133448|ref|ZP_07026642.1| squalene synthase HpnD [Afipia sp. 1NLS2]
 gi|298591284|gb|EFI51485.1| squalene synthase HpnD [Afipia sp. 1NLS2]
          Length = 275

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 91/264 (34%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++ ++Y F  ++  + D+      R   L  W+   ++   G   
Sbjct: 16  SFYAAMRILPREQREAMFYIYSFCRKVDDIADSDGPRAERLEALAQWRRDIDALYTGNPP 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD-SYNDSIFDCKQFEHYAFRISSRLIH 152
             ++P+       V+++ L  + F+ +I+    D        D    + Y  R++S +  
Sbjct: 76  PRVAPYLPA----VKRFGLKREDFIAIIDGMEMDVPAEIRAPDEATLDLYCDRVASAVGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  +           +    G A  +  ++  +      G+LY P ++L A G+     
Sbjct: 132 LSVRVFGLSEADGIA-LSHNLGRALQLTNILRDIDEDAGIGRLYLPRELLDAAGIVSSDP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
                   +        E    Y  KA E M       V    I     + +LK     G
Sbjct: 191 QVVAADPNVPKVCAPIVERVKVYFAKADEIMARYPRSNVRAPRIMSKYYQEILKRLLARG 250

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F     S   ++  +   +L  ++
Sbjct: 251 FAPPRQSVKLSKAAKMSILLRYAV 274


>gi|209964367|ref|YP_002297282.1| squalene [Rhodospirillum centenum SW]
 gi|209957833|gb|ACI98469.1| squalene [Rhodospirillum centenum SW]
          Length = 281

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/284 (19%), Positives = 106/284 (37%), Gaps = 3/284 (1%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +   D  +    +R  D DR+L  L +P   R  L  LY  + E+ + R+         +
Sbjct: 1   MAPSDLSYCADQVRRFDNDRFLTALFAPADRREDLFALYACNLEVAKTREVVSEATLGLI 60

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RLQWW+D  E   +G +          L   + ++ L +     +IEA   D        
Sbjct: 61  RLQWWRDALEGIGRGEV--RRHEVVEALAGTIGRHGLDSARLDRLIEAREADLEEGPPAS 118

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 YA   ++ L  LA  +L   + +A       A     +  ++  +P H    +L
Sbjct: 119 LVALTAYAEATAAPLAQLALEVLGVRQDAAMEAARHAATAWA-LTGVLRAVPFHASHQRL 177

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
             P D++   G+   +  +G     ++  +++ AE   +   +AR   R +     PA +
Sbjct: 178 LLPADLMACHGVPETALFAGTPPAGLAAVVQVVAEEASRRQAQARALRRQVPAAALPALL 237

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              + +  L      GF   +        +R   +  +++  R+
Sbjct: 238 TGPLCDLYLTALAKAGFDPFAPRMQMPHPLRQLRLGWAALTGRW 281


>gi|289642101|ref|ZP_06474253.1| squalene synthase HpnC [Frankia symbiont of Datisca glomerata]
 gi|289508064|gb|EFD29011.1| squalene synthase HpnC [Frankia symbiont of Datisca glomerata]
          Length = 346

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 78/274 (28%), Gaps = 8/274 (2%)

Query: 25  LRNLRDIDYDRYLACLL-SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
              LR    + +    L  P   R  L  +Y F   +  + D A         L   +  
Sbjct: 42  QDVLRAASAENFPVSPLILPARQRQHLFAIYGFARLVDDIGDEASGDRLAL--LDALEAD 99

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            +   +        P    L   VR+  L  + F  ++ A+  D              Y 
Sbjct: 100 LD---RIWGGTPTLPVIQALAPTVRECGLAPEPFRRLVAANRQDQLVTRYDTFDDLLRYC 156

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
              +  + H+   +             +    A  I + +  +   Y  G++Y P + L 
Sbjct: 157 TLSADPVGHMVLGVFGVSTPDRVELSNR-VCTALQIVEHVQDVAEDYAAGRIYLPREDLD 215

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITES 262
           + G+             +   I        + L +    +  +   +       V    +
Sbjct: 216 SFGVHERDLAHPSAGPAVRELIAFQVLRARRILDEGTPLVGLVEGRLRLLLAGFVGGGRA 275

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            L   +  G  ++  + T  +     Y L+ ++ 
Sbjct: 276 ALDAVERAGCDVLGGAPTAPKPRIVRYALAVALT 309


>gi|170740725|ref|YP_001769380.1| squalene/phytoene synthase [Methylobacterium sp. 4-46]
 gi|168194999|gb|ACA16946.1| Squalene/phytoene synthase [Methylobacterium sp. 4-46]
          Length = 289

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 73/281 (25%), Positives = 127/281 (45%), Gaps = 2/281 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                      +R+ D DRY A L +P   R  L  L+ F+ E+ RVRD   NP+  ++R
Sbjct: 10  LDWAYAHCEALVREGDPDRYFAALFAPAGKRPHLFALHAFNLEVARVRDAVSNPMPGELR 69

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  +   +G +     P +  L   + ++ LP Q  + +++A  FD Y+D +   
Sbjct: 70  LQWWRDALQGEARGDV--RAHPVAAALDDTLVRHRLPRQPLVALVDARVFDLYDDPMPST 127

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S L  LA+++L             +AG+A  +  L+  LP H  RGQ+Y
Sbjct: 128 HDLEGYCGETASSLFRLASIVLADGGEPGGAAAAGHAGVAYAVAGLLRALPWHARRGQVY 187

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P DIL   G+ RE  ++G+    +  A      L  +++    +E   +     PA +P
Sbjct: 188 LPADILARHGVTREDIVAGRGGPGLKGACADLRALARRHVAACAKERGDLAAAGAPALLP 247

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           V++ E  L+  +  G++ +       +  R   +  ++   
Sbjct: 248 VALVEPYLRAMERPGYEPLRSVIEIPRWRRVLRLWRAARAG 288


>gi|299822735|ref|ZP_07054621.1| possible phytoene synthase [Listeria grayi DSM 20601]
 gi|299816264|gb|EFI83502.1| possible phytoene synthase [Listeria grayi DSM 20601]
          Length = 282

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 87/274 (31%), Gaps = 7/274 (2%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITR 73
           K    D  +  + ++    + Y A          ++  +Y F  ++  + D A      +
Sbjct: 3   KELKADFDYCRKVIKTNSTNFYRAFSKMDTEKANAVFAIYTFCRKIDDITDDAELTIAEK 62

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
             RL  W++I ++                L + +  Y +      + I     D   +  
Sbjct: 63  KARLLMWENILKNRAAYTEIAG----VQALDATISAYRIDVDLLQEQIVGQRMDLDFEQP 118

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D ++F  Y + ++  L  +   I+  +      +     GIA  I  ++  +   Y + 
Sbjct: 119 SDMERFLEYCYFVAGNLGLILLPIISVQDQQVWRKACVELGIAMQITNILRDIGEDYQQY 178

Query: 194 -QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-F 251
            ++Y P  I+   G       + + +       +  AE   +       E   +   V  
Sbjct: 179 KRIYLPKSIMTRFGYSEAEIAAQEINGNFVALWEHLAEEADQRYAFFERERHNLEQTVEV 238

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                      +L   +N+ +   +     ++L 
Sbjct: 239 SVLFAARSYNEILNSVRNNDYDCFTKRGYVSKLK 272


>gi|152980355|ref|YP_001353219.1| squalene/phytoene synthase protein [Janthinobacterium sp.
           Marseille]
 gi|151280432|gb|ABR88842.1| squalene/phytoene synthase protein [Janthinobacterium sp.
           Marseille]
          Length = 291

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 83/270 (30%), Gaps = 5/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESST 88
           D   +  +A +L P   R ++  +Y F      + D     P  R   L  ++   +   
Sbjct: 23  DHYENFPVASILLPARLRPAVEVIYAFARSADDLADEGNATPDERLAALAAYEQQLDQIE 82

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
            G  A++      +L  ++ +Y LP Q F D++ A   D              Y  R ++
Sbjct: 83  AGTTADTA--LFRKLAQVIAEYHLPLQPFRDLLSAFKQDVVTTRYAGFNDLLDYCRRSAN 140

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +      + +LR       A  +      + I + + ++Y P   L    + 
Sbjct: 141 PVGTLMLHLY-GAANAGNLRESDDICSALQLINFWQDVAIDWQKERIYLPQQDLQKFNIA 199

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
            +              ++   +     L         +   +      V      +L+  
Sbjct: 200 EQQIAQQTVDAAWRQLMQFEVQRARAMLLSGAPLALRLPGRIGWELRLVVQGGLRILECL 259

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +  G+ +        +      +L +   K
Sbjct: 260 EASGYDMFRQRPKLGKSDWLLLLLRAIRMK 289


>gi|262277465|ref|ZP_06055258.1| phytoene synthase [alpha proteobacterium HIMB114]
 gi|262224568|gb|EEY75027.1| phytoene synthase [alpha proteobacterium HIMB114]
          Length = 286

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 87/274 (31%), Gaps = 13/274 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              L+      Y A LL         + LY F  +L    D   +  T+   L       
Sbjct: 7   QDILKKHAKSFYFAGLLLDKKTLNDAAILYAFCRQLDDAADE-EDQQTKLNDL------- 58

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
              T           + E   + R Y L  ++  D+I     D       +  +   Y++
Sbjct: 59  --ITDYKKEAPEDLINKEFKKLQRTYQLDQKFIDDLIIGVSSDIDFKQPKNLSELIKYSY 116

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           +++  +  L   IL +  ++A    +   GI   I  +   +      G++Y P D+L  
Sbjct: 117 QVAGTVGGLMAKILGANDHNAWKFAVD-LGIGMQITNISRDIKEDAKNGRVYIPEDMLPN 175

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESV 263
                    +G N   I    K   E+   Y     E + YI     F   I   +  S+
Sbjct: 176 -NFKPTDITNGSNDGLIFNLTKQLLEIAESYYQSGFEGIYYIPKKNKFSILIAGVLYNSI 234

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            K    +    +      N   +   ++++   K
Sbjct: 235 GKKIIKNKTLFLKQRIYLNTFEKLLILMANVFTK 268


>gi|158288987|ref|XP_310791.4| AGAP000326-PA [Anopheles gambiae str. PEST]
 gi|157018836|gb|EAA06250.5| AGAP000326-PA [Anopheles gambiae str. PEST]
          Length = 278

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 108/281 (38%), Gaps = 8/281 (2%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
                R+ D + +L  LL     R S   +  F+ E+ +V +         M L++W++ 
Sbjct: 1   CFAVGRNHDKENFLCTLLLKNPERRSALAVRAFNVEVAKVSEKVSAGNVGVMPLKFWENT 60

Query: 84  FESSTKGLIAE----SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
             +  +    +       P   EL   VR++ L  +Y   ++ A    +        KQ 
Sbjct: 61  VTTLYRPPDGDARAVPDHPVIRELHRAVREHKLSKRYLQRLVAARANSNL--HFVTVKQL 118

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E YA +  + +++L   +  +           + G AQ I  L+  +P    R  +  P 
Sbjct: 119 EDYAEQAVASVLYLLLEVHGTRNVH-CDHAASHLGKAQGIVNLLRSIPYQTRRSAVPIPQ 177

Query: 200 DILGAVGLDRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
           ++L A G+++E  +  +  D+ +       A +  ++L  A+  +R +   V P F+P  
Sbjct: 178 ELLMAHGVNQERMVRNRPDDKGVEEVTFALASVAFRHLETAKGLIRTVPRPVRPIFLPCV 237

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             E  L   +   F +   S      + P  +    ++  +
Sbjct: 238 SIERYLHRLRLASFHLTDASVMRTDSLLPLVLYWRKLRGNY 278


>gi|326504750|dbj|BAK06666.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 302

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 102/294 (34%), Gaps = 13/294 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + ++ +R  DY  YL  L  PP  R +      F+ E  +  D   +P    MR
Sbjct: 11  LRTALSYCVQQVRSYDYHNYLCLLHLPPAMRKAAFTFRAFNVETAKAMDVVSDPRKGLMR 70

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS---I 133
           L WWKD+ +        E   P ++ L S++ +  +   +    +EA   D   D     
Sbjct: 71  LLWWKDVVDKVYANKTVE--HPVALALSSLLSEQKVSKHWLKRSLEARINDGNRDDDAIP 128

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            +  + E YA    S ++++       +   A          +  +  L         +G
Sbjct: 129 ENIPELERYAEDTQSTILYMTLQAGGIQSTIADHAASHIGKASGLLLLLKALPHHVSKQG 188

Query: 194 QL-YFPLDILGAVGLDRESFLSGQNS--DRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
           ++ Y P  +    GL        +    D +  A+   A +   +L KARE    +  + 
Sbjct: 189 KIPYIPASVAEECGLLAREGGRTEVRMGDALPDAVFKVASVAEAHLQKARELAASVPAEA 248

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
            P  +P    + +L   +   F +     +      + L     +   + + ++
Sbjct: 249 VPVLLPAVPAQVLLDSLRRREFNVFDSRLSSGVHGISPLWYQLKLNWHAWRNKY 302


>gi|302383388|ref|YP_003819211.1| phytoene synthase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194016|gb|ADL01588.1| Phytoene synthase [Brevundimonas subvibrioides ATCC 15264]
          Length = 313

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 92/289 (31%), Gaps = 10/289 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-----ARNP 70
                      ++         A  L  P  R     LY +        D          
Sbjct: 2   TADAVLAASKASITKGSKSFRSASRLFDPAVREDAWLLYAWCRACDDEIDGQDHGFGHEE 61

Query: 71  ITRDMRLQWWKDIFESSTKGLIAES-ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           ++ + + +    +++ + + +  E    P       +  ++ LP ++ +DMI+    D  
Sbjct: 62  LSVEEQQRRLARLYDMTRRAMTGEPMSDPTFAAFQRVAIRHRLPERWAMDMIDGFAMDVE 121

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +           Y + ++  +  +   ++        LR  +  G+A  +  +   +   
Sbjct: 122 HRDYVTLDDVMAYCWHVAGVVGVMMARVMGVTDPE-VLRRAQDLGLAFQLTNISRDVIED 180

Query: 190 YHRGQLYFPLDILGAVGLDR--ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
              G++Y P D L   GL+   E+     N   +    +    +   Y   AR+ +R + 
Sbjct: 181 AQGGRVYLPADWLFEAGLEPTAEAVADPANRQTVHAVTRRLLAVAEPYYDSARDGLRGLP 240

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                A      +   + +  +  G  +     + ++ ++ W     ++
Sbjct: 241 FRSSMAIAAARGVYREIGRKVRRGGPGVWRSRVSVSRPMKLWLFARGAL 289


>gi|170090105|ref|XP_001876275.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649535|gb|EDR13777.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 312

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/305 (19%), Positives = 108/305 (35%), Gaps = 23/305 (7%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +  + +    +R  DY+ +L     P   +     +  F  EL  V+D   N +   MR
Sbjct: 9   LANPAAYCRDFVRKHDYESFLVSHFYPKAAQDGYFAIKAFSVELATVQDNVSNAMIGQMR 68

Query: 77  LQWWKDIFESSTKGLI--------AESISPFSVELLSIVRQYDLPNQYFLDMIE------ 122
           + +W+D  ++     I             P  + L    ++ +LP  +   MI+      
Sbjct: 69  MVFWRDALKAIADVRIYALNEKRGRPPKHPIVLALYEASQRANLPAYHLRRMIDARPLTF 128

Query: 123 -AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQ 181
                + +  S         +A   SS +++   + L S   SA      + G AQ I  
Sbjct: 129 GGQDAELHTPSHLTIDSVTSHAESTSSTVLY-LLLSLLSVGSSALSHAASHLGAAQTIST 187

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAR 240
           L+  LP H  +G++  P +I    G+ +E     G  +  I  A+  FA L   +L  AR
Sbjct: 188 LLRALPYHAKKGEMIIPAEITAKHGVKQEEVFRRGPEAHGIEEAVFEFATLANDHLITAR 247

Query: 241 EEMRY------ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           + ++       +     P F+      + L   +   F               W +  S 
Sbjct: 248 DMLKEEGMGGSVPARAMPVFLSGVTVANYLGRLEKANFNAFQSRLVVRDWKLAWQIWRSY 307

Query: 295 IKKRF 299
             +RF
Sbjct: 308 YIRRF 312


>gi|111220883|ref|YP_711677.1| putative phytoene synthase [Frankia alni ACN14a]
 gi|111148415|emb|CAJ60087.1| Putative phytoene synthase [Frankia alni ACN14a]
          Length = 299

 Score =  155 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 89/285 (31%), Gaps = 11/285 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             +          ++   +      L PP  R +LS +Y     L  + D    P  +  
Sbjct: 9   TVAEAYAACEALTKEAARNFSYGIRLLPPEKRGALSAVYALARHLDDIGDGDLPPEEKLA 68

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L   +    +        S  P  V L    R++ +P + F+++ +    D +  +   
Sbjct: 69  GLAQVRAEVNNLGA----GSSDPMYVALDDAARRFPIPLEAFIELADGVESDVHGTTYDT 124

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYHR 192
                 Y   ++  +  L+  I  +E+ ++      +    G+A     ++  +      
Sbjct: 125 FDDMVGYCRLVAGTIGRLSLGIFGTEQAASDRSAPAIADALGVALQQTNILRDVREDLLG 184

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF---AELGLKYLFKAREEMRYILPD 249
           G++Y P   L A G++     SG+     +  +      A+   ++  +    +  +   
Sbjct: 185 GRIYLPAQELKAAGIELAVDASGRLGGPPTALLGYLRSSAQRAEEWYDRGMVLLDLLDRR 244

Query: 250 VFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                     I   + +  +N    ++          +      S
Sbjct: 245 SAACCGAMAGIYLRLNRRIKNEPAAVLDRRLALPGWQKAVVAARS 289


>gi|300311902|ref|YP_003775994.1| phytoene synthase [Herbaspirillum seropedicae SmR1]
 gi|300074687|gb|ADJ64086.1| phytoene synthase protein [Herbaspirillum seropedicae SmR1]
          Length = 269

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 84/266 (31%), Gaps = 5/266 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESST 88
           D   +  +A LL P   R +++ +Y F      + D     P  R   L  ++   +   
Sbjct: 4   DHYENFPVASLLLPARLRPAVTDIYAFARSADDIADEGDAAPEERLAGLHAYEAQLDLIA 63

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +       +P    L   + +++LP Q   D++ A   D              Y  R ++
Sbjct: 64  RQQPC--ATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSAN 121

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +  +     +LR       A  +      + I + + ++Y PL+ L   G+ 
Sbjct: 122 PVGTLMLHLYGAAS-EENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
            E   +G+   R    ++   E     +       + +   +      V      +L   
Sbjct: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILARI 240

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +     +  H     +         +
Sbjct: 241 ERVQGDVFGHRPKLGKADWLAVGGRA 266


>gi|189202724|ref|XP_001937698.1| phytoene synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984797|gb|EDU50285.1| phytoene synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 583

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 88/290 (30%), Gaps = 21/290 (7%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
           +  L+      YLA    P   R  L  LY F      + D A +       +   +   
Sbjct: 290 VNRLKRKSRSFYLASATFPGPLRADLLLLYSFCRVADDLVDNASDADEARAWIAKMRKFL 349

Query: 85  ESST---------KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS--- 132
            +              I +   P +   L  +    L  Q   D++     D        
Sbjct: 350 NNVYSDKLPQSVVHSQICDDFPPSTQSALLQLPATKLSPQPLEDLLHGFEMDLAFQQGPI 409

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK--------YAGIAQFIGQLIC 184
           I   +    Y+ R++  +  +   ++     S      K          G+A     +  
Sbjct: 410 IRTMEDLRVYSERVAGTVAQMCIQLIFYWYPSTLDTEEKNVIVAAGNSMGVALQYVNIAR 469

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            + +    G++Y PL+ L   GL  +  L   N  +I    K           KA++ + 
Sbjct: 470 DIEVDAQIGRVYLPLNWLSEAGLSYDDVLKKPNQAQIQTLRKHLLNHAFSVYEKAKDSIE 529

Query: 245 YILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +  +   P  + V     + +  ++  +++ +   T  +  R      +
Sbjct: 530 RLPIEARGPIRVAVESYMEIGRILRSEQYQVKAGRATVPKSRRIMVAWRT 579


>gi|293606271|ref|ZP_06688633.1| phytoene/squalene synthetase [Achromobacter piechaudii ATCC 43553]
 gi|292815336|gb|EFF74455.1| phytoene/squalene synthetase [Achromobacter piechaudii ATCC 43553]
          Length = 276

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 78/272 (28%), Gaps = 9/272 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-RLQWWKDIFESST 88
           D   +  +A LL P   R +++ +Y F      + D         + +L  ++       
Sbjct: 4   DHYENFPVASLLLPRRLRGAVTDIYRFARAADDIADEGSASDEERLSQLAAFRTELHRIG 63

Query: 89  KGLIAESI------SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                         +     L   + ++ LP   F D++ A   D       D      Y
Sbjct: 64  AEPGNTPAPGLPPLADIFTPLAQTIARHQLPITPFYDLLSAFEQDITVKRYEDYATLADY 123

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             R ++ +  L   + D+                  +      + + +H+ ++Y P + L
Sbjct: 124 CTRSANPVGRLMLHLFDASSPRDVAE-SDAICTGLQLVNFWQDVRVDWHKHRVYLPQEDL 182

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE- 261
              G+  E   + + +      +    E     L       R +   +      V     
Sbjct: 183 RRHGVTEEDLAACRLTPAWRELMAFQVERTRALLHFGAPLARRLPGRIGLELRLVVQGGL 242

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            VL+  +   + +  +            +  S
Sbjct: 243 RVLERIEASSYDVFMNRPELGAKDWAIMLWRS 274


>gi|189218459|ref|YP_001939100.1| Squalene/phytoene synthase [Methylacidiphilum infernorum V4]
 gi|189185317|gb|ACD82502.1| Squalene/phytoene synthase [Methylacidiphilum infernorum V4]
          Length = 305

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 86/293 (29%), Gaps = 19/293 (6%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-------- 67
             ++  L+  +      Y+ +   LL        +  +Y F        D          
Sbjct: 2   NIAQAYLYCKKI--ASHYENFPVGLLVGKELAPHVHAIYAFARVADDFADEGYFLKENER 59

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
            N   R  RL               ++  +P  V L   ++++DLP + F D+++A   D
Sbjct: 60  ENEQKRKERLDKLDRWQSYLFDPSRSDE-NPLFVALHDTIQKFDLPLKLFTDLLDAFRQD 118

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
              +   + ++   Y  + ++ +  L   +                  A  +      + 
Sbjct: 119 VLKNRYENFEEVLDYCKKSANPIGRLVLHLHRQTS-DFQFSCSDCICTALQLANFWQDIS 177

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           I   + ++Y P   +    +        + S      +    +       K +  +  + 
Sbjct: 178 IDLKKNRIYLPRQEMEQFKVSETDLFKRKFSPSFRDLLSFQVQRTADLFEKGKALIGTL- 236

Query: 248 PDVFPAFIPVSI----TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              FP  + +++     + +L+     G+  +      N    P     +   
Sbjct: 237 --SFPLKLEIALTWHGGKRILEKIVKGGYNTLESRPKINYKDAPLLFSRALRT 287


>gi|328700871|ref|XP_003241409.1| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial-like
           isoform 2 [Acyrthosiphon pisum]
          Length = 274

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 96/267 (35%), Gaps = 3/267 (1%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
              D++ YL  LL     R +   +  F+ E+  ++D   +    +MR ++W+       
Sbjct: 9   EKHDFENYLCTLLLHKSIRRTGFAVRAFNIEVATLQDQISDMKIGEMRFKFWESSLTEIY 68

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           K  I     P  +EL +  +   L   Y   +I +      N S+   +  E YA    S
Sbjct: 69  KNKI--PKHPVLIELYTATKTQKLSIIYLKRLISSRENYMLNSSLKTIEDLETYAENSVS 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            + +L    +  +        + + G  Q I  +I  +P +   G++  P DIL    + 
Sbjct: 127 PVYYLFLEAMGIKDMK-VDHAVSHLGKCQGIINIIRGIPYNTKSGRISIPQDILLKYKVS 185

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQ 268
            E+ +   +   +  AI   A     +L KA+   +     +    +P       L+  +
Sbjct: 186 YENIIRNSSEQNVRDAIYELASRANSHLMKAKSLEKEGNKRIKSVCLPFVPLHLYLEKLR 245

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              F +          + P  +L   +
Sbjct: 246 LADFNVFDKKLQERNNLLPMKLLWRKM 272


>gi|268317156|ref|YP_003290875.1| Squalene/phytoene synthase [Rhodothermus marinus DSM 4252]
 gi|262334690|gb|ACY48487.1| Squalene/phytoene synthase [Rhodothermus marinus DSM 4252]
          Length = 575

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 91/277 (32%), Gaps = 11/277 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR---NPITRDMRLQWWKDIFES 86
                   A  L P  +R  +  LY F      + D A     P     RL  W+     
Sbjct: 291 AHARSFSFAARLFPKDFRREVVLLYGFCRLTDDLVDGASTQVAPELLQKRLDRWQRQVRM 350

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
           + +G    S  P+   L+   RQ  LP +    +++    D     +   ++ + YA+R+
Sbjct: 351 AYEGRP--SGLPWLDRLMQRSRQAGLPWEVVQALLDGVRQDIGPVRVASYEELDRYAYRV 408

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
            S +      ++        L   +  G A     ++  +     R +LY P D + A G
Sbjct: 409 GSTVGVWMCYLMGVR-MPRLLARAEALGRAMQYTNIVRDVGEDLQRDRLYLPADRMAAYG 467

Query: 207 LDRESFLS----GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITE 261
           LD    L     G         ++   +   +    A E +  + P V  A      +  
Sbjct: 468 LDLADLLRMQQTGVLDPSYVALLEELMQQAERDYEAAWEAIPALPPRVRGAIAVAAEVYR 527

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +    + + +  ++         +    +++  + R
Sbjct: 528 GIHAVLRQNHYDNLTRRAYTTLPEKIGLSVAALRRLR 564


>gi|83745906|ref|ZP_00942963.1| Phytoene synthase [Ralstonia solanacearum UW551]
 gi|207743042|ref|YP_002259434.1| phytoene synthase protein [Ralstonia solanacearum IPO1609]
 gi|83727596|gb|EAP74717.1| Phytoene synthase [Ralstonia solanacearum UW551]
 gi|206594439|emb|CAQ61366.1| phytoene synthase protein [Ralstonia solanacearum IPO1609]
          Length = 290

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 88/276 (31%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          D Y + L   P  R +   L     EL      A +P     +LQWW+
Sbjct: 18  DYCADKAAPAGSDLYYSVLFLAPERRRATVALEAVRRELEDAARDATDPAVVQSKLQWWR 77

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P +  L   +  YD+   +  +++     D+  +   D      
Sbjct: 78  QELARLFD---GRPEHPATKALQPHLAAYDIGAVHLGELLAGVEADAMQNRYLDWPNLRR 134

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           +  +++     LA  I        +L   +   +A+ +   I  L       ++Y P+D 
Sbjct: 135 HGDQVAGVAGRLAARI-AGHAQGRTLEFARLLALAEQLVHFIRNLGDDVRHNRVYIPVDE 193

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L    +      + + SD     +   AE       +A   +         PA I   + 
Sbjct: 194 LQRFNVPAADLFNRRYSDGFKALMTFQAERARATHREALTALPAEDRRTQRPALIRGVLA 253

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +L   +  GF++++       L + W    + I+
Sbjct: 254 MRLLDELEADGFQVLTQRTDLTPLRKLWLAWKTQIR 289


>gi|94313076|ref|YP_586285.1| phytoene synthase [Cupriavidus metallidurans CH34]
 gi|93356928|gb|ABF11016.1| phytoene synthase [Cupriavidus metallidurans CH34]
          Length = 282

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             + A  + P   R ++  +Y F   +  + D       R   L+ W+    +   G   
Sbjct: 23  SFHAAMRILPASQRQAMFEIYAFCRAVDDIADGDTQHADRLAALEQWRADIAACYAGQAP 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYAFRISSRLIH 152
            ++ P    L   ++ ++L  Q F D+I+    D     +  D    + Y  R++S +  
Sbjct: 83  AALRP----LDEQIKAFNLQQQDFSDVIDGMIMDVVATIVAPDAATLDTYCDRVASAVGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           LA  +   +       +  + G A  +  ++  L      G+LY P + L A G+     
Sbjct: 139 LAVRVFGLDEAPGIA-LAHHLGRALQLTNILRDLDEDAEIGRLYLPAEALAAAGIPVGKP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
               +   I+      A     +   +   M       V    I   +   +L      G
Sbjct: 198 YDVIHHPAIAEVCTGIARDAQAHYDASAAIMARCPARVVRSPRIMSDVYHGILTRLLARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           ++         +    W +L  +I
Sbjct: 258 WQPPRARVRVPKAKLVWILLRHAI 281


>gi|302878942|ref|YP_003847506.1| squalene synthase HpnC [Gallionella capsiferriformans ES-2]
 gi|302581731|gb|ADL55742.1| squalene synthase HpnC [Gallionella capsiferriformans ES-2]
          Length = 274

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 79/267 (29%), Gaps = 5/267 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMRLQWWKDIFESST 88
           +   +  +A +L P   R  ++ +Y+F      + D    P   R  +L  ++   +   
Sbjct: 4   EHYENFPVASILMPKRLRRPVAAIYHFARAADDIADEGDLPDAERLAQLAAFRSELDRM- 62

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                  ++P    L + V+ Y LP Q   D+++A   D       +      Y  R ++
Sbjct: 63  -VQGEPPLTPLFQNLAATVQAYQLPLQPHYDLLDAFSQDVVTKRYDNYAALADYCRRSAN 121

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +   E    +L        +  +      +      G++Y P D +   G+ 
Sbjct: 122 PVGILMLHLY-GEATPVNLAYSDQICTSLQLINFWQDVAKDMAIGRIYLPRDEMARFGVT 180

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
                     D     +K   +     + +       +   +      +      +L   
Sbjct: 181 ETQIAQHICDDNWRALMKFQIDRARSLMLQGAPLGSILTGRIGLEMRMIIAGGLRILDKL 240

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSS 294
               + +               +  S+
Sbjct: 241 DAVNYDMFRRRPVLGPFDWVIMLAKSA 267


>gi|225024443|ref|ZP_03713635.1| hypothetical protein EIKCOROL_01318 [Eikenella corrodens ATCC
           23834]
 gi|224942824|gb|EEG24033.1| hypothetical protein EIKCOROL_01318 [Eikenella corrodens ATCC
           23834]
          Length = 271

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 84/270 (31%), Gaps = 6/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +R L   +   +    
Sbjct: 5   HYENFPVGSLVLPHRLRRPVHAIYAFARTADDIADEGDLPNEERLRQLDNLRTELDRLAA 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S       L    +R ++LP + F  ++ A   D          +   YA R ++
Sbjct: 65  DQTTHSE--LMQRLEREAIRPFNLPLEPFYHLLSAFSQDVVKTRYQHFGELVDYARRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +        SL        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PIGRLLLHLY-GHTDPLSLAQSDGICTALQLINFWQDVAVDWQKGRVYLPQDDLEKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +    +   K L       + +   +      + +  +S+L+  
Sbjct: 182 EAQIAEGRADAAFQRLMAHQCQRAHKMLKAGSPLGKTLHGRIGFELRLIILGGQSILRKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           + + + + +             +  + +KK
Sbjct: 242 EENRYNVFTRRPVLGAKDWWLMLKRAWLKK 271


>gi|209885792|ref|YP_002289649.1| squalene synthase HpnD [Oligotropha carboxidovorans OM5]
 gi|209873988|gb|ACI93784.1| squalene synthase HpnD [Oligotropha carboxidovorans OM5]
          Length = 275

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 87/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F  ++  + D+      R   L  W+   ++  +G   
Sbjct: 16  SFYAAMRILPREQREAMFHIYSFCRKVDDIADSDGPRAERLAALAEWRRDIDALYEGHPT 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD-SYNDSIFDCKQFEHYAFRISSRLIH 152
             ++P+       V+++ L  + F+ +I+    D        D    + Y  R++S +  
Sbjct: 76  PRVAPYQAA----VKRFGLKREDFIAIIDGMEMDVPAEIRAPDEATLDLYCDRVASAVGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  +           +    G A  +  ++  +      G+LY P ++L   G+     
Sbjct: 132 LSVRVFGLSEDDGIA-LSHNLGRALQLTNILRDIDEDAGIGRLYLPRELLAGAGITSNDP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
                   I             Y  +A   M       V    I     + +LK     G
Sbjct: 191 QVVAADPNIPRVCMPIVARVKVYFREADAIMARYPRSTVRAPRIMSKYYQEILKRLLARG 250

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F         ++  +   +L  ++
Sbjct: 251 FAPPRQPVKLSKAAKMSILLRYAV 274


>gi|258541298|ref|YP_003186731.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632376|dbj|BAH98351.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635433|dbj|BAI01402.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638488|dbj|BAI04450.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641542|dbj|BAI07497.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644597|dbj|BAI10545.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647652|dbj|BAI13593.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650705|dbj|BAI16639.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653696|dbj|BAI19623.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-12]
          Length = 292

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 99/281 (35%), Gaps = 6/281 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D  +V   ++           + PP+ R  +  +Y F   +  + D       R   L+
Sbjct: 13  ADLAWVESTVKQAGTSFAAGMRILPPMRRYGMYAIYAFCRVVDDIADGLAPLAERTQALE 72

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH-FFDSYNDSIFDCK 137
            W        +  +     P    LL+ +  + L    F  +I+      +      D K
Sbjct: 73  EWHKKIAHLYQDRLETPHEPLERVLLAAIPFFALQQADFDAIIDGMLMDTASPIVAPDEK 132

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
             + Y  R+++ +  L+  I        +     + G A  +  ++  LP    RG+LY 
Sbjct: 133 TLDLYCDRVAAAVGRLSVRIFGECSDEGNKVAY-HLGRALQLTNILRDLPEDAARGRLYL 191

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI-LPDVFPAFIP 256
           P D+L    +     +    +  +    KI A     +   A   M+      + PA I 
Sbjct: 192 PSDLLDRFNV-PHDPVKALTAPGLQEVTKIIAARAQDHFTTAFATMKLCRPRTMLPARIM 250

Query: 257 VSITESVLKHAQNHGF--KIVSHSHTPNQLVRPWYMLSSSI 295
            +  E+VLK+ +  G+   ++      + + + + +  S +
Sbjct: 251 GASYETVLKNLRKRGWGPDVLRQLPESSTVGKVYALACSYL 291


>gi|256395790|ref|YP_003117354.1| squalene synthase HpnD [Catenulispora acidiphila DSM 44928]
 gi|256362016|gb|ACU75513.1| squalene synthase HpnD [Catenulispora acidiphila DSM 44928]
          Length = 287

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 83/282 (29%), Gaps = 10/282 (3%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                   R +R    +      L P   R +LS +Y F   +  + D +     R  +L
Sbjct: 4   QAAYEHCERVVRSRARNFAYGIRLLPTTKRQALSAVYAFARRVDDIGDGSETRGERLTQL 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
              ++      +        P  V L    RQ+ +P   F ++I+    D          
Sbjct: 64  AAAREELHRIDEH----PEDPVLVALADAARQHPIPLAAFDELIDGCEADVRGTDYATAD 119

Query: 138 QFEHYAFRISSRLIHLATMILDSER--YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
           Q   Y   ++  +  L+  +   +      +       G+A  +  ++  +      G++
Sbjct: 120 QLTFYCRCVAGSIGRLSLGVYGVDPARQKEASGYADSLGVALQLTNILRDIREDGLMGRV 179

Query: 196 YFPLDILGAVGLDRESFLSGQ---NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           Y P D L   G   +    G+   +   ++  ++  A     +  +    +  +      
Sbjct: 180 YLPADELVRHGCTLKIDEHGRFVDDDADLAALVRDQAARARAWYDEGLRLLPLLDRRSAA 239

Query: 253 A-FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                  I   +L          ++   +     +      +
Sbjct: 240 CTAAMAGIYRRLLIRIAEQPISALNARMSLPAWEKGVVAARA 281


>gi|254492129|ref|ZP_05105304.1| Squalene and phytoene synthases superfamily [Methylophaga
           thiooxidans DMS010]
 gi|224462681|gb|EEF78955.1| Squalene and phytoene synthases superfamily [Methylophaga
           thiooxydans DMS010]
          Length = 307

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 95/290 (32%), Gaps = 6/290 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI- 71
            +        F  +  +    +  +A LL P   R  +S +Y F        D       
Sbjct: 3   TKSELDNAYRFCQQLAQSHYENFPVASLLLPKRLRKPISVIYAFARTADDFADEGSESES 62

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
           TR  +L+ +    +  +        +P  + L  +++Q+ LP   F D++ A   D    
Sbjct: 63  TRLEQLEQYSTALKQISADNYQG-NAPIFIALQDVIQQHQLPIGLFDDLLSAFKQDVVKS 121

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY- 190
              +  +   Y    ++ +  L   + +       L+       A  +      +   Y 
Sbjct: 122 RYANFDEVLDYCRFSANPVGRLLLYL-NGSPSQQQLQQSDAICSALQLINFYQDIVQDYT 180

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            + ++Y P + L A GL     +   +S++I+  I+   +     +         +   +
Sbjct: 181 EQDRIYIPQNELAATGLKASDLIQP-DSEKIAPLIRSLYQRTADMMQAGYPLGASLTGRL 239

Query: 251 FPAFIPVSITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                 +++     L   +    + +       +      ML S+ K ++
Sbjct: 240 GWEIRAMTLGGIQTLALLRQQSDRSLLTRPRLKKTTLFGIMLRSARKGQY 289


>gi|288958301|ref|YP_003448642.1| hypothetical protein AZL_014600 [Azospirillum sp. B510]
 gi|288910609|dbj|BAI72098.1| hypothetical protein AZL_014600 [Azospirillum sp. B510]
          Length = 284

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 2/282 (0%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D  +  R +R  D D +LA L +P   R +   LY F+ E+ + R+    PI   MRL
Sbjct: 5   ATDLSYCGREVRKYDNDHFLAGLFTPADKREATFALYAFNIEIAKTREVVSEPILGQMRL 64

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           Q+W+D  ES                L    R   L    F  +++A   D  +    D  
Sbjct: 65  QFWRDGIESVYGEGPV-PRHEVMEPLAQAARGLGLSRALFDRLVDAREADLDDTPPADLA 123

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
              +YA    + L+ LA  IL     +A     ++ GIA  +  ++  +P    + +   
Sbjct: 124 CLVNYAEVTGAPLVQLALEILGVREAAAMAA-GRHVGIAYALSGILRAVPFLARQHRQRL 182

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P D++   G   E   +G+++  +   +   A +  K+L +AR   R +     PA +P 
Sbjct: 183 PDDLMRRHGARSEDLFAGRSTPGLRPVVAEVAAVARKHLAEARALRREVPKAAVPALLPA 242

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++ +  L      G  + +         R   +  ++I+ R+
Sbjct: 243 ALADLHLDVIAREGNDLFAPRVLLTNPFRQIRLGWAAIRGRY 284


>gi|90423226|ref|YP_531596.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisB18]
 gi|90105240|gb|ABD87277.1| Squalene/phytoene synthase [Rhodopseudomonas palustris BisB18]
          Length = 279

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 94/266 (35%), Gaps = 7/266 (2%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
               Y A  + P   R ++  +Y F   +  + D+      R   LQ W+D  E+  +G 
Sbjct: 18  SSSFYAAMRILPREQREAMFQVYSFCRYVDDIADSDGPRPQRLADLQQWRDDIEALYRGA 77

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRL 150
                 P   +  + ++++ L  Q FLD+I+    D   D    D    + Y  R++S +
Sbjct: 78  PP----PRLRDYTASLQRFGLKQQDFLDIIDGMEMDVPADIRAPDEATLDLYCDRVASAV 133

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
             L+  I           +  + G A  +  ++  +      G+LY P + L AVG+   
Sbjct: 134 GRLSVRIFGLPEDDGVA-LAHHLGRALQLTNILRDIDEDAGIGRLYLPREGLLAVGITST 192

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQN 269
              +      +S            +  +A E M       V    I      ++L+    
Sbjct: 193 EPQAVIADPALSRVCVPLVARAQTHFKRADEVMNRNPRRLVRAPRIMSKYYHAILQLLIA 252

Query: 270 HGFKIVSHSHTPNQLVRPWYMLSSSI 295
            GF +        +  R   +L  +I
Sbjct: 253 RGFDLPRAPVKLGKASRIAILLQYAI 278


>gi|330920493|ref|XP_003299027.1| hypothetical protein PTT_09938 [Pyrenophora teres f. teres 0-1]
 gi|311327442|gb|EFQ92860.1| hypothetical protein PTT_09938 [Pyrenophora teres f. teres 0-1]
          Length = 755

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 88/287 (30%), Gaps = 21/287 (7%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L+      YLA    P   R  L  LY F      + D A +       +   ++   + 
Sbjct: 293 LKRKSRSFYLASATFPGPLRADLLLLYSFCRVADDLVDNASDADEARAWIAKMRNFLNNV 352

Query: 88  T---------KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS---IFD 135
                        I +   P +      +    L  Q   D++     D        I  
Sbjct: 353 YNDKLPQSAVHTQIYDDFPPSTQSAFLQLPATKLSPQPLEDLLHGFEMDLAFQQGPIIST 412

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY--------SASLRVIKYAGIAQFIGQLICQLP 187
            +    Y+ R++  +  +   ++             +A +      G+A     +   + 
Sbjct: 413 AENLRVYSERVAGTVAQMCIQLIFYWYPSTLAIGEKNAIVAAGNSMGVALQYVNIARDIE 472

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           +    G++Y PL+ L   GL  +  L   N  +I    K           KA++ +  + 
Sbjct: 473 VDAQIGRVYLPLNWLFEAGLSYDDVLKKPNQAQIQTLRKHLLNDAFSVYEKAKDSIERLP 532

Query: 248 PDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +   P  + V     + +  +N  +++ +   T  +  R      +
Sbjct: 533 IEARGPIRVAVESYMEIGRILRNEQYQVKAGRATVPKSRRIVVAWRT 579


>gi|21218744|ref|NP_624523.1| phytoene synthase [Streptomyces coelicolor A3(2)]
 gi|5748649|emb|CAB53154.1| putative phytoene synthase [Streptomyces coelicolor A3(2)]
          Length = 331

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 84/271 (30%), Gaps = 7/271 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            + +         R         +LA  L P   R ++  LY F      + D      T
Sbjct: 12  TDPLLRAAYTRCRRLNARHGKTYFLATRLLPLERRSAVHALYGFARWADDIVDDLDRHRT 71

Query: 73  RDMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
              R +  + +      G        P    +     +YD+ +  F D + +   D    
Sbjct: 72  AGERDRALRRLESDLADGLRTGTGREPVVRAVADTADRYDIDHVLFADFLSSMRADLTVT 131

Query: 132 SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                   + Y    ++ +   +  ++        +       G+A  +   +  +    
Sbjct: 132 HYPTYADLQAYVHGSAAVIGLQMLPVLGTVTDRKEAAPHAAALGVAFQLTNFLRDVGEDL 191

Query: 191 HRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P  +L A G+DR        +G+   RI  A+     +  +    A   +  +
Sbjct: 192 DRGRVYLPGSLLAAHGVDRPLLEWSRRTGRRDRRIRAALVAAEAMTRRVYRTAEPGIAML 251

Query: 247 LPDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
            P V P      ++   +L       + ++ 
Sbjct: 252 DPRVRPCIRAAFTLYGGILDAIAEQDYTVLH 282


>gi|256790269|ref|ZP_05528700.1| phytoene synthase [Streptomyces lividans TK24]
 gi|289774144|ref|ZP_06533522.1| phytoene synthase [Streptomyces lividans TK24]
 gi|289704343|gb|EFD71772.1| phytoene synthase [Streptomyces lividans TK24]
          Length = 331

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 84/271 (30%), Gaps = 7/271 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            + +         R         +LA  L P   R ++  LY F      + D      T
Sbjct: 12  TDPLLRAAYTRCRRLNARHGKTYFLATRLLPLERRSAVHALYGFARWADDIVDDLDRHRT 71

Query: 73  RDMRLQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
              R +  + +      G        P    +     +YD+ +  F D + +   D    
Sbjct: 72  AGERDRALRRLESDLADGLRTGTGREPVVRAVADTADRYDIDHVLFADFLSSMRADLTVT 131

Query: 132 SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
                   + Y    ++ +   +  ++        +       G+A  +   +  +    
Sbjct: 132 HYPTYADLQAYVHGSAAVIGLQMLPVLGTVTDRKEAAPHAAALGVAFQLTNFLRDVGEDL 191

Query: 191 HRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            RG++Y P  +L A G+DR        +G+   RI  A+     +  +    A   +  +
Sbjct: 192 DRGRVYLPGSLLTAHGVDRPLLEWSRRTGRRDRRIRAALVAAEAMTRRVYRTAEPGIAML 251

Query: 247 LPDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
            P V P      ++   +L       + ++ 
Sbjct: 252 DPRVRPCIRAAFTLYGGILDAIAEQDYTVLH 282


>gi|291613904|ref|YP_003524061.1| squalene synthase HpnC [Sideroxydans lithotrophicus ES-1]
 gi|291584016|gb|ADE11674.1| squalene synthase HpnC [Sideroxydans lithotrophicus ES-1]
          Length = 271

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 87/267 (32%), Gaps = 5/267 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
           +   +  +A +L P   R  ++  Y+F      + D        R  +L  ++D      
Sbjct: 4   EHYENFPVASILLPRRLRQPVAAFYHFARAADDIADEGDLTNEERLQQLNDFRDELNHIA 63

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P    L   ++++ LP Q F D+++A   D       D  +   Y  R ++
Sbjct: 64  AD--ETPQLPLFKRLAVEIKEHALPMQPFRDLLDAFSQDVVKKRYSDYDELLDYCRRSAN 121

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            + +L   +   E  S ++        A  +      +   +  G++Y P D +   G+ 
Sbjct: 122 PVGNLLLHLY-EEATSVNIAYSDAICTALQLINFWQDVARDHAIGRIYLPQDEMAQFGVT 180

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
            +    GQ +D     ++   +     + +       +   +      +      +L   
Sbjct: 181 EDQISQGQTNDAWRALMRFEVDRTRALMLQGAPLGSILTGRIGLEMRMIIAGGLRILDKL 240

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           +   + +  H      L     +  S+
Sbjct: 241 EAADYDMFRHRPVLRPLDWVIMLAKSA 267


>gi|167567076|ref|ZP_02359992.1| phytoene synthase, putative [Burkholderia oklahomensis EO147]
 gi|167574152|ref|ZP_02367026.1| phytoene synthase, putative [Burkholderia oklahomensis C6786]
          Length = 282

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 85/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 23  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGPRAERAAQLDRWRADIDDCYAGKPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P   E    + ++ L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  ASLVPLVRE----IGKFGLHREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I       +   +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPD-ESGRVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHAQNHG 271
            +     ++        E   ++  +A   M       V    I       +L+ A   G
Sbjct: 198 QTIARDPKLPRVCATLVERAQRHFAQADAVMDASPRTQVRAPRIMSGAYRLILEAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +      +   ++
Sbjct: 258 FAPPRTPLRKPRARMLLLVARYAL 281


>gi|326382541|ref|ZP_08204232.1| phytoene synthase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198660|gb|EGD55843.1| phytoene synthase [Gordonia neofelifaecis NRRL B-59395]
          Length = 297

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 90/277 (32%), Gaps = 15/277 (5%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R      YLA  L P   R ++  LY +        D   +P  +  RL   +    +++
Sbjct: 11  RRAGRTYYLASRLLPADGRRAVFALYGYARTADDAVDEPGDPSVQGARLDALESGLRAAS 70

Query: 89  KGLIAESISP----FSVELLSIVRQYDLPNQYFLDMIEAHF-----FDSYNDSIFDCKQF 139
            G+   S +P        L   +R++ +P   F     +          + +   D  + 
Sbjct: 71  AGVSDASSNPDEADMLAALADAIRRFGIPPATFDAFGRSMRMDLPGHPMFRNRYADLAEL 130

Query: 140 EHYAFRISSRLIHLATMILDSERYSA-SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
             Y +  ++ +      IL ++             G A  +   +  +     R ++Y P
Sbjct: 131 ADYVYGSAAVIGLQLVPILGADPDDDEIAAGAALLGEAFQLTNFLRDVAEDLARDRVYLP 190

Query: 199 LDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           LD L A G+D E+      +G    R+  AI     +      +    +  + P   PA 
Sbjct: 191 LDHLAAFGVDEENLFADAAAGSTGPRLRRAIAHVVAVNRDQYRRTIPAITALPPRTRPAI 250

Query: 255 -IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                   ++L   +   +++           R  + 
Sbjct: 251 CAAARSYSAILTEIEQRDYEVFGGRAVVPLRRRIGHA 287


>gi|148673713|gb|EDL05660.1| mCG5105, isoform CRA_a [Mus musculus]
          Length = 263

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 3/235 (1%)

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D+        MR+Q+WK   E            P ++EL   V++++L  ++ + +I+  
Sbjct: 32  DSVSEKTIGLMRMQFWKKAVEDMYCDNP--PHQPVAIELWKAVKKHNLTKRWLMRIIDER 89

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             +  + +    ++ E+YA      L++L   +L  +   A      + G AQ I   + 
Sbjct: 90  EKNLDDKAYRSMQELENYAENTQGSLLYLTLEVLGVKDLHA-DHAASHIGKAQGIVTCLR 148

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
             P H  R Q++ P+D+    G+ +E FL       +   +   A     +L  AR   R
Sbjct: 149 ATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHR 208

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +  + FPAF+     E  LK  Q   F I   S     ++ P  +   S +KR+
Sbjct: 209 SVPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNMLLPLSLYIQSWRKRY 263


>gi|255671646|gb|ACU26407.1| phytoene synthase CrtB [uncultured bacterium HF186_25m_30B18]
          Length = 314

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 95/274 (34%), Gaps = 9/274 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            + L        LA +  P   R   + +Y F   +  + D AR+P   +  +    ++ 
Sbjct: 6   RQVLASHARTFNLASVFLPRDQRDDAAIVYAFCRTVDDLVDEARHPEEGERDIGHLAEML 65

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                       SP +   L +  +   P Q   D+++    D    ++ D +    Y +
Sbjct: 66  RG------ERPASPLAEAFLEVAERRGFPLQAAHDLMQGVLSDVGEVTLVDDRDLIQYGY 119

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            ++  +  +   ++      A    I   G+A  I  +   +     RG++Y P   L A
Sbjct: 120 AVAGTVGLMMCGVIGVREPWALAHAID-LGVAMQITNISRDVVEDAGRGRIYIPTRRLVA 178

Query: 205 VGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-IPVSITES 262
            G+D E    G    +  +  ++   EL  +Y     E MR I      A      +  +
Sbjct: 179 AGIDPEQVRVGDIDGEAFAPVLRDVLELAERYYASGDEGMRAIPWRPRLAIQSASRVYRA 238

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +    ++  + +           +  ++L + ++
Sbjct: 239 IGLVLRDRAYDVTQGRAVVPGAAKVSWVLRAVVR 272


>gi|91775821|ref|YP_545577.1| squalene/phytoene synthase [Methylobacillus flagellatus KT]
 gi|91709808|gb|ABE49736.1| Squalene/phytoene synthase [Methylobacillus flagellatus KT]
          Length = 291

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 90/274 (32%), Gaps = 5/274 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIF 84
              +    +  +A +L P   R  +  +Y F  +     D    +P  R   L  ++   
Sbjct: 21  ALAKAHYENFPVASVLLPKDLRAPVGLVYAFARQADDFADEGELSPEERLALLDGFRSQL 80

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           +       A   +P    L +++++ DLP + F D++ A   D       +  +   Y  
Sbjct: 81  DQI--KHGATPDTPLFQALQAMIQERDLPLEPFYDLLSAFSQDVVKARYANFGEVIDYCR 138

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           R ++ +  L   +           +      +  +   +  + + Y + ++Y PLD L  
Sbjct: 139 RSANPVGRLMLHLYKQATPRNVA-LSDAICTSLQLINFLQDVDVDYRKNRIYLPLDELQK 197

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP-VSITESV 263
             +  +      +    SL ++       K L         +   +       ++  E +
Sbjct: 198 YNITEQQIAGQHSGGTWSLFMEFQVNRTRKLLQSGAPLGLALPGRIGLEMRMIIAGGERI 257

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           LK   +    + +   T       + +  +  KK
Sbjct: 258 LKKLHHVRGDVFNQRPTLKPTDWAYMLYRAVRKK 291


>gi|312215041|emb|CBX94994.1| similar to phytoene synthase/lycopene cyclase [Leptosphaeria
           maculans]
          Length = 581

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 97/314 (30%), Gaps = 22/314 (7%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           ++   LT   + +E   +      +  L+      YLA        R+ L  LY F    
Sbjct: 267 LIRSLLTSCAQYDEARLT-GFREAVSRLKRKSRSFYLASSTFQGPLRMDLLLLYSFCRVA 325

Query: 61  MRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI--SPFSVELLS-------IVRQYD 111
             + D A         +       ++  +  +  S        E           +    
Sbjct: 326 DDLVDNAATTEEARQWIAKLHKFLDNVYRKDVVCSSVTDQVRKEFPLDTHSALLQLPCCK 385

Query: 112 LPNQYFLDMIEAHFFDSYND---SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
           L  +   D++     D   +    I   +    Y+ R++  +  +   ++     S+   
Sbjct: 386 LSAEPLRDLLRGFEMDLEFNSTSPIQSTEDLVLYSERVAGTVAQMCIQLIFHLYPSSLTA 445

Query: 169 VIKY--------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR 220
             ++         G+A     +   + +    G++Y P D L  VGL+ ++ L      R
Sbjct: 446 EKRHKVVAAGNSMGVALQYVNIARDIGVDAKIGRVYLPTDWLSEVGLNCDTVLKDPKDPR 505

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSH 279
           I        +    +  +A+  +  +  +   P  + V     + +  +  GF + +   
Sbjct: 506 IEALRGRLLDDAFSFYEEAKLAIAQLPIEAQGPIRVAVESYMEIGRTLKQDGFIVKAGRA 565

Query: 280 TPNQLVRPWYMLSS 293
           T  +  R      +
Sbjct: 566 TVPKWRRVLVAWRT 579


>gi|255671720|gb|ACU26478.1| phytoene/squalene synthetase [uncultured bacterium HF186_25m_13D19]
          Length = 323

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 95/274 (34%), Gaps = 9/274 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            + L        LA +  P   R   + +Y F   +  + D AR+P   +  +    ++ 
Sbjct: 15  RQVLASHARTFNLASVFLPRDQRDDAAIVYAFCRTVDDLVDEARHPEEGERDIGHLAEML 74

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                       SP +   L +  +   P Q   D+++    D    ++ D +    Y +
Sbjct: 75  RG------ERPASPLAEAFLEVAERRGFPLQAAHDLMQGVLSDVGEVTLVDDRDLIQYGY 128

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            ++  +  +   ++      A    I   G+A  I  +   +     RG++Y P   L A
Sbjct: 129 AVAGTVGLMMCGVIGVREPWALAHAID-LGVAMQITNISRDVVEDAGRGRIYIPTRRLVA 187

Query: 205 VGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-IPVSITES 262
            G+D E    G    +  +  ++   EL  +Y     E MR I      A      +  +
Sbjct: 188 AGIDPEQVRVGDIDGEAFAPVLRDVLELAERYYASGDEGMRAIPWRPRLAIQSASRVYRA 247

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +    ++  + +           +  ++L + ++
Sbjct: 248 IGLVLRDRAYDVTQGRAVVPGAAKVSWVLRAVVR 281


>gi|11066678|gb|AAG28701.1|AF272737_4 CrtB [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 342

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 83/279 (29%), Gaps = 7/279 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +                     +LA  L P   R ++  LY F      + D   +  T 
Sbjct: 13  DPALRAAYTRCRVLNARHGRTYFLATRLLPVDRRPAVHALYGFARRADDIVDDLDSSATP 72

Query: 74  DMRLQWWKDIFESSTKGLIAES-ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             R +   D+      GL       P    L     +Y + +++F D + +   D     
Sbjct: 73  GERARALLDLEARLEAGLRGAPAAEPVIRALADTAGRYAIDHRHFTDFLRSMRSDLTVGG 132

Query: 133 IFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
               ++   Y    ++ +   +  ++        S       G+A      +  +     
Sbjct: 133 YASYEELGRYMHGSAAVIGLQMLPVLGTVVPREESAPHAAALGVAFQWINFLRDVGEDVD 192

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQ----NSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
             +LY   ++LGA   DR+ F S +       RI+  +   A         A   +  + 
Sbjct: 193 PERLYLATELLGAHRADRDRFESSRSTGMPDSRITDVLPAAAAHYRAVYRAALPGIAMLA 252

Query: 248 PDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLV 285
           P   P       +   +L   +  G+ ++       +  
Sbjct: 253 PVSRPCIRTAFVLYSGILDAIEADGYALLHRPAVVPRRR 291


>gi|299066662|emb|CBJ37855.1| phytoene synthetase [Ralstonia solanacearum CMR15]
          Length = 277

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 87/276 (31%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          D Y + L   P  R +   L     EL      A +P     +LQWW+
Sbjct: 5   DYCADKAAPAGSDLYYSVLFLAPERRRATVALEAVRRELEDAVRDASDPAVVQSKLQWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P +  L   +  YD+   +  ++      D+  +   D      
Sbjct: 65  QELARLFD---GRPEHPATKALQPHLAAYDIGAVHLGELFAGIEADAMQNRYLDWPNLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           +  +++     L   I     +  +L   +   +A+ +   I  L       ++Y P+D 
Sbjct: 122 HGDQVAGVAGRLTARI-AGHAHGRTLEFARLQALAEQLVHFIRNLGDDVRHNRVYIPVDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +      + + SD     +   A+       +A   +         PA I   + 
Sbjct: 181 LQRFNVPAADLFNRRYSDGFKTLMAFQADRARATHREALAALPAEDRRAQRPALIRGVLA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +L   +  GF++++       L + W    + ++
Sbjct: 241 MRLLDELEADGFQVLTQRTDLTPLRKLWLAWKTQLR 276


>gi|315122666|ref|YP_004063155.1| phytoene synthase protein [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496068|gb|ADR52667.1| phytoene synthase protein [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 254

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 166/251 (66%), Positives = 201/251 (80%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + ++D LF L NLRD+D DRYLACLLSP   RI L+ LY F+ EL RVRD A NP+  ++
Sbjct: 1   MAAQDHLFSLHNLRDMDRDRYLACLLSPSHLRIPLAILYSFNAELARVRDLASNPLAGEI 60

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RLQWWKDIFESS   +++ES SP S++L+SI+ QY LP Q+F DMIEA FFD YNDSIFD
Sbjct: 61  RLQWWKDIFESSRDNILSESKSPLSIKLVSIINQYALPYQFFFDMIEARFFDPYNDSIFD 120

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
           CKQ E YAF+I+S LIHLATMIL  ++    + VIK+AGIAQFIG+LI  L  H +RGQL
Sbjct: 121 CKQLEIYAFKIASSLIHLATMILSDKKNFDIIDVIKHAGIAQFIGELILLLSKHCNRGQL 180

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y PLDILGAVGLDRESF SG+N++RISL IKIFAELGL++L KAR+EM +I PD+FPAFI
Sbjct: 181 YLPLDILGAVGLDRESFFSGENNERISLVIKIFAELGLEHLVKARKEMNHISPDIFPAFI 240

Query: 256 PVSITESVLKH 266
           PVSITE++LK 
Sbjct: 241 PVSITENILKK 251


>gi|169595210|ref|XP_001791029.1| hypothetical protein SNOG_00339 [Phaeosphaeria nodorum SN15]
 gi|111070714|gb|EAT91834.1| hypothetical protein SNOG_00339 [Phaeosphaeria nodorum SN15]
          Length = 585

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 82/287 (28%), Gaps = 21/287 (7%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L+      YLA    P   R  L  LY F      + D A         +       +  
Sbjct: 293 LKRKSRSFYLASATFPGPLRSDLLLLYSFCRVADDLVDNAATAEEAKEWISKLHQYLDLV 352

Query: 88  T--KGLIAESISPFSVELLS-------IVRQYDLPNQYFLDMIEAHFFDSYND---SIFD 135
                    S         S        +  + LP Q   D++     D   +    I  
Sbjct: 353 YSDAKSSTVSEDFVQAHFPSDARSALLQLPAHKLPRQPLQDLLHGFEMDLAFNTSSPIKT 412

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY--------AGIAQFIGQLICQLP 187
                 Y+ R++  +  +   ++     S      +          G+A     +   + 
Sbjct: 413 ETDLRLYSERVAGTVAQMCIELIFRLYPSNMTSGEERKVVDAGNQMGMALQYVNIARDIS 472

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           +  H G++Y PLD L   GL  +  L      R+        E        AR  +  + 
Sbjct: 473 VDAHIGRVYLPLDWLQESGLTYDEVLISPEGARMESLRMRLLEKAFSIYDGARGAIETLP 532

Query: 248 PDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +   P  + V     + +  +  G+ + +   T ++  R      +
Sbjct: 533 VEARGPIRVAVESYMEIGRTLRQKGYTVRAGRATVSKWRRVIVAWRT 579


>gi|222617517|gb|EEE53649.1| hypothetical protein OsJ_36943 [Oryza sativa Japonica Group]
          Length = 380

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 32/287 (11%), Positives = 77/287 (26%), Gaps = 58/287 (20%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           +             +     YL   L  P  R ++  +Y +      +       +   M
Sbjct: 141 LLGDAYHRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDEL---PFKDMIEGM 197

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RL  WK                                                      
Sbjct: 198 RLDLWKSR-------------------------------------------------YRS 208

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  +   ++           +        GIA  +  ++  +    
Sbjct: 209 FDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDS 268

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG++Y PLD L   GL  E    G+ +D+    +K        +  +A + + ++    
Sbjct: 269 RRGRIYLPLDELAEAGLTEEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSAS 328

Query: 251 F-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             P    + +   +L   + + +   +     N+  +   +  +  +
Sbjct: 329 RWPVLASLWLYRQILDAIEANDYNNFTKRAYVNKAKKLLSLPVAYAR 375


>gi|300691396|ref|YP_003752391.1| phytoene synthetase [Ralstonia solanacearum PSI07]
 gi|299078456|emb|CBJ51108.1| phytoene synthetase [Ralstonia solanacearum PSI07]
          Length = 277

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 87/276 (31%), Gaps = 5/276 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +          D Y + L   P  R +   L     EL      A +P     +LQWW+
Sbjct: 5   DYCAGKAAPAGSDLYYSVLFLAPERRRATVALEAVRRELEDAVRDASDPAVVQSKLQWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                           P +  L   +  YD+   +  ++      D+  +   D      
Sbjct: 65  QELARLFD---GRPEHPATKALQPHLAAYDIGAVHLGELFAGIEADAMQNRYLDWPNLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           +  +++     LA  I        +L   +   +A+ +   I  L       ++Y P+D 
Sbjct: 122 HGDQVAGVAGRLAARI-AGHAQGRTLEFARLLALAEQLVHFIRNLGDDVRHNRVYIPVDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +      + + SD     +   AE       +A   +         PA I   + 
Sbjct: 181 LQRFNVPAADLFNRRYSDGFKTLMAFQAERARATHREALAALPAQDRRAQRPALIRGVLA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +L   +  GF++++       L + W    + I+
Sbjct: 241 MRLLDELEADGFQVLTQRTDLTPLRKLWLAWKTQIR 276


>gi|195131877|ref|XP_002010371.1| GI15887 [Drosophila mojavensis]
 gi|193908821|gb|EDW07688.1| GI15887 [Drosophila mojavensis]
          Length = 278

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/278 (21%), Positives = 103/278 (37%), Gaps = 7/278 (2%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            +   DY+ YL+ LL P   R S   L  F+ E+ R        P    MRL++W D  +
Sbjct: 3   LVEKYDYENYLSTLLLPKELRPSAFALRAFNVEVSRSVGAQVTEPQIAKMRLKFWYDSID 62

Query: 86  SSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
              +    +S     P   EL   V    L   Y   M+ A        +    +  E Y
Sbjct: 63  KCFETDANKSYVKDQPVLRELKRTVGSSKLNKLYLRRMVTARERPPNQ-AFETMRDLEDY 121

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
           A +  + L+HL   +   +          + G AQ I  L+  +P    +  +  PL++L
Sbjct: 122 ADQTCASLLHLLVQLSGVQDMQ-VDHAASHLGKAQGITMLLRAIPHAGRQQAVSVPLEVL 180

Query: 203 GAVGLDRESFLSG-QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
              G+ +E  L   +    +   I   A L   +L   R+ +  +   V   F+P   T+
Sbjct: 181 VRHGVSQERILRSDREDKGVEECIFEVASLANTHLKLTRQLLPQMPRLVRKIFLPAVATD 240

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             L+  +   F +   S      + P  +   +I  ++
Sbjct: 241 GYLERLRRAHFLLTHPSCVKRDSLLPARLFWKTIFNKY 278


>gi|121605852|ref|YP_983181.1| squalene/phytoene synthase [Polaromonas naphthalenivorans CJ2]
 gi|120594821|gb|ABM38260.1| Squalene/phytoene synthase [Polaromonas naphthalenivorans CJ2]
          Length = 297

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 82/270 (30%), Gaps = 4/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESST 88
               +  +A LL PP  R +++ +Y+F      + D     P  R   L  ++    ++ 
Sbjct: 29  SHYENFPVASLLCPPHLRPAIAAIYWFARTADDIADEGDALPQARLDDLAAYRADLMATA 88

Query: 89  K-GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                +   +     L  ++RQ+ LP     D++ A   D          +   Y  R +
Sbjct: 89  AGRAPSPRWADVFGRLGPVIRQFALPVNLLADLLSAFEQDVVKQRYASQAELLDYCRRSA 148

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           + +  L   +   +   + L        A  +      L +   RG++Y P D     G+
Sbjct: 149 NPVGRLLLHLYGVKDAPS-LIESDCICSALQLINFWQDLGVDIPRGRIYLPADAWAPHGV 207

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKH 266
           D    L  Q++      I          + K  + ++ +          V      +L  
Sbjct: 208 DEAQLLGLQSNQNTINLIATHVSQASAMMLKGSQLVKKVPGRGGWELRLVVQGGLRILDK 267

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               GF  +                 +   
Sbjct: 268 IAAQGFDTLQRRPKLGAWDVAVMGWRALWM 297


>gi|311107366|ref|YP_003980219.1| squalene synthase HpnC [Achromobacter xylosoxidans A8]
 gi|310762055|gb|ADP17504.1| squalene synthase HpnC [Achromobacter xylosoxidans A8]
          Length = 276

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 84/272 (30%), Gaps = 9/272 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
           D   +  +A LL P   R +++ +Y +      + D         ++ L  ++       
Sbjct: 4   DHYENFPVASLLLPRRLRGAVTDIYRYARAADDIADEGSATDEERLKQLAAFRAELHRIG 63

Query: 89  KGLIAESI------SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               A         +   V L + + ++ LP   F D++ A   D       D      Y
Sbjct: 64  AEPGARPEPGSPELASIFVPLAATIARHQLPITPFYDLLSAFEQDISVKRYEDYATLADY 123

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             R ++ +  L   + ++     ++           +      + + +H+ ++Y P + L
Sbjct: 124 CTRSANPVGRLMLHLFEATNPQ-NVSEADAICTGLQLVNFWQDVRVDWHKQRVYLPQEDL 182

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE- 261
              G+  E   + + +      +    E     L       R +   +      V     
Sbjct: 183 RRHGVTDEDLAACRLTPAWRDLMAFEVERARALLHFGAPLARRLPGRMGLELRLVVQGGL 242

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            VL+  +  G+ +  +            M  +
Sbjct: 243 RVLERIEAGGYDVFMNRPELGAKDWAIMMWRA 274


>gi|27378113|ref|NP_769642.1| phytoene synthase [Bradyrhizobium japonicum USDA 110]
 gi|2113821|emb|CAA60248.1| unknown [Bradyrhizobium japonicum]
 gi|27351260|dbj|BAC48267.1| blr3002 [Bradyrhizobium japonicum USDA 110]
          Length = 279

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 89/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F  ++  + D+      R   LQ W+   ++  +G   
Sbjct: 20  SFYAAMRILPHDQREAMFQIYSFCRQVDDIADSDGPREERLAALQAWRTDIDALYQGNPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   + ++ V+ + L  + FL +++    D   D    D    + Y  R++S +  
Sbjct: 80  ----PRLKDYVASVKTFGLKREDFLAIVDGMEMDVPQDIRAPDMATLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  +              + G A  +  ++  +      G+LY P + L   G+     
Sbjct: 136 LSVRVFGLPEEDGIQLAY-HLGRALQLTNILRDIDEDAGLGRLYLPREALLHAGITSNDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
                   +       A+    +  K+ E M       V    I      S+L      G
Sbjct: 195 NRVIAERALPKVCLPLAQRAKVHFEKSDEIMNRNKRRTVRAPRIMSKYYHSILDLLIARG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F         +++ R   +L  + 
Sbjct: 255 FNAPREPVRVSKVTRILILLRYAF 278


>gi|85716673|ref|ZP_01047642.1| squalene/phytoene synthase [Nitrobacter sp. Nb-311A]
 gi|85696513|gb|EAQ34402.1| squalene/phytoene synthase [Nitrobacter sp. Nb-311A]
          Length = 278

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 93/264 (35%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D+ R    R   LQ W+D  ++   G   
Sbjct: 19  SFYAAMRILPRAQREAMFQVYTFCRYVDDIADSDRPRPERLAALQQWRDDIDALYGGQPP 78

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD-SYNDSIFDCKQFEHYAFRISSRLIH 152
           E       +    V+ + L  + FL +I+    D   +    +    + Y  R++S +  
Sbjct: 79  ER----LRDYAVSVQTFGLRREDFLAIIDGMEMDVLADIRAPEDATLDLYCDRVASAVGR 134

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  +         L +  + G A  +  ++  L      G+LY P + L   G++    
Sbjct: 135 LSVRVFGLPEQDGIL-LSHHLGRALQLTNILRDLDEDAGIGRLYLPREGLLQAGINCADP 193

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            +  ++  +        E    +  ++ + M            I      ++L   Q+ G
Sbjct: 194 AAVISNPALPEVCAQLMERAKTHFVESDKIMDRNSRRAVRAPRIMSKYYHAILDLLQDRG 253

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F+        +   +   +L  ++
Sbjct: 254 FQPPRSPVRVSYPAKIAIVLRYAL 277


>gi|239787479|emb|CAX83950.1| Squalene/phytoene synthase [uncultured bacterium]
          Length = 292

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 82/292 (28%), Gaps = 7/292 (2%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
           ++      + D  +    +R    +  +  +L P   R SL  +Y F  +     D    
Sbjct: 4   SKPVPASLTSDFRYCQDVVRSHRENFPVGSILLPSHMRRSLHAVYAFARQADDFADLPGR 63

Query: 70  PITRDMRL-QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                +RL   W    E +          P    L    ++  L  Q   +++ A   D 
Sbjct: 64  ADAERLRLLDDWSRRLELAA---TGRPDHPIFRALAHTFQETGLTAQPLNELLVAFRMDV 120

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            N       Q E Y    +  +  +             L           +      L  
Sbjct: 121 TNKRYDTIAQLEEYCRYSAHPVGRMVLHFAGVNDPE-VLAWSDDICTGLQLTNHWQDLGQ 179

Query: 189 HYHRG-QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
              +G  LY P + +   G+D +  L  + S  +   +    E   ++    R  +R + 
Sbjct: 180 DPWKGRPLYLPKEEMDRFGVDEKMVLGRRFSPPLGQLMLYMVEETRRHFQAGRPLLRAVR 239

Query: 248 PDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                    V      +L   +      +    T +       +L ++   R
Sbjct: 240 WPFNLELALVWEAGMVLLDRIEGMAGNTLRRRPTLDTRDWLGCLLRAAGGGR 291


>gi|241760171|ref|ZP_04758269.1| squalene synthase HpnC [Neisseria flavescens SK114]
 gi|241319625|gb|EER56055.1| squalene synthase HpnC [Neisseria flavescens SK114]
          Length = 271

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 28/270 (10%), Positives = 82/270 (30%), Gaps = 6/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESSTK 89
              +  +  ++ P   R  +  +Y F      + D        R  +L   K   +   +
Sbjct: 5   HYENFPVGSIVLPRRLRKPVHAVYAFARTADDIADEGNAEAAERLRQLDKLKAELDCIAQ 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
               +  +     L +  +  + LP Q F D++ A   D       +  +   Y    ++
Sbjct: 65  --GGKPQTALMQCLHNEAIEPFQLPLQPFYDLLAAFSQDVVKTRYENFGELIAYCRLSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +       +  +       A  +      + + + +G++Y P + L    + 
Sbjct: 123 PVGRIMLHLYGQTDEVSMAQ-SDGICTALQLINFWQDVAVDWQKGRVYIPQEDLQKFKVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKHA 267
            E    G+        +    +   + L       + +   +      + +    +L+  
Sbjct: 182 EEQIAVGKVDFAFQRLMAHECQRAFQMLKAGSPLGKTLKGRIGFELRMIIVGGQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               + + +     ++      +  + +KK
Sbjct: 242 DGCKYDVFNQRPLLDKKDWMIIIKRALMKK 271


>gi|149061060|gb|EDM11670.1| similar to F23N19.9 (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 265

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 3/235 (1%)

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D+        MR+Q+W+   E            P ++EL   V++++L  ++ L +I+  
Sbjct: 34  DSVSEKTIGLMRMQFWRKAVEDMFCDNP--PHQPVAMELWKAVKRHNLTKRWLLRIIDER 91

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             +  + +    ++ E YA    S L++L   +L  +   A      + G AQ I   + 
Sbjct: 92  EKNLDDKAYRSIRELETYAENTQSSLLYLTLEVLGVKDVHA-DHAASHIGKAQGIVTCLR 150

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
             P H  R Q++ P+D+    G+ +E FL       +   +   A     +L  AR    
Sbjct: 151 ATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHS 210

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +  + FPAF+     E  LK  Q   F I   S      + P  +   S +KR+
Sbjct: 211 RVPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNTLLPLSLYIQSWRKRY 265


>gi|148254413|ref|YP_001238998.1| putative phytoene synthase [Bradyrhizobium sp. BTAi1]
 gi|146406586|gb|ABQ35092.1| Putative phytoene synthase [Bradyrhizobium sp. BTAi1]
          Length = 279

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 93/264 (35%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + PP  R ++  +Y F  E+  + D+      R   LQ W+D  ++  +G   
Sbjct: 20  SFYAAMRILPPAQRDAMFQVYSFCREVDDIADSNGPRSERLAALQKWRDDIDALYQGNPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   + +S V+ + L  + FL +I+    D   +    D    + Y  R++S +  
Sbjct: 80  ----PRLRDYVSSVKTFGLKREDFLAIIDGMEMDVPQEIRAPDLATLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I         L +  + G A  +  ++  +      G+LY P + L   G+  +  
Sbjct: 136 LSVRIFGMPEEDGIL-LAHHLGRALQLTNILRDIDEDAGIGRLYLPREALLFAGITGDDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSITESVLKHAQNHG 271
                   +       A     +  KA E MR        A  I      +V       G
Sbjct: 195 AKVVQERALPKVCNSVAIRAKTHFEKADEIMRRNRRRTVRAPRIMAKYYRAVFDLLLERG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F         ++L +   +L  + 
Sbjct: 255 FAPPREPVRVSKLTKIGIILRYAF 278


>gi|170751794|ref|YP_001758054.1| squalene synthase HpnD [Methylobacterium radiotolerans JCM 2831]
 gi|170658316|gb|ACB27371.1| squalene synthase HpnD [Methylobacterium radiotolerans JCM 2831]
          Length = 283

 Score =  152 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 97/278 (34%), Gaps = 7/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           ++D       L       Y A  L P   R ++  +Y F   +  V D       R + L
Sbjct: 8   AQDPESAAPALPAAGSSFYTAMRLLPKERREAMYAVYAFCRAVDDVADDGGTRAVRQVEL 67

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDC 136
             W+   ++   G  A        +L+  VR++ L  + F  +I+    D+  D +  D 
Sbjct: 68  DRWRADIDALYAGRPAAR----VRDLVEPVRRFGLKREDFQAVIDGMAMDAVEDIVAPDA 123

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +  + Y  R++S +  L+  I              + G A  +  ++  +     RG+LY
Sbjct: 124 ETLDLYCDRVASAVGRLSVRIFGMPEADGIRLAW-HQGRALQLTNILRDIDEDAERGRLY 182

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFI 255
            P + L A+GL   + +   +  RI       A     +     E +R         A +
Sbjct: 183 LPREKLRAIGLTDPTPVQAISHPRIGEVCVSLAREAEDHYQATWEIIRRSPRKATKAARL 242

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             +     LK     G+ +      P +L     +L  
Sbjct: 243 MAAAYHLYLKAVLARGWAMPRARVKPGKLALLGVVLRH 280


>gi|18307500|emb|CAD19988.1| carotene cyclase [Gibberella fujikuroi]
          Length = 612

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 94/315 (29%), Gaps = 28/315 (8%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
            L K    EE+I  +  +  +  LR      YLA        RI L  LY F      + 
Sbjct: 297 ILPKEKYDEERI--QGLVSAVALLRKKSRSFYLASGTFEGRLRIDLIRLYAFCRAADDLV 354

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESIS-----------PFSVELLSIVRQYDLP 113
           D A +       ++  +   + + +    E                    L  +  Y LP
Sbjct: 355 DEAPSVDDSRASIEKLRKFLDLAYEENQEEPSQRLREYVTSSIPEMFHMALLQLPTYYLP 414

Query: 114 NQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL 167
            Q   D+++    D   D       I   +  + Y  R++  +  L   ++      A  
Sbjct: 415 KQPLDDLLKGFDTDLLFDRKSGAFPIETTEDLDIYGSRVAGTVAELCNHLILYHTPEAVP 474

Query: 168 RVIKY--------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSD 219
             I+          GIA     +   +       ++Y PL  L    L  E  +   +  
Sbjct: 475 EDIQREVVASGQEMGIALQYVNIARDIKTDAEIDRVYLPLSWLKEAQLTPEDVIQQPHGP 534

Query: 220 RISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHS 278
            I        +   +    A+  +  +  +   P  + V     + +  +  G  +    
Sbjct: 535 TIEALRHKLLDRAFEKYNMAKGAIDKLPSEGKGPIRVAVESYMEIGRVLREKGPTMKKGR 594

Query: 279 HTPNQLVRPWYMLSS 293
            T  ++ R     S+
Sbjct: 595 ATVPKMRRIRVAWSA 609


>gi|58040684|ref|YP_192648.1| putative phytoene synthase [Gluconobacter oxydans 621H]
 gi|58003098|gb|AAW61992.1| Putative phytoene synthase [Gluconobacter oxydans 621H]
          Length = 291

 Score =  151 bits (382), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 101/281 (35%), Gaps = 7/281 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D   V R +            + PP  R ++  +Y F  +   + D           L
Sbjct: 16  QADLDHVERIVTASGTSFARGMSILPPDRRQAMFAVYAFCRQADDIADGDAGVADPMAAL 75

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS-YNDSIFDC 136
           Q W    +   +G+  +++      L+  + +Y L  + F D+I+    D        D 
Sbjct: 76  QEWHRRIDQLYEGVATDALDRI---LIVAIHRYQLQAKDFHDVIDGMAMDCGAPIVAPDE 132

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              + Y  R++S +  L+  +      +A      + G A  +  ++  +     RG+LY
Sbjct: 133 ATLDLYCDRVASAVGRLSVCVFGDSSDNARRVAY-HLGRALQLTNILRDIAEDAGRGRLY 191

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFI 255
            P ++L    +  ++      +  +    +I A+    +  +AR  MR        PA +
Sbjct: 192 LPAELLTRFDV-PKNPQEALYAHGLDQVARILAQRAKDHFREARNAMRLCDSTAMRPARM 250

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +    +L   +  G+K    +    +  R    L++ +K
Sbjct: 251 MAASYAPILSALEKRGWKTPDIAPKVCKPWRQLRTLAAYVK 291


>gi|115523829|ref|YP_780740.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisA53]
 gi|115517776|gb|ABJ05760.1| Squalene/phytoene synthase [Rhodopseudomonas palustris BisA53]
          Length = 279

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 94/264 (35%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D+      R   LQ W+D  ++  +G   
Sbjct: 20  SFYAAMRILPREQREAMFQVYSFCRYVDDIADSDGPRPQRLADLQQWRDDIDALYRGAPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   +  + +RQ+ L  Q FLD+I+    D   D    D +  + Y  R++S +  
Sbjct: 80  ----PRLRDYTASLRQFGLKQQDFLDIIDGMEMDVPADIRAPDEQTLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +      G+LY P + L A G+     
Sbjct: 136 LSVRIFGLPEEDGIA-LAHHLGRALQLTNILRDVDEDAGIGRLYLPREGLAAAGITSTDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
           L+   S  +           L +   A E M       V    I      S+L      G
Sbjct: 195 LTVMASPALPQVCAPLVARALAHFTNADEVMSRHPRRIVRAPRIMSKYYHSILHLLIERG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F+         +  R   +L  +I
Sbjct: 255 FEKPRFPVKLGKASRIAILLQYAI 278


>gi|187478907|ref|YP_786931.1| phytoene synthase [Bordetella avium 197N]
 gi|115423493|emb|CAJ50027.1| phytoene synthase [Bordetella avium 197N]
          Length = 273

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 4/271 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESST 88
           D   +  +A +L P   R ++  +Y +      + D    +P  R   L+ ++       
Sbjct: 4   DHYENFPVASVLLPRRLRPAVRDIYRYARSADDIADEGEASPSERVAELERFRAELHHLG 63

Query: 89  KGLIAESI-SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
            GL  +   +P    L + +RQ+ LP   F D++ A   D       D      Y  R +
Sbjct: 64  AGLPGDPALAPIFEPLAATIRQHQLPITPFFDLLSAFEQDVGTLRYADFLSLRDYCSRSA 123

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
             +  L   +  +                  +      + + + +G++Y P + L   G+
Sbjct: 124 DPVGRLMLHLYQAATPENIRD-ADAICTGLQLTNFWQDVQVDWRKGRVYLPEEDLIRFGV 182

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKH 266
             E   + + +      +    +     L       R +   +      V      +L+ 
Sbjct: 183 SEEDLAACRLTPAWRALMAFEIDRTRALLHSGAALPRRLPGRIGLELRLVIQGGLRILQR 242

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +   + +  +               +   +
Sbjct: 243 IEQADYDVFMNRPQLGARDWAILAWRALTSR 273


>gi|71908318|ref|YP_285905.1| squalene/phytoene synthase [Dechloromonas aromatica RCB]
 gi|71847939|gb|AAZ47435.1| Squalene/phytoene synthase [Dechloromonas aromatica RCB]
          Length = 269

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 80/269 (29%), Gaps = 5/269 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
           D   +  +A LL P   R  +  +Y F      + D         +  L  ++   +   
Sbjct: 4   DHYENFPVASLLLPRALRQPIEVIYRFARSADDIADEGDASSDERLAGLATYQAELDRIA 63

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                   +P  VEL  ++  + LP Q F D++EA   D       D  +   Y  R ++
Sbjct: 64  A--GTRPQTPLFVELAKVISAHALPIQLFRDLLEAFAQDVVKKRYADYPELLDYCRRSAN 121

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +         L        A  +      + + + + ++Y P        L 
Sbjct: 122 PVGRLVLHLFGRTEPE-HLEQSDCICTALQLINFWQDVAVDWQKDRVYIPQTDFPHFRLS 180

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHA 267
            +     + S   +  +    +     + +    +  +   + +   + +     +L+  
Sbjct: 181 EDDIAHSRWSANWAALMDFEMDRATALMKRGAPLVHALPGRLGWEIRLTIQGGLRILERI 240

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +     + +      +         S   
Sbjct: 241 RQVRGDVFTRRPKLGKWDWLVLAGRSIRM 269


>gi|15610533|ref|NP_217914.1| phytoene synthase [Mycobacterium tuberculosis H37Rv]
 gi|15842991|ref|NP_338028.1| phytoene synthase-related protein [Mycobacterium tuberculosis
           CDC1551]
 gi|31794578|ref|NP_857071.1| phytoene synthase [Mycobacterium bovis AF2122/97]
 gi|121639322|ref|YP_979546.1| putative phytoene synthase phyA [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148663261|ref|YP_001284784.1| phytoene synthase-related protein [Mycobacterium tuberculosis
           H37Ra]
 gi|148824605|ref|YP_001289359.1| phytoene synthase phyA [Mycobacterium tuberculosis F11]
 gi|167968717|ref|ZP_02550994.1| phytoene synthase phyA [Mycobacterium tuberculosis H37Ra]
 gi|215405435|ref|ZP_03417616.1| phytoene synthase phyA [Mycobacterium tuberculosis 02_1987]
 gi|215413304|ref|ZP_03421989.1| phytoene synthase phyA [Mycobacterium tuberculosis 94_M4241A]
 gi|215428900|ref|ZP_03426819.1| phytoene synthase phyA [Mycobacterium tuberculosis T92]
 gi|215432364|ref|ZP_03430283.1| phytoene synthase phyA [Mycobacterium tuberculosis EAS054]
 gi|215447726|ref|ZP_03434478.1| phytoene synthase phyA [Mycobacterium tuberculosis T85]
 gi|218755176|ref|ZP_03533972.1| phytoene synthase phyA [Mycobacterium tuberculosis GM 1503]
 gi|219559471|ref|ZP_03538547.1| phytoene synthase phyA [Mycobacterium tuberculosis T17]
 gi|224991819|ref|YP_002646508.1| putative phytoene synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800444|ref|YP_003033445.1| phytoene synthase phyA [Mycobacterium tuberculosis KZN 1435]
 gi|254233999|ref|ZP_04927324.1| phytoene synthase phyA [Mycobacterium tuberculosis C]
 gi|254366009|ref|ZP_04982054.1| phytoene synthase phyA [Mycobacterium tuberculosis str. Haarlem]
 gi|254552503|ref|ZP_05142950.1| phytoene synthase phyA [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188454|ref|ZP_05765928.1| phytoene synthase phyA [Mycobacterium tuberculosis CPHL_A]
 gi|260202525|ref|ZP_05770016.1| phytoene synthase phyA [Mycobacterium tuberculosis T46]
 gi|260206764|ref|ZP_05774255.1| phytoene synthase phyA [Mycobacterium tuberculosis K85]
 gi|289444946|ref|ZP_06434690.1| squalene synthase HpnD [Mycobacterium tuberculosis T46]
 gi|289449095|ref|ZP_06438839.1| phytoene synthase phyA [Mycobacterium tuberculosis CPHL_A]
 gi|289555673|ref|ZP_06444883.1| phytoene synthase phyA [Mycobacterium tuberculosis KZN 605]
 gi|289571634|ref|ZP_06451861.1| phytoene synthase phyA [Mycobacterium tuberculosis T17]
 gi|289576130|ref|ZP_06456357.1| phytoene synthase phyA [Mycobacterium tuberculosis K85]
 gi|289747225|ref|ZP_06506603.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289752115|ref|ZP_06511493.1| phytoene synthase phyA [Mycobacterium tuberculosis T92]
 gi|289755527|ref|ZP_06514905.1| phytoene synthase phyA [Mycobacterium tuberculosis EAS054]
 gi|289759558|ref|ZP_06518936.1| phytoene synthase phyA [Mycobacterium tuberculosis T85]
 gi|289763580|ref|ZP_06522958.1| phytoene synthase phyA [Mycobacterium tuberculosis GM 1503]
 gi|294995829|ref|ZP_06801520.1| probable phytoene synthase [Mycobacterium tuberculosis 210]
 gi|297636059|ref|ZP_06953839.1| probable phytoene synthase [Mycobacterium tuberculosis KZN 4207]
 gi|297733059|ref|ZP_06962177.1| probable phytoene synthase [Mycobacterium tuberculosis KZN R506]
 gi|298526880|ref|ZP_07014289.1| phytoene synthase phyA [Mycobacterium tuberculosis 94_M4241A]
 gi|306777738|ref|ZP_07416075.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu001]
 gi|306782465|ref|ZP_07420802.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu002]
 gi|306786285|ref|ZP_07424607.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu003]
 gi|306790655|ref|ZP_07428977.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu004]
 gi|306795182|ref|ZP_07433484.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu005]
 gi|306799373|ref|ZP_07437675.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu006]
 gi|306805220|ref|ZP_07441888.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu008]
 gi|306809405|ref|ZP_07446073.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu007]
 gi|306969511|ref|ZP_07482172.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu009]
 gi|306973856|ref|ZP_07486517.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu010]
 gi|307081568|ref|ZP_07490738.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu011]
 gi|313660390|ref|ZP_07817270.1| probable phytoene synthase [Mycobacterium tuberculosis KZN V2475]
 gi|54036898|sp|P65861|CRTB_MYCBO RecName: Full=Probable phytoene synthase
 gi|54041032|sp|P65860|CRTB_MYCTU RecName: Full=Probable phytoene synthase
 gi|1449390|emb|CAB01026.1| PROBABLE PHYTOENE SYNTHASE PHYA [Mycobacterium tuberculosis H37Rv]
 gi|13883331|gb|AAK47842.1| phytoene synthase-related protein [Mycobacterium tuberculosis
           CDC1551]
 gi|31620175|emb|CAD95618.1| PROBABLE PHYTOENE SYNTHASE PHYA [Mycobacterium bovis AF2122/97]
 gi|121494970|emb|CAL73456.1| Probable phytoene synthase phyA [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124599528|gb|EAY58632.1| phytoene synthase phyA [Mycobacterium tuberculosis C]
 gi|134151522|gb|EBA43567.1| phytoene synthase phyA [Mycobacterium tuberculosis str. Haarlem]
 gi|148507413|gb|ABQ75222.1| phytoene synthase-related protein [Mycobacterium tuberculosis
           H37Ra]
 gi|148723132|gb|ABR07757.1| phytoene synthase phyA [Mycobacterium tuberculosis F11]
 gi|224774934|dbj|BAH27740.1| putative phytoene synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321947|gb|ACT26550.1| phytoene synthase phyA [Mycobacterium tuberculosis KZN 1435]
 gi|289417865|gb|EFD15105.1| squalene synthase HpnD [Mycobacterium tuberculosis T46]
 gi|289422053|gb|EFD19254.1| phytoene synthase phyA [Mycobacterium tuberculosis CPHL_A]
 gi|289440305|gb|EFD22798.1| phytoene synthase phyA [Mycobacterium tuberculosis KZN 605]
 gi|289540561|gb|EFD45139.1| phytoene synthase phyA [Mycobacterium tuberculosis K85]
 gi|289545388|gb|EFD49036.1| phytoene synthase phyA [Mycobacterium tuberculosis T17]
 gi|289687753|gb|EFD55241.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692702|gb|EFD60131.1| phytoene synthase phyA [Mycobacterium tuberculosis T92]
 gi|289696114|gb|EFD63543.1| phytoene synthase phyA [Mycobacterium tuberculosis EAS054]
 gi|289711086|gb|EFD75102.1| phytoene synthase phyA [Mycobacterium tuberculosis GM 1503]
 gi|289715122|gb|EFD79134.1| phytoene synthase phyA [Mycobacterium tuberculosis T85]
 gi|298496674|gb|EFI31968.1| phytoene synthase phyA [Mycobacterium tuberculosis 94_M4241A]
 gi|308213914|gb|EFO73313.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu001]
 gi|308324858|gb|EFP13709.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu002]
 gi|308329114|gb|EFP17965.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu003]
 gi|308332951|gb|EFP21802.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu004]
 gi|308336510|gb|EFP25361.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu005]
 gi|308340387|gb|EFP29238.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu006]
 gi|308344246|gb|EFP33097.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu007]
 gi|308348236|gb|EFP37087.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu008]
 gi|308352962|gb|EFP41813.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu009]
 gi|308356784|gb|EFP45635.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu010]
 gi|308360732|gb|EFP49583.1| phytoene synthase phyA [Mycobacterium tuberculosis SUMu011]
 gi|323717884|gb|EGB27073.1| phytoene synthase phyA [Mycobacterium tuberculosis CDC1551A]
 gi|326905241|gb|EGE52174.1| phytoene synthase phyA [Mycobacterium tuberculosis W-148]
 gi|328460176|gb|AEB05599.1| phytoene synthase phyA [Mycobacterium tuberculosis KZN 4207]
          Length = 302

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 89/270 (32%), Gaps = 10/270 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +         R    + Y    L P   R +LS +Y     +  V D    P T+   
Sbjct: 4   IEQAYRITESITRTAARNFYYGIRLLPREKRAALSAVYALGRRIDDVADGELAPETKITE 63

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L   +   ++     I +S  P  V L    R++ +P   F ++I+    +       D 
Sbjct: 64  LDAIRKSLDN-----IDDSSDPVLVALADAARRFPVPIAMFAELIDGARMEIDWTGCRDF 118

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y  R +  +  L   I      +A+ R  +  GIA     ++  +   +  G++Y
Sbjct: 119 DELIVYCRRGAGTIGKLCLSI-FGPVSTATSRYAEQLGIALQQTNILRDVREDFLNGRIY 177

Query: 197 FPLDILGAVGLDRESFLSGQNSD---RISLAIKIFAELGLKYLFKAREEMRYILPDVFP- 252
            P D L  +G+      +G   D   R++  ++  A+    +       + ++       
Sbjct: 178 LPRDELDRLGVRLRLDDTGALDDPDGRLAALLRFSADRAADWYSLGLRLIPHLDRRSAAC 237

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
                 I    L   +     +     + +
Sbjct: 238 CAAMSGIYRRQLALIRASPAVVYDRRISLS 267


>gi|238022434|ref|ZP_04602860.1| hypothetical protein GCWU000324_02342 [Kingella oralis ATCC 51147]
 gi|237867048|gb|EEP68090.1| hypothetical protein GCWU000324_02342 [Kingella oralis ATCC 51147]
          Length = 272

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 85/271 (31%), Gaps = 7/271 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESSTK 89
              +  +  +L P   R  +  +Y F      + D     P  R  +L       +    
Sbjct: 6   HYENFPVGSILLPRHLRRPIHAVYAFARTADDIADEGNATPAERQAQLAALTAELDRIAA 65

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                  +P    L    +  + LP + F D++ A   D+      +  +   YA R ++
Sbjct: 66  --SQAPHTPLMQRLHREAIAPFALPLKPFYDLLSAFQQDTEKTRYQNFAELIDYARRSAN 123

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +         L        A  +      + + + + ++Y P D L    + 
Sbjct: 124 PIGRIILQLN-GTTDPYHLAQSDGICTALQLINFWQDIALDWQKNRIYLPQDDLMKFQVR 182

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
            +    G+ + ++   I        K L       + +   +      + +    +L+  
Sbjct: 183 EQDIAQGKITPQLRQLIAHQCSKTHKILHAGAPLGKALTGRIGFEIRMIILGGNRILEKI 242

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             + + +  H  T        +++  + +K+
Sbjct: 243 AANQYDVFQHRPTL-DWKDWLHIVKRAWQKK 272


>gi|221112298|ref|XP_002155739.1| PREDICTED: similar to CG15738 CG15738-PA [Hydra magnipapillata]
          Length = 293

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 111/296 (37%), Gaps = 3/296 (1%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           +LK   +N             + +  ++  +++ YL  LL P   R +   +  F+ EL 
Sbjct: 1   MLKTCARNLVHSTNNTRNKIEYCVMLVKTKEFENYLCTLLLPFNVRTTGMIIRAFNIELA 60

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
           ++     +  T  MR+Q+W++  ES   G       P ++ L   + +  L    F  +I
Sbjct: 61  QIDALTSDLKTAQMRIQFWRETLESIYAGRP--PNHPVAISLALCLEKQMLSKASFNKLI 118

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQ 181
           +       N           Y     S ++HL    L++   ++ L   K+ G A  +  
Sbjct: 119 DIREKHLSNKPFMSLDDAATYGEYSVSPILHLIMEGLETTAPNSFL-SAKHLGKACSLVT 177

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           L+  +     R  +  P+++     L +E  L  +  ++     K      L ++ +  +
Sbjct: 178 LLRSVQYFTQRRIVLLPIELCYKYSLSQEDLLRNKYPEKTKNIYKEITNYALMHIDELHK 237

Query: 242 EMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
             + +       F+P    E  L + ++  F I +      Q + PW +  ++  K
Sbjct: 238 LKKSLSKTEKLIFLPSISCEIFLNNFRDLNFDIFNKKLYRRQWILPWRLFVTTYFK 293


>gi|114320067|ref|YP_741750.1| squalene/phytoene synthase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226461|gb|ABI56260.1| Squalene/phytoene synthase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 284

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 103/282 (36%), Gaps = 6/282 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
           +   +  +         + A L + P+ R  L  L+ FH E+  +     +P     +L 
Sbjct: 2   QALDYCRKKAAPPGSSLHYALLFATPVQRDGLLALHAFHREVTAIPGEVSDPAVGRAKLD 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW+   +   +    +   P    L+ ++RQ +LP + F D+I     D         ++
Sbjct: 62  WWRGEIDRVFE---RQPEHPVGHALVPVIRQSELPRERFEDIITGTALDLEYGVYPSFRE 118

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y  ++   +  LA          AS R   + G+A  +   +  L  H   G+ Y P
Sbjct: 119 LSAYGHQVGCAMADLALR-QAGYNDPASARFGHHLGMALLLTGRLRHLGRHARAGRFYLP 177

Query: 199 LDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIP 256
            D + A GL RE  L    +   +   ++   +    +  +A   +         PA I 
Sbjct: 178 EDEIHAAGLSREGLLRLPADHPGLQHLLQQQVDRARDFFRQADTALADRDRYAQRPALIM 237

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++   +L   +  G  ++        L + W    ++ ++R
Sbjct: 238 AALYRQLLVELERQGLPMLHRRVHLTPLRKLWLAWRTARRER 279


>gi|323136953|ref|ZP_08072033.1| squalene synthase HpnD [Methylocystis sp. ATCC 49242]
 gi|322397714|gb|EFY00236.1| squalene synthase HpnD [Methylocystis sp. ATCC 49242]
          Length = 287

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 95/271 (35%), Gaps = 12/271 (4%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  +  P  R ++  +Y F  E+  + D   +   R   L  W+   +    G I 
Sbjct: 21  SFYLAMRILEPARRDAMFAIYAFCREVDDIADDEGDRAMRRAALDKWRYELDELYAGRIR 80

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P +  L   VR++ L    F  +I+    D   D    + ++ E Y  R++S +  
Sbjct: 81  ----PAAAFLAEPVRRFSLDRSDFEAIIDGMLMDVEEDIRAPEWEKLEIYCDRVASAVGR 136

Query: 153 LATMIL------DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           L+          +SE  +    +  + G A  +  ++  L     RG+LY P + L   G
Sbjct: 137 LSVRAFGLVDDGESELPTGPKLLAHHLGRALQLTNILRDLDEDAARGRLYLPREALAEAG 196

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLK 265
           ++  +  +  +   +            ++  +A   M  +        ++  +   S+L 
Sbjct: 197 VENLAPHAALSHPALGDVCAPVLHRAREHYEQADLVMAGMPKAAVKAPYLMSAGYRSILD 256

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                GF         +++         ++ 
Sbjct: 257 RLATRGFAPPRAPVHMSRMKLIGAYFRHALT 287


>gi|163857475|ref|YP_001631773.1| putative phytoene synthase related protein [Bordetella petrii DSM
           12804]
 gi|163261203|emb|CAP43505.1| putative phytoene synthase related protein [Bordetella petrii]
          Length = 274

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 83/271 (30%), Gaps = 8/271 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
           D   +  +A LL P   R  ++ +Y +      + D       + +  L  ++       
Sbjct: 4   DHYENFPVASLLLPRRLRGPVTDIYRYARAADDIADEGDASDAQRLAGLAAFRAELHRIG 63

Query: 89  KGLIAESISP-----FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
               +   +          L   + ++ LP   F D++ A   D       D      Y 
Sbjct: 64  AEPGSAPDAAPELAHIFAPLARTIARHQLPITPFYDLLSAFEQDVTVKRYDDYAALLDYC 123

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R ++ +  L   + D+     +L           +      + + + + ++Y P   + 
Sbjct: 124 TRSANPVGRLMLHLYDAATPD-NLAESDAICTGLQLVNFWQDVRVDWRKQRIYLPRADMQ 182

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
             G+  +   + + + +    +    E     L       R +   +      V      
Sbjct: 183 RHGVTEDDLAACRLTPQWRALMACQVERARALLHSGAPLARRLPGRIGLELRMVVQGGLR 242

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +L+  +++G+ +  +         P  +  +
Sbjct: 243 ILERIEHNGYDVFLNRPELRARDWPIILWRA 273


>gi|240138463|ref|YP_002962935.1| putative phytoene synthase [Methylobacterium extorquens AM1]
 gi|240008432|gb|ACS39658.1| putative phytoene synthase [Methylobacterium extorquens AM1]
          Length = 283

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 85/262 (32%), Gaps = 7/262 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  L P   R ++  +Y F   +  V D       R   L  W+   ++   G   
Sbjct: 24  SFYTAMRLLPKERREAMYAVYAFCRVVDDVADDGGPREVRAAELDRWRADIDALYAGHPP 83

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYAFRISSRLIH 152
             + P    L   +R++DL  + F  +I+    D+  D +     + + Y  R++S +  
Sbjct: 84  ARVKP----LEEPMRRFDLKREDFQAVIDGMAMDAEEDIVAPSEAKLDLYCDRVASAVGR 139

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I              + G A  +  ++  +     RG+LY P++    +GL   + 
Sbjct: 140 LSVRIFGMPEADGIRLAW-HQGRALQLTNILRDIDEDAERGRLYLPMEKFHKIGLMNPTP 198

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            S     R+       A    ++  +    +          A +  +     L      G
Sbjct: 199 QSALAHPRLGEVCAAVAAEAQEHYRQTWAIIERSPRRATKAARLMAAAYRLYLDAVVKRG 258

Query: 272 FKIVSHSHTPNQLVRPWYMLSS 293
           +        P +       L  
Sbjct: 259 WAAPRARVKPGKFPLLLVALRH 280


>gi|317407372|gb|EFV87337.1| phytoene synthase [Achromobacter xylosoxidans C54]
          Length = 276

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 83/272 (30%), Gaps = 9/272 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
           D   +  +A LL P   R +++ LY F      + D    +   R  +L  ++       
Sbjct: 4   DHYENFPVASLLLPRRLRGAVTDLYRFARAADDIADEGAASDDERLAQLAAFRAELHRIG 63

Query: 89  KGLIAESI------SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               A         +   V L + + ++ LP   F D++ A   D       D      Y
Sbjct: 64  AEPGAVPAPGAPELAGIFVPLAATIARHQLPITPFYDLLSAFEQDISVKRYDDYATLADY 123

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             R ++ +  L   + D+       +          +      + + +H+ ++Y P + L
Sbjct: 124 CTRSANPVGRLMLHLFDATDPRDVEQ-SDAICTGLQLVNFWQDVRVDWHKHRVYLPQEDL 182

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE- 261
               +  E   + + +      +    E     L       R +   +      V     
Sbjct: 183 NRFDVSEEDLAACRLTPGWRALMAFEVERARALLHFGAPLARRLPGRIGLELRLVVQGGL 242

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            VL+  +  G+ +  +            +  S
Sbjct: 243 RVLERIEASGYDVFMNRPELGAKDWAIMLWRS 274


>gi|170690911|ref|ZP_02882077.1| squalene synthase HpnD [Burkholderia graminis C4D1M]
 gi|170144160|gb|EDT12322.1| squalene synthase HpnD [Burkholderia graminis C4D1M]
          Length = 282

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 89/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAAQRDAMYQVYAFCRAVDDIADSDLPRADRAAALERWRADIDACYAGAPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S       L   +  + L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  AS----LRALTRHIHTFHLQREDFHAMIDGMAMDAAGDICAPDEATLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I   +     L    + G A  +  ++  +       + Y P ++L   G+  E+ 
Sbjct: 139 LSVRIFGMQEEPGRLL-AHHLGRALQLTNILRDIDEDAGINRCYLPRELLAREGIAVENP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
               +   +       AE    +   +   M +     V    I   +   +L+     G
Sbjct: 198 TQIADDPSLPRVCATLAERAKAHFAASDAIMDHEPRSHVRAPRIMSGVYRVLLERTLERG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F I     +  +L   W +   ++
Sbjct: 258 FDIPRTKVSKPKLRLLWIVARYAL 281


>gi|312138398|ref|YP_004005734.1| phytoene synthase [Rhodococcus equi 103S]
 gi|325674606|ref|ZP_08154293.1| phytoene synthase [Rhodococcus equi ATCC 33707]
 gi|311887737|emb|CBH47049.1| phytoene synthase [Rhodococcus equi 103S]
 gi|325554192|gb|EGD23867.1| phytoene synthase [Rhodococcus equi ATCC 33707]
          Length = 328

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 88/296 (29%), Gaps = 19/296 (6%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV----RDTARN 69
           +                     +LA  L P   R  +  LY F   +  V     D+   
Sbjct: 8   DPSLHAAYRLCRTLNARHGKTYFLATRLLPTSRRAGVHALYGFARMVDDVVDVGADSGIA 67

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMIEAHF 125
           P  R       +      T      S           L     +YD+P++Y    + +  
Sbjct: 68  PTDRAAAAALDELEARVRTVLAGGVSGHAETDLVLSALADTTARYDIPHEYHYAFLHSMR 127

Query: 126 FDSYND-----SIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFI 179
            D               +   Y +  ++ +   +  ++  S     ++   +  G A  +
Sbjct: 128 MDIPGTAAFRSRYRTMAELSEYMYGSAAVIGLQMLPILGTSVPIDDAVGPARALGEAFQL 187

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS----GQNSDRISLAIKIFAELGLKY 235
              I  +     R ++Y P D L A G+D E        G+   R+  A+          
Sbjct: 188 TNFIRDMGEDLDRDRIYLPTDELAAFGVDEELLRRCRSTGRTDPRLGRALAHLVAHTRSV 247

Query: 236 LFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              A   +  + P   PA      +   +L+  ++ G++++      ++  R    
Sbjct: 248 YRAAEPGLDMLDPAARPAIRTAFVLYADILREVEDGGYRVLCERAVVSRRRRLAVA 303


>gi|186472964|ref|YP_001860306.1| squalene synthase HpnD [Burkholderia phymatum STM815]
 gi|184195296|gb|ACC73260.1| squalene synthase HpnD [Burkholderia phymatum STM815]
          Length = 290

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 7/263 (2%)

Query: 35  RYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAE 94
            YLA  + PP  R ++  +Y F   +  + D+      R   L+ W+   ++   G    
Sbjct: 32  FYLAMRILPPAQRDAMYQVYAFCRAVDDIADSDLPRAERAAGLERWRADIDACYAGSPRA 91

Query: 95  SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIHL 153
           S     +EL   +  + L  + F  MI+    D+  D    D    + Y  R++S    L
Sbjct: 92  S----LLELTRHIHTFHLQREDFHAMIDGMAMDAATDICAPDEATLDLYCDRVASAAGRL 147

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
           +  I   +          + G A  +  ++  +       + Y P ++L   G+   S L
Sbjct: 148 SVRIFGMQEQPGIEL-SHHLGRALQLTNILRDIDEDAQINRCYLPYELLAREGIATSSPL 206

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHGF 272
           +  +   +       AE   ++   A   M       V    I   +   +L+     GF
Sbjct: 207 TIADDPSLPRVCATLAERAKQHFAAADAIMDAQPRAQVKAPRIMSGVYRVLLERTLERGF 266

Query: 273 KIVSHSHTPNQLVRPWYMLSSSI 295
            I     +  +L     +   ++
Sbjct: 267 DIPRTKVSKPKLRMLAIVARYAL 289


>gi|195996699|ref|XP_002108218.1| hypothetical protein TRIADDRAFT_52473 [Trichoplax adhaerens]
 gi|190588994|gb|EDV29016.1| hypothetical protein TRIADDRAFT_52473 [Trichoplax adhaerens]
          Length = 296

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 109/296 (36%), Gaps = 40/296 (13%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           +  T N R+++     +  + +  +R  D++ YL  LL P   R S+  +  F+ E +++
Sbjct: 41  RQFTSNERRDDG---SNVSYCMNLVRKHDFENYLTTLLLPKDSRNSVFAIRAFNLETIKI 97

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
           +D    P T +MR+++W    ES  K        P ++EL+    +  L   +F  +++ 
Sbjct: 98  KDIISQPGTGEMRIKFWASAIESIYKNEP--PQHPIAMELMKAKDKNHLSKMWFNRLVKE 155

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                 +    + ++ E Y     S +++L    L      +      + G A  I  L+
Sbjct: 156 RKRRLDDSPYRNLEELEAYCENTVSSILYLILESLGIRCSHS-DHAASHIGKAYGIVILL 214

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +P H  +G++Y P DIL                                    AR   
Sbjct: 215 RAVPFHAKKGKVYLPSDILIK----------------------------------ARSIK 240

Query: 244 RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + +       F+   I +  L+  Q   F +   +      + P  +L   ++  +
Sbjct: 241 KDVSRKAVAGFLCSVICQKYLRDLQFVDFDVFHPNLQERAPLLPVQLLIQRLRGVY 296


>gi|86748847|ref|YP_485343.1| squalene/phytoene synthase [Rhodopseudomonas palustris HaA2]
 gi|86571875|gb|ABD06432.1| Squalene/phytoene synthase [Rhodopseudomonas palustris HaA2]
          Length = 279

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 90/264 (34%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D+      R   LQ W+D  ++  +G   
Sbjct: 20  SFYAAMRILPRPQREAMFQVYSFCRYVDDIADSDEPRDLRAAGLQRWRDDIDALYRGAPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   +    V+ + L  + FL +I+    D   D    +    + Y  R++S +  
Sbjct: 80  ----PRLADYQGSVQAFGLKREDFLAIIDGMEMDVTADIRAPEDATLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I         L +  + G A  +  ++  +      G+LY P + L A G+     
Sbjct: 136 LSVRIFGLPEQDGIL-LAHHLGRALQLTNILRDIDEDAGLGRLYLPREGLLAAGITSVDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +           LK+   A E M       V    I      S+L+     G
Sbjct: 195 ATVAADPAVPNVCAPLVARALKHFDAADEVMSRNPRRVVKAPRIMGKYYYSILQLLIARG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +  +   +L  +I
Sbjct: 255 FAPPRTPVKLGKAAKIAILLQYAI 278


>gi|2224841|emb|CAA52097.1| squalene desaturase [Staphylococcus aureus subsp. aureus str.
           Newman]
          Length = 255

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 84/254 (33%), Gaps = 1/254 (0%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
             +   +  +  + ++        A  L P   R ++  +Y    ++    D   +    
Sbjct: 1   MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFL 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
               +  + I +   +    +S     + L  + +  ++  Q F ++I+  + D +    
Sbjct: 61  IQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMF 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   +   
Sbjct: 121 ETDAELFGYCYGVAGTVSEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFDNE 180

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++YF    L    +D         ++      + +A +  K      ++++    +  P 
Sbjct: 181 RIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEASPI 240

Query: 254 F-IPVSITESVLKH 266
             +   I   +L  
Sbjct: 241 IELAARIYIEILGR 254


>gi|114707237|ref|ZP_01440135.1| hypothetical protein FP2506_05001 [Fulvimarina pelagi HTCC2506]
 gi|114537433|gb|EAU40559.1| hypothetical protein FP2506_05001 [Fulvimarina pelagi HTCC2506]
          Length = 275

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 4/270 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             + D D DR L+ L +PP  R +LS LY F  E  RVRD    P+  ++RLQWW+D+  
Sbjct: 9   ALVEDQDRDRTLSLLFAPPEKRGALSALYAFDIETSRVRDMVSQPLPGEIRLQWWRDLIS 68

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
           S  K   + S  P + ELL ++ +YDLP   F   +EA  FD Y+D       FE YA  
Sbjct: 69  SGAK---SGSGHPIADELLEVIDRYDLPRSAFERYLEARIFDLYDDPFPTTGDFEAYAGE 125

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
             S LI LA M+           V  +AG++  +  ++  LP    RGQ+  P+D+L A 
Sbjct: 126 TRSTLIMLAAMVFSKRGAERIGDVAGHAGVSSSVASVLRSLPKTRSRGQVLVPVDLLTAA 185

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
           G   E FLSG  + R   AI  F   G  +  + R  ++ +   +  A +P S+ E    
Sbjct: 186 GCTTEEFLSGNQAAR-QQAILAFCAYGRDHDTRWRSLLKSVPKPMRCAVLPASLAEFTFD 244

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            A+    +I S +   + L + W    +  
Sbjct: 245 AAEKAPDRIESRTAEISPLRKSWRYWRTMR 274


>gi|16519643|ref|NP_443763.1| squalene synthase; HpnD [Sinorhizobium fredii NGR234]
 gi|2499978|sp|P55350|Y4AC_RHISN RecName: Full=Putative phytoene synthase
 gi|2182292|gb|AAB91601.1| squalene synthase; HpnD [Sinorhizobium fredii NGR234]
          Length = 279

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 90/265 (33%), Gaps = 7/265 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YL     PP+ R ++  +Y F  ++  + D+      R   LQ W+D  ++  + +  
Sbjct: 19  SFYLGMRTLPPVQREAIFQIYSFCRQVDDIADSDEPREHRLAALQQWRDHIDALYQCVPP 78

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   + L+ V  + L  + FL +++    D   D         + Y  R++S +  
Sbjct: 79  ----PRLKDYLASVTTFGLKREDFLAVVDGMEMDVLQDIRAPKMATLDLYCDRVASAVGR 134

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           ++  +           +  + G A  +  ++  +      G+LY P + L   G+     
Sbjct: 135 MSVRVFGLSEEDGIA-LAHHLGRALQLTNILRDIDEDAGLGRLYIPRESLDHAGITSSDP 193

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
                   +  A    A+  + +  ++ E M       V    I      ++L      G
Sbjct: 194 HKVIADKALPKACAPLAQRAMMHFAESDEIMNCNPRRIVRAPTIMSKCYRAILDLLLIRG 253

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIK 296
           F           L +   +   ++ 
Sbjct: 254 FAAPREPVRVTNLTKRAILFRYALM 278


>gi|317057973|gb|ADU90691.1| putative phytoene/squalene synthase [Collimonas sp. MPS11E8]
          Length = 270

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 86/268 (32%), Gaps = 5/268 (1%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTK 89
              +  +A +L P   R ++  +Y F      + D    +P  R   L  ++   +   +
Sbjct: 5   HYENFPVASILMPARLRPAVKAIYAFARSADDIADEGDASPDQRLRALNAYEAALDRIEQ 64

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
              AES  P  + L  ++  Y LP   F D++ A   D              Y  R ++ 
Sbjct: 65  QQAAES--PLFLALHEVITAYGLPLAPFRDLLSAFKQDVITTRYSQFAGLLDYCRRSANP 122

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           +  L   +  +     +LR       A  +      + I + + ++Y PL+ L   G+ +
Sbjct: 123 VGALMLHLYGAAS-EQNLRDSDAICSALQLINFWQDVAIDWDKARIYLPLEDLQRFGVSQ 181

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHAQ 268
                G         ++   +     +  A+     +   +      V      +L+  +
Sbjct: 182 AQLADGAVDHAWRRLMEFEVQRARAMMTGAQALALRLPGRIGWELRLVVQGGLRILELLE 241

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +  + +       ++         +   
Sbjct: 242 SAQYDMFRQRPKLHKADWLLLAWRALRM 269


>gi|91780056|ref|YP_555264.1| putative squalene/phytoene synthase [Burkholderia xenovorans LB400]
 gi|91692716|gb|ABE35914.1| putative squalene/phytoene synthase [Burkholderia xenovorans LB400]
          Length = 306

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 86/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 47  SFYLAMRILPAAQRDAMYQVYAFCRAVDDIADSDMPRAERAAALERWRADIDACYAGAPR 106

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S       L   +  + L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 107 TS----LRALTRHIHTFHLQREDFHAMIDGMAMDAAADICAPDEATLDLYCDRVASAAGR 162

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I   +     L    + G A  +  ++  +       + Y P ++L   G+   S 
Sbjct: 163 LSVRIFGMQDEPGRLL-AHHLGRALQLTNILRDIDEDAGINRCYLPHELLAREGIAVTSP 221

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
               +   +       AE   ++   +   M       V    I   +   +L+     G
Sbjct: 222 TQIADDPSLPRVCATLAERARQHFAASDAIMDREPRSQVRAPRIMSGVYRVLLERTLERG 281

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F I        +L   W +   + 
Sbjct: 282 FDIPRTKVRKPKLRMLWIVARYAF 305


>gi|163851369|ref|YP_001639412.1| squalene synthase HpnD [Methylobacterium extorquens PA1]
 gi|163662974|gb|ABY30341.1| squalene synthase HpnD [Methylobacterium extorquens PA1]
          Length = 283

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 85/262 (32%), Gaps = 7/262 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  L P   R ++  +Y F   +  V D       R   L  W+   ++   G   
Sbjct: 24  SFYTAMRLLPKERREAMYAVYAFCRVVDDVADDGGPREVRAAELDRWRADIDALYAGHPP 83

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYAFRISSRLIH 152
             + P    L   +R++DL  + F  +I+    D+  D +     + + Y  R++S +  
Sbjct: 84  ARVKP----LEEPMRRFDLKREDFQAVIDGMAMDAEEDIVAPSEAKLDLYCDRVASAVGR 139

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I              + G A  +  ++  +     RG+LY P++    +GL   + 
Sbjct: 140 LSVRIFGMPEADGIRLAW-HQGRALQLTNILRDIDEDAERGRLYLPMEKFHKIGLMNPTP 198

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            S     R+       A    ++  +    +          A +  +     L      G
Sbjct: 199 QSALAHPRLGEVCAAVAAEAEEHYRQTWAIIERSPRRATKAARLMAAAYRLYLDAVVKRG 258

Query: 272 FKIVSHSHTPNQLVRPWYMLSS 293
           +        P +       L  
Sbjct: 259 WAAPRARVKPGKFPLLLVALRH 280


>gi|237748312|ref|ZP_04578792.1| squalene/phytoene synthase [Oxalobacter formigenes OXCC13]
 gi|229379674|gb|EEO29765.1| squalene/phytoene synthase [Oxalobacter formigenes OXCC13]
          Length = 284

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 80/270 (29%), Gaps = 5/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
           +   +  +A +L P   R  +  +Y F      + D     P  R   L  +    ++  
Sbjct: 17  EHYENFPVASILLPSNLRKPVEVIYAFARSADDIADEGDFRPEERLAALSGYIAELDTIE 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +       S   ++L  ++ ++ LP   F +++ A   D              Y    ++
Sbjct: 77  RN--GHPDSKLFIDLKQVIGEFRLPLAPFRNLLAAFIQDISTKRYETYDDLLDYCRLSAN 134

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +        + R+      +  +      + I + + ++Y PL+ L    + 
Sbjct: 135 PVGLLMLHLY-EAATEENKRMSDAICTSLQLINFWQDIAIDWKKDRIYLPLEELARFNVT 193

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
                +G  SD     ++   +   K +         +   +      V      +L   
Sbjct: 194 ASDIATGNLSDNWRSLMQFEIDRTRKLMLSGAPLASRLPGRIGWELRLVVQGGLRILDRI 253

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +     I +             +     +K
Sbjct: 254 EMAACDIFNKRPLLQGGDWLSIIWQCLKRK 283


>gi|296158640|ref|ZP_06841470.1| squalene synthase HpnD [Burkholderia sp. Ch1-1]
 gi|295891208|gb|EFG70996.1| squalene synthase HpnD [Burkholderia sp. Ch1-1]
          Length = 282

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 86/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAAQRDAMYQVYAFCRAVDDIADSDMPRAERAAALERWRADIDACYAGAPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S       L   +  + L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  TS----LRALTRHIHTFHLQREDFHAMIDGMAMDAAADICAPDEATLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I   +     L    + G A  +  ++  +       + Y P ++L   G+   S 
Sbjct: 139 LSVRIFGMQDEPGRLL-AHHLGRALQLTNILRDIDEDAGINRCYLPHELLAREGIAVTSP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
               +   +       AE   ++   +   M       V    I   +   +L+     G
Sbjct: 198 TQIADDPSLPRVCATLAERARQHFAASDAIMDREPRSQVRAPRIMSGVYRVLLERTLERG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F I        +L   W +   + 
Sbjct: 258 FDIPRTKVRKPKLRMLWIVARYAF 281


>gi|154253480|ref|YP_001414304.1| putative phytoene synthase [Parvibaculum lavamentivorans DS-1]
 gi|154157430|gb|ABS64647.1| putative phytoene synthase [Parvibaculum lavamentivorans DS-1]
          Length = 281

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 9/286 (3%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           ++  S      L  +R  D+DR+L  L +P   R+SL  LY F+ E+ RV +    P+  
Sbjct: 3   DEAMSVSMKTSLDEVRRYDHDRFLTLLFAPMPQRLSLIALYAFNLEIARVAENVTEPMMG 62

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
            +RLQWW++  E    G            + + V + DL       +I+A   D   D  
Sbjct: 63  HIRLQWWRETLEGLPNGETRG------HAVAAAVAEADLKIPRLQALIDARERDLSEDVF 116

Query: 134 FDCKQFEHYAFRISSRLIHLATM-ILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
            D    + YA + S+ ++ +A   +   E+  A+   I++AGIA  +  L+  LP+H  +
Sbjct: 117 EDVAMLDSYAEKTSAAVMDIAARALGGEEKADAAADAIRHAGIAYALTGLLRALPVHASQ 176

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+L  P D+L    +D  + L+G+ ++ +   I+  A+    +L  AR  M +  P + P
Sbjct: 177 GRLTMPADVLLRCNVDPHTVLAGEMTEGLRAVIQDVADHARSHLSAAR--MAHFDPQLLP 234

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           A +P S+ +  L      GF             R   +L  + +K+
Sbjct: 235 ALMPASLCDRYLDMMTAPGFDPFRDRTDVPAFRRQLRLLGRNFRKK 280


>gi|330991439|ref|ZP_08315390.1| Putative phytoene synthase [Gluconacetobacter sp. SXCC-1]
 gi|329761458|gb|EGG77951.1| Putative phytoene synthase [Gluconacetobacter sp. SXCC-1]
          Length = 291

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 101/279 (36%), Gaps = 8/279 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR-DTARNPITRDMR 76
           S D   V + +            + PP  R  +  +Y F   +  V  D   +P  R  R
Sbjct: 15  SADLAEVEQIVVRSGTSFGKGMRILPPDRRYGMYAVYAFCRLVDDVADDELGDPADRSRR 74

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN-DSIFD 135
           L+ W+            E+       L++ +R++DL  Q F D+I+    D+       D
Sbjct: 75  LEAWRARIARLYA---GEAHDGIDRVLMATIRRFDLRQQDFNDVIDGMEMDASGPVVAPD 131

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
              F+ Y  R++S +  L+  +      SA      + G A  I  ++  +      G+L
Sbjct: 132 EATFDLYCDRVASAVGRLSVRVFGDASPSADQVAY-HLGRALQITNILRDVAEDARLGRL 190

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAF 254
           Y P D+L   G+  E   +   + R+    +I A     +   A   M         PA 
Sbjct: 191 YLPRDLLERFGIPPE-PEAVMRAPRLGQVGRILAGRAHDHFRAAAAAMARCDHTAMRPAR 249

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +  +   ++L   +  G+       + ++  +    L +
Sbjct: 250 LMGATYAAILAAQERQGWGTPERRVSLSRPRKLLIALRA 288


>gi|75676456|ref|YP_318877.1| squalene/phytoene synthase [Nitrobacter winogradskyi Nb-255]
 gi|74421326|gb|ABA05525.1| squalene/phytoene synthase [Nitrobacter winogradskyi Nb-255]
          Length = 278

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 94/264 (35%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D+ R    R   LQ W+D  ++  +G   
Sbjct: 19  SFYAAMRILPRAQREAMFQIYTFCRYVDDIADSDRPRSERQAALQQWRDDIDALYQGRAP 78

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD-SYNDSIFDCKQFEHYAFRISSRLIH 152
           E       + ++ V  + +  + FL +I+    D   +    +    + Y  R++S +  
Sbjct: 79  ER----LRDYVASVDAFGMRREDFLAVIDGMEMDVLADIRAPEEATLDLYCDRVASAVGR 134

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  +         L +  + G A  +  ++  L      G+LY P + L   G+D    
Sbjct: 135 LSVRVFGLPEQDGIL-LSHHLGRALQLTNILRDLDEDAAIGRLYVPREELLRAGIDCTDP 193

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            +  +S  I        E    +  ++ E M            I      ++L   +  G
Sbjct: 194 AAVISSPAIPEVCVRLMERARTHFVESDEIMNRNARRAVRAPRIMSKYYHAILDLLEERG 253

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F+        +   +   +L  ++
Sbjct: 254 FQPPRSPVRVSYAAKIAIVLRYAL 277


>gi|209964365|ref|YP_002297280.1| fusion protein of y4aC and y4aD, putative [Rhodospirillum centenum
           SW]
 gi|209957831|gb|ACI98467.1| fusion protein of y4aC and y4aD, putative [Rhodospirillum centenum
           SW]
          Length = 578

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 84/268 (31%), Gaps = 8/268 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y      P   R ++  +Y F  ++  + D       +   L  W+   ++       
Sbjct: 307 TFYWPLRFLPAAKRRAMFAVYAFCRQVDDIADEPGPLEAKRAALSDWRRRLDAVYGDEGG 366

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   +L   VR Y LP   F  +++    D          +    Y  R++  +  
Sbjct: 367 -IADPLLRDLAEAVRHYALPRAEFDAIVDGMAMDLEGPIRAPSQEDLTLYCRRVAGAVGM 425

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE-- 210
           LA  +          R     G A  +  ++  L      G+LY P + L   GL  +  
Sbjct: 426 LAVRV-FGSPDDRHDRFAIALGEALQLTNILRDLTEDAALGRLYLPREALAQAGLLSDGT 484

Query: 211 --SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITESVLKHA 267
                +      ++   +  A        +A+E +       ++PA   + +   +L   
Sbjct: 485 EVEPAAVLADPAVARVCESVAARADARFVEAQEALPRQDCRMLWPAVAMMLLYRRLLDRM 544

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              G+  ++      +  +    L  +I
Sbjct: 545 TARGWSELADRPVLTRREKVMTALRCAI 572



 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 75/263 (28%), Gaps = 11/263 (4%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKGLI 92
           +  +A  L P   R  +   Y F      + D    +P  +  +L   +    S      
Sbjct: 26  NFPVASRLVPKHLRPHVMAFYAFVRLADDIADDPNLDPEMKIAQLDALERALVSGIGAQT 85

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
             +    +++L + +    +   +   M++A   D++            Y    ++ +  
Sbjct: 86  WLAP---ALQLKASLAATGVSGLHARQMLQAFRRDAHCGRCKQWADLLLYCRYSANPVGR 142

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRES 211
               +      +A          A  I   +      +   G+ Y P       G D E 
Sbjct: 143 YLLELHGEPMAAAPA--ADALCSALQIINHLQDCRTDWVDLGRCYLPTTWFREAGGDPEQ 200

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKHAQN 269
            +    +  +   I    +     L +A    R I          V   +  S+ +  + 
Sbjct: 201 LVETAATPAVRAVIDRCLDEVDALLLRADTLPRQIADRGLRLETAVIIRLARSLARELRR 260

Query: 270 HGFKIVSHSHTPNQLVRPWYMLS 292
                ++       +V+   +L 
Sbjct: 261 R--DPLAERIELKGMVKLGAVLR 281


>gi|163759438|ref|ZP_02166523.1| putative phytoene synthase protein [Hoeflea phototrophica DFL-43]
 gi|162283035|gb|EDQ33321.1| putative phytoene synthase protein [Hoeflea phototrophica DFL-43]
          Length = 291

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 91/273 (33%), Positives = 151/273 (55%), Gaps = 2/273 (0%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             LR +D DRYLA LL P   +  ++ L  F+ E+  +RD  R P+  ++RLQWW+++ +
Sbjct: 20  EALRAVDIDRYLALLLVPEAAQDDIATLLLFNAEIAAIRDRIREPLPGEIRLQWWREVLD 79

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
              + L      P + +LL ++ +  LP      M EA  FD Y+D + D   +E YA  
Sbjct: 80  G--ERLGEAEAHPLASQLLELIARRRLPLSPLAGMCEARVFDLYDDPMPDRSSYEGYAGE 137

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            +S L+ L+  +LD++  + +     +AG+AQ +   +  LPI   RGQ++ P D+L A 
Sbjct: 138 TASALLQLSAFLLDADASAKTATASGHAGVAQAVAGHLMLLPISQARGQVFIPGDLLAAT 197

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
           GLDR+S L+G+N   I  A++ FA  G  +L KA + +R +  ++ PA++P+++ E VLK
Sbjct: 198 GLDRDSLLAGENRKAIDAAVRAFAGFGRDHLSKAHDALRDVASEMRPAYLPMALVEPVLK 257

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            A+  G   +  S  P+Q  R W +  ++   R
Sbjct: 258 RAETLGSGCMETSPRPSQWRRQWRLWRAARSGR 290


>gi|288922393|ref|ZP_06416583.1| squalene synthase HpnD [Frankia sp. EUN1f]
 gi|288346264|gb|EFC80603.1| squalene synthase HpnD [Frankia sp. EUN1f]
          Length = 300

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 85/286 (29%), Gaps = 11/286 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
              +          R+   +      L P   R +LS +Y     L  + D       + 
Sbjct: 9   STVAEAYASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDIGDGDLPAEEKL 68

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L   +    +        S  P  V L    R++ +P + F+++ +    D +  +  
Sbjct: 69  AGLAKVRADIRALDTN----SSDPVMVALADTARRFPIPIEAFIELTDGVESDVHGATYE 124

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYH 191
             +    Y   ++  +  L+  I   E  +   R   +    G+A     ++  +     
Sbjct: 125 TFEDMVGYCRLVAGTIGRLSLGIFGLEGSAGDARAAEIADALGVALQQTNILRDVREDLL 184

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQ---NSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            G++Y P   L   G+      +G+     D +   ++  A    ++  +    +  +  
Sbjct: 185 NGRIYLPSTELEKAGVTLTVDAAGRLGAPEDALVDYLRDCAVRADEWYARGLALLGLLDR 244

Query: 249 DVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                      I   + +  +     ++    +     +      S
Sbjct: 245 RSAACCGAMAGIYLRLNRRIRQDPTAVLERRLSLPGWEKAVVAARS 290


>gi|83718303|ref|YP_440548.1| phytoene synthase [Burkholderia thailandensis E264]
 gi|83652128|gb|ABC36192.1| phytoene synthase, putative [Burkholderia thailandensis E264]
          Length = 397

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 138 SFYLAMRILPAEQRDAMFHVYAFCRAVDDIADEGGPRAERAAQLDRWRADIDDCYAGKPR 197

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 198 ASLVPLARE----IGKFGLHREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 253

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 254 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAMINRCYLPRELLAREGIAITDP 312

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHAQNHG 271
            +     ++        E   ++  +A   M       V    I       +L+ A   G
Sbjct: 313 QTIARDPKLPRVCATLVERAQQHFAQADAVMDGARRTQVRAPRIMSGAYRLILEAAVARG 372

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 373 FAPPRAPLRKPRARMLLLAARYAL 396


>gi|33592349|ref|NP_879993.1| putative phytoene synthase [Bordetella pertussis Tohama I]
 gi|33602248|ref|NP_889808.1| putative phytoene synthase [Bordetella bronchiseptica RB50]
 gi|33571994|emb|CAE41516.1| putative phytoene synthase [Bordetella pertussis Tohama I]
 gi|33576687|emb|CAE33764.1| putative phytoene synthase [Bordetella bronchiseptica RB50]
          Length = 276

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 86/272 (31%), Gaps = 9/272 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESS- 87
           D   +  +A LL P   R +++ +Y F      + D         +R L  ++       
Sbjct: 4   DHYENFPVASLLLPRRLRGAVTDIYRFARAADDIADEGAAEDAERLRQLAAFRAELHRIG 63

Query: 88  -----TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                     +  ++P    L + + ++ LP   F D++ A   D              Y
Sbjct: 64  AEPGTLAVPASADLAPIFTPLAATIARHQLPITPFFDLLSAFEQDISVKRYESHDDLLDY 123

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             R ++ +  L   +       A+LR          +      + I + + ++Y P + L
Sbjct: 124 CRRSANPVGRLMLHLY-GAVDEANLRDADAICTGLQLVNFWQDVRIDWRKQRVYLPEEDL 182

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE- 261
              G+ R+   + + + +    +    +     L       R +   +      V     
Sbjct: 183 RRHGVSRDDLAACRLTPQWRELMAFEVQRTRALLHSGAALPRRLPGRIGLELRLVVQGGL 242

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +L+  ++ G+ +  +            +  +
Sbjct: 243 RILQRIEDAGYDVFMNRPELGAKDWAVMLWRA 274


>gi|218530177|ref|YP_002420993.1| squalene synthase HpnD [Methylobacterium chloromethanicum CM4]
 gi|218522480|gb|ACK83065.1| squalene synthase HpnD [Methylobacterium chloromethanicum CM4]
          Length = 283

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 86/271 (31%), Gaps = 7/271 (2%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              L       Y A  L P   R ++  +Y F   +  V D       R   L  W+   
Sbjct: 15  AAALPAAGSSFYTAMRLLPKERREAMYAVYAFCRVVDDVADDGGPREVRAAELDRWRADI 74

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYA 143
           ++   G     + P    L   +R++DL  + F  +I+    D+  D +     + + Y 
Sbjct: 75  DALYAGHPPARVKP----LEEPMRRFDLKREDFQAVIDGMAMDAEEDIVAPSEAKLDLYC 130

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R++S +  L+  I              + G A  +  ++  +     RG+LY P++   
Sbjct: 131 DRVASAVGRLSVRIFGMPEADGIRLAW-HQGRALQLTNILRDIDEDAERGRLYLPMEKFH 189

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITES 262
            +GL   +  S     R+       A    ++  +    +          A +  +    
Sbjct: 190 KIGLMNPTPQSALAHPRLGEVCAAVAAEAEEHYRQTWAIIERSPRRATKAARLMAAAYRL 249

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            L      G+        P +       L  
Sbjct: 250 YLDAVVKRGWAAPRARVKPGKFPLLLVALRH 280


>gi|194098380|ref|YP_002001438.1| putative transferase [Neisseria gonorrhoeae NCCP11945]
 gi|240112715|ref|ZP_04727205.1| putative transferase [Neisseria gonorrhoeae MS11]
 gi|240117756|ref|ZP_04731818.1| putative transferase [Neisseria gonorrhoeae PID1]
 gi|240125561|ref|ZP_04738447.1| putative transferase [Neisseria gonorrhoeae SK-92-679]
 gi|254493574|ref|ZP_05106745.1| transferase [Neisseria gonorrhoeae 1291]
 gi|260440727|ref|ZP_05794543.1| putative transferase [Neisseria gonorrhoeae DGI2]
 gi|268598781|ref|ZP_06132948.1| transferase [Neisseria gonorrhoeae MS11]
 gi|268601140|ref|ZP_06135307.1| transferase [Neisseria gonorrhoeae PID18]
 gi|268603458|ref|ZP_06137625.1| transferase [Neisseria gonorrhoeae PID1]
 gi|268684152|ref|ZP_06151014.1| transferase [Neisseria gonorrhoeae SK-92-679]
 gi|291044037|ref|ZP_06569753.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|193933670|gb|ACF29494.1| putative transferase [Neisseria gonorrhoeae NCCP11945]
 gi|226512614|gb|EEH61959.1| transferase [Neisseria gonorrhoeae 1291]
 gi|268582912|gb|EEZ47588.1| transferase [Neisseria gonorrhoeae MS11]
 gi|268585271|gb|EEZ49947.1| transferase [Neisseria gonorrhoeae PID18]
 gi|268587589|gb|EEZ52265.1| transferase [Neisseria gonorrhoeae PID1]
 gi|268624436|gb|EEZ56836.1| transferase [Neisseria gonorrhoeae SK-92-679]
 gi|291012500|gb|EFE04489.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|317164076|gb|ADV07617.1| putative transferase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 275

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLVLPRRLRKPVHAVYAFARTADDMADEGSMPSEARLSGLEGLRRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D              Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGDLTDYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKRALWK 275


>gi|288802888|ref|ZP_06408325.1| phytoene synthase [Prevotella melaninogenica D18]
 gi|288334705|gb|EFC73143.1| phytoene synthase [Prevotella melaninogenica D18]
          Length = 272

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 91/277 (32%), Gaps = 24/277 (8%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           ++     Y A  + P   R ++  +Y F      + D+      R+  L+ ++  ++ + 
Sbjct: 11  QEYSTSFYAATDMFPADMRDAIHSIYGFVRIADEIVDSFHEHD-REKLLRDFERDYDEAY 69

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +     S +P        V+QY++P++Y    + +   D    S    ++   Y +  + 
Sbjct: 70  RM--GISTNPILYSFQWTVKQYNIPDEYIRSFLASMRCDLEKKSYETEEEIASYIYGSAD 127

Query: 149 RLIHLATMILDSER---YSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGA 204
            +  +   +        +    +     G A      +  L   Y   G+LYFP   L  
Sbjct: 128 VVGLMCLKVFCRADESLFERLKQPAMRLGSAFQKVNFLRDLREDYVLLGRLYFPGIALEG 187

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESV 263
                              A         +   +A E ++ +  +   P ++       +
Sbjct: 188 FD---------------EEAKNSLIREIHQDFCEAYEGIQQLPRESRLPVYVAYRYYRQL 232

Query: 264 LKHAQNHGFKIV-SHSHTPNQLVRPWYMLSSSIKKRF 299
           L   Q      + S       + +   +L++ +K +F
Sbjct: 233 LHIIQETPAPSLISKRVRVGDVQKMLILLTAVLKNKF 269


>gi|254561127|ref|YP_003068222.1| phytoene synthase [Methylobacterium extorquens DM4]
 gi|254268405|emb|CAX24362.1| putative phytoene synthase [Methylobacterium extorquens DM4]
          Length = 283

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 87/271 (32%), Gaps = 7/271 (2%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              L       Y A  L P   R ++  +Y F   +  V D       R   L  W+   
Sbjct: 15  AAALPAAGSSFYTAMRLLPKERREAMYAVYAFCRVVDDVADDGGPREVRAAELDRWRADI 74

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYA 143
           ++   G     + P    L   +R++DL  + F  +I+    D+  D +     + + Y 
Sbjct: 75  DALYAGHPPARVKP----LEEPMRRFDLKREDFQAVIDGMAMDAEEDIVAPSEAKLDLYC 130

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R++S +  L+  I              + G A  +  ++  +     RG+LY P++   
Sbjct: 131 DRVASAVGRLSVRIFGMPEADGIRLAW-HQGRALQLTNILRDIDEDAERGRLYLPMEKFH 189

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITES 262
            +GL   +  S     R+       A    ++  +    +          A +  +    
Sbjct: 190 KIGLMNPTPQSALAHPRLGEVCAAVAAEAEEHYRQTWAIIERSPRRATKAARLMAAAYRL 249

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            L      G+        P +L      L  
Sbjct: 250 YLDAVVKRGWAAPRARVKPGKLPLLLVALRH 280


>gi|15677374|ref|NP_274529.1| phytoene synthase-related protein [Neisseria meningitidis MC58]
 gi|7226765|gb|AAF41877.1| phytoene synthase-related protein [Neisseria meningitidis MC58]
 gi|316986017|gb|EFV64954.1| squalene synthase HpnC [Neisseria meningitidis H44/76]
          Length = 275

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 83/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELNGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKKALWK 275


>gi|330822054|ref|YP_004350916.1| Squalene/phytoene synthase family protein [Burkholderia gladioli
           BSR3]
 gi|327374049|gb|AEA65404.1| Squalene/phytoene synthase family protein [Burkholderia gladioli
           BSR3]
          Length = 297

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 87/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D   +   R   L  W+   ++   G   
Sbjct: 38  SFYRAMRILPAAQRDAMFQVYAFCRAVDDIADDGGSREERAAGLDRWRVDIDACYAGKPR 97

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P    L   +R++ L  + F DMI+    D+  D    D    + Y  R++S    
Sbjct: 98  ASLVP----LTEEIRKFGLKREDFHDMIDGMAMDAAEDICAPDDATLDLYCDRVASSAGR 153

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I   +       +  + G A  +  ++  +       + Y   ++L   G+     
Sbjct: 154 LSVRIFGMQEAPGIE-LAHHLGRALQLTNILRDIDEDADINRCYLSRELLEREGIPVTDP 212

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
           L+      +       AE  L +  +A   M       V    I       +L+ A   G
Sbjct: 213 LTIAAHPALPGVCATLAERALAHFARADAIMDGAPRAQVKAPRIMSGAYRCILEAAMARG 272

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +L      L  + 
Sbjct: 273 FAAPRAPLRKPRLRMMLIALRYAF 296


>gi|288958299|ref|YP_003448640.1| phytoene synthase [Azospirillum sp. B510]
 gi|288910607|dbj|BAI72096.1| phytoene synthase [Azospirillum sp. B510]
          Length = 311

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 86/274 (31%), Gaps = 11/274 (4%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
                    Y    L P   R ++  +Y F   +  + D    P  +   L  W+     
Sbjct: 32  VAAKSGSTFYWPMRLLPASKRAAMFAIYAFCRRIDDIADEPGEPTAKRAALDGWRRDIRD 91

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-------FDCKQF 139
                     +P +  L   + +Y LP      +I+    D   +          D    
Sbjct: 92  LYA--GGAPNTPLTAALKGAIDRYGLPRAELEALIDGMAMDVAAEDHGSRGMPAPDLDTL 149

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y  R++  +  LA  +       A+ R     G A  +  ++  L      G+LY P 
Sbjct: 150 RLYCRRVAGAVGMLAIRVFH-RADPATERFALALGEALQLTNILRDLAEDAGLGRLYLPR 208

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVS 258
           +IL   G+D +          +  A +  A+L      +AR  +        + A   + 
Sbjct: 209 EILRTAGIDDDRPAEVLAHPALPRACEAMADLAETRFAEARAAIAGQARGSLWAATAMMV 268

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           +   +L+  +  G++ +       +    W  L 
Sbjct: 269 LYHRLLRRLRAGGWRDLHARVRVGRRESAWVALR 302


>gi|32475805|ref|NP_868799.1| phytoene synthase [Rhodopirellula baltica SH 1]
 gi|32446348|emb|CAD76176.1| probable phytoene synthase [Rhodopirellula baltica SH 1]
          Length = 336

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 90/278 (32%), Gaps = 23/278 (8%)

Query: 35  RYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAE 94
            Y +  L P   R ++S LY F      + D       R   LQWW+     +  G  ++
Sbjct: 26  FYRSFWLLPRAKRDAMSALYAFARVTDDLGDCDEPLALRRSWLQWWRQTTAMNLIGEGSQ 85

Query: 95  S---------------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
                                  +     L     +Y +P++Y L++I+    D   +  
Sbjct: 86  PIRLADGVENIPPNSSVDLVRHATEIMPALRHAADRYQIPSRYLLEIIDGVMADQQKNRF 145

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
              +Q EHY + ++S +      I            +   G+A  +  ++  +     RG
Sbjct: 146 DTFEQLEHYCYLVASAVGIACLHIWGFRSPLPMQAAVD-CGLAFQLTNILRDVSEDAARG 204

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P       GL+ +  L+ +   R+   +        +           +  D  P 
Sbjct: 205 RIYLPRQHYEQHGLEEDDLLNPRKDARLRCLLLDETRRAAELFDSGWRVWDSLHDDGRPM 264

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           F +       +L+   +    +VS   +     R   +
Sbjct: 265 FSMMWRTYRKLLQRIIDDPDAVVSRRVSLGMRDRIGIV 302


>gi|325128603|gb|EGC51473.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           N1568]
          Length = 275

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L   +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLDALRRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELNGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKKALWK 275


>gi|319638139|ref|ZP_07992902.1| phytoene synthase-like protein [Neisseria mucosa C102]
 gi|317400412|gb|EFV81070.1| phytoene synthase-like protein [Neisseria mucosa C102]
          Length = 271

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 29/270 (10%), Positives = 83/270 (30%), Gaps = 6/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESSTK 89
              +  +  ++ P   R  +  +Y F      + D        R  +L   K   +   K
Sbjct: 5   HYENFPVGSIVLPRRLRKPVHAVYAFARTADDIADEGNAEAAERLHQLDELKSELDRIAK 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
               +  +     L +  +  + LP Q F D++ A   D       +  +   Y    ++
Sbjct: 65  --GGKPQTALMQRLYNEAIVPFQLPLQPFYDLLAAFSQDVVKTRYENFGELIAYCRLSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +       +  +       A  +      + + + +G++Y P + L    + 
Sbjct: 123 PVGRIMLHLYGQTDEVSMAQ-SDGICTALQLINFWQDVAVDWQKGRVYIPHEDLQKFKVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKHA 267
            E   +G+        +    +   + L       + +   +      + +    +L+  
Sbjct: 182 EEQIAAGKADFAFQRLMAHECQRAFQMLKAGSPLGKTLKGRIGFELRMIIVGGQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               + + +     ++      +  + +KK
Sbjct: 242 DGCKYDVFNQRPLLDKKDWMIIIKRALLKK 271


>gi|33596459|ref|NP_884102.1| putative phytoene synthase [Bordetella parapertussis 12822]
 gi|33566228|emb|CAE37136.1| putative phytoene synthase [Bordetella parapertussis]
          Length = 276

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 86/272 (31%), Gaps = 9/272 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESS- 87
           D   +  +A LL P   R +++ +Y F      + D         +R L  ++       
Sbjct: 4   DHYENFPVASLLLPRRLRGAVTDIYRFARAADDIADEGAAEDAERLRQLAAFRAELHRIG 63

Query: 88  -----TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
                     +  ++P    L + + ++ LP   F D++ A   D              Y
Sbjct: 64  AEPGTLAVPASADLAPIFTPLAATIARHQLPITPFFDLLSAFEQDISVKRYESHDDLLDY 123

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             R ++ +  L   +       A+LR          +      + I + + ++Y P + L
Sbjct: 124 CRRSANPVGRLMLHLY-GAVDEANLRDADAICTGLQLVNFWQDVRIDWRKQRVYLPEEDL 182

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE- 261
              G+ R+   + + + +    +    +     L       R +   +      V     
Sbjct: 183 RRHGISRDDLAACRLTPQWRELMAFEVQRTRALLHSGAALPRRLPGRIGLELRLVVQGGL 242

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +L+  ++ G+ +  +            +  +
Sbjct: 243 RILQRIEDAGYDVFMNRPELGAKDWAVMLWRA 274


>gi|90424270|ref|YP_532640.1| phytoene synthase [Rhodopseudomonas palustris BisB18]
 gi|90106284|gb|ABD88321.1| phytoene synthase [Rhodopseudomonas palustris BisB18]
          Length = 288

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 4/280 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           ++ F    +R+ D+DRY A L     +R +   L  F+ E++RVRD    P+  ++RLQW
Sbjct: 11  NAAFCADLVRNHDFDRYAATLFLDAEHRRAALALAAFNVEIVRVRDQVSQPLPGEIRLQW 70

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W D+             +P + EL   + +Y LP      +IEAH FD YND + D   F
Sbjct: 71  WTDMLAGQGH--GGVEGNPVAAELQRAIGRYALPVAPLSRLIEAHIFDLYNDPMPDQTTF 128

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E Y     S  +      L          +  +AG+A    +L+   P    R QL+ P 
Sbjct: 129 EVYLDET-SAALLAHAAQLLGPASDDIAHLAHHAGLAVGGSRLLAAFPRDAARRQLFVPA 187

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
           D+L   G   E   +G+ +  +  A++  A     +L +A   +     ++ PA +P+++
Sbjct: 188 DLLQRSGATLEDAFAGKLTPELRAALEQLAAEARAHLDQALTLLSEAPREIRPALLPLAL 247

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +  L       + ++      ++L   W +  +S  + F
Sbjct: 248 AQRDLAQMARPEWDVMQPQPR-SRLATLWTLWRASRSRAF 286


>gi|59801366|ref|YP_208078.1| putative transferase [Neisseria gonorrhoeae FA 1090]
 gi|240014298|ref|ZP_04721211.1| putative transferase [Neisseria gonorrhoeae DGI18]
 gi|240016733|ref|ZP_04723273.1| putative transferase [Neisseria gonorrhoeae FA6140]
 gi|240080926|ref|ZP_04725469.1| putative transferase [Neisseria gonorrhoeae FA19]
 gi|240121861|ref|ZP_04734823.1| putative transferase [Neisseria gonorrhoeae PID24-1]
 gi|240123312|ref|ZP_04736268.1| putative transferase [Neisseria gonorrhoeae PID332]
 gi|240128014|ref|ZP_04740675.1| putative transferase [Neisseria gonorrhoeae SK-93-1035]
 gi|268594633|ref|ZP_06128800.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268597041|ref|ZP_06131208.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268681938|ref|ZP_06148800.1| transferase [Neisseria gonorrhoeae PID332]
 gi|268686406|ref|ZP_06153268.1| transferase [Neisseria gonorrhoeae SK-93-1035]
 gi|293399227|ref|ZP_06643392.1| squalene synthase HpnC [Neisseria gonorrhoeae F62]
 gi|59718261|gb|AAW89666.1| putative transferase [Neisseria gonorrhoeae FA 1090]
 gi|268548022|gb|EEZ43440.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268550829|gb|EEZ45848.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268622222|gb|EEZ54622.1| transferase [Neisseria gonorrhoeae PID332]
 gi|268626690|gb|EEZ59090.1| transferase [Neisseria gonorrhoeae SK-93-1035]
 gi|291610641|gb|EFF39751.1| squalene synthase HpnC [Neisseria gonorrhoeae F62]
          Length = 275

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLSGLEGLRRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D              Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGDLTDYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKRALWK 275


>gi|261380281|ref|ZP_05984854.1| squalene synthase HpnC [Neisseria subflava NJ9703]
 gi|284796793|gb|EFC52140.1| squalene synthase HpnC [Neisseria subflava NJ9703]
          Length = 271

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 87/270 (32%), Gaps = 6/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESSTK 89
              +  +  ++ P   R  +  +Y F      + D      + R  +L   K   +  T+
Sbjct: 5   HYENFPVGSIVLPRRLRKPVHAVYAFARTADDIADEGNAEAVERLRQLDELKAELDRITQ 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
               +S +     L +  +  + LP Q F D++ A   D   +   +  +   Y    ++
Sbjct: 65  --GGKSQTALMQRLYNEAIEPFQLPLQLFYDLLAAFSQDVVKNRYENFGELIAYCRLSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +    S+        A  +      +   + +G++Y P + L    + 
Sbjct: 123 PVGRIMLHLY-GQTDEVSIAQSDGICTALQLINFWQDVAADWQKGRVYIPQEDLQKFKVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKHA 267
            E   +G+        +    +   + L       + +   +      + +    +L+  
Sbjct: 182 EEQIAAGKADFAFQRLMAHECQRAFQILKAGSPLGKTLKGRIGFELRMIIVGGQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               + + +     ++      +  + +KK
Sbjct: 242 DGCKYDVFNQRPLLDKKDWMIIIKRALMKK 271


>gi|325130579|gb|EGC53326.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           OX99.30304]
 gi|325134662|gb|EGC57302.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M13399]
 gi|325201788|gb|ADY97242.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M01-240149]
 gi|325208460|gb|ADZ03912.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           NZ-05/33]
          Length = 275

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKRALWK 275


>gi|209519430|ref|ZP_03268227.1| squalene synthase HpnD [Burkholderia sp. H160]
 gi|209500169|gb|EEA00228.1| squalene synthase HpnD [Burkholderia sp. H160]
          Length = 282

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMYQVYAFCRAVDDIADSDLPRAERAAGLEQWRADIDACYAGQPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S       L   +  + L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  AS----LRALTRHIHTFHLQREDFHAMIDGMAMDAAADICAPDDATLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I         L    + G A  +  ++  +       + Y P ++L   G+   + 
Sbjct: 139 LSVRIFGMRDEPGRLL-AHHLGRALQLTNILRDIDEDAGIDRCYLPRELLAREGIAVANP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHAQNHG 271
               +   +       AE   ++  ++   M       V    I   +   +L+     G
Sbjct: 198 REIADDPSLPRVCATLAERAKQHFAESDAIMDREPRGHVRAPRIMSGVYRVLLERTLERG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F +     +  +L   W +   ++
Sbjct: 258 FDVPRTKVSKPKLRLLWIVARYAL 281


>gi|220926885|ref|YP_002502187.1| squalene synthase HpnD [Methylobacterium nodulans ORS 2060]
 gi|219951492|gb|ACL61884.1| squalene synthase HpnD [Methylobacterium nodulans ORS 2060]
          Length = 283

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 90/262 (34%), Gaps = 7/262 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  L P   R ++  +Y F   +  V D       R   L  W+   ++   G  A
Sbjct: 24  SFYAAMRLLPAAQRDAMYAVYAFCRAVDDVADDGGARDQRAAELDRWRADIDALYAGRPA 83

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYAFRISSRLIH 152
             ++P    L   VR + L  + FL +I+    D+  D +  D    + Y  R++S +  
Sbjct: 84  PRLAP----LAGPVRDFGLKREDFLAVIDGMAMDAEADIVAPDAATLDLYCDRVASAVGR 139

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +     RG+LY P + L A+GL   + 
Sbjct: 140 LSVRIFGLAEEPGRA-LAHHLGRALQLTNILRDIDEDAERGRLYLPRERLAAIGLSHPTP 198

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            +     R++      A     +   +   +            I  +    +L      G
Sbjct: 199 EAALRHPRLAEVCTALAAEAEAHYQASWRIIAAAPRRATKAPRIMAAAYHLILDGLLARG 258

Query: 272 FKIVSHSHTPNQLVRPWYMLSS 293
           +        P +L     +L  
Sbjct: 259 WAAPRTRVKPGKLALIGVLLRH 280


>gi|312199714|ref|YP_004019775.1| squalene synthase HpnC [Frankia sp. EuI1c]
 gi|311231050|gb|ADP83905.1| squalene synthase HpnC [Frankia sp. EuI1c]
          Length = 409

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 84/273 (30%), Gaps = 7/273 (2%)

Query: 26  RNLRDIDYDRYLAC-LLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
             LR    + +    ++ P   R     +Y F   +  + D A  P  R   L       
Sbjct: 29  EVLRAAYGENFPVSPVVLPAAIREHFKAIYGFARLVDDIGDEA--PGDRLALLDELAADL 86

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E       A    P    L + V   DLP + FL +IEA+  D              Y  
Sbjct: 87  ERI--WTGAGPSLPVHQRLATTVAACDLPAEPFLRLIEANRLDQRVTRYPTFDDLLRYCT 144

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +  +  +   +L        L +      A  I + +  +   Y  G++Y PL+ L  
Sbjct: 145 LSADPIGRMVLGVL-GRATPDRLILSDRVCTALQIAEHLQDVAEDYAAGRIYLPLEDLDT 203

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESV 263
            G+      +   S  +   +          L +       +   +  A    +    + 
Sbjct: 204 FGVAESDLAAPTASPALRNLMAFQVARATTVLDQGAPLASLLDGRMRLAIAGFIGGGRAA 263

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           L   +  G+ ++  +   ++       +  +++
Sbjct: 264 LHAVRQAGYDVLGGAPKASKPRLAGAAMWVAVR 296


>gi|327540993|gb|EGF27549.1| squalene synthase HpnD [Rhodopirellula baltica WH47]
          Length = 336

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 90/278 (32%), Gaps = 23/278 (8%)

Query: 35  RYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAE 94
            Y +  L P   R ++S LY F      + D       R   LQWW+     +  G  ++
Sbjct: 26  FYRSFWLLPRAKRDAMSALYAFARVTDDLGDCDEPLALRRSWLQWWRQTTAMNLIGEGSQ 85

Query: 95  S---------------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
                                  +     L     +Y +P++Y L++I+    D   +  
Sbjct: 86  PIRLADGVENIPPNSSVDLVRHATEIMPALRHAADRYQIPSRYLLEIIDGVMADQQKNRF 145

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
              +Q EHY + ++S +      I            +   G+A  +  ++  +     RG
Sbjct: 146 DTFEQLEHYCYLVASAVGIACLHIWGFRSPLPMQAAVD-CGLAFQLTNILRDVSEDAARG 204

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P       GL+ +  L+ +   R+   +        +           +  D  P 
Sbjct: 205 RIYLPRQHYEQHGLEEDDLLNPRKDARLRCLLLDETRRAAELFDSGWRVWDSLHDDGRPM 264

Query: 254 F-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           F +       +L+   +    +VS   +     R   +
Sbjct: 265 FSMMWRTYRKLLQRIIDDPDAVVSRRVSLGMRDRIGIV 302


>gi|187735955|ref|YP_001878067.1| Squalene/phytoene synthase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426007|gb|ACD05286.1| Squalene/phytoene synthase [Akkermansia muciniphila ATCC BAA-835]
          Length = 311

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 91/279 (32%), Gaps = 15/279 (5%)

Query: 25  LRNLRDIDYDRYLACLL--SPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWK 81
            + +        LA  L   P   R  ++  Y F   +  + D     P  R   L  W 
Sbjct: 4   AQTITSKAKSN-LAFALIDLPEEERRHMAEFYAFCRTVDDIVDEPGMTPRERHDALNRWV 62

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           ++        + E           +++  +L     L +IE    D          +   
Sbjct: 63  EVINGGEGLELTELEEDIIA----LIQDLELDTTPMLHLIEGCRSDICQQQPRSRDELLD 118

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLD 200
           Y + ++  +   +  I+ +    AS       G A  +  +I  +        ++Y P +
Sbjct: 119 YTYCVACCVGLTSARIMGAG--EASYPYAIALGHALQMVNIIRDVAEDCGKSNRIYLPKE 176

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI----P 256
            +   G   E       S R+   +K  A+L   +  +A  E   + P+   A I     
Sbjct: 177 DMDRFGYTLEDLRCRVYSPRLQELLKYEADLAETFFAEAEREYNLLSPEDKAALIPAQAM 236

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             I  ++L   +  GF+I    +  N   + W +  + +
Sbjct: 237 ALIYHTILDKMKASGFRIFDIRYRVNTFHKLWLLFRTKL 275


>gi|304387072|ref|ZP_07369324.1| squalene synthase HpnC [Neisseria meningitidis ATCC 13091]
 gi|304338871|gb|EFM04973.1| squalene synthase HpnC [Neisseria meningitidis ATCC 13091]
          Length = 275

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKKALWK 275


>gi|85709262|ref|ZP_01040327.1| phytoene synthase [Erythrobacter sp. NAP1]
 gi|85687972|gb|EAQ27976.1| phytoene synthase [Erythrobacter sp. NAP1]
          Length = 336

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 83/273 (30%), Gaps = 10/273 (3%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD------TARNPITRDMRLQWWK 81
           +R+  +  + A  L     R     LY +      + D         +    + RL+  +
Sbjct: 37  IREGSHSFHAAARLFDKTTRERAWLLYAWCRRCDDIADNQHMGGELGDQSNAEDRLKSIR 96

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +        +  P       +  +  L  Q   D+I     D+ +           
Sbjct: 97  --LLTRRALDGLPTADPAFDAFGLVAAEVGLTEQMAEDVIAGFQLDAADWRPRTEADMMR 154

Query: 142 YAFRISSRLIHLATMILDSERYS-ASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
           Y + ++  +  +  +++  +     +L      G+A  +  +   +      G+ Y P  
Sbjct: 155 YCYHVAGAVGVMMAVVMGVDPKDKDTLDRANDLGLAFQLSNIARDIVEDDAAGRCYLPEM 214

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSI 259
            L    ++        + + ++       +L  K+   AR     +      A +    I
Sbjct: 215 WLVEQDIEPGQHTKPHHREELAEMAARLVDLVEKHEAAARVGAARLPFRSRWAVLSAARI 274

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             ++ +  +  G +  +      +  + WY + 
Sbjct: 275 YGAIGRKVRKRGIEAWNSRTYVPRWEKAWYGVR 307


>gi|66802314|ref|XP_629939.1| UPF0551 family protein [Dictyostelium discoideum AX4]
 gi|74851279|sp|Q54E48|U551_DICDI RecName: Full=UPF0551 protein, mitochondrial; Flags: Precursor
 gi|60463356|gb|EAL61547.1| UPF0551 family protein [Dictyostelium discoideum AX4]
          Length = 356

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 114/284 (40%), Gaps = 4/284 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLS-PPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           + D  FV   ++  D + Y+  LL   P+ R     +  F+ E +    + ++     +R
Sbjct: 75  NADYNFVFERIKTCDKENYINSLLISDPIARRVAYAIRAFNIETVANDHSPKSEKISRLR 134

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L +WKD   +   G + +   P +  L  ++++  L   +F+ ++     D+    I D 
Sbjct: 135 LSFWKDAINNIYNGKVYD--QPLTRVLAQVIKEKKLTKTWFIKILNRREKDNQQVQIKDM 192

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           ++ E YA  I S L+ L    L  +          + G A  I  LI     H    + Y
Sbjct: 193 EELEQYADDIHSSLMLLTLEGLGVKGNHDVEHCASHLGKAIGIMVLIRGTVYHLASRKTY 252

Query: 197 FPLDILGAVGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            P+ +    G++ ES   G    +++  AI   A     +L KA++    I      AF+
Sbjct: 253 IPVSLTTKYGINVESLYRGDPQIEKLQNAIYEMASCAKLHLDKAKQFRGKIPHPATEAFL 312

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            VS+ E  L+  +   F I    +T    +    +  +   K+F
Sbjct: 313 SVSVVEDFLERLRKADFNIFEFPNTQQHPLLLIKLYKNKFFKQF 356


>gi|255067866|ref|ZP_05319721.1| squalene synthase HpnC [Neisseria sicca ATCC 29256]
 gi|255047854|gb|EET43318.1| squalene synthase HpnC [Neisseria sicca ATCC 29256]
          Length = 287

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 79/270 (29%), Gaps = 6/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESSTK 89
              +  +  L+ P   R     +Y F      + D        R   L   K   +   +
Sbjct: 21  HYENFPVGSLVMPRRLRKPTHAVYAFARTADDLADEGNAEADERLRALDELKSELDRIQR 80

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                 ++P    L    +  + LP Q F D++ A   D       D      Y  R +S
Sbjct: 81  --GETPLTPLMQRLQREAIVPFKLPLQPFYDLLSAFSQDVVKTRYQDFGDLIDYCRRSAS 138

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +    S+        A  +      + + + +G++Y P D L    + 
Sbjct: 139 PVGRIMLHLY-GQTDEVSIAQSDGICTALQLINFWQDVAVDWQKGRVYIPQDDLQKFNVS 197

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKHA 267
                 G+        +        + L       + +   +      + +    +L+  
Sbjct: 198 ETQIAEGKADFAFQRLMAYECNRAFQMLKGGSPLGKTLKGRLGFELRMIIVGGQLILQKL 257

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               + + +     ++      +  + +KK
Sbjct: 258 DGSKYDMFTQRPVLDKKDWLIILKRAFLKK 287


>gi|224827146|ref|ZP_03700242.1| squalene synthase HpnC [Lutiella nitroferrum 2002]
 gi|224600655|gb|EEG06842.1| squalene synthase HpnC [Lutiella nitroferrum 2002]
          Length = 270

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 84/268 (31%), Gaps = 5/268 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-ARNPITRDMRLQWWKDIFESST 88
           D   +  +  +L P   R ++  +Y F      V D   R P  R   L   +   +   
Sbjct: 4   DHYENFPVGSILLPRRMRRAVYAVYRFARYADDVADEGVRPPQERLDELAALRAELDVIG 63

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P    L   +R + LP Q F D++ A   D       +  +   Y  R ++
Sbjct: 64  A--GGTPQMPLMQALAEAIRAHALPLQPFYDLLSAFSQDVVKGRYENFAELVDYCRRSAN 121

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L  ++   E    SL +      A  +   +  + I + + ++Y P + L    + 
Sbjct: 122 PVGRLMLVL-YGETDPRSLAMADGICTALQLINFLQDVAIDWRKDRVYLPQEDLRRFRVA 180

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                +G +    +  +    E   K L       + +          + +  E +L+  
Sbjct: 181 EAQIAAGDSGGLWTPLMLKQIERARKMLQAGAPLGKKLKGRFGLELRLIVMGGERILQKL 240

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              G  +        +    + +  +  
Sbjct: 241 HASGGDVFRQRPVLTKRDWAYMLWRALR 268


>gi|325132662|gb|EGC55347.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M6190]
          Length = 275

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+  +     +        + L       R +   +      + +  + +L+  
Sbjct: 187 EGQIAEGRADEAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKRALWK 275


>gi|312112943|ref|YP_004010539.1| Phytoene synthase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218072|gb|ADP69440.1| Phytoene synthase [Rhodomicrobium vannielii ATCC 17100]
          Length = 324

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 79/272 (29%), Gaps = 13/272 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--------TARNPITRDMR 76
              +        +A  L P   R     LY +      V D           +  +   R
Sbjct: 9   HELIEKGSKSFAMAAKLLPRDARYDSMMLYAWCRHCDDVIDDQILGFNRETGSEKSPQER 68

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+  +    ++  G   E   P  V L  +  ++ +P ++ ++++     D         
Sbjct: 69  LEGLRRDTAAALAGTATE---PVFVALGRVAHKHHIPERHPMELLRGFEMDVNERVYETL 125

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +    Y + ++  +  +  MI+        L      GIA  +  +   +      G+LY
Sbjct: 126 EDTLDYCYHVAGVVGVMMAMIMGVRERPT-LNRASDLGIAFQLTNICRDVVEDAKAGRLY 184

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFI 255
            P   L   G+  +     Q   ++    K       +Y   A   M+ +          
Sbjct: 185 LPRQWLREAGVPEDKVADPQYRRQVYEVTKRLLCEADQYYRSAMFGMQRLPLGAAVGIGA 244

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
              +   + +   N G            + + 
Sbjct: 245 ARRVYRDIGRLVANRGESAWDGRAIVGPMRKL 276


>gi|187921654|ref|YP_001890686.1| squalene synthase HpnD [Burkholderia phytofirmans PsJN]
 gi|187720092|gb|ACD21315.1| squalene synthase HpnD [Burkholderia phytofirmans PsJN]
          Length = 282

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAAQRDAMYQVYAFCRAVDDIADSDLPRAERAAALERWRADIDACYAGAPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S       L   +  + L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  AS----LRALTRHIHTFHLQREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I   +     L    + G A  +  ++  +       + Y P ++L   G+   + 
Sbjct: 139 LSVRIFGMQEEPGRLL-AHHLGRALQLTNILRDIDEDAGINRCYLPHELLAREGIAVRNP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHAQNHG 271
               +   +       AE   ++   +   M       V    I   +   +L+     G
Sbjct: 198 TQIADDPSLPRVCATLAERAKEHFAASDAIMDREPRNHVRAPRIMSGVYRLLLERTLERG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F I     +  +L   W +   ++
Sbjct: 258 FDIPRTKVSKPKLRMLWIVARYAL 281


>gi|126445402|ref|YP_001064268.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 668]
 gi|237508347|ref|ZP_04521062.1| squalene synthase HpnD [Burkholderia pseudomallei MSHR346]
 gi|126224893|gb|ABN88398.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 668]
 gi|235000552|gb|EEP49976.1| squalene synthase HpnD [Burkholderia pseudomallei MSHR346]
          Length = 282

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 83/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 23  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 198 QTIARDPLLPRVCATLVERALQHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAPPRAPLRKPRARMLLLAARYAL 281


>gi|34498434|ref|NP_902649.1| phytoene synthase-like protein [Chromobacterium violaceum ATCC
           12472]
 gi|34104288|gb|AAQ60647.1| probable phytoene synthase-related protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 270

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 81/269 (30%), Gaps = 5/269 (1%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESSTK 89
              +  +  LL P   R ++  +Y F      V D     P  R   L   +   +    
Sbjct: 5   HYENFPVGSLLLPRRMRRAVHAIYRFARYADDVADEGDAAPAERLAELDRIEADLDRIAA 64

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
           G            L + V ++ LP Q   D++ A   D          +   Y  R ++ 
Sbjct: 65  GEPTRIA--LMAPLAAAVAEHALPLQPMRDLLSAFRQDVVKTRYQSFGELVDYCRRSANP 122

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           +  L   +   E    SL        A  +      + + + +G++Y P + L   G+D 
Sbjct: 123 VGRLMLALY-GETDPRSLAQADGICTALQLINFWQDVALDWRKGRVYLPQEDLARFGVDE 181

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHAQ 268
               +G+   +    +    E   K L       + +   +      + +  E +L    
Sbjct: 182 AQIAAGRFDAKWRALMLFQVERARKMLQAGAPLGKTLRGRLGLELRLIVMGGERILSKLH 241

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                + +           + M  +   K
Sbjct: 242 AADGDVFTRRPVLGGRDWIYMMWRACRAK 270


>gi|261392232|emb|CAX49752.1| putative phytoene synthase [Neisseria meningitidis 8013]
          Length = 275

 Score =  148 bits (374), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKKALWK 275


>gi|294789033|ref|ZP_06754273.1| squalene synthase HpnC [Simonsiella muelleri ATCC 29453]
 gi|294483135|gb|EFG30822.1| squalene synthase HpnC [Simonsiella muelleri ATCC 29453]
          Length = 269

 Score =  148 bits (374), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 85/268 (31%), Gaps = 7/268 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTK 89
              +  +  +  P   R +   +Y F      + D    NP  R   L   K   +   K
Sbjct: 5   HYENFPVGSIAMPRRLRQATHAIYAFARTADDIADEGDANPEQRLHDLNVLKQELDRIAK 64

Query: 90  GLIAESISPFSVEL-LSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
             I    +P    L    +  + LP Q F D+++A   D       +  +   YA R ++
Sbjct: 65  NQI--PETPLMQRLLNEAITPHQLPLQPFYDLLDAFSQDVVKTRYANFGELVDYARRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +       +  +       A  +      + I + + ++Y P D L   G+ 
Sbjct: 123 PVGRLMLHLYGVTDERSFAQ-SDGICTALQLINFWQDVAIDWQKNRVYIPQDDLQKFGVT 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSIT-ESVLKHA 267
            +    G+        +    E   K L+      R +   +      + +  +S+L+  
Sbjct: 182 EQQIADGKVDFAFQRLMAYECERAFKMLYAGSPLGRTLKGRLGLELRMIVLGGQSILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
               + + +             ++  ++
Sbjct: 242 DGCQYDVFNQRPKLG-WKDWLRIVKKAV 268


>gi|53715880|ref|YP_106609.1| putative phytoene synthase [Burkholderia mallei ATCC 23344]
 gi|53723357|ref|YP_112342.1| squalene/phytoene synthase [Burkholderia pseudomallei K96243]
 gi|121597019|ref|YP_990730.1| putative phytoene synthase [Burkholderia mallei SAVP1]
 gi|124382828|ref|YP_001025213.1| putative phytoene synthase [Burkholderia mallei NCTC 10229]
 gi|126455498|ref|YP_001077192.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134281787|ref|ZP_01768494.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 305]
 gi|242312644|ref|ZP_04811661.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254177318|ref|ZP_04883974.1| putative phytoene synthase [Burkholderia mallei ATCC 10399]
 gi|254203629|ref|ZP_04909990.1| putative phytoene synthase [Burkholderia mallei FMH]
 gi|254264168|ref|ZP_04955033.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1710a]
 gi|52213771|emb|CAH39826.1| squalene/phytoene synthase [Burkholderia pseudomallei K96243]
 gi|52421850|gb|AAU45420.1| putative phytoene synthase [Burkholderia mallei ATCC 23344]
 gi|121224817|gb|ABM48348.1| putative phytoene synthase [Burkholderia mallei SAVP1]
 gi|126229266|gb|ABN92679.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134246849|gb|EBA46936.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 305]
 gi|147745868|gb|EDK52947.1| putative phytoene synthase [Burkholderia mallei FMH]
 gi|160698358|gb|EDP88328.1| putative phytoene synthase [Burkholderia mallei ATCC 10399]
 gi|242135883|gb|EES22286.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254215170|gb|EET04555.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1710a]
 gi|261826997|gb|ABM99442.2| putative phytoene synthase [Burkholderia mallei NCTC 10229]
          Length = 282

 Score =  148 bits (374), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 82/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 23  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L+ A   G
Sbjct: 198 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAPPRAPLRKPRARMLLLAARYAL 281


>gi|320107066|ref|YP_004182656.1| Phytoene synthase [Terriglobus saanensis SP1PR4]
 gi|319925587|gb|ADV82662.1| Phytoene synthase [Terriglobus saanensis SP1PR4]
          Length = 318

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 31/304 (10%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRD 74
             +          +    + Y A +  P     ++  +Y F      + D    +   R 
Sbjct: 4   QLALAYQECRAIAKREAKNFYYAFVALPRHKSDAMCAIYAFMRRADDLSDDESISIPERR 63

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS-- 132
           + +Q W D + ++  G          + +    +++ +P++    ++     D   +   
Sbjct: 64  VAMQQWLDAWRAARAGSTTT--DSIFLAVNDTQKRFAIPDELLEQLVRGTTMDLEENIDG 121

Query: 133 --------------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY 172
                                        Y + ++S +  +   I       A     + 
Sbjct: 122 VVPIMAIPAGMISHQRAYQAYESFDDLYRYCYLVASVVGLVCIRIFGYTDPRAER-FAEE 180

Query: 173 AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR----ISLAIKIF 228
            GIA  +  ++  +     RG+LY PL+ + + G D    LS  ++ R    +   +++ 
Sbjct: 181 TGIAFQLTNILRDVREDAERGRLYLPLEDMQSAGADVTQILSATHTHRPSQPVLALMQLE 240

Query: 229 AELGLKYLFKAREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            E    Y   A + +  +  D   A  +  SI   +L+       K+     +    V+ 
Sbjct: 241 IERARAYYQAADQLIPLLDRDSRAAMKVLASIYHGLLERVARDPAKVFVERVSVPTSVKL 300

Query: 288 WYML 291
             +L
Sbjct: 301 TILL 304


>gi|298717270|ref|YP_003729912.1| prephytoene pyrophosphate synthase [Pantoea vagans C9-1]
 gi|298361459|gb|ADI78240.1| prephytoene pyrophosphate synthase [Pantoea vagans C9-1]
          Length = 309

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 80/283 (28%), Gaps = 12/283 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
               +  +         A  L     R S+  LY +      V D           +  +
Sbjct: 7   LDHAVETMEVGSKSFATASKLFDAKTRRSVLMLYSWCRHCDDVIDDQVLGFSNDTPSLQS 66

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            + RL   +     +  G       P       +   +D+   Y  D +     D +   
Sbjct: 67  AEQRLAQLEMKTRQAYAGSQMHE--PAFAAFQEVAMAHDILPAYAFDHLAGFAMDVHETR 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                    Y + ++  +  +   I+     +   R     G+A  +  +   +      
Sbjct: 125 YQTLDDTLRYCYHVAGVVGLMMAQIMGVRDNATLDRACD-LGLAFQLTNIARDIVEDAET 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P + L   GL RE+    +N   +S   +   E    Y   A   +  +      
Sbjct: 184 GRCYLPAEWLAEEGLTRETLADPRNRKALSRVARRLVETAEPYYRSASAGLPGLPLRSAW 243

Query: 253 AFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           A      +   +       G +      + +   +   ++++S
Sbjct: 244 AIATAKQVYRKIGMKVVEAGAQAWDQRQSTSTPEKLVMLVAAS 286


>gi|304395260|ref|ZP_07377144.1| Phytoene synthase [Pantoea sp. aB]
 gi|304357513|gb|EFM21876.1| Phytoene synthase [Pantoea sp. aB]
          Length = 309

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 78/283 (27%), Gaps = 12/283 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
               +  +         A  L     R S+  LY +      V D           +  +
Sbjct: 7   LDHAVETMEVGSKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNNTPSLQS 66

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            + RL   +     +  G       P       +   +D+   Y  D +     D     
Sbjct: 67  AEQRLAQLEMKTRQAYAGSQMHE--PAFAAFQEVAMAHDILPAYAFDHLAGFAMDVRETR 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                    Y + ++  +  +   I+     +   R     G+A  +  +   +      
Sbjct: 125 YQTLDDTLRYCYHVAGVVGLMMAQIMGVRDNATLDRACD-LGLAFQLTNIARDIVEDAEA 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P + L   GL RE+     N   +S   +   E    Y   +   +  +      
Sbjct: 184 GRCYLPAEWLTEAGLTRETLADPHNRQALSRVARRLVETAEPYYQSSLAGLPGLPLRSAW 243

Query: 253 AFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           A      +   +       G +      + +   +   ++++S
Sbjct: 244 AIATAKQVYRKIGMKVVQAGSQAWDQRQSTSTPEKLAMLVAAS 286


>gi|312115726|ref|YP_004013322.1| squalene synthase HpnD [Rhodomicrobium vannielii ATCC 17100]
 gi|311220855|gb|ADP72223.1| squalene synthase HpnD [Rhodomicrobium vannielii ATCC 17100]
          Length = 285

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 94/270 (34%), Gaps = 8/270 (2%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESS 87
           R +    Y A  + PP  R ++  +Y F   +  + D         +R L  W+   ++ 
Sbjct: 20  RALGSSFYAAMRIMPPGQREAMFEIYSFCRAVDDIADDIEGDAEGRLRKLDLWRRDIDAV 79

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN-DSIFDCKQFEHYAFRI 146
            +G     ++  +V     VR + L  + F  +I+    D +           + Y  R+
Sbjct: 80  YRGEPVRGLTGLAVA----VRDFGLEREDFRAVIDGMETDVHGPVQAPTFNDLDLYCDRV 135

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +S +  L+  +       A   + ++ G A  +  ++  L       +LY P + L   G
Sbjct: 136 ASAVGRLSVKVFRMPD-HAGRELSEHLGRALQLTNILRDLDDDAAINRLYLPREFLADEG 194

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLK 265
           ++  +  +      +        +L   +  +A   M+     +     +     +++L 
Sbjct: 195 IESTAPDTVLAHPALGEVCNRIVKLARWHFAEADRIMKAHPRRMVRTPRVMSEAYKAILS 254

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                GFK        ++    + +L   I
Sbjct: 255 GLIKRGFKPPRTRVKLSKPRIVYIVLRHCI 284


>gi|325205732|gb|ADZ01185.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M04-240196]
          Length = 275

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EGQIAEGRADAAFQRLMAYECRCAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKRALWK 275


>gi|149918170|ref|ZP_01906662.1| putative terpenoid synthase [Plesiocystis pacifica SIR-1]
 gi|149820930|gb|EDM80337.1| putative terpenoid synthase [Plesiocystis pacifica SIR-1]
          Length = 319

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 100/287 (34%), Gaps = 8/287 (2%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--- 66
            ++ E++ S     V +  +    +   A L      R  L ++Y F   +  + D    
Sbjct: 10  AQRFEQLRSASVKLVRKRSKRSSSNFKFAFLFLAANQRKGLEYVYKFCRVVDDIVDERPP 69

Query: 67  -ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                   +  L  W                S   V L   V  ++LP   F +++    
Sbjct: 70  GEAGRAQAERELDEWMAELARIYDPE-QRPTSKLGVGLQQTVATFNLPRFAFEEIVAGCA 128

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
            D    +  D +  E Y +R++S +  L   +   +  +A     ++ G+A     ++  
Sbjct: 129 MDLDTSTYADLESLELYCYRVASCVGILCIGLFGDQSPAAQRY-ARHLGLALQYTNILRD 187

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           +     R ++Y P D+L    L+    L  +   R     + FA++      +A  E+ +
Sbjct: 188 IGEDASRARVYVPRDLLARHRLNERDMLECRYDARFLTMAEEFADIAEAEYQRAWAELPH 247

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           +     + PA +       +L   + H + + +H     ++ +    
Sbjct: 248 VENRRALLPAEVMGRTYYELLGEVRAHNYNVFTHRAALRRVDKLKVA 294


>gi|325142698|gb|EGC65078.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           961-5945]
          Length = 275

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPIHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKRALWK 275


>gi|240115462|ref|ZP_04729524.1| putative transferase [Neisseria gonorrhoeae PID18]
          Length = 270

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLVLPRRLRKPVHAVYAFARTADDMADEGSMPSEARLSGLEGLRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D              Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGDLTDYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKRALWK 270


>gi|91978040|ref|YP_570699.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisB5]
 gi|91684496|gb|ABE40798.1| Squalene/phytoene synthase [Rhodopseudomonas palustris BisB5]
          Length = 279

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 89/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D+      R   LQ W+D  E+  +G   
Sbjct: 20  SFYAAMRILPRPQREAMFQVYSFCRYVDDIADSDEPRDLRRAGLQRWRDDVEALYRGAPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   +    VR + L  + FL +I+    D   D    +    + Y  R++S +  
Sbjct: 80  ----PRLADYQGSVRAFGLKREDFLAIIDGMEMDVTADIRAPNDATLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I         L +  + G A  +  ++  +      G+LY P + L A G+     
Sbjct: 136 LSVRIFGLPEQDGIL-LAHHLGRALQLTNILRDIDEDAELGRLYLPREGLVAAGITSIDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
           +       +           LK+   A   M       V    I      S+L+     G
Sbjct: 195 MLVARDPALPNVCAPLVARALKHFDAADVVMSRNPRRLVKAPRIMGKYYFSILQLLIARG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +  +   +L  ++
Sbjct: 255 FAPPRAPVKLGKASKIAILLQYAV 278


>gi|218768503|ref|YP_002343015.1| putative transferase [Neisseria meningitidis Z2491]
 gi|121052511|emb|CAM08850.1| putative transferase [Neisseria meningitidis Z2491]
          Length = 276

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 79/269 (29%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L   +   +    
Sbjct: 11  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLDALRRELDVLAS 70

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 71  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 128

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 129 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 187

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 188 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 247

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 248 DACRYDVFAQRPVLDKKDWLIMLKRALWK 276


>gi|325267993|ref|ZP_08134640.1| phytoene/squalene synthetase [Kingella denitrificans ATCC 33394]
 gi|324980534|gb|EGC16199.1| phytoene/squalene synthetase [Kingella denitrificans ATCC 33394]
          Length = 272

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 84/271 (30%), Gaps = 7/271 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESSTK 89
              +  +  ++ P   R  +  +Y F      + D     P  R   L +     +    
Sbjct: 6   HYENFPVGSIVLPRRLRRPIHAVYAFARYADDLADEGDATPEERKSSLHFLARELDKIGA 65

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                  +     L +  V  + LP Q F D++ A   D++        +   Y+ R ++
Sbjct: 66  EQT--PETALMQRLQAEAVAPFSLPLQPFYDLLSAFEQDTHKTRYQHFGELVDYSRRSAN 123

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +       +          A  +      + + + + ++Y P D +   G+ 
Sbjct: 124 PIGRIILYLYGQTDPQSV-GQSDGICTALQLINFWQDVAVDWQKNRVYLPQDDMAKFGVT 182

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
            +   +G  +  +   +        K L+      + +   +      + +    +L+  
Sbjct: 183 EDDLAAGCMTPALRKLLAYECGRARKMLYAGAPLGKRLKGRLGFELRLIILGGDRILQKL 242

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             + + +             W ML  + +K+
Sbjct: 243 AENQYDVFQKRPVL-VWKDYWLMLKRAWQKK 272


>gi|325140651|gb|EGC63168.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           CU385]
 gi|325199876|gb|ADY95331.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           H44/76]
          Length = 270

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 83/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELNGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKKALWK 270


>gi|167579232|ref|ZP_02372106.1| phytoene synthase, putative [Burkholderia thailandensis TXDOH]
 gi|167617355|ref|ZP_02385986.1| phytoene synthase, putative [Burkholderia thailandensis Bt4]
 gi|257141210|ref|ZP_05589472.1| phytoene synthase, putative [Burkholderia thailandensis E264]
          Length = 275

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 16  SFYLAMRILPAEQRDAMFHVYAFCRAVDDIADEGGPRAERAAQLDRWRADIDDCYAGKPR 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 76  ASLVPLARE----IGKFGLHREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 132 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAMINRCYLPRELLAREGIAITDP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHAQNHG 271
            +     ++        E   ++  +A   M       V    I       +L+ A   G
Sbjct: 191 QTIARDPKLPRVCATLVERAQQHFAQADAVMDGARRTQVRAPRIMSGAYRLILEAAVARG 250

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 251 FAPPRAPLRKPRARMLLLAARYAL 274


>gi|260459801|ref|ZP_05808055.1| Squalene/phytoene synthase [Mesorhizobium opportunistum WSM2075]
 gi|259034603|gb|EEW35860.1| Squalene/phytoene synthase [Mesorhizobium opportunistum WSM2075]
          Length = 274

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 3/257 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             +R  D+DRYL  L +P   R +L  LY F+ E+  +RD    P+  ++RLQWW+D+  
Sbjct: 2   DTVRAADHDRYLTALYAPADTRDALFSLYAFNAEIAGIRDRIHEPLPGEVRLQWWRDVVA 61

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
           +  +        P +  L + +  + LP   F +M+EA  FD Y+D +      E Y   
Sbjct: 62  AGGEAGAG---HPVAEALNATIAAFKLPKLAFENMLEARIFDLYDDPMPSRTDLEGYCGE 118

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            ++ LI LA M+LD         +   AG AQ +  L+  LP+H  RGQ + P DIL A 
Sbjct: 119 TAAALIQLAAMVLDPVEAPRFAELAGRAGCAQAMTGLLLLLPLHRKRGQCFVPADILAAA 178

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
           G   E F++G        A+     L  ++L    ++   +   + P F+P++++ + L 
Sbjct: 179 GSSAEEFVAGDGGPGAQRAVAAMMALAREHLSAFEQDAAALPASLRPVFLPLALSRAYLG 238

Query: 266 HAQNHGFKIVSHSHTPN 282
             +      +      +
Sbjct: 239 KMERSRQSPLDGVVRLS 255


>gi|325204499|gb|ADY99952.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M01-240355]
          Length = 275

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKKALWK 275


>gi|307726535|ref|YP_003909748.1| squalene synthase HpnD [Burkholderia sp. CCGE1003]
 gi|307587060|gb|ADN60457.1| squalene synthase HpnD [Burkholderia sp. CCGE1003]
          Length = 282

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 87/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAAQRDAMYQVYAFCRAVDDIADSDLPRADRAAALERWRADIDACYAGAPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S       L   +  + L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  AS----LRALTRHIHTFHLQREDFHAMIDGMAMDAAADICAPDEATLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I   +     L    + G A  +  ++  +       + Y P ++L   G+   + 
Sbjct: 139 LSVRIFGMQEEPGRLL-AHHLGRALQLTNILRDIDEDAGINRCYLPRELLAREGIAITNP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
               +   +       A    ++   +   M       V    I   +   +L+     G
Sbjct: 198 AQIADDPSLPRVCATLAARAQEHFAASDAIMDREPRSQVRAPRIMSGVYRVLLERTLERG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F I     +  +L   W +   ++
Sbjct: 258 FDIPRTKVSKPKLRLLWIVARYAL 281


>gi|326404032|ref|YP_004284114.1| phytoene synthase [Acidiphilium multivorum AIU301]
 gi|325050894|dbj|BAJ81232.1| phytoene synthase [Acidiphilium multivorum AIU301]
          Length = 352

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 87/271 (32%), Gaps = 8/271 (2%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D       LR      + A  L P   R + + LY F  E     D A +       +
Sbjct: 5   DPDIAACAARLRRGSVSFHAASRLLPAEVRAAATALYAFCREADDAVDLAADKQAGVAAI 64

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
               +               P      + + ++ +P+     +IE   +D+         
Sbjct: 65  SARLEAI-----CRGVRLDDPVDRAFAATIARHGIPHALPEALIEGLAWDAAGRRYATLA 119

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +   YA R++  +  +  M++ +    ASL      G+A  +  +   +       +LY 
Sbjct: 120 ELRAYAARVAGSVGVMMAMLMGARD-EASLAAACDLGLAMQLTNIARDVGEDAAERRLYL 178

Query: 198 PLDILGAVGLDRESFLSGQN-SDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           PLD L   GL+ E FL+    +  ++  I    E   +    A   +  +     P    
Sbjct: 179 PLDWLDEAGLEPERFLARPAFTPALAQVIGRLLEEAERRYAAAGRGIAALPLACRPGIAA 238

Query: 257 V-SITESVLKHAQNHGFKIVSHSHTPNQLVR 286
              I   + +    +G   VS     +   +
Sbjct: 239 ARRIYREIGRLLAANGLDSVSTRTRVSSRRK 269


>gi|269213530|ref|ZP_05982173.2| squalene synthase HpnC [Neisseria cinerea ATCC 14685]
 gi|269146350|gb|EEZ72768.1| squalene synthase HpnC [Neisseria cinerea ATCC 14685]
          Length = 270

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 82/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P   R   L   +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGDFPIEERLENLDVLRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
               +S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 65  --GGQSAHPLIARLDAEAVAPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELVDYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +       +  +       A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALYGKTDAVSVAQ-SDGICTALQLVNFWQDVAVDWRKGRVYIPQDDLLKFGVA 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       + +   +      + +  + +L+  
Sbjct: 182 EEQIAAGRADAAFQRLMAFQCRRAFRMLRAGSPLAKELKGRIGLELRMIVLGAQMILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  +
Sbjct: 242 DACRYDVFAQRPLLDKKDWLIMLKRAVWR 270


>gi|167527315|ref|XP_001747990.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773739|gb|EDQ87377.1| predicted protein [Monosiga brevicollis MX1]
          Length = 338

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/284 (20%), Positives = 104/284 (36%), Gaps = 5/284 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
            + +    +R  D D YLA LL P   + ++  L   + E+  +RD+AR P T  MR  +
Sbjct: 56  AAAYCRELVRRYDRDHYLATLLLPSTAQRAVFALRALNIEVATIRDSAREPATTSMRFLF 115

Query: 80  WKDIFESSTKGLIAESISPFS-VELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WKD  ++          +P           Q     + FL  +        +       Q
Sbjct: 116 WKDAIDALFDQGRPLPQTPVMQELETLQQEQQLQLTRTFLRRLIMAREKDSDVPFASIPQ 175

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
            E YA   +S L++L    +    ++A   +  + G AQ    L+  LP    R     P
Sbjct: 176 LERYAEDTASTLLYLTLEAMHIRNHTA-EHIASHIGKAQGHVTLLRGLPFLAKRNLCRLP 234

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR---EEMRYILPDVFPAFI 255
           +++    GL   + L G+ +  +   +   A   +++L  AR   +     L     A++
Sbjct: 235 VELCAHHGLRAPTVLRGEVTTELQDVVHAVASNAVRHLNTARLEYQADETQLKTAASAYL 294

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           P    +  L       F     +      + P+ M  +  +  F
Sbjct: 295 PAVALQQYLDQLLKADFNPFHPNLAQTSGLLPFRMGWAKFRHSF 338


>gi|288922392|ref|ZP_06416582.1| squalene synthase HpnC [Frankia sp. EUN1f]
 gi|288346263|gb|EFC80602.1| squalene synthase HpnC [Frankia sp. EUN1f]
          Length = 374

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 78/260 (30%), Gaps = 6/260 (2%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            L     +  +A  L P   R  L+ LY F   +  + D A  P  R   L    +  E 
Sbjct: 30  LLAASAENFPVASRLLPARLREHLNALYVFGRLVDDIGDEA--PGDRLALLDELGEDLEL 87

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                  +   P    L   VR  DLP + F  +++A+  D              Y    
Sbjct: 88  I--WSGGQPRLPVHQTLARTVRACDLPAEPFRRLVQANRQDQVVTRYDTYDDLVRYCTLS 145

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +  +  +   +       A + +      A  + +    +      G++Y PL+ + A G
Sbjct: 146 ADPIGRMVLGVFGLAT-PARVALSDRICTALQLAEHFQDVAEDLAAGRIYVPLEDMEAFG 204

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESVLK 265
           +      +   S  +   +          L      +  +   +  A    V    + L 
Sbjct: 205 VTEADLAAPSASPAVRHLMAFEVARARTLLDSGAPLVGLVGGRLRLAMAGFVGGGRAALD 264

Query: 266 HAQNHGFKIVSHSHTPNQLV 285
             +   + ++  +    +  
Sbjct: 265 AIRRADYDMLGGAPKAPKPR 284


>gi|239998785|ref|ZP_04718709.1| putative transferase [Neisseria gonorrhoeae 35/02]
          Length = 270

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLSGLEGLRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D              Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGDLTDYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKRALWK 270


>gi|238025576|ref|YP_002909808.1| Squalene/phytoene synthase family protein [Burkholderia glumae
           BGR1]
 gi|237880241|gb|ACR32573.1| Squalene/phytoene synthase family protein [Burkholderia glumae
           BGR1]
          Length = 282

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 86/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D       R   L  W+   ++   G   
Sbjct: 23  SFYHAMRILPAPQREAMFQVYAFCRAVDDIADDGGTREERAAGLDRWRADIDACFAGQPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    +R++ L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  ASLVPLTRE----IRRFGLKREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I   +       +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMQEAPGIE-LAHHLGRALQLTNILRDIDEDADIHRCYLPRELLEREGIALGDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +       AE  L +  +A   M       V    I       +L+ A   G
Sbjct: 198 RAIARHPALPRVCATLAERALAHFAQADRVMDGAPRAQVRAPRIMSGAYRCILEAALARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +L      L  + 
Sbjct: 258 FAAPRQPLRKPRLRMLLIALRYAF 281


>gi|254262244|emb|CAZ90571.1| Phytoene synthase crtB [Enterobacter helveticus]
          Length = 308

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 89/283 (31%), Gaps = 12/283 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
                + +         A  L     R S+  LY +      V D          R    
Sbjct: 6   LNHATQTMAAGSKSFNTAAKLFDAETRRSVLMLYTWCRHCDDVIDDQTLGFAAGTRAETG 65

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            + RL   + +   + +G       P       +   + +P +  LD IE    D   + 
Sbjct: 66  TEQRLAELQALTRRAYRGEPM--SDPAFAAFQEVALAHAIPERQALDHIEGFAMDVRGEH 123

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               +    Y + ++  +  +   ++ +   +A  +     G+A  +  +   +    H 
Sbjct: 124 YETIEDTLRYCYHVAGVVGLMMARVMGARDEAALNQACD-LGLAFQLTNIARDIVEDAHN 182

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P   L   GL  E+F +  N +R++   +        Y   A+  +  +      
Sbjct: 183 GRCYLPARWLHEAGLSPENFAAPHNRERLAGVARRLVNEAEPYYRSAKSGLGALPLRSAW 242

Query: 253 AFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           A      +   +  +    G +      + ++  +   + SS+
Sbjct: 243 AIATARSVYREIGFNVVKAGPQAWDRRQSTSKAQKLTLLASSA 285


>gi|167840989|ref|ZP_02467673.1| phytoene synthase, putative [Burkholderia thailandensis MSMB43]
          Length = 282

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 85/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 23  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGPRAERAAQLDRWRADIDDCYAGKPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  ASLVPLARE----IGKFGLRREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPDEPG-RELSHHLGRALQLTNILRDIDDDATINRCYLPRELLAREGIAIADP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +     ++        E   ++  +A   M       V    I       +L+ A   G
Sbjct: 198 QTIARDPKLPRVCATLVERAQQHFAQADAVMDASRRAQVRAPRIMSGAYRLILEAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +      +   ++
Sbjct: 258 FAPPRAPLRKPRARMLLLVARYAL 281


>gi|297250272|ref|ZP_06863978.2| squalene synthase HpnC [Neisseria polysaccharea ATCC 43768]
 gi|296839284|gb|EFH23222.1| squalene synthase HpnC [Neisseria polysaccharea ATCC 43768]
          Length = 275

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 80/269 (29%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKRALWK 275


>gi|308389666|gb|ADO31986.1| phytoene synthase-related protein [Neisseria meningitidis alpha710]
 gi|325136585|gb|EGC59186.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M0579]
          Length = 270

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKRALWK 270


>gi|170733294|ref|YP_001765241.1| squalene synthase HpnD [Burkholderia cenocepacia MC0-3]
 gi|169816536|gb|ACA91119.1| squalene synthase HpnD [Burkholderia cenocepacia MC0-3]
          Length = 300

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 80/277 (28%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    EL        +P     +L WW 
Sbjct: 28  DYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 87

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 88  KELAALAD---GQPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQR 144

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      S   +         G A  + Q + +L      G++Y P+D 
Sbjct: 145 YIAQVGGTFASLVARAS-SANPADPQPWAADVGRALMLAQFVQELGNDARHGRIYLPIDE 203

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++         L  A   +              +++ 
Sbjct: 204 LQRYNVTAADLLNRRYSPAFTELLQFQTTRARDALAVADAAIPATERRAQRTLRAQIALA 263

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L      G++++        + + W    ++ ++
Sbjct: 264 GALLDEIARDGYQVLHQRIALTPIRKLWIAWRAARRR 300


>gi|225076484|ref|ZP_03719683.1| hypothetical protein NEIFLAOT_01530 [Neisseria flavescens
           NRL30031/H210]
 gi|224952163|gb|EEG33372.1| hypothetical protein NEIFLAOT_01530 [Neisseria flavescens
           NRL30031/H210]
          Length = 271

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 28/270 (10%), Positives = 83/270 (30%), Gaps = 6/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESSTK 89
              +  +  ++ P   R  +  +Y F      + D        R  +L   K   +   +
Sbjct: 5   HYENFPVGSIVLPRRLRKPVHAVYAFARTADDIADEGNAEAAERLRQLDELKAELDRIAQ 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
               +  +     L +  +  + LP Q F D++ A   D       +  +   Y    ++
Sbjct: 65  --GGKPQTALMQRLHNEAIEPFQLPLQPFYDLLAAFSQDVVKTRYENFGELIAYCRLSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +       +  +       A  +      + + + +G++Y P + L    + 
Sbjct: 123 PVGRIMLHLYGQTDEVSMAQ-SDGICTALQLINFWQDVAVDWQKGRVYIPQEDLQKFKVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKHA 267
            E   +G+        +    +   + L       + +   +      + +    +L+  
Sbjct: 182 EEQIAAGKADFAFQRLMAHECQRAFQMLKAGSPLGKTLKGRIGFELRMIIVGGQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               + + +     ++      +  + +KK
Sbjct: 242 DGCKYDVFNRWPLLDKKDWMIIIKRALMKK 271


>gi|310791126|gb|EFQ26655.1| squalene/phytoene synthase [Glomerella graminicola M1.001]
          Length = 587

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 104/319 (32%), Gaps = 29/319 (9%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           +    +    ++I           L       +LA  + P   RI L+ LY +      +
Sbjct: 269 RVFPSSKYDMQRILG--IRQAAARLAKKSRSFHLASSVFPGRLRIDLTLLYSYCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESIS-----------PFSVELLSIVRQYDL 112
            D A  P    + +           K   A S             P ++  L ++    L
Sbjct: 327 VDDAATPEEAAVWISKLDRHLSLLYKDPDATSTPLASKYAAENFPPSALSALDMLPTSLL 386

Query: 113 PNQYFLDMIEAHFFDSYNDS----IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
           P +   ++++    D    +    I D +  E YA R++S +      ++          
Sbjct: 387 PREPLAELLKGFEMDLSFSNSAFPIADPEDLELYAARVASTVGQACLELVFCHCQHGLPD 446

Query: 169 VI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR 220
            +        +  G+A     +   + +    G++Y P   L   GL  E  L   NS+ 
Sbjct: 447 YMKAYLRNTARQMGLALQFVNISRDIAVDAKIGRVYLPTTWLKEEGLTPEDVLKSPNSEG 506

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIV---S 276
           +    +      L +  +AR+ M++I  +   P  + V     + +    +G       S
Sbjct: 507 VGKVRRRILAKALDHYGEARDSMKWIPSEARGPMIVAVESYMEIGRVLMRNGGSAAADGS 566

Query: 277 HSHTPNQLVRPWYMLSSSI 295
              T  +  R W   S+ +
Sbjct: 567 GRATVPKSRRIWVAWSTLM 585


>gi|91216532|ref|ZP_01253498.1| phytoene synthetase [Psychroflexus torquis ATCC 700755]
 gi|91185326|gb|EAS71703.1| phytoene synthetase [Psychroflexus torquis ATCC 700755]
          Length = 285

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 84/293 (28%), Gaps = 25/293 (8%)

Query: 14  EKIFSRDSLFVLRNLRD-IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S    + +         +A  L  P  R  +  +Y F      + DT  +   
Sbjct: 8   KSLFDTVSRECSKMVTHSYSTSFSIATKLLAPSIRQDIYNIYGFVRFADEIVDTFHDYDK 67

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +  ++  D++++    +   S++P        V +Y++    +   +++   D +  +
Sbjct: 68  GILFKKFQVDMYDAVEHKI---SLNPILNSFQETVHKYNIDAHLYESFMDSMEKDLHKSN 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY---AGIAQFIGQLICQLPIH 189
               ++++ Y +  +  +  +   +           + +     G A      +  L   
Sbjct: 125 YLTQEEYKAYIYGSADVVGLMCLKVFVKGDLKMYENLKEDAMRLGSAFQKVNFLRDLKAD 184

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
                + YFP   L                +                       +  +  
Sbjct: 185 CEDLERSYFPEADLNR------------LDENTKA---SIISEIDADFEAGLRGISMLPV 229

Query: 249 DVF-PAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +     +        +L+  +N    +I +         +   +  S I  RF
Sbjct: 230 EAKLGVYTAYIYYSKLLQKLKNTPSLEIKNRRIRVPNYQKASLLAKSYISCRF 282


>gi|301106939|ref|XP_002902552.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262098426|gb|EEY56478.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 318

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 13/287 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
             ++R +DYD YL  LL P   R S   +   + E+  ++D+A  N IT  +R+QWW++ 
Sbjct: 33  RESVRKLDYDGYLCGLLLPVKTRPSFFAIRALNAEIATIKDSAHSNQITGKIRMQWWRER 92

Query: 84  FESSTKGLI------AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             +  +          E  +     L   ++++DL  ++F  +++A   D   + +    
Sbjct: 93  IYNLYEVSSSAGAERPEQSTSLLRGLDKAIQEHDLTRRWFERLLDARDQDLDREDVQSLH 152

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           + E YA + +S L++L    L     +A      +AG+A  +  L+   P H  R Q Y 
Sbjct: 153 ELEMYAEQTASSLLYLTLESLGVRDDTADRVAG-HAGVAIGLATLLRGTPYHCSRQQSYL 211

Query: 198 PLDILGAVGLDRESFLSGQNS----DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           P D++   G+  E  L+        D+++  +   A   +++L +AR   + +  +   A
Sbjct: 212 PEDLMNKHGITVEDLLAAVEDSKLGDKVAPVVFDVACRAMEHLHQARSLRKELPSESRSA 271

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQ-LVRPWYMLSSSIKKRF 299
           F+P+  +   LK  +   F   +              +L     +++
Sbjct: 272 FLPLVSSSLYLKDLEAVNFNAFALELQQRNMFQLHLQVLKHYFLRKY 318


>gi|87199831|ref|YP_497088.1| farnesyl-diphosphate farnesyltransferase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87135512|gb|ABD26254.1| farnesyl-diphosphate farnesyltransferase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 323

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 79/274 (28%), Gaps = 10/274 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR------NPITRDMRLQWWKDI 83
                   A  L     R  +  LY +      + D                RLQ  ++ 
Sbjct: 17  KGSKSFAAASHLFDRETRERVWLLYAWCRRCDDIVDAQDHGGALGPQDGMQERLQLVREK 76

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
              +      E+  P    L  + R+  L  +    +IE    D+ +           Y 
Sbjct: 77  TALAFA--GRETGEPAFDALGVVARETGLTLEMAGAVIEGFALDAADWQPHSEADLMRYC 134

Query: 144 FRISSRLIHLATMILDSERYSAS-LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
           + ++  +  +  +++      A  L      G+A  +  +   +      G+ Y PLD +
Sbjct: 135 WHVAGAVGVMMAVVMGVSPDDADTLDRACDLGLAFQLANIARDIEEDDAAGRCYIPLDWM 194

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITE 261
               +     +       ++  +         +   AR     +      A +  + I  
Sbjct: 195 AEEDIPPGEQMKPHYRPALTRIVARMCRTAHVHQCSARIGAARLKGRQRWAILAAAGIYG 254

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            + +  +  G     H    + + +  ++  ++ 
Sbjct: 255 EIAREVERRGDHAWDHRTVVSNVRKLGFIGKAAW 288


>gi|63034219|gb|AAY28421.1| phytoene synthase [Paracoccus haeundaensis]
          Length = 304

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 80/272 (29%), Gaps = 13/272 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQW 79
             +         A  L PP  R     LY +      V D                RL  
Sbjct: 10  EAITQGSQSFATAAKLMPPGIRDDTVMLYAWCRHADDVIDGQALGSRPEAVNDPQARLDG 69

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
            +   ++         ++P    L ++ R++D P  + +D+IE    D            
Sbjct: 70  LR--VDTLAALQGDGPVTPPFAALRAVARRHDFPQAWPMDLIEGFAMDVEARDYRTLDDV 127

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y++ ++  +  +   ++         R     G+A  +  +   +      G+ Y P 
Sbjct: 128 LEYSYHVAGIVGVMMARVMGVRDDPVLDRACD-LGLAFQLTNIARDVIDDARIGRCYLPG 186

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVS 258
           D L   G           S  +   I    +    Y   AR  +  + P   +     + 
Sbjct: 187 DWLDQAGAR---IDGPVPSPELYTVILRLLDEAEPYYASARVGLADLPPRCAWSIAAALR 243

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           I  ++    +  G +      + ++  +   +
Sbjct: 244 IYRAIGLRIRKSGPQAYRQRISTSKAAKIGLL 275


>gi|254805287|ref|YP_003083508.1| putative phytoene synthase [Neisseria meningitidis alpha14]
 gi|254668829|emb|CBA06852.1| putative phytoene synthase [Neisseria meningitidis alpha14]
          Length = 270

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 82/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
            E   +G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKKALWK 270


>gi|323529055|ref|YP_004231207.1| squalene synthase HpnD [Burkholderia sp. CCGE1001]
 gi|323386057|gb|ADX58147.1| squalene synthase HpnD [Burkholderia sp. CCGE1001]
          Length = 282

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 88/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAAQRDAMYQVYAFCRAVDDIADSDMPRAERAAALERWRADIDACYAGAPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S       L   +  + L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  AS----LRALTRHIHTFHLQREDFHAMIDGMAMDAAADICAPDEATLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I   +     L    + G A  +  ++  +       + Y P ++L   G+  ++ 
Sbjct: 139 LSVRIFGMQEEPGRLL-AHHLGRALQLTNILRDIDEDAGINRCYLPRELLAREGIAIKNP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHAQNHG 271
               +   +       A    ++   +   M       V    I   +   +L+     G
Sbjct: 198 QQIADDPSLPRVCATLAARAQEHFAASDAIMDREPRGHVRAPRIMSGVYRVLLERTLERG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F I     +  +L   W +   ++
Sbjct: 258 FDIPRTKVSKPKLHLLWIVARYAL 281


>gi|254192392|ref|ZP_04898831.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei S13]
 gi|254296644|ref|ZP_04964100.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 406e]
 gi|254356213|ref|ZP_04972490.1| putative phytoene synthase [Burkholderia mallei 2002721280]
 gi|148025196|gb|EDK83365.1| putative phytoene synthase [Burkholderia mallei 2002721280]
 gi|157806383|gb|EDO83553.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 406e]
 gi|169649150|gb|EDS81843.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei S13]
          Length = 276

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 82/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 17  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 76

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 77  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 132

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 133 LSVRIFGMPD-EPGRVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 191

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L+ A   G
Sbjct: 192 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 251

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 252 FAPPRAPLRKPRARMLLLAARYAL 275


>gi|295700648|ref|YP_003608541.1| squalene synthase HpnD [Burkholderia sp. CCGE1002]
 gi|295439861|gb|ADG19030.1| squalene synthase HpnD [Burkholderia sp. CCGE1002]
          Length = 282

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 86/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPTAQRDAMYQVYAFCRAVDDIADSDLPRAERAAGLEQWRADIDACYAGQPR 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S       L   +  + L  + F  MI+    D+  D    D    + Y  R++S    
Sbjct: 83  AS----LRALTRHIHTFHLQREDFHAMIDGMAMDAAADICAPDDATLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I         L    + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMREEPGRLL-AHHLGRALQLTNILRDIDEDADINRCYLPRELLAREGIAATDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
               +   +       AE   ++   +   M       V    I   +   +L+     G
Sbjct: 198 RQIADDPTLPRVCATLAERAKQHFAASDAIMDREPRAQVRAPRIMSGVYRVLLERTLERG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F +     +  +L   W +   ++
Sbjct: 258 FDLPRTKVSKPKLRLLWIVARYAL 281


>gi|121635192|ref|YP_975437.1| putative transferase [Neisseria meningitidis FAM18]
 gi|120866898|emb|CAM10657.1| putative transferase [Neisseria meningitidis FAM18]
 gi|325138550|gb|EGC61113.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           ES14902]
          Length = 275

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 80/269 (29%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 10  HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLAS 69

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 70  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 127

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 128 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 187 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 246

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 247 DACRYDVFAQRPVLDKKDWLIMLKRALWK 275


>gi|298368840|ref|ZP_06980158.1| squalene synthase HpnC [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282843|gb|EFI24330.1| squalene synthase HpnC [Neisseria sp. oral taxon 014 str. F0314]
          Length = 271

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 83/271 (30%), Gaps = 6/271 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
           +   +  +  +L P   R  +  +Y F      + D         +R L   +   +   
Sbjct: 4   EHYENFPVGSILLPRRLRKPIHAVYAFARTADDIADEGETADAERLRGLDDLQKELDRIY 63

Query: 89  KGLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
            G I    +     L +  ++ + +P + F D++ A   D       +  +   Y  R +
Sbjct: 64  TGEI--PQTALMKRLQNEAIKPFAMPPEPFYDLLSAFRQDVVKKRYQNFGELVDYCRRSA 121

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           + +  +   +       +          A  +      + + + +G++Y P + L    +
Sbjct: 122 NPVGRMMLHLYGENDPVSIAH-SDGICTALQLINFWQDVALDWQKGRVYIPQEDLAKYKV 180

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKH 266
             E    G+        +    E   + L       + +   +      + +    +L+ 
Sbjct: 181 SEEQIAEGRADFAFQRLMAHECERTFQILKAGSPLGKRLRGRIGFELRMIIVGGQIILQK 240

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                + +       ++      +  + +KK
Sbjct: 241 LDGCKYDMFGRRPILDKKDWLIILKRAFLKK 271


>gi|56551766|ref|YP_162605.1| squalene synthase HpnD [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762394|ref|ZP_04760473.1| squalene synthase HpnD [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260752663|ref|YP_003225556.1| squalene synthase HpnD [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|6466215|gb|AAF12831.1|AF203881_4 phytone synthase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|4388701|emb|CAA04733.1| HpnD protein [Zymomonas mobilis]
 gi|56543340|gb|AAV89494.1| squalene synthase HpnD [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373081|gb|EER62730.1| squalene synthase HpnD [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258552026|gb|ACV74972.1| squalene synthase HpnD [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 291

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 81/255 (31%), Gaps = 9/255 (3%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKG 90
               Y+   + PP  R ++  +Y F  ++  + D    +   R   L  W+    +   G
Sbjct: 29  SSSFYIGMRVLPPAEREAMYAIYNFCRQVDDIADDLEGSQEERKQALDAWRHDINALYAG 88

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS-IFDCKQFEHYAFRISSR 149
                    +  L   V ++ L  + F+ +I+    D        D    + Y  R++S 
Sbjct: 89  EPCGQ----AAFLKEPVARFHLRQEDFIAVIDGMAMDLKGPIVFPDEATLDLYCDRVASA 144

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           +  L+  +   +          + G A  +  ++  +      G+ Y P + L   G+  
Sbjct: 145 VGRLSVYVFGMDPNIGESLAY-HLGRALQLTNILRDIDEDAEIGRCYLPREPLEKAGI-P 202

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQ 268
                     R+    +  A     +   +   +       +    +  +   ++L+   
Sbjct: 203 LDIEKALADPRLDKVCRDLAWQAEGHYAASDHIIHNRPKGYLIAPRLMAAAYSALLRKML 262

Query: 269 NHGFKIVSHSHTPNQ 283
             G+K        N+
Sbjct: 263 AQGWKNPRKKVKHNK 277


>gi|316932974|ref|YP_004107956.1| squalene synthase HpnD [Rhodopseudomonas palustris DX-1]
 gi|315600688|gb|ADU43223.1| squalene synthase HpnD [Rhodopseudomonas palustris DX-1]
          Length = 279

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 86/264 (32%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D+ R    R   LQ W++   +  +G   
Sbjct: 20  SFYAAMRILPRPQREAMFQVYSFCRFVDDIADSDRPREQRVAELQQWREDIAALYRGAPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   +    +R + L  + F  +I+    D   D    D    + Y  R++S +  
Sbjct: 80  ----PRLADYQQSLRTFGLKREDFEAIIDGMEMDVDADIRAPDEATLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +      G+LY P ++L   G+     
Sbjct: 136 LSVRIFGLPEDDGIE-LSHHLGRALQLTNILRDIDEDAGIGRLYLPSELLHKAGITATDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
                   +           L +   A + M       V    I      S+L+     G
Sbjct: 195 RVVAAHPALPSVCAPLVNRALAHFAAADKVMNRNPRRLVKAPRIMGKYYYSILQLLIARG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +  +   +L  +I
Sbjct: 255 FAAPRTPVKLGKASKIAILLQYAI 278


>gi|288575736|ref|ZP_05977497.2| squalene synthase HpnC [Neisseria mucosa ATCC 25996]
 gi|288567203|gb|EFC88763.1| squalene synthase HpnC [Neisseria mucosa ATCC 25996]
          Length = 271

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 77/270 (28%), Gaps = 6/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESSTK 89
              +  +  L+ P   R     +Y F      + D        R   L   K   +    
Sbjct: 5   HYENFPVGSLVMPRRLRKPTHAVYAFARTADDLADEGNAEADERLRALDELKSELDRI-- 62

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                 ++P    L    +  + LP Q F D++ A   D       D      Y  R ++
Sbjct: 63  QHGETPLTPLMQRLQREAIAPFKLPLQPFYDLLSAFSQDVVKTRYQDFGDLIDYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +    S+        A  +      + + + +G++Y P D L    + 
Sbjct: 123 PIGRIMLHLY-GQTDEVSIAQSDGICTALQLINFWQDVAVDWQKGRVYIPQDDLEKFKVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKHA 267
                 G+        +        + L       + +   +      + +    +L+  
Sbjct: 182 EAQIAEGKADFAFQRLMSYECNRAFQMLKGGSPLGKTLKGRLGFELRMIIVGGQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               + +       ++      +  + +KK
Sbjct: 242 DGCKYDVFMQRPVLDKKDWLIILKRAFLKK 271


>gi|325144788|gb|EGC67079.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           M01-240013]
          Length = 270

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EGQIAEGRADAAFQRLMAYECRCAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKRALWK 270


>gi|114620979|ref|XP_519865.2| PREDICTED: similar to putative phytoene synthase isoform 2 [Pan
           troglodytes]
 gi|119612140|gb|EAW91734.1| chromosome 8 open reading frame 38, isoform CRA_b [Homo sapiens]
          Length = 241

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 3/235 (1%)

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D+        MR+Q+WK   E            P ++EL   V++++L  ++ + +++  
Sbjct: 10  DSVSEKTIGLMRMQFWKKTVEDIYCDNP--PHQPVAIELWKAVKRHNLTKRWLMKIVDER 67

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             +  + +  + K+ E+YA    S L++L   IL  +   A      + G AQ I   + 
Sbjct: 68  EKNLDDKAYRNIKELENYAENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLR 126

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
             P H  R +++ P+DI    G+ +E FL       +   I   A     +L  AR   +
Sbjct: 127 ATPYHGSRRKVFLPMDICMLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHK 186

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +    FPAF+     E  LK  Q   F I   S      + P Y+   S +K +
Sbjct: 187 TVPVKAFPAFLQTVSLEDFLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY 241


>gi|325198643|gb|ADY94099.1| phytoene/squalene synthetase family protein [Neisseria meningitidis
           G2136]
          Length = 270

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPIHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKRALWK 270


>gi|53723680|ref|YP_103126.1| phytoene synthase [Burkholderia mallei ATCC 23344]
 gi|76809843|ref|YP_333894.1| phytoene synthase [Burkholderia pseudomallei 1710b]
 gi|52427103|gb|AAU47696.1| phytoene synthase, putative [Burkholderia mallei ATCC 23344]
 gi|76579296|gb|ABA48771.1| phytoene synthase, putative [Burkholderia pseudomallei 1710b]
          Length = 307

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 83/277 (29%), Gaps = 4/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 34  EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 93

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 94  KELAALA---SGHPSHPVSQALAAHHPDIARETDALRTLVAGYGMDLEQARYLDFANLRR 150

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           YA +       L          +   R  +  G A  + Q +  L     +G++Y P+D 
Sbjct: 151 YADQTGGMFAALVASASAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVPIDE 210

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+     L+ + S   +  ++         L  +   +               ++ 
Sbjct: 211 LQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALGALA 270

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +  GF+++        + + W    ++ ++
Sbjct: 271 LAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 307


>gi|254186966|ref|ZP_04893481.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157934649|gb|EDO90319.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 276

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 82/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 17  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 76

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 77  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEAMLDLYCDRVASSAGR 132

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 133 LSVRIFGMPD-EPGRVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 191

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L+ A   G
Sbjct: 192 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 251

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 252 FAPPRAPLRKPRARMLLLAARYAL 275


>gi|146339635|ref|YP_001204683.1| putative phytoene synthase [Bradyrhizobium sp. ORS278]
 gi|146192441|emb|CAL76446.1| Putative phytoene synthase [Bradyrhizobium sp. ORS278]
          Length = 279

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 94/264 (35%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F  E+  + D+      R   LQ W+D  ++  +G   
Sbjct: 20  SFYAAMRILPRAQRDAMFQVYSFCREVDDIADSDGPRPERLAALQKWRDDIDALYQGNPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   + ++ V+ + L  + FL +I+    D   +    D    + Y  R++S +  
Sbjct: 80  ----PRLRDYVASVKTFGLKREDFLAIIDGMEMDVPQEIRAPDLATLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I         L +  + G A  +  ++  +      G+LY P + L   G+  +  
Sbjct: 136 LSVRIFGMPEEDGIL-LAHHLGRALQLTNILRDIDEDAAIGRLYLPREALLFAGITGDDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEM-RYILPDVFPAFIPVSITESVLKHAQNHG 271
                   +       A     +  KA E M R     V    I      +V       G
Sbjct: 195 AKVTQERALPKVCNSVAVRAKTHFEKADEIMRRNRRRAVRAPRIMSKYYRAVFDLLMARG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F +       ++L +   +L  ++
Sbjct: 255 FALPREPVRVSKLTKISIILRYAL 278


>gi|319410751|emb|CBY91134.1| putative phytoene synthase [Neisseria meningitidis WUE 2594]
          Length = 270

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 79/269 (29%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L   +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLDALRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKRALWK 270


>gi|161870381|ref|YP_001599553.1| phytoene synthase-related protein [Neisseria meningitidis 053442]
 gi|161595934|gb|ABX73594.1| phytoene synthase-related protein [Neisseria meningitidis 053442]
          Length = 270

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLQRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D       +  +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYGNFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKKALWK 270


>gi|163853622|ref|YP_001641665.1| squalene/phytoene synthase [Methylobacterium extorquens PA1]
 gi|218532481|ref|YP_002423297.1| Squalene/phytoene synthase [Methylobacterium chloromethanicum CM4]
 gi|240141044|ref|YP_002965524.1| terpenoid synthase, putative phytoene synthase [Methylobacterium
           extorquens AM1]
 gi|254563558|ref|YP_003070653.1| terpenoid synthase, phytoene synthase [Methylobacterium extorquens
           DM4]
 gi|163665227|gb|ABY32594.1| Squalene/phytoene synthase [Methylobacterium extorquens PA1]
 gi|218524784|gb|ACK85369.1| Squalene/phytoene synthase [Methylobacterium chloromethanicum CM4]
 gi|240011021|gb|ACS42247.1| terpenoid synthase, putative phytoene synthase [Methylobacterium
           extorquens AM1]
 gi|254270836|emb|CAX26841.1| terpenoid synthase, putative phytoene synthase [Methylobacterium
           extorquens DM4]
          Length = 298

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 2/266 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +         +R+ D DRY A L +P  +R  L  L  F   + RVR+ A NP+  ++R
Sbjct: 19  LAFAFRHCEELVRESDPDRYFAALFAPAAFRPHLFALSAFSLTIARVREAASNPMAGEIR 78

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  +   +G +    +P +  L   +    L  Q F+D+I+A  FD Y+D +   
Sbjct: 79  LQWWRDALQGEARGDV--RANPVAAALDDAIVTRRLGRQPFVDLIDARVFDLYDDPMPRV 136

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI L+ ++L             +AG+A  I  L+  LP H  +GQ+Y
Sbjct: 137 NDLEGYCGETASALIRLSGLVLADGAEPGGAAAAGHAGVAYGITGLLRALPWHARQGQVY 196

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L   G+ RE  +SG+    +         L  ++L         I P   PAF+P
Sbjct: 197 LPGDLLRQNGVTREDIVSGRGGPGLVRTCAELRALARRHLAAYEAARGTIAPAARPAFLP 256

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPN 282
            ++ E  L   +  G+  ++      
Sbjct: 257 TALVEPYLAAMERAGYDPLNSVIEIP 282


>gi|46114448|ref|XP_383242.1| hypothetical protein FG03066.1 [Gibberella zeae PH-1]
          Length = 581

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 104/322 (32%), Gaps = 31/322 (9%)

Query: 1   MVLK--FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHT 58
           +V++   L ++   +E+I     +  +  LR      YLA        RI L  LY F  
Sbjct: 259 LVIRALLLPEDKYDQERI--SGLVSAVDLLRKKSRSFYLASGAFEGRLRIDLIRLYAFCR 316

Query: 59  ELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLS------------I 106
               + D A +       ++  ++    + K    E ISP   E ++             
Sbjct: 317 AADDLVDEAPSLDDSRSSIEKLREFLNIAYKENEDEEISPRLREFVTSNFPEMFHMALLQ 376

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDS 160
           +  + LP Q   D+++    D   D       I   +  + Y  R++  +  L   ++  
Sbjct: 377 LPTFYLPKQPLDDLLKGFDTDLLFDRKSGKFPIETTEDLDIYGSRVAGTVAELCNHLILY 436

Query: 161 ERYSASLRVIKY--------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
               +    ++          GIA     +   + +     ++Y PL  L    L  E  
Sbjct: 437 HTPESVSPEVQREVVASGQEMGIALQYVNIARDIKVDAEIDRIYLPLSWLKEAQLTPEDV 496

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHG 271
           +   +   I    +   +   +    A+  +  +  +   P  + V     + +  +  G
Sbjct: 497 MQQPHGPTIESLRQKLLDRAFEKYDAAKGAIDKLPSEGKGPIRVAVESYMEIGRVLRETG 556

Query: 272 FKIVSHSHTPNQLVRPWYMLSS 293
             +     T  +  R     S+
Sbjct: 557 PVMKKGRATVPKSRRIRVAWSA 578


>gi|67639612|ref|ZP_00438456.1| squalene/phytoene synthase family protein [Burkholderia mallei GB8
           horse 4]
 gi|76818304|ref|YP_336648.1| squalene/phytoene synthase [Burkholderia pseudomallei 1710b]
 gi|166998965|ref|ZP_02264815.1| putative phytoene synthase [Burkholderia mallei PRL-20]
 gi|167829947|ref|ZP_02461418.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 9]
 gi|167908349|ref|ZP_02495554.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167916702|ref|ZP_02503793.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 112]
 gi|167924547|ref|ZP_02511638.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei BCC215]
 gi|217424391|ref|ZP_03455890.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 576]
 gi|226199274|ref|ZP_03794834.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|254205497|ref|ZP_04911850.1| putative phytoene synthase [Burkholderia mallei JHU]
 gi|76582777|gb|ABA52251.1| squalene/phytoene synthase [Burkholderia pseudomallei 1710b]
 gi|147755083|gb|EDK62147.1| putative phytoene synthase [Burkholderia mallei JHU]
 gi|217392856|gb|EEC32879.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 576]
 gi|225928681|gb|EEH24708.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|238520185|gb|EEP83647.1| squalene/phytoene synthase family protein [Burkholderia mallei GB8
           horse 4]
 gi|243064787|gb|EES46973.1| putative phytoene synthase [Burkholderia mallei PRL-20]
          Length = 275

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 82/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 16  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 76  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 132 LSVRIFGMPD-EPGRVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L+ A   G
Sbjct: 191 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 250

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 251 FAPPRAPLRKPRARMLLLAARYAL 274


>gi|294010175|ref|YP_003543635.1| phytoene/squalene synthetase [Sphingobium japonicum UT26S]
 gi|292673505|dbj|BAI95023.1| phytoene/squalene synthetase [Sphingobium japonicum UT26S]
          Length = 317

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 89/277 (32%), Gaps = 10/277 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR------NPITRDMRLQ 78
             N+        LA  L     R     LY +  +   + D                RL 
Sbjct: 16  RENIARGSKSFALASKLFDRPTRERAWLLYAWCRKCDDIADGQDHGGTMRGVADGQARLS 75

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
             + + +++ +G       P       ++R+  +P +Y  D+IE    D+          
Sbjct: 76  TIRVLTDAALQGEPT--GDPAFDGFGLVMRECAIPERYAHDLIEGFALDAREWRPRSEAD 133

Query: 139 FEHYAFRISSRLIHLATMILDSER-YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
              Y + ++  +  +  +++  +    A+L      G+A  +  +   +      G+ Y 
Sbjct: 134 MLRYCYHVAGAVGCMMAILMGVDPGDEATLDRACDLGLAFQLANIARDISEDEAAGRCYL 193

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P + L  + +     +      R+++  +  A+    Y   AR     + P    A +  
Sbjct: 194 PEEWLVEMDVPPGEHMKPWVRPRLAILARRLADRAAGYEESARHGTGALPPRSAWAVLAA 253

Query: 258 S-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           + I   + +     G           +  +  ++L +
Sbjct: 254 AGIYGGIAREVARRGEHAWDRRVVTPKGDKLGWVLRA 290


>gi|182680058|ref|YP_001834204.1| squalene synthase HpnD [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635941|gb|ACB96715.1| squalene synthase HpnD [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 285

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 86/261 (32%), Gaps = 7/261 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D       R   L  W+   ++  +G I 
Sbjct: 26  SFYAAMRILPAPQREAMFQIYAFCRAVDDIADEEGPLPERAQALLDWRADIDALYRGAIP 85

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS-IFDCKQFEHYAFRISSRLIH 152
            +     V L   +  + L  + F+ +I+    D  +   I D    + Y  R++S +  
Sbjct: 86  RAA---LVPLSETIHAFGLAREDFVAVIDGMEMDLTDRVAIPDFATLDLYCDRVASAVGR 142

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  +              + G A  +  ++  +     R +LY P D+L A G+  E  
Sbjct: 143 LSVRVFGVPETEGQNLAY-HLGRAFQLTNILRDIDEDAERQRLYLPRDLLIAAGIKPE-I 200

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            +   S  +  A +   +   K+       M            I      ++L   +  G
Sbjct: 201 EAVLTSPALGQACRSILDAAAKHFAAGAAIMDRCPRKSVRAPRIMAQAYGAILTRLEARG 260

Query: 272 FKIVSHSHTPNQLVRPWYMLS 292
           F          +      +L 
Sbjct: 261 FAPPRERVKTPKSQILLALLR 281


>gi|149372416|ref|ZP_01891604.1| phytoene synthase [unidentified eubacterium SCB49]
 gi|149354806|gb|EDM43369.1| phytoene synthase [unidentified eubacterium SCB49]
          Length = 280

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 83/290 (28%), Gaps = 25/290 (8%)

Query: 14  EKIFSRDSLFVLRNLR-DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           ++IF   S    +++         LA  +  P  R  +  +Y F      + D+  +   
Sbjct: 2   KEIFDNISQTCSKSVTNAYSTSFSLATKMLAPTIRQDIYNIYGFVRFADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +   +     E         S++P        V +Y++  +     +++   D     
Sbjct: 62  ATL---FANFETEMDYALKHKISLNPILNSFQYTVTKYNIDRELINSFMDSMRLDLTKSD 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
                ++++Y +  +  +  +   +           + +     G A      +  L   
Sbjct: 119 YLTEDEYKNYIYGSADVVGLMCLKVFVKGDLQKFDELKESAMSLGSAFQKVNFLRDLKDD 178

Query: 190 YH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L A              +    A     E   +   K  + +  +  
Sbjct: 179 FEGLNRTYFPNTNLNA------------LDEASKTA---IIEDIKEDFSKGYKGILKLPT 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIK 296
           +  F  F+       +L   Q      I +         +   +  S +K
Sbjct: 224 EAKFGVFMAYRYYNRLLTKLQKTPAIDIKNTRIRVPDYEKFGLLTRSYVK 273


>gi|260599336|ref|YP_003211907.1| Phytoene synthase [Cronobacter turicensis z3032]
 gi|260218513|emb|CBA33703.1| Phytoene synthase [Cronobacter turicensis z3032]
          Length = 323

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 73/283 (25%), Gaps = 12/283 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
                  +         A  L     R S   LY +      V D              T
Sbjct: 7   LTHATETIEAGSKSFATASKLFDAKTRRSALMLYAWCRHCDDVTDGQTLGFKATDAPTDT 66

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              R+   + +   +  G       P       +  ++ +P    LD +E    D  ++ 
Sbjct: 67  PQARIALLRALTLEAYAGKPMRE--PNFAAFQEVALEHQIPPALALDHLEGFAMDVRDER 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                    Y + ++  +  +   ++      A L      G+A  +  +   +      
Sbjct: 125 YHTFDDTLRYCYHVAGVVGLMMARVMGVRD-EAVLDRACDLGLAFQLTNIARDIVEDAAI 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P   L   GL  ++         ++       E    Y   AR  +  +      
Sbjct: 184 GRCYLPEAWLKEEGLRADTLADRARRPALARLAARLVEEAEPYYASARAGLAGLPLRSAW 243

Query: 253 AFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           A      +   +    +  G          ++  +   +   +
Sbjct: 244 AIATAHGVYREIGVKVKRAGVNAWDKRQGTSKAEKLALLAKGA 286


>gi|229827223|ref|ZP_04453292.1| hypothetical protein GCWU000182_02609 [Abiotrophia defectiva ATCC
           49176]
 gi|229788841|gb|EEP24955.1| hypothetical protein GCWU000182_02609 [Abiotrophia defectiva ATCC
           49176]
          Length = 321

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 87/300 (29%), Gaps = 25/300 (8%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRD 74
                     + +R      Y A         + ++ +Y F      + D  +++   R 
Sbjct: 2   NLEASYRAAKKVMRKNASSFYAAFEKIERAKFLDIAAVYAFCRYADDLADTESQSKAMRL 61

Query: 75  MRLQWWKDIFESSTKGLIAESISP---FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
             L   ++  +S               +     + +R   +P +  L  I+    D    
Sbjct: 62  QLLNLLEEDVKSLYNSSSQSENYEKYAWWTAFENTIRIRKIPLEALLGQIDGQRSDINFK 121

Query: 132 SIFDCKQFEHYAFRISSRLIHL-ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
            I +      Y  +++  +  + A M+   +       + +  G+A  I  ++  +    
Sbjct: 122 IIENKDDLIIYCKKVAGTVGLMLAPMLRGDKADERYELICEDLGVAMQITNILRDVGEDL 181

Query: 191 H-RGQLYFPLDILGAVGLDRESFLSGQNS------------------DRISLAIKIFAEL 231
             R ++Y P   +    + RE   +   S                  D+     +  A L
Sbjct: 182 RNRNRIYIPQTFMKKYDVTREELENLSTSQPSGKSLHSFFQPNFKVEDKFVHLWEDMALL 241

Query: 232 GLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              Y     + +     D  FP        +++L   + + +   +     +   +   +
Sbjct: 242 SEYYYDGFYKHLYMFNSDALFPVTAAAVFYQAILDEVRKNNYNCFTKRCYTSTKRKSELL 301


>gi|319783202|ref|YP_004142678.1| squalene/phytoene synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169090|gb|ADV12628.1| Squalene/phytoene synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 272

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 5/257 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             +R  D+DRYL  L +P   R +L  LY F+ E+  +RD     +  ++RLQWW+D+  
Sbjct: 2   DAVRAADHDRYLTALYAPDGKRDALFSLYAFNAEISGIRDRIHEALPGEVRLQWWRDVIA 61

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
           +  +        P +  + + +  + LP   F +M++A  FD Y+D +      E Y   
Sbjct: 62  AGGEAGAG---HPTAEAVNATIATFGLPKPAFENMLDARIFDLYDDPMPSRTDLEGYCGE 118

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            ++ LI LA M+LD         +   AG AQ +  L+  LP+H  RGQ + P DIL A 
Sbjct: 119 TAAALIQLAAMVLDPGEAPRFAELAGRAGCAQAMTGLLLLLPLHRQRGQCFVPADILAAA 178

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK 265
           G   E F++G        A+     L  ++L    +    +   + PAF+P++++ + L 
Sbjct: 179 GSSPEEFVTGDGGPGAKRAVAAMMALAREHLSAFEQGAPALPVSLRPAFLPLALSRAYLG 238

Query: 266 HAQNHGFKIVSHSHTPN 282
             +      +      +
Sbjct: 239 KME--NGSPLEGVARLS 253


>gi|327482510|gb|AEA85820.1| phytoene synthase [Pseudomonas stutzeri DSM 4166]
          Length = 308

 Score =  145 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 88/283 (31%), Gaps = 12/283 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARN 69
            +      + +         A  L     R S   LY +      V D           +
Sbjct: 3   DQVIDHSTQAINVGSKSFAAAAKLFDERTRQSAVMLYAWCRHCDDVIDGQTLGHGQVEGD 62

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
             + + RL    D+ E +  G       P       +++++ +P  + L+ +     D  
Sbjct: 63  RNSGEARLAELVDLTERAYAGEPM--ADPAFAAFQQVIQRHRIPKAHPLEHLAGFRMDVQ 120

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                       Y +R++  +  +   ++ +E      R     G+A  +  +   +   
Sbjct: 121 GYRYQTLDDTLLYCYRVAGVVGLMMARVMGAEAEPTLDRACD-LGLAFQLTNIARDIVED 179

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-P 248
              G++Y P + L  VG+  +     Q+   ++       +L   Y   A + +R +   
Sbjct: 180 AQIGRVYLPAEWLAEVGIPEDEVALPQHRAALATLAARLVDLAEPYYRSASQGLRDLPLR 239

Query: 249 DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             +       +   +    +  G        + ++  +  ++L
Sbjct: 240 SAWSIATAHGVYRQIGVEVKARGAAAWDARVSTSKGQKLQFLL 282


>gi|37528171|ref|NP_931516.1| phytoene synthase [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36787608|emb|CAE16715.1| phytoene synthase [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 308

 Score =  145 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 84/285 (29%), Gaps = 12/285 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------NPIT 72
              V + +            L     R S   LY +      + D           +  +
Sbjct: 6   LKHVTQIMEQGSKSFASVTRLFDTATRHSTMMLYAWCRYCDDIIDGQELGRQISSVDKYS 65

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              +LQ  + + + +  GL      P      ++    ++P Q   + +E    D   + 
Sbjct: 66  AREKLQMLQYLTKQAYDGLPMTE--PAFAAFQTVALSNEIPQQQAFEHLEGFAMDVLCEP 123

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                    Y + ++  +  +   ++     S   R     GIA  +  +   +      
Sbjct: 124 YRTLDDTLRYCYHVAGVVGLMMARVMGVREASVLDRACD-LGIAFQLTNIARDIIEDAKA 182

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y PL+ L   GL  ++ +  +N   ++            Y   A   +  +      
Sbjct: 183 GRCYLPLEWLHQEGLMPDTLIYTENRPALARVASRLIVEAESYYTSALTGLVGLPLRSAW 242

Query: 253 AFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                  I   +    Q  G +        N+  +   +++ ++K
Sbjct: 243 VIASAHGIYREIGIKVQQAGVRAWECRQRTNRGEKVTLLMAGAMK 287


>gi|86739533|ref|YP_479933.1| squalene/phytoene synthase [Frankia sp. CcI3]
 gi|86566395|gb|ABD10204.1| Squalene/phytoene synthase [Frankia sp. CcI3]
          Length = 304

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 88/285 (30%), Gaps = 10/285 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             +          ++   +      L P   R +LS +Y     L  + D       +  
Sbjct: 13  TVAEAYAACEAVTKEAARNFSYGIRLLPAEKRGALSAVYALARRLDDIGDGDLPEEAKFA 72

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L   +   E         S  P  V L    R++ +P + F+++ +    D    +   
Sbjct: 73  GLAQVRAEVEE---LGTNSSDDPVFVALADAARRFPIPLEAFIELADGVESDVRGTTYDT 129

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYHR 192
                 Y   ++  +  L+  I  SER ++      V    G+A     ++  +      
Sbjct: 130 FDDLVGYCRLVAGTIGRLSLGIFGSERATSHRDASGVADALGVALQQTNILRDVREDLLG 189

Query: 193 GQLYFPLDILGAVGLDRESFLSGQ---NSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           G++Y P   L A G++ E   +G+     D +   ++  A+   ++  +    +  +   
Sbjct: 190 GRIYLPRQELKAAGVELEVDATGRLGGPPDALIAYLRTSAQRAEEWYGRGLVLLDLLDRR 249

Query: 250 VFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                     I   + +  +     ++          +      S
Sbjct: 250 SAACCGAMAGIYLRLNRRIKTDPSAVLDRRLALPGWEKAVVAARS 294


>gi|67642030|ref|ZP_00440793.1| putative phytoene synthase [Burkholderia mallei GB8 horse 4]
 gi|121600157|ref|YP_993291.1| putative phytoene synthase [Burkholderia mallei SAVP1]
 gi|124385224|ref|YP_001029266.1| putative phytoene synthase [Burkholderia mallei NCTC 10229]
 gi|126448449|ref|YP_001080799.1| putative phytoene synthase [Burkholderia mallei NCTC 10247]
 gi|166998684|ref|ZP_02264538.1| putative phytoene synthase [Burkholderia mallei PRL-20]
 gi|254178337|ref|ZP_04884992.1| putative phytoene synthase [Burkholderia mallei ATCC 10399]
 gi|254189203|ref|ZP_04895714.1| putative phytoene synthase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254197894|ref|ZP_04904316.1| putative phytoene synthase [Burkholderia pseudomallei S13]
 gi|254200078|ref|ZP_04906444.1| putative phytoene synthase [Burkholderia mallei FMH]
 gi|254206414|ref|ZP_04912766.1| putative phytoene synthase [Burkholderia mallei JHU]
 gi|254260404|ref|ZP_04951458.1| putative phytoene synthase [Burkholderia pseudomallei 1710a]
 gi|254358176|ref|ZP_04974449.1| putative phytoene synthase [Burkholderia mallei 2002721280]
 gi|121228967|gb|ABM51485.1| putative phytoene synthase [Burkholderia mallei SAVP1]
 gi|124293244|gb|ABN02513.1| putative phytoene synthase [Burkholderia mallei NCTC 10229]
 gi|126241319|gb|ABO04412.1| putative phytoene synthase [Burkholderia mallei NCTC 10247]
 gi|147749674|gb|EDK56748.1| putative phytoene synthase [Burkholderia mallei FMH]
 gi|147753857|gb|EDK60922.1| putative phytoene synthase [Burkholderia mallei JHU]
 gi|148027303|gb|EDK85324.1| putative phytoene synthase [Burkholderia mallei 2002721280]
 gi|157936882|gb|EDO92552.1| putative phytoene synthase [Burkholderia pseudomallei Pasteur
           52237]
 gi|160699376|gb|EDP89346.1| putative phytoene synthase [Burkholderia mallei ATCC 10399]
 gi|169654635|gb|EDS87328.1| putative phytoene synthase [Burkholderia pseudomallei S13]
 gi|238523083|gb|EEP86524.1| putative phytoene synthase [Burkholderia mallei GB8 horse 4]
 gi|243065041|gb|EES47227.1| putative phytoene synthase [Burkholderia mallei PRL-20]
 gi|254219093|gb|EET08477.1| putative phytoene synthase [Burkholderia pseudomallei 1710a]
          Length = 278

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 83/277 (29%), Gaps = 4/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALA---SGHPSHPVSQALAAHHPDIARETDALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           YA +       L          +   R  +  G A  + Q +  L     +G++Y P+D 
Sbjct: 122 YADQTGGMFAALVASASAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVPIDE 181

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+     L+ + S   +  ++         L  +   +               ++ 
Sbjct: 182 LQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALGALA 241

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 278


>gi|92118194|ref|YP_577923.1| squalene/phytoene synthase [Nitrobacter hamburgensis X14]
 gi|91801088|gb|ABE63463.1| Squalene/phytoene synthase [Nitrobacter hamburgensis X14]
          Length = 278

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 94/263 (35%), Gaps = 7/263 (2%)

Query: 35  RYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAE 94
            Y A  + P   R ++  +Y F   +  + D+      R   LQ W+D  ++  +G   E
Sbjct: 20  FYAAMRILPRAQREAMFQIYTFCRYVDDIADSDSPRPERRAALQQWRDDIDALYQGRAPE 79

Query: 95  SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD-SYNDSIFDCKQFEHYAFRISSRLIHL 153
                  +  + V  +DL  + FL +I+    D   +    D    + Y  R++S +  L
Sbjct: 80  R----LRDYDASVSAFDLRREDFLAIIDGMEMDVLADIRAPDDATLDLYCDRVASAVGRL 135

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
           +  +         L +  + G A  +  ++  L      G+LY P + L    +      
Sbjct: 136 SVRVFGLPEQDGIL-LAHHLGRALQLTNILRDLDEDAALGRLYLPREGLLRADIGSFDPA 194

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHGF 272
           +  ++  +        E    +  ++ E M            I      ++L   ++ GF
Sbjct: 195 AVISNPALPQVCAPLVERAQAHFVESDEIMNRNPRRAVRAPRIMSRYYHAILDMLEHRGF 254

Query: 273 KIVSHSHTPNQLVRPWYMLSSSI 295
           ++       +Q  +   +L  ++
Sbjct: 255 QLPRSPVHLSQAAKIAIVLRYAL 277


>gi|158317465|ref|YP_001509973.1| squalene/phytoene synthase [Frankia sp. EAN1pec]
 gi|158112870|gb|ABW15067.1| Squalene/phytoene synthase [Frankia sp. EAN1pec]
          Length = 379

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 78/254 (30%), Gaps = 6/254 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
           +  +A  L P   R  L+ LY F   +  + D A  P  R   L       E        
Sbjct: 37  NFPVASRLLPAATRDHLNALYVFGRLVDDIGDEA--PGDRLALLDELAADLELI--WSGG 92

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
           E   P    L   VR  DLP + F  +++A+  D         +    Y    +  +  +
Sbjct: 93  EPKLPVHRRLAHTVRACDLPAEPFRRLVQANQQDQIVTRYDTYEDLVQYCTLSADPIGRM 152

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
              +       A + +      A  + +    +      G++Y PL+ L A G+      
Sbjct: 153 VLGVFGLAT-PARIALSDRICTALQLAEHFQDVAEDLAAGRIYVPLEDLDAFGVTEADLA 211

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESVLKHAQNHGF 272
           +   S  +   +          L +    +  +   +  A    V    + L   +   +
Sbjct: 212 APVASPAVRHLMAFEVARARTLLDQGAPLVNLVGGRLRLAMAGFVGGGRAALDAIRRADY 271

Query: 273 KIVSHSHTPNQLVR 286
            ++  +    +   
Sbjct: 272 DMLGGAPKAPKPRM 285


>gi|330962417|gb|EGH62677.1| hypothetical protein PMA4326_28072 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 317

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 86/287 (29%), Gaps = 12/287 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR------- 73
               +R++         A  L  P  R S   LY +      V D               
Sbjct: 12  LDHAIRSITVGSKSFAAASRLFDPHTRRSAVMLYAWCRHCDDVIDGQEAGRPASTVSDTQ 71

Query: 74  -DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            D RLQ       +   GL      P       +V++++L   Y LD +     D     
Sbjct: 72  IDQRLQGLLAQTHAVYAGLPV--SDPAFAAFKDVVKRHNLRQDYALDHLAGFAMDVQQRD 129

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               +    Y + ++  +  +   ++         R     G+A  +  +   +      
Sbjct: 130 YRCLQDTLEYCYHVAGVVGLMMGQVMGVRDDQTLDRACD-LGMAFQLTNIARDIVEDAGI 188

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVF 251
           G+ Y P D L  + +  +        DR+++      +L   Y   A   +  +     +
Sbjct: 189 GRCYLPADWLDEMAIPADRLTDPAYRDRLAVLAGRLVDLAEPYYVSAEAGIAALPWRSAW 248

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                 ++   +    +  G        + ++L +   + +++ +  
Sbjct: 249 AVATASAVYREIGVKVRKAGASAWDARVSTSKLDKIRLVTAAAWRAT 295


>gi|156932561|ref|YP_001436477.1| hypothetical protein ESA_00342 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530815|gb|ABU75641.1| hypothetical protein ESA_00342 [Cronobacter sakazakii ATCC BAA-894]
          Length = 323

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 74/285 (25%), Gaps = 12/285 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------NPIT 72
                  +         A  L     R S   LY +      V D              T
Sbjct: 7   LTHATETIEAGSKSFATASKLFDAKTRRSALMLYAWCRHCDDVTDGQSLGFRTADAPTDT 66

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              R+   + +   +  G       P       +   + +P    LD +E    D  ++ 
Sbjct: 67  PQARIALLRALTLEAYAGKPMRE--PNFAAFQEVALAHQIPPALALDHLEGFAMDVRDER 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                    Y + ++  +  +   ++      A L      G+A  +  +   +      
Sbjct: 125 YHTFDDTLRYCYHVAGVVGLMMARVMSVRD-EAVLDRACDLGLAFQLTNIARDIVEDAAI 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P   L   GL  ++     +   ++       +    Y   AR  +  +      
Sbjct: 184 GRCYLPEVWLQEEGLRADTLTDRAHRPALARLAARLVDEAEPYYASARAGLAGLPLRSAW 243

Query: 253 AFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           A      +   +    +  G          ++  +   +   ++ 
Sbjct: 244 AIATAHGVYREIGVKVKRAGVNAWETRQGTSKTEKLALLAKGAVM 288


>gi|39936803|ref|NP_949079.1| squalene/phytoene synthase [Rhodopseudomonas palustris CGA009]
 gi|39650660|emb|CAE29183.1| putative poly-isoprenyl transferase [Rhodopseudomonas palustris
           CGA009]
          Length = 279

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 88/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D+ R    R   LQ W+D   +  +G   
Sbjct: 20  SFYAAMRILPRPQREAMFQVYSFCRFVDDIADSDRPREQRVAELQQWRDDIAALYRGAPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   +    +R + L  + F  +I+    D   D    D    + Y  R++S +  
Sbjct: 80  ----PRLADYQESLRTFGLKREDFEAIIDGMEMDVDADIRAPDEATLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +      G+LY P ++L  VG+     
Sbjct: 136 LSVRIFGLPEADGIE-LSHHLGRALQLTNILRDIDEDAGIGRLYLPSELLHKVGITATDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
                   +        E  L +   A + M       V    I      S+L+     G
Sbjct: 195 RVVAADSALPSVCAPLVERALAHFAAADKVMNRNPRRVVKAPRIMGKYYYSILQLLIARG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +  +   +L  +I
Sbjct: 255 FAAPRAPVKLGKASKIAILLQYAI 278


>gi|170744392|ref|YP_001773047.1| squalene synthase HpnD [Methylobacterium sp. 4-46]
 gi|168198666|gb|ACA20613.1| squalene synthase HpnD [Methylobacterium sp. 4-46]
          Length = 284

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 87/262 (33%), Gaps = 7/262 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  L P   R ++  +Y F   +  V D       R   L  W+   ++   G   
Sbjct: 25  SFYAAMRLLPAAQRDAMYAVYAFCRAVDDVADDGGPREQRAAELDRWRADIDALYAGRPV 84

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYAFRISSRLIH 152
                    L   V Q+ L  + F  +I+    D+  D +  D    + Y  R++S +  
Sbjct: 85  ART----AALAGPVGQFGLRREDFQAVIDGMAMDAEADIVAPDEAVLDLYCDRVASAVGR 140

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +     RG+LY P + L A+GL R + 
Sbjct: 141 LSVRIFGLAEGPG-RDLAHHLGRALQLTNILRDVDEDAERGRLYLPRERLAAIGLPRPTP 199

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            +     R+    +  A     +   +   +            I  +    +L   +  G
Sbjct: 200 EAALRHPRLGEVCEALAAEAEAHYRASWRIIAASPRRATKAPRIMAAAYHLILDGLRARG 259

Query: 272 FKIVSHSHTPNQLVRPWYMLSS 293
           +        P +L     +L  
Sbjct: 260 WAAPRPRVKPGKLALVGVLLRH 281


>gi|296114184|ref|ZP_06832839.1| putative phytoene synthase [Gluconacetobacter hansenii ATCC 23769]
 gi|295979260|gb|EFG85983.1| putative phytoene synthase [Gluconacetobacter hansenii ATCC 23769]
          Length = 298

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 98/279 (35%), Gaps = 7/279 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D + V   +            + PP  R  +  +Y F   +  V D       +  RL 
Sbjct: 24  TDLMQVEAVVTASGTSFGKGMQILPPDRRYGMYAVYAFCRLVDDVADDEGEARDKCDRLD 83

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCK 137
            W+            ++       LLS +R + L  + F  +I+    D+    +  D  
Sbjct: 84  AWRARIARLYA---GQADDALDRVLLSTIRMFGLRQEDFNAVIDGMEMDARGPIVAPDEA 140

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
            F+ Y  R++S +  L+  +       A      + G A  I  ++  +      G+LY 
Sbjct: 141 TFDLYCDRVASAVGRLSVRVFGDASAEADKVAY-HLGRALQITNILRDVAEDARIGRLYL 199

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIP 256
           P ++L    +   +     ++  +    +I A     +   A   MR        PA + 
Sbjct: 200 PAELLSRFDV-PLTPQGACHAAGLDAVGRILAGRARDHFRAADAAMRRCNRRAMRPARVM 258

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +   ++L   + HG++ +SH  + ++  +      + +
Sbjct: 259 GATYAAILSAQERHGWRDLSHRVSLSRPRKLLIAARALV 297


>gi|84657454|gb|ABC60055.1| phytoene synthase [Solanum lycopersicum]
          Length = 491

 Score =  145 bits (365), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
            + +L +I+R      + F DMIE    D       +  +   Y + ++  +  ++  I+
Sbjct: 277 IANQLTNILRDVGE--EPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPIM 334

Query: 159 DSER-----YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
                      +        GIA  +  ++  +     RG++Y P D L   GL  E   
Sbjct: 335 GIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIF 394

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGF 272
           +G+ +D+  + +K       K+  +A + +  +      P +  + +   +L   + + +
Sbjct: 395 AGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSASRFPVWASLVLYRKILDEIEANDY 454

Query: 273 KIVSHSHTPNQLVRPWYMLSSSIK 296
              +     ++  +   +  +  K
Sbjct: 455 NNFTKRAYVSKSKKLIALPIAYAK 478



 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 67/285 (23%), Gaps = 37/285 (12%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           + S           +      L  +L  P  R ++  +Y +      + D          
Sbjct: 116 LLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPA 175

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W++  E                 L   V  + +    F DMIE    D       +
Sbjct: 176 ALDRWENRLEDVFN---GRPFDMLDGALSDTVSNFPVDILPFRDMIEGMRMDLRKSRYKN 232

Query: 136 CKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
             +   Y + ++  +  ++  I+           +        GIA  +  ++  +    
Sbjct: 233 FDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEEP 292

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL--- 247
            R  +      L          L                     Y       +  +    
Sbjct: 293 FRDMIEGMRMDLRKSRYKNFDEL-----------------YLYCYYVAGTVGLMSVPIMG 335

Query: 248 --PDVFP-------AFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             P+          A + + I   +    ++ G           Q
Sbjct: 336 IAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQ 380


>gi|206603785|gb|EDZ40265.1| Putative phytoene synthase [Leptospirillum sp. Group II '5-way CG']
          Length = 317

 Score =  145 bits (365), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 83/278 (29%), Gaps = 7/278 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                    +   R    +  +A +L P   R +++ +Y F        D   + +    
Sbjct: 3   TLEESYRQCMVLTRSHYENFPVASVLLPAQTRPAIAVIYAFARCADDFGDEEPDTVRSLE 62

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+D+       +           L  ++ ++++P Q+  ++I A   D        
Sbjct: 63  LLAGWRDLLH---ASVKGPVDHFVFRALRDVIERFEIPVQWLDNLIMAFERDRTIVRHPT 119

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 Y+   ++ +  L   I         L +      A  +      + +   +G++
Sbjct: 120 FSDLMTYSRLSANPVGRLLLWIHGYRD-EELLTMSDAICSALQLANFWQDIGLDREKGRI 178

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAF 254
           Y PL  L   GLD  S   G    R     K      +      RE    +         
Sbjct: 179 YVPLSELSDCGLDESSLYEG-LDARHEKLKKHLRSYTMGLFMAGRELPSRLSGRLSLEIA 237

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           + ++    +L+     G  ++       +      ++ 
Sbjct: 238 LVLAGGVRILEAGTRPGRSLLH-RPVLRKTDWALDIVR 274


>gi|167581558|ref|ZP_02374432.1| phytoene synthase, putative [Burkholderia thailandensis TXDOH]
          Length = 278

 Score =  145 bits (365), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 82/277 (29%), Gaps = 4/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSSYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALAA---GNPSHPVSHALAAHHPDIAREADALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  +       L          +   R  +  G A  + Q +  L     +G++Y P+D 
Sbjct: 122 YVDQTGGTFALLVARANAGRPAADDARWAQSLGHALTLAQFVQDLGQDARQGRIYVPIDE 181

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L   G+     L+ + S   +  ++         L  +   +               ++ 
Sbjct: 182 LQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALSASLSGIPADERRTQRTLRALGALA 241

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 278


>gi|309378719|emb|CBX22669.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 270

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 79/269 (29%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGCMPSEVRLAGLEGLRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVAPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +   +  +  +        A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALY-GKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQDDLAKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EAQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + +       ++      +  +  K
Sbjct: 242 DACRYDVFGQRPVLDKKDWLIMLKRALWK 270


>gi|171320814|ref|ZP_02909819.1| squalene synthase HpnD [Burkholderia ambifaria MEX-5]
 gi|171093936|gb|EDT39052.1| squalene synthase HpnD [Burkholderia ambifaria MEX-5]
          Length = 301

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 81/277 (29%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 29  DYCQQKAAPAGSSVYYALRQAPRAAEPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 88

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 89  KELAALAA---GDPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQR 145

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      +   +         G A  + Q + +L      G++Y P+D 
Sbjct: 146 YIAQVGGTFASLVARAS-AANPADPQPWAADVGRALMLAQFVQELGNDARHGRIYLPIDE 204

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 205 LQRYNVTAADLLNRRYSPAFTELLQFQTARAREALAAAEAAIPASERRTQRTLRAQIALA 264

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 265 GALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 301


>gi|254179409|ref|ZP_04886008.1| putative phytoene synthase [Burkholderia pseudomallei 1655]
 gi|184209949|gb|EDU06992.1| putative phytoene synthase [Burkholderia pseudomallei 1655]
          Length = 278

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 84/277 (30%), Gaps = 4/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +      +    P S  L +              ++  +  D       D      
Sbjct: 65  KELAALA---SSHPSHPVSQALAAHHPDIARETDALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           YA +       L          +   R  +  G A  + Q +  L     +G++Y P+D 
Sbjct: 122 YADQTGGMFAALVASASAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVPIDE 181

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+     L+ + S   +  ++         L  +   +               ++ 
Sbjct: 182 LQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALGALA 241

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 278


>gi|167570292|ref|ZP_02363166.1| phytoene synthase, putative [Burkholderia oklahomensis C6786]
          Length = 278

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 83/277 (29%), Gaps = 4/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSIYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTIGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALAA---GNPSHPVSQALAAHHPDIAREADALQTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y          L      S   +   R  +  G A  + Q +  L     +G++Y P+D 
Sbjct: 122 YVDHTGGTFAELVARASASRPAADGARWAQPLGHALTLAQFVQDLGQDARQGRIYIPIDE 181

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L   G+     L+ + S   +  ++  A      L  +   +               ++ 
Sbjct: 182 LQRYGVTAADLLNRRYSSAYTELMRFQASRARDALNTSLSGIPADERRAQRTLRALGALA 241

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LAVLDEIERDGFQVLHQRLALTPIRKLWIAWRAARRR 278


>gi|296448366|ref|ZP_06890254.1| squalene synthase HpnD [Methylosinus trichosporium OB3b]
 gi|296254127|gb|EFH01266.1| squalene synthase HpnD [Methylosinus trichosporium OB3b]
          Length = 291

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 96/274 (35%), Gaps = 15/274 (5%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  +  P  R ++  +Y F   +  + D A +   R   L  W+   +        
Sbjct: 22  SFYLAMRVLEPERRDAMYAIYGFCRAVDDIADEAGDRDARLSALDDWRRDLDELYA---- 77

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                   +L + VR++ L    F  +I+    D   D    D ++ + Y  R++S +  
Sbjct: 78  GRTHKRCADLAAPVRRFALDRADFEAVIDGMAMDVVEDIRAPDWERLDLYCDRVASAVGR 137

Query: 153 LATMILDSERYSAS---------LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           L+  +      +             +  + G A  +  ++  L     RG+LY P + L 
Sbjct: 138 LSVRVFGLADEADCGGGALPTKARLLAFHMGRALQLTNILRDLDEDDRRGRLYLPREALE 197

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITES 262
           A G+   S  +      ++ A    AE   K+  +A   MR          ++  +   S
Sbjct: 198 AAGVPDLSPGAALAHPGVADACAAVAERARKHYGEAELIMRVSPQRAVKAPYLMATAYRS 257

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +L      GF       + ++      ++  ++ 
Sbjct: 258 ILDRLVARGFAPPRAPVSASRAKVLLALVKYALT 291


>gi|146284184|ref|YP_001174337.1| phytoene synthase [Pseudomonas stutzeri A1501]
 gi|145572389|gb|ABP81495.1| phytoene synthase [Pseudomonas stutzeri A1501]
          Length = 308

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 90/283 (31%), Gaps = 12/283 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARN 69
            +      + +         A  L     R S   LY +      V D           +
Sbjct: 3   DQVIDHSTQAINVGSKSFAAAAKLFDERTRQSAVMLYAWCRHCDDVIDGQTLGHGQVEGD 62

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
             + + RL    D+ E +  G     + P    L  +++++ +P  + L+ +     D  
Sbjct: 63  RNSGEARLAELVDLTERAYAGEPM--VDPAFAALQQVIQRHRIPKAHPLEHLAGFRMDVR 120

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                       Y +R++  +  +   ++ +E      R     G+A  +  +   +   
Sbjct: 121 GYRYQTLDDTLLYCYRVAGVVGLMMARVMGAEAEPTLDRACD-LGLAFQLTNIARDIVED 179

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-P 248
              G++Y P + L  VG+  +     Q+   ++       +L   Y   A + +R +   
Sbjct: 180 AQIGRVYLPAEWLAEVGIPEDEVALPQHRAALATLAARLVDLAEPYYRSASQGLRDLPLR 239

Query: 249 DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             +       +   +    +  G        + ++  +  ++L
Sbjct: 240 SAWSIATAHGVYRQIGVEVKARGAAAWDARVSTSKGQKLQFLL 282


>gi|302661977|ref|XP_003022649.1| hypothetical protein TRV_03236 [Trichophyton verrucosum HKI 0517]
 gi|291186606|gb|EFE42031.1| hypothetical protein TRV_03236 [Trichophyton verrucosum HKI 0517]
          Length = 595

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 99/316 (31%), Gaps = 27/316 (8%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F T++ R  +    R+    +  L+      YL   +     R+ L  LY F  +   + 
Sbjct: 278 FFTRSRRYCDTNVLREMSQAVTLLKQKSQTMYLGSAMFEGQLRLDLVALYSFCRKADDLI 337

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESIS------------PFSVELLSIVRQYDL 112
           D A N  T    ++  +   E   K   A   +            P     + ++    L
Sbjct: 338 DDAPNRATAQYWIKQCEKALELRFKLKGAALDNTAAYQQLTKSIPPQLHAAVHLLPASRL 397

Query: 113 PNQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
           P     D+++    D   D       I      E YA+ ++  +  L   ++      + 
Sbjct: 398 PKGPLSDLLKGFEIDMKFDSERGIFPIATEHDLEVYAYHVAGTIATLLLELVFRHHPVSI 457

Query: 167 LRVIKY--------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNS 218
               +          G A     +   +      G++Y P   L   GL     ++   +
Sbjct: 458 SDSERLRVISAGEGMGRALQYTNIARDIVRDAEIGRVYIPSVWLAEQGLTPSMVVNQPRN 517

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSH 277
            ++    +   +   K     +E +  +  +V  P    V++   + +  + +  K+ + 
Sbjct: 518 PKLIPLRRRLLDKAEKCYRDTQEAISELPANVRAPVRATVTVYMDIGQVIRENEMKVWNG 577

Query: 278 SHTPNQLVRPWYMLSS 293
               ++  R      +
Sbjct: 578 KLKVSRWRRFKGAWLA 593


>gi|163756278|ref|ZP_02163393.1| ribonuclease Z [Kordia algicida OT-1]
 gi|161323890|gb|EDP95224.1| ribonuclease Z [Kordia algicida OT-1]
          Length = 279

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 84/289 (29%), Gaps = 25/289 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S      + +       LA  +  P  R  +  +Y F      + D+  +   
Sbjct: 2   KALFDSVSYKCSTVVTKSYSTSFALATKMLSPSIRQDIYNIYGFVRFADEIVDSFHDFD- 60

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           ++  L  ++   + +    I  S++P        V +Y++P       +++   D     
Sbjct: 61  KEYLLDKFQADLDCAMANKI--SLNPILNAFQYTVHKYEIPKHLIDAFMKSMRQDLDKKV 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
               +++  Y +  +  +  +   +    D E+Y          G A      +  L   
Sbjct: 119 YLTQEEYNEYIYGSADVVGLMCLKVFVKGDVEKYEELKSSAMSLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L  +                  + +              E +  +  
Sbjct: 179 FEDLDRTYFPDADLKNLD---------------EASKQKIIAEIEHDFKLGLEGISKLPI 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSI 295
           +  F  F        +LK  +     KI +         +   +  S +
Sbjct: 224 EAKFGVFTAYKYYFKLLKKLKRTPSVKIKNARIRIPNYQKMALLAKSYV 272


>gi|126661887|ref|ZP_01732886.1| phytoene synthase [Flavobacteria bacterium BAL38]
 gi|126625266|gb|EAZ95955.1| phytoene synthase [Flavobacteria bacterium BAL38]
          Length = 279

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 89/292 (30%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFV-LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F + S    ++  +        A  +  P  R  +  +Y F      + D+  +   
Sbjct: 2   KALFDKVSNDCSVKVTKAYSTSFSSAVKMLAPSIRQDIYNIYGFVRFADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +  ++ +D+ ++    +   S++P        V +Y++P +     +++   D     
Sbjct: 62  AFLFSKFEQDLTDALEHKI---SLNPILNSFQYTVNKYNIPLEMIDAFMKSMKLDLSKSE 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
               ++++ Y +  +  +  +   +  +        +       G A      +  L   
Sbjct: 119 YKTTEEYQEYIYGSADVVGLMCLKVFVNGNEEKYNELKDSAMRLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L  +    +                            A E ++ +  
Sbjct: 179 FEDLSRTYFPNTDLNHLDEKSKQ---------------EIIADIESDFEAAFEGIKNLPL 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  +      + +L   Q     +I +     +   +   +    +K R
Sbjct: 224 EAKFGVYTAYRYYKKLLIKLQKTPSLEIKNTRIRVSDYQKVQLLARCYVKYR 275


>gi|189350734|ref|YP_001946362.1| phytoene synthase [Burkholderia multivorans ATCC 17616]
 gi|189334756|dbj|BAG43826.1| phytoene synthase [Burkholderia multivorans ATCC 17616]
          Length = 303

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 80/277 (28%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 31  DYCQQKAAPAGSSVYYALRQAPAAVEPRLTALFALRRELEETVKEISDPTVGHTKLAWWH 90

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 91  KELAALAN---GQPSHPVTQALARHHPSIAAEADALRTLVNGYGMDLEQARYLDFANLQR 147

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++             + +           G A  + Q + +L      G++Y P+D 
Sbjct: 148 YVAQVGGT-FAALVARAAAAQPGDPQPWAADVGRALMLAQFVQELGNDARHGRIYLPIDE 206

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 207 LQRYNVTAADLLNRRYSPAFTELMQFQTARAREALDAADAAIPAAERRAQRTLRAQIALA 266

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 267 RALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 303


>gi|192292629|ref|YP_001993234.1| squalene synthase HpnD [Rhodopseudomonas palustris TIE-1]
 gi|192286378|gb|ACF02759.1| squalene synthase HpnD [Rhodopseudomonas palustris TIE-1]
          Length = 279

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 88/264 (33%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A  + P   R ++  +Y F   +  + D+ R    R   LQ W+D   +  +G   
Sbjct: 20  SFYAAMRILPRPQREAMFQVYSFCRFVDDIADSDRPREQRVAELQQWRDDIAALYRGAPP 79

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
               P   +    +R + L  + F  +I+    D   D    D    + Y  R++S +  
Sbjct: 80  ----PRLADYQESLRTFGLKREDFEAIIDGMEMDVDADIRAPDEATLDLYCDRVASAVGR 135

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +      G+LY P ++L  VG+     
Sbjct: 136 LSVRIFGLPEADGIE-LSHHLGRALQLTNILRDIDEDTGIGRLYLPSELLHKVGITATDP 194

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
                   +        E  L +   A + M       V    I      S+L+     G
Sbjct: 195 RVVAADSALPSVCAPLVERALAHFAAADKVMNRNPRRVVKAPRIMGKYYYSILQLLIARG 254

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +  +   +L  +I
Sbjct: 255 FAAPRAPVKLGKASKIAILLQYAI 278


>gi|312199713|ref|YP_004019774.1| squalene synthase HpnD [Frankia sp. EuI1c]
 gi|311231049|gb|ADP83904.1| squalene synthase HpnD [Frankia sp. EuI1c]
          Length = 309

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 87/285 (30%), Gaps = 11/285 (3%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             +          +    +      L P   R +LS +Y F   L  + D       +  
Sbjct: 9   TVTEAYAACEEITKQAAKNFSYGIRLLPADRRAALSAVYAFSRRLDDIGDGDLPDDQKVE 68

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L   +       +GL   S  P  V L    +++ +P + F+++ +    D    +   
Sbjct: 69  GLAKARADI----RGLDPNSSDPVLVALADAAKRFPIPLEAFIELADGVESDIVPSTYDT 124

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYHR 192
                 Y   ++  +  L+  I  +   ++      +    G+A     ++  +      
Sbjct: 125 FDDMVGYCRLVAGTIGRLSLGIFGTTEAASRRDAPAIADALGVALQQTNILRDVREDLLG 184

Query: 193 GQLYFPLDILGAVGLD---RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           G+ Y P   L A G+        + G   D +   +++      ++  +    +  +   
Sbjct: 185 GRTYLPQAELAAAGVKLAVDADGVLGGPRDALVDYLRMGTARAEEWYSRGLVLLDLLDRR 244

Query: 250 VFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                  ++ I   + +  Q     +++   +     +      S
Sbjct: 245 SAACCGALAGIYLRLNRRIQAEPAAVLTQRVSLPAREKALVAARS 289


>gi|112702902|emb|CAL34122.1| phytoene synthase CRTB [Cronobacter sakazakii]
          Length = 323

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 73/285 (25%), Gaps = 12/285 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
                  +         A  L     R S   LY +      V D              T
Sbjct: 7   LTHATETIEAGSKSFATASKLFDAKTRRSALMLYAWCRHCDDVTDGQALGFRAADAPTDT 66

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              R+   + +   +  G       P       +   + +P    LD +E    D   + 
Sbjct: 67  PQARIALLRALTLEAYAGKPMRE--PNFAAFQEVALAHQIPPALALDHLEGFAMDVREER 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                    Y + ++  +  +   ++      A L      G+A  +  +   +      
Sbjct: 125 YHTFDDTLRYCYHVAGVVGLMMARVMGVRD-EAVLDRACDLGLAFQLTNIARDIVEDAAI 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P   L   GL  ++     +   ++       +    Y   AR  +  +      
Sbjct: 184 GRCYLPEAWLQEEGLCADTLTDRAHRPALARLAARLVDEAEPYYASARAGLAGLPLRSAW 243

Query: 253 AFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           A      +   +    +  G          ++  +   +   ++ 
Sbjct: 244 AIATAHGVYREIGVKVKRAGVNAWETRQGTSKAEKLALLAKGAVM 288


>gi|1842243|gb|AAC44849.1| phytoene synthase [Flavobacterium sp. ATCC 21588]
          Length = 303

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 87/275 (31%), Gaps = 13/275 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQ 78
              +         A  L PP  R     LY +      V D                RL 
Sbjct: 9   EAAIAQGSQSFAQAAKLMPPGIREDTVMLYAWCRHADDVIDGQVMGSAPEAGGDPQARLG 68

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
             +   ++         +SP    L  + R++D P+ + +D+IE    D  +        
Sbjct: 69  ALRA--DTLAALHEDGPMSPPFAALRQVARRHDFPDLWPMDLIEGFAMDVADREYRSLDD 126

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y++ ++  +  +   ++  +   A L      G+A  +  +   +      G+ Y P
Sbjct: 127 VLEYSYHVAGVVGVMMARVMGVQD-DAVLDRACDLGLAFQLTNIARDVIDDAAIGRCYLP 185

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPV 257
            D L   G   E       SD +   I    +    Y   AR+ + ++ P   +     +
Sbjct: 186 ADWLAEAGATVE---GPVPSDALYSVIIRLLDAAEPYYASARQGLPHLPPRCAWSIAAAL 242

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            I  ++    +  G +      + ++  +   +  
Sbjct: 243 RIYRAIGTRIRQGGPEAYRQRISTSKAAKIGLLAR 277


>gi|329908478|ref|ZP_08274868.1| Phytoene synthase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546705|gb|EGF31656.1| Phytoene synthase [Oxalobacteraceae bacterium IMCC9480]
          Length = 269

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 77/269 (28%), Gaps = 5/269 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESST 88
           D   +  +A +L P   R ++  +Y F      + D     P  R   L  ++   +   
Sbjct: 4   DHYENFPVASILLPARLRPAVEAIYAFARSADDIADEGDARPDQRIAALDAYEAQLDLIA 63

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                        +L  +V+ + LP     D++ A   D       D      Y  R ++
Sbjct: 64  A--GGVPTEALFRKLHGVVQAWRLPLTPLRDLLSAFRQDVVTTRYADFTTLLDYCRRSAN 121

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +  +     +L        A  +      + I + + ++Y P++ L   G+D
Sbjct: 122 PVGALMLHLYGAADVR-NLAQSDAICSALQLINFWQDVAIDWQKSRIYLPMEDLARFGVD 180

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
                  +  D     +    E     L         +   +      V      +L   
Sbjct: 181 ETHLNEQRVDDAWRQLMAFEVERARALLLAGAPLALRLPGRIGWELRLVVQGGLHILAAI 240

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +   + +        +      +  +   
Sbjct: 241 EAADYDVFRQRPKLRKADYLRLLWRALRM 269


>gi|124515093|gb|EAY56604.1| putative phytoene synthase [Leptospirillum rubarum]
          Length = 317

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 84/278 (30%), Gaps = 7/278 (2%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
                    +   R    +  +A +L P   R +++ +Y F        D   + +    
Sbjct: 3   TLEESYRQCMVLTRSHYENFPVASVLLPAKTRPAIAVIYAFARCADDFGDEEPDTVRSLE 62

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
            L  W+D+       +           L  ++ ++++P  +  ++I A   D        
Sbjct: 63  LLSGWRDLL---YASVKGPVDHFVFRALRDVIERFEIPVHWLDNLIMAFERDRTIVRHPT 119

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 Y+   ++ +  L   I         L +      A  +      + I   +G++
Sbjct: 120 FSDLMTYSRLSANPVGRLLLWIHGYRD-EGRLAMSDAICSALQLANFWQDIGIDREKGRI 178

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAF 254
           Y PL  L A GLD  S   G   +R     +      +      R+    +         
Sbjct: 179 YVPLSELSACGLDETSLYEG-LDERHEALKRRLRAYTMGLFMAGRDLPAKLSGRLSLEIA 237

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           + ++    +L+     G  ++       +      ++ 
Sbjct: 238 LVLAGGVRILEAGTRPGRSLLD-RPVLRKTDWALDLVR 274


>gi|290955131|ref|YP_003486313.1| phytoene synthase [Streptomyces scabiei 87.22]
 gi|260644657|emb|CBG67742.1| putative phytoene synthase [Streptomyces scabiei 87.22]
          Length = 304

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 87/241 (36%), Gaps = 11/241 (4%)

Query: 45  LYRISLSFLYYFHTELMRVRDTARNPITRDMR---LQWWKDIFESSTKGLIAESISPFSV 101
             R ++  LY F      + D+    +    R   L    +  E   +    +S  P  +
Sbjct: 2   ERRPAVHALYGFARWADDIVDSLDTDLPPHRRAADLGLLHERLEQGLRD--GDSPEPVVL 59

Query: 102 ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH-LATMILDS 160
            L    R+Y + +++F D + +   D              Y    ++ +   +  ++   
Sbjct: 60  ALADTARRYAIDHRHFRDFMASMRSDLEVTDYPTYDALRAYTHGSAAVIGLQMLPILGTV 119

Query: 161 ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF----LSGQ 216
                +       G+A  +   +  +     RG++Y P D+L A G+DRE       +G+
Sbjct: 120 VPREEAAPHAAALGLAFQLTNFLRDVGEDLDRGRVYLPADLLAAHGVDRELLSWSRRTGR 179

Query: 217 NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIV 275
              RI+ A++ F +L      +A   +  + P   P       +   +L    + G+ ++
Sbjct: 180 RDPRITRALRAFDDLTRGVYREAAPGLPMLDPVSRPCIRTAFVLYGGILDAVADDGYAVL 239

Query: 276 S 276
            
Sbjct: 240 H 240


>gi|144897584|emb|CAM74448.1| Phytoene/squalene synthetase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 278

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 10/281 (3%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D   +  +LR  D+DRY   + + P  R  L  LY F+ EL ++R   R P+   +RLQ
Sbjct: 6   TDLSALGESLRRHDHDRYATAMFADPARRGDLWALYAFNLELSQIRTQVREPLAGMIRLQ 65

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW+D+ E + +        P    LL ++ +  L      D+++    D           
Sbjct: 66  WWRDVVEGARREEAM--RHPVGGPLLDLIERRQLQLTDVHDLVDVRQHDLDPAPFATIAD 123

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
           ++ Y  R S  L  LA  +L +E  +A     + AG A  +  L+  LP H  +G    P
Sbjct: 124 WQEYGRRSSGGLARLAATVLGAEDCAA----AQSAGTAWALTGLLRSLPFHLAQGWCSLP 179

Query: 199 LDILGAVGLDRESFLSGQNSD-RISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
            D+L   G+  +  LS       ++ ++    +L   +L ++R     +   V PA +P 
Sbjct: 180 ADVLAGQGVSSDEVLSATVDKTALAASVLTLTDLVEPHLRQSRRL--RVPRAVLPALLPA 237

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +  + L+  ++ G  +        +   P  +  ++++ R
Sbjct: 238 VLAGAHLRRIRSLGGDVFDSRSYRPRP-MPVRLAWAALRGR 277


>gi|120436837|ref|YP_862523.1| phytoene synthase [Gramella forsetii KT0803]
 gi|117578987|emb|CAL67456.1| phytoene synthase [Gramella forsetii KT0803]
          Length = 279

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 87/292 (29%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNLR-DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + IF   S    + +         LA  +  P  R  +  +Y F      + D+  +   
Sbjct: 2   KTIFDIVSRECSKTVTNSYSTSFSLATKMLAPSIRQDIYNIYGFVRFADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +   +  D++++    +   S++P        V +Y +  + +   +++   D +   
Sbjct: 62  ERLFADFENDLYKAIDSKI---SLNPILNSFQETVHKYSIQEELYSSFMDSMRLDLHKSE 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
               ++++ Y +  +  +  +   +           + +     G A      +  L   
Sbjct: 119 YLSMEEYKQYIYGSADVVGLMCLKVFVHGDDKRYEELKESAMSLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           Y    + YFP   L  +    +                   +       K  + + ++  
Sbjct: 179 YEDLSRSYFPNVDLSQLNEINKE---------------QIIKEIEDDFHKGLKGIAHLPV 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  +        +L+  +     +I +         +   +  S I  R
Sbjct: 224 EAKFGVYTAYIYYRKLLQKLKRIPSLEIRNRRVRVPNYQKAGLLAKSYISYR 275


>gi|30349414|gb|AAP22038.1| phytoene synthase 2 [Zea mays]
          Length = 221

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 71/210 (33%), Gaps = 6/210 (2%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
                 +   L   V ++ +  Q F DM++    D +        +   Y + ++  +  
Sbjct: 7   GRPYDMYDAALSDTVSKFPVDIQPFKDMVQGMRLDLWKSRYMTFDELYLYCYYVAGTVGL 66

Query: 153 LATMILDSERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           +   ++           +        GIA  +  ++  +     RG++Y PLD L   GL
Sbjct: 67  MTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPLDELAQAGL 126

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKH 266
             E    G+ + +    +K   +    +  +A + + ++      P    + +   +L  
Sbjct: 127 TEEDIFRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDA 186

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            + + +   +      +  +   +  +  +
Sbjct: 187 IEANDYNNFTKRAYVGKAKKLLSLPLAYAR 216


>gi|255639592|gb|ACU20090.1| unknown [Glycine max]
          Length = 219

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 71/201 (35%), Gaps = 6/201 (2%)

Query: 100 SVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILD 159
              L   V +Y +  Q F DMIE    D       +  +   Y + ++  +  ++  ++ 
Sbjct: 3   DAALSHTVSKYPVDIQPFKDMIEGMRVDLRKSRYNNFDELYLYCYYVAGTVGLMSVPVMG 62

Query: 160 SERY-----SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS 214
                     +        GIA  +  ++  +     RG++Y P D L   GL  +    
Sbjct: 63  IAPESNASSESIYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFR 122

Query: 215 GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFK 273
           G+ +D+    +K   +    +  +A   +  +      P +  + +   +L   + + + 
Sbjct: 123 GRVTDKWRKFMKGQIKRARMFFDEAERGVAELNSASRWPVWASLLLYRQILDSIEANDYN 182

Query: 274 IVSHSHTPNQLVRPWYMLSSS 294
             +      ++ +   + ++ 
Sbjct: 183 NFTKRAYVGKVKKLLSLPTAY 203


>gi|83719937|ref|YP_442622.1| phytoene synthase [Burkholderia thailandensis E264]
 gi|167619672|ref|ZP_02388303.1| phytoene synthase, putative [Burkholderia thailandensis Bt4]
 gi|257138835|ref|ZP_05587097.1| phytoene synthase, putative [Burkholderia thailandensis E264]
 gi|83653762|gb|ABC37825.1| phytoene synthase, putative [Burkholderia thailandensis E264]
          Length = 278

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 82/277 (29%), Gaps = 4/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSSYYALRQAPLARQPLVAALFALRRELEQTAKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALAA---GNPSHPVSHALAAHHPDIAREADALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  +       L          +   R  +  G A  + Q +  L     +G++Y P+D 
Sbjct: 122 YVDQTGGTFALLVARANAGRPAADDARWAQSLGHALTLAQFVQDLGQDARQGRIYVPIDE 181

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           L   G+     L+ + S   +  ++         L  +   +               ++ 
Sbjct: 182 LQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALSASLSGIPADERRTQRTLRALGALA 241

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 278


>gi|206560370|ref|YP_002231134.1| squalene/phytoene synthase family protein [Burkholderia cenocepacia
           J2315]
 gi|198036411|emb|CAR52307.1| squalene/phytoene synthase family protein [Burkholderia cenocepacia
           J2315]
          Length = 300

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 81/277 (29%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    EL        +P     +L WW 
Sbjct: 28  DYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 87

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 88  KELAALAD---GQPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQR 144

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      ++         +  G A  + Q + +L      G++Y P+D 
Sbjct: 145 YIAQVGGTFASLVARASSADPTD-PQPWAEDVGRALMLAQFVQELGNDARHGRIYLPIDE 203

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++         L  A   +              +++ 
Sbjct: 204 LQRYNVTAADLLNRRYSPAFTELLQFQTTRARDALAAAGAAIPAAERRAQRTLRAQIALA 263

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L      G++++        + + W    ++ ++
Sbjct: 264 GALLDEIARDGYQVLHQRIALTPIRKLWIAWRAARRR 300


>gi|86133572|ref|ZP_01052154.1| phytoene synthase [Polaribacter sp. MED152]
 gi|85820435|gb|EAQ41582.1| phytoene synthase [Polaribacter sp. MED152]
          Length = 280

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 93/292 (31%), Gaps = 24/292 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           +++F   S    + + +       LA  +  P  R  +  +Y F      + DT  +   
Sbjct: 2   KELFDSVSNDCSKLVTKSYSTSFSLAVNMLSPKIRADIYNIYGFVRFADEIVDTFHDYNK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            ++   + +D + S  +     S++P        V +Y++P +     +++   D +   
Sbjct: 62  EELMAHFERDYYMSKEQ---GISLNPILNSFQQTVNRYNIPEEMVQAFLKSMKADLHKTQ 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY---AGIAQFIGQLICQLPIH 189
                +++ Y +  +  +  +   +           +       G A      +  L   
Sbjct: 119 YETKAEYDEYIYGSADVVGLMCLKVFVDGDEKRYNELKDAAMRLGSAFQKVNFLRDLKDD 178

Query: 190 YH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   LG +    +  +  +             +    +       +  +  
Sbjct: 179 FELLNRSYFPNVDLGQLNAISKQLIIDEIEADF--------DYAYTH------GILKLPV 224

Query: 249 DV-FPAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  ++       +LK  +    + I+      +  ++   +  S +K +
Sbjct: 225 EAKFGVYMAYRYYRRLLKKLKAVPSEKIMDTRIRISDPMKINLLARSYVKYK 276


>gi|85700407|sp|P54975|CRTB_PARSN RecName: Full=Phytoene synthase
 gi|61629282|dbj|BAA09595.2| Phytoene synthase [Paracoccus sp. N81106]
 gi|78483935|dbj|BAE47469.1| phytoene synthase [Paracoccus sp. N81106]
          Length = 304

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 81/277 (29%), Gaps = 13/277 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQW 79
             +         A  L PP  R     LY +      V D                RL  
Sbjct: 10  EAITQGSQSFATAAKLMPPGIRDDTVMLYAWCRHADDVIDGQALGSRPEAVNDPQARLDG 69

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
            +   ++         ++P    L ++ R++D P  + +D+IE    D            
Sbjct: 70  LRA--DTLAALQGDGPVTPPFAALRAVARRHDFPQAWPMDLIEGFAMDVEARDYRTLDDV 127

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y++ ++  +  +   ++         R     G+A  +  +   +      G+ Y P 
Sbjct: 128 LEYSYHVAGIVGVMMARVMGVRDDPVLDRACD-LGLAFQLTNIARDVIDDARIGRCYLPG 186

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVS 258
           D L   G   +       S  +   I    +    Y   AR  +  + P   +     + 
Sbjct: 187 DWLDQAGARVD---GPVPSPELYTVILRLLDAAELYYASARVGLADLPPRCAWSIAAALR 243

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           I  ++    +  G +      + ++  +   +     
Sbjct: 244 IYRAIGLRIRKGGPEAYRQRISTSKAAKIGLLGIGGW 280


>gi|254249552|ref|ZP_04942872.1| Squalene/phytoene synthase [Burkholderia cenocepacia PC184]
 gi|124876053|gb|EAY66043.1| Squalene/phytoene synthase [Burkholderia cenocepacia PC184]
          Length = 290

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 31  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLNRWRADIDACFAGRP- 89

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R ++L    F  MI+    D+  D    D    + +  R++S    
Sbjct: 90  -PRH--LVALDREIRAFNLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 146

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 147 LSVRIFGMPEAEGI-TLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 205

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 206 ATIVRDPALPRVCATLVERALEHFRQADAVMDTCPRAQVKAPRIMSGAYRCILEAAIARG 265

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 266 FAAPRAPLRKPKARMLMIAARYAL 289


>gi|217970559|ref|YP_002355793.1| squalene synthase HpnC [Thauera sp. MZ1T]
 gi|217507886|gb|ACK54897.1| squalene synthase HpnC [Thauera sp. MZ1T]
          Length = 282

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 88/273 (32%), Gaps = 10/273 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-MRLQWWKDIFESST 88
           +   +  +A LL P   R  +  +Y F      V D    P      RL  ++   ++  
Sbjct: 4   EHYENFPVASLLLPARLREPVEAIYAFARGADDVADEGDAPAVARLARLHDYQLGLQACA 63

Query: 89  KGLIAESIS--PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
           +G      +  P    L   +  + LP Q F D+++A   D       D  +   Y  R 
Sbjct: 64  QGRPVADATLAPMFARLGRAIHTHALPLQPFRDLLDAFMQDVGKTRYADFAELRDYCRRS 123

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +  +  L   +  +     +LR       A  +      + + + + ++Y PLD L   G
Sbjct: 124 ADPVGRLMLHLYGAADAE-NLRRSDAICTALQLINFWQDVAVDWEKRRIYLPLDDLARFG 182

Query: 207 LDR---ESFLSGQNSDR--ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
           LD    ++   G+ S        +          +       R +   V      V +  
Sbjct: 183 LDEPALDALARGERSPGEDWRALMAFEVRRARTMMLDGAPLARTLRGRVGWELRLVVLGG 242

Query: 262 -SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             +L+  +  G+ +  H     +         +
Sbjct: 243 LRILEGIEAVGYDVFHHRPALGRGDWARLGWRA 275


>gi|196230643|ref|ZP_03129505.1| Squalene/phytoene synthase [Chthoniobacter flavus Ellin428]
 gi|196225573|gb|EDY20081.1| Squalene/phytoene synthase [Chthoniobacter flavus Ellin428]
          Length = 281

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 95/279 (34%), Gaps = 10/279 (3%)

Query: 25  LRNLRDIDYDR-YLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMRLQWWKD 82
            + +         LA +  P   R  ++  Y +   +  + D     +  R   L  WK 
Sbjct: 8   AQAITRASKSNLALAFVSLPRERREDMTVFYAWCRVIDDIADDPGQTVENRRAALDQWKR 67

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             +        +  S  +  + ++V +Y L    F ++I     D    +         Y
Sbjct: 68  AVQQ-----PVDGESTLAAPVRTLVTKYHLDVSLFHELIAGVEMDLDGVTYQTWDDLRLY 122

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG-QLYFPLDI 201
            +R++S +  ++  I       A    ++     Q +  ++  +   +  G ++Y P + 
Sbjct: 123 CYRVASAVGLISIEIFGCRDPLAREYALQLGLALQ-LTNILRDVGEDFANGGRIYLPRED 181

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L           + ++++     ++  A     +   A + +          A I  +I 
Sbjct: 182 LAQFHYTAGDLAARRHNEAFLALMRFEASRARGFYAAAEKALPAGDRRALVAAEIMHAIY 241

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +L+  +   F +  H ++  +L +   +    ++ RF
Sbjct: 242 RRLLERMERDDFHVFGHRYSLGRLRKLSLITREILRARF 280


>gi|89891020|ref|ZP_01202528.1| phytoene synthase [Flavobacteria bacterium BBFL7]
 gi|89516664|gb|EAS19323.1| phytoene synthase [Flavobacteria bacterium BBFL7]
          Length = 279

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 28/292 (9%), Positives = 79/292 (27%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNLRD-IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F + S    + + +       LA  +  P  R  +  +Y F      + D+  +   
Sbjct: 2   KSLFDKVSRQCSKAVTNNYSTSFSLASKMLGPTIRQDIHNIYGFVRFADEIVDSFHDYD- 60

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           +   L   +   +         S++P        V +Y++    +   I +   D     
Sbjct: 61  KRTLLD--RFELDLKYAIEEKISLNPILNSFQETVNKYNITPDMYGAFINSMRLDLDKSV 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY---AGIAQFIGQLICQLPIH 189
               +++++Y +  +  +  ++  +           +       G A      +  L   
Sbjct: 119 YLTDEEYKNYIYGSADVVGLMSLKVFVKGDQEKYNELKDDAMRLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
                + YFP   L    L                      +   +      + ++ +  
Sbjct: 179 LDVLERSYFPNTDLQ--DLSESD-------------KARLIQEIKEDFDAGLKGIQRLPV 223

Query: 249 DVF-PAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +     +        +L   +     +I +         +   +    +  R
Sbjct: 224 EAKLGVYTAYVYYRRLLTRLERTPSKEIRNARIRVPNYEKIGLLAKGYVSYR 275


>gi|86739532|ref|YP_479932.1| squalene/phytoene synthase [Frankia sp. CcI3]
 gi|86566394|gb|ABD10203.1| Squalene/phytoene synthase [Frankia sp. CcI3]
          Length = 357

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 71/263 (26%), Gaps = 7/263 (2%)

Query: 25  LRNLRDIDYDRYLACLL-SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
            + LR    + +       P   R   + LY F   +  + D A         L      
Sbjct: 27  EQLLRAAPAENFPVSPFVLPAAVRFHFNALYAFSRLVDNLGDEAAGDRLAL--LDRLSAD 84

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            E        +   P    L   VR  DLP + F  ++EA+  D              Y 
Sbjct: 85  LEVI--WTGGQPELPVLRLLARTVRDCDLPAEPFQRLVEANRQDQRVTRYETFDDLVRYC 142

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
              +  +  +   +           +      A  + +    +      G++Y PL+ L 
Sbjct: 143 TLSADPIGRMVLGVFGLATPDRV-VLSDRVCTALQLAEHWQDVAEDLAAGRIYLPLEDLD 201

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITES 262
             G+      +   S  +   +          + +    +  +   +  A    V    +
Sbjct: 202 TFGVTEADLRASVASPAVRHLMAFEVARARTVIDQGAPLVSMVPGRLRLALAGFVGGGRA 261

Query: 263 VLKHAQNHGFKIVSHSHTPNQLV 285
            L   +   + ++       +  
Sbjct: 262 ALDAIRRADYDVLGGPPKATKPR 284


>gi|107028887|ref|YP_625982.1| squalene/phytoene synthase [Burkholderia cenocepacia AU 1054]
 gi|116689955|ref|YP_835578.1| squalene/phytoene synthase [Burkholderia cenocepacia HI2424]
 gi|105898051|gb|ABF81009.1| Squalene/phytoene synthase [Burkholderia cenocepacia AU 1054]
 gi|116648044|gb|ABK08685.1| Squalene/phytoene synthase [Burkholderia cenocepacia HI2424]
          Length = 300

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 80/277 (28%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    EL        +P     +L WW 
Sbjct: 28  DYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 87

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 88  KELAALAD---GQPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQR 144

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      S   +         G A  + Q + +L      G++Y P+D 
Sbjct: 145 YIAQVGGTFASLVARAS-SANPADPQPWAADVGRALMLAQFVQELGNDARHGRIYLPIDE 203

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++         L  A   +              +++ 
Sbjct: 204 LQRYNVTAADLLNRRYSPAFTELLQFQTTRARDALAAADAAIPATERRAQRTLRAQIALA 263

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L      G++++        + + W    ++ ++
Sbjct: 264 GALLDEIARDGYQVLHQRIALTPIRKLWIAWRAARRR 300


>gi|110638432|ref|YP_678641.1| phytoene synthase [Cytophaga hutchinsonii ATCC 33406]
 gi|110281113|gb|ABG59299.1| phytoene synthase [Cytophaga hutchinsonii ATCC 33406]
          Length = 278

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 82/293 (27%), Gaps = 26/293 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           +++F   S    +   +       L            +  +Y F      + D+      
Sbjct: 2   KQLFDNVSAMCSKLTTKKYSTSFSLGIHFLHKKLHDPVYAIYGFVRFADEIVDSFHGYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           + +  Q+ +D    +       S++P       +V  Y++  +     +++   D    +
Sbjct: 62  KRLMAQFRRDT---AFALQDKISLNPILNSFQHVVHTYNIEWELIDTFLKSMEMDLDQSA 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
             + + ++ Y    +  +  +   +    D + Y          G A      +      
Sbjct: 119 H-NEQSYKEYIIGSAEVVGLMCLRVFVKGDVDMYEKQKPHAMSLGAAFQKVNFLRDAKED 177

Query: 190 Y-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +   G+ YFP   +                       +       K    A   ++ +  
Sbjct: 178 FDSLGRTYFPDVSMEKFD---------------RHIKQNIESDIEKDFQHALIGIKQLPA 222

Query: 249 DVF-PAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +     ++     +++    ++    +++        L +   +     + +F
Sbjct: 223 ESRLGVYLAYIYYKNLFHKIKSIPPERMLKERIRIPNLNKFALLFQCYFRNQF 275


>gi|149278107|ref|ZP_01884246.1| phytoene synthase [Pedobacter sp. BAL39]
 gi|149231305|gb|EDM36685.1| phytoene synthase [Pedobacter sp. BAL39]
          Length = 278

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 31/284 (10%), Positives = 78/284 (27%), Gaps = 26/284 (9%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           ++IF + S    R   +       L         R  +  +Y F      + D+  +   
Sbjct: 2   KEIFDKLSAECSRITTKRYSTSFSLGIHFLNKKLRHPIYAIYGFVRLADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +  ++ +D FE+        S++P       IV  Y +  +     +++   D     
Sbjct: 62  SFLLDKFKRDCFEAIEH---GISLNPVLNSFQQIVNAYHIDRELIELFLKSMEMDLNEQE 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASL---RVIKYAGIAQFIGQLICQLPIH 189
               + ++ Y    +  +  +   +                   G A      +  L   
Sbjct: 119 Y-TPQLYDEYILGSAQVVGLMCLRVFTEGNEQQYQLLKPSAMMLGSAFQKVNFLRDLNAD 177

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           Y    + YFP   L A     +  +  +                     +A   ++ +  
Sbjct: 178 YKNLSRTYFPNVDLRAFSNVEKQLIEVEIEAEFK---------------EALAGIKQLPS 222

Query: 249 DVFP-AFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYM 290
                 ++     + +    +    + ++S     +   +   M
Sbjct: 223 SSRSGVYLAYIYYKELFNKIKRATAEKVMSERIRISNGHKIGLM 266


>gi|291360377|gb|ADD97675.1| phytoene synthase [Pantoea agglomerans]
          Length = 295

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 76/270 (28%), Gaps = 7/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT----ARNPITRDMRLQWWKDIFES 86
                  A  L     R S+  LY +      V D       N        +      E 
Sbjct: 4   GSKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEM 63

Query: 87  STKGLIAESIS-PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
            T+  +   +  P       +   +D+   Y  D +     D +            Y + 
Sbjct: 64  KTRQPMRIQMHEPAFAAFQEVAMAHDILPAYAFDHLAGFAMDVHETRYQTLDDTLRYCYH 123

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
           ++  +  +   I+     +   R     G+A  +  +   +      G+ Y P   L   
Sbjct: 124 VAGVVGLMMAQIMGVRDNATLDRACD-LGLAFQLTNIARDIVEDAEAGRCYLPAAWLAEE 182

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVL 264
           GL RE+    QN   +S   +   E    Y   A   +  +      A      +   + 
Sbjct: 183 GLTRENLADPQNRKALSRVARRLVETAEPYYRSASAGLPGLPLRSAWAIATAQQVYRKIG 242

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
                 G +      + +   +   ++++S
Sbjct: 243 MKVVQAGSQAWEQRQSTSTPEKLALLVAAS 272


>gi|145350995|ref|XP_001419874.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580107|gb|ABO98167.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 302

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 90/283 (31%), Gaps = 12/283 (4%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           + T        +         R      Y A        R     LY +  EL  + D A
Sbjct: 3   RATSTSAATVEQARAQAKETTRTYARSFYWASQFMTKG-REDAYALYCWCRELDEIVDGA 61

Query: 68  R-NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQY-DLPNQYFLDMIEAHF 125
                 R  +L   +   E+  +       S   V L   + +   L    F DMI    
Sbjct: 62  DGADEERRAKLNRSEANLEAMFRKGTLTEPSYADVALSDTLARVEGLRIGPFKDMISGMR 121

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMI------LDSERYSASLRVIKYAGIAQFI 179
            D  +      +   +YA++++  +  +   I       D ++ +         GIA  +
Sbjct: 122 RDIDDARFERVEDVLNYAYQVAGTVALMILPILTLGSVDDEQKAAKREERGVALGIALQL 181

Query: 180 GQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLF 237
             ++  +      RG++Y   + L    L R+  LS    +      I+   +  L Y  
Sbjct: 182 TNIVRDVGEDARQRGRVYIADEDLKLFELTRDDVLSMKTPTTNYMALIEYQIQRALFYYS 241

Query: 238 KAREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSH 279
           KA E +  + P   P   +   + + +    + + +  +S   
Sbjct: 242 KALEGIDLLPPLARPPTKLIAGLYQRIAFAVRENDYDNLSKRA 284


>gi|88810638|ref|ZP_01125895.1| putative terpenoid synthase [Nitrococcus mobilis Nb-231]
 gi|88792268|gb|EAR23378.1| putative terpenoid synthase [Nitrococcus mobilis Nb-231]
          Length = 284

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 5/278 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               F            + A L +    R +L  L+ FH E+  +     +      +L 
Sbjct: 2   NAVEFCRDKAAPRGSSLHYALLFTEADKRAALLALHAFHAEVTEIVVECHDHQVAAAKLA 61

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW++      +G       P S  L + V++Y L   YF  ++E    D   +     ++
Sbjct: 62  WWREELARIFEGCG---SHPISQALHAPVQRYRLDRHYFEQILEGTQMDLEYNLYPSFRE 118

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              Y  R+   +  L+  +       A        G A  + + +  +  +   G+ Y P
Sbjct: 119 LSLYCHRLGCSIASLSVQVCGYRDRRAFDFAHD-LGTALQLTRFLRNVRRYAAAGRCYIP 177

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPV 257
              +   G++         S+ +       A+   ++  +A + +         P  +  
Sbjct: 178 EAEIRNAGVEWSDLQRSTTSEPVRRLFTEQADRARRFYAQASQRLPPTERWSQRPGLVLG 237

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +  S+L+   N  F ++   +    L + W    ++ 
Sbjct: 238 ELYRSLLEVMTNDHFPLLERRYHLTPLHKLWLAWRTAR 275


>gi|170692387|ref|ZP_02883550.1| Squalene/phytoene synthase [Burkholderia graminis C4D1M]
 gi|170142817|gb|EDT10982.1| Squalene/phytoene synthase [Burkholderia graminis C4D1M]
          Length = 300

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 31/284 (10%), Positives = 78/284 (27%), Gaps = 15/284 (5%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    E         +P     +L WW+
Sbjct: 19  EYCQQKAAPPGSSAYYALRQAPAASQPRLTALFALRREFEETVKEVSDPAIGRTKLAWWQ 78

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +   +           P +  L + +            ++     D       D      
Sbjct: 79  NELGALAA---GSPTHPVAKALAASLPDVKAEYPALQTLLGGFEMDLDQARYLDYPNLRR 135

Query: 142 YAFRISSRLIHLATMILD-----------SERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
           Y   +      L                     + +       G A  + QL+ +     
Sbjct: 136 YVQAVGGTFAALVARAASTNGSTSAHTSAPTDGAQAPGWSTPLGEALLLAQLVAETGNDA 195

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
             G++Y P+D +    +     ++ + SD  +  ++   +     L  A   +       
Sbjct: 196 RHGRIYIPIDEMQRFSVTAADLINRKYSDAFTELMRFQTKRARDALHSALAAVPRSERRS 255

Query: 251 FPAFIP-VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               +   ++  ++L   +  G+ ++        + + W    +
Sbjct: 256 QRTLLAQGALAGALLDEIERDGYHVLHQRIALTPVRKLWIAWRA 299


>gi|261400718|ref|ZP_05986843.1| squalene synthase HpnC [Neisseria lactamica ATCC 23970]
 gi|313668095|ref|YP_004048379.1| transferase [Neisseria lactamica ST-640]
 gi|269209480|gb|EEZ75935.1| squalene synthase HpnC [Neisseria lactamica ATCC 23970]
 gi|313005557|emb|CBN86993.1| putative transferase [Neisseria lactamica 020-06]
          Length = 270

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 79/269 (29%), Gaps = 6/269 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGCMPSEVRLAGLEGLRRELDVLAS 64

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L +  V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVAPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +       +  +       A  +      + + + +G++Y P D L   G+ 
Sbjct: 123 PVGRIMLALYGKTDAVSVAQ-SDGICTALQLVNFWQDVAVDWQKGRVYLPQDDLLKFGVS 181

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHA 267
                 G+        +        + L       R +   +      + +  + +L+  
Sbjct: 182 EGQIAEGRADAVFQRLMAYECRRAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKL 241

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               + + +     ++      +  +  K
Sbjct: 242 DACRYDVFAQRPVLDKKDWLIMLKRALWK 270


>gi|162147407|ref|YP_001601868.1| putative phytoene synthase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785984|emb|CAP55565.1| putative phytoene synthase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 307

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 92/279 (32%), Gaps = 7/279 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D   V   +            +  P  R  +  +Y F   +  V D    P  +   L+
Sbjct: 33  ADLAQVESVVVASGTSFGKGMRILAPDRRYGMYAVYAFCRLVDDVADDDGTPEDKSALLR 92

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCK 137
            W +            +       L  ++ ++DL    F  +I+    D+    +  D  
Sbjct: 93  AWHERIAGLYA---GRATDALDRVLSVVIARFDLRQADFDAVIDGMMMDAQGPIVAPDEA 149

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
            F+ Y  R++S +  L+  +       A      + G A  I  ++  +     RG+LY 
Sbjct: 150 TFDLYCDRVASAVGRLSVRVFGDASAEADRVAF-HLGRALQITNILRDVAEDAQRGRLYL 208

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIP 256
           P ++L    +  ++  + +    +    ++ A     +   A   M         PA + 
Sbjct: 209 PRELLTRFDVPLDAARAVRAR-GLEGVGRVLAGRARDHFRAAHRAMARCDRHAMRPARLM 267

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +   ++L   +  G++      + ++  +      + +
Sbjct: 268 GATYSAILTAQEKQGWRHPERRVSLSRPRKLLIAARALV 306


>gi|182434759|ref|YP_001822478.1| putative squalene/phytoene synthase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326775276|ref|ZP_08234541.1| squalene synthase HpnC [Streptomyces cf. griseus XylebKG-1]
 gi|178463275|dbj|BAG17795.1| putative squalene/phytoene synthase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326655609|gb|EGE40455.1| squalene synthase HpnC [Streptomyces cf. griseus XylebKG-1]
          Length = 303

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 85/289 (29%), Gaps = 20/289 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR------------ 76
           +  D +  +A    P  +R  L  +Y F   +  + D    P   D R            
Sbjct: 16  KAADENFPVAPFFLPRAWRGDLMAVYGFARLVDDIGDGDLAPGGADARHLGLEPEQSDDR 75

Query: 77  ---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  ++            E   P   +L   VR+  L  + FL +IEA+  D      
Sbjct: 76  LAMLDAFEADLHRVFATTGEEPRHPLLRDLRPTVRRRALTPEPFLGLIEANRQDQKIRRY 135

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                   Y    ++ +  L   +  +       R       A  I + +  +     R 
Sbjct: 136 ATYADLAAYCELSANPVGRLVLALTGTTSPERVRR-SDAVCTALQIVEHLQDVAEDLERD 194

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + +    +      +      +   I   A+   + L +    +  +   +   
Sbjct: 195 RIYLPAEDMARFRVAETDLAAPSAGASVRALIAYEAQRASELLDEGPPLVGSVDGRLKLL 254

Query: 254 FI-PVSITESVLKHAQNHGFKIVSHSHTPNQ---LVRPWYMLSSSIKKR 298
               V    S L      GF ++     P +   L     +L  +  +R
Sbjct: 255 LAGFVGGGRSALTAISAAGFDVLPGPPKPTKPSLLREVGTVLRRARGER 303


>gi|72536077|gb|AAZ73143.1| phytoene synthase [Enterobacteriaceae bacterium DC416]
          Length = 309

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 74/276 (26%), Gaps = 8/276 (2%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQW 79
           + +         A  L  P  R S   LY +      V D              D + + 
Sbjct: 12  QTMAQGSKSFASATRLFDPSTRRSTLMLYAWCRHCDDVIDGQTLGEGGTQHAVADAQARM 71

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
                E+      A    P       +   + LP Q   D +E    D+  +        
Sbjct: 72  RHLQIETRRAYSGAHMDEPAFRAFQEVALTHQLPQQLAFDHLEGFAMDAREERYACFGDT 131

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y + ++  +  +   ++        L      G+A  +  +   +      G+ Y P 
Sbjct: 132 LRYCYHVAGVVGLMMARVMGVRD-ERVLDHACDLGLAFQLTNIARDIVEDAENGRCYLPQ 190

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS- 258
             L   GL        Q+   ++            Y   AR  +  +      A      
Sbjct: 191 SWLDEAGLSAAQLADPQHRAALAPLAARLVREAEPYYQSARSGLPGLPLRSAWAIATARG 250

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           +   +    Q+ G +        ++  +   ++  +
Sbjct: 251 VYREIGVKVQHAGARAWDTRQRTSKGEKLALLVKGA 286


>gi|282866074|ref|ZP_06275122.1| squalene synthase HpnC [Streptomyces sp. ACTE]
 gi|282559113|gb|EFB64667.1| squalene synthase HpnC [Streptomyces sp. ACTE]
          Length = 306

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 20/289 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR------------ 76
           +  D +  +A    P  +R  L  +Y F   +  + D    P   D R            
Sbjct: 19  KAADENFPVAPFFLPRAWRDDLMAVYGFARLVDDIGDGDLAPGGADARHLGVDPERSEDR 78

Query: 77  ---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  ++                P    L   VR+  L    FL +IEA+  D      
Sbjct: 79  LAVLDAFEADLHRVFAYTGDGPHHPLLRALRPTVRRCALTPDPFLGLIEANRQDQKVRRY 138

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y    ++ +  L   I  +       R       A  I + +  +     R 
Sbjct: 139 ATYDELVAYCELSANPVGRLVLQITGTASPERIRR-SDAVCTALQIVEHLQDVAEDLARD 197

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + +    +  +   +      +   I   ++   + L +    +  +   +   
Sbjct: 198 RIYLPAEDMARFHVGEDDLAAATAGASVRALIAFESQRAHELLDEGTALVGSVHGRLRLL 257

Query: 254 FI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP---WYMLSSSIKKR 298
               V+   + L      GF ++     P           +L  + ++R
Sbjct: 258 LAGFVAGGRAALGAVSAAGFDVLPGPPKPTAPRLLRDVGAVLRRAHRER 306


>gi|313675573|ref|YP_004053569.1| phytoene synthase [Marivirga tractuosa DSM 4126]
 gi|312942271|gb|ADR21461.1| Phytoene synthase [Marivirga tractuosa DSM 4126]
          Length = 280

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 82/292 (28%), Gaps = 26/292 (8%)

Query: 15  KIFSRDSLFVLRNLR-DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           ++F++ +    + +         L        +   +  +Y F      + DT       
Sbjct: 5   ELFNQTTFECSKLITNRYSTSFSLGIKSLDKKFHYPIYAIYGFVRYADEIVDTFHEKDKS 64

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
            +   +    +E+    +   S++P       +V +Y + +      + +   D  +   
Sbjct: 65  ALLRDFKAQTYEAIESQI---SLNPVLHCFQMVVNEYQIDHDLIEAFLHSMEMDLLDIDY 121

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASL---RVIKYAGIAQFIGQLICQLPIH- 189
                +E Y +  +  +  +   I      +         K  G A      +  +    
Sbjct: 122 E-QSSYEEYIYGSAEVVGLMCLKIFCEGNENEYQKLVPSAKSLGSAFQKVNFLRDIKSDY 180

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           Y RG++YFP        +  +                       K    A E +  +   
Sbjct: 181 YERGRVYFPGVDFNDFSVSHKE---------------KIQADIQKDFDHAYEGIVKLPRG 225

Query: 250 VFP-AFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKRF 299
                ++  +    +    +      I+          + + +L S +K +F
Sbjct: 226 ARWGVYLAYTYYLKLFDKIKRFPPNKILEERVRVPDSKKLFLLLGSYVKHQF 277


>gi|254247960|ref|ZP_04941281.1| Phytoene/squalene synthetase [Burkholderia cenocepacia PC184]
 gi|124872736|gb|EAY64452.1| Phytoene/squalene synthetase [Burkholderia cenocepacia PC184]
          Length = 343

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 81/277 (29%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    EL        +P     +L WW 
Sbjct: 71  DYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 130

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 131 KELAALAD---GQPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQR 187

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      S   +         G A  + Q + +L      G++Y P+D 
Sbjct: 188 YIAQVGGTFASLVARAS-SANPADPQPWAADIGRALMLAQFVQELGNDARHGRIYLPIDE 246

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 247 LQRYNVTAADLLNRRYSPAFTELLQFQTTRAREALAAADAAIPAAERRAQRTLRAQIALA 306

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L      G++++        + + W    ++ ++
Sbjct: 307 GALLDEIARDGYQVLHQRIALTPIRKLWIAWRAARRR 343


>gi|169780110|ref|XP_001824519.1| phytoene synthase [Aspergillus oryzae RIB40]
 gi|83773259|dbj|BAE63386.1| unnamed protein product [Aspergillus oryzae]
          Length = 587

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 96/327 (29%), Gaps = 31/327 (9%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           VL     N    +K F       +  L       Y+   +    +RI L  LY F     
Sbjct: 261 VLARFVTNKYHPDKQFVASLRKAVDRLAASSQSMYMGSAMFQGPFRIDLILLYSFFRVAD 320

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGL--------IAESISPFSVELLSIVRQYDLP 113
            + D +++  +  M ++    + E+               E+  P   EL++ +    + 
Sbjct: 321 DLVDESQDTESARMIIEQCDQLLEAKFSHPELFPFSPGYQEAKHPAPPELIAAIDSLPVS 380

Query: 114 N---QYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSERYS 164
               ++   +IE    D                  + YA+ ++S +      ++      
Sbjct: 381 RLRLEHLKGLIEGFRTDLTFSAKPGSFPFVTESDLDTYAYHVASSVAASMLGLVVHHFPD 440

Query: 165 ASLRVI-----------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
               +            +  G       +   +       ++Y P   L   GL  E  L
Sbjct: 441 HQFAINVFLRRRVVDAGERMGQTLQYINVARDIARDAAINRVYLPTTWLKQQGLGPEDVL 500

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNH-G 271
           +     R+ L      +        AREEM+++  +V   F+        +    +    
Sbjct: 501 ASPTDSRLELVRDRLLDRAEFLSASAREEMKFLPDEVQGPFLATVDSYLEIGAALRRGMR 560

Query: 272 FKIVSHSHTPNQLVRPWYMLSS-SIKK 297
            + +          R W    + + +K
Sbjct: 561 PRTLDDKLRLPLGTRLWVAYRAMAWRK 587


>gi|326468441|gb|EGD92450.1| hypothetical protein TESG_00026 [Trichophyton tonsurans CBS 112818]
 gi|326482589|gb|EGE06599.1| carotene cyclase [Trichophyton equinum CBS 127.97]
          Length = 595

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 96/316 (30%), Gaps = 27/316 (8%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           FLT++    +K   ++    +  L+      YL   L     R+ L  LY F  +   + 
Sbjct: 278 FLTRSRHHCDKNVLQEMSQAITLLKQKSQSMYLGSALFEGQIRLDLIALYSFCRKADDLI 337

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESIS------------PFSVELLSIVRQYDL 112
           D A N  T    ++  +   E   K   A                      + ++    L
Sbjct: 338 DDAPNHETAQYWIKQCEKALELRFKFKGAALDDKAAYERMTKSIPQLLHAAVHLLPVSRL 397

Query: 113 PNQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
           P     D+++    D   D       I      E YA+ ++  +  L   ++        
Sbjct: 398 PKGPLSDLLKGFEIDLKFDPERGVFPIATEHDLEVYAYHVAGTIATLLLELVFCHHPVPI 457

Query: 167 LRVIKY--------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNS 218
               +          G A     +   +      G++Y P   L   GL     ++   +
Sbjct: 458 SDSERLRVISAGEGMGRALQYTNIARDIVRDAEIGRVYIPTLWLAEQGLTPSMVINQPKN 517

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSH 277
            ++    +   +   K     +E +  +  +V  P    V++   + +  + +  K  + 
Sbjct: 518 PKLIPLRRRLLDTAEKCYRDTQEAISELPANVRGPVRATVTVYMDIGQVIRENERKFWNG 577

Query: 278 SHTPNQLVRPWYMLSS 293
               ++  R      +
Sbjct: 578 KLKISRWRRFKGAWLA 593


>gi|329120862|ref|ZP_08249521.1| phytoene/squalene synthetase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327459672|gb|EGF06014.1| phytoene/squalene synthetase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 322

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 79/270 (29%), Gaps = 6/270 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +     P   R  +  +Y F      + D       + +  L   ++      +
Sbjct: 56  HYENFPVGSWALPRRLRRPVHAVYAFARYADDLADEGAAEAAQRLAALDALREELGRIGR 115

Query: 90  GLIAESISPFSVELLSI-VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           G +    +     L    V  + LP Q F D+++A   D       +  +   Y    ++
Sbjct: 116 GEV--PQTDLVRRLNDEAVAPFALPLQPFYDLLDAFSQDVVKTRYQNFAELADYCRHSAN 173

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  +   +       +  +       A  +      +   + +G++Y P D L    + 
Sbjct: 174 PVGRIMLHLYGESDTRSIAQ-SDGICTALQLINFWQDVAADWQKGRVYIPQDDLAKFKVT 232

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKHA 267
            E   +G+        +    E   K L       R +   +      + +    +L+  
Sbjct: 233 EEQIAAGRADFAFQRLMAYQCERAFKMLKAGSPLGRTLKGRIGLELRMIVVGGQMILQKL 292

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               + +        +      +  + +KK
Sbjct: 293 DACRYNVFEERPVLAKQDWWLIVKRAVMKK 322


>gi|221215044|ref|ZP_03588011.1| squalene synthase HpnD [Burkholderia multivorans CGD1]
 gi|221164980|gb|EED97459.1| squalene synthase HpnD [Burkholderia multivorans CGD1]
          Length = 277

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 80/277 (28%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 5   DYCQQKAAPAGSSVYYALRQAPAAVEPRLTALFALRRELEETVKEISDPTVGHTKLAWWH 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 65  KELAALAN---GQPSHPVTQALARHHPSIAAEADALRTLVNGYGMDLEQARYLDFANLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++             + +           G A  + Q + +L      G++Y P+D 
Sbjct: 122 YVAQVGGT-FAALVARAAAAQPGDPQPWAADVGRALMLAQFVQELGNDARHGRIYLPIDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 181 LQRYNVTAADLLNRRYSPAFTELMQFQTARAREALDAADAAIPAAERRAQRTLRAQIALA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 241 RALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 277


>gi|161524510|ref|YP_001579522.1| squalene synthase HpnD [Burkholderia multivorans ATCC 17616]
 gi|160341939|gb|ABX15025.1| squalene synthase HpnD [Burkholderia multivorans ATCC 17616]
          Length = 352

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 80/277 (28%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 80  DYCQQKAAPAGSSVYYALRQAPAAVEPRLTALFALRRELEETVKEISDPTVGHTKLAWWH 139

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 140 KELAALAN---GQPSHPVTQALARHHPSIAAEADALRTLVNGYGMDLEQARYLDFANLQR 196

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++             + +           G A  + Q + +L      G++Y P+D 
Sbjct: 197 YVAQVGGT-FAALVARAAAAQPGDPQPWAADVGRALMLAQFVQELGNDARHGRIYLPIDE 255

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 256 LQRYNVTAADLLNRRYSPAFTELMQFQTARAREALDAADAAIPAAERRAQRTLRAQIALA 315

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 316 RALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 352


>gi|325179482|emb|CCA13879.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 309

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 9/283 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQWWKDI 83
              ++  DY  Y   LL P  +R +   +  F+ E  R+RD A        +R+QWW++ 
Sbjct: 28  RETVKTYDYTNYFCGLLFPQDHREAYFAIRAFNVETARIRDMAHGKLAPGTIRMQWWREK 87

Query: 84  FESSTKGLIAES--ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
            +S            S    EL   V +  L   +F  +++A   D   +     +Q   
Sbjct: 88  IQSLFTSPSRSPSYDSVLLKELAHTVNEKQLTRLWFDRILDARDRDLETEDYQTLEQLVL 147

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y+   +S L++L   +L     +A  ++  +AG+A  +  L+  +P H  + Q Y P ++
Sbjct: 148 YSEYTTSSLLYLTLELLGVRDETA-DQIASHAGVAIGLSNLLRAVPFHVTQQQTYMPQEL 206

Query: 202 LGAVGLDRESFLSGQNSD----RISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
                LD E       +       +  I+       ++L  AR     +     PAF  +
Sbjct: 207 FSKYNLDDEMLAHALQNPLHGEVFAPIIEEIVLKIREHLDMARALQSKLPIVARPAFTTI 266

Query: 258 SITESVLKHAQNHGFKIVSHS-HTPNQLVRPWYMLSSSIKKRF 299
           + TES L   QN  + +   +      L   + ++ +   +RF
Sbjct: 267 AATESYLHQLQNANYNVFEQNLLQFRPLSIHFRIMKAHFLRRF 309


>gi|167645675|ref|YP_001683338.1| squalene/phytoene synthase [Caulobacter sp. K31]
 gi|167348105|gb|ABZ70840.1| Squalene/phytoene synthase [Caulobacter sp. K31]
          Length = 309

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 84/275 (30%), Gaps = 10/275 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQ 78
              ++        A  L     R     LY +      V D                RL+
Sbjct: 9   REAIQKGSKSFAAAAALFDAQTRADAEMLYAWCRHCDDVIDGQTLGHGMSPVADAPARLE 68

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
                  +           P      ++  +  +P +Y LDMI+    D          +
Sbjct: 69  ALYTQTRA--AMAGETPTDPVFAAFQTVALRRGIPERYALDMIDGFAMDVSGRRYATLDE 126

Query: 139 FEHYAFRISSRLIHLATMILDSERYS-ASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
              Y + ++  +  +  +++  +  +  +LR  +  G+A  +  +   +      G++Y 
Sbjct: 127 LLDYCWGVAGVVGTMMALVMGVKPDALPTLRRAQDLGLAFQLTNIARDIVEDARNGRVYV 186

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P D L  +G+ +++     +   +++  K   +    Y   AR  +R +      A    
Sbjct: 187 PGDWLAELGVPQDAVADPAHRAAVAVLAKRLVDAAEPYYASARWGLRDLPVRCAWAIGAA 246

Query: 258 S-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             +   +       G          +  ++ W  L
Sbjct: 247 RGVYRQIGLDVVKAGDHAWDERVVVSGRMKAWRAL 281


>gi|119713710|gb|ABL97760.1| crtB phytoene synthase [uncultured marine bacterium EB0_41B09]
          Length = 295

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 89/275 (32%), Gaps = 13/275 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
           + +++     + A           L  +Y F   L  + DT+         +        
Sbjct: 6   KIMQEHGKSFFWASWFLDKNTANKLFAVYAFCRRLDDLVDTSNRNSEAKEEIA----KVI 61

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
           S T     +  S     L S +          ++ ++    D       D  Q   Y +R
Sbjct: 62  SLTNNSQYKETSEEFKSLDSKLH---PRQDIIIEFLKGQLSDLDFRQPNDLGQLLKYCYR 118

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
           ++  +  +   +LD    S         GIA  +  +   +      G++Y P +   ++
Sbjct: 119 VAGVVGLMICDVLDIHD-SKLRYFAIDFGIAMQLTNICRDIKEDAQIGRIYLPKNETISL 177

Query: 206 GLDRESFLSGQNSDRISLAIKI--FAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITES 262
           G++  +F S  N+D I +        +L  +Y       +  +   +  +F+  S I + 
Sbjct: 178 GIN--NFRSPSNTDLIIINSSRDKLIKLADEYYQSGICGINQLPKKIKRSFMVASNIYQG 235

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +        +         ++  +    + + +K+
Sbjct: 236 IGHKILKKRYSFNEQRVYLSKFEKLNLTIKTFLKR 270


>gi|332043152|gb|EGI79349.1| Phytoene synthase [Lacinutrix algicola 5H-3-7-4]
          Length = 279

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 84/290 (28%), Gaps = 25/290 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S    + + +       +A  +     R  +  +Y F      + D+  +   
Sbjct: 2   KALFDSVSFNCSKIVTQSYSTSFSMATKMLANSIRQDIYNIYGFVRFADEIVDSFHDYNK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            ++ L  +++  E+    +   S++P          +Y L  Q     I++   D    +
Sbjct: 62  SEL-LDTFENDLEN--ALINKISLNPILNAFQHTYHKYGLDKQMVNAFIKSMRLDLTKTN 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
                +++ Y +  +  +  +   +           +       G A      +  L   
Sbjct: 119 YLTDIEYKDYIYGSADVVGLMCLKVFVKGDNEKYQELKDSAMSLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +H   + YFP   L                +          +       K    ++ +  
Sbjct: 179 FHDLERTYFPNTDLNN------------LDENAKQL---IIKDIENDFAKGLVGIKLLPI 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIK 296
           +  F  F+       +LK  +     +I +         +   +  S +K
Sbjct: 224 EAKFGVFMAYRYYSQLLKKLKKTPALEIKAARIRVANYKKVELLTRSYVK 273


>gi|254385935|ref|ZP_05001253.1| squalene/phytoene synthase [Streptomyces sp. Mg1]
 gi|194344798|gb|EDX25764.1| squalene/phytoene synthase [Streptomyces sp. Mg1]
          Length = 309

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 86/288 (29%), Gaps = 20/288 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD---------------TARNPITR 73
           +    +  +A    P  +R  L+ +Y +   +  + D                      R
Sbjct: 22  KAAAENFPVAPFFLPRAWREGLTAVYGYARLVDDIGDGDLAPGGRDAVLLGLDPAAVDDR 81

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  ++        G       P  + L  +VR + L  + FL +IEA+  D      
Sbjct: 82  LAMLDAFEADLLRVFGGADGPPRHPLLLALRPVVRDHGLTPEPFLGLIEANRQDQRVTRY 141

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
              +    Y    ++ +  L   +  +       R       A  I + +  +     R 
Sbjct: 142 ETYEDLLAYCELSANPVGRLVLSLTGTSTPERIRR-SDAVCTALQIAEHLQDVAEDLGRD 200

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P   +    +      +      +   +   AE   + L +    +  +   +   
Sbjct: 201 RIYLPGQDMRRFHVTETDLKAPTAGASVRALVAFEAERARELLGEGTPLVGSVHGRLRLL 260

Query: 254 FI-PVSITESVLKHAQNHGFKIVSHSHTPNQ---LVRPWYMLSSSIKK 297
               V    + L+     GF ++     P +   L     +L ++ +K
Sbjct: 261 LAGFVGGGRAALRAVGAAGFDVLPGPPKPTKTGLLREVATVLRTAPRK 308


>gi|92430260|gb|AAW72815.2| CrtB [Pantoea sp. C1B1Y]
          Length = 296

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 77/273 (28%), Gaps = 12/273 (4%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPITRDMRLQWWKD 82
                  A  L     R S+  LY +      V D           +  + + RL   + 
Sbjct: 4   GSKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEM 63

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               +  G       P       +   +D+   Y  D +     D +            Y
Sbjct: 64  KTRQAYAGSQMHE--PAFAAFQEVAMAHDILPAYAFDHLAGFAMDVHETRYQTLDDTLRY 121

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
            + ++  +  +   I+     +   R     G+A  +  +   +      G+ Y P   L
Sbjct: 122 CYHVAGVVGLMMAQIMGVRDNATLDRACD-LGLAFHLTNIARDIVEDAEAGRCYLPAAWL 180

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITE 261
              GL RE+    QN   +S   +   E    Y   A   +  +      A      +  
Sbjct: 181 AEEGLTRENLADPQNRQALSRVARRLVETAEPYYRSASAGLPGLPLRSAWAIATAQQVYR 240

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +       G +      + +   +   ++++S
Sbjct: 241 KIGMKVVQAGSQAWEQRQSTSTPEKLALLVAAS 273


>gi|46203011|ref|ZP_00052223.2| COG1562: Phytoene/squalene synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 298

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 2/266 (0%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +          R+ D DRY A L +P  +R  L  L  F   + RVR+ A NP+  ++R
Sbjct: 19  LAFAFRHCEELAREGDPDRYFAALFAPAAFRPHLFALIAFSLTIARVREAASNPMAGEIR 78

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  +   +G +    +P +  L   +    L  Q F+D+I+A  FD Y+D +   
Sbjct: 79  LQWWRDALQGEARGDV--RANPVAAALDDAIVTRRLGRQPFVDLIDARVFDLYDDPMPRV 136

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
              E Y    +S LI L+ ++L             +AG+A  I  L+  LP H  +GQ+Y
Sbjct: 137 NDLEGYCGETASSLIRLSALVLADGAEPGGAAAAGHAGVAYGITGLLRALPWHARQGQVY 196

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P D+L   G+ RE  +SG+    +         L  ++L         I P   PAF+P
Sbjct: 197 LPGDLLRQNGVTREDIVSGRGGPGLIRTCAELRALARRHLASCEAARATIAPAARPAFLP 256

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPN 282
           +++ E  L   +  G+  ++      
Sbjct: 257 LTLVEPYLAAMERPGYDPLNSQIEIP 282


>gi|209543973|ref|YP_002276202.1| squalene synthase HpnD [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531650|gb|ACI51587.1| squalene synthase HpnD [Gluconacetobacter diazotrophicus PAl 5]
          Length = 298

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 92/279 (32%), Gaps = 7/279 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D   V   +            +  P  R  +  +Y F   +  V D    P  +   L+
Sbjct: 24  ADLAQVESVVVASGTSFGKGMRILAPDRRYGMYAVYAFCRLVDDVADDDGTPEDKSALLR 83

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCK 137
            W +            +       L  ++ ++DL    F  +I+    D+    +  D  
Sbjct: 84  AWHERIAGLYA---GRATDALDRVLSVVIARFDLRQADFDAVIDGMMMDAQGPIVAPDEA 140

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
            F+ Y  R++S +  L+  +       A      + G A  I  ++  +     RG+LY 
Sbjct: 141 TFDLYCDRVASAVGRLSVRVFGDASAEADRVAF-HLGRALQITNILRDVAEDAQRGRLYL 199

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIP 256
           P ++L    +  ++  + +    +    ++ A     +   A   M         PA + 
Sbjct: 200 PRELLTRFDVPLDAARAVRAR-GLEGVGRVLAGRARDHFRAAHRAMARCDRHAMRPARLM 258

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +   ++L   +  G++      + ++  +      + +
Sbjct: 259 GATYSAILTAQEKQGWRHPERRVSLSRPRKLLIAARALV 297


>gi|86142297|ref|ZP_01060807.1| phytoene synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831049|gb|EAQ49506.1| phytoene synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 279

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 81/292 (27%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           ++IF   S      + R        A  +  P  R  +  +Y F      + DT      
Sbjct: 2   KQIFDNVSQACSETVTRSYSTSFSTATRMLAPSIRQHIHNIYGFVRFADEIVDTFHAYD- 60

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           ++     ++   E++    I  S++P          ++ +        + +   D     
Sbjct: 61  KETLFNRFEQDLENALNDKI--SLNPILNSFQYTFHKFKIEKHLVDAFMHSMRLDLSKSK 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
               +++ +Y +  +  +  +   +           + +     G A      +  L   
Sbjct: 119 YLTQEEYNNYIYGSADVVGLMCLTVFVKGDRQKYEELKESAMSLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L  +    +                   E       K    +  +  
Sbjct: 179 FEELSRTYFPNTDLNELDEVSKQ---------------KIIEEIEADFAKGLSGICKLPV 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  +        +L   ++    +I +        V+   +  S +K R
Sbjct: 224 EAKFGVYTAYRYYRKLLSKLKSTPSLEIKNARIRVPNYVKASLLARSYVKYR 275


>gi|167903175|ref|ZP_02490380.1| putative phytoene synthase [Burkholderia pseudomallei NCTC 13177]
 gi|217421569|ref|ZP_03453073.1| putative phytoene synthase [Burkholderia pseudomallei 576]
 gi|226197163|ref|ZP_03792740.1| putative phytoene synthase [Burkholderia pseudomallei Pakistan 9]
 gi|217395311|gb|EEC35329.1| putative phytoene synthase [Burkholderia pseudomallei 576]
 gi|225930542|gb|EEH26552.1| putative phytoene synthase [Burkholderia pseudomallei Pakistan 9]
          Length = 280

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 84/279 (30%), Gaps = 6/279 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALA---SGHPSHPVSQALAAHHPDITRETDALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHL--ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           YA +       L  +         +   R  +  G A  + Q +  L     +G++Y P+
Sbjct: 122 YADQTGGMFAALVASASAGAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVPI 181

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVS 258
           D L   G+     L+ + S   +  ++         L  +   +               +
Sbjct: 182 DELQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALGA 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +  +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LALAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 280


>gi|300778587|ref|ZP_07088445.1| phytoene synthase [Chryseobacterium gleum ATCC 35910]
 gi|300504097|gb|EFK35237.1| phytoene synthase [Chryseobacterium gleum ATCC 35910]
          Length = 278

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 81/279 (29%), Gaps = 29/279 (10%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQWWKDIFE 85
            R       L  L   P  R ++  +Y +      + D+    +      RL+      E
Sbjct: 17  TRKYSTSFSLGILALKPSIRPAIYAIYGYVRLADEIVDSFHGYDKEKLLTRLKA-----E 71

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
           + +      SI+P        VRQY +  Q     + +   D           +  Y + 
Sbjct: 72  TYSALEDGISINPILHSFQETVRQYKIDIQLINQFLHSMEMDLQKIDYNS-DLYNEYIYG 130

Query: 146 ISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDI 201
            +  +  +   I    + +++          G A      +  L   Y   G+ YFP   
Sbjct: 131 SAEVVGLMCLQIFTGGNKQQFEELKPYAMKLGSAFQKVNFLRDLKDDYQILGRTYFPALN 190

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           +     D +  +  +  +                  +A + ++ +     F  ++     
Sbjct: 191 MSVFDNDVKVRIEKEIDEEFR---------------EALQGIKKLPGSSMFGVYLAYKYY 235

Query: 261 ESVLKHAQNH-GFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            S+ +  +      I+ +        +      S I+ +
Sbjct: 236 LSLFEKIKKASSHHILQNRIRIANSQKLLVAFKSYIRYK 274


>gi|31790566|dbj|BAC77669.1| phytoene synthase [marine bacterium P99-3]
          Length = 279

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 85/292 (29%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNLR-DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F + S    + +         LA  +  P  R  +  +Y F      + DT  +   
Sbjct: 2   KSLFDQVSRECSKAVTHRYSTSFSLASKMLGPSIRQDIHNIYGFVRFADEIVDTFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           R +  ++ +D+  +    +   S++P        V +Y++    +   + +   D     
Sbjct: 62  RTLLDRFEEDVKRAIEDKI---SLNPILNSFQETVNKYNITPDMYGAFLNSMRLDLDKSV 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
               +++ +Y +  +  +  ++  +    D ++Y    +     G A      +  L   
Sbjct: 119 YLTDEEYRNYIYGSADVVGLMSLKVFVKGDEDKYEDLKQDAMRLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
                + YFP   L    L  E                       +        ++ +  
Sbjct: 179 LDTLERSYFPNTNL--HDLSEED-------------KARLITEIKEDFDAGLRGIQRLPV 223

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKR 298
           +     +        +L   +    + I +         +   +    +  R
Sbjct: 224 EAKLGVYTAYVYYRRLLTRLERTPSREIRNTRIRVPNYEKIGLLAKGYVSCR 275


>gi|107027514|ref|YP_625025.1| squalene/phytoene synthase [Burkholderia cenocepacia AU 1054]
 gi|105896888|gb|ABF80052.1| Squalene/phytoene synthase [Burkholderia cenocepacia AU 1054]
          Length = 286

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 27  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLNRWRADIDACFAGRP- 85

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R ++L    F  MI+    D+  D    D    + +  R++S    
Sbjct: 86  -PRH--LVALDREIRAFNLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 142

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 143 LSVRIFGMPEAEGIA-LSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 201

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 202 ATIVRDPALPRVCATLVERALEHFCQADAVMDTCPRAQVKAPRIMSGAYRCILEAAIARG 261

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 262 FAAPRAPLRKPKARMLMIAARYAL 285


>gi|206564670|ref|YP_002235433.1| squalene/phytoene synthase [Burkholderia cenocepacia J2315]
 gi|198040710|emb|CAR56696.1| squalene/phytoene synthase [Burkholderia cenocepacia J2315]
          Length = 282

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 83/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLDRWRADIDACFAGRP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                    L   +R ++L    F  MI+    D+  D    D    + +  R++S    
Sbjct: 82  -PRH--LAALDREIRAFNLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPEAEGI-TLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 198 ATIVRDPALPRVCATLVERALEHFRQADAVMDTCPRAQVKAPRIMSGAYRCILEAAIARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|307294861|ref|ZP_07574703.1| Phytoene synthase [Sphingobium chlorophenolicum L-1]
 gi|306879335|gb|EFN10553.1| Phytoene synthase [Sphingobium chlorophenolicum L-1]
          Length = 317

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 89/277 (32%), Gaps = 10/277 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR------NPITRDMRLQ 78
             ++        LA  L     R     LY +  +   + D                RL 
Sbjct: 16  RESIARGSKSFALASKLFDRQTRERAWLLYAWCRKCDDIADGQDHGGTMRGVADGQARLS 75

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
             + +  ++ +G       P       ++R+  +P +Y  D+IE    D+          
Sbjct: 76  SIRVLTAAALRGEPT--GDPAFDGFGLVMRECAIPERYAHDLIEGFALDAREWRPRSEAD 133

Query: 139 FEHYAFRISSRLIHLATMILDSERY-SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
              Y + ++  +  +  +++  +    A+L      G+A  +  +   +       + Y 
Sbjct: 134 MLRYCYHVAGTVGCMMAILMGVDPDDEATLDRACDLGLAFQLANIARDISEDEAADRCYL 193

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P + L  + +     +      R+++  +  A++   Y   AR     + P    A +  
Sbjct: 194 PEEWLVEMDIPPGEHMKPWVRPRLAILARRLADMAAAYEESARHGSGALPPRSAWAVLAA 253

Query: 258 S-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           + +   + +     G     H     +  +  ++L +
Sbjct: 254 AGVYGDIAREVARRGDHAWDHRVVTPKGDKLGWVLRA 290


>gi|170736924|ref|YP_001778184.1| squalene synthase HpnD [Burkholderia cenocepacia MC0-3]
 gi|169819112|gb|ACA93694.1| squalene synthase HpnD [Burkholderia cenocepacia MC0-3]
          Length = 282

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLNRWRADIDACFAGRP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R ++L    F  MI+    D+  D    D    + +  R++S    
Sbjct: 82  -PRH--LVALDREIRAFNLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPEAEGI-TLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 198 ATIVRDPALPRVCATLVERALEHFRQADAVMDTCPRAQVKAPRIMSGAYRCILEAAIARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|328886494|emb|CCA59733.1| Phytoene synthase [Streptomyces venezuelae ATCC 10712]
          Length = 303

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 78/284 (27%), Gaps = 18/284 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------------ARNPITRDMR 76
           +  D +  +A    P  +R  L  +Y F   +  + D                P T + R
Sbjct: 19  KAADENFPVAPFFLPRAWRDDLMAVYGFARLVDDIGDGDLAPGGADARHLGLAPRTAEDR 78

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L +         +    E   P    L+  VR+  L  + FL +I A+  D         
Sbjct: 79  LAFLDAFETDLRRVFDGEPRHPLLQGLVPTVRRCGLTPEPFLGLIAANRQDQLVGRYETY 138

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y    ++ +  L   I  ++      R       A  + + +  +       ++Y
Sbjct: 139 DDLLAYCELSANPVGRLVLAITGTDTPERIRR-SDEICTALQLVEHLQDVAEDLRNDRIY 197

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI- 255
            P + L    +  +          +   I   A      L      +  +   +      
Sbjct: 198 LPAEDLKRFHVTEDDLARPTAGASVRALIAFEAGRARDLLHAGTPLVGSVHGRLRLLLAG 257

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP----WYMLSSSI 295
                 + L    + G  +++      +          +L +  
Sbjct: 258 FTGGGHAALDAITDAGHDVLTGPPKATKPSLMRQVGAVLLRARR 301


>gi|254447272|ref|ZP_05060739.1| squalene/phytoene synthase [gamma proteobacterium HTCC5015]
 gi|198263411|gb|EDY87689.1| squalene/phytoene synthase [gamma proteobacterium HTCC5015]
          Length = 287

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 84/291 (28%), Gaps = 8/291 (2%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
             +  +         L+       +  +A  L P   R  ++ +Y F      + D    
Sbjct: 1   MSQRSQSIEAAYQHCLKLAESHYENFPVASKLLPSKLRRPVAAIYAFARTADDIADEGDA 60

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +  TR  +L+  +   +   +     S  P    L   ++Q+ LP   F D+++A   D 
Sbjct: 61  DAQTRIKQLETLQTQLKRMER--GESSQDPIFTALSDAIKQHKLPLNLFEDLLDAFKQDV 118

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                 +      YA R ++ +  L   +  ++    +L+       A  +      +  
Sbjct: 119 TTTRYQNIDDVLDYARRSANPVGRLMLHLTQNDS-EENLQDSDKVCSALQLINFYQDIQQ 177

Query: 189 HYHRG-QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
                 ++Y PLD L +  L  E          +   ++       K L         + 
Sbjct: 178 DIQENDRIYIPLDELESYELGPEDIRMENQGAAMQALLQFQIHRAQKMLQDGATLGARLN 237

Query: 248 PDVFPAFIPVSITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                    +      +           +      N+      +  +  K+
Sbjct: 238 GRFGIEIRFIIAGGLRICYKLSQQDD--LYSRPRLNRSDWIRILFVALFKR 286


>gi|167744408|ref|ZP_02417182.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 14]
          Length = 265

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 80/255 (31%), Gaps = 7/255 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 16  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 76  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 132 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L+ A   G
Sbjct: 191 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 250

Query: 272 FKIVSHSHTPNQLVR 286
           F          +   
Sbjct: 251 FAPPRAPLRKPRARM 265


>gi|53719701|ref|YP_108687.1| putative transferase [Burkholderia pseudomallei K96243]
 gi|167821727|ref|ZP_02453407.1| putative transferase [Burkholderia pseudomallei 91]
 gi|52210115|emb|CAH36093.1| putative transferase [Burkholderia pseudomallei K96243]
          Length = 280

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 84/279 (30%), Gaps = 6/279 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALA---SGHPSHPVSQALAAHHPNIARETDALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHL--ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           YA +       L  +         +   R  +  G A  + Q +  L     +G++Y P+
Sbjct: 122 YADQTGGMFAALVASASAGAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVPI 181

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVS 258
           D L   G+     L+ + S   +  ++         L  +   +               +
Sbjct: 182 DELQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALGA 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +  +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LALAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 280


>gi|83593094|ref|YP_426846.1| putative phytoene synthase protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83576008|gb|ABC22559.1| putative phytoene synthase protein [Rhodospirillum rubrum ATCC
           11170]
          Length = 282

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 3/281 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           + D   +   +RD D +R+   L +P   R +L  LY F+ E+ R+ +T    +  +MRL
Sbjct: 4   AEDLSPLAGAVRDFDPNRFQTALFAPAEQRENLMALYAFNVEIARIAETVSEALIGEMRL 63

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           QWW D+ E +  G +     P    +  ++    L        I A   D   +      
Sbjct: 64  QWWHDLCEGAFSGAVIARGHPVGEAMERLIAGGRLDRPTLSAAIAARRLDLAAEPFATPA 123

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               YA   +  L  +A  +L ++  + +     + G A  +  ++  L     +G+LY 
Sbjct: 124 DLRGYAEDTAGGLSRMAAALLGADPSTIAA--AGHVGTAWGLLGVVRTLCPMAAQGRLYL 181

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P  +    G+ RE   +   ++                L +AR   R I       F+  
Sbjct: 182 PSQLADERGVTREDLSAPPVTEAAKALCLDLVGEVEDLLAEARALRRRIDRRHLSPFLLA 241

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +    L   +  G            + RP+ +  + I+ R
Sbjct: 242 PLARPYLALLRQSGGDPADPGLW-TIVRRPFSLFWTGIRGR 281


>gi|85374806|ref|YP_458868.1| phytoene synthase [Erythrobacter litoralis HTCC2594]
 gi|84787889|gb|ABC64071.1| phytoene synthase [Erythrobacter litoralis HTCC2594]
          Length = 361

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 26/276 (9%), Positives = 76/276 (27%), Gaps = 10/276 (3%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD------TARNPITRDMRLQW 79
             + +       A  L     R  +  LY +      + D         +      R++ 
Sbjct: 43  EMIAEGSKSFASASKLFDRGTRERVWLLYAWCRRCDDIADGQDLGGELGDQSDIADRVKA 102

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
            + + + + +G               +  + +L  +   D+I     D+        +  
Sbjct: 103 IRVLTKRALEGQPT--ADIAFDAFGQVAAECNLTMEMANDVIAGFELDARGWRPRTGRDL 160

Query: 140 EHYAFRISSRLIHLATMILDSERYSAS-LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
             Y + ++  +  +   I+         L      G+A  +  +   +      G+ Y P
Sbjct: 161 ARYCYHVAGAVGVMMARIMGVRPEDEYTLARACDLGLAFQLANIARDMDEDDAAGRCYIP 220

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
            + L    ++    +   +    +   +       ++   AR     +      A +  +
Sbjct: 221 EEWLAEQDIEPGQLMKPHHRGEAADIARDLVLRMHRHQRAARLGTVRLPFRSRWAILAAA 280

Query: 259 -ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            I   +       G +         ++ +   +  +
Sbjct: 281 NIYSEIGYEVDRRGKQAWDRRVVIPRIKKLQLITRA 316


>gi|115351973|ref|YP_773812.1| squalene/phytoene synthase [Burkholderia ambifaria AMMD]
 gi|115281961|gb|ABI87478.1| Squalene/phytoene synthase [Burkholderia ambifaria AMMD]
          Length = 303

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 82/277 (29%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 31  DYCQQKAAPAGSSVYYALRQAPLAAEPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 90

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       E   P +  L                ++  +  D       D    + 
Sbjct: 91  KELAALAA---GEPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQR 147

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      +   +        AG A  + Q + +L      G++Y P+D 
Sbjct: 148 YIAQVGGTFASLVARAS-AANPADPQPWAADAGRALMLAQFVQELGNDARHGRIYLPIDE 206

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 207 LQRYNVTAADLLNRRYSPAFTELLQFQTARAREALAAADAAIPASERRAQRTLRAQIALA 266

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 267 GALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 303


>gi|126439688|ref|YP_001059379.1| putative phytoene synthase [Burkholderia pseudomallei 668]
 gi|126451477|ref|YP_001066649.1| putative phytoene synthase [Burkholderia pseudomallei 1106a]
 gi|167739072|ref|ZP_02411846.1| putative phytoene synthase [Burkholderia pseudomallei 14]
 gi|167846194|ref|ZP_02471702.1| putative phytoene synthase [Burkholderia pseudomallei B7210]
 gi|167894776|ref|ZP_02482178.1| putative phytoene synthase [Burkholderia pseudomallei 7894]
 gi|167911407|ref|ZP_02498498.1| putative phytoene synthase [Burkholderia pseudomallei 112]
 gi|242317869|ref|ZP_04816885.1| putative phytoene synthase [Burkholderia pseudomallei 1106b]
 gi|254297293|ref|ZP_04964746.1| putative phytoene synthase [Burkholderia pseudomallei 406e]
 gi|126219181|gb|ABN82687.1| putative phytoene synthase [Burkholderia pseudomallei 668]
 gi|126225119|gb|ABN88659.1| putative phytoene synthase [Burkholderia pseudomallei 1106a]
 gi|157806900|gb|EDO84070.1| putative phytoene synthase [Burkholderia pseudomallei 406e]
 gi|242141108|gb|EES27510.1| putative phytoene synthase [Burkholderia pseudomallei 1106b]
          Length = 280

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 84/279 (30%), Gaps = 6/279 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALA---SGHPSHPVSQALAAHHPDIARETDALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHL--ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           YA +       L  +         +   R  +  G A  + Q +  L     +G++Y P+
Sbjct: 122 YADQTGGMFAALVASASAGAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVPI 181

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVS 258
           D L   G+     L+ + S   +  ++         L  +   +               +
Sbjct: 182 DELQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALGA 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +  +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LALAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 280


>gi|332187265|ref|ZP_08389004.1| squalene/phytoene synthase family protein [Sphingomonas sp. S17]
 gi|332012686|gb|EGI54752.1| squalene/phytoene synthase family protein [Sphingomonas sp. S17]
          Length = 316

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 84/274 (30%), Gaps = 10/274 (3%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR------NPITRDM 75
                ++         A LL  P  R     LY +      + D                
Sbjct: 15  AAAKDSIARGSKSFAAASLLFDPETRERAWLLYAWCRRCDDIADGQDHGHGMTRVADAPA 74

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RL    D  E++  G +     P    L  +V +  +P+++  D+I     D+ +     
Sbjct: 75  RLAELTDKTEAALAGQVV--GDPAFDALRVVVAETGMPHRWPRDLIAGFALDAEDWRPQS 132

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERY-SASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                 Y + ++  +  +  + +       A+L      G+A  +  +   +      G+
Sbjct: 133 EADLYRYCYHVAGVVGCMMAVTMGVRPDDEATLDRACDLGMAFQLANIARDIAEDAGAGR 192

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPA 253
            Y P + L    +  ++ ++  +   ++   +   +   ++   AR     +     +  
Sbjct: 193 HYLPREWLAYKSIAPDAIMAPSHRPGLTALARRLTDQAARFEASARMGTPALSYRSAWAV 252

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
               +I  ++ +     G +         +  + 
Sbjct: 253 LSAAAIYGAIGRKVAKRGRRAWDSRVGTGKAEKL 286


>gi|254262298|emb|CAZ90622.1| Phytoene synthase crtB [Enterobacter pulveris]
          Length = 308

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 86/281 (30%), Gaps = 8/281 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRD 74
                + +         A  L     R S+  LY +      V D       +       
Sbjct: 6   LNHATQTMAAGSKSFNTAAKLFDAETRRSVLMLYTWCRHCDDVIDDQTLGFASGAVAEAS 65

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           +  +  +    +           P       +   + +P +  LD IE    D   +   
Sbjct: 66  IEQRLAELQRLTRRAYRGERMSDPAFAAFQEVALAHAIPERQALDHIEGFAMDVRGERYE 125

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
             +    Y + ++  +  +   ++     +A  +     G+A  +  +   +      G+
Sbjct: 126 TIEDTLRYCYHVAGVVGLMMARVMGVRDEAALDQACD-LGLAFQLTNIARDIVEDARNGR 184

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            Y P   L   GL +++F + +N  R++L  +   E    Y   A+  +  +      A 
Sbjct: 185 CYLPARWLHDAGLTQQNFAAPENRQRLALIARRLVEEAEPYYRSAKAGLGALPLRSAWAI 244

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
                +   +  +    G +        ++  +   ++S++
Sbjct: 245 ATARSVYREIGVNVVKAGPRAWDRRQGTSKTRKLTLLISAA 285


>gi|312891550|ref|ZP_07751063.1| Squalene/phytoene synthase [Mucilaginibacter paludis DSM 18603]
 gi|311295917|gb|EFQ73073.1| Squalene/phytoene synthase [Mucilaginibacter paludis DSM 18603]
          Length = 278

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 76/280 (27%), Gaps = 25/280 (8%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
               R       L         R  +  +Y F      + D+        +  +  +D F
Sbjct: 14  RETTRLYSTSFSLGIFFFNREVRRPIHAIYGFVRLADEIVDSFHEYPKSALLAELKEDCF 73

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           ++  +     S++P       +V QY +        + +   D         +++E Y  
Sbjct: 74  KAIER---GISVNPVINSFQQVVNQYGIGLNLISQFLNSMEMDLGEQDY-TPEKYEEYIM 129

Query: 145 RISSRLIHLATMILDSERYSAS---LRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLD 200
             +  +  +   +  +                G A      +  +   Y    + YFP  
Sbjct: 130 GSAQVVGLMCLHVFTNGNQEQFERLKIPAMKLGSAFQKVNFLRDVNADYQDLNRTYFPHV 189

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSI 259
            L +            +  R+        +  L  L  A   +R +        ++    
Sbjct: 190 NLSSF---------SDDDKRVIE------QDILSELNDALSGIRQLPQPCRKGVYLAYVY 234

Query: 260 TESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKR 298
              +         + ++S     +   + W M  S I+ +
Sbjct: 235 YRQLFHKISRVPAQKVMSQRIRVSNGHKFWLMFDSLIRYK 274


>gi|167900046|ref|ZP_02487447.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 7894]
          Length = 264

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 80/254 (31%), Gaps = 7/254 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 16  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 76  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 132 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L+ A   G
Sbjct: 191 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 250

Query: 272 FKIVSHSHTPNQLV 285
           F          +  
Sbjct: 251 FAPPRAPLRKPRAR 264


>gi|116693774|ref|YP_839307.1| squalene/phytoene synthase [Burkholderia cenocepacia HI2424]
 gi|116651774|gb|ABK12414.1| Squalene/phytoene synthase [Burkholderia cenocepacia HI2424]
          Length = 344

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 85  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLNRWRADIDACFAGRP- 143

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R ++L    F  MI+    D+  D    D    + +  R++S    
Sbjct: 144 -PRH--LVALDREIRAFNLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 200

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 201 LSVRIFGMPEAEGIA-LSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 259

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 260 ATIVRDPALPRVCATLVERALEHFCQADAVMDTCPRAQVKAPRIMSGAYRCILEAAIARG 319

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 320 FAAPRAPLRKPKARMLMIAARYAL 343


>gi|254254825|ref|ZP_04948142.1| CrtB phytoene synthase [Burkholderia dolosa AUO158]
 gi|124899470|gb|EAY71313.1| CrtB phytoene synthase [Burkholderia dolosa AUO158]
          Length = 290

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 80/264 (30%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 31  SFYLAMRILPAAQRDAMFQVYAFCRAVDDIADSDLPRAERSAGLERWRADIDACFAGRP- 89

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  + L   +R ++L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 90  -PRH--LIALEREIRAFNLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLYCDRVASAAGR 146

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I              + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 147 LSVRIFGMPEAEGIEL-SHHLGRALQLTNILRDIDDDAAINRCYLPRELLQREGIAIADP 205

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        +    +   A   M       V    I       +L+ A   G
Sbjct: 206 ATIAREPALPRVCATLVDRAYAHFRAADAVMDTCARAQVKAPRIMSGAYRCILEAAVARG 265

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          ++         ++
Sbjct: 266 FAAPRAPLRKPKMRMLLTAARYAL 289


>gi|154247505|ref|YP_001418463.1| squalene/phytoene synthase [Xanthobacter autotrophicus Py2]
 gi|15553721|gb|AAL02001.1|AF408848_3 phytoene synthase [Xanthobacter autotrophicus Py2]
 gi|154161590|gb|ABS68806.1| Squalene/phytoene synthase [Xanthobacter autotrophicus Py2]
          Length = 311

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 83/275 (30%), Gaps = 11/275 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-------ARNPITRDMRL 77
              +         A  L  P  R     LY +      V D          +  +   RL
Sbjct: 13  EEAINKGSKSFAAAARLFGPRMREDAVMLYAWCRHCDDVVDGQELGHGRVSSAASPAERL 72

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
               +   ++ +G    S  P       +V++ D+P +Y L ++E    D          
Sbjct: 73  DGLYEETRNAYRGAP--SAHPAFAAFAEVVKRNDIPERYPLQLLEGFRMDVEGRRYDTLD 130

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y + ++  +  +  +I+ +      L      G+   +  +   +      G++Y 
Sbjct: 131 DTLTYCYHVAGVVGVMMALIMGARD-EVVLDRASDLGLGFQLTNIARDVMEDAAIGRIYL 189

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM-RYILPDVFPAFIP 256
           P   L   G+   +  + ++   ++  +    ++   Y  +A   M              
Sbjct: 190 PAAFLAEAGVPEAAIAAPEHRAAVAGVVARLLDVAEPYYDQALIGMAALPFRAAAAVGAA 249

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             +  ++    +  G K      + +   +  ++ 
Sbjct: 250 RGVYRAIGIEVRKRGPKAWDTRVSTSTAQKAGFLA 284


>gi|171317242|ref|ZP_02906441.1| squalene synthase HpnD [Burkholderia ambifaria MEX-5]
 gi|171097617|gb|EDT42452.1| squalene synthase HpnD [Burkholderia ambifaria MEX-5]
          Length = 282

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLDRWRADIDACFAGQP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R +DL  + F  MI+    D+  D    D    + +  R++S    
Sbjct: 82  -PRH--LVALEREIRAFDLKREDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGIPEAEGIE-LSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++   A   M       V    I       +L+ A   G
Sbjct: 198 ATIVRDPALPRVCATLVERALEHFRAADAVMDTCTRAQVKAPRIMSGAYRCILEAAIARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|320007260|gb|ADW02110.1| squalene synthase HpnC [Streptomyces flavogriseus ATCC 33331]
          Length = 304

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 74/291 (25%), Gaps = 21/291 (7%)

Query: 17  FSRDSLFVLRNL----RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD------- 65
            +R             +  D +  +A    P  +R  L  +Y F   +  + D       
Sbjct: 1   MTRPQQACADAAATLDKAADENFPVAPFFLPRAWRDDLMAVYGFARLVDDIGDGDLAPGG 60

Query: 66  --------TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYF 117
                          R   L   +                P    L   VR+  L  + F
Sbjct: 61  ADARHLGLEPGQDEDRLAALDALEADLHRVFSPTGDGPRHPLMRALRPTVRRCALTPEPF 120

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQ 177
           L ++EA+  D              Y    ++ +  L   I  +       R       A 
Sbjct: 121 LGLLEANRQDQKVRRYETYGDLLAYCELSANPVGRLVLQITGTASPERIRR-SDAVCTAL 179

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            I + +  +     R ++Y P + +    +      +      +   +   AE     L 
Sbjct: 180 QIAEHLQDVAEDLGRDRIYLPAEDMARFRVGERELAAPSAGSAVRSLVAFEAERARALLD 239

Query: 238 KAREEMRYILPDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
           +    +  +   +       V    + L      GF ++     P      
Sbjct: 240 EGVPLVGSVHGRLKLLLAGFVGGGRAALGAISAAGFDVLPGPPKPTAPRLL 290


>gi|145349999|ref|XP_001419412.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579643|gb|ABO97705.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 293

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 92/296 (31%), Gaps = 8/296 (2%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR 68
           +T              +  +R  DY+ YL  L  P     +   +   + E   V   A 
Sbjct: 1   STSASTDDLRAAFRHCVEIVRARDYETYLCTLALPRASAPAAFAVRALNAETGSVVGNAE 60

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIV--RQYDLPNQYFLDMIEAHFF 126
           +      RL WW++   + +      +  P ++  L+ +          +   MIEA   
Sbjct: 61  SVDAAVARLMWWRETMTAGSA--GTRAGHPVALATLAALGNEPNARARTWMRRMIEARIA 118

Query: 127 DSYNDSIF-DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
           D+ +D         E YA       + LA          A    + + G A  +  L+  
Sbjct: 119 DARSDGPPRTIADLERYASDAHGSALTLALDACGVRNADA-DHAVSHLGQAIGLSALLRG 177

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
              H  + + Y P D     G+  ES    + S+ +       A     +L  AR     
Sbjct: 178 TVAHAKQRRCYLPSDACARHGVSTESVYRMEPSEGVRNVAHEVASAAKGHLDSARAMASR 237

Query: 246 ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPN--QLVRPWYMLSSSIKKRF 299
           +  D  P  +        L   +   F +   +       L+    +   + K+ +
Sbjct: 238 VPDDAKPFLLQAVPVGRYLDALEARDFDVFDEAVAKGGAPLLTQGAIAWHAFKRAY 293


>gi|221197625|ref|ZP_03570672.1| squalene/phytoene synthase family protein [Burkholderia multivorans
           CGD2M]
 gi|221204298|ref|ZP_03577316.1| squalene/phytoene synthase family protein [Burkholderia multivorans
           CGD2]
 gi|221176464|gb|EEE08893.1| squalene/phytoene synthase family protein [Burkholderia multivorans
           CGD2]
 gi|221184179|gb|EEE16579.1| squalene/phytoene synthase family protein [Burkholderia multivorans
           CGD2M]
          Length = 282

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 83/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERAAGLERWRADIDACFAGHP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R ++L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 82  -PRH--LVALEREIRAFNLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I              + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPEAEGIKL-SHHLGRALQLTNILRDIDDDAAINRCYLPRELLQREGIAISDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 198 ATIARDPALPRVCATLVERALEHFRQADAVMDTCARAQVKAPRIMSGAYRCILEAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|300022006|ref|YP_003754617.1| squalene synthase HpnD [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523827|gb|ADJ22296.1| squalene synthase HpnD [Hyphomicrobium denitrificans ATCC 51888]
          Length = 280

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 85/278 (30%), Gaps = 7/278 (2%)

Query: 18  SRDSLFVLRNLRDIDYD-RYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           S+                 Y A  + P   R ++  +Y F   +  V D       R   
Sbjct: 3   SQAQTLAHDEAPAASRSSFYAAMRMLPQEQRDAMYHVYAFCRAVDDVADNGGAREPRLAE 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FD 135
           L  ++   +              +  L + + ++ L    F+ +++    D   D    D
Sbjct: 63  LARYRADLDDFYATGRTTLR---TSYLANAITKFGLKKDDFIAVVDGMEMDIVRDIHAPD 119

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
               + Y  R +S +  L+  I   E     + +  + G A  +  ++  +      G+L
Sbjct: 120 WATLDLYCDRAASAVGRLSVPIFGIEG-ELGVDLAHHLGRALQLTNILRDIDEDATLGRL 178

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAF 254
           Y P + L   G+      +      +    +  A+    Y  ++   M            
Sbjct: 179 YLPKEALIEGGITETDIDAILAHPALDRVCRGIAQKTRNYYRRSEALMARCPRRSARSPR 238

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           +  ++   +L+     G+         ++    W +L 
Sbjct: 239 MMATVYRGILEKLITRGWHAPRADVRRSKRYVIWAVLR 276


>gi|124009312|ref|ZP_01693991.1| phytoene synthase [Microscilla marina ATCC 23134]
 gi|123985089|gb|EAY25033.1| phytoene synthase [Microscilla marina ATCC 23134]
          Length = 278

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 93/291 (31%), Gaps = 26/291 (8%)

Query: 14  EKIFSRDSLFVLRNLRD-IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + ++ + S    + + +       L         R S+  +Y F      + DT      
Sbjct: 2   KSLYDKVSYKCSKLVTNNYSTSFSLGISFLSQKIRKSVYAIYGFVRFADEIVDTFHGYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           +D+  ++ ++ +++  + +   S++P        V ++++  +     +++   D    +
Sbjct: 62  KDLLDRFKQETYQAIDEKI---SLNPILNSFQQTVNEFNIERELIDTFLKSMEMDLVGIN 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSER---YSASLRVIKYAGIAQFIGQLICQLPIH 189
             D + +E Y    +  +  +   +        Y +        G A      +  L   
Sbjct: 119 Y-DQEGYEEYILGSAEVVGLMCLRVFCEGDAAKYDSLKYGAMRLGSAFQKINFLRDLKQD 177

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           Y   G+ YFP   +   G   +               K   E   K      E ++ +  
Sbjct: 178 YKELGRTYFPGVDISEFGEINK---------------KEIEEDIEKDFRDGYEGIKGLPK 222

Query: 249 DVF-PAFIPVSITESVLKHAQN-HGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                 ++      S+ K  QN    +I+S     +   +     SS +K 
Sbjct: 223 HARFGVYMAYVYYYSLFKKIQNTPPRQIMSARIRISNRRKYMLFFSSYVKH 273


>gi|239945638|ref|ZP_04697575.1| putative squalene/phytoene synthase [Streptomyces roseosporus NRRL
           15998]
 gi|239992108|ref|ZP_04712772.1| putative squalene/phytoene synthase [Streptomyces roseosporus NRRL
           11379]
 gi|291449096|ref|ZP_06588486.1| phytoene synthase [Streptomyces roseosporus NRRL 15998]
 gi|291352043|gb|EFE78947.1| phytoene synthase [Streptomyces roseosporus NRRL 15998]
          Length = 303

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 82/289 (28%), Gaps = 20/289 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR------------ 76
           +  D +  +A    P  +R  L  +Y F   +  + D    P   D R            
Sbjct: 16  KAADENFPVAPFFLPRAWRGDLMAVYGFARLVDDIGDGDLAPGGADARHLGLEPEQSDDR 75

Query: 77  ---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L   +            E   P    L    R+  L  + FL +IEA+  D      
Sbjct: 76  LAMLDALETDLRRVFATTGEEPHHPLLRTLRPTARRRALTPEPFLGLIEANRQDQKVRRY 135

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y    ++ +  L   +  +       R       A  I + +  +     R 
Sbjct: 136 GTYAELAAYCELSANTVGRLVLALTGTTSPERVRR-SDAVCTALQIVEHLQDVAEDLERD 194

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + +    +      +      +   I   A+     L +    +  +   +   
Sbjct: 195 RIYLPAEDMERFRVTEADLAAPSAGASVRALIAYEAQRASDLLDEGPPLVGSVDGRLKLL 254

Query: 254 FI-PVSITESVLKHAQNHGFKIVSHSH---TPNQLVRPWYMLSSSIKKR 298
               V    S L      GF ++        P+ L     +L  +  +R
Sbjct: 255 LAGFVGGGRSALTAISAAGFDVLPGPPKATKPSLLREVGTVLRRARGER 303


>gi|78066714|ref|YP_369483.1| squalene/phytoene synthase [Burkholderia sp. 383]
 gi|77967459|gb|ABB08839.1| Squalene/phytoene synthase [Burkholderia sp. 383]
          Length = 303

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 86/294 (29%), Gaps = 6/294 (2%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
            + +         + D  +  +         Y A   +P   +  L+ L+    EL    
Sbjct: 15  RVPRTRPHTIPPVNFD-DYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETV 73

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
               +P     +L WW     +       +   P +  L                ++  +
Sbjct: 74  KETSDPTVGHTKLAWWHKELAALAD---GQPSHPVTKALAKHHPAIAAEADALRTLVNGY 130

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             D       D    + Y  ++      L      S   +        AG A  + Q + 
Sbjct: 131 GMDLEQARYLDLANLQRYIAQVGGTFASLVARAS-SANPADPQPWAADAGRALMLAQFVQ 189

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            L      G++Y P+D L    +     L+ + S   +  ++       + L  A   + 
Sbjct: 190 DLGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREALVAAEAAIP 249

Query: 245 YILPDV-FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                        +++  S+L   +  G++++        + + W    ++ ++
Sbjct: 250 ASERRAQRTLRAQLALAASLLDEIERDGYQVLHQRIALTPIRKLWIAWRTARRR 303


>gi|103488607|ref|YP_618168.1| squalene/phytoene synthase [Sphingopyxis alaskensis RB2256]
 gi|98978684|gb|ABF54835.1| farnesyl-diphosphate farnesyltransferase [Sphingopyxis alaskensis
           RB2256]
          Length = 327

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 88/285 (30%), Gaps = 16/285 (5%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT---------ARNPITR 73
           F   ++        LA  L     R  +  LY +      + D            +    
Sbjct: 15  FAHDSIARGSKSFALASQLFDRETRERVWLLYAWCRAADDLTDGQDHGGTMAPGHDSAAA 74

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
             R++   D          A +  P    L  ++ +  +P     D++     D+ +   
Sbjct: 75  VERIRALTDQ-----AFAGAPTGDPAFDALGFLLTEVAIPRAVIDDIVAGFDLDARDWRP 129

Query: 134 FDCKQFEHYAFRISSRLI-HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                   Y + ++  +   +A ++        +L      GIA  +  +   +      
Sbjct: 130 RSEDDLLRYCYHVAGAVGVAMALVMGIDPDDERTLDRASDLGIAFQLANIARDVAEDAAA 189

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            + Y P++ +  + +     +      R+++  K  AE+  +Y   AR   R + P    
Sbjct: 190 DRCYLPVEWMVELDIPPGQHMHPAFRPRLAVMAKWLAEMAEEYEASARWGARKLPPRSRW 249

Query: 253 AFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           A +  + I   + +  +  G     H    +   +  ++  +   
Sbjct: 250 AVLAAAGIYGDIAREVRRRGDHAWDHRAASSLAAKLGWVARAGWS 294


>gi|18143449|dbj|BAB79604.1| crtB [Pantoea agglomerans pv. milletiae]
          Length = 296

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 76/273 (27%), Gaps = 12/273 (4%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPITRDMRLQWWKD 82
                  A  L     R S+  LY +      V D           +  + + RL   + 
Sbjct: 4   GSKSFATASKLFGAKTRRSVLMLYAWCRHCDDVIDDQVLGFSNDTPSLQSAEQRLAQLEM 63

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               +  G       P       +   +D+   Y  D +     D +            Y
Sbjct: 64  KTRQAYAGSQMHE--PAFAAFQEVAMAHDILPAYAFDHLAGFAMDVHETRYQTLDDTLRY 121

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
            + ++  +  +   I+     +   R     G+A  +  +   +      G+ Y P   L
Sbjct: 122 CYHVAGVVGLMMAQIMGVRDNATLDRACD-LGLAFQLTNIARDIVEDADAGRCYLPATWL 180

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITE 261
              GL RE+    QN   +S   +   E    Y   A   +  +      A      +  
Sbjct: 181 AEEGLTRENLADPQNRQALSRVARRLVETAEPYYRSASAGLPGLPLRSAWAIATAQQVYR 240

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +         +      + +   +   ++++S
Sbjct: 241 KIGMKVVQAASQAWDQRQSTSTPEKLALLVAAS 273


>gi|167851400|ref|ZP_02476908.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei B7210]
          Length = 261

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 79/251 (31%), Gaps = 7/251 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 16  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 76  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 132 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L+ A   G
Sbjct: 191 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 250

Query: 272 FKIVSHSHTPN 282
           F          
Sbjct: 251 FAPPRAPLRKP 261


>gi|170699371|ref|ZP_02890418.1| squalene synthase HpnD [Burkholderia ambifaria IOP40-10]
 gi|170135743|gb|EDT04024.1| squalene synthase HpnD [Burkholderia ambifaria IOP40-10]
          Length = 282

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLDRWRADIDACFAGQP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R +DL  + F  MI+    D+  D    D    + +  R++S    
Sbjct: 82  -PRH--LVALEREIRAFDLKREDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGIPEAEGIA-LSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++   A   M       V    I       +L+ A   G
Sbjct: 198 ATIVRDPALPRVCATLVERALEHFRAADAVMDTCTRAQVKAPRIMSGAYRCILEAAIARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|302887779|ref|XP_003042777.1| hypothetical protein NECHADRAFT_52106 [Nectria haematococca mpVI
           77-13-4]
 gi|256723690|gb|EEU37064.1| hypothetical protein NECHADRAFT_52106 [Nectria haematococca mpVI
           77-13-4]
          Length = 570

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 81/288 (28%), Gaps = 21/288 (7%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE- 85
            L       YLA        RI L  LY F      + D A +     + ++  +   + 
Sbjct: 280 LLSKKSRSFYLASGAFEGKLRIDLIRLYAFCRAADDLVDEATSTEEATLWIERLERFLQL 339

Query: 86  ---------SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF-- 134
                         +      P    LL +   Y         +        ++      
Sbjct: 340 ASGQKSSNSELDDYVRERFPEPIQQALLQLPTDYLPSQPLHDLLKGFETDLLFSTIYPIA 399

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK--------YAGIAQFIGQLICQL 186
             +  + YA  ++  +  L   ++     S+S    +          GIA     +   +
Sbjct: 400 TTEDLDLYASHVAGTVAELCNCLILWHYSSSSSEESRSRILNGGVQMGIALQYVNMARDI 459

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            +    G++Y P   L    L+    +   +   +    +   +        AR  +  +
Sbjct: 460 AVDAGMGRVYIPSSWLQESNLEARDMVQNPSGPTVDSLRQRLLDRAFAKYELARGAIDEL 519

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            P+V  P  + V     + +  +  G+ +     T     R     S+
Sbjct: 520 PPEVRGPIRVAVESYMEIGRVLRESGYSVRDGKATVPLWRRIKVAWSA 567


>gi|161519722|ref|YP_001583149.1| squalene synthase HpnD [Burkholderia multivorans ATCC 17616]
 gi|189354097|ref|YP_001949724.1| phytoene synthase [Burkholderia multivorans ATCC 17616]
 gi|160343772|gb|ABX16857.1| squalene synthase HpnD [Burkholderia multivorans ATCC 17616]
 gi|189338119|dbj|BAG47188.1| phytoene synthase [Burkholderia multivorans ATCC 17616]
          Length = 282

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 83/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERAAGLERWRADIDACFAGHP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R +DL    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 82  -PRH--LVALEREIRAFDLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I              + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPEAEGIKL-SHHLGRALQLTNILRDIDDDAAINRCYLPRELLQREGIAISDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 198 ATIARDPALPRVCATLVERALEHFRQADAVMDTCARAQVKAPRIMSGAYRCILEAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|115359698|ref|YP_776836.1| squalene/phytoene synthase [Burkholderia ambifaria AMMD]
 gi|115284986|gb|ABI90502.1| Squalene/phytoene synthase [Burkholderia ambifaria AMMD]
          Length = 282

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLDRWRADIDACFAGQP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R +DL  + F  MI+    D+  D    D    + +  R++S    
Sbjct: 82  -PRH--LVALEREIRAFDLKREDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGIPEAQGIA-LSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++   A   M       V    I       +L+ A   G
Sbjct: 198 ATIVRDPALPRVCATLVERALEHFRAADAVMDTCTRAQVKAPRIMSGAYRCILEAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|221198228|ref|ZP_03571274.1| squalene synthase HpnD [Burkholderia multivorans CGD2M]
 gi|221209190|ref|ZP_03582182.1| squalene synthase HpnD [Burkholderia multivorans CGD2]
 gi|221170928|gb|EEE03383.1| squalene synthase HpnD [Burkholderia multivorans CGD2]
 gi|221182160|gb|EEE14561.1| squalene synthase HpnD [Burkholderia multivorans CGD2M]
          Length = 277

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 81/277 (29%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 5   DYCQQKAAPAGSSVYYALRQAPAAVEPRLTALFALRRELEETVKEISDPTVGHTKLAWWH 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 65  KELAALAN---GQPSHPVTQALARHHPSIAAEADALRTLVNGYGMDLEQARYLDFANLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++             + +  A        G A  + Q + +L      G++Y P+D 
Sbjct: 122 YVAQVGGT-FAALVARAAAAQPGAPQPWAADVGRALMLAQFVQELGNDARHGRIYLPIDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              V++ 
Sbjct: 181 LQRYNVTAADLLNRRYSPAFTELMQFQTARAREALDAADAAIPAAERRAQRTLRAQVALA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 241 RALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 277


>gi|118594790|ref|ZP_01552137.1| Squalene/phytoene synthase [Methylophilales bacterium HTCC2181]
 gi|118440568|gb|EAV47195.1| Squalene/phytoene synthase [Methylophilales bacterium HTCC2181]
          Length = 279

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 31/271 (11%), Positives = 92/271 (33%), Gaps = 7/271 (2%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFES 86
           ++    +  +A +L P   R +   LY F  +   + D    N   R  +LQ++K+  +S
Sbjct: 13  VKKHYENFPVASMLFPKKQREAAIILYQFARKCDDIADEGTWNSSQRTAQLQYYKEGLDS 72

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                  +   P  V++  +  +++L       ++ A   D   D      +   Y  + 
Sbjct: 73  I----NTKPSVPLFVDIKQVCHEFNLQLGLLYQLMTAFEQDIAKDRYHTMSEVIDYCNKA 128

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +     +   +   ++   ++ +  +  IA  +  ++  +   + + ++Y P +      
Sbjct: 129 ACPAGEMILTLF-GKQNKTTISLSNHLCIALAMIGMLQDIHEDFLKNRIYIPQEYFKRFN 187

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL-K 265
           +        + + R S     +  +   ++        ++   +      +     +L  
Sbjct: 188 VTEAEIHRKEFTPRWSNLKDAWLTIIDHHIDSGESLKHHLTGRLKLQIKVLIGASRLLSS 247

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +     +   S T ++      +  + I+
Sbjct: 248 RMKLSKDNLFVKSPTLSKWDWGILLFKAIIR 278


>gi|221210499|ref|ZP_03583479.1| squalene/phytoene synthase family protein [Burkholderia multivorans
           CGD1]
 gi|221169455|gb|EEE01922.1| squalene/phytoene synthase family protein [Burkholderia multivorans
           CGD1]
          Length = 282

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 83/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERAAGLERWRADIDACFAGHP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  + L   +R +DL    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 82  -PRH--LIALEREIRAFDLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I              + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPEAEGIKL-SHHLGRALQLTNILRDIDDDAAINRCYLPRELLQREGIAISDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++  +A   M       V    I       +L+ A   G
Sbjct: 198 TTIARDPALPRVCATLVERALEHFRQADAVMDTCARAQVKAPRIMSGAYRCILEAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|319953966|ref|YP_004165233.1| phytoene synthase [Cellulophaga algicola DSM 14237]
 gi|319422626|gb|ADV49735.1| Phytoene synthase [Cellulophaga algicola DSM 14237]
          Length = 279

 Score =  139 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 84/292 (28%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + IF + S    + +         LA  +     R  +  +Y F      + DT  +   
Sbjct: 2   KSIFDQVSYSCSKTVTESYSTSFSLATKMLHTSIRGDIYNIYGFVRFADEIVDTFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           + +  ++  D+ ++    +   S++P           Y++P       +++   D Y   
Sbjct: 62  KLLFDKFENDLKDAIEHKI---SLNPILNSFQHTYHTYNIPYHLVASFMKSMRMDLYKTV 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                +++ Y +  +  +  +   +    + E Y +        G A      +  L   
Sbjct: 119 YKTDAEYKEYIYGSADVVGLMCLKVFVQGNEESYESLKISAMALGSAFQKVNFLRDLKDD 178

Query: 190 YH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L       +     +  D I                   E +  +  
Sbjct: 179 FEGLNRTYFPNTNLKQ----LDEVSKKRIVDEIKA-----------DFQLGYEGIERLPH 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
              F  +        +L   Q     +I +         +   +  S +  +
Sbjct: 224 TAKFGVYTAYKYYSRLLTKLQRTPPLEIQNARIRVPNYEKFGLLAKSYVNYK 275


>gi|134292518|ref|YP_001116254.1| squalene/phytoene synthase [Burkholderia vietnamiensis G4]
 gi|134135675|gb|ABO56789.1| Squalene/phytoene synthase [Burkholderia vietnamiensis G4]
          Length = 286

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 82/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 27  SFYLAMRILPAAQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLDRWRADIDACFAGQP- 85

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R +DL  + F  MI+    D+  D    D    + +  R++S    
Sbjct: 86  -PRH--LVALEREIRAFDLRREDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 142

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 143 LSVRIFGIPEAEGIE-LSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 201

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +   A   M       V    I       +L+ A   G
Sbjct: 202 ATIVRDPALPRVCATLVERALAHFRAADAVMDTCTRAQVKAPRIMSGAYRCILEAAIARG 261

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 262 FAYPRAPLRKPKARMLMIAARYAL 285


>gi|239815488|ref|YP_002944398.1| squalene synthase HpnC [Variovorax paradoxus S110]
 gi|239802065|gb|ACS19132.1| squalene synthase HpnC [Variovorax paradoxus S110]
          Length = 285

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 85/276 (30%), Gaps = 15/276 (5%)

Query: 37  LACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIAES 95
           +A  L PP  R  ++ +Y+F      + D    +P  R   L+ +++   ++  G +A S
Sbjct: 1   MASWLCPPHLRPPIAAIYHFARTADDIADEGDASPGQRLADLRAYREELAAAAHGEVAPS 60

Query: 96  ISP--FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----IFDCKQFEHYAFRISSR 149
                    L   + Q+ LP Q   D++ A   D           D  +   Y  R ++ 
Sbjct: 61  SRWPQVFGPLAHSIAQFKLPEQLLADLLSAFMQDIEKTRDGGTYADRAELLDYCRRSANP 120

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           +  L   +       A          A  +        +   RG+ Y PL      GL R
Sbjct: 121 VGRLLLHLYGVNDAQALA-QSDAICSALQLINFWQDPSVDLPRGRFYPPLADCARRGLTR 179

Query: 210 ES------FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
           ES                   I + +    + + +    +  +          V      
Sbjct: 180 ESFKVFMPLAGAPPPQEAINLIAVESAWARELMAEGAPLVHRLPGRAGWELRFVVQGGLR 239

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +L   ++ GF   S      +   P     +   +R
Sbjct: 240 ILDKIEDLGFDTFSQRPKIGKADAPLLAWRALRMRR 275


>gi|326386879|ref|ZP_08208494.1| squalene synthase HpnD [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208682|gb|EGD59484.1| squalene synthase HpnD [Novosphingobium nitrogenifigens DSM 19370]
          Length = 276

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 93/267 (34%), Gaps = 8/267 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-RLQWWKDIFESSTKGLI 92
             Y    + P   R ++  +Y F   +  + D  +      M  L  W+   +S   G  
Sbjct: 15  SFYAGMRVLPKAEREAMYAVYGFCRIVDDIADDQQGHRDARMAELDAWRHDLDSLYAGGA 74

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLI 151
               +  +      VR++ L    F  +I+    D  +D       + + Y  R++S + 
Sbjct: 75  PGRAALVADA----VRRFGLERADFEAVIDGMATDVDHDVRWPTWDELDLYCDRVASAVG 130

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
            L+  +   +R +A L +  + G A     ++  +      G++Y P + L   G+   +
Sbjct: 131 RLSVRVFGMDR-AAGLALAHHLGRALQFTNILRDIDEDAAIGRVYLPAEALTEAGIALTT 189

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHAQNH 270
                   RI    +  A    ++  +A   +       +    +  ++   +L+     
Sbjct: 190 PREVAADPRIDAVARQVAVRAQEHFRQAHAVLAARPRGHLIAPRLMDAVYARILQQMLQV 249

Query: 271 GFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           G+         N+L+    +L   +K 
Sbjct: 250 GWAPPRRRIKTNKLLLVATVLWLLVKN 276


>gi|332112676|gb|EGJ12469.1| putative terpenoid synthase-like protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 276

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 4/271 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMRLQWWKDIFESST 88
           D   +  +A +L PP  R ++  +Y+F      + D    P   R   L  ++   E+  
Sbjct: 4   DHYENFPVASVLCPPTIRPAVVAVYHFARTADDIADEGDAPAAQRHADLAAYRADLEAVV 63

Query: 89  KGL-IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
           +G    E  +   V L + + +Y LP  +   +++A   D  N    D +Q   Y  R +
Sbjct: 64  RGCAPGERWARVFVPLAAALERYALPPVWLHRLLDAFEQDVDNPVYADRQQILAYCRRSA 123

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
             +  L   +       +  R          +      L +   R ++Y P D L A GL
Sbjct: 124 DPVGRLLLHLYGVRDAESERR-SDAVCTGLQLANFWQDLGVDAGRRRVYLPQDELAAAGL 182

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKH 266
             +  L+ ++S  +   ++         L +       +          V+     VL+ 
Sbjct: 183 TMDDVLARRDSPALRRLVRELCAWAESLLREGAPLALDVPGRAGWELRLVAQGGLRVLEK 242

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                   +S   T      P  +  ++  +
Sbjct: 243 IGRMDHATMSARPTIGAADLPALLWRAATMR 273


>gi|167584989|ref|ZP_02377377.1| squalene synthase HpnD [Burkholderia ubonensis Bu]
          Length = 282

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D+      R   L+ W+   ++   G   
Sbjct: 23  SFYLAMRILPATQRDAMFQVYAFCRAVDDIADSDLPRAERAAGLERWRADIDACFAGRP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                    L   +  ++L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 82  -PRH--LAALTREIHAFNLQRDDFHAMIDGMAMDAAEDICAPDEPTLDLYCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGMPEAEGIA-LSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAITDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +   +  +        E  +++  +A   M       V    I       +L  A   G
Sbjct: 198 ATIARAPALPRVCATLVERAIEHFRQADAVMDKCARAQVKAPRIMSGAYRCILDAAVARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FDAPRLPIRKPKARMLMIAARYAL 281


>gi|308807148|ref|XP_003080885.1| Phytoene/squalene synthetase (ISS) [Ostreococcus tauri]
 gi|116059346|emb|CAL55053.1| Phytoene/squalene synthetase (ISS) [Ostreococcus tauri]
          Length = 437

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 87/287 (30%), Gaps = 6/287 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                   +  +R  DY+ YL  L  P     +   +   + E   +  +A +      R
Sbjct: 26  LRAALRHCVEVVRARDYETYLCTLALPRALAPAAFAIRALNCETGSIVGSASSSDAAVAR 85

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQ--YFLDMIEAHFFDSYNDSIF 134
           L WW D      +G       P +  + + +          +   M+EA   D+  D   
Sbjct: 86  LMWWSDALVGDDEGPGGTPAHPVARAVAATLGPEPSARARTWLKRMVEARIRDAREDGPP 145

Query: 135 D-CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                 E YA       + LA          A      + G A  +  L+     H  + 
Sbjct: 146 REIIDLERYASDAHGSAMTLALDACGIRNTDA-DHAASHLGKAIGLSALLRGTTAHSRQR 204

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           + Y P+D+    G+  ES    + S+ +  A    A     +L  AR     +  +  P 
Sbjct: 205 RCYLPIDVCARHGVSTESVYRMEPSEGVRSAAHEVACAAKAHLDSARAMTERVPKEAKPF 264

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPN--QLVRPWYMLSSSIKKR 298
           F+        L   +   F +   +       L     +   + +  
Sbjct: 265 FLQAVTVGRYLDALEARDFDVFDETVAKGGAPLATQGAIAWHAFRGT 311


>gi|172064515|ref|YP_001812166.1| squalene synthase HpnD [Burkholderia ambifaria MC40-6]
 gi|171997032|gb|ACB67950.1| squalene synthase HpnD [Burkholderia ambifaria MC40-6]
          Length = 282

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 84/264 (31%), Gaps = 7/264 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   G   
Sbjct: 23  SFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLDRWRADIDACFAGQP- 81

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
                  V L   +R +DL  + F  MI+    D+  D    D    + +  R++S    
Sbjct: 82  -PRH--LVALEREIRAFDLKREDFHAMIDGMAMDAAEDICAPDEPTLDLFCDRVASAAGR 138

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 139 LSVRIFGIPEAQGIA-LSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIIDP 197

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L++   A   M       V    I       +L+ A   G
Sbjct: 198 ATIVRDPALPRVCATLVERALEHFRAADAVMDTCTRAQVKAPRIMSGAYRCILEAAIARG 257

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSI 295
           F          +          ++
Sbjct: 258 FAAPRAPLRKPKARMLMIAARYAL 281


>gi|305666131|ref|YP_003862418.1| phytoene synthetase [Maribacter sp. HTCC2170]
 gi|88707628|gb|EAQ99869.1| phytoene synthetase [Maribacter sp. HTCC2170]
          Length = 278

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 94/292 (32%), Gaps = 26/292 (8%)

Query: 14  EKIFSRDSLFVLRNLR-DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           +K+F   S    + +             +  P  R ++  +Y F      + DT      
Sbjct: 2   KKLFDDSSYSCSKLVTNTYSTSFSSGIKMFAPSIRPAIYAIYGFVRYADEIVDTFNEYD- 60

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L + +   + +       S++P       IV  YDL + Y  D + +   D Y   
Sbjct: 61  --QELLFNEFKEDYNKAIERRISLNPILNAFQEIVHNYDL-HPYVEDFLGSMESDLYKKE 117

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
               + F  Y +  +  +  +   +    D + ++A        G A      +  +   
Sbjct: 118 YSSKQDFVKYIYGSADVVGLMCLRVFVNNDDDAFNALKNSAMRLGSAFQKINFLRDIKDD 177

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
               G+ YFP            +  +G+ ++          +   + L  AR+ +  +  
Sbjct: 178 TENLGRSYFP------------NLYNGELTNENK---FEIIKDIEEDLKHARKGIIQLPL 222

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKR 298
           +     ++     + +L+  +      I++     +  ++   +  + ++ +
Sbjct: 223 EAKLGVYLAYRYFDRLLRKLKRLDCDRIMNERIRISDPMKLVLLTRTYVRYK 274


>gi|298206773|ref|YP_003714952.1| phytoene synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849405|gb|EAP87273.1| phytoene synthetase [Croceibacter atlanticus HTCC2559]
          Length = 279

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 87/292 (29%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNLR-DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + IF   S    + +         LA  L  P  R  +  +Y F      + D+  N   
Sbjct: 2   KSIFDTVSRDCSKAVTNSYSTSFSLASKLLAPSIRQDVYNVYGFVRFADEIVDSFHNYD- 60

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           ++  L  +++  + + +  I  S++P        V ++++  ++++  + +   D Y   
Sbjct: 61  KETLLNDFEEDLKKAVRDKI--SLNPILNSFQETVHKFNIEEEFYMSFLRSMRLDLYKSK 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY---AGIAQFIGQLICQLPIH 189
               +++E Y +  +  +  +   +           + +     G A      +  L   
Sbjct: 119 YLTKEEYEDYIYGSADVVGLMCLKVFVKGDQQKFDDLKEDAMKLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
                + YFP   L  +  +                 K   E            ++ +  
Sbjct: 179 LEDLNRSYFPNTNLQKLDENS---------------KKRIIEEIELDFKAGLNGIQRLPV 223

Query: 249 DVF-PAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +     +        +L   +     +I +         +   M  S +  R
Sbjct: 224 EAKLGVYTAYVYYLRLLHKLKKTPSLEIRNKRIRVPNYEKAGLMAKSYVTCR 275


>gi|23013300|ref|ZP_00053211.1| COG1562: Phytoene/squalene synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 280

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 6/280 (2%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
                R + + D DR+   L +PP  R SL  LY F+ E+ +V+++ R P+   +RLQWW
Sbjct: 6   LSHAARQVFEFDRDRFATALFAPPDRRESLMLLYAFNLEIAKVQESVREPMAGMIRLQWW 65

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +D   S  +G   +   P +  L  ++R++DLP Q F D+I A   D    +  D  + E
Sbjct: 66  RDTLISGAEGGTCD-NHPIARPLAELIRRHDLPLQAFDDLISARQDDLEGFAPADMAEAE 124

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R S+ L  LA  +          R   + G A  +   +  L  H   G+L  P  
Sbjct: 125 RYVQRSSAALTQLALAV-LGGTSEEIRRAGDHVGTAWGMIGNLRALGHHLSMGKLTLPEG 183

Query: 201 ILGAVGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
           +LG  G   E  L+G+ S + ++ A+++  E    +L +AR+           A +P  +
Sbjct: 184 LLGQYGSRGEEVLAGRASMEALTAAVQVMGERARHHLSEARKFKAG--RQGLAALLPAIL 241

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +  L+  +  G+              P  ++ + +  RF
Sbjct: 242 ADGYLQVIEKSGWNPFDSRVPRPNPR-PIRLVIAHLMGRF 280


>gi|237812707|ref|YP_002897158.1| squalene synthase HpnD [Burkholderia pseudomallei MSHR346]
 gi|237503481|gb|ACQ95799.1| squalene synthase HpnD [Burkholderia pseudomallei MSHR346]
          Length = 280

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 84/279 (30%), Gaps = 6/279 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALA---SGHPSHPVSQALAAHHPDIARETDALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLATMILDS--ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           YA +       L      S     +   R  +  G A  + Q +  L     +G++Y P+
Sbjct: 122 YADQTGGMFAALVASASASAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVPI 181

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVS 258
           D L   G+     L+ + S   +  ++         L  +   +               +
Sbjct: 182 DELQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALGA 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +  +VL   +  GF+++        + + W    ++ ++
Sbjct: 242 LALAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 280


>gi|315050384|ref|XP_003174566.1| phytoene synthase [Arthroderma gypseum CBS 118893]
 gi|311339881|gb|EFQ99083.1| phytoene synthase [Arthroderma gypseum CBS 118893]
          Length = 594

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 99/319 (31%), Gaps = 27/319 (8%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           ++     ++R  +    ++    +  L+      YL   +     R+ L  LY F  +  
Sbjct: 274 LITLFLTSSRLYDTNVLQEMSQAVTLLKQKSQSMYLGSAMFEGQLRLDLIALYSFCRKAD 333

Query: 62  RVRDTARNPITR-----------DMRLQWWKDIFESSTKGLIAESISPF-SVELLSIVRQ 109
            + D A +  T            ++R +  +   + +    +     P        ++  
Sbjct: 334 DLIDDAPDRETAKYWIEQCEKALELRFKLKETALDDTEAYQLLTKSIPQPLHAAAHLLPA 393

Query: 110 YDLPNQYFLDMIEAHFFDSYNDS------IFDCKQFEHYAFRISSRLIHLATMILDSERY 163
             LP +    +++    D   D       I      E YA+ ++  +  L   ++     
Sbjct: 394 SRLPKEPLSCLLQGFEIDLKFDFEKGSFPIATEHDLEVYAYHVAGTVASLLLELVFRHHP 453

Query: 164 SASLRVIKY--------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSG 215
            +     +          G A     +   +      G++Y P   L   GL     +S 
Sbjct: 454 VSISEAERLRVISAGEVMGRALQYTNIARDITRDAEIGRVYIPSSWLAEEGLTPSMVISH 513

Query: 216 QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKI 274
             + ++    +   E   K   + +E +  +  +V  P    V+    + +  + +  KI
Sbjct: 514 PRNSKLIPLRRRILEKADKCYCETQEAISKLPSNVQGPVRATVTAYMEIGQVIRENETKI 573

Query: 275 VSHSHTPNQLVRPWYMLSS 293
            +     ++  R      +
Sbjct: 574 WNGKLKVSRWRRFKRAWLA 592


>gi|303289038|ref|XP_003063807.1| phytoene synthase [Micromonas pusilla CCMP1545]
 gi|226454875|gb|EEH52180.1| phytoene synthase [Micromonas pusilla CCMP1545]
          Length = 356

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 90/288 (31%), Gaps = 27/288 (9%)

Query: 35  RYLACLLSPPLYRISLSFLYYFHTELMRVRD--TARNPITRDMRLQWWKDIFESSTKGLI 92
            Y A  L  P  R  +  +Y +   L  V D    R+P      L   +    +      
Sbjct: 71  FYFATALMRPTQRERVRAIYAWCRALDEVVDGAETRSPADARRELDAIERRLRALFDDDD 130

Query: 93  AESISP-------------FSVELLSIVRQY-DLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
               +               ++ L   +R    +  + FLDMI     D           
Sbjct: 131 GGDGASSPPSSSGSSSSSPETIALADTIRATDGMSPEPFLDMIAGMRSDLPAAVPSSGAF 190

Query: 139 FEHYAFRISSRLIHLATMILDSERY---SASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
           +  Y + ++  +  +   ++          ++      GIA  +  ++  +     RG+L
Sbjct: 191 YTLYCYDVAGTVGLMTLPVMGVAEGYGLDDAIPPGVELGIALQLVNVLRDVGEDAKRGRL 250

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAF 254
           Y PLD + A GL  E  LSG     ++            +  +AR  ++ + P    P  
Sbjct: 251 YLPLDAVHAAGLTAEEILSGAV---VNAVDGSVDARAEAHFARARVGIKMLPPAARLPVT 307

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP----WYMLSSSIKKR 298
               I  ++L   + +G+  ++         +          +    R
Sbjct: 308 AAGEIYGALLNKVRANGYDNITRRAYTTTGEKLRALPGLAARAWFGSR 355


>gi|163788655|ref|ZP_02183100.1| phytoene synthase [Flavobacteriales bacterium ALC-1]
 gi|159875892|gb|EDP69951.1| phytoene synthase [Flavobacteriales bacterium ALC-1]
          Length = 279

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 31/290 (10%), Positives = 76/290 (26%), Gaps = 25/290 (8%)

Query: 14  EKIFSRDSLFVLRNLR-DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S    + +         +A  +   + R  +  +Y F      + DT  +   
Sbjct: 2   KSLFDNVSKECSKLVTNAYSTSFSMATKMLSDVIRQDIYNIYGFVRFADEIVDTFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +   +     +     +   S++P          +Y +        + +   D +   
Sbjct: 62  EKL---FKNFEADLEAALIDKISLNPILNSFQETYHKYGIDKHLVDSFMNSMRLDLHKKD 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSER---YSASLRVIKYAGIAQFIGQLICQLPIH 189
               +++  Y +  +  +  +   I        Y          G A      +  L   
Sbjct: 119 YLTEEEYRAYIYGSADVVGLMCLKIFVKGDKVKYEDLKESAMSLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L  +    +                           K  + ++ +  
Sbjct: 179 FEDLSRTYFPNTDLNQLDEPSKQ---------------AIISDIEADFAKGLDGIKRLPI 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIK 296
           +  F  F+       +L   +     KI S         +   +  S +K
Sbjct: 224 EAKFGVFMAYRYYNKLLDKLKKTPALKIKSTRIRVPNYKKVELLTRSYVK 273


>gi|134295964|ref|YP_001119699.1| squalene/phytoene synthase [Burkholderia vietnamiensis G4]
 gi|134139121|gb|ABO54864.1| Squalene/phytoene synthase [Burkholderia vietnamiensis G4]
          Length = 301

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 77/277 (27%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +            Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 29  DYCQHKAAPAGSSVYYALRQAPRATEPRLTALFALRRELEETVKEISDPTVGHTKLAWWH 88

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P +  L                ++     D       D    + 
Sbjct: 89  KELAALAA---GAPTHPVTKSLAQHHPTIAAEADALRTLVNGFGMDLEQARYLDFANLQR 145

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      +   +        AG A  + Q + +L      G++Y P+D 
Sbjct: 146 YIAQVGGAFASLVARAS-AANPADPQSWAADAGHALMLAQFVQELGNDARHGRIYLPIDE 204

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++         L  A   +              +++ 
Sbjct: 205 LQRYNVTAADLLNRRYSPAFTELLQFQTSRARAALTAADAAIPAAERRAQRTLRAQIALA 264

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ + 
Sbjct: 265 GALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRH 301


>gi|327540995|gb|EGF27551.1| squalene synthase HpnC [Rhodopirellula baltica WH47]
          Length = 319

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 92/291 (31%), Gaps = 10/291 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYL-ACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
            +          +    + +L A  L P   R     LY F      + D +  P     
Sbjct: 21  LADSRAECRAIAKA-SRENFLVATCLLPRGVRQPFYDLYAFCRTADDLADESGTPEKAVQ 79

Query: 76  RLQWWKDIFESSTKGLIAESISP-FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
            L  ++    +       +       V L   V ++ +P Q   D+++A   D       
Sbjct: 80  ALAEYRQTVAAMYSAERQDGQIAGIFVALTDTVHRFSIPRQLLDDLLDAFVQDQSIVRYR 139

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
           D +Q   Y  R ++ +  +   + D++     L +      A  +      +      G+
Sbjct: 140 DEEQLLDYCRRSANPVGRMILRLADADSDENVL-LSDDICTALQLVNFWQDVSRDRLIGR 198

Query: 195 LYFPLDILGAVGLDRESFLSGQNS-----DRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           +Y P  I+   G + ++   G +S       +  AIK   E   +   +    +  +   
Sbjct: 199 VYLPESIMHRYGFEEDTIRRGLDSGQTTPSEVREAIKFLCERTRERFHRGVPLVDRVPGW 258

Query: 250 VFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +     + V    + +   +   F ++       +  +   +  +  ++ +
Sbjct: 259 LSADLKLFVEGGLATVDAIEAIDFDVLRVRPVVRRSTQLRLLGRAMWQRFW 309


>gi|78060870|ref|YP_370778.1| squalene/phytoene synthase [Burkholderia sp. 383]
 gi|77968755|gb|ABB10134.1| Squalene/phytoene synthase [Burkholderia sp. 383]
          Length = 282

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 82/268 (30%), Gaps = 7/268 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
                 YLA  + P + R ++  +Y F   +  + D+      R+  L  W+   ++   
Sbjct: 19  TSSSSFYLAMRILPAVQRDAMFQVYAFCRAVDDIADSDLPRAERNAGLDRWRADIDACFA 78

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISS 148
           G            L   +R ++L    F  MI+    D+  D    D    + +  R++S
Sbjct: 79  GRP--PRH--LAALDREIRAFNLQRDDFHAMIDGMAMDAVEDICAPDEPTLDLFCDRVAS 134

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
               L+  I              + G A  +  ++  +       + Y P ++L   G+ 
Sbjct: 135 AAGRLSVRIFGMPEAEGIKL-SHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIA 193

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHA 267
                +      +        E  L++  +A   M       V    I       +L+ A
Sbjct: 194 ITDPATIVRDPALPRVCATLVERALEHFRQADAVMDSCARAQVKAPRIMSGAYRCILEAA 253

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              GF          +          ++
Sbjct: 254 IARGFAFPRAPLRKPKARMLMIAARYAL 281


>gi|257056315|ref|YP_003134147.1| squalene synthase HpnC [Saccharomonospora viridis DSM 43017]
 gi|256586187|gb|ACU97320.1| squalene synthase HpnC [Saccharomonospora viridis DSM 43017]
          Length = 300

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 89/265 (33%), Gaps = 6/265 (2%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           +R    +  +A  + PP YR  L  LY F   +  + D    P  R ++L       +  
Sbjct: 32  VRARQENFPVALHVLPPRYRRHLLTLYAFARMVDDIGD--AAPGDRLLQLDRISAELDRM 89

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
             G   +   P    L   V + +LP      ++EA+  D          +   Y    +
Sbjct: 90  YAGRTGD--DPLFQRLAYTVSECELPQSELERLVEANRRDQVVHRYRTFDELLDYCALSA 147

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           + +  L   +           +      A  + +    +      G++Y P   L   G+
Sbjct: 148 NPVGRLVLRVFGVST-ERRAHLSDRICSALQVLEHCQDVAEDACAGRIYLPRHDLDRFGV 206

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESVLKH 266
             E  ++ Q S  +   + +  +  ++ L +    +  +      A    V+   +  + 
Sbjct: 207 VEEDLMAAQASTGVRAVVALQVQRAVRLLDEGGPLVDDLRGAARLAVAGYVAGGRATARA 266

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYML 291
             + GF +++ +  P +      +L
Sbjct: 267 LVDAGFDVLARTPRPRKSHMLCSLL 291


>gi|330817284|ref|YP_004360989.1| Phytoene synthase, putative [Burkholderia gladioli BSR3]
 gi|327369677|gb|AEA61033.1| Phytoene synthase, putative [Burkholderia gladioli BSR3]
          Length = 279

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 83/278 (29%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   + +LS L+    EL         P     +L WW+
Sbjct: 5   DYCQQKAAPPGSSVYYALRQAPLASQGALSALFALRRELEETTRETSEPTIGQTKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +  +    +   P S  L          +     + +    D       D      
Sbjct: 65  KELAALAE---GQPSHPVSQALARHAGAIARDHAALQALADGFAMDLEQARYLDWPNLRR 121

Query: 142 YAFRISSRL-IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
           Y  R+       +A           +       G    + Q++ ++      G++Y P+D
Sbjct: 122 YVERVGGGFAGLVARAAAGPVIADTTPAWAASLGEGLQLAQIVEEVGDDARHGRVYLPID 181

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSI 259
            L    +     +  + S   S  ++  A    + L  A E +               ++
Sbjct: 182 ELQRYEVTAADLMHRRYSPAFSELMRFQATRARETLHAALEAIPSAERRAQRSLRALAAL 241

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           + + L   +   ++++    +   + + W    ++ ++
Sbjct: 242 SLATLDEIEGEDYQVLHQRISLTPIRKLWVAWRAARRR 279


>gi|154248232|ref|YP_001419190.1| squalene/phytoene synthase [Xanthobacter autotrophicus Py2]
 gi|154162317|gb|ABS69533.1| squalene/phytoene synthase [Xanthobacter autotrophicus Py2]
          Length = 276

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 5/266 (1%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           +R  D DR+LA L +P   R  L  LY F+ ++ RVR+  R  +  ++RL WW+++ E  
Sbjct: 1   MRAQDRDRFLAALFAPEDKRRHLFALYAFNLDVARVREVVREALPGEVRLAWWREVIEGE 60

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
            +G +     P +  LL     + LP      +++A  FD Y+D +      E YA   +
Sbjct: 61  GRGEVE--GHPVAAALLDTTECFALPRASLTALVDARIFDLYDDPMPTVADLEGYAGETA 118

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           + L+ L+ ++L  +  + +  +  + G+A  +  L+   PIH  RGQ Y PLD+L   G+
Sbjct: 119 AALLQLSALVLSPQASAGAGDLSGHGGVAIAMTGLMRAFPIHAARGQCYLPLDLLARHGI 178

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLK 265
            RE  +SG+ S  +  A+  F  +   +L  AR    ++ P       ++P+++    LK
Sbjct: 179 GREEAVSGKVSPPLLAALAEFRGMAAGHLAAARGAAEHLDPSAAIAAPYLPLALVAGDLK 238

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYML 291
                     S     +   R + + 
Sbjct: 239 ALARVS-DPFSAVAGLSPFRRQFALW 263


>gi|119612141|gb|EAW91735.1| chromosome 8 open reading frame 38, isoform CRA_c [Homo sapiens]
 gi|119612143|gb|EAW91737.1| chromosome 8 open reading frame 38, isoform CRA_c [Homo sapiens]
          Length = 222

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 3/225 (1%)

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           MR+Q+WK   E            P ++EL   V++++L  ++ + +++    +  + +  
Sbjct: 1   MRMQFWKKTVEDIYCDNP--PHQPVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYR 58

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
           + K+ E+YA    S L++L   IL  +   A      + G AQ I   +   P H  R +
Sbjct: 59  NIKELENYAENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQGIVTCLRATPYHGSRRK 117

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           ++ P+DI    G+ +E FL       +   I   A     +L  AR   + +    FPAF
Sbjct: 118 VFLPMDICMLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAF 177

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +     E  LK  Q   F I   S      + P Y+   S +K +
Sbjct: 178 LQTVSLEDFLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY 222


>gi|72536063|gb|AAZ73131.1| phytoene synthase [Enterobacteriaceae bacterium DC260]
          Length = 309

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 77/278 (27%), Gaps = 12/278 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--------RNPITRDMRL 77
           + +         A  L     R S   LY +      V D                  R+
Sbjct: 12  QTMAVGSKSFATAAKLFDAPTRRSTLMLYAWCRHCDDVIDGQTLGEGGTQHAVEDAQARM 71

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           Q      E+      A    P       +   + LP Q   D +E    D+ N+      
Sbjct: 72  Q--HLQIETRRAYSGAHMDEPAFRAFQEVAIIHQLPQQLAFDHLEGFAMDARNEHYASFD 129

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
               Y + ++  +  +   ++      A L      G+A  +  +   +      G+ Y 
Sbjct: 130 DTLRYCYHVAGVVGLMMARVMGVRD-EAVLDHACDLGLAFQLTNIARDIVEDAENGRCYL 188

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P   L   GL  ++  + Q+   ++            Y   AR  +  +      A    
Sbjct: 189 PQSWLDQAGLRADTLTAPQHRAALASLAARLVAEAEPYYHSARSGLPGLPLRSAWAIATA 248

Query: 258 S-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             +   +    Q+ G          ++  +   ++  +
Sbjct: 249 RGVYREIGVKVQHAGVHAWDSRQRTSKGEKLALLVKGA 286


>gi|254252147|ref|ZP_04945465.1| Squalene/phytoene synthase [Burkholderia dolosa AUO158]
 gi|124894756|gb|EAY68636.1| Squalene/phytoene synthase [Burkholderia dolosa AUO158]
          Length = 302

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 81/277 (29%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    EL        +P     +L WW 
Sbjct: 30  DYCQQKAAPDGSSAYYALRQAPAAVQPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 89

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +  +    +   P +  L                ++  +  D       D    + 
Sbjct: 90  KELAALAE---GQPSHPVTKALAQHHPSIRAETDALRALVNGYGMDLEQARYLDFANLQR 146

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   +             +   +         G A  + Q + +L      G++Y P+D 
Sbjct: 147 YIALVGGT-FAALVARASAANAADPQPWAADVGRALMLAQFVQELGNDARHGRIYLPIDE 205

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 206 LQRYNVTAADLLNRRYSPAFTELLQFQTARAREALAAADAAIPASERRSQRTLRAQIALA 265

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            S+L   +  G++++        + + W    ++ ++
Sbjct: 266 ASLLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 302


>gi|167821603|ref|ZP_02453283.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 91]
          Length = 258

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 79/248 (31%), Gaps = 7/248 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 16  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 76  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 132 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L+ A   G
Sbjct: 191 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILEAAVARG 250

Query: 272 FKIVSHSH 279
           F       
Sbjct: 251 FAPPRAPL 258


>gi|167919423|ref|ZP_02506514.1| putative phytoene synthase [Burkholderia pseudomallei BCC215]
          Length = 280

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 83/279 (29%), Gaps = 6/279 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALA---SGHPSHPVSQALAAHHPDIARETDALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHL--ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           YA +       L  +         +   R  +  G A  + Q +  L     +G++Y P+
Sbjct: 122 YADQTGGMFAALVASASAGAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVPI 181

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVS 258
           D L   G+     L+ + S   +  ++         L  +   +               +
Sbjct: 182 DELQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALGA 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +  +VL   +   F+++        + + W    ++ ++
Sbjct: 242 LALAVLDEIERDCFQVLHQRIALTPIRKLWIAWRAARRR 280


>gi|47531118|gb|AAT35222.1| fusion of carotene synthesis proteins [synthetic construct]
          Length = 1798

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 82/277 (29%), Gaps = 13/277 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQW 79
             +         A  L PP  R     LY +      V D                RL  
Sbjct: 10  EAITQGSQSFATAAKLMPPGIRDDTVMLYAWCRHADDVIDGQALGSRPEAVNDPQARLDG 69

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
            +   ++         ++P    L ++ R++D P  + +D+IE    D            
Sbjct: 70  LRA--DTLAALQGDGPVTPPFAALRAVARRHDFPQAWPMDLIEGFAIDVEARDYRTLDDV 127

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y++ ++  L  +   ++    +    R     G+A  +  +   +  +   G+ Y P 
Sbjct: 128 LEYSYHVAGILGVMMARVMGVRDHPVLDRACD-LGLAFQLTHIARDVIDYARIGRCYLPG 186

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVS 258
           D L   G   +       S  +   I    +    Y   AR  +  + P   +       
Sbjct: 187 DWLDHAGARVD---GPVPSPELYTVILRLLDAAEPYYPSARVGLADLPPRCAWSIPAAFR 243

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           I  ++    +  G +      + ++  +   +     
Sbjct: 244 IYRAIGLPIRKGGPEAYRQRISTSKAAKIGLLGIGGW 280


>gi|312113467|ref|YP_004011063.1| Squalene/phytoene synthase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218596|gb|ADP69964.1| Squalene/phytoene synthase [Rhodomicrobium vannielii ATCC 17100]
          Length = 286

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 3/280 (1%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D L     +R  D DRY + L +    R +L  LY F+ EL  V   AR P+   +RL+
Sbjct: 9   ADDLSAAELVRTRDRDRYWSALFAADAARPALLALYAFNAELNHVLAVAREPLAGQIRLK 68

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           WW+D  ES       ++ +P +  L + V  ++LP +  L M++A   + + DS  D  +
Sbjct: 69  WWRDAIESGA--TGEKTGNPVADALKAAVAAHNLPRERLLAMVDARVPELFGDSPADNAE 126

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
           F          L          +R   +    + AG+A  + + +  LP     G+L  P
Sbjct: 127 FAGLIEDSQGALFE-LAAAALGDRSDTTKDAAREAGLALGVIETLRALPFSVAHGRLPLP 185

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
             +L A G+D E+   G+ S ++  A+          L + R +   I P    AF+P++
Sbjct: 186 FALLEAKGVDFEAMALGEVSPKLRAALTELRADAALALQRFRVKQANIAPHARAAFLPLA 245

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           + E  L+      F  +  S T N L R W +  ++ + +
Sbjct: 246 LVEPYLQAMAAPNFHPLRDSVTLNPLGRFWRIWRAARRNK 285


>gi|221134023|ref|ZP_03560328.1| phytoene synthase [Glaciecola sp. HTCC2999]
          Length = 312

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 85/269 (31%), Gaps = 13/269 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
                   A  +         + LY F      + D A +  T   RL   K     S  
Sbjct: 27  QHGKTFRFAQRMLARQTATDAAKLYQFCRICDDLVDEAPDTDTAIARLTQLKSSLSQSNC 86

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
           GL +            +   Y + +     +++    D    +  D  +   Y FR++  
Sbjct: 87  GLPS------IQSFQQLKADYGICDIAITGLLDGMASDLTETTKADENELLQYCFRVAGT 140

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           +  +   IL + R + +  +    G+A  +  +   +    H+G++Y P   LG  GL  
Sbjct: 141 VGLMMCPILQAPRTAEAFAI--DLGVAMQLTNISRDILEDAHKGRIYLPQTWLG--GLSP 196

Query: 210 ESFLSGQNSDR--ISLAIKIFAELGLKYLFKAREEMRYILPDVFPA-FIPVSITESVLKH 266
           +  +    + +  I  A +    L  KY   A   ++ I      A F  + +   +   
Sbjct: 197 KHIIYPSPTQKLVIQQAQQRCLTLAEKYYCSAEIGLKAIPSRNRYAMFCALHLYREIGVE 256

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                +         +   +   +L  + 
Sbjct: 257 IARQNYAFDDGRVVISNRHKLGVLLKRAF 285


>gi|332041215|gb|EGI77579.1| squalene synthase hpnc [Hylemonella gracilis ATCC 19624]
          Length = 301

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 87/287 (30%), Gaps = 20/287 (6%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
               +  +A LL PP  R  +  LY++      + D    P T+ +  L  ++D  ++  
Sbjct: 8   QHYENFPVASLLCPPRLRAPIQALYHYARTADDIADEGDAPATQRLADLTAYRDELQTCF 67

Query: 89  KGLIAESISP-----FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----------- 132
               A++ +P         L  +V + +LP     D++ A   D                
Sbjct: 68  AASAAQAKTPSRWPHIFDPLRLVVHRVELPETPLTDLLSAFMQDVEKTEQTIRQGSRPGA 127

Query: 133 -IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
              D  +   Y  R ++ +  L   +   +   ASL        A  +      L     
Sbjct: 128 AYADRAELLDYCRRSANPVGRLVLHLHGIDD-PASLAQSDAICTALQLINFWQDLSRDIP 186

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           RG+ Y       A G++     + + + +    I        + + +    +  +   + 
Sbjct: 187 RGRHYLTAADRAAHGVNDADLQALRGTAQTQALIADCCAWARQLMRQGAPLVHRMPGRMA 246

Query: 252 PAFIPVSITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                V      +L   +  GF  +              +  +   +
Sbjct: 247 WELRFVVQGGLRILDKIEAQGFNTLQRRPRITVADGALLLWRALGMR 293


>gi|60672689|gb|AAX33349.1| phytoene synthase 1 [Prunus armeniaca]
          Length = 211

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 66/186 (35%), Gaps = 6/186 (3%)

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIK 171
           F DMIE    D       +  +   Y + ++  +  ++  ++           +      
Sbjct: 1   FKDMIEGMRMDLRKSIYQNFDELYLYCYYVAGTVGLMSVPVMGISPESQATTESVYNAAL 60

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             GIA  +  ++  +     RG++Y P D L   GL      +G+ +D+    +K   + 
Sbjct: 61  ALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDSDIYAGKVTDKWRSFMKNQIKR 120

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              +  +A + +  +      P +  + +   +L   + + +   +     ++  +   +
Sbjct: 121 ARMFFDEAEKGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTRRAYVSKAKKLLAL 180

Query: 291 LSSSIK 296
             +  K
Sbjct: 181 PIAYTK 186


>gi|27228294|gb|AAN85600.1| Phytoene Synthase [Pantoea stewartii]
          Length = 296

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 78/273 (28%), Gaps = 12/273 (4%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------NPITRDMRLQWWKD 82
                  A  L     R S+  LY +      V D           +    + RLQ  + 
Sbjct: 4   GSKSFATASTLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFHADQPSSQMPEQRLQQLEM 63

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               +  G       P       +   +D+   Y  D +E    D              Y
Sbjct: 64  KTRQAYAGSQMHE--PAFAAFQEVAMAHDIAPAYAFDHLEGFAMDVRETRYLTLDDTLRY 121

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
            + ++  +  +   I+     +   R     G+A  +  +   +      G+ Y P   L
Sbjct: 122 CYHVAGVVGLMMAQIMGVRDNATLDRACD-LGLAFQLTNIARDIVDDAQVGRCYLPESWL 180

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITE 261
              GL + ++ + +N   +S            Y   +   +  +      A      +  
Sbjct: 181 EEEGLTKANYAAPENRQALSRIAGRLVREAEPYYVSSMAGLAQLPLRSAWAIATAKQVYR 240

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +    +  G +   H  + +   +   +L++S
Sbjct: 241 KIGVKVEQAGKQAWDHRQSTSTAEKLTLLLTAS 273


>gi|217978224|ref|YP_002362371.1| Squalene/phytoene synthase [Methylocella silvestris BL2]
 gi|217503600|gb|ACK51009.1| Squalene/phytoene synthase [Methylocella silvestris BL2]
          Length = 355

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 88/275 (32%), Gaps = 14/275 (5%)

Query: 4   KFLTKNTRKEEKIF-SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
            F  + TR+E         L     L+      + A  L P   + S   LY +      
Sbjct: 23  AFHPEATRRERAAAPDEIVLLARERLKKGSTSFFKAARLFPKSQKASAFLLYAWCRHCDD 82

Query: 63  VRDT---ARNPITR--------DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD 111
             D       P           + R +    + E +   L  ++  P    L  +V  + 
Sbjct: 83  EIDGQILGAAPDITRPPCQRSLEARERTLATLREKTVAALAGQADEPVFAGLQRVVVSHQ 142

Query: 112 LPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
           +P++Y LD+IE    D    S    +    Y++ ++  +  +   I+      A+L    
Sbjct: 143 IPHRYPLDLIEGMAMDVRGRSYACLEDTLSYSYYVAGVVGVMMATIMGVRDR-ATLERAS 201

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             GIA  +  ++  +      G+ Y P + L   G+         + +++        ++
Sbjct: 202 DLGIAFQLTNIVRDVVADAALGRFYLPQNWLDEEGILPCEIGERGHREKVFRISARLLDV 261

Query: 232 GLKYLFKAREEMRYILPDVFPAFIPV-SITESVLK 265
              Y   A   +  +      A      I   + +
Sbjct: 262 ADDYYRSALIGIGRLPFRSAWAIASARRIYRGIGE 296


>gi|194292706|ref|YP_002008613.1| phytoene synthase [Cupriavidus taiwanensis LMG 19424]
 gi|193226610|emb|CAQ72561.1| phytoene synthase [Cupriavidus taiwanensis LMG 19424]
          Length = 296

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 89/263 (33%), Gaps = 7/263 (2%)

Query: 35  RYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAE 94
            + A  + P   R ++  +Y F   +  + D       R   L  W+   ++   G    
Sbjct: 38  FHAALRILPAAQRQAMFEIYAFCRAVDDIADGDAPHADRLAALDAWRRDIDACYAGNPPA 97

Query: 95  SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIHL 153
            + P    L + +R +DL    FL +I+    D   D    D    + Y  R++S +  L
Sbjct: 98  PLQP----LCAQIRAFDLRQADFLAVIDGMTMDVVQDIRAPDAATLDLYCDRVASAVGRL 153

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
           A  +   E       +  + G A  +  ++  +      G+LY P + L A G+   +  
Sbjct: 154 AVRVFGLEEDCGIA-LAHHLGRALQLTNILRDIDEDAAIGRLYLPAEALAAAGIAPATPA 212

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHGF 272
           +      +  A    A     +  +A   M       V    I   +   +L      G+
Sbjct: 213 AVAAHPALGQACAAVAREARAHYDQAWAIMARCPARQVRSPRIMAEVYHRILARLCAQGW 272

Query: 273 KIVSHSHTPNQLVRPWYMLSSSI 295
           +         +    W +L  +I
Sbjct: 273 RAPRRRVRLPRAQLLWIVLRHAI 295


>gi|119094155|gb|ABL60985.1| phytoene synthase CrtB [uncultured marine bacterium HF10_19P19]
          Length = 327

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 93/300 (31%), Gaps = 17/300 (5%)

Query: 8   KNTRKEEKIFSRDSLF------VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
            + R E+K   +D+ +       L+ L       Y A  L      I  + LY     L 
Sbjct: 2   SSPRAEQK--QQDAHYPAERGTALKTLAKNGKSFYWASRLLGRQMAIDAAELYSLCRLLD 59

Query: 62  RVRDT---ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFL 118
            + D      +      RL+  +        G I E   P  ++ + ++ +  +P    +
Sbjct: 60  DIADGDINGLDTKEGTHRLRHIRRQLTQIDAGKIPEQPDPALLQYMQVMNRCQIPVMPLI 119

Query: 119 DMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQF 178
            +++    D     + D      YA+ ++  +  L   +L  +  +A    +   GI   
Sbjct: 120 HLLDGLLLDQSAMLLKDEADLVAYAYHVAGAVGLLMCPVLGCDDRTAFRFAVD-MGIGMQ 178

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVG----LDRESFLSGQNSDRISLAIKIFAELGLK 234
           +  +   +      G+ Y P    G +     +        QN  +I  A      L  +
Sbjct: 179 LTNIARDILEDAQMGRRYLPESWTGQLSPDQIVACAEAPESQNYKQIQAAADRLLTLADQ 238

Query: 235 YLFKAREEMRYILPDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           Y    R  + ++             +  ++    +    +        ++  +    L +
Sbjct: 239 YYESGRLGLGFLPVRARYCIAVAAGVYRAIGTKLRTRKLRWGDGRVVTSKSEKLSASLQA 298


>gi|72536085|gb|AAZ73150.1| phytoene synthase [Enterobacteriaceae bacterium DC413]
          Length = 309

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 72/275 (26%), Gaps = 12/275 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--------TARNPIT 72
               +  +         A  L     R S+  LY +      V D           +  T
Sbjct: 7   LHHAVETMEVGSKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQQLGFPGEVPSAQT 66

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL   +     +  G       P       +   +D+   Y  D +E    D     
Sbjct: 67  PQQRLANLERKTRQAYAGAQMHE--PAFAAFQEVAIAHDISPAYAFDHLEGFAMDVRGAR 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               +    Y + ++  +  +   I+      A L      G+A  +  +   +      
Sbjct: 125 YETFQDTLRYCYHVAGVVGLMMAQIMGVRD-EAVLDRACDLGLAFQLTNIARDIVEDARV 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P   L   GLDR  F    +   ++   +        Y   A   +  +      
Sbjct: 184 GRCYLPESWLEEAGLDRLHFADRAHRPALANLARRLVSEAEPYYASASAGLAGLPLRSAW 243

Query: 253 AFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVR 286
           A      +   +       G        + ++  +
Sbjct: 244 AIATAKEVYRRIGVKVYGAGETAWDRRQSTSKQEK 278


>gi|302851420|ref|XP_002957234.1| hypothetical protein VOLCADRAFT_77474 [Volvox carteri f.
           nagariensis]
 gi|300257484|gb|EFJ41732.1| hypothetical protein VOLCADRAFT_77474 [Volvox carteri f.
           nagariensis]
          Length = 301

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 91/266 (34%), Gaps = 6/266 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI--TRD 74
                 F ++ +R  DY  Y+     P   R SL  L  F+ E   V D+ R+       
Sbjct: 39  LRSAFGFCVQQVRQYDYLNYVWVAQMPKDLRPSLFALRAFNIETALVADSVRSKESVVGQ 98

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE-AHFFDSYNDSI 133
           +R QWW+D  +++ +        P +    +           F  +I+            
Sbjct: 99  IRFQWWRDAVKAAFENRP--PNHPVAFGGAAGNSPSRFSRYCFKRIIDCREADFLDPQPP 156

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D +  E YA   SS+L++L       +   A      + G A  I  L+     H    
Sbjct: 157 LDLQALEQYAEGTSSQLMYLQLAAAGVKHQDA-DHAASHLGRAAGITTLLRGTAAHAAAR 215

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           + Y P+D+     + +E   SG  S+ +   +   A L   +L +AR     + P     
Sbjct: 216 RCYLPVDLCAEARVSQEDVYSGVVSEGLRDVVHKVASLAKGHLDEARRLAPRLPPGAAGV 275

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSH 279
            +P       L+  +   F       
Sbjct: 276 MLPAVAVGRYLEGLEAVNFNPYETKL 301


>gi|294668398|ref|ZP_06733501.1| hypothetical protein NEIELOOT_00316 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309716|gb|EFE50959.1| hypothetical protein NEIELOOT_00316 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 271

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 70/268 (26%), Gaps = 2/268 (0%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKG 90
              +  +  ++ P   R  +  +Y F      V D         +               
Sbjct: 5   HYENFPVGSIMLPRRLRKPVHAVYAFARYADDVADEGDADNDARLAALAALRAELDLIGA 64

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
                 +         V  + L  Q F D++ A   D       +  +   Y    ++ +
Sbjct: 65  GGVPQTALMRRLYEEAVLPFGLDLQPFYDLLSAFAQDVVKTRYQNFAELADYCRHSANPV 124

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
             +   +       +  R       A  +      + + + +G++Y P D L   G+   
Sbjct: 125 GRILLQLYGETDTRSLAR-SDGICTALQLINFWQDVAVDWRKGRVYIPQDDLAKFGVTEA 183

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES-VLKHAQN 269
               G+        +        K L       R +   +      + +    +L+    
Sbjct: 184 QIAEGRADFAFQRLMAYQCGRAFKMLKAGAPLGRTLKGRIGFELRMIVVGGQIILQKLDG 243

Query: 270 HGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
             + +        +      +  + +KK
Sbjct: 244 CRYNVFEQRPVLGKKDWWLIVKRAFLKK 271


>gi|329295593|ref|ZP_08252929.1| Phytoene synthase [Plautia stali symbiont]
          Length = 309

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 74/276 (26%), Gaps = 8/276 (2%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQW 79
           + +         A  L     R S   LY +      V D              D + + 
Sbjct: 12  QTMAQGSKSFASATRLFDSPTRRSTLMLYAWCRHCDDVIDGQTLGEGGTQHAVADAQARM 71

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
                E+      A    P       +   + LP Q   D +E    D+  +     +  
Sbjct: 72  RHLQIETRRAYSGAHMDEPAFRAFQEVALTHQLPQQLAFDHLEGFAMDAREERYERFEDT 131

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y + ++  +  +   ++        L      G+A  +  +   +      G+ Y P 
Sbjct: 132 LRYCYHVAGVVGLMMARVMGVRD-ERVLDHACDLGLAFQLTNIARDIVKDAENGRCYLPQ 190

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS- 258
             L   GL        Q+   ++            Y   AR  +  +      A      
Sbjct: 191 SWLDEAGLSAAQLADPQHRAALAPLAARLVSEAEPYYQSARSGLLGLPLRSAWAIATARG 250

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           +   +    Q+ G +        ++  +   ++  +
Sbjct: 251 VYREIGVKVQHAGARAWDARQRTSKGEKLALLVKGA 286


>gi|219807164|dbj|BAH10586.1| phytoene synthase [Lilium hybrid division I]
          Length = 198

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 64/180 (35%), Gaps = 6/180 (3%)

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGI 175
           IE    D       +  +   Y + ++  +  ++  ++           +        GI
Sbjct: 1   IEGMRMDLKKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESRASTESVYNGALALGI 60

Query: 176 AQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKY 235
           A  +  ++  +     RG++Y PLD L   GL  +    G+ +D+    +K   +    +
Sbjct: 61  ANQLTNILRDVGEDARRGRIYLPLDELAQYGLSEDDIFHGKVTDKWRSFMKNQIKRARMF 120

Query: 236 LFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
             +A + +  +      P +  + +   +L   + + +   +     +++ +   +  + 
Sbjct: 121 FSEAEKGVTELSQASRWPVWASLLLYSQILDEIEANDYNNFTKRAYVSKMKKLMSLPMAY 180


>gi|172060895|ref|YP_001808547.1| squalene synthase HpnD [Burkholderia ambifaria MC40-6]
 gi|171993412|gb|ACB64331.1| squalene synthase HpnD [Burkholderia ambifaria MC40-6]
          Length = 277

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 82/277 (29%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 5   DYCQQKAAPAGSSVYYALRQAPLAAEPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       E   P +  L                ++  +  D       D    + 
Sbjct: 65  KELAALAA---GEPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      +   +        AG A  + Q + +L      G++Y P+D 
Sbjct: 122 YIAQVGGTFASLVARAS-AANPADPQPWAADAGRALMLAQFVQELGNDARHGRIYLPIDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 181 LQRYNVTAADLLNRRYSPAFTELLQFQTARAREALAAADAAIPASERRAQRTLRAQIALA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 241 GALLHEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 277


>gi|170699755|ref|ZP_02890789.1| squalene synthase HpnD [Burkholderia ambifaria IOP40-10]
 gi|170135346|gb|EDT03640.1| squalene synthase HpnD [Burkholderia ambifaria IOP40-10]
          Length = 277

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 83/277 (29%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 5   DYCQQKAAPAGSSVYYALRQAPLAAEPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       E   P +  L                ++  +  D       D    + 
Sbjct: 65  KELAALAA---GEPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      +   +A       AG A  + Q + +L      G++Y P+D 
Sbjct: 122 YIAQVGGTFASLVAR-ASAANPAAPQPWAADAGRALMLAQFVQELGNDARHGRIYLPIDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 181 LQRYNVTAADLLNRRYSPAFTELLQFQTARAREALAAAAAAIPASERRAQRTLRAQIALA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 241 SALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 277


>gi|74317714|ref|YP_315454.1| putative phytoene synthase-like protein [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057209|gb|AAZ97649.1| putative phytoene synthase-like protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 281

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 83/268 (30%), Gaps = 5/268 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
           D   +  +A  L P   R  +S +Y F      + D    P    ++ L  +    +   
Sbjct: 17  DHYENFPVASWLLPGRLREPVSAIYRFARSADDLADEGDAPPRARLQELARYHSELDRIE 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +G I     P    L + +R + LP   F D++ A   D          +   Y  R ++
Sbjct: 77  RGEI--PDDPIFGRLAAAIRAHALPLTPFRDLLSAFAQDIEKTRYASFGEVMDYCRRSAN 134

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +   +              +  +   +  + I Y +G++Y P D L A  + 
Sbjct: 135 PVGRLMLHL-YGDHDPRHQAYSDAICSSLQLINFLQDVAIDYAKGRIYLPQDELAAHHVS 193

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESVLKHA 267
                +G       + +    E   K L       R +   +       +   E++L+  
Sbjct: 194 EAQIAAGDAGGLWRMMMHKQIERARKLLQAGAPLGRALDGRIGLELRVTIRGGETILRKL 253

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                 +        +      +  S +
Sbjct: 254 HADPGCVFGARPVLGKRDWIVMLARSVL 281


>gi|319794083|ref|YP_004155723.1| squalene synthase hpnc [Variovorax paradoxus EPS]
 gi|315596546|gb|ADU37612.1| squalene synthase HpnC [Variovorax paradoxus EPS]
          Length = 304

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 85/283 (30%), Gaps = 15/283 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
               +  +A  L PP  R  ++ +Y+F      + D    +P  R   L+ ++D   ++ 
Sbjct: 12  AHYENFPVASWLCPPHLRPPIAAIYHFARTADDIADEGDASPDQRLAELRAYRDELAAAA 71

Query: 89  KGLIAE--SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----IFDCKQFEHY 142
           +G              L   + QY LP     D++ A   D           D  +   Y
Sbjct: 72  QGEALAGSRWPHVFGPLAHSIAQYSLPEALLADLLSAFMQDIEKTRDYGTYADRAELLDY 131

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             R ++ +  L   +       A          A  +        +   RG+ YFPL   
Sbjct: 132 CRRSANPVGRLLLHLYGVHDAEALA-QSDAICSALQLINFWQDPSVDLPRGRFYFPLTDC 190

Query: 203 GAVGLDRES------FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
              GL RE         +          + + +    + + +    +  +          
Sbjct: 191 SRRGLTREHFKVFEPLSAAPPPQEAINLVSVVSFWARELMEEGAPLVHRLPGRAGWELRL 250

Query: 257 VSITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           V      +L    + GF   S   T  +   P  +  +   +R
Sbjct: 251 VVQGGLRILDKITDLGFDTFSQRPTIGKADAPVLLWKALRMRR 293


>gi|291619715|ref|YP_003522457.1| CrtB [Pantoea ananatis LMG 20103]
 gi|30923192|sp|P21683|CRTB_PANAN RecName: Full=Phytoene synthase
 gi|22474503|dbj|BAA14128.2| crtB [Pantoea ananatis]
 gi|291154745|gb|ADD79329.1| CrtB [Pantoea ananatis LMG 20103]
          Length = 309

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 82/283 (28%), Gaps = 12/283 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------NPIT 72
               +  +         A  L     R S+  LY +      V D              T
Sbjct: 7   LNHAVETMAVGSKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFQARQPALQT 66

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            + RL   +     +  G       P       +   +D+   Y  D +E    D     
Sbjct: 67  PEQRLMQLEMKTRQAYAGSQMHE--PAFAAFQEVAMAHDIAPAYAFDHLEGFAMDVREAQ 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
                    Y + ++  +  +   I+     +   R     G+A  +  +   +    H 
Sbjct: 125 YSQLDDTLRYCYHVAGVVGLMMAQIMGVRDNATLDRACD-LGLAFQLTNIARDIVDDAHA 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P   L   GL++E++ + +N   +S   +   +    Y   A   +  +      
Sbjct: 184 GRCYLPASWLEHEGLNKENYAAPENRQALSRIARRLVQEAEPYYLSATAGLAGLPLRSAW 243

Query: 253 AFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           A      +   +    +  G +      +     +   +L++S
Sbjct: 244 AIATAKQVYRKIGVKVEQAGQQAWDQRQSTTTPEKLTLLLAAS 286


>gi|86132676|ref|ZP_01051269.1| phytoene synthase [Dokdonia donghaensis MED134]
 gi|85816918|gb|EAQ38103.1| phytoene synthase [Dokdonia donghaensis MED134]
          Length = 279

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 86/292 (29%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S    + + +        A  +  P  R  +  +Y F      + D+  +   
Sbjct: 2   KSLFDTVSRSCAKVVTQSYSTSFASATKMLAPCIRQDIYNIYGFVRFADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +  ++ +D+  + T  +   S++P        V +YD+   +    +++   D     
Sbjct: 62  PTLFKRFEEDLEHALTDKI---SLNPILNAFQETVHKYDIDPAHIASFMKSMRLDLTKLD 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
                +++ Y +  +  +  +   +           +       G A      +  L   
Sbjct: 119 YLTDAEYKEYIYGSADVVGLMCLTVFVKGNKEKYESLKDSAMSLGSAFQKVNFLRDLKAD 178

Query: 190 YH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L  +                  + +   E   +   K    +  +  
Sbjct: 179 FEGLSRTYFPNTNLVNLD---------------EASKQRIIEEIEEDFAKGLAGINRLPI 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  +        +L   +     +I +        V+   +  S +K R
Sbjct: 224 EAKFGVYTAFRYYRKLLTKLKRVPSAEIRNTRVRVPDYVKASLLARSYVKYR 275


>gi|32475806|ref|NP_868800.1| phytoene synthase-related protein [Rhodopirellula baltica SH 1]
 gi|32446349|emb|CAD76177.1| phytoene synthase-related protein [Rhodopirellula baltica SH 1]
          Length = 299

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 89/291 (30%), Gaps = 13/291 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYL-ACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
            +          +    + +L A  L P   R     LY F      + D +  P     
Sbjct: 1   MADSRAECRAIAKA-SRENFLVATCLLPRAVRQPFYDLYAFCRTADDLADESGTPEKAVQ 59

Query: 76  RLQWWKDIFESSTKGLIAESISP-FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
            L  ++    +       +       V L   V ++ +P Q   D+++A   D       
Sbjct: 60  ALAEYRQAVAAMYSAKRQDGQIAGIFVALADTVHRFSIPRQLLDDLLDAFVQDQSVVRYR 119

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
           D +Q   Y  R ++ +  +   + D++     L +      A  +      +      G+
Sbjct: 120 DEEQLLDYCRRSANPVGRMILRLADADSDENVL-LSDEICTALQLVNFWQDVSRDRLIGR 178

Query: 195 LYFPLDILGAVGLDRESFLSGQNS-----DRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           +Y P  I+   G + E+   G +S       +  AIK   E   +   +    +  +   
Sbjct: 179 VYLPQSIMHRFGFEEETIRRGLDSGQTTPSEVREAIKFLCERTRERFHRGVPLVDLVPGW 238

Query: 250 VFP-AFIPVSITESVLKHAQNHGFKIVSHSHTP---NQLVRPWYMLSSSIK 296
           +     + V    + +   +   F ++          QL      +    +
Sbjct: 239 LSADLKLFVEGGLATVDAIEAIDFDVLRVRPVVRRSTQLRLLGQAMWQRFR 289


>gi|119713700|gb|ABL97750.1| phytoene/squalene synthetase [uncultured marine bacterium
           EB0_41B09]
          Length = 282

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 84/275 (30%), Gaps = 3/275 (1%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            +  +    +  +A LL P   R + + LY F      + D          +L   +   
Sbjct: 10  AKVTKKHYENFPVATLLFPKALRDATTILYSFARNADDIADEGNLTKNERKKL-LKEIEI 68

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
             ++     +  +PF  +L  ++ QY L  + F   + A   D    +  +     +Y  
Sbjct: 69  NINSIKHQKKIQAPFFRDLDKVINQYSLDIKLFERFMSAFKQDVEKKTYRNFDDLINYCN 128

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           + +     +   + D+     ++        A  +  +   +     +G++Y P   +  
Sbjct: 129 KAACPAGEMILSLFDAHNKK-NVSYSNSLCQALALIGMTQDIYEDLLKGRVYIPSREMNK 187

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-AFIPVSITESV 263
             L          +    +    + +     L K R     +   +     I ++  E +
Sbjct: 188 FKLKESDIKIKSFNHNWKMFKISWLKKIELLLNKGRPLGENVKGRLKLQIKILIAGAELL 247

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +   +        +    +       +  + I K+
Sbjct: 248 VSRLKKEDCDWFVNPPKISNFDWITLLFKTIINKK 282


>gi|67003498|dbj|BAD99409.1| phytoene synthase [Brevundimonas sp. SD212]
          Length = 310

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 31/287 (10%), Positives = 86/287 (29%), Gaps = 12/287 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARN 69
                   +++         A  L P   R      Y +        D           +
Sbjct: 3   DAVLDHSRQSMEQGSKSFAAAARLFPAAIRDDAWMFYAWCRHCDDEIDGQVLGHGAVGID 62

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           P+    +L   ++   ++  G       P       +  ++ +P +  +D+++    D  
Sbjct: 63  PVLAGRKLVELRERTAAALAGEPQT--DPVFTAFQRVAARHAIPAEEAMDLLQGFEMDVE 120

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                  +    YA+ ++  +  +   I+  +      R     G+A  +  +   +   
Sbjct: 121 GRRYDTLEDTLDYAYHVAGVVGVMMARIMGVQDAPTLRRAQD-LGLAFQLTNIARDVVED 179

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI-LP 248
              G++Y P   L   G+ R+     ++   ++   +        Y   AR  +R +   
Sbjct: 180 AKGGRVYLPGQWLDEAGVPRDQVDQPRHRQAVAHTAQRLVAAAEPYYASARWGLRDLNPR 239

Query: 249 DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             +       +  ++ +H    G        + ++  +   +   ++
Sbjct: 240 SAWAVATARGVYRAIGRHVSRSGATAWDGRTSVDKAGKLALVGRGAL 286


>gi|119713781|gb|ABL97829.1| crtI/crtB [uncultured marine bacterium HF10_49E08]
          Length = 764

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 65/269 (24%), Gaps = 15/269 (5%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
               R       LA LL P     ++  LYY    L    D               KD  
Sbjct: 500 QEIFRSKSRTFSLASLLLPKERAEAIFRLYYVCRTLDDWADEGEGNK--------LKDAM 551

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                                +  ++ L +    +++EA   +     I    +   Y  
Sbjct: 552 NCWENHHP----HELLDHYRFLQARWGLASLPLTELMEAMIGELDGVRIQTEDELIKYCH 607

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            ++  +  +   I       A        GIA  +  +   +       ++Y P D    
Sbjct: 608 GVAGTIGLMTCPIFGVSDPDAMK-HADDLGIAMQLTNICRDVYEDAESDRIYLPADFFEN 666

Query: 205 VGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITES 262
           +            S   IS        L           +RY+   +         +   
Sbjct: 667 IPSVEGILSKNPESVAEISQIKTRLLSLADDRYASGEAGIRYLPMRMRIVVRWAGHMYRE 726

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
           + +  +       ++        +   +L
Sbjct: 727 IGELIKRDPSLYHANRAVVTGTKKMRILL 755


>gi|117495|sp|P22872|CRTB_ESCVU RecName: Full=Phytoene synthase
 gi|148403|gb|AAA24821.1| prephytoene pyrophosphate synthase [Pantoea agglomerans]
 gi|148413|gb|AAA64982.1| phytoene synthase [Pantoea agglomerans]
          Length = 309

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 85/282 (30%), Gaps = 12/282 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
                + + +       A  L  P  R S+  LY +      V D         A     
Sbjct: 7   LDHATQTMANGSKSFATAAKLFDPATRRSVLMLYTWCRHCDDVIDDQTHGFASEAAAEEE 66

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              RL   + +  ++ +   AE   P       +   + +  +  LD ++    D     
Sbjct: 67  ATQRLARLRTLTLAAFE--GAEMQDPAFAAFQEVALTHGITPRMALDHLDGFAMDVAQTR 124

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               +    Y + ++  +  +   ++        L      G+A  +  +   +      
Sbjct: 125 YVTFEDTLRYCYHVAGVVGLMMARVMGVRD-ERVLDRACDLGLAFQLTNIARDIIDDAAI 183

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            + Y P + L   GL  E++ + +N   ++   +   +    Y   ++  +  + P    
Sbjct: 184 DRCYLPAEWLQDAGLTPENYAARENRAALARVAERLIDAAEPYYISSQAGLHDLPPRCAW 243

Query: 253 AFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           A      +   +    +  G          ++  +   ++++
Sbjct: 244 AIATARSVYREIGIKVKAAGGSAWDRRQHTSKGEKIAMLMAA 285


>gi|312083787|ref|XP_003144007.1| hypothetical protein LOAG_08427 [Loa loa]
 gi|307760829|gb|EFO20063.1| hypothetical protein LOAG_08427 [Loa loa]
          Length = 463

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 103/307 (33%), Gaps = 13/307 (4%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           +   +     +K+ +      L+  R+ DY  Y+A L+ P   + +L  L  F+ EL  +
Sbjct: 159 QRCPQLKPPSKKVINEALHQCLQITRERDYTNYVAGLVMPSKIQPALFTLLAFNAELAVI 218

Query: 64  RDTA--RNPITRDMRLQWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPNQYFLDM 120
           RD     + I+   RLQ+W+D  +             P ++ L     ++        ++
Sbjct: 219 RDQVVRNSGISGIYRLQFWRDTLDVLYGQTKGPLPRQPVAIALSLFGHRF--DEHLLRNL 276

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMI-------LDSERYSASLRVIKYA 173
           I A      +         + Y    +  +  L   +        +      +++ I+  
Sbjct: 277 ITARQKTLGDRPFESLDDVKKYGIETTGSITQLVMHLLSGAHEANEIPLSEEAIQAIESM 336

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGL 233
             A  +  LI  +     RG    P D++    L  +     +  + +    K    +  
Sbjct: 337 SHAVSVITLIRSMMPLLARGIFLLPNDLMEKYQLSADDIFWNKKQNALRDLAKELTNIAE 396

Query: 234 KYLFKAREEMRYILPDVFPAFIPVSITESVLKH-AQNHGFKIVSHSHTPNQLVRPWYMLS 292
           + L K+R+    I P++  A +    T   L        + +++        +  W    
Sbjct: 397 EELLKSRQYRESIEPNLRLALMASGATLDHLVKTLHESNYNLLNTRLQRGYDLLAWRFWW 456

Query: 293 SSIKKRF 299
                R+
Sbjct: 457 RKFLGRY 463


>gi|148673714|gb|EDL05661.1| mCG5105, isoform CRA_b [Mus musculus]
          Length = 246

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 85/235 (36%), Gaps = 22/235 (9%)

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D+        MR+Q+WK   E            P ++EL                     
Sbjct: 34  DSVSEKTIGLMRMQFWKKAVEDMYCDNP--PHQPVAIELW-------------------K 72

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             +  + +    ++ E+YA      L++L   +L  +   A      + G AQ I   + 
Sbjct: 73  EKNLDDKAYRSMQELENYAENTQGSLLYLTLEVLGVKDLHA-DHAASHIGKAQGIVTCLR 131

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
             P H  R Q++ P+D+    G+ +E FL       +   +   A     +L  AR   R
Sbjct: 132 ATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHR 191

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +  + FPAF+     E  LK  Q   F I   S     ++ P  +   S +KR+
Sbjct: 192 SVPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNMLLPLSLYIQSWRKRY 246


>gi|255953433|ref|XP_002567469.1| Pc21g04230 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589180|emb|CAP95320.1| Pc21g04230 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 392

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 101/343 (29%), Gaps = 68/343 (19%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              + +  L   D   Y      P   +     L   +  L  + DT  +P    MRLQ+
Sbjct: 50  AHQYCVALLSKYDRPSYTLSTFIPRHAQSFYVALRALNVSLSMIPDTTSSPTIGLMRLQF 109

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDSYND 131
           W+D       G       P ++ L S +         +  +   +   +I +      ND
Sbjct: 110 WRDSVTRILAGTP--PKEPVAILLASAISELHERTQGRARISKGWLTRLINSREQTLTND 167

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-- 189
              +    E YA    S L++L    L     +A   V  + G A  I  ++  LP    
Sbjct: 168 PYPNIAALESYAENTYSTLMYLTLSALPMTSVTA-DHVASHIGKAVGIAAVLRGLPFVAF 226

Query: 190 --------------------YHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIF 228
                                 +G +  PLD++   G+  E  L  G  ++ +  A+   
Sbjct: 227 PAPPAQAPAGGAASSMIGGGAKQGAVMLPLDVMAQAGVKEEDVLRYGAQAEGLRDAVFTV 286

Query: 229 AELGLKYLFKAREEMRYILP----------------------------------DVFPAF 254
           A     +L   ++ +  +                                      F  F
Sbjct: 287 ATRASDHLITVQQMLSNLRAGEDVGHDFEHEGEEGHEYDVPGARSSESPLDEVNRAFGVF 346

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +P       L   +   F + S +   +    PW   S+  +K
Sbjct: 347 LPAVGARMWLDRLEKQDFDVFSPNLLRSDWRLPWKAYSAYRRK 389


>gi|325285375|ref|YP_004261165.1| Phytoene synthase [Cellulophaga lytica DSM 7489]
 gi|324320829|gb|ADY28294.1| Phytoene synthase [Cellulophaga lytica DSM 7489]
          Length = 278

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 95/293 (32%), Gaps = 26/293 (8%)

Query: 14  EKIFSRDSLFVLRNLRD-IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S+   + +         +   L  P  R ++  +Y F      + DT  +   
Sbjct: 2   KALFDSSSVNCSKLITTTYSTSFSIGIKLFAPSIRPAIYAIYGFVRYADEIVDTFHDYNQ 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            ++  ++ ++  +S  + +   S++P       +V +YDL  +Y    + +  FD     
Sbjct: 62  EELLNEFEEEYRKSLIRKI---SLNPIINSFQEVVLKYDL-QEYVDAFLTSMRFDLNKTE 117

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
               +++  Y +  +  +  +   +  +        + +   Y G A      +      
Sbjct: 118 YSTREEYNEYIYGSADVVGLMCLRVFVNNDNERFNHLKESAQYLGSAFQKVNFLRDFKDD 177

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            +  G+ YFP   L    L                A     +       +A + +  +  
Sbjct: 178 INELGRSYFP--ELNTNTLTHT-------------AKDRILKDIENDFSEAYKGIVQLPL 222

Query: 249 DVF-PAFIPVSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +     F+       +L   +      I++     +  ++   +  + I+ +F
Sbjct: 223 ESRLGVFVAYKYYSKLLNKLKKADTSSIMNSRIRISNPLKFLILTKAYIRFKF 275


>gi|306437928|emb|CAA91382.3| C. elegans protein B0334.5, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 420

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 101/303 (33%), Gaps = 12/303 (3%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV--- 63
           T+     ++         L  +R  D D YLA L      +  +  L   + EL  +   
Sbjct: 120 TRFLEISKQQADEAFRSCLEMVRKHDIDSYLAILTINKRAQPEIVALNALNVELASIRDK 179

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPNQYFLDMIE 122
            DT +   +   RLQ+WKD   S            P ++ L S     +      L ++E
Sbjct: 180 VDTRKGDASAMYRLQFWKDAISSIYGISPLPVPRQPVAIALCSFAAGANSD--MLLKLVE 237

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
                  +    D      Y       L+      LA    +++    +  V K  G A 
Sbjct: 238 TRQSTIGDRQFSDINALCEYGKSTIGSLLCLQIDALARNSPETKVLPMAYDVAKDLGAAY 297

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            I  +I        RG +  P D++   G   +S    +  D +    K       + L 
Sbjct: 298 AIANMIRATHPLLARGIVLLPADVMSLNGATPDSLYKKKKLDEMVGMTKDLVNESKRLLI 357

Query: 238 KAREEMRYILPDVFPAFIP-VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            AR  +  +   V PA     + T+ ++K  + + + I S        +  W +L   + 
Sbjct: 358 DARSPIEMVPKAVRPALAATGATTDYIIKTIEKNNYDIYSPHLQRRNPLLLWSLLVRKLC 417

Query: 297 KRF 299
            ++
Sbjct: 418 SKY 420


>gi|91783513|ref|YP_558719.1| putative phytoene synthase [Burkholderia xenovorans LB400]
 gi|91687467|gb|ABE30667.1| Putative phytoene synthase [Burkholderia xenovorans LB400]
          Length = 284

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 30/273 (10%), Positives = 76/273 (27%), Gaps = 5/273 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    E         +P     +L WW+
Sbjct: 15  EYCQQKAAPPGSSTYYALRQAPAASQPLLTALFALRREFEETVKETSDPTIGRTKLAWWQ 74

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +   +           P S  L + +            ++     D       D      
Sbjct: 75  NEIAALA---SDSPSHPVSKALAAYLPDVKTEYPALQTLLAGFEMDLDQARYLDYPNLRR 131

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   +      L       +   A        G A  + Q + +       G++Y P+D 
Sbjct: 132 YVQGVGGTFASLVARATAKDAAQA-SNWSAPLGEALMLAQFVVETGHDARHGRIYIPIDE 190

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           +    +     ++ + ++  +  ++   +     L  A   +               ++ 
Sbjct: 191 MQRFNVTAADLINRKYTEAFTELMRFETKRARDALQSALGAVPGSERRTQRTLVAQAALA 250

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            ++L   +  G+ ++        + + W    +
Sbjct: 251 SALLDEIERDGYHVLHQRIALTPIRKLWIAWRA 283


>gi|25150675|ref|NP_496458.2| hypothetical protein B0334.5 [Caenorhabditis elegans]
          Length = 500

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 101/303 (33%), Gaps = 12/303 (3%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV--- 63
           T+     ++         L  +R  D D YLA L      +  +  L   + EL  +   
Sbjct: 200 TRFLEISKQQADEAFRSCLEMVRKHDIDSYLAILTINKRAQPEIVALNALNVELASIRDK 259

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPNQYFLDMIE 122
            DT +   +   RLQ+WKD   S            P ++ L S     +      L ++E
Sbjct: 260 VDTRKGDASAMYRLQFWKDAISSIYGISPLPVPRQPVAIALCSFAAGANSD--MLLKLVE 317

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
                  +    D      Y       L+      LA    +++    +  V K  G A 
Sbjct: 318 TRQSTIGDRQFSDINALCEYGKSTIGSLLCLQIDALARNSPETKVLPMAYDVAKDLGAAY 377

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            I  +I        RG +  P D++   G   +S    +  D +    K       + L 
Sbjct: 378 AIANMIRATHPLLARGIVLLPADVMSLNGATPDSLYKKKKLDEMVGMTKDLVNESKRLLI 437

Query: 238 KAREEMRYILPDVFPAFIP-VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            AR  +  +   V PA     + T+ ++K  + + + I S        +  W +L   + 
Sbjct: 438 DARSPIEMVPKAVRPALAATGATTDYIIKTIEKNNYDIYSPHLQRRNPLLLWSLLVRKLC 497

Query: 297 KRF 299
            ++
Sbjct: 498 SKY 500


>gi|111220882|ref|YP_711676.1| putative phytoene synthase [Frankia alni ACN14a]
 gi|111148414|emb|CAJ60086.1| putative phytoene synthase [Frankia alni ACN14a]
          Length = 332

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 77/271 (28%), Gaps = 7/271 (2%)

Query: 25  LRNLRDIDYDRYLAC-LLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
            + LR    + +    ++ P   R   + LY F   +  + D A       +     +  
Sbjct: 27  EQLLRAAPAENFPVSPIVLPAAVRAHFNALYAFSRFVDNLGDEAAGDRLALLD----RVS 82

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            + S      E        L   VR  DLP + F  ++EA+  D              Y 
Sbjct: 83  ADLSVIWAGGEPELGVLRLLAPTVRACDLPAEPFERLVEANRQDQRVTRYDTFDDLVRYC 142

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
              +  +  +   +           +      A  + +    +      G++Y P + L 
Sbjct: 143 TLSADPIGRMVLGVFGLATPDRV-VLSDKVCTALQLAEHWQDVAEDLAAGRIYLPREDLD 201

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITES 262
             G+  +   +   S  +   +          + +    +  +   +  A    V    +
Sbjct: 202 TFGVTEDDLRAKAASPAVRHLMAFEVSRARTVMDQGAPLVATVPGRLRLALAGFVGGGRA 261

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            L   +   + ++       +     + L +
Sbjct: 262 ALDAIRRADYDVLGGPPKAPKPRMARFALVA 292


>gi|114769801|ref|ZP_01447411.1| phytoene synthase [alpha proteobacterium HTCC2255]
 gi|114549506|gb|EAU52388.1| phytoene synthase [alpha proteobacterium HTCC2255]
 gi|161170298|gb|ABX59268.1| synthase [uncultured marine bacterium EB000_55B11]
 gi|297183826|gb|ADI19949.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
          Length = 306

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 80/284 (28%), Gaps = 24/284 (8%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L         A            + LY F   L  + D   + I    RL   +D    +
Sbjct: 15  LASYGKSFNWAKRFLGKTMGTDAAILYRFCRVLDDMADG--DIIDGPERLFKIRDGLLKN 72

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
            +        P  +E    +    LP    + +I+    D     I +  +   Y +R++
Sbjct: 73  YQT-----DDPLLIEFELFITSKKLPKLVIISLIDGLLGDQEIVLIKNEFELLRYCYRVA 127

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
             +  L   +LD +   A    I   GIA  +  +   +      G+ Y P   +G   +
Sbjct: 128 GTVGILMCNVLDCDETDAIDYAID-LGIAMQLTNIARDILEDAQMGRRYLPESWVG--DV 184

Query: 208 DRESFLSGQNSDRISLAIK------IFAELGLKYLFKAREEMRYILPDVFPAF-IPVSIT 260
             E  +      +   A            L  +Y         Y+      A  +   + 
Sbjct: 185 TPEEIVQISQHPKSKRAQDICIGSKKLLNLAEQYYTSGLTGCAYLPLRAHAAISVAALVY 244

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVR-------PWYMLSSSIKK 297
             +    +N G+   +     +   +          +     KK
Sbjct: 245 RQIGIKTKNKGYPWFNGREFTSTSEKIICSFFGLLILYKRLFKK 288


>gi|255535644|ref|YP_003096015.1| Phytoene synthase [Flavobacteriaceae bacterium 3519-10]
 gi|255341840|gb|ACU07953.1| Phytoene synthase [Flavobacteriaceae bacterium 3519-10]
          Length = 281

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 31/279 (11%), Positives = 75/279 (26%), Gaps = 24/279 (8%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
                      A  L  P  R  +  +Y F      + DT        +  ++       
Sbjct: 18  VTERYSTSFARASTLFQPEIRQHIYNIYGFVRFADEIVDTFHGYDKAKLMAEF---ETSY 74

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                   S++P         R+ ++P       + +   D  +      +++  Y +  
Sbjct: 75  RVALENGISLNPILHSFCRTQREKNIPQHLVDSFLHSMKMDLADIKDLTDEKYNEYIYGS 134

Query: 147 SSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDIL 202
           +  +  +   +    + E Y       +  G A      +  +   ++   + YFP    
Sbjct: 135 AEVVGLMCLKVFLNGNVEEYEKLKPYAQSLGAAFQKINFLRDISADFNDLNRTYFPNVDF 194

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITE 261
               +                  K   E        A + +R +        F+      
Sbjct: 195 QKFSIAD---------------KKEIEEDIAADFAHAIKGIRMLPISSRIAVFMAYKYYN 239

Query: 262 SVLKHAQNH-GFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++LK  +     ++++     +   + +      I K F
Sbjct: 240 NLLKKIRKAQPAQLLNQRIRVSNARKVYLFGEMMINKNF 278


>gi|312796435|ref|YP_004029357.1| Phytoene synthase [Burkholderia rhizoxinica HKI 454]
 gi|312168210|emb|CBW75213.1| Phytoene synthase (EC 2.5.1.32) [Burkholderia rhizoxinica HKI 454]
          Length = 291

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 88/273 (32%), Gaps = 6/273 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ LY  H EL        +P     +L WW+
Sbjct: 23  DYCQQKAAPAGSSTYYALRQAPLTAQPLLTALYALHRELAESVSEVSDPAVGRAKLAWWQ 82

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
             F +  +        P +  +         P + F+  +  +  D       D      
Sbjct: 83  REFGALAQ---DAPTHPVTQAIARYYAS-TAPIEAFMTWLSGYQMDLDQARYLDFAGLRR 138

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++ + L      +  +   ++        G A  +  ++ +      RG++Y P+D 
Sbjct: 139 YVEQVGAALASTVAGVT-AREPTSLASWAPALGRALLLADIVERTGEDARRGRIYIPIDE 197

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP-VSIT 260
           +   G+     L  +  +  +  +    E   + L  A   +  +            +++
Sbjct: 198 MQRFGVTAADILHRRYGEGFTQLMSFQVERARRALTDALGAIPAVERRTQRVLRAQAAMS 257

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            ++L+  +   ++++        L + W    +
Sbjct: 258 LALLRELEAEDYRVLHQRIALTPLRKLWIAWRT 290


>gi|116618149|ref|YP_818520.1| farnesyl-diphosphate farnesyltransferase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116096996|gb|ABJ62147.1| farnesyl-diphosphate farnesyltransferase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 292

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 93/268 (34%), Gaps = 5/268 (1%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           ++      Y A          S+  +Y +  ++    D          +L +W +   ++
Sbjct: 22  IKQNSSSFYFAFSKLDKDQAYSIFVIYDYLRQIDDAADNHD--RITFNKLIFWWETACNT 79

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
              +I ++ +  +  +  I   + +  +   DMI+    D  N  I    + E+Y ++++
Sbjct: 80  NNIVINKTSN-IADRVAYIFNHFSIDTKLMTDMIQGQLRDLNNIEINTLSELENYCYQVA 138

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
             +  +   IL       + + +   GIA  +  ++  +       + + P  +L    +
Sbjct: 139 GTVGCMIFCILSRNSIENNRKAVINVGIALQLTNILRDVHEDAMADRYFIPKQLLLKYDI 198

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY-ILPDVFPAF-IPVSITESVLK 265
            ++  L  +   +    ++  A L L    +        +      A  + +++ + +L 
Sbjct: 199 QKQVLLESKPDIQTQSLLQYLARLALSKYAETDVITNQILDRKGKVALELSINVYKKILT 258

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
               + F  +S         +   +L +
Sbjct: 259 KLMKNNFVDLSKRVYVTPQEKLLLLLKT 286


>gi|21326700|gb|AAL82578.1| phytoene synthase radicle isoform [Oryza sativa Indica Group]
          Length = 204

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 62/183 (33%), Gaps = 6/183 (3%)

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLRVIKYAG 174
           MIE    D          +   Y + ++  +  +   ++              +     G
Sbjct: 5   MIEGMRLDLTKSRYRSFDEVYLYCYYVAGTVGLMTVPVMGISPDSRANTETVYKGALALG 64

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +A  +  ++  +     RG++Y P+D L   GL  +    G+ +DR    ++        
Sbjct: 65  LANQLTNILRDVGEDARRGRIYLPMDELEMAGLSEDDIFDGRVTDRWRCFMRDQITRARA 124

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +  +A E    +  +   P +  + +   +L   + +G+   +      +  +   +  +
Sbjct: 125 FFRQAEEGASELNKESRWPVWASLLLYRQILDEIEANGYNNFTKRAYVPKAKKIVALPKA 184

Query: 294 SIK 296
             +
Sbjct: 185 YYR 187


>gi|260062284|ref|YP_003195364.1| putative phytoene synthase [Robiginitalea biformata HTCC2501]
 gi|88783846|gb|EAR15017.1| Putative phytoene synthase [Robiginitalea biformata HTCC2501]
          Length = 279

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 82/292 (28%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNLR-DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S    +           LA  +     R  +  +Y F      + D+  +   
Sbjct: 2   KALFDTVSEACSKLTTNRYSTSFSLATKMLAKGIRQDIYNIYGFVRFADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +  ++ +D+           S++P      +   +Y++P       + +   D +   
Sbjct: 62  ATLLSRFERDL---DLALQERISLNPILNAFQATYHKYEIPRHLVDSFLRSMRMDLHKKV 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
               ++++ Y +  +  +  +   +          ++ +     G A      +  L   
Sbjct: 119 YRSEEEYKEYIYGSADVVGLMCLCVFVKGDKERYEQLRESAMALGSAFQKVNFLRDLRAD 178

Query: 190 YH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           Y    + YFP   L  +                  +     +   +   K    +  +  
Sbjct: 179 YDGLERTYFPNTNLLELD---------------EESKARIVQEIEEDFRKGYRGILKLPG 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
           D  F  ++       +L   Q     ++           +   +  S +K R
Sbjct: 224 DSKFGVYMAYRYYSKLLHKLQRTPSVELRHARIRVPNYQKVGLLARSYVKYR 275


>gi|308510428|ref|XP_003117397.1| hypothetical protein CRE_02132 [Caenorhabditis remanei]
 gi|308242311|gb|EFO86263.1| hypothetical protein CRE_02132 [Caenorhabditis remanei]
          Length = 416

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 65/311 (20%), Positives = 110/311 (35%), Gaps = 15/311 (4%)

Query: 2   VLKFLTKNTRK---EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHT 58
           V K +TK+ R     +K         L  +R  D D YLA L      +  +  L   + 
Sbjct: 108 VPKSITKSNRVLEISKKQADEAFRSCLEMVRKHDVDSYLAILTMNKKAQPEIVALNALNV 167

Query: 59  ELMRV---RDTARNPITRDMRLQWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPN 114
           EL  +    DT R   +   RLQ+WKD   S            P ++ L S   +    +
Sbjct: 168 ELASIRDKVDTRRGDTSAMYRLQFWKDAISSIYGLSPLPVPRQPVAIGLCSFASRA--DH 225

Query: 115 QYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRV 169
              L ++E       +    D      Y       L+      LA +  D++    +  V
Sbjct: 226 NMLLKLVETRQSTIGDRQFPDINALSEYGKSTIGSLLCLQIDALARISADTKVLPMAYDV 285

Query: 170 IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
            K  G A  I  +I        RG +  P+D++   G   +S    +  D      +   
Sbjct: 286 AKDLGAAYAIANIIRATHPLLARGIVLLPVDVMSLNGATPDSLYKKKKLDEACGVTRDLI 345

Query: 230 ELGLKYLFKAREEMRYILPDVFPAFIP-VSITESVLKHAQNHGFKIVSHSHTPNQLVRPW 288
               + L  AR  +  +   V PA     +IT+ ++K  +++ + I S        +  W
Sbjct: 346 NESKRLLNDARSRIDMVPKAVRPALAATGTITDYIIKTVESNKYDIYSPHLQRRNPLLLW 405

Query: 289 YMLSSSIKKRF 299
            +L   +  +F
Sbjct: 406 SLLVKKLCSKF 416


>gi|134078102|emb|CAK40184.1| unnamed protein product [Aspergillus niger]
          Length = 378

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 62/331 (18%), Positives = 100/331 (30%), Gaps = 47/331 (14%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E        +    L   D   Y      P   +     L   +  L  + DT  +   
Sbjct: 50  SEAEVQAAQKYCSNLLLQYDRPSYTLSTFIPRNAQSFYIALRALNVSLSLIPDTTSSHTI 109

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAH 124
             MRLQ+W+D    +  G       P ++ L S +         +  +   +   MI A 
Sbjct: 110 GLMRLQFWRDAVAKTLSGSP--PKEPIAILLASAISDLAERTQGRARISKGWLNRMINAR 167

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
                ND   D    E YA    S L++L    L     +A   V  + G A  I  ++ 
Sbjct: 168 EQTLTNDPYPDIAALESYAESTYSTLLYLTLSALPMTSVTA-DHVASHIGKAAGITAVLR 226

Query: 185 QLP---IHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAR 240
            LP       +G +  PLD++   G+  E     G  +  +  A+   A     +L   +
Sbjct: 227 GLPLVAFPAKQGAVMLPLDVMAQAGVKEEEVFRLGSEAPGLRDAVFAVATRASDHLITVQ 286

Query: 241 EEMRYILP--------------------------------DVFPAFIPVSITESVLKHAQ 268
           + +  I                                    F  F+P   T   L   +
Sbjct: 287 QMLSNIRAGQDAGHDFEHGHEEDHQYDLGSQNETPLQEVNRAFGVFMPAVGTRLWLDRLE 346

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +H F I       +    PW    +  +K F
Sbjct: 347 SHDFDIFQPELLRSDWKLPWKAYMAFTRKTF 377


>gi|304321749|ref|YP_003855392.1| phytoene synthase [Parvularcula bermudensis HTCC2503]
 gi|303300651|gb|ADM10250.1| phytoene synthase [Parvularcula bermudensis HTCC2503]
          Length = 321

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 86/283 (30%), Gaps = 13/283 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
           +      +        LA LL  P  R     LY +      V D           +P  
Sbjct: 9   AEHAEATISKGSKSFALASLLFRPNMRRHAQMLYSWCRYCDDVIDGQNLGFDAAPHDPAA 68

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPF-SVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
              R +    +  ++   +    ++      L  +V   D+P  + L ++     D    
Sbjct: 69  HIPRAKDLDYLHRNTLAAIEGRDVAALPFAALREVVAATDMPAVHPLALLRGFEMDVDQR 128

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS-LRVIKYAGIAQFIGQLICQLPIHY 190
           +  D +    Y + ++  +  +  +I+  +    + L      GIA  +  +   +    
Sbjct: 129 AYDDLEALLEYCYHVAGVVGVMMAIIMGVDPEDDNTLNRASDLGIAFQLTNICRDVIDDA 188

Query: 191 HRGQLYFPLDILGAVGL--DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           H  ++Y P D+L   GL           N +R+    +   +   KY   A   +R +  
Sbjct: 189 HIERIYLPTDLLWREGLVPTPAVVRDPANRERVWRVAQTLLDEADKYYRSAGPGVRRLPI 248

Query: 249 DVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
               A      +   + +  +  G          ++  +    
Sbjct: 249 RAGFAVAAARGVYRDIGRVVRARGRAAWDVRARTSRRRKLALA 291


>gi|171684041|ref|XP_001906962.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941981|emb|CAP67633.1| unnamed protein product [Podospora anserina S mat+]
          Length = 593

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 81/301 (26%), Gaps = 32/301 (10%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L+      YLA  L     RI L  LY F      + D + +               +  
Sbjct: 292 LKAKSRSFYLANSLFTGRLRIDLILLYSFCRLADDLVDDSTSRTEVKSWTTKLYKFLDLH 351

Query: 88  T-----------KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF-- 134
                          I E+  P +   L  +    LP+Q    +IE    DS        
Sbjct: 352 YKSDVKANKARINDYIDEAFPPEAKSALKYLPATILPSQPLYQLIEGFELDSQFSFHDSS 411

Query: 135 --------DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI--------KYAGIAQF 178
                   D  +  +Y   ++  +  L   ++                    +  G+A  
Sbjct: 412 ESAKYPIVDEDKLNYYGQCVAGTVGELCVALIIEHCEPEMPDERKKMLMSVSRTMGVALQ 471

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
              +   + +    G++Y P   L   GL  E  ++      +    +       K   +
Sbjct: 472 YVNIARDIVVDAEMGRVYLPTTWLKEEGLTPEDVVAHPRGKHVENLRRRLLSEAFKLYDE 531

Query: 239 AREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFKI--VSHSHTPNQLVRPWYMLSSSI 295
           AR +M  I  +     I        + +  +     +       T     R   +L +  
Sbjct: 532 ARPKMNGIPKEARGPMIGAVETYMEIGRVLRELEGGVELERGKATVPGGRRLKTVLKALF 591

Query: 296 K 296
            
Sbjct: 592 S 592


>gi|327300345|ref|XP_003234865.1| hypothetical protein TERG_03917 [Trichophyton rubrum CBS 118892]
 gi|326462217|gb|EGD87670.1| hypothetical protein TERG_03917 [Trichophyton rubrum CBS 118892]
          Length = 594

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 94/316 (29%), Gaps = 27/316 (8%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F  ++    +    ++ L  +  L+      YL   +     R+ L  LY F  +   + 
Sbjct: 277 FFMRSHHHCDTNVLQEMLEAVTLLKQKSQSMYLGSAIFEGQIRLDLIALYSFCRKTDDLI 336

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPF------------SVELLSIVRQYDL 112
           D A N  T    ++  +   E   K   A   +                  + ++    L
Sbjct: 337 DDAPNRETAQYWIKQCEKALELRFKLKGAALDNKEAYQQLTKSIPQPLHAAVHLLPASRL 396

Query: 113 PNQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
           P     D+++    D   D       I      E YA+ ++  +  L   ++      + 
Sbjct: 397 PKGPLSDLLKGFEIDMKFDSERGIFPIATEHDLEVYAYHVAGTIATLLLELVFRHYPVSI 456

Query: 167 LRVIKY--------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNS 218
               +          G A     +   +      G++Y P   L   GL     ++    
Sbjct: 457 SDSDRLRVVSAGEGMGRALQYTNIARDIVRDAEIGRVYIPSLWLAEQGLTPSMVINQPRD 516

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSH 277
            ++    +   +   K     RE +  +  +V  P    V++   + +  + +  K  + 
Sbjct: 517 PKLIPLRRRLLDKAEKCYRDTREAISELPANVRGPVRATVTVYMDIGQVIRENERKFWNG 576

Query: 278 SHTPNQLVRPWYMLSS 293
               ++         +
Sbjct: 577 KLKISRWRLFKGAWLA 592


>gi|88803337|ref|ZP_01118863.1| phytoene synthase [Polaribacter irgensii 23-P]
 gi|88780903|gb|EAR12082.1| phytoene synthase [Polaribacter irgensii 23-P]
          Length = 280

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 32/293 (10%), Positives = 87/293 (29%), Gaps = 26/293 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           +++F   S    + +         +A     P  R  +  +Y F      + DT      
Sbjct: 2   KELFDTVSNDCSKLVTEKYSTSFSMAVNTLSPKIRTDIYNIYGFVRFADEIVDTFHEYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +   + +D         +  S++P        V +Y++P++     +++   D +   
Sbjct: 62  ELLMTHFERD---YYMGKEMGISLNPILNSFQQTVNKYNIPDEMVQAFLKSMKADLHKTV 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY---AGIAQFIGQLICQLPIH 189
               ++++ Y +  +  +  +   +  +        +       G A      +  L   
Sbjct: 119 YETKEEYDAYIYGSADVVGLMCLKVFVNGDDVQFDLLKDAAMRLGSAFQKVNFLRDLKDD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR-EEMRYIL 247
           Y    + YFP   LG +    +                   +        A    +  + 
Sbjct: 179 YEVLNRSYFPNIDLGKLNTASKQL---------------IIDEIKADFDFAFTNGILKLP 223

Query: 248 PDV-FPAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKR 298
            +  F  ++       +L    +   + I+      +  ++   +  S +K +
Sbjct: 224 AEAKFGVYMAYRYYRRLLMKLDSVPSEKIMDTRIRISDPMKLNLLARSYVKYK 276


>gi|120610150|ref|YP_969828.1| squalene/phytoene synthase [Acidovorax citrulli AAC00-1]
 gi|120588614|gb|ABM32054.1| Squalene/phytoene synthase [Acidovorax citrulli AAC00-1]
          Length = 345

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 69/271 (25%), Gaps = 8/271 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESST 88
               +  +A  L PP  R  ++ +Y F      + D   + P  R   L  +        
Sbjct: 73  THYENFPVASWLCPPALREPIAAIYGFARTADDIADEGDDTPAERLEVLAEYTTELHRIA 132

Query: 89  K-GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND----SIFDCKQFEHYA 143
                    +     L   +R + LP     D++ A   D        +     +   Y 
Sbjct: 133 AGHPPGARWAAVFGPLQRAIRAHALPVPLLADLLSAFTQDIVRTSAGLTYAHRDELLDYC 192

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R ++ +  L   +       A  R       A  +        +   RG+ Y     L 
Sbjct: 193 RRSANPVGRLLLHLYGIGDARALAR-SDAICTALQLINFWQDFSVDLPRGRHYLTDADLA 251

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
             G+DR          R    +   A      + +    +  +   +      V      
Sbjct: 252 RFGIDRALLQRQPIDPRARALVADNAAWARALMEEGAPLVHQLPGRIGWELRLVVQGGLR 311

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +L   +      +              +  +
Sbjct: 312 ILDKVEALRGDSLVRRPVLGGFDWLRMVARA 342


>gi|84043361|gb|ABC50113.1| phytoene synthase [Brevundimonas vesicularis]
          Length = 310

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 84/284 (29%), Gaps = 12/284 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARN 69
                   +++         A  L P   R     LY +        D           +
Sbjct: 3   DAVLDHSRQSMEQGSKSFAAAARLFPAAIRDDAWMLYSWCRHCDDEIDGQVLGHGAVGID 62

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           P+    +L   +    ++  G       P       +  ++ +P    +D+++    D  
Sbjct: 63  PVLAGEKLDELRLRTAAALAGEPQT--DPVFTAFQRVAMRHGIPADEAMDLLQGFEMDVV 120

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                  +    YA+ ++  +  +   I+  E      R     G+A  +  +   +   
Sbjct: 121 GRRYDTLEDTLDYAYHVAGVVGVMMARIMGVEDAPTLRRAQD-LGLAFQLTNIARDVVED 179

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
              G++Y P   L   G+ R+     Q+   ++   +        +   AR  +R + P 
Sbjct: 180 AKGGRVYLPGAWLDEAGVPRDQVDQPQHRAAVARTAQRLVAAAEPFYASARWGLRDLNPR 239

Query: 250 VFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
              A      +  S+ +H    G        + ++  +   +  
Sbjct: 240 SAWAIATARGVYRSIGRHVSRAGVSAWDGRTSIDKAGKLMLLGR 283


>gi|284040790|ref|YP_003390720.1| squalene/phytoene synthase [Spirosoma linguale DSM 74]
 gi|283820083|gb|ADB41921.1| Squalene/phytoene synthase [Spirosoma linguale DSM 74]
          Length = 278

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 93/292 (31%), Gaps = 26/292 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
             +F++ +L   + +         L        + + +  +Y F      + DT  +   
Sbjct: 2   MALFNKTALECSKLITEQYSTSFTLGIKTLDRKFHLPIYAIYGFVRYADEIVDTFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           + + L++  D +++  +     S++P       +V +Y + ++     +++   D Y   
Sbjct: 62  KTLLLRFKHDTYQAIEE---GISLNPILQSFQLVVNEYKIEHELIEAFLKSMEMDLYYQD 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY---AGIAQFIGQLICQLPIH 189
             D K ++ Y +  +  +  +   +      +   R+       G A      +  L   
Sbjct: 119 Y-DAKGYKEYIYGSAEVVGLMCLRVFCEGDLAEFDRLRGAACKLGSAFQKVNFLRDLKSD 177

Query: 190 Y-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +  RG+ YFP       G++ +  +                    +   +A   +  +  
Sbjct: 178 FVDRGRTYFPGVDFKDFGVEAKRLIEADI---------------QQDFDEAYIGIMNLPR 222

Query: 249 DVFP-AFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
                 ++     +++    +     +I           +   +  + +K R
Sbjct: 223 GARMGVYLAYIYYQTLFNKIKQLSATRIQRERVRVPNPQKFALLAQTYVKYR 274


>gi|238026964|ref|YP_002911195.1| Phytoene synthase [Burkholderia glumae BGR1]
 gi|237876158|gb|ACR28491.1| Phytoene synthase, putative [Burkholderia glumae BGR1]
          Length = 279

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 77/278 (27%), Gaps = 5/278 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   + +L+ L+  H EL        +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSVYYALRQAPYASQAALTALFALHRELDDTARETSDPTVGQTKLAWWR 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P S+ L                + +    D       D      
Sbjct: 65  KELAALAA---GQPSHPVSLALAKHAAAIAQDGAALQTLADGFAMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYS-ASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
           Y  R+      L         +  A+       G A  + + +  +      G++Y P+D
Sbjct: 122 YVERVGGAFALLVARASAGAAWPGAATSWAPALGNALTLARFVEDVGHDARHGRVYLPID 181

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSIT 260
            L    +     +  +     +  ++         L +A   +             ++  
Sbjct: 182 ELQRYAVTAADLMHRRYGPAFTELMRFQTARARAALHEALAAIPPAERRAQRTLRALAAL 241

Query: 261 ESVL-KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                   +   ++++        + + W    ++ ++
Sbjct: 242 ALATLDEIERDDYQVLHQRIALTPIRKLWVAWRAARRR 279


>gi|167725487|ref|ZP_02408723.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei DM98]
          Length = 250

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 78/240 (32%), Gaps = 7/240 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             YLA  + P   R ++  +Y F   +  + D       R  +L  W+   +    G   
Sbjct: 16  SFYLAMRILPAEQRDAMFQVYAFCRAVDDIADEGGARAERAAQLDRWRADIDDCYAGKPR 75

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            S+ P + E    + ++ L    F  MI+    D+  D    D    + Y  R++S    
Sbjct: 76  ASLVPLARE----IGKFGLHRDDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGR 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  I           +  + G A  +  ++  +       + Y P ++L   G+     
Sbjct: 132 LSVRIFGMPDEPG-RVLSHHLGRALQLTNILRDIDDDAAINRCYLPRELLAREGIAIADP 190

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHG 271
            +      +        E  L +  +A   M       V    I       +L   +N G
Sbjct: 191 QTIARDPLLPRVCATLVERALHHFAQADAVMDASPRAQVRAPRIMSGAYRLILAETRNRG 250


>gi|253999128|ref|YP_003051191.1| squalene synthase HpnC [Methylovorus sp. SIP3-4]
 gi|253985807|gb|ACT50664.1| squalene synthase HpnC [Methylovorus sp. SIP3-4]
          Length = 283

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 91/270 (33%), Gaps = 5/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESST 88
               +  +A +L P   R  +  +Y F  +     D     P  R   L  +K   +   
Sbjct: 17  AHYENFPVASVLLPMRLRRPIGVIYSFARQADDFADEGDHTPEQRLALLDGFKQELDLIA 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +G      + F V L   ++++ LP Q F D+++A   D       +  +   Y  R ++
Sbjct: 77  QGNT--PNTTFFVTLADTIKRHTLPLQPFYDLLDAFSQDVVKSRYENFGEVMDYCRRSAN 134

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +  +     ++ +      +  +   +  + I Y + ++YFPLD +    ++
Sbjct: 135 PVGRLLLHLYQAAT-PRNIGLSDAICSSLQLINFLQDVEIDYKKDRIYFPLDEMRKYRIE 193

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP-VSITESVLKHA 267
            +   +  +S    L ++       + L       + +           ++  E +L+  
Sbjct: 194 EKQIANADSSGTWGLFMEFQINRARRLLQSGAPLGKALSGRTGLEMRTIIAGGERILQKL 253

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                 + +             +  +   K
Sbjct: 254 HKSRGDMFTQRPVLKPHDWALMLYKAVRAK 283


>gi|296809772|ref|XP_002845224.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238842612|gb|EEQ32274.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 405

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 95/353 (26%), Gaps = 71/353 (20%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +  LR  D   Y      P         L+  +  L  + +T        MR
Sbjct: 54  LESAHNYCVELLRKYDRPSYTLSTFIPRHSTKFYIALHALNVSLSMIPETTSAYTIGLMR 113

Query: 77  LQWWKDIFESSTKGLIAESISPFSVEL------LSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           LQ+W+D    +  G   +      +        +    +  +   + + +I A      +
Sbjct: 114 LQFWRDTITRALAGTPPKEPIAILLASALSDLDMRTHGKAKISKGWVMRLINAREQHLTH 173

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI-- 188
               +    E YA    S L++L    L          +  + G A  I  L+  +P+  
Sbjct: 174 SPYPNLASLESYAESTYSTLLYLTLSALPLTSL-TVDHLASHIGKAAGITALLRGVPLVA 232

Query: 189 ----------------------HYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAI 225
                                    +G +  PLDI+   G+  E     G ++  +  A+
Sbjct: 233 FPTPPNHHSSQTRIGNEGPVAGDSRQGSIMLPLDIMAQAGVKEEDVFRHGADAPGLRDAV 292

Query: 226 KIFAELGLKYLFKAREEMRYILP------------------------------------- 248
              A     +L  AR+ ++ +                                       
Sbjct: 293 FTVATRASDHLITARQMLKNLRAGKDVGHAFEHEGEEGHEYHDSHDQQAKKSTLATQLQE 352

Query: 249 --DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               F   +P   T   L   Q   F I            PW    +  ++ F
Sbjct: 353 VERGFGVLLPAVSTSLWLNKLQKVDFDIFKQELLSTDWKLPWKAYWAYQRREF 405


>gi|296157821|ref|ZP_06840655.1| Squalene/phytoene synthase [Burkholderia sp. Ch1-1]
 gi|295892067|gb|EFG71851.1| Squalene/phytoene synthase [Burkholderia sp. Ch1-1]
          Length = 292

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 30/273 (10%), Positives = 76/273 (27%), Gaps = 5/273 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    E         +P     +L WW+
Sbjct: 23  EYCQQKAAPPGSSTYYALRQAPAASQPLLTALFALRREFEETVKETSDPTIGRTKLAWWQ 82

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +   +           P S  L + +            ++     D       D      
Sbjct: 83  NEIAALA---SDSPSHPVSKALAAYLPDVKDEYPALQTLLAGFEMDLDQARYLDYPNLRR 139

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   +      L       +   A        G A  + Q + +       G++Y P+D 
Sbjct: 140 YVQGVGGTFASLVARATAKDAAQA-SIWSAPLGEALMLAQFVVETGHDARHGRIYIPIDE 198

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           +    +     ++ + ++  +  ++   +     L  A   +               ++ 
Sbjct: 199 MQRFNVTAADLINRKYTEAFTELMRFETKRARDALQSALGAVPGSERRTQRTLVAQAALA 258

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            ++L   +  G+ ++        + + W    +
Sbjct: 259 SALLDEIERDGYHVLHQRIALTPIRKLWIAWRA 291


>gi|326402291|ref|YP_004282372.1| putative squalene/phytoene synthase [Acidiphilium multivorum
           AIU301]
 gi|325049152|dbj|BAJ79490.1| putative squalene/phytoene synthase [Acidiphilium multivorum
           AIU301]
          Length = 290

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 8/260 (3%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y    + P   R ++  +Y F   +  + D       +   L  W+   ++    L  
Sbjct: 27  SFYRGMSVLPAPRRTAMYAIYTFCRIVDDIADEEAPLAAKREGLDAWRRRIDA----LPE 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYAFRISSRLIH 152
               P +  L     +Y L  + F  +I+    D+    I  D    + Y  R++S +  
Sbjct: 83  GGDDPVTRLLRDASLRYALRREDFHAIIDGMEMDAGAPIIAPDMATLDLYCDRVASAVGR 142

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  +   E  +   RV  + G A  +  ++  +     RG++Y P + L A      + 
Sbjct: 143 LSIRV-FGEVSAQGDRVAHHLGRALQLTNILRDVGEDAARGRIYLPREALEAA-DAAANP 200

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            +      +  A+   A L  ++  +A   MR        PA +       +L   +  G
Sbjct: 201 ATLLADPGLKRAMAEIAGLAEQHFAEAAAAMRGCDRRAVLPARMMADAYRPLLGVMRAAG 260

Query: 272 FKIVSHSHTPNQLVRPWYML 291
           F       +     +     
Sbjct: 261 FAHPERRPSLPAWRKLRLAA 280


>gi|296446018|ref|ZP_06887968.1| Squalene/phytoene synthase [Methylosinus trichosporium OB3b]
 gi|296256536|gb|EFH03613.1| Squalene/phytoene synthase [Methylosinus trichosporium OB3b]
          Length = 297

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/293 (19%), Positives = 113/293 (38%), Gaps = 7/293 (2%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
               +   + +     + +R+ D D +LA L +P   R  L  +  F  E+  VR     
Sbjct: 5   PTHSDAELAENYRRCEKLVREQDIDLWLATLFAPAQARPHLHAIGAFAVEVAGVRAKTSQ 64

Query: 70  PITRDMRLQWWKDIFESSTKGLIAE-----SISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P+  +MRL+WW D  E+  +    E        P +  L+  + +  +  +  + ++EAH
Sbjct: 65  PLLGEMRLRWWYDALEAPGEAGAGEESGGARAHPIADALIDTLDRRAIAREEVVRLLEAH 124

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
            FD Y++ +   +  E Y   +    +      +D+E  +     ++ AG A  +  ++ 
Sbjct: 125 VFDLYDEPMETMEALETYCDNVFGAPMRWRAAAIDAEDAARQDEALRSAGRAAGLAWVMR 184

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            LP H   GQ + P +++       E F   + +     A+   +     +   AR  +R
Sbjct: 185 SLPRHIALGQRFVPAELMARHR-AEEDFAHARATPTTRAALAELSARARAHYETARRSIR 243

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                   A +P ++    L+  +   +        P Q  R W +  ++   
Sbjct: 244 D-DGAARAALLPAALVPLYLRPMEGAAYDPFRPPAPPAQWRRQWRLWRAARSG 295


>gi|303314471|ref|XP_003067244.1| hypothetical protein CPC735_017000 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106912|gb|EER25099.1| hypothetical protein CPC735_017000 [Coccidioides posadasii C735
           delta SOWgp]
          Length = 390

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/347 (15%), Positives = 101/347 (29%), Gaps = 62/347 (17%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
             +  F     + +  L+  D   Y      P         L   +  L  + D+  NP 
Sbjct: 47  NSKAEFESAQKYCIELLQKYDRPSYTLSTFIPRHTLNFYIALRALNVSLSLIPDSTSNPT 106

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEA 123
              MRLQ+W+D    +  G       P ++ L   +         +  +   +   +I A
Sbjct: 107 IGLMRLQFWRDTITKTLAGTP--PKEPIAILLAHSLSSLDARTKGKARISKGWLTRLINA 164

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                 N    +    + YA    S L++L   +L          +  + G A  I  ++
Sbjct: 165 REQPLTNTPYTNIAALDQYAENTYSTLLYLTLSVLPLTSL-TVDHLASHIGKAAGITSIL 223

Query: 184 CQLPIHY---------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRI 221
             LP+                        +G +  PLD++    L  E     G ++  +
Sbjct: 224 RGLPLVAFPPPPNHHSNQDPLGGPGGSTRQGHITLPLDVMAQTRLKEEDVFRQGADAPGL 283

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILP-----------------------------DVFP 252
             A+   A     +L  AR+ ++ +                                 F 
Sbjct: 284 RDAVFAVATRASDHLITARQMLQNLRAGKDVGHDFEHEGEEGHEYYGHEPAADDVERGFG 343

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +P   T+  L   Q   F I            PW    +  +++F
Sbjct: 344 VLMPAVSTQLWLDKLQKVDFDIFKPELLSTDWKLPWKAYLAFQRRKF 390


>gi|149061061|gb|EDM11671.1| similar to F23N19.9 (predicted), isoform CRA_b [Rattus norvegicus]
          Length = 246

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 83/235 (35%), Gaps = 22/235 (9%)

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D+        MR+Q+W+   E            P ++EL                     
Sbjct: 34  DSVSEKTIGLMRMQFWRKAVEDMFCDNP--PHQPVAMELW-------------------K 72

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             +  + +    ++ E YA    S L++L   +L  +   A      + G AQ I   + 
Sbjct: 73  EKNLDDKAYRSIRELETYAENTQSSLLYLTLEVLGVKDVHA-DHAASHIGKAQGIVTCLR 131

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
             P H  R Q++ P+D+    G+ +E FL       +   +   A     +L  AR    
Sbjct: 132 ATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHS 191

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +  + FPAF+     E  LK  Q   F I   S      + P  +   S +KR+
Sbjct: 192 RVPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNTLLPLSLYIQSWRKRY 246


>gi|313201229|ref|YP_004039887.1| squalene synthase hpnc [Methylovorus sp. MP688]
 gi|312440545|gb|ADQ84651.1| squalene synthase HpnC [Methylovorus sp. MP688]
          Length = 283

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 91/270 (33%), Gaps = 5/270 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESST 88
               +  +A +L P   R  +  +Y F  +     D     P  R   L  +K   +   
Sbjct: 17  AHYENFPVASVLLPMRLRRPIGVIYSFARQADDFADEGDHTPEQRLALLDGFKQELDLIA 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +G      + F V L   ++++ LP Q F D+++A   D       +  +   Y  R ++
Sbjct: 77  QGNT--PNTAFFVTLADTIKRHALPLQPFYDLLDAFSQDVVKSRYENFGEVMDYCRRSAN 134

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +  +     ++ +      +  +   +  + I Y + ++YFPLD +    ++
Sbjct: 135 PVGRLLLHLYQAAT-PRNIGLSDAICSSLQLINFLQDVEIDYKKDRIYFPLDEMRKYRIE 193

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP-VSITESVLKHA 267
            +   +  +S    L ++       + L       + +           ++  E +L+  
Sbjct: 194 EKQIANADSSGTWGLFMEFQINRARRLLQSGAPLGKALSGRTGLEMRTIIAGGERILQKL 253

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                 + +             +  +   K
Sbjct: 254 HKSRGDMFTQRPVLKPHDWALMLYKAVRAK 283


>gi|238505840|ref|XP_002384122.1| phytoene synthase, putative [Aspergillus flavus NRRL3357]
 gi|220690236|gb|EED46586.1| phytoene synthase, putative [Aspergillus flavus NRRL3357]
          Length = 348

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 96/327 (29%), Gaps = 31/327 (9%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           VL     N    +K F       +  L       Y+   +    +RI L  LY F     
Sbjct: 22  VLARFVTNKYHPDKQFVASLRKAVDRLAASSQSMYMGSAMFQGPFRIDLILLYSFFRVAD 81

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGL--------IAESISPFSVELLSIVRQYDLP 113
            + D +++  +  M ++    + E+               E+  P   EL++ +    + 
Sbjct: 82  DLVDESQDTESARMIIEQCDQLLEAKFSHPELFPFSPGYQEAKHPAPPELIAAIDSLPVS 141

Query: 114 N---QYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSERYS 164
               ++   +IE    D                  + YA+ ++S +      ++      
Sbjct: 142 RLRLEHLKGLIEGFRTDLTFSAKPGSFPFVTESDLDTYAYHVASSVAASMLGLVVHHFPD 201

Query: 165 ASLRVI-----------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
               +            +  G       +   +       ++Y P   L   GL  E  L
Sbjct: 202 HQFAINVFLRRRVVDAGERMGQTLQYINVARDIARDAAINRVYLPTTWLKQQGLGPEDVL 261

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNH-G 271
           +     R+ L      +        AREEM+++  +V   F+        +    +    
Sbjct: 262 ASPTDSRLELVRDRLLDRAEFLSASAREEMKFLPDEVQGPFLATVDSYLEIGAALRRGMR 321

Query: 272 FKIVSHSHTPNQLVRPWYMLSS-SIKK 297
            + +          R W    + + +K
Sbjct: 322 PRTLDDKLRLPLGTRLWVAYRAMAWRK 348


>gi|83815220|ref|YP_445554.1| phytoene synthase [Salinibacter ruber DSM 13855]
 gi|294507437|ref|YP_003571495.1| Phytoene synthase [Salinibacter ruber M8]
 gi|83756614|gb|ABC44727.1| phytoene synthase [Salinibacter ruber DSM 13855]
 gi|294343765|emb|CBH24543.1| Phytoene synthase [Salinibacter ruber M8]
          Length = 307

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 90/271 (33%), Gaps = 5/271 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
            + R       LA  L P   ++S++ LY +   +  + D     + R+  LQ  + + +
Sbjct: 18  ESFRYHSRTFSLAAYLLPRSVQMSVATLYLYCRRVDSIADQRVLEVGRERALQEVRQVRD 77

Query: 86  SSTKGLIAESISP--FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
              + L     +       L  +  Q  LP     ++IE   +D     +        Y+
Sbjct: 78  RLDETLAGRPPAETVLWRRLAEVHEQSSLPRGPMYELIEGALWDLEGRPVVSKADLIEYS 137

Query: 144 FRISSRLIHLA-TMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDI 201
             +   +  +    + D ER+       +  GIA  I  ++  +        ++Y P   
Sbjct: 138 NLVGGSVGAMMLPFLADPERHDELEPAARKLGIAMQITNIVRDVGEDIDELDRVYLPEHW 197

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
           L    +  E+   G+ +D     ++   E   +    + E +  +             + 
Sbjct: 198 LDEHNVSVEALQQGRVADGYPALLEAAMEAAEQRYVDSFEGVAALPFRSRYGIRAAARMY 257

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
             ++   + + +  +      +   + + +L
Sbjct: 258 REIMNEVRANDYDNLGRRAYVSFRRKLFLLL 288


>gi|90415701|ref|ZP_01223635.1| CrtB phytoene synthase [marine gamma proteobacterium HTCC2207]
 gi|90333024|gb|EAS48194.1| CrtB phytoene synthase [marine gamma proteobacterium HTCC2207]
          Length = 303

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 83/268 (30%), Gaps = 9/268 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            + L       Y A L          + LY F   +  + D   +   R   L+  +   
Sbjct: 7   KQVLARNGKSFYWASLFLGSELADRAARLYQFCRFVDDLADG--DLPDRLDSLEDIRAGL 64

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                   A +  P     +++  + ++P +   ++++    D +  ++    +   Y  
Sbjct: 65  IDP--QHPAIATIPELEAFIALAGEANIPLKAAGELLDGMLRDQHPTALETEAELLRYCH 122

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            ++  +  +   +L+ +   A    I   GIA  +  +   +       + Y P +    
Sbjct: 123 AVAGTVGLMMCRVLNCQHPRADSFAID-LGIAMQLTNIARDVLEDAKMDRRYLPANWFD- 180

Query: 205 VGLDRESF--LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITE 261
             L  E+    +      ++  I    EL  +Y   A   +  +         + + +  
Sbjct: 181 APLSPETIAMAANNCHLPVAAGINQLLELADRYYASALIGIHLLPWRSRFSIIVALRVYG 240

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
            +    +  G +        N++ +   
Sbjct: 241 QIGHQLKRGGLQWWRGRTVVNKITKARL 268


>gi|148259138|ref|YP_001233265.1| squalene/phytoene synthase [Acidiphilium cryptum JF-5]
 gi|146400819|gb|ABQ29346.1| Squalene/phytoene synthase [Acidiphilium cryptum JF-5]
          Length = 290

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 8/260 (3%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y    + P   R ++  +Y F   +  + D       +   L  W+   ++    L  
Sbjct: 27  SFYRGMSVLPAPRRTAMYAIYTFCRIVDDIADEEAPLAAKREGLDAWRRRIDA----LPE 82

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI-FDCKQFEHYAFRISSRLIH 152
               P +  L     +Y L  + F  +I+    D+    I  D    + Y  R++S +  
Sbjct: 83  GGDDPVTRLLRDASLRYALRREDFHAIIDGMEMDAGAPIIAPDMATLDLYCDRVASAVGR 142

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L+  +   E  +   RV  + G A  +  ++  +     RG++Y P + L A      + 
Sbjct: 143 LSIRV-FGEVSAQGDRVAHHLGRALQLTNILRDVGEDAARGRIYLPREALEAA-DAAANP 200

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHG 271
            +      +  A+   A L  ++  +A   MR        PA +       +L   +  G
Sbjct: 201 ATLLADPGLKRAMAEIAGLAEQHFAEAAAAMRGCDRRAVLPARMMADAYRPLLGVMRAAG 260

Query: 272 FKIVSHSHTPNQLVRPWYML 291
           F       +     +     
Sbjct: 261 FAHPERRLSLPAWRKLRLAA 280


>gi|114776341|ref|ZP_01451386.1| putative phytoene synthase-like protein [Mariprofundus ferrooxydans
           PV-1]
 gi|114553171|gb|EAU55569.1| putative phytoene synthase-like protein [Mariprofundus ferrooxydans
           PV-1]
          Length = 304

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 70/229 (30%), Gaps = 5/229 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PI 71
           +    ++     L   R+   +   A  L     R +++ +Y F      + D     P 
Sbjct: 7   QSMQLAQAYQHCLDTARNHYENFPTASKLLRADLRPAVAAIYAFARHADDLADEGDATPA 66

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
           TR  +L  W+ + E   K    +      + L   +R+  LP +   ++I A   D    
Sbjct: 67  TRLKQLDAWEILLERCEKDSNID--HAVFMALGDAIRKRQLPVEELYNLIIAFRMDVTLH 124

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
           +     +   Y    ++ +  L   +       A          A  +      L I   
Sbjct: 125 AYGSMDELLFYCRHSANPVGRLMLALHGIHSAEA-KHYSDQICTALQLINFWQDLSIDLK 183

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKA 239
           +G+ Y P + L    L  E+ L  Q    R               L + 
Sbjct: 184 KGRCYIPGEWLALHDLTTEALLEAQVDEPRFQPVFLHALAATRAILHQG 232


>gi|312889768|ref|ZP_07749314.1| Squalene/phytoene synthase [Mucilaginibacter paludis DSM 18603]
 gi|311297694|gb|EFQ74817.1| Squalene/phytoene synthase [Mucilaginibacter paludis DSM 18603]
          Length = 277

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 27/278 (9%), Positives = 78/278 (28%), Gaps = 25/278 (8%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
                     L        +R ++  +Y F      + DT  +     +   + K+    
Sbjct: 15  ITNKYSTSFSLGIKAFDKRFRYAIYAIYGFVRYADEIVDTFYDYNQAQLISDFRKET--- 71

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                   S++P       +V QY +        + +   D    +  + + ++ Y +  
Sbjct: 72  FLAIEQGISLNPVLQSFQCVVNQYHIERDLIEAFLHSMEMDLQQTAY-NKEGYQMYIYGS 130

Query: 147 SSRLIHLATMILDS---ERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDIL 202
           +  +  +   +      + Y   L + +  G A      +  +   +  RG+ YFP    
Sbjct: 131 AEVVGLMCLNVFCEGDTDLYKKLLPMARSLGAAFQKINFLRDIRSDFEERGRTYFPGVDF 190

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITE 261
                        +                      A + ++ +        ++  +   
Sbjct: 191 TRF--TENDKQKIEAD-------------IQHDFDNALKGIKQLPGGTKRGVYVAYTYYL 235

Query: 262 SVLKHAQNHGFKI-VSHSHTPNQLVRPWYMLSSSIKKR 298
            + K  +     + +      + + +    L + +K++
Sbjct: 236 QLFKTIRKTPANVILQKRIRVSDVRKSALYLKAILKQK 273


>gi|297538618|ref|YP_003674387.1| squalene synthase HpnC [Methylotenera sp. 301]
 gi|297257965|gb|ADI29810.1| squalene synthase HpnC [Methylotenera sp. 301]
          Length = 300

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 95/299 (31%), Gaps = 18/299 (6%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR 68
           NTR +  + +               +  +A +  P   R  +  +Y F  +     D   
Sbjct: 8   NTRNDHHVINNSL----ELANSHYENFPVASVFLPQYLREPIGLIYSFARQADDFADEGD 63

Query: 69  -NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
            +   R   L  +++  E     +  +S   F   L ++++   LP   F D+++A   D
Sbjct: 64  LSIEQRLDLLNGFRNELELLQAYIKPKSS--FFAGLGAMIKAKKLPYDPFYDLLDAFSQD 121

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
                  D  +   Y  R ++ +  L   +   +  +A++++      A  I   +  + 
Sbjct: 122 VTKTRYADYDEVLDYCTRSANPIGRLLLHL-YGQSNTANIQLSDNICTALQIINFLQDIA 180

Query: 188 IHYHRG----QLYFPLDILGAVGLDRESFLS-----GQNSDRISLAIKIFAELGLKYLFK 238
           I + +     ++Y   D + A  +             +  +     I          L+ 
Sbjct: 181 IDFKKNDGKQRIYLCQDEMEAFNITESQIQDFVDGKQEIDENWQQFILFNLHRVNALLYS 240

Query: 239 AREEMRYILPDVFPAFIP-VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            +   R +   +       ++  E ++         I +   T N        L + +K
Sbjct: 241 GKPLGRILTGRIGFEMRMIIAGGERIIAKINKVNGDIFNFRPTLNYGDWLIIFLKALMK 299


>gi|289614684|emb|CBI58521.1| unnamed protein product [Sordaria macrospora]
          Length = 383

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 98/339 (28%), Gaps = 63/339 (18%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +   +    L+  DY+ +L     PP  R + S L   + EL R+ +T  N     MR
Sbjct: 50  VEKARQYCENQLKHGDYEAFLLRQFVPPSSRNAYSALRTLNLELARLPETVSNTTIARMR 109

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLP---------NQYFLDMIEAHFFD 127
           + +W++   S   G       P S+ L   V+                + L +I      
Sbjct: 110 MSFWRETVNSVFAGNP--PREPISIVLHQAVQDLKARAGPSSASSLKFWLLCLINTREQH 167

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
             N         + YA    + L+++    +          +  + G A  I   +  +P
Sbjct: 168 MENRPFVSLNSLQDYAENTYATLMYMTLASMPLRSVH-MDHLASHIGKACGIVATLRGIP 226

Query: 188 IHY----------------HRGQLYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAE 230
           +                      L  PLD++   G+  E     G N++ +  A+   A 
Sbjct: 227 VLAAPSQPIQGPAGSVGNTRPPALLLPLDVMAEAGVREEDVFRRGPNAEGLQDAVFKVAT 286

Query: 231 LGLKYLFKAREEMRYIL-------------------------------PDVFPAFIPVSI 259
               +L  ARE ++ +                                   F   +    
Sbjct: 287 RANDHLITAREMLKNLKAGEEVGHDYEHEGEQEHVYSTGGTDTTQADIKRGFGVLLEAVP 346

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
               L+  +   F       +      PW +  +    +
Sbjct: 347 AADYLERLEKADFDPFKVKAS---WKLPWRLWRALKTHQ 382


>gi|209515911|ref|ZP_03264772.1| squalene synthase HpnC [Burkholderia sp. H160]
 gi|209503569|gb|EEA03564.1| squalene synthase HpnC [Burkholderia sp. H160]
          Length = 288

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 3/262 (1%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKGLI 92
           +  +A +L P   R  +  +Y        + +    +   R  RL  ++   ++  +   
Sbjct: 8   NFPIASVLLPKALRAPVGIIYQVVRTADDIANEGDWSAAERHARLADFRAGLDAIAQRRA 67

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
           A        +L  ++ QY LP + F D+++    D   +   D      Y  R +  + H
Sbjct: 68  APVDPLLFGKLAGVIAQYKLPLEPFYDLLDGCAQDIDTNRYADRAALVDYCRRSAHPVGH 127

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L   ++D+     +L        A  +      +   + R ++Y P   L   G+     
Sbjct: 128 LMLHLIDAATPH-NLADADAICTASQLISFWLDVAADWKRQRVYLPQADLQRFGVTEAQI 186

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHAQNHG 271
            +G   D     +          L +       +   +              L+  +   
Sbjct: 187 AAGVVDDAWRALMAHEIAFVRAMLIRGAPLALRMPGRLGFELCGAVQAGLRFLERIERAD 246

Query: 272 FKIVSHSHTPNQLVRPWYMLSS 293
           + +       N          +
Sbjct: 247 YDVFRERPVLNLFDWCVVAART 268


>gi|47214527|emb|CAG04547.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 237

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 90/235 (38%), Gaps = 3/235 (1%)

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D+        MR+Q+WK   E   +        P   EL   VR+++L  ++ L +I   
Sbjct: 6   DSVSQKTLGLMRMQFWKTTVEEIYRDEP--PSQPIGNELWRAVRKHNLTKRWLLRVITER 63

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             D  + +  + ++ E Y+    S LI+L    L  +   A      + G AQ I   + 
Sbjct: 64  ENDLDDRAYRNLQELEAYSENTQSSLIYLLLECLGVKDVHA-DHAASHIGKAQGIATCLR 122

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
             P H  R ++Y P+D+    G  +E F+       +   +   A     +L  AR    
Sbjct: 123 ATPYHSGRRKVYLPMDVCMLHGASQEDFIRSSRQQNVRDVVYDIASQAHVHLQHARSFST 182

Query: 245 YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +     PAF+   + E  L+  +   F +   S      + P  +   S KK +
Sbjct: 183 SVPAAACPAFLQTVVLEDYLQRVRRAHFDVFHPSLQARNPLLPLQLYLRSWKKTY 237


>gi|307103757|gb|EFN52015.1| hypothetical protein CHLNCDRAFT_27289 [Chlorella variabilis]
          Length = 380

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/320 (17%), Positives = 100/320 (31%), Gaps = 39/320 (12%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +   + +  ++  DY+ YL     P   R  +  L  F+ E   +   A++ +   MR
Sbjct: 63  IRKAFAYCVEQVKKHDYENYLWVTQLPKPLRAPIFALRAFNVETGLISQQAKSEMLVLMR 122

Query: 77  -LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS-YNDSIF 134
             QWW+D      KG       P    L  ++R   L       M+     D   +    
Sbjct: 123 CQQWWRDAVNDCFKGRP--PEQPVVTALAEVLRVVPLTRYRLQQMVSTREEDLLAHAQPA 180

Query: 135 DCKQFEHYAFRISSRLIHLATMI--------------------------------LDSER 162
             +  E YA   S +L+ L                                         
Sbjct: 181 SLEAVERYAEGTSGQLLLLQLEAARIGAGSAGAGGGSSSDDGSGSTPSSGSSPAGGGGGA 240

Query: 163 YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRIS 222
            +A+     + G A  I  L+        + ++Y P D+    G+  E  L+G++S  + 
Sbjct: 241 AAAAEHGAAHLGKAVGIVGLLRGTYALGSQRRVYLPADLCQRHGVGDEDVLAGRDSPGLR 300

Query: 223 LAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTP- 281
                 A    ++L  AR     + P   P F P       L+  +  GF +        
Sbjct: 301 DVTLAVASAAKQHLDDARRLAADVAPAARPLFAPAVAAAMYLQALEQAGFNLFDQRMLRG 360

Query: 282 --NQLVRPWYMLSSSIKKRF 299
             + L     +  + ++  +
Sbjct: 361 AFSPLAYQLRLKWALLRNSY 380


>gi|323137254|ref|ZP_08072333.1| Squalene/phytoene synthase [Methylocystis sp. ATCC 49242]
 gi|322397612|gb|EFY00135.1| Squalene/phytoene synthase [Methylocystis sp. ATCC 49242]
          Length = 270

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/275 (21%), Positives = 106/275 (38%), Gaps = 16/275 (5%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
                  LR+ D D +LACL +P   R  +  +Y F  E   VR     P+  +MRL+WW
Sbjct: 8   YAQCEALLRERDRDLWLACLFAPQPARQHIHAIYAFAIEARDVRAKVTQPLLGEMRLRWW 67

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
            D   +           P +  LL  + Q+ LP + F+ + +AH FD  +D +   +  E
Sbjct: 68  TDALTAQAAAGEGARAHPIADALLDTIAQFALPREEFVALADAHVFDLCDDPMPTLEALE 127

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y     +  +  A  IL +    A     + AG+A  + +++            + PLD
Sbjct: 128 DYCRATVAGPMRWAARILGAPASRAF----EEAGVALGLTRVLRAPA------GAFVPLD 177

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSIT 260
           +L     D        +S  +  A+         +  +AR E   +      A +P +  
Sbjct: 178 VLARHHADVH-----ADSPGLRAALAELRSTARAHYDEARREAATLS-AGREALLPAATV 231

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              L+      +  +  +  P+ L R W +  ++ 
Sbjct: 232 PLFLERMARKDYDPMRTAAEPSPLRRQWRLWRAAR 266


>gi|186475771|ref|YP_001857241.1| squalene/phytoene synthase [Burkholderia phymatum STM815]
 gi|184192230|gb|ACC70195.1| Squalene/phytoene synthase [Burkholderia phymatum STM815]
          Length = 302

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 79/277 (28%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    E         +P     +L WW+
Sbjct: 30  EYCQQKAAPPGSSTYYALRQAPVARQPLLTALFALRREFEETVKETTDPTIGRTKLAWWQ 89

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       E   P S  L + +            +I     D       D      
Sbjct: 90  KEAAALAA---GEPTHPVSQALAAHLPDVQAEYPALQGIIAGFEMDLDQARYLDYPNLRR 146

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   +      +       E   A        G A  + Q++ +L      G++Y P+D 
Sbjct: 147 YMAGVGGTFASVVARATAHEPSQA-ASWAAPLGEALMLAQIVVELGNDARHGRIYIPIDE 205

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE 261
           +    +     ++ + +D  +  ++         + KA + +             ++   
Sbjct: 206 MQRFNVTAADLINRKYTDAFTEMMRFQTARARDAIRKALDALPVGERHSQSTLRALAALA 265

Query: 262 SVL-KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
             L    +  G+ ++        + + W    ++ K 
Sbjct: 266 LALLDEIERDGYHVLHQRIALTPIRKLWVAWRAARKH 302


>gi|330793586|ref|XP_003284864.1| hypothetical protein DICPUDRAFT_148700 [Dictyostelium purpureum]
 gi|325085173|gb|EGC38585.1| hypothetical protein DICPUDRAFT_148700 [Dictyostelium purpureum]
          Length = 360

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 114/284 (40%), Gaps = 5/284 (1%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLS-PPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           + D  FV    +  D + YL  LL   P+ R     L  F+ E +    + ++     +R
Sbjct: 80  NADYNFVFERAKKFDKENYLCSLLISDPVARRVAYALRTFNVETVANDFSPKSEKISKIR 139

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQ+WKD   +   G + +   P +  L  ++++  L   +F+ ++     D  +  I D 
Sbjct: 140 LQFWKDAINNIYNGKVYD--QPLTRVLAQVIKEKKLSKTWFIRLLNRREKDVQSVQIKDM 197

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +  E YA  I + L+ L    L  +    +     + G A  I  LI     H    + Y
Sbjct: 198 EDLEQYADDIHTSLLLLTLEGLGIKGNHDAEHCASHLGKAVGIMVLIRGTIFHLGNRKTY 257

Query: 197 FPLDILGAVGLDRESFLSGQNS-DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
            P+ +    G++ E+   G    D++  AI   A     +L KA+   + +  +   AF 
Sbjct: 258 IPVSLTTKYGINTEALYRGDAQFDKMQNAIYEMASCAKLHLDKAKA-FKNLPENAHQAFY 316

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             +I E  L+  +   F I    +T       + +  + + K+F
Sbjct: 317 SAAIVEDFLERLRKVDFNIFEFHNTNQHPFLLFKLYKNKLFKQF 360


>gi|296283333|ref|ZP_06861331.1| phytoene synthase [Citromicrobium bathyomarinum JL354]
          Length = 336

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 77/269 (28%), Gaps = 9/269 (3%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD------TARNPITRDMRLQW 79
             + +       A  L     R  +  LY +      + D         +    + RLQ 
Sbjct: 35  EAIAEGSRSFAFASKLFDKATRERVWMLYAWCRRCDDLADAQEKGGELGDQAGIEDRLQA 94

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
            K +           +       L  +  +  +      ++I     D+   S    K+ 
Sbjct: 95  IKVLTRR--ALEGGATADVAFDALGQVAGEAGITLDMANEVIAGFAMDANGFSPHSEKEL 152

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y + ++  +  L   ++ +   S         G+A  +  +   +      G+ Y P 
Sbjct: 153 MRYCYHVAGAVGVLMARVMFAPNDSFIYDRACDLGLAFQLANVARDVIEDAAAGRCYLPD 212

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVS 258
           + L   GL RE++    N   ++       +    Y   +R   +++      A +    
Sbjct: 213 EWLEDAGLTRENYADEDNRFALAAVSARLVDRMEMYEVASRLGAKHLRFRQRWAVLSAAR 272

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
           I   + +  +  G              + 
Sbjct: 273 IYGVIGRKVRARGQLAWDTRTYVPWYEKL 301


>gi|148398|gb|AAA21264.1| prephytoene pyrophosphate synthase [Pantoea agglomerans]
          Length = 296

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 81/273 (29%), Gaps = 12/273 (4%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------NPITRDMRLQWWKD 82
                  A  L     R S+  LY +      V D           +  T + RL   + 
Sbjct: 4   GSKSFATASKLFDAKTRRSVLMLYSWCRHCDDVIDDQTLGFQTDQPSLQTPEQRLMQLEM 63

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               +  G       P       +   +D+   Y  D +E    D              Y
Sbjct: 64  KTRQAYAGSQMHE--PAFAAFQEVAMAHDIAPAYAFDHLEGFAMDVREAEYIQLDDTLRY 121

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
            + ++  +  +   I+     +   R     G+A  +  +   +    H G+ Y P   L
Sbjct: 122 CYHVAGVVGLMMAQIMGVRDNATLDRACD-LGLAFQLTNIARDIVEDAHVGRCYLPASWL 180

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITE 261
              GL++E++ + +N   +S   +   +    Y   A   +  +      A      +  
Sbjct: 181 ENEGLNKENYAAPENRQALSRIARRLVQEAEPYYLCATAGLAGLPLRSAWAIATAKQVYR 240

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +    +  G +   H  +     +   +L +S
Sbjct: 241 KIGVKVEQAGTEAWDHRQSTTTPEKLSLLLMAS 273


>gi|222110337|ref|YP_002552601.1| squalene synthase hpnc [Acidovorax ebreus TPSY]
 gi|221729781|gb|ACM32601.1| squalene synthase HpnC [Acidovorax ebreus TPSY]
          Length = 296

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 81/274 (29%), Gaps = 8/274 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
               +  +A LL PP  R  ++ +Y F      + D         +  L+ ++   +S  
Sbjct: 24  THYENFPVASLLCPPRLRPPIAAIYAFARTADDIADEGTATAAERLADLRAYRAELQSVA 83

Query: 89  K-GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY----NDSIFDCKQFEHYA 143
                    +     L +++R + LP     D+++A   D        +  D      Y 
Sbjct: 84  AGHSPQTRWAAVFGPLQAVLRSHQLPVPLLDDLLDAFMQDVTLTEAGATYADRAALLDYC 143

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R ++ +  L   +       A LR       A  +      L +   RG+ Y       
Sbjct: 144 RRSANPVGRLLLHLYGVHGQDA-LRESDAICTALQLINFWQDLSVDLPRGRHYLTDADCA 202

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
           A G+ R    + + S      +   A      + +    +  +   V      V      
Sbjct: 203 AHGVARADLAAQRRSAASDRLVLDCAAWARALMLQGSPLVHRLPGRVGWELRLVVQGGLR 262

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +L   Q      +        L  P  +  ++  
Sbjct: 263 ILDKVQALDGASLLTRPRLGTLDWPRMLARAARM 296


>gi|67515523|ref|XP_657647.1| hypothetical protein AN0043.2 [Aspergillus nidulans FGSC A4]
 gi|40746206|gb|EAA65362.1| hypothetical protein AN0043.2 [Aspergillus nidulans FGSC A4]
 gi|259489770|tpe|CBF90315.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 392

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/339 (16%), Positives = 101/339 (29%), Gaps = 63/339 (18%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             + L  L   D   Y      P   R +   L   ++ L  + DT  +     MRLQ+W
Sbjct: 53  QKYCLNLLAKYDRPSYTLSTFIPSQARPAYIALRALNSTLSLIPDTTSSHTIGLMRLQFW 112

Query: 81  KDIFESSTKGLIAESISPFSVE------LLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           ++    +  G   +      +             +  L   +   MI A      ND   
Sbjct: 113 REAIAKTLTGSPPKEPIAILLASAIEDLHHRSGGRAKLSKNWLNRMINAREQTLTNDPYP 172

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH----- 189
           + +  E YA    S L++L   +L     +A   V  + G A  I  ++  LPI      
Sbjct: 173 NLEALESYAENTYSTLLYLTLSVLPMTSVTA-DHVASHIGKAAGIAAVLRGLPIVAFPAQ 231

Query: 190 -----------------YHRGQLYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAEL 231
                              +G +  PLD++   G+  E     G  ++ +  A+   A  
Sbjct: 232 TQSATSAGDSMAALQGGAKQGAVMLPLDVMAQAGVKEEEVFRRGAEAEGLRDAVFTVATR 291

Query: 232 GLKYLFKAREEMRYILP---------------------------------DVFPAFIPVS 258
              +L  A++ +  +                                     F  F+P  
Sbjct: 292 ASDHLITAQQMLSNLRAGQNVGHDYEHEGEEDHQYSVEEGRHESQLDEVNRAFGVFMPAV 351

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            T   L   ++  F I       +    PW    +  ++
Sbjct: 352 GTRLWLDKLESLDFDIFRPELLRSDWKLPWKAYLAFQRR 390


>gi|72536070|gb|AAZ73137.1| phytoene synthase [Enterobacteriaceae bacterium DC404]
          Length = 308

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 76/279 (27%), Gaps = 12/279 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
                  +         A  L     R S   LY +      V D              T
Sbjct: 6   LEHASATMTAGSKSFATASKLFDKRTRRSALMLYTWCRYCDDVIDGQVVGFAAPTEQSDT 65

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            + RLQ  + +   +  G   +   P       +   + +P     D +E +  D  N+ 
Sbjct: 66  PEARLQRLRKMTRRAYDGETMQE--PPFAAFQEVALAHAIPPTQAFDHLEGYAMDVRNER 123

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
            +       Y + ++  +  +   ++      A+L      GIA  +  +   +      
Sbjct: 124 YYSLDDTLRYCYHVAGVVGLMMARVMGVRD-EATLDRACDLGIAFQLTNIARDIVDDAQV 182

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P   L  VGL+ ++     N   ++            Y   A   +  +      
Sbjct: 183 GRCYLPQQWLAEVGLNEQTCTVRANRPALARLAARLVTEAEPYYQSALAGLGDLPLRSAW 242

Query: 253 AFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           A      +   +       G K         +  +   +
Sbjct: 243 AIATAHGVYREIGVKVLMAGEKAWDTRQGTTRAEKLALV 281


>gi|326387683|ref|ZP_08209289.1| farnesyl-diphosphate farnesyltransferase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207729|gb|EGD58540.1| farnesyl-diphosphate farnesyltransferase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 314

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 88/281 (31%), Gaps = 10/281 (3%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR------NPITRDMR 76
                +R        A  L     R  +  LY +      + D         +  +   R
Sbjct: 10  HAAATIRAGSKSFAAASRLFDRATRERVWLLYAWCRRCDDLIDGQDLGGAMRDQASVTQR 69

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           ++  ++    +  G+  E+  P    L  + R+  L      D++     D+      + 
Sbjct: 70  MEEVRERTARAFSGI--ETGDPAFDCLAMVARETGLTPAMADDVLAGFALDATGWQPRNE 127

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSA-SLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                Y + ++  +  +  +++  +   A +L      G+A  +  +   L       + 
Sbjct: 128 TDLMRYCWHVAGAVGVMMAVVMGVDPDDAETLERAGDLGMAFQLANIARDLAEDNAAQRC 187

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P + L    +     L     + +++  +    +   +   AR   R +      A +
Sbjct: 188 YLPAEWLAEADIPPGEELKPPYRNALAVMARRLCRIATAHECSARIGARRLRVRQRWAIL 247

Query: 256 PVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             + I   + +     G          ++  + W++  S++
Sbjct: 248 AAAGIYGEIARIVTRRGAAAWDRRAVVDKKRKLWWIARSAV 288


>gi|156974448|ref|YP_001445355.1| phytoene synthase [Vibrio harveyi ATCC BAA-1116]
 gi|156526042|gb|ABU71128.1| hypothetical protein VIBHAR_02163 [Vibrio harveyi ATCC BAA-1116]
          Length = 304

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 90/281 (32%), Gaps = 18/281 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
               +L     L +       A  L         + LYYF   +  + D+  N       
Sbjct: 1   MENTALKC---LSNHGKTWRFASFLLSKQQVEQAARLYYFCRCIDDIADSTANKQLAFES 57

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+  +            +S  PF  + L +  Q D+P  +   ++     D  +  I   
Sbjct: 58  LEEVQRQLSL------GKSDEPFVDDFLQLSSQLDIPVMHAFTLVRGVQSDIDSVLIQSE 111

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   YA+R++  +  +   IL ++       +    GIA  +  +   +      G+ Y
Sbjct: 112 CELIQYAYRVAGVVGLMMCPILKADNKGMPYAI--DLGIALQLTNIARDVLEDAEMGRRY 169

Query: 197 FPLDILGAVGLDRESFLSGQ---NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
            P        +  E   S +       +S AI     L  +Y   AR+  +++ P    A
Sbjct: 170 LPYQWCP---IAPEDIASDEGESVRTTVSDAIVRLLTLADQYYTSARQGYQFLPPPSRRA 226

Query: 254 FIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            I   S+   +    +  G +            +    +S+
Sbjct: 227 IIVAESVYRQIGVKLRKRGLQYWKGRTVVTPFSKVAVAMSA 267


>gi|89074631|ref|ZP_01161096.1| phytoene synthase [Photobacterium sp. SKA34]
 gi|89049569|gb|EAR55129.1| phytoene synthase [Photobacterium sp. SKA34]
          Length = 305

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 79/264 (29%), Gaps = 20/264 (7%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            +         Y A L     +      LY F   L  + D   N  +   +L  ++   
Sbjct: 22  HKVTAKHGKTFYFASLFMGKRHAERSYCLYQFCRYLDDLADNQGNSSS---KLNQFRQRL 78

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
             +             +        ++LP    LD+I+   FD     I    +   Y +
Sbjct: 79  IEN-----KTERDTVFL-----TESFELPINPILDLIDGFLFDQNEPVIDSKSELLTYCY 128

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           R++  +  +    L+ +  +A    +   GIA  +  +   +      G+ Y P   L  
Sbjct: 129 RVAGTVGIMMCHALEVDDRAAFKYAVD-LGIAMQLTNIARDVFEDAQLGRRYVPSTWL-- 185

Query: 205 VGLDRESFLSGQNSD-RISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITES 262
            G+         +    I  A +    L  +Y       + Y+        +I     ++
Sbjct: 186 HGITPLEIEQAPSHHCDIFHARRKLLLLAEQYYSSGMSGLSYLPKQSRLSIYIAAKCYQA 245

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVR 286
           +    +       +   T + + +
Sbjct: 246 IGFQIEREPD--FTVRSTVSMIKK 267


>gi|325526241|gb|EGD03864.1| squalene/phytoene synthase [Burkholderia sp. TJI49]
          Length = 277

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 80/277 (28%), Gaps = 5/277 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P      L+ L+    EL        +P     +L WW 
Sbjct: 5   DYCQQKAAPEGSSVYYALRQAPLAAAPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       +   P +  L                ++  +  D       D    + 
Sbjct: 65  KELAALAA---GQPTHPVTKALAQHHPSIAAEADALCALVNGYGMDLEQARYLDYANLQR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++             + +           G A  + Q + +L      G++Y P+D 
Sbjct: 122 YISQVGGT-FAALVARASAAQPGNPQSWADDVGRALMLAQFVQELGNDARHGRIYLPIDE 180

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSIT 260
           L    +     L+ + S   +  ++       + L  A   +              +++ 
Sbjct: 181 LQRYDVTAADLLNRRYSPAFTELLQFQTARAREALTAAEAAIPAAERRAQRTLRAQLALA 240

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            ++L   +  G++++        + + W    ++ ++
Sbjct: 241 HALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR 277


>gi|331697461|ref|YP_004333700.1| squalene synthase HpnD [Pseudonocardia dioxanivorans CB1190]
 gi|326952150|gb|AEA25847.1| squalene synthase HpnD [Pseudonocardia dioxanivorans CB1190]
          Length = 310

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 81/298 (27%), Gaps = 16/298 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL----MRVRD 65
           +R+                R+   + Y    L PP  R +L  +Y     +         
Sbjct: 2   SRRPSTALELAYARTEAITREQARNFYYGIRLLPPAKRSALCAVYALARRIDDIGDGDAG 61

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                  +   L   ++    + +    ++     V +    R+Y +P   F ++++   
Sbjct: 62  GDPGTEAKLAALGRVRESVRRAREQDP-DASDAVLVAVTDAARRYPIPLGAFDELVDGVE 120

Query: 126 FDSYND-------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQF 178
            D   D                 Y  +++  +  L   I  S     +       GIA  
Sbjct: 121 ADVRMDDVPGESAPYATFDDMVGYCRQVAGSVGRLCLGIFGSRPDPRAPGFADALGIALQ 180

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSG---QNSDRISLAIKIFAELGLKY 235
              ++  +      G++Y P + L    +D      G     +  ++  I+  A    ++
Sbjct: 181 QTNILRDIREDLQNGRIYLPTEELARFDVDLRLDEHGNLVDKTGGLAELIRFSAARAREW 240

Query: 236 LFKAREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                  +  +             I   +L         +     + +   +    + 
Sbjct: 241 YADGLRLVPLLDRRSAACATAMAGIYRQLLDDIAADPPSVYHQRRSLSGRQKIGVAVK 298


>gi|325107152|ref|YP_004268220.1| Phytoene synthase [Planctomyces brasiliensis DSM 5305]
 gi|324967420|gb|ADY58198.1| Phytoene synthase [Planctomyces brasiliensis DSM 5305]
          Length = 308

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 92/296 (31%), Gaps = 15/296 (5%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-------- 67
             +    + +R  R       L+ L+ P     ++  LY F      + D          
Sbjct: 8   TLAESYDYGVRITRQSGSSFRLSFLMLPRRDYQAMCVLYAFMRLTDDLADAPLVSLQPID 67

Query: 68  ---RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
               +   R   L+ W++   +       E   P    L  +V  Y +  ++  D+I   
Sbjct: 68  LPTADAEPRPAMLERWREQLLACL--TREEDTHPLHPALRDVVTNYAINPEWLYDVITGV 125

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
            FD     +      + Y + ++  +      I  ++        ++  G A  +  ++ 
Sbjct: 126 EFDLAPQQLATFNDLQRYCYLVAGTVGLCCQAIWRADLSQTHDLAVQ-CGEAFQLTNILR 184

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +     RG+ Y   + L A GL           +     I+   +       +ARE  +
Sbjct: 185 DIREDAERGRCYLAAEDLQAAGLTETQLHGRDLPEGFIPLIEQHIQRARDGYDRARELEQ 244

Query: 245 YILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++       F I      S+L   +             +   R   +L++  ++ F
Sbjct: 245 HLRGAGKRMFRIMFKTYSSLLSEIERDPQACFYRRIRISGRRRVAILLTAPHRRLF 300


>gi|297203849|ref|ZP_06921246.1| squalene synthase HpnC [Streptomyces sviceus ATCC 29083]
 gi|197711903|gb|EDY55937.1| squalene synthase HpnC [Streptomyces sviceus ATCC 29083]
          Length = 300

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 77/272 (28%), Gaps = 14/272 (5%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------------ARNPITRDMR 76
           +    +  +A    P  +R  L  +Y F   +  + D               +P   + R
Sbjct: 19  KAAAENFPVAPFFLPKDWRTDLMAVYGFARLVDDIGDGDLAPGGADARLLGVSPAEAEDR 78

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L           +    E   P    L   VR+  L  + FL +I A+  D         
Sbjct: 79  LVLLDAFEADLHRVFSGEPRHPLLRRLRPTVRRRALTPEPFLGLIAANRQDQLVTRYETY 138

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y    ++ +  L   +  +               A  I + +  +     R ++Y
Sbjct: 139 DDLLAYCELSANPVGRLVLAVTGTSTPERVRL-SDAICTALQIVEHLQDVAEDLGRDRIY 197

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI- 255
            P   +    +      +      +   +   A+   + L +    +  +   +      
Sbjct: 198 LPAADMKRFHVQEADLATKTAGASVRALVAYEAQRARELLNEGAPLVGSVHGRLKLLLAG 257

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            V+   + L+      + ++  S  P +L   
Sbjct: 258 FVAGGRAALRAITAAEYDVLPGSPKPGKLQLL 289


>gi|325559609|gb|ADZ30891.1| phytoene synthase [MoClo level 2 destination vector pL2-1]
 gi|325559620|gb|ADZ30899.1| phytoene synthase [MoClo end-linker vector pELR-1]
          Length = 296

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 80/273 (29%), Gaps = 12/273 (4%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------NPITRDMRLQWWKD 82
                  A  L     R S+  LY +      V D              T + RL   + 
Sbjct: 4   GSKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFQARQPALQTPEQRLMQLEM 63

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               +  G       P       +   +D+   Y  D +E    D              Y
Sbjct: 64  KTRQAYAGSQMHE--PAFAAFQEVAMAHDIAPAYAFDHLEGFAMDVREAQYSQLDDTLRY 121

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
            + ++  +  +   I+     +   R     G+A  +  +   +    H G+ Y P   L
Sbjct: 122 CYHVAGVVGLMMAQIMGVRDNATLDRACD-LGLAFQLTNIARDIVDDAHAGRCYLPASWL 180

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITE 261
              GL++E++ + +N   +S   +   +    Y   A   +  +      A      +  
Sbjct: 181 EHEGLNKENYAAPENRQALSRIARRLVQEAEPYYLSATAGLAGLPLRSAWAIATAKQVYR 240

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +    +  G +      +     +   +L++S
Sbjct: 241 KIGVKVEQAGQQAWDQRQSTTTPEKLTLLLAAS 273


>gi|315042017|ref|XP_003170385.1| hypothetical protein MGYG_07629 [Arthroderma gypseum CBS 118893]
 gi|311345419|gb|EFR04622.1| hypothetical protein MGYG_07629 [Arthroderma gypseum CBS 118893]
          Length = 403

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 100/351 (28%), Gaps = 73/351 (20%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +  LR  D   Y      P         L+  +  L  + +T        MR
Sbjct: 54  LESAHNYCVELLRKYDRPSYTLSTFIPRHSTKFYIALHALNVSLSMIPETTSAHTIGLMR 113

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDS 128
           LQ+W+D    +  G       P ++ L S +         +  +   + + +I A     
Sbjct: 114 LQFWRDAITRTLAGTP--PKEPIAILLASALSDLDTRTQGRAKISKGWLMRLINAREQHL 171

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            + S       E YA    S L++L    L     +A   +  + G A  I  L+  +P+
Sbjct: 172 AHTSYPTLASLESYAESTYSTLLYLNLSALPLNSLTA-DHLASHIGKAVGITALLRGVPL 230

Query: 189 ------------------------HYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISL 223
                                      +G +  PLDI+   G+  E     G ++  +  
Sbjct: 231 VAFPPPPSHLSSQTRMSNEGPVAGDSRQGSIMLPLDIMAQTGVKEEDVFRLGADAPGLRD 290

Query: 224 AIKIFAELGLKYLFKAREEMRYILP----------------------------------- 248
           A+   A     +L  AR+ ++ +                                     
Sbjct: 291 AVFTVATRASDHLITARQMLKNLRAGQDVGHAFEHEGEEGHEYQDDQHTKSTSLITQLQE 350

Query: 249 --DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
               F  F+P   T   L   Q   F I            PW    +  ++
Sbjct: 351 IERGFGVFLPAVSTNLWLNKLQKLDFDIFKPELLSTDWRLPWKAYWAYRQR 401


>gi|317053953|ref|YP_004117978.1| phytoene synthase [Pantoea sp. At-9b]
 gi|316951948|gb|ADU71422.1| Phytoene synthase [Pantoea sp. At-9b]
          Length = 312

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 72/272 (26%), Gaps = 12/272 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
                + +         A  L     R S   LY +      V D            P  
Sbjct: 6   MEHATQTMAVGSTSFATAAKLFDASTRRSTLMLYAWCRHCDDVIDGQTLGASDTPTTPEE 65

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            + R+       E+      A    P       +   + +P Q   D +E    D     
Sbjct: 66  AEARMA--HLQLETRRAYSGASMDEPAFAAFQEVALMHRIPPQLAFDHLEGFNMDVQQQR 123

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               +    Y + ++  +  +   ++        L      G+A  +  +   +      
Sbjct: 124 YLRFEDTLRYCYHVAGVVGLMMARVMGVRD-ERVLDHACDLGLAFQLTNIARDIVDDAQH 182

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           G+ Y P + L  +GL  ++    Q+   +++           Y   A   +  +      
Sbjct: 183 GRCYLPEEWLHPLGLRADNVAEAQHRPALAILAARLVAEAEPYYQSALAGLPGLPLRSAW 242

Query: 253 AFIPV-SITESVLKHAQNHGFKIVSHSHTPNQ 283
           A      +   +    Q  G +        ++
Sbjct: 243 AIATAQGVYREIGIKVQQAGAQAWDSRQHTSK 274


>gi|5912296|emb|CAB56063.1| phytoene synthase [Paracoccus marcusii]
          Length = 304

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 82/277 (29%), Gaps = 13/277 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQW 79
             +         A  L PP  R     LY +      V D                RL  
Sbjct: 10  EAITQGSQSFATAAKLMPPGIRDDTVMLYAWCRHADDVIDGQALGSRPEAVNDPQARLDG 69

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
            +   ++         ++P    L ++ R++D P  + +D+IE    D            
Sbjct: 70  LRA--DTLAALQGDGPVTPPFAALRAVARRHDFPQAWPMDLIEGFAIDVEARDYRTLDDV 127

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y++ ++  L  +   ++    +    R     G+A  +  +   +  +   G+ Y P 
Sbjct: 128 LEYSYHVAGILGVMMARVMGVRDHPVLDRACD-LGLAFQLTHIARDVIDYARIGRCYLPG 186

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVS 258
           D L   G   +       S  +   I    +    Y   AR  +  + P   +       
Sbjct: 187 DWLDHAGARVD---GPVPSPELYTVILRLLDAAEPYYPSARVGLADLPPRCAWSIPAAFR 243

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           I  ++    +  G +      + ++  +   +     
Sbjct: 244 IYRAIGLPIRKGGPEAYRQRISTSKAAKIGLLGIGGW 280


>gi|295835549|ref|ZP_06822482.1| squalene synthase HpnC [Streptomyces sp. SPB74]
 gi|197699442|gb|EDY46375.1| squalene synthase HpnC [Streptomyces sp. SPB74]
          Length = 309

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 79/275 (28%), Gaps = 18/275 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR------------ 76
           +    +  +A    P  +R  L  +Y F   +  + D    P   D R            
Sbjct: 26  KAGAENFPVAPFFVPASWRADLMAVYGFARLVDDIGDGDLAPGGADARYLDVPEDQADDR 85

Query: 77  ---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L   +       +        P    L   VR+  L  + F  +I A+  D      
Sbjct: 86  LVLLDALETDLARVFRS-TGTPHHPLLRALRPTVRRRGLVPEPFEALIGANRQDQKVGRY 144

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y    ++ +  L   +  +E     LR          + + +  +     R 
Sbjct: 145 ATWDELAAYCELSANPVGRLVLGLTGTESDE-RLRRSDAVCTGLQLVEHLQDVAEDLRRD 203

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + +    +      +   + R+   I   A+     L +    +  +   +   
Sbjct: 204 RVYLPAEDMTRFRVTEADLAAPHANARVRALIAFEADRARALLDEGLPLVASVRGRLRLL 263

Query: 254 FI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
               V+   + L      G  +++ +  P +    
Sbjct: 264 LAGFVAGGRAALDAIAGTGNDVLATTPKPTKARLL 298


>gi|506623|gb|AAA19428.1| phytoene synthase [Neurospora crassa]
          Length = 601

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 94/334 (28%), Gaps = 44/334 (13%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 268 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 325

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI----------------SPFSVELLSIV 107
            D A++               +   K   A                    P + + L ++
Sbjct: 326 VDDAKSRREVLSWTAKLNHFLDLHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALHLL 385

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSI------------FDCKQFEHYAFRISSRLIHLAT 155
             + LP +   D+I+    DS                  D K  E+YA  ++  +  L  
Sbjct: 386 PTHILPPKPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCI 445

Query: 156 MILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
            ++                       GIA     +   + +    G++Y P   L   GL
Sbjct: 446 ALIIYHCLPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGL 505

Query: 208 DRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLK 265
             +  L        I    +   E   +    AR EM+ I  +     I       ++ +
Sbjct: 506 THKMVLENPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAVENYMAIGR 565

Query: 266 HA-QNHGFKIV---SHSHTPNQLVRPWYMLSSSI 295
              +     +        T  +  R   +L +  
Sbjct: 566 VLRERKEGTVFVRMEGRATVPKRRRLSTLLRALY 599


>gi|319763668|ref|YP_004127605.1| squalene synthase hpnc [Alicycliphilus denitrificans BC]
 gi|330824067|ref|YP_004387370.1| squalene synthase HpnC [Alicycliphilus denitrificans K601]
 gi|317118229|gb|ADV00718.1| squalene synthase HpnC [Alicycliphilus denitrificans BC]
 gi|329309439|gb|AEB83854.1| squalene synthase HpnC [Alicycliphilus denitrificans K601]
          Length = 292

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 8/274 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFESST 88
               +  +A LL PP  R  ++ +Y F      + D    +P  R   L  ++    S T
Sbjct: 20  THYENFPVASLLCPPRLREPITAIYAFARAADDIADEGQASPGERLADLHAYRAELHSIT 79

Query: 89  KGL-IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----IFDCKQFEHYA 143
            G       +     L + +R + LP     D+++A   D           D      Y 
Sbjct: 80  AGCLPGPRWAFVFGPLQATLRSHRLPVALLDDLLDAFMQDVAMTRDGATHADRAALLDYC 139

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R ++ +  L   +      +A LR       A  +      L +   RG+ Y       
Sbjct: 140 RRSANPVGRLLLHLYGVHGDAA-LRESDAICSALQLINFWQDLSVDLPRGRHYLADADCA 198

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
           A G+ R    + + +      +   A      + +    +  +          V      
Sbjct: 199 AYGVARADLAALRRTSASDRLVLDCAAWARGLMLQGAPLVHRLPGRAGWELRLVVQGGLR 258

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +L   Q  G   ++             +  +   
Sbjct: 259 ILDKVQALGGASLTARPRLGAPDWLRMLARAVRM 292


>gi|118594188|ref|ZP_01551535.1| Phytoene synthase [Methylophilales bacterium HTCC2181]
 gi|118439966|gb|EAV46593.1| Phytoene synthase [Methylophilales bacterium HTCC2181]
          Length = 299

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 27/245 (11%), Positives = 69/245 (28%), Gaps = 23/245 (9%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-----ARNPITRDMRLQWW 80
           + ++      + A L         +  +Y F   +  + D        +   + +   W 
Sbjct: 6   KIMQKHGKTFFWASLFLKGSEAKKIYSIYAFCRNVDDIVDERNKVTQSDYDLKKIINSWR 65

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           K+  +S  +       +              +      +       D       +  +  
Sbjct: 66  KNSNDSIYQSFYEGKKNLL-----------KVEKAVLEEFYNGQESDVLQVQPINISELL 114

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y +R++  +  +    L+     +        GIA  +  +   +     + ++Y P  
Sbjct: 115 VYCYRVAGVVGLMVCNALNI-NDKSMRFYAIDLGIAMQLTNIARDIYEDAQKERIYLPKS 173

Query: 201 ILGAVGLDRESFLSGQNSDR--ISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIP 256
           ++G +G   E+ L     +R  I+ A     +    Y   A   +  +          I 
Sbjct: 174 LVGKIG--AETLLKPSKPERLLINNARDNLIKKAEIYYESALNGIDSLPNASTQRAVRIA 231

Query: 257 VSITE 261
             +  
Sbjct: 232 ARLYR 236


>gi|327396568|dbj|BAK13989.1| phytoene synthase CrtB [Pantoea ananatis AJ13355]
          Length = 296

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 81/273 (29%), Gaps = 12/273 (4%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------NPITRDMRLQWWKD 82
                  A  L     R S+  LY +      V D              T + RL   + 
Sbjct: 4   GSKSFATASKLFDAKTRRSVLMLYAWCRHCDDVIDDQTLGFQARQPALQTPEQRLMQLEM 63

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
               +  G       P       +   +D+   Y  D +E    D              Y
Sbjct: 64  KTRQAYAGSQMHE--PAFAAFQEVAMAHDIAPAYAFDHLEGFAMDVREAQYSQLDDTLRY 121

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
            + ++  +  +   I+      A+L      G+A  +  +   +    H G+ Y P   L
Sbjct: 122 CYHVAGVVGLMMAQIMGVRD-KATLDRACDLGLAFQLTNIARDIVDDAHAGRCYLPASWL 180

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITE 261
              GL++E++ + +N   +S   +   +    Y   A   +  +      A      +  
Sbjct: 181 EHEGLNKENYAAPENRQALSRIARRLVQEAEPYYLSATAGLARLPLRSAWAIATAKQVYR 240

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +    +  G +      +     +   +L++S
Sbjct: 241 KIGVKVEQAGQQAWDQRQSTTTPEKLTLLLAAS 273


>gi|115387361|ref|XP_001211186.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195270|gb|EAU36970.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 399

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 101/343 (29%), Gaps = 69/343 (20%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            + +  L   D   Y      P   +     L   +  L  + DT  +     MRLQ+W+
Sbjct: 59  RYCVELLSKYDRPSYTLSSFIPRHAQPFYLALRALNVSLSMIPDTTSSYTIGLMRLQFWR 118

Query: 82  DIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDSYNDSI 133
           D    +  G       P ++ L S +         +  +   +   MI A      ND  
Sbjct: 119 DAVAKTLSGSP--PKEPIAILLASAISDLHDRTQGRARISKGWLNRMINAREQTLTNDPY 176

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH---- 189
            D    E YA    S L++L    L     +A   V  + G A  I  ++  LP+     
Sbjct: 177 PDLAALESYAENTYSTLMYLTLSALPMTSVTA-DHVASHIGKASGIAAVLRGLPLVAFPP 235

Query: 190 ----------------YHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELG 232
                             +G +  PLD++   G+  E     G ++  +  A+   A   
Sbjct: 236 PPSHQPTQSTGIMTGGAKQGAVMLPLDVMAQAGVKEEDVFRQGADAPGLRDAVFTVATRA 295

Query: 233 LKYLFKAREEMRYILP-------------------------------------DVFPAFI 255
             +L   ++ +  +                                         F  F+
Sbjct: 296 SDHLITVQQMLSNLRAGRDVGHDFEHEGEEGHEYGSEHDVSGQRPETPLDEVNRAFGVFM 355

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           P   T   L   ++  F I       ++   PW    +  +K 
Sbjct: 356 PAVATRLWLDKLESFDFDIFRPELLRSEWKLPWKAYMAYSRKT 398


>gi|327402936|ref|YP_004343774.1| Squalene/phytoene synthase [Fluviicola taffensis DSM 16823]
 gi|327318444|gb|AEA42936.1| Squalene/phytoene synthase [Fluviicola taffensis DSM 16823]
          Length = 278

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 26/287 (9%), Positives = 75/287 (26%), Gaps = 25/287 (8%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           S          +       +         +  +  +Y F      + D+       D+  
Sbjct: 7   SLSLDMSAMTTKRYSTSFSMGVQCLSKDLQAPIHAIYGFVRFADEIVDSFHEYNKEDLLA 66

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           ++  + +++  +     S++P        V +Y +  +     +++   D    +     
Sbjct: 67  EFKAETYKAIER---GISLNPILNSFQWTVNKYQIDPELIEVFLQSMEMDLQTTTYE-QT 122

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKY---AGIAQFIGQLICQLPIHYHR-G 193
            +E Y    +  +  +   +          ++       G A      +  L   Y++ G
Sbjct: 123 VYEQYILGSAEVVGLMCLKVFVRGNTETYNQLKDSAMKLGSAFQKINFLRDLHADYYQLG 182

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-P 252
           + YFP                           K   +          E ++ +  D    
Sbjct: 183 RTYFPEMNFDLFDC---------------NMKKKIEQEIELDFQAGYEGIKKLPKDTRFG 227

Query: 253 AFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKR 298
            +I       +    +    + I+          +   + +S ++  
Sbjct: 228 VYIAYRYYIKLFHKIRKTEAEIILGERIRIPNNKKVRLLFTSYLRHN 274


>gi|254262162|emb|CAZ90491.1| Phytoene synthase crtB [Enterobacter turicensis]
          Length = 308

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 75/279 (26%), Gaps = 12/279 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARNPIT 72
                  +         A  L     R S   LY +      V D              T
Sbjct: 6   LEHASATMTAGSKSFATASKLFDKRTRRSALMLYTWCRYCDDVIDGQVAGFAAPTEQSDT 65

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            + RLQ  + +   +  G   +   P       +   + +P     D +E +  D  N+ 
Sbjct: 66  PEARLQRLRKMTRRAYDGETMQE--PPFAAFQEVALAHAIPPTQAFDHLEGYAMDVRNER 123

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
            +       Y + ++  +  +   ++      A+L      GIA  +  +   +      
Sbjct: 124 YYSLDDTLRYCYHVAGVVGLMMARVMGVRD-EATLDRACDLGIAFQLTNIARDIVDDAQV 182

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            + Y P   L  VGL+ ++     N   ++            Y   A   +  +      
Sbjct: 183 ERCYLPQQWLAEVGLNEQTCTVRANRPALARLAARLVTEAEPYYQSALAGLGDLPLRSAW 242

Query: 253 AFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           A      +   +       G K         +  +   +
Sbjct: 243 AIATAHGVYREIGVKVLMAGEKAWDTRQGTTRTEKLALV 281


>gi|90580461|ref|ZP_01236267.1| phytoene synthase [Vibrio angustum S14]
 gi|90438370|gb|EAS63555.1| phytoene synthase [Vibrio angustum S14]
          Length = 305

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 20/264 (7%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            +         Y A L     +      LY F   L  + D   N  +   +L  ++   
Sbjct: 22  HKVTAKHGKTFYFASLFMGKRHAERSYCLYQFCRYLDDLADNQGNSSS---KLNQFRQRL 78

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
             +             +        ++LP    LD+I+   FD    +I   ++   Y +
Sbjct: 79  IEN-----KTERDTVFLT-----ESFELPINPILDLIDGFLFDQNEPAIDSKRELLTYCY 128

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           R++  +  +    L+ +  SA    I   GIA  +  +   +      G+ Y P + L  
Sbjct: 129 RVAGTVGIMMCHALEVDDRSAFKYAID-LGIAMQLTNIARDVFEDAQLGRRYVPSNWL-- 185

Query: 205 VGLDRESFLSGQNSD-RISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITES 262
            G+         +    I  A K    L  +Y       + Y+        +I     ++
Sbjct: 186 HGMTPLEIEQAPSHHCDIFYARKKLLSLAEQYYSSGMSGLSYLPKQSRLSIYIAAKCYQA 245

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVR 286
           +    +       +   T +   +
Sbjct: 246 IGFQIEREPD--FTVRATVSMAKK 267


>gi|289157788|gb|ADC84425.1| phytoene synthase [Vibrio campbellii]
          Length = 304

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 91/281 (32%), Gaps = 18/281 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
               +L     L +       A  L    +    + LYYF   +  + D+  N       
Sbjct: 1   MENTALKC---LSNHGKTWRFASFLLSKQHVEQAARLYYFCRCIDDIADSTANKQLAFES 57

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L+  +            +S  PF  + L +  Q D+P  +   ++     D  +  I   
Sbjct: 58  LEEVQRQLSL------GKSDEPFVDDFLQLSSQLDIPVMHAFTLVRGVQSDIDSVLIQSE 111

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   YA+R++  +  +   IL ++       +    GIA  +  +   +      G+ Y
Sbjct: 112 CELIQYAYRVAGVVGLMMCPILKADNKGMPYAI--DLGIALQLTNIARDVLEDAEMGRRY 169

Query: 197 FPLDILGAVGLDRESFLSGQ---NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
            P        +  E   S +       +S AI     L  +Y   AR+  +++ P    A
Sbjct: 170 LPYQWCP---IAPEDIASDEGESVRTTVSDAIVRLLTLADQYYTSARQGYQFLPPPSRRA 226

Query: 254 FIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            I   S+   +    +  G +            +    +S+
Sbjct: 227 IIVAESVYRQIGVKLRKRGLQYWKGRTVVTPFSKVAVAMSA 267


>gi|297155999|gb|ADI05711.1| squalene/phytoene synthase [Streptomyces bingchenggensis BCW-1]
          Length = 330

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 89/311 (28%), Gaps = 36/311 (11%)

Query: 21  SLFVLRNLRDIDYDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTARNP--------- 70
                  L    ++ + +A    P  +R  L  +Y +   +  + D    P         
Sbjct: 19  QEAARAVLDKAAHENFPVAPFFLPRAWRADLMAIYGYARLVDDIGDGDLPPGGSDAELLG 78

Query: 71  ------ITRDMRLQWWKDIFESST------------------KGLIAESISPFSVELLSI 106
                     M L  ++                           +  +   P    L   
Sbjct: 79  LDRDRADDPLMMLDAFEKDLWRVFGEPGGTGGASGTGGAAGTGSVSPDPRHPLLRALRPT 138

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
           VR++ LP + FL +IEA+  D         +    Y    ++ +  L   +  +      
Sbjct: 139 VRRHRLPPEPFLGLIEANRQDQRVRRYETYEDLLGYCELSANPVGRLVLGVTGTTSPERV 198

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
            R       A  I + +  +     R ++Y P + + + G+      +      +   I 
Sbjct: 199 RR-SDSICTALQIVEHLQDVAEDLRRDRVYLPAEDMKSFGVTEADLAAPTAGAPVRALIA 257

Query: 227 IFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
             A      L +    +  +   +       V+   + L+     G+ ++     P +L 
Sbjct: 258 HEAARAETLLNEGTPLVGSVHGRLKWLLAGFVAGGRAALRAVAAAGYDVLPGPPRPTKLS 317

Query: 286 RPWYMLSSSIK 296
               + ++  +
Sbjct: 318 LLREVGATLRR 328


>gi|15899619|ref|NP_344224.1| phytoene synthetase (crtB) [Sulfolobus solfataricus P2]
 gi|284176122|ref|ZP_06390091.1| phytoene synthetase (crtB) [Sulfolobus solfataricus 98/2]
 gi|13816274|gb|AAK43014.1| Phytoene synthetase (crtB) [Sulfolobus solfataricus P2]
 gi|261601362|gb|ACX90965.1| Squalene/phytoene synthase [Sulfolobus solfataricus 98/2]
          Length = 277

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 83/262 (31%), Gaps = 13/262 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
               +      Y +    P   R  ++ LY F      + D+    I     L+    + 
Sbjct: 6   EEIFKKGSVTYYNSSYFFPKKIREDVTKLYAFVRVFDDLVDSVPQKIEEYYNLRKLYQLE 65

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           +S          +      + + R+    + +    ++A   D Y    +  ++   Y +
Sbjct: 66  KSGYNT-----GNIVLQNFVELARRKGFEDSWIDAFLDAMESDIYKKVYYSIEELLKYMY 120

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +  +      I   + ++ S+   +  G A      I  +    + G+ Y P++ +  
Sbjct: 121 GSAEVVGLFMMKI--LDLHNDSMYYARMLGRAMQFLNFIRDVQEDLYLGRQYLPVEDMEK 178

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESV 263
            G+D       + ++     I+       ++  +A +  ++I    + P      + +  
Sbjct: 179 FGID-----KMECNEGFIEFIRYEISRYFEFEREAEKGFKFIPARYLVPIKTASEMYKWS 233

Query: 264 LKHAQNHGFKIVSHSHTPNQLV 285
               +     ++S    P +  
Sbjct: 234 ALRIKKSPCIVLSKKVKPRRTK 255


>gi|261189611|ref|XP_002621216.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239591452|gb|EEQ74033.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239613017|gb|EEQ90004.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
 gi|327356948|gb|EGE85805.1| phytoene/squalene synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 391

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 96/345 (27%), Gaps = 73/345 (21%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
                  D   Y      P         L   +  L  + DT   P    MRLQ+W+D  
Sbjct: 50  QARAEKYDRPSYTLSTFLPRHTLSFYLALRALNISLSMIPDTTSTPTIGLMRLQFWRDTI 109

Query: 85  ESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
             +  G       P ++ L S +         Q  +   +F+ MI +      N      
Sbjct: 110 TKTLAGKP--PKEPIAILLASALSDLDARTGGQARISKGWFMRMINSREQYLTNTPYTSL 167

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY------ 190
              E YA    S L++L    L     +A   +  + G A  I  ++  +P+        
Sbjct: 168 SALESYAENTYSTLLYLTLSALPLTSVTA-DHLASHIGKAAGISTVLRGIPLIAFPPPPN 226

Query: 191 --------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKY 235
                           G +  PLDI+   GL  E     G  +  +  A+   A     +
Sbjct: 227 HHSNQAGVAGGSGPRTGAITLPLDIMAETGLKEEDVFRHGAEAPGLRDAVFTVATRASDH 286

Query: 236 LFKAREEMRYILP-----------------------------------------DVFPAF 254
           L  AR+ ++ +                                             F   
Sbjct: 287 LITARQMLKNLRAGQDVGHDFEHEGEEGHEYHNHSNGSGGSDVSASNVQLEEVERAFGVL 346

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +P   T   L   Q   F I       +    PW    ++ ++ F
Sbjct: 347 MPAVSTSLWLDRLQAVDFDIFKPELRTSDWRLPWKAYWANRRRTF 391


>gi|323526054|ref|YP_004228207.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1001]
 gi|323383056|gb|ADX55147.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1001]
          Length = 278

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 78/276 (28%), Gaps = 7/276 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ LY    E         +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSIYYALRQAPAASQPRLTALYALRREFEETVKEVSDPAIGRTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +   +           P S  L + +            ++     D       D      
Sbjct: 65  NELGALA---SGAPTHPVSKALTATLPDVKAEYPALQALLSGFEMDLDQARYLDYPNLRR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
           Y   +      L          +   +        G A  + QL+ +       G++Y P
Sbjct: 122 YVQTVGGTFAGLVARAASKAVPTDGTQAPAWSAPLGDALLLAQLVVETGNDARHGRIYIP 181

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPV 257
           +D +    +     ++ + +D  +  ++   +     L  A   +               
Sbjct: 182 IDEMQRFNVTAADLINRKYTDAFTELMRFQTKRARDALHAALAAVPGRERRSQRTLLAQG 241

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           ++  ++L+  +  G+ ++        + + W    +
Sbjct: 242 ALALALLEEIERDGYHVLHQRIALTPIRKLWIAWRA 277


>gi|585750|sp|P37295|PSY_NEUCR RecName: Full=Phytoene synthase; AltName: Full=Protein albino-2
 gi|38567321|emb|CAE76609.1| geranylgeranyl-diphosphate geranylgeranyltransferase (AL-2)
           [Neurospora crassa]
          Length = 602

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 94/334 (28%), Gaps = 44/334 (13%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 269 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI----------------SPFSVELLSIV 107
            D A++               +   K   A                    P + + L ++
Sbjct: 327 VDDAKSRREVLSWTAKLNHFLDLHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALHLL 386

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSI------------FDCKQFEHYAFRISSRLIHLAT 155
             + LP +   D+I+    DS                  D K  E+YA  ++  +  L  
Sbjct: 387 PTHILPPKPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCI 446

Query: 156 MILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
            ++                       GIA     +   + +    G++Y P   L   GL
Sbjct: 447 ALIIYHCLPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGL 506

Query: 208 DRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLK 265
             +  L        I    +   E   +    AR EM+ I  +     I       ++ +
Sbjct: 507 THKMVLENPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAVENYMAIGR 566

Query: 266 HA-QNHGFKIV---SHSHTPNQLVRPWYMLSSSI 295
              +     +        T  +  R   +L +  
Sbjct: 567 VLRERKEGTVFVRMEGRATVPKRRRLSTLLRALY 600


>gi|121611283|ref|YP_999090.1| squalene/phytoene synthase [Verminephrobacter eiseniae EF01-2]
 gi|121555923|gb|ABM60072.1| Squalene/phytoene synthase [Verminephrobacter eiseniae EF01-2]
          Length = 309

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 80/274 (29%), Gaps = 8/274 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
               +  +A LL P   R  ++ +Y F      + D    P    +  L  ++   ++  
Sbjct: 37  THYENFPVASLLCPAPLRQPIAAIYAFARTADDIADEGDAPAASRLADLAAYQADLQAIA 96

Query: 89  KGLIAESISP-FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----IFDCKQFEHYA 143
           + L      P   V L + +R   LP     D++ A   D           D  +   Y 
Sbjct: 97  RDLPPSPRWPGVFVPLRAWLRSRHLPLPLLADLLSAFVQDVEKTRDGAGYADRAELLDYC 156

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R ++ +  L   +      + SL+       A  +      L +   RG+ Y P     
Sbjct: 157 RRSANPVGRLLLHLYRVTD-ARSLQESDAICTALQLTNFWQDLSLDIPRGRYYLPRADCA 215

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
           A G+     L+   + + +  I    +     +      +  +          V      
Sbjct: 216 AHGVSPAQLLALHGTPQSARLIADCIDWARACMHGGAPLVHRLPGRAGWELRLVVQGGLR 275

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +L        + +      +       +  + + 
Sbjct: 276 ILDKLDALQGRNLRIRPRLHARDWWGMIGRALVM 309


>gi|225561717|gb|EEH09997.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 409

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 101/361 (27%), Gaps = 78/361 (21%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +  F     + L  LR  D   +      P         +   +  L  + DT   P   
Sbjct: 52  KSEFESSHKYCLDLLRKYDRPSFTLSAFIPRQTLSFYLAVRALNVSLSMIPDTTSTPTIG 111

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQ--------YDLPNQYFLDMIEAHF 125
            MRLQ+W+D    +  G       P ++ L S + +          +   +FL MI +  
Sbjct: 112 LMRLQFWRDTITRTLAGQP--PKEPIAILLASALSELDTRTGGQARISKGWFLRMINSRE 169

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
               N         E YA    S L++L    L     +A   +  + G A  I  ++  
Sbjct: 170 QYLTNTPYTSISALESYAENTYSTLLYLTLSALPLTSVTA-DHLASHIGKAAGISTVLRG 228

Query: 186 LPIHY-------------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSD 219
           +P+                             G +  PLD++   GL  E     G  + 
Sbjct: 229 IPLIAFPAPPNHHSNQPGGLGGGAGGGSGARVGTITLPLDVMAETGLKEEDVFRHGAEAP 288

Query: 220 RISLAIKIFAELGLKYLFKAREEMRYILP------------------------------- 248
            +  A+   A     +L  AR+ ++ +                                 
Sbjct: 289 GLRDAVFTVATRASDHLITARQMLKNLRAGQGVGHDFEHEGEEGHEYNDVSSNGNGGDMS 348

Query: 249 ----------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                       F   +P   T   L   Q   F I            PW    ++ ++ 
Sbjct: 349 TSSAQLAEVERSFGVLMPAVSTSLWLDRLQAVDFDIFKPELRTFDWRLPWKAYWANRRRA 408

Query: 299 F 299
           F
Sbjct: 409 F 409


>gi|256424593|ref|YP_003125246.1| squalene/phytoene synthase [Chitinophaga pinensis DSM 2588]
 gi|256039501|gb|ACU63045.1| Squalene/phytoene synthase [Chitinophaga pinensis DSM 2588]
          Length = 275

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 82/287 (28%), Gaps = 26/287 (9%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F R S    +   +       L   L    Y   +  +Y F      + D+      
Sbjct: 2   KALFDRVSAACSKLTTKAYSTSFSLGIRLLAGKYHAPIYGIYGFVRFADEIVDSFHEYPK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +   + +  + +    +   S++P       +V QY +  +     +++   D +   
Sbjct: 62  AALLKDFREQTYRAIEDRI---SLNPILNSFQQVVHQYHIEQELIDTFLDSMEMDLHQHF 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSAS---LRVIKYAGIAQFIGQLICQLPIH 189
                 +E Y    +  +  +   +     +++           G A      +  +   
Sbjct: 119 Y-TRSIYEKYILGSAEVVGLMCLKVFTDGNHASYEQLKYPAMKLGAAFQKVNFLRDVRTD 177

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
               G+ YFP   L                     AI+   E       +A E ++ +  
Sbjct: 178 SQELGRHYFPQINLNNFSCQD------------KAAIEAEIE---CDFNEALEGIKALPM 222

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSS 293
                 ++  +    +    +N   + I++         +   ML +
Sbjct: 223 SSRKGVYLAYAYYRVLFNKIRNLPPQKIMTERIRVANSHKIGIMLQT 269


>gi|329904647|ref|ZP_08273894.1| Phytoene synthase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547882|gb|EGF32637.1| Phytoene synthase [Oxalobacteraceae bacterium IMCC9480]
          Length = 314

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 80/271 (29%), Gaps = 6/271 (2%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
             L       + A  L    +    + LY F   +  + D + +P+     L        
Sbjct: 19  AVLVQKGRTFHWARRLLGAGHAARATRLYGFCRRIDDIADESASPVAARAALAAISVAI- 77

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
                  +    P   ++L+++ + D+  +  L+++     D       D  +   Y +R
Sbjct: 78  ---AHGESSDGEPVVADMLTLMAECDIAPEIVLELLHGVDSDLDPVRFADEAELLRYCYR 134

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
           ++  +  +   +LD     A L      GI   +  +   +       + Y P  ++GA+
Sbjct: 135 VAGTVGLMMCKVLDVTDPQA-LHHAIDLGIGMQLTNICRDVCEDAASDRRYLPATLVGAL 193

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESVL 264
                   +      +   +     L  +Y     + + Y+        +    +  ++ 
Sbjct: 194 APGLLVEPAPALQPALRRGLIRLLALADQYYRSGEQGLAYLPLRARAGMLVAARVYCAIG 253

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              +                 +    + + +
Sbjct: 254 TQLRRADHACWQGRAFVPTRTKAGLTVRAVL 284


>gi|226294172|gb|EEH49592.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 413

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 100/369 (27%), Gaps = 83/369 (22%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
            + +  +     + L  LR  D   Y      P         L  F+  L  + DT   P
Sbjct: 48  ERAKAEYESAHEYCLDLLRKYDRPSYTLSTFIPSQTVNFYLALRAFNISLSMIPDTISTP 107

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQ----------YDLPNQYFLDM 120
               MRLQ+W+D    +  G       P ++ L S +              +   +FL M
Sbjct: 108 TVGLMRLQFWRDTITRTLAGSP--PREPIAILLASALSDLDTRTQANGGARISKSWFLRM 165

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIG 180
           I +      N         E YA    S L++L    L     +A   +  + G A  I 
Sbjct: 166 INSREQYLTNTPYTTISTLESYAENTYSTLLYLTLSALPLTSLTA-DHLASHIGKAAGIS 224

Query: 181 QLICQLPIHY---------------------------HRGQLYFPLDILGAVGLDRESFL 213
            ++  +P+                               G +  PLD++   GL  E   
Sbjct: 225 AVLRGIPLIAFPPPPSHHFKQAGGLDGLRGGGNGAPTRSGAITLPLDVMAETGLKEEDVF 284

Query: 214 S-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILP------------------------ 248
             G  +  +  A+   A     +L  AR+ +  +                          
Sbjct: 285 RHGAEAPGLRDAVFTVATRASDHLITARQMLTNLRGGKDVGHGFEHEGEEGHEYANTNSN 344

Query: 249 ------------------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                               F   +P   T   L   Q   F I            PW  
Sbjct: 345 AKGNGGTSNLDVQLEEVERAFGVLMPAVSTSLWLDRLQAVDFDIFKPELRMFDWKLPWKA 404

Query: 291 LSSSIKKRF 299
             +  ++ F
Sbjct: 405 YWAHRRRTF 413


>gi|121593617|ref|YP_985513.1| squalene/phytoene synthase [Acidovorax sp. JS42]
 gi|120605697|gb|ABM41437.1| Squalene/phytoene synthase [Acidovorax sp. JS42]
          Length = 296

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 8/274 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESST 88
               +  +A LL PP  R  ++ +Y F      + D        R   L+ ++   +S  
Sbjct: 24  THYENFPVASLLCPPRMRPPIAAIYAFARTADDIADEGTACAAERLADLRAYRAELQSVA 83

Query: 89  K-GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY----NDSIFDCKQFEHYA 143
                    +     L +++R + LP     D+++A   D        +  D      Y 
Sbjct: 84  AGHSPQTRWAAVFGPLQAVLRSHQLPVPLLDDLLDAFMQDVTLTEAGATYADRAALLDYC 143

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R ++ +  L   +       A LR       A  +      L +   RG+ Y       
Sbjct: 144 RRSANPVGRLLLHLYGVHGQDA-LRESDAICSALQLINFWQDLSVDLPRGRHYLTDADCA 202

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
           A G+ R    + + S      +   A      + +    +  +   V      V      
Sbjct: 203 AHGVARADLAAQRRSVASDRLVLDCAAWARALMLQGSPLVHRLPGRVGWELRLVVQGGLR 262

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +L   Q      +        L  P  +  ++  
Sbjct: 263 ILDKVQALDGASLLARPRLGTLDWPRMLARAARM 296


>gi|329937103|ref|ZP_08286732.1| phytoene synthase [Streptomyces griseoaurantiacus M045]
 gi|329303710|gb|EGG47595.1| phytoene synthase [Streptomyces griseoaurantiacus M045]
          Length = 310

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 14/272 (5%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------------ARNPITRDMR 76
           +  D +  +A    P  +R  L  +Y F   +  + D                P   D R
Sbjct: 29  KAADENFPVAPFFLPRAWREDLMAVYGFARLVDDIGDGDLAPGGADACLLGVAPERADDR 88

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L           +   A    P    L   VR+  L  + FL +I A+  D         
Sbjct: 89  LALLDAFEADLHRVFDATPRHPLLRRLQPTVRRRALTPEPFLGLIAANRQDQLVTRYETY 148

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +    Y    ++ +  L   +  +       R       A  I + +  +     R ++Y
Sbjct: 149 EDLLAYCELSANPVGRLVLAVTGTTTPERVRR-SDLICTALQIVEHLQDVAEDLGRDRIY 207

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI- 255
            P + +    +      +      +   +   AE   + L +    +  +   +      
Sbjct: 208 LPAEDMKRFHVQEADLATPSAGASVRALVAFEAERARELLNEGAPLVGSVHGRLKLLLAG 267

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            V+   + ++      F ++     P +L   
Sbjct: 268 FVAGGRAAVEAIAAADFDVLPGPPRPGKLRLL 299


>gi|316969578|gb|EFV53646.1| phytoene/squalene synthetase superfamily [Trichinella spiralis]
          Length = 312

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 123/296 (41%), Gaps = 8/296 (2%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           +FL+ N  K    +     + +  +R  D++ +L   + P  Y+ ++  +  F+ EL  +
Sbjct: 25  RFLSWNLNK----YENPYFYCMSLVRRSDFESFLCTSMMPAKYKSAVFSIQAFNVELASI 80

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
                +  +R  R+++WK++     KG I     P +V L     +Y L  ++ LD++EA
Sbjct: 81  PARCSSRQSRHGRIEFWKEVVHGIYKGNI--PEHPVAVTLAESALKYKLSKRWLLDLVEA 138

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                  +     +  E Y  R  S +++L   I + E+  A      + G A  +   I
Sbjct: 139 RRHWLGAEEYRSLRIMEDYFERTFSTVLYLILQICNVEQSEAIGAAG-HLGKALGLVNSI 197

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +P      ++  PLD+L             ++S + +  I+  A+   +++ +AR+  
Sbjct: 198 RSIPHLAAERKILLPLDLLKLHNFTEFG-GQLEDSSKWATVIRDIADHADRHVSEARKLT 256

Query: 244 RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + IL   +PA +   + +  L   + + + + +       L   + +    + + F
Sbjct: 257 KTILKQAYPALLFAVVVDHHLALLRRYNYDVFNAETRRTSLSLVFRLCKQRLFQFF 312


>gi|146303847|ref|YP_001191163.1| squalene/phytoene synthase [Metallosphaera sedula DSM 5348]
 gi|145702097|gb|ABP95239.1| Squalene/phytoene synthase [Metallosphaera sedula DSM 5348]
          Length = 283

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 85/271 (31%), Gaps = 13/271 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
              +      Y + L  PP  R  ++ LY F      + D+          L+ + +   
Sbjct: 7   EIFKRGSTTYYNSTLFFPPKIREDVTKLYAFVRVFDDLVDSVPQRREEFYALRKFYERER 66

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
                      +      + ++R+ D   ++    + A   D +    +   +   Y + 
Sbjct: 67  DGYNT-----GNAVLENFVELMRRKDFDEEWVEAFLNAMETDLHKRVYYTLGETLVYMYG 121

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            +  +      I   +    +    K  G +      I  +    + G+ Y P++ +   
Sbjct: 122 SAEVIGLFMMKI--LDLPKEAEPYAKMLGRSMQYLNFIRDVKEDEYLGRQYLPVEDMERF 179

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITESVL 264
           G++       Q +D     ++   E  L +  +A    R+I    + P      + +   
Sbjct: 180 GVE-----GLQCTDGFKEFMRFQVERYLDFEREAERGYRFIPNRYLIPIKTASEMYKWTG 234

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              +     ++S    P +      ++ +S+
Sbjct: 235 LTIRASPCIVLSRKVKPRKRKIVLSVMKNSV 265


>gi|164428447|ref|XP_965725.2| hypothetical protein NCU00585 [Neurospora crassa OR74A]
 gi|157072150|gb|EAA36489.2| predicted protein [Neurospora crassa OR74A]
          Length = 552

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 94/334 (28%), Gaps = 44/334 (13%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 219 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 276

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI----------------SPFSVELLSIV 107
            D A++               +   K   A                    P + + L ++
Sbjct: 277 VDDAKSRREVLSWTAKLNHFLDLHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALHLL 336

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSI------------FDCKQFEHYAFRISSRLIHLAT 155
             + LP +   D+I+    DS                  D K  E+YA  ++  +  L  
Sbjct: 337 PTHILPPKPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCI 396

Query: 156 MILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
            ++                       GIA     +   + +    G++Y P   L   GL
Sbjct: 397 ALIIYHCLPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGL 456

Query: 208 DRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLK 265
             +  L        I    +   E   +    AR EM+ I  +     I       ++ +
Sbjct: 457 THKMVLENPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAVENYMAIGR 516

Query: 266 HA-QNHGFKIV---SHSHTPNQLVRPWYMLSSSI 295
              +     +        T  +  R   +L +  
Sbjct: 517 VLRERKEGTVFVRMEGRATVPKRRRLSTLLRALY 550


>gi|308810965|ref|XP_003082791.1| phytoene synthase (ISS) [Ostreococcus tauri]
 gi|116061260|emb|CAL56648.1| phytoene synthase (ISS) [Ostreococcus tauri]
          Length = 360

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 88/284 (30%), Gaps = 19/284 (6%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN----PITRDMRLQWW 80
               R+     +LA  L     R     LY +  EL ++ D           R   L   
Sbjct: 3   EETTREYAKSFFLASKLM-GRGREESYALYAWCRELDQLVDGEAASGLTTDERARSLDGV 61

Query: 81  KDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND--SIF 134
            +               ++         +         + F DMI     D   +  +  
Sbjct: 62  AERLRMIFDWDSQAVPTDATYADLALYDATRTVQGFEREPFEDMIRGMRRDLEPNAGAFR 121

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK----YAGIAQFIGQLICQLPIHY 190
              + E YA++++  +  +   IL     +A+    +      GIA  +  ++  +    
Sbjct: 122 TFSEVESYAYQVAGTVALMILPILTIGTNNANDFERRERGVALGIALQMTNIVRDVGEDA 181

Query: 191 H-RGQLYFPLDILGAVGLDRESFLSGQNSDRI--SLAIKIFAELGLKYLFKAREEMRYIL 247
             R ++Y   + L   G      +    +       AI++  +  L Y  +ARE +  + 
Sbjct: 182 RDRERVYIAEEDLKLFGGMTRDDVLSMQTPTFDYKCAIELQIQRALMYYAQAREGVVLLP 241

Query: 248 PDVFPAFIP-VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                       + + +L   + + +  ++     ++L +   +
Sbjct: 242 LSSRLVAACIAGLYKRILLTVRENRYDNLNMRAYASKLQKLALL 285


>gi|89900342|ref|YP_522813.1| squalene/phytoene synthase [Rhodoferax ferrireducens T118]
 gi|89345079|gb|ABD69282.1| Squalene/phytoene synthase [Rhodoferax ferrireducens T118]
          Length = 294

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 79/280 (28%), Gaps = 14/280 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
               +  +A  L P   R  ++ LY+F      + D      T+ ++ LQ ++     + 
Sbjct: 16  THYENFPVASWLCPAHLRAPITALYHFARTADDLADEGDATATQRLQDLQDYRQQLTHAC 75

Query: 89  KGLIAESISP-------FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----IFDCK 137
           +   A + +            L   V+ + LP     D+++A   D              
Sbjct: 76  QTTGAAADTDRKARWASVFGPLQHAVQTHQLPAPLLHDLLDAFVQDVEKTRNGSGYATQA 135

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYF 197
           +   Y  R ++ +  L   +       A          A  +            RG+ YF
Sbjct: 136 ELLDYCRRSANPIGRLLLHLYGVTDTQALAL-SDDICTALQLINFWQDPSRDLPRGRNYF 194

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
             D     G+      + Q +  ++  I  +A      + K  E +  I          V
Sbjct: 195 VTDDCERFGVALADLQTCQQTQSVTNLIAAYAAAARARMLKGSELVHLIAGRAGWELRLV 254

Query: 258 SITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                 +L       F  +           P  +  +   
Sbjct: 255 VQGGLRILDKIDALHFATLRQRPRLRWWDAPILLWRALWM 294


>gi|327292546|ref|XP_003230971.1| hypothetical protein TERG_08447 [Trichophyton rubrum CBS 118892]
 gi|326466777|gb|EGD92230.1| hypothetical protein TERG_08447 [Trichophyton rubrum CBS 118892]
          Length = 403

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 99/352 (28%), Gaps = 73/352 (20%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +  LR  D   Y      P         L+  +  L  + +T        MR
Sbjct: 54  LESAHSYCVELLRKYDRPSYTLSTFIPRHSTKFYIALHALNVSLSMIPETTSTHTIGLMR 113

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDS 128
           LQ+W+D    +  G       P ++ L S +         +  +   + + +I A     
Sbjct: 114 LQYWRDAITRTLAGTP--PKEPIAIFLASAISDLDARTQGRAKISKGWLMRLINAREQHL 171

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            + S       E YA    S L++L    L     +A   +  + G A  I  L+  +P+
Sbjct: 172 AHTSYPTLASLESYAESTYSTLLYLTLSALPLTSLTA-DHLASHIGKAAGITALLRGVPL 230

Query: 189 ------------------------HYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISL 223
                                      +G +  PLD++   G+  E     G ++  +  
Sbjct: 231 VAFPPPPSHHSSQTRMGNEGPIAGDSRQGSIMLPLDVMAQTGVKEEDVFRLGADAPGLRD 290

Query: 224 AIKIFAELGLKYLFKAREEMRYILP----------------------------------- 248
           A+   A     +L  AR+ ++ +                                     
Sbjct: 291 AVFTVATRASDHLITARQMLKNLRAGQDVGHAFEHEGEEGHEYQDDQHEKSTSLSTQLQE 350

Query: 249 --DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
               F   +P   T   L   Q   F I            PW    +  ++ 
Sbjct: 351 VERGFCVLLPAVSTSLWLNKLQKVDFDIFKPELLSTDWRLPWKAYWAYRQRN 402


>gi|239927466|ref|ZP_04684419.1| phytoene synthase [Streptomyces ghanaensis ATCC 14672]
 gi|291435808|ref|ZP_06575198.1| squalene/phytoene synthase [Streptomyces ghanaensis ATCC 14672]
 gi|291338703|gb|EFE65659.1| squalene/phytoene synthase [Streptomyces ghanaensis ATCC 14672]
          Length = 303

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 77/280 (27%), Gaps = 18/280 (6%)

Query: 25  LRNLRDIDYDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL------ 77
              L     + + +A    P  +R  L  +Y F   +  + D    P   D RL      
Sbjct: 14  RATLDKAATENFPVAPFFLPGPWRDDLMAVYGFARLVDDIGDGDLAPGGGDARLLGVRAA 73

Query: 78  ---------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                      ++D               P    L   VR++ L  + FL +I A+  D 
Sbjct: 74  EAEDRLVLLDAFEDDLRRVFDASADGPRHPLLRRLRPTVRRHALTPEPFLALIAANRQDQ 133

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
                        Y    ++ +  L   +  +       R       A  + + +  +  
Sbjct: 134 LVKRYETYDDLLAYCELSANPVGRLVLAVTGTSSPERVRR-SDAICTALQVVEHLQDVAE 192

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              R ++Y P   +    +      +      +   +   A+     L +    +  +  
Sbjct: 193 DLGRDRIYLPAADMKRFHVQEADLAADTAGASVRALVAYQAQRARDLLDEGAPLVGSVHG 252

Query: 249 DVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            +       V+   + +       + ++S      +L   
Sbjct: 253 RLKLLLAGFVAGGRAAVHAIAAAEYDVLSGPPKSGRLRLL 292


>gi|302555529|ref|ZP_07307871.1| squalene synthase HpnC [Streptomyces viridochromogenes DSM 40736]
 gi|302473147|gb|EFL36240.1| squalene synthase HpnC [Streptomyces viridochromogenes DSM 40736]
          Length = 300

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/272 (12%), Positives = 76/272 (27%), Gaps = 14/272 (5%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------------ARNPITRDMR 76
           +    +  +A    P  +R  L  +Y F   +  + D               +P   + R
Sbjct: 19  KAAGENFPVAPFFLPRAWREDLMAVYGFARLVDDIGDGDLAPGGADARLLGVSPEEAEDR 78

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L           +   +    P    L   VR+  L    FL +I A+  D         
Sbjct: 79  LALLDAFEADLRRVFDSTPHHPLLRRLQPTVRRRSLTPGPFLGLIAANRQDQVVRRYETY 138

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y    ++ +  L   +  +       R       A  I + +  +       ++Y
Sbjct: 139 DDLLAYCELSANTVGRLVLAVTGTSSPERIRR-SDMICTALQIVEHLQDVAEDLGSDRVY 197

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI- 255
            P   +    ++     +      +   I   A+     L +    +  +   +      
Sbjct: 198 LPAADMKRFHVEEADLATKTAGASVRALIAYEAQRARDLLNEGAPLVGSVHGRLKLLLAG 257

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            V+   + ++      + ++S    P ++   
Sbjct: 258 FVAGGRAAVRAIAAADYDVLSGPPKPGKVQLL 289


>gi|311067567|ref|YP_003972490.1| putative squalene/phytoene synthase [Bacillus atrophaeus 1942]
 gi|310868084|gb|ADP31559.1| putative squalene/phytoene synthase [Bacillus atrophaeus 1942]
          Length = 280

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 76/268 (28%), Gaps = 11/268 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             R         +      Y A    P   R +   +Y F    + + D           
Sbjct: 4   IKRAYQQCEEITKTHAPTCYQAFTFLPLKRRQAACAVYAFCHTAITIDD--------KDE 55

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L   +   E    G   E        L    RQ+ L  + F + I     ++        
Sbjct: 56  LSALERDAEQCLAG-TYEENHFLWAALADAFRQFALEAEPFREFIAGIHENNEKTRFETL 114

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQL 195
            +   +A++  S    +   IL         +     G+A  + +++      Y R  ++
Sbjct: 115 DELLMFAYQTGSTAGLMLLPILTKRNKEKLRQAAVSLGLAIQLTRMLRDAGKDYRRKKRI 174

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAF 254
            FP   +   G   + F +   +       +  A     Y  +  + M            
Sbjct: 175 CFPQQAMRQFGYTEDDFCNETVNKAFVSTWEYVAFEAEAYAEECFDAMSLFPRYSQSSVK 234

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPN 282
               + ++VL   +   +++ + + T  
Sbjct: 235 AAAYLYKAVLDKIRAEHYEVFTKNMTLT 262


>gi|326472600|gb|EGD96609.1| hypothetical protein TESG_04045 [Trichophyton tonsurans CBS 112818]
 gi|326483588|gb|EGE07598.1| hypothetical protein TEQG_06512 [Trichophyton equinum CBS 127.97]
          Length = 403

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 98/352 (27%), Gaps = 73/352 (20%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +  LR  D   Y      P         L+  +  L  + +T        MR
Sbjct: 54  LESAHNYCVELLRKYDRPSYTLSTFIPRHSTKFYIALHALNVSLSMIPETTSAHTIGLMR 113

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDS 128
           LQ+W+D    +  G       P ++ L S +         +  +   + + +I A     
Sbjct: 114 LQYWRDAITRTLAGTP--PKEPIAILLASALSDLDARTQGRAKISKGWLMRLINAREQHL 171

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            +         E YA    S L++L    L     +A   +  + G A  I  L+  +P+
Sbjct: 172 AHTPYPTLASLESYAESTYSTLLYLTLSALPLTSLTA-DHLASHIGKAAGITALLRGVPL 230

Query: 189 ------------------------HYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISL 223
                                      +G +  PLD++   G+  E     G ++  +  
Sbjct: 231 VAFPPPPSHHSSQTRMGNEGPIAGDSRQGSIMLPLDVMAQTGVKEEDVFRLGADAPGLRD 290

Query: 224 AIKIFAELGLKYLFKAREEMRYILP----------------------------------- 248
           A+   A     +L  AR+ ++ +                                     
Sbjct: 291 AVFTVATRASDHLITARQMLKNLRAGQDVGHAFEHEGEEGHEYQDDQHEKSTSLSTQLRE 350

Query: 249 --DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
               F   +P   T   L   Q   F I            PW    +  ++ 
Sbjct: 351 VERGFCVLLPAVSTSLWLNKLQKVDFDIFKPELLSTDWRLPWKAYWAYRQRN 402


>gi|90420013|ref|ZP_01227922.1| phytoene synthase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336054|gb|EAS49802.1| phytoene synthase [Aurantimonas manganoxydans SI85-9A1]
          Length = 329

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 74/273 (27%), Gaps = 13/273 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT---------ARNPITRDM 75
              +         A  L     R S   LY +        D               +   
Sbjct: 24  EDTIAKGSRSFAAAARLFDAETRRSAMMLYAWCRHCDDTIDDQVLGFARRPLGTLCSGAE 83

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RL   +    ++ +G       P    +  +V ++ LP +  L  +  +  D        
Sbjct: 84  RLALLERETLAALRGEPT--SHPSFRAVADVVARHGLPQELLLQHLHGYRMDVEERHYAT 141

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 Y + ++  +      ++   +   +L      GIA  +  +   +      G++
Sbjct: 142 VADTLTYCYHVAGVVGV-MMSMVMGAKDETTLDRASDLGIAFQLTNIARDIVEDARAGRV 200

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P + L    L        +    +SL      +L   Y   A   +R + P    A  
Sbjct: 201 YLPAEWLADADLKPGDLADPRQRPVVSLVANRLIDLAEPYYASAFHGLRELPPRSAWAVA 260

Query: 256 PV-SITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
               +   +    +  G        +  +  + 
Sbjct: 261 TAHGVYREIGMQVKGLGANAWDARVSTGRRQKL 293


>gi|316964123|gb|EFV49382.1| phytoene/squalene synthetase superfamily [Trichinella spiralis]
          Length = 309

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 123/296 (41%), Gaps = 8/296 (2%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           +FL+ N  K    +     + +  +R  D++ +L   + P  Y+ ++  +  F+ EL  +
Sbjct: 22  RFLSWNLNK----YENPYFYCMSLVRRSDFESFLCTSMMPAKYKSAVFSIQAFNVELASI 77

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
                +  +R  R+++WK++     KG I     P +V L     +Y L  ++ LD++EA
Sbjct: 78  PARCSSRQSRHGRIEFWKEVVHGIYKGNI--PEHPVAVTLAESALKYKLSKRWLLDLVEA 135

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                  +     +  E Y  R  S +++L   I + E+  A      + G A  +   I
Sbjct: 136 RRHWLGAEEYRSLRIMEDYFERTFSTVLYLILQICNVEQSEAIRAAG-HLGKALGLVNSI 194

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +P      ++  PLD+L             ++S + +  I+  A+   +++ +AR+  
Sbjct: 195 RSIPHLAAERKILLPLDLLKLHNFTEFG-GQLEDSSKWATVIRDIADHADRHVSEARKLT 253

Query: 244 RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + IL   +PA +   + +  L   + + + + +       L   + +    + + F
Sbjct: 254 KTILKQAYPALLFAVVVDHHLALLRRYNYDVFNAETRRTSLSLVFRLCKQRLFQFF 309


>gi|39940418|ref|XP_359746.1| hypothetical protein MGG_05031 [Magnaporthe oryzae 70-15]
 gi|145010724|gb|EDJ95380.1| hypothetical protein MGG_05031 [Magnaporthe oryzae 70-15]
          Length = 366

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/340 (16%), Positives = 100/340 (29%), Gaps = 62/340 (18%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E    +   + +  LR  DY+ YL     PP  + +       + EL R+ +T  NP+ 
Sbjct: 30  TETDVEKARAYCVNQLRHGDYEAYLIRRFLPPSAQDAYDAFRTLNLELARLPETVSNPLI 89

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLP------NQYFLDMIEAHFF 126
             MR+Q+W+D   S+  G       P S+ L  ++              + L ++     
Sbjct: 90  GQMRMQFWRDSINSTFAGNP--PREPISILLHKVISDLGRRGSPSSIKFWLLRLLSTREQ 147

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
              N         E Y     + L++                +  + G A  I  ++  +
Sbjct: 148 YMDNRPFASLAALEDYGENTYATLMYATLAATGLRSLH-VDHLASHIGKACGIAAILRGV 206

Query: 187 PIHYHRGQ----------------LYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFA 229
           P+                      L  PLD++   G+  E     G  +  +  AI   A
Sbjct: 207 PVLAAPRPPVQSPLGENSSNAGPALLLPLDVMAKAGVREEDVFRRGPEAPGLQDAIFEVA 266

Query: 230 ELGLKYLFKAREEMRYILPDVFPA---------------------------------FIP 256
                +L  ARE ++ +     P                                   + 
Sbjct: 267 TRANDHLITAREMLKNLKAGQNPGHDFEHEGESEHVYDAKDASAERTKLEVQRGFGTLLE 326

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                  L+  +N  F         +    PW +  ++ K
Sbjct: 327 AIPAADFLQRLENANFDPFRVK---SSWKLPWSLWRAAQK 363


>gi|312216636|emb|CBX96586.1| hypothetical protein [Leptosphaeria maculans]
          Length = 385

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 105/355 (29%), Gaps = 66/355 (18%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
               +  +    R   +    +R  D   ++     PP  R +   +  F+ E+ RV DT
Sbjct: 33  NGAAQVSQAEVERARNYCANLIRTYDAPSHVLQTFIPPSSRDAYLAIRAFNIEVARVADT 92

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFL 118
              P    MR+Q+WKD    +  G       P ++ L             +  L   +F 
Sbjct: 93  TSTPTIGLMRMQFWKDTVAKALAGTP--PKEPVAIMLARAGDDLHERSEGKARLNKSWFY 150

Query: 119 DMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQF 178
            MI        N         E YA    S +++L    L     +    +  + G A  
Sbjct: 151 RMISTREQHLGNPPYPTLSALESYAENTYSTMLYLTLSALPQASLTT-DHIASHIGKAMG 209

Query: 179 IGQLICQLPIHY-------------------HRGQLYFPLDILGAVGLDRESFLS-GQNS 218
           I  ++  +P+                      +G +  PLD++    +  E     G  +
Sbjct: 210 IAAVLRGVPLVAFPPQQPLGTSNSMTGQSGPTQGAVLLPLDVMAEANVREEDVFRQGAAA 269

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPD----------------------------- 249
             +  AI   A     +L  ARE +  +  +                             
Sbjct: 270 PGLRDAIFTVATRANDHLITAREMLSKLRSEGTLGHEFEHQHEEEHQYSMQQLNTGKDTQ 329

Query: 250 ------VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                  F  F+P   T+S L   Q   F I   S        P     +  +++
Sbjct: 330 LAEVEQAFGVFMPSISTQSWLDRLQKVDFDIFDASLRTVDWKLPVKAYWAYSRRQ 384


>gi|317453463|emb|CBY78076.1| mutant phytoene synthase/carotene cyclase [Neurospora crassa]
          Length = 602

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 94/334 (28%), Gaps = 44/334 (13%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 269 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI----------------SPFSVELLSIV 107
            D A++               +   K   A                    P + + L ++
Sbjct: 327 VDDAKSRREVLSWTAKLNHFLDLHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALHLL 386

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSI------------FDCKQFEHYAFRISSRLIHLAT 155
             + LP +   D+I+    DS                  D K  E+YA  ++  +  L  
Sbjct: 387 PTHILPPKPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCI 446

Query: 156 MILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
            ++                       GIA     +   + +    G++Y P   L   GL
Sbjct: 447 ALIIYHCLPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGL 506

Query: 208 DRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLK 265
             +  L        I    +   E   +    AR EM+ I  +     I       ++ +
Sbjct: 507 THKMVLENPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAEENYMAIGR 566

Query: 266 HA-QNHGFKIV---SHSHTPNQLVRPWYMLSSSI 295
              +     +        T  +  R   +L +  
Sbjct: 567 VLRERKEGTVFVRMEGRATVPKRRRLSTLLRALY 600


>gi|320037538|gb|EFW19475.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 404

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 101/361 (27%), Gaps = 76/361 (21%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
             +  F     + +  L+  D   Y      P         L   +  L  + D+  NP 
Sbjct: 47  NSKAEFESAQKYCIELLQKYDRPSYTLSTFIPRHTLNFYIALRALNVSLSLIPDSTSNPT 106

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEA 123
              MRLQ+W+D    +  G       P ++ L   +         +  +   +   +I A
Sbjct: 107 IGLMRLQFWRDTITKTLAGTP--PKEPIAILLAHSLSSLDARTKGKARISKGWLTRLINA 164

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                 N    +    + YA    S L++L   +L          +  + G A  I  ++
Sbjct: 165 REQPLTNTPYTNIAALDQYAENTYSTLLYLTLSVLPLTSL-TVDHLASHIGKAAGITSIL 223

Query: 184 CQLPIHY---------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRI 221
             LP+                        +G +  PLD++    L  E     G ++  +
Sbjct: 224 RGLPLVAFPPPPNHHSNQDPLGGPGGSTRQGHITLPLDVMAQTRLKEEDVFRQGADAPGL 283

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILP--------------------------------- 248
             A+   A     +L  AR+ ++ +                                   
Sbjct: 284 RDAVFAVATRASDHLITARQMLQNLRAGKDVGHDFEHEGEEGHEYYGHEPAADGADSKMS 343

Query: 249 ----------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                       F   +P   T+  L   Q   F I            PW    +  +++
Sbjct: 344 NLAVQLQDVERGFGVLMPAVSTQLWLDKLQKVDFDIFKPELLSTDWKLPWKAYLAFQRRK 403

Query: 299 F 299
           F
Sbjct: 404 F 404


>gi|254468895|ref|ZP_05082301.1| phytoene synthase, putative [beta proteobacterium KB13]
 gi|207087705|gb|EDZ64988.1| phytoene synthase, putative [beta proteobacterium KB13]
          Length = 294

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 93/284 (32%), Gaps = 29/284 (10%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN----PITRDMRLQWW 80
            + ++      Y A       Y   +  +Y    +L  + D             ++    
Sbjct: 5   RQIIKQNGKSFYWASKFLGKDYIDPIYSIYEMCRKLDDIVDEQSEEAAIKEIGLIKKDLT 64

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           K+  +   +             L  +        +YF + I     D          +  
Sbjct: 65  KESLQKKFE------------SLKRLNDDQFPQIKYFEEFILGQERDINFRQPKSINELL 112

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y +R++  +  +    ++ +            GIA  +  ++  +     RG++Y P +
Sbjct: 113 RYCYRVAGVVGLMVCDAVNIKD-ENLKFFAIDLGIAMQLVNIVRDIQEDALRGRVYIPEN 171

Query: 201 ILGAVG----LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-I 255
           ++GAV     L +   +S    +++        ++  KY   A   ++++  +V  AF +
Sbjct: 172 LIGAVSASDVLTKPDLISKVEQEKLR-----ILDIADKYFNSANYAIKFLPKEVSMAFGL 226

Query: 256 PVSITESVLKHAQNHGFKIV-SHSHTPNQLVRPWYMLSSSIKKR 298
             ++ + + K       +   +     N   + ++ L   +K +
Sbjct: 227 ASNLYQGIGKKIIKKE-QPFTNGRVYLNGAEKLFHTLKFLLKSK 269


>gi|168036068|ref|XP_001770530.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678238|gb|EDQ64699.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 271

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/288 (19%), Positives = 98/288 (34%), Gaps = 32/288 (11%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +R +R  DY+ +L  L  PP  R +   L  F+ E  +  D  +      MR
Sbjct: 11  LRNAFSYCVRQVRTNDYENFLCILHLPPGPRAAAFALRAFNIETAQAGD-MKETNLAMMR 69

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L WW+D  +   K    E   P    L +++ +  L   +F  ++EA   D  + S  + 
Sbjct: 70  LVWWRDAVDGIYKKKTLE--HPVIQALGAVISENRLSKHWFTRLLEARMTDLDSMSPLNV 127

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            + E YA   +S L++L          SA      + G    +G L+   P H  R + Y
Sbjct: 128 AEVERYAEDTASSLLYLTLEASGIRNTSA-DHAASHIGKTAGMGLLLRASPYHGARRRSY 186

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PL+                            A +   +L KAR     +     P  +P
Sbjct: 187 IPLETAAK-----------------------VASVANSHLEKARSLAPLVPAPALPVLLP 223

Query: 257 VSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
                 +L+  +   F +            + L     +   + K  +
Sbjct: 224 AVPAGVLLQTLERINFNVFDPKLVRGVCGISPLWMHLKLKWHAYKGTY 271


>gi|119174702|ref|XP_001239693.1| hypothetical protein CIMG_09314 [Coccidioides immitis RS]
          Length = 404

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 101/361 (27%), Gaps = 76/361 (21%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
             +  F     + +  L+  D   Y      P         L   +  L  + D+  NP 
Sbjct: 47  NSKAEFESAQKYCIELLQKYDRPSYTLSTFIPRHTLNFYIALRALNVSLSLIPDSTSNPT 106

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEA 123
              MRLQ+W+D    +  G       P ++ L   +         +  +   +   +I A
Sbjct: 107 IGLMRLQFWRDTITKTLAGTP--PKEPIAILLAHSLSSLDARTKGKARISKGWLTRLINA 164

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                 N    +    + YA    S L++L   +L          +  + G A  I  ++
Sbjct: 165 REQPLTNTPYTNIAALDQYAENTYSTLLYLTLSVLPLTSL-TVDHLASHIGKAAGITSIL 223

Query: 184 CQLPIHY---------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRI 221
             LP+                        +G +  PLD++    L  E     G ++  +
Sbjct: 224 RGLPLVAFPPPPNHHSNQDPLGGPGGSTRQGHITLPLDVMAQTRLKEEDVFRQGADAPGL 283

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILP--------------------------------- 248
             A+   A     +L  AR+ ++ +                                   
Sbjct: 284 RDAVFAVATRASDHLITARQMLQNLRAGKDVGHDFEHEGEEGHEYYGHEPAADGADSKMS 343

Query: 249 ----------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                       F   +P   T+  L   Q   F I            PW    +  +++
Sbjct: 344 NLAVQLQDVERGFGVLMPAVSTQLWLDKLQKVDFDIFKPELLSTDWKLPWKAYLAFQRRK 403

Query: 299 F 299
           F
Sbjct: 404 F 404


>gi|289208684|ref|YP_003460750.1| squalene synthase HpnC [Thioalkalivibrio sp. K90mix]
 gi|288944315|gb|ADC72014.1| squalene synthase HpnC [Thioalkalivibrio sp. K90mix]
          Length = 292

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 86/284 (30%), Gaps = 7/284 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                            +  +A  L P   R  ++ +Y F  +   + D  + P+  + R
Sbjct: 7   IRAAYRHCRVRATAHYENFPVASWLLPARLRGPVAAIYCFARDADDLADEDQRPVD-ERR 65

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
                           A    P  + L    +++ LP   F+D+++A   D         
Sbjct: 66  ADLVAMQERVQILEDPAAESEPEWIALADARQRFGLPAAPFVDLVDAFIQDLEQTRYATF 125

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQL 195
            +   Y  R ++ +  L   +  +      +        A  +      L        ++
Sbjct: 126 GEVVEYCRRSANPVGRLMLYLDGNPT-EEMIGYSDAVCSALQLINFYQDLHQDLTENDRI 184

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P D +   G+  E+  +GQ + ++   ++       + L         +   +     
Sbjct: 185 YLPQDEMAQYGVSEETIAAGQTTFQLRNLMQFQYARADRLLRAGAPLGGMLRGRMGLEIR 244

Query: 256 PVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +      VL   +     + +      +    W +L+ S++ R
Sbjct: 245 AIINGGARVLWRLRQQD-DVFA-RPRL-RARDAWVILAHSLRPR 285


>gi|317031856|ref|XP_001393561.2| hypothetical protein ANI_1_1208084 [Aspergillus niger CBS 513.88]
          Length = 395

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 101/348 (29%), Gaps = 64/348 (18%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E        +    L   D   Y      P   +     L   +  L  + DT  +   
Sbjct: 50  SEAEVQAAQKYCSNLLLQYDRPSYTLSTFIPRNAQSFYIALRALNVSLSLIPDTTSSHTI 109

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAH 124
             MRLQ+W+D    +  G       P ++ L S +         +  +   +   MI A 
Sbjct: 110 GLMRLQFWRDAVAKTLSGSP--PKEPIAILLASAISDLAERTQGRARISKGWLNRMINAR 167

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
                ND   D    E YA    S L++L    L     +A   V  + G A  I  ++ 
Sbjct: 168 EQTLTNDPYPDIAALESYAESTYSTLLYLTLSALPMTSVTA-DHVASHIGKAAGITAVLR 226

Query: 185 QLPIHY--------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISL 223
            LP+                       +G +  PLD++   G+  E     G  +  +  
Sbjct: 227 GLPLVAFPGASTQRPDQAGTTMAGGAKQGAVMLPLDVMAQAGVKEEEVFRLGSEAPGLRD 286

Query: 224 AIKIFAELGLKYLFKAREEMRYILP--------------------------------DVF 251
           A+   A     +L   ++ +  I                                    F
Sbjct: 287 AVFAVATRASDHLITVQQMLSNIRAGQDAGHDFEHGHEEDHQYDLGSQNETPLQEVNRAF 346

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             F+P   T   L   ++H F I       +    PW    +  +K F
Sbjct: 347 GVFMPAVGTRLWLDRLESHDFDIFQPELLRSDWKLPWKAYMAFTRKTF 394


>gi|317453465|emb|CBY78077.1| mutant phytoene synthase/carotene cyclase [Neurospora crassa]
          Length = 602

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 94/334 (28%), Gaps = 44/334 (13%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 269 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI----------------SPFSVELLSIV 107
            D A++               +   K   A                    P + + L ++
Sbjct: 327 VDDAKSRREVLSWTAKLNHFLDLHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALHLL 386

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSI------------FDCKQFEHYAFRISSRLIHLAT 155
             + LP +   D+I+    DS                  D K  E+YA  ++  +  L  
Sbjct: 387 PTHILPPKPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCI 446

Query: 156 MILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
            ++                       GIA     +   + +    G++Y P   L   GL
Sbjct: 447 ALIIYHCLPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGL 506

Query: 208 DRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLK 265
             +  L        I    +   E   +    AR EM+ I  +     I       ++ +
Sbjct: 507 THKMVLENPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAEENYMAIGR 566

Query: 266 HA-QNHGFKIV---SHSHTPNQLVRPWYMLSSSI 295
              +     +        T  +  R   +L +  
Sbjct: 567 VLRERKEGTVFVRMEGRATVPKRRRLSTLLRALY 600


>gi|29828196|ref|NP_822830.1| squalene/phytoene synthase [Streptomyces avermitilis MA-4680]
 gi|29605298|dbj|BAC69365.1| squalene/phytoene synthase [Streptomyces avermitilis MA-4680]
          Length = 300

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 79/272 (29%), Gaps = 14/272 (5%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------------ARNPITRDMR 76
           +  D +  +A    P  +R  L  +Y F   +  + D               +P   + R
Sbjct: 19  KAADENFPVAPFFLPRAWRTDLMAVYGFARLVDDIGDGDLAPGGADARLLGVSPREAEDR 78

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L           +   +    P    L   VR+  L  + FL +I A+  D         
Sbjct: 79  LALLDAFEADLHRVFDSTPRHPLLRRLQPTVRRTGLSPEPFLGLIAANRQDQLVTRYETY 138

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y    ++ + HL   +  +       R       A  I + +  +     R ++Y
Sbjct: 139 DDLVAYCELSANPVGHLVLGVTGTSTPERVRR-SDAICTALQIVEHLQDVSEDLGRDRVY 197

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI- 255
            P + +    +      +      +   +    E  L  L +    +  +   +      
Sbjct: 198 LPAEDMKRFHVQEADLATATAGASVRALVAYETERALNLLNEGTPLVGSVHGRLRLLLAG 257

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            V+   + ++      + ++     P +L   
Sbjct: 258 FVAGGRAAIRAIAAAEYDVLPGPPKPGKLQLL 289


>gi|329897189|ref|ZP_08271929.1| Phytoene synthase [gamma proteobacterium IMCC3088]
 gi|328921344|gb|EGG28738.1| Phytoene synthase [gamma proteobacterium IMCC3088]
          Length = 314

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 83/263 (31%), Gaps = 13/263 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIF 84
             L       Y A          + + LY     L  + D+A ++ +T+   L+  K   
Sbjct: 19  ETLASHGKTFYWASFFLTRRQAKAAAELYACCRALDDLADSATQSKLTKKQTLKALKLAL 78

Query: 85  ESSTKGLIAESIS-PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
           E        +    P    L  +  Q+ +P      +++    D+ + +I    + + Y 
Sbjct: 79  E-----HADQPTHYPLGEALRRLTSQHQIPATALASLLDGLITDTESVAITSKSELDRYC 133

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           FR++  +  +   IL      A    I   GIA  +  +   +      G+ Y P+D+  
Sbjct: 134 FRVAGTVGLMMCPILGVSDERALPFAID-LGIAMQLTNICRDVLEDAELGRRYLPVDLTP 192

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITES 262
                   F S     R+  A+    +    +       + Y+        FI   +  +
Sbjct: 193 ----VELRFASETIKIRVQHALADQLQRAEVFYQSGLCGLAYLPRRSRVAIFIAAHLYRA 248

Query: 263 VLKHAQNHGFKIVSHSHTPNQLV 285
           + +  Q+              + 
Sbjct: 249 IGRKLQDRRLAWWEGRTVIAPME 271


>gi|114705592|ref|ZP_01438495.1| phytoene synthase [Fulvimarina pelagi HTCC2506]
 gi|114538438|gb|EAU41559.1| phytoene synthase [Fulvimarina pelagi HTCC2506]
          Length = 352

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 82/283 (28%), Gaps = 21/283 (7%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT---------ARNPITRDMRLQ 78
           +         A  L  P  R+S   LY +      V D           R+      RL 
Sbjct: 33  IAQGSKSFAAAARLFDPEMRVSALMLYAWCRHCDDVVDDQILGFRQPGRRDRAGDRARLD 92

Query: 79  WWK-DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             +     +       E+       +  +  +++LP       +E    D         +
Sbjct: 93  ELEAKTLAAVRGRSTGEAP---FDAIGDVALRHELPESLLTAHLEGFRMDVDGRVYEVIE 149

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLR-------VIKYAGIAQFIGQLICQLPIHY 190
               Y +R++  +  +   ++     + S              G+A  +  +   +    
Sbjct: 150 DTLDYCYRVAGVVGVMMARVMGIRVENGSKFDLTLTLDRACDLGMAFQLTNIARDIVDDG 209

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
             G++Y P   L A G+   +    +N +  ++      +L   Y   A + +  + P  
Sbjct: 210 EAGRVYVPKTWLDAAGVPGSAIHHPRNREAAAVFALRLLDLAEPYYASASKGLAALPPRA 269

Query: 251 FPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             A    + +   +    +  G +      + +   +  +   
Sbjct: 270 AWAVATALGVYREIGTVIRRRGSQAWDDRSSTSAATKFLHAFK 312


>gi|21225052|ref|NP_630831.1| phytoene synthase [Streptomyces coelicolor A3(2)]
 gi|4539163|emb|CAB39692.1| putative phytoene synthase [Streptomyces coelicolor A3(2)]
          Length = 303

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 76/277 (27%), Gaps = 17/277 (6%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
             +  D +  +A    P  +R  L  +Y F   +  + D    P   D RL         
Sbjct: 17  LAKAADENFPVAPFFLPRAWRTDLMAVYGFARLVDDIGDGDLAPGGADARLLGVPEDRAD 76

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                   ++        G       P    L+  VR+  L  + FL +I A+  D    
Sbjct: 77  DRLLMLDAFEADLRRVFDGSDGAPRHPLLRRLVPTVRRRALTPEPFLGLIAANRQDQLVA 136

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                     Y    ++ +  L   +  +       R       A  I + +  +     
Sbjct: 137 RYETYDDLLAYCELSANPVGRLVLAVTGTSTPERIRR-SDEICTALQIVEHLQDVAEDLG 195

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           R ++Y P + +    +      +   +  +   I   A      L +    +  +   + 
Sbjct: 196 RDRIYLPAEDMKRFHVQEADLAAPSANASVRALIAYEAARARDLLNEGAPLVGSVHGRLR 255

Query: 252 PAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
                 V+   + L         ++       ++   
Sbjct: 256 LLLAGFVAGGRAALNAIAAADHDVLPGPPKSGKVHLL 292


>gi|294632398|ref|ZP_06710958.1| squalene synthase HpnC [Streptomyces sp. e14]
 gi|292835731|gb|EFF94080.1| squalene synthase HpnC [Streptomyces sp. e14]
          Length = 298

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 74/272 (27%), Gaps = 14/272 (5%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP------------ITRDMR 76
           +    +  +A    P  +R  L  +Y F   +  + D    P                 R
Sbjct: 17  KAAGENFPVAPFFLPRAWRTDLMAVYGFARLVDDIGDGDLAPGGADARLLGVSATDAQDR 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L           +        P    L   VR+  LP + FL +I A+  D         
Sbjct: 77  LVLLDAFEADLRRVFDGTPRHPLLRRLQPTVRRCALPVEPFLALIAANRQDQLVARYETY 136

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y    ++ +  L   +  +       R       A  I + +  +     R ++Y
Sbjct: 137 DDLLAYCELSANPVGRLVLGVTGTSTPERVRR-SDAICTALQIVEHLQDVKEDLGRDRVY 195

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI- 255
            P + +    +      +      +   +   AE     L +    +  +   +      
Sbjct: 196 LPAEDMKRFHVQEADLAAPTAGASVRALVAFEAERARDLLNEGAPLVGSVHGRLKLLLAG 255

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            V+   + +       + ++     P ++   
Sbjct: 256 FVAGGRAAVDAIAAAAYDVLPGPPKPGKVQLL 287


>gi|114768987|ref|ZP_01446613.1| hypothetical protein OM2255_04635 [alpha proteobacterium HTCC2255]
 gi|114549904|gb|EAU52785.1| hypothetical protein OM2255_04635 [alpha proteobacterium HTCC2255]
          Length = 258

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 110/284 (38%), Gaps = 27/284 (9%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
            F  D       +R  D+DR+LA + +P   R +L  ++ F+ E++R     + P+  +M
Sbjct: 2   NFEEDIGNCADLVRRGDHDRFLAIMSAPVKERGALFVIFAFNLEVVRAPWVTKEPMISEM 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RLQWW D  +   +G          + L  +++Q +LP Q F+++I A  +D Y      
Sbjct: 62  RLQWWIDSIDEIFQGNTI-RKHEVIIPLAKLIKQKNLPKQLFIELINARRWDIYKKPHDH 120

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
              F+ Y    S  L+ LA + +        +   K  G    I +L   +PI     + 
Sbjct: 121 AYAFDDYIMATSGNLMALACLAVGMPFSD--INSAKEYGYGDGIARLFVAIPILEENNRY 178

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
                   AV L   + L+  NS   S                             PA  
Sbjct: 179 PLVNGTENAVSLLANTALNKMNSVVFS------------------------DKSAIPALR 214

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              +++ +L   Q +   ++S    P++ ++   + S  IK+ F
Sbjct: 215 LAWLSKGILIKVQKNPKSVISGILYPSEFIKKLLLFSKVIKRTF 258


>gi|307729631|ref|YP_003906855.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1003]
 gi|307584166|gb|ADN57564.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1003]
          Length = 277

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 31/275 (11%), Positives = 79/275 (28%), Gaps = 6/275 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    E         +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSTYYALRQAPAASQPRLTALFALRREFEETVKEVSDPAIGRTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +   +           P S  L + +            ++     D       D      
Sbjct: 65  NELGALA---SGSPTHPVSKALAASLPDAKSEYPALQTLLRGFEMDLDQARYLDYPNLRR 121

Query: 142 YAFRISSRLIHLATMI--LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           Y   +      L       ++   + +       G A  + QL+ +       G++Y P+
Sbjct: 122 YVQAVGGTFAALVARAASKEAATATEAAAWSAPLGEALLLAQLVVETGNDARHGRIYIPI 181

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVS 258
           D +    +     ++ + +D  +  ++   +     L  A   +               +
Sbjct: 182 DEMQRFNVTAADLINRKYTDAFTELMRFETKRARDALHAALAAVPGRERRAQRTLLAQGA 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +  ++L   +  G+ ++        + + W    +
Sbjct: 242 LAAALLDEIERDGYHVLHQRIALTPIRKLWIAWRA 276


>gi|299533081|ref|ZP_07046467.1| Squalene/phytoene synthase [Comamonas testosteroni S44]
 gi|298718966|gb|EFI59937.1| Squalene/phytoene synthase [Comamonas testosteroni S44]
          Length = 297

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 76/281 (27%), Gaps = 14/281 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFES-- 86
               +  +A  L PP  R  ++ +Y+F      + D        R  +LQ +    +   
Sbjct: 15  THYENFPVASWLCPPRLRAPIAAIYHFARTADDLADEGQHGTEQRLAQLQQYAADLQQLG 74

Query: 87  ---STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY----NDSIFDCKQF 139
                  L+  +       L   V+ + LP     D++ A   D       D   D  Q 
Sbjct: 75  SASEAAMLMRTAWPHIFGPLAVQVQAHGLPKPLLSDLLSAFEQDVRMTAAQDRYSDMAQL 134

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y  R ++ +  L   +       A L        A  +      L     R + Y P 
Sbjct: 135 LDYCRRSANPVGRLLLHLYGVANAKA-LIQSDAICTALQLINFWQDLSQDLPRQRHYLPD 193

Query: 200 DILGAVGLDRESFL--SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
             L   G+ R +    +   +  +   +          +      +  +          V
Sbjct: 194 ADLARHGIARSAIKPDAAALTPELQSLLDELNRQARSLMHHGAPLVHQLPGRTGWELRLV 253

Query: 258 SITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                 +L        + +       +L     +  +   +
Sbjct: 254 VQGGLRILDRLDAMQGRNLYQRIKLGKLDMVAMLWKAVRMR 294


>gi|193648048|ref|XP_001943170.1| PREDICTED: bifunctional enzyme CarRP-like isoform 1 [Acyrthosiphon
           pisum]
 gi|328701647|ref|XP_003241669.1| PREDICTED: bifunctional enzyme CarRP-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 608

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 93/310 (30%), Gaps = 41/310 (13%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D    L  L+       +A L+ P   R+ L  LY F      + D+      +  +L+
Sbjct: 279 NDIRQCLNVLKRASKSFNVASLVFPAGVRLHLIILYAFCRVTDDMIDSEPKVGVKKQKLK 338

Query: 79  WWKDIFESSTKGLIAE--------SISPFSVELLSIVR---------------QYDLPNQ 115
             +   +       A+           P        +                 + LP +
Sbjct: 339 LIETFIDELFADRSADYDVKTSMTPRKPEVKWEQYRLDLTDEELSCFRAISRISFYLPRK 398

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY--- 172
            F ++++ + +D    ++ +      Y+  ++  +  L   ++  +  +      ++   
Sbjct: 399 PFYELLDGYRWDVDGKTVQNETDLLLYSSYVAGSVGTLCVYVMVYKSGTQIDDDKRHDFV 458

Query: 173 ------AGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQN-----SDR 220
                  G    I  +   +       G+ Y P + +        +  S ++     S++
Sbjct: 459 IGKAQQMGQVLQIVNISRDIVTDSETLGRCYVPAEYMDNAAAVVNTLCSDRDPWTLGSEK 518

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSH 279
           +         L  +Y  ++ E +RY+  +V  P  +   I   V    +           
Sbjct: 519 LKSYATRMIRLANRYQLESLEGIRYLPYEVRGPVLVATDIYRGVACAVEASP--TYPRRA 576

Query: 280 TPNQLVRPWY 289
           +  +  +   
Sbjct: 577 SLGKWDKILV 586


>gi|326316319|ref|YP_004233991.1| squalene synthase HpnC [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373155|gb|ADX45424.1| squalene synthase HpnC [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 296

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 72/271 (26%), Gaps = 8/271 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMRLQWWKDIFESST 88
               +  +A  L PP  R  ++ +Y F      + D        R   L  +        
Sbjct: 24  THYENFPVASWLCPPSLREPIAAIYAFARTADDLADEGDATAAERLEALDGYAKELHRVA 83

Query: 89  KGLIAESIS-PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND----SIFDCKQFEHYA 143
            G   ++        L   +R + LP     D++ A   D        +  D      Y 
Sbjct: 84  AGEPPQARWAEVFGPLQGAIRTHSLPVALLEDLLSAFTQDVLRTSEGLTYADRTLLLDYC 143

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            R +  +  L   +       A LR       A  +      L +   RG+ Y     L 
Sbjct: 144 RRSADPVGRLLLHLYGITDPLA-LRRSDAICTALQLVNFWQDLSVDLPRGRHYVTDADLA 202

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
             G+DR        S +    +   A    + + +    +  +   V      V      
Sbjct: 203 RFGIDRALLQRRPLSPQARALVADCALWARELMVEGAGLVHQLPGRVGWELRLVVQGGLR 262

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +L   +      +               + +
Sbjct: 263 ILDKVEAMRGDSLWRRPVLGAGDWLRMAVRA 293


>gi|160898014|ref|YP_001563596.1| squalene synthase HpnC [Delftia acidovorans SPH-1]
 gi|160363598|gb|ABX35211.1| squalene synthase HpnC [Delftia acidovorans SPH-1]
          Length = 294

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 71/280 (25%), Gaps = 14/280 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT------RDMRLQWWKDI 83
               +  +A  L PP  R  ++ LY+F      + D                R       
Sbjct: 16  THYENFPVASWLCPPRLRPPIAALYHFARTADDLADEGDATPPERLAALAAYRADLMALG 75

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN----DSIFDCKQF 139
            E     L   +       L   VR + LP     D++ A   D +      +  D  + 
Sbjct: 76  TEGEASMLARTAWPLVFAGLAPQVRAHQLPLALMDDLLSAFAQDVHKTESGTTYADRAEL 135

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y  R ++ +  L   +   +   +          A  +        +   R + Y   
Sbjct: 136 LDYCRRSANPVGRLLLHLYGVDDAESLA-RSDAICTALQLINFWQDFSVDLPRQRHYLTD 194

Query: 200 DILGAVGLDRESFLSGQN--SDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
               A G+  E   +     +  +   +   +      +      +  +   +      V
Sbjct: 195 ADCAAHGVRLEDLRAKPAALTPAVRALLADQSAWARALMLSGAPLVHRLPGRIGWELRLV 254

Query: 258 SITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                 +L          +    T  +   P  +  +   
Sbjct: 255 VQGGLRILDKVDALQGASLYRRPTVGKADAPLLLWRALRM 294


>gi|307325379|ref|ZP_07604581.1| squalene synthase HpnC [Streptomyces violaceusniger Tu 4113]
 gi|306888848|gb|EFN19832.1| squalene synthase HpnC [Streptomyces violaceusniger Tu 4113]
          Length = 287

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 84/285 (29%), Gaps = 21/285 (7%)

Query: 30  DIDYDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTARNP---------------ITR 73
              ++ + +A    P  +R  L  +Y +   +  + D    P                  
Sbjct: 4   KAAHENFPVAPFFLPRAWRTDLMAVYGYARLVDDIGDGDLAPGGADAELLGLDRDRAGDA 63

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  ++       +    E   P    L   V ++ L  + F  +IEA+  D      
Sbjct: 64  LAMLDAFEADLHRVFQPF-GEPRHPLLAALRPTVHRHGLTPEPFRGLIEANRQDQRIRRY 122

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
              ++   Y    ++ +  L   I  +               A  I + +  +     R 
Sbjct: 123 ATYQELLDYCELSANPVGRLVLGITGTASPERIR-HSDAICTALQIIEHLQDVSEDLRRD 181

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + +   G+      + +   R+   +   AE     L +    +  +   +   
Sbjct: 182 RVYLPAEDMKRFGVTEADLAAPRGGARLRALVAKEAERAAALLNEGTPLVGSVHGRLK-V 240

Query: 254 FIPVSITES--VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            +   +      L+     G  ++     P +L     + ++  +
Sbjct: 241 LLAGFVAGGRAALRAVAAAGHDVLPGPPRPTKLSLLREVGATLRR 285


>gi|264677383|ref|YP_003277289.1| Squalene/phytoene synthase [Comamonas testosteroni CNB-2]
 gi|262207895|gb|ACY31993.1| Squalene/phytoene synthase [Comamonas testosteroni CNB-2]
          Length = 297

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 76/281 (27%), Gaps = 14/281 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFES-- 86
               +  +A  L PP  R  ++ +Y+F      + D        R  +LQ +    +   
Sbjct: 15  THYENFPVASWLCPPRLRAPIAAIYHFARTADDLADEGQHGTEQRLAQLQQYAADLQQLG 74

Query: 87  ---STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY----NDSIFDCKQF 139
                  L+  +       L   V+ + LP     D++ A   D       D   D  Q 
Sbjct: 75  SAGEAAMLMRTAWPHIFGPLAVQVQAHGLPKPLLSDLLSAFEQDVRMTAAQDRYSDMAQL 134

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y  R ++ +  L   +       A L        A  +      L     R + Y P 
Sbjct: 135 LDYCRRSANPVGRLLLHLYGVANAKA-LIQSDAICTALQLINFWQDLSQDLPRQRHYLPD 193

Query: 200 DILGAVGLDRESFL--SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
             L   G+ R +    +   +  +   +          +      +  +          V
Sbjct: 194 ADLARHGIARSAIKPDAAALTPELQSLLGELNRQARSLMHHGAPLVHQLPGRTGWELRLV 253

Query: 258 SITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                 +L        + +       +L     +  +   +
Sbjct: 254 VQGGLRILDRLDAMQGRNLYQRIKLGKLDMVAMLWKAVRMR 294


>gi|187921664|ref|YP_001890696.1| squalene synthase HpnC [Burkholderia phytofirmans PsJN]
 gi|187720102|gb|ACD21325.1| squalene synthase HpnC [Burkholderia phytofirmans PsJN]
          Length = 288

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 83/268 (30%), Gaps = 6/268 (2%)

Query: 33  YDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKG 90
           Y+ + +A +L P   R  +  +Y        + D    +   R  RL  ++   ++  + 
Sbjct: 6   YENFPVASVLLPKALRAPIGIIYQVVRTAGDIADEGDWSATERHARLADFRAGLDAVAER 65

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
             A        +L  +V QY LP   F D++ A   D   +   D      Y    ++ L
Sbjct: 66  RAAPVHPLLFGKLAGVVAQYKLPLAPFYDLLHACGQDIDTNRYADRAALLDYCRHSANPL 125

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
            HL   ++ +               A  +      +   + + ++Y PL  +    +   
Sbjct: 126 GHLMLHLIGAATPDNLAD-ADAICTASQLISFWLDVSADWKKDRVYLPLTDMRRFNVTEA 184

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESV--LKHAQ 268
              +G   D     +        + L +       I   +    +  +I   +  L+  +
Sbjct: 185 HIANGVADDDWRALMAHEVSFVREMLVRGAPLALRIPGRL-GIELCGAIHGGLRFLERIE 243

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             G+ +       N          + + 
Sbjct: 244 KVGYDVFHERPVLNTFDWCVVAARTVVM 271


>gi|54291341|dbj|BAD62107.1| phytoene synthase-like [Oryza sativa Japonica Group]
          Length = 236

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 58/180 (32%), Gaps = 6/180 (3%)

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQ 177
                       +  +   Y + ++  +  ++  ++           +        GIA 
Sbjct: 44  WILCSLKKTRYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIAN 103

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +  ++  +     RG++Y P D L   GL  E   +G  +++    +K   +    +  
Sbjct: 104 QLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFE 163

Query: 238 KAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +A   +  +      P +  + +   +L   + + +   +      +  +   +  +  +
Sbjct: 164 EAERGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKLLALPVAYGR 223


>gi|256783793|ref|ZP_05522224.1| phytoene synthase [Streptomyces lividans TK24]
 gi|289767675|ref|ZP_06527053.1| squalene synthase HpnC [Streptomyces lividans TK24]
 gi|289697874|gb|EFD65303.1| squalene synthase HpnC [Streptomyces lividans TK24]
          Length = 303

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 76/277 (27%), Gaps = 17/277 (6%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
             +  D +  +A    P  +R  L  +Y F   +  + D    P   D RL         
Sbjct: 17  LAKAADENFPVAPFFLPRAWRTDLMAVYGFARLVDDIGDGDLAPGGADARLLGVPEDRAD 76

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                   ++        G       P    L+  VR+  L  + FL +I A+  D    
Sbjct: 77  DRLLMLDAFEADLRRVFDGSDGAPRHPLLRRLVPTVRRRALTPEPFLGLIAANRQDQLVA 136

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                     Y    ++ +  L   +  +       R       A  I + +  +     
Sbjct: 137 RYETYDDLLAYCELSANPVGRLVLAVTGTSTPERIRR-SDEICTALQIVEHLQDVAEDLG 195

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           R ++Y P + +    +      +   +  +   I   A      L +    +  +   + 
Sbjct: 196 RDRIYLPAEDMKRFRVQEADLAAPSANASVRALIAYEAARARDLLNEGAPLVGSVHGRLR 255

Query: 252 PAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
                 V+   + L         ++       ++   
Sbjct: 256 LLLAGFVAGGRAALNAIAAADHDVLPGPPKSGKVHLL 292


>gi|325972501|ref|YP_004248692.1| Phytoene synthase [Spirochaeta sp. Buddy]
 gi|324027739|gb|ADY14498.1| Phytoene synthase [Spirochaeta sp. Buddy]
          Length = 284

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 11/261 (4%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-ARNPITRDMRLQWWKDIFE 85
             R+     Y +    PP+ R  +  LY F      + D    +P       + + +   
Sbjct: 9   IFRNGSKTYYFSSRFFPPVVRRDVYALYGFVRVADNLVDDQPVDPDAFHAFRKTYTEALT 68

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
           S        S        L +  +      +    +++   D    +     +   Y + 
Sbjct: 69  SGKA-----SGDVIIDAFLELQNRKHFDPAWTEAFLDSMEHDLSARTCESLDEVLTYIYG 123

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            +  +      I+D    +    V+   G A      I  +      G+ Y PL   G  
Sbjct: 124 SAEVIGLYMARIMDLSEEAFGYAVM--LGRAMQYINFIRDIKEDLEIGRRYLPLGGSGLT 181

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVL 264
            LD E        ++    I+   +    +  +A++  R+I      P      +     
Sbjct: 182 SLDSEYVQQHP--EQFKTFIRDEIKRYQHWQKEAQKGYRFIPRRYRIPIMTAADMYCWTA 239

Query: 265 KHAQNHGFKIVSHSHTPNQLV 285
                  F +      P +  
Sbjct: 240 HQIAKDPFIVFEKKVKPPKAR 260


>gi|330752288|emb|CBL87243.1| phytoene synthase [uncultured Sphingobacteria bacterium]
          Length = 282

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 91/278 (32%), Gaps = 25/278 (8%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
             R       +       +YR  +  +Y F      + DT  +   + +  ++  D +E+
Sbjct: 20  ITRRYSTSFSMGIRAFDKIYRSPIYSIYGFVRFADEIVDTFHDQDKKYLLDKFRFDTYEA 79

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
             + +   S++P      ++V +Y++        +++   D Y+    D    + Y +  
Sbjct: 80  IERKI---SLNPVLEAFQNVVNKYNIGVDLIDAFLDSMEMDLYDIDF-DEPLLKKYIYGS 135

Query: 147 SSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDIL 202
           +  +  +   +          R        G A      +  +   Y  RG+ YFP    
Sbjct: 136 AEVVGLMCLKVFCQGNQKEYERLVKPACALGSAFQKVNFLRDMKSDYDFRGRTYFPNV-- 193

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITE 261
                    FL+  +SD+I+        +  +    A + ++ +        +       
Sbjct: 194 --------DFLTFSSSDKIT-----IERVVQEEFDVAYDGIKELPSGARLGVYTAYKYYR 240

Query: 262 SVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           ++    +     +I  +        +   + SS++K R
Sbjct: 241 ALFNKIKLADVAEIKENRIRIPNSRKLILLGSSALKNR 278


>gi|187923873|ref|YP_001895515.1| squalene/phytoene synthase [Burkholderia phytofirmans PsJN]
 gi|187715067|gb|ACD16291.1| Squalene/phytoene synthase [Burkholderia phytofirmans PsJN]
          Length = 292

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 76/273 (27%), Gaps = 5/273 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    E         +P     +L WW+
Sbjct: 23  EYCQQKAAPPGSSTYYALRQAPAASQPLLTALFALRREFEETVKETSDPAIGRTKLAWWQ 82

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
           +   +           P S  L + +            ++     D       D      
Sbjct: 83  NELAALAA---GTPSHPVSKALAAYLPDVKAEYPMLQALLAGFEMDLDQARYLDYPNLRR 139

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y   +      L       +   AS         A  + Q + +       G++Y P+D 
Sbjct: 140 YVQGVGGTFASLVARATAKDAAQASTWSAALG-EALLLAQFVVETGNDARHGRIYIPIDE 198

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSIT 260
           +    +     ++ + SD  +  ++   +     L  A   +               ++ 
Sbjct: 199 MQRFNVTAADLINRKYSDAFTELMRFETKRARDALQTALGAVPAGERRTQRTLVAQAALA 258

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            ++L   +  G+ ++        + + W    +
Sbjct: 259 LALLDEIERDGYHVLHQRIALTPIRKLWIAWRA 291


>gi|300771317|ref|ZP_07081193.1| phytoene synthase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761987|gb|EFK58807.1| phytoene synthase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 283

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 74/291 (25%), Gaps = 25/291 (8%)

Query: 15  KIFSRDSLFV-LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           KIF+  S     +  +        A  +        +  +Y F      + D+      +
Sbjct: 5   KIFNELSRLCSKKVTQLYSTSFSSAISVLHADLHRPIYSIYGFVRLADEIVDSFHGYNKK 64

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
            +   + +D            SI+P       +V  Y + + Y     E+ + D      
Sbjct: 65  SLLDDFKRDT---FGAIQSGVSINPVLHSFQWVVNTYHIDHHYIHAFFESMYADLDKKVW 121

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASL---RVIKYAGIAQFIGQLICQLPIH- 189
            D  +   Y +  +  +  +   I                +  G A      +  L    
Sbjct: 122 KDQNELNAYIYGSAEVVGLMCLHIFCEGDQELIKKLTPSAQALGAAFQKVNFMRDLREDT 181

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           Y  G+ YF    +                           +   K   +A + +  +   
Sbjct: 182 YDLGRRYFHDIQMDQFD---------------KDTKIKIEQQITKDFEQAFDGLMQLPAK 226

Query: 250 VF-PAFIPVSITESVLKHAQN-HGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                 +       + +  +      I++         +   +L  S+  R
Sbjct: 227 SRYGVLLAYRYYLCLFEKIKRLPPENILNKRIRVPDYQKLLLLLRISLGSR 277


>gi|330752195|emb|CBL87153.1| phytoene synthase [uncultured Sphingobacteria bacterium]
          Length = 282

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 90/278 (32%), Gaps = 25/278 (8%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
             R       +       +YR  +  +Y F      + DT  +   + +  ++  D +E+
Sbjct: 20  ITRRYSTSFSMGIRAFDKIYRSPIYSIYGFVRFADEIVDTFHDQDKKYLLDKFRFDTYEA 79

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
             + +   S++P      ++V +Y++        +++   D Y+    D    + Y +  
Sbjct: 80  IERKI---SLNPVLEAFQNVVNKYNIGLDLIDAFLDSMEMDLYDIDF-DEPLLKKYIYGS 135

Query: 147 SSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDIL 202
           +  +  +   +          R        G A      +  +   Y  RG+ YFP    
Sbjct: 136 AEVVGLMCLKVFCQGNQKEYERLVKPACALGSAFQKVNFLRDMKSDYDFRGRTYFPNV-- 193

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITE 261
                    FL+  +SD+I+        +  +    A   ++ +        +       
Sbjct: 194 --------DFLTFSSSDKIT-----IERVVQEEFDVAYNGIKELPSGARLGVYTAYKYYR 240

Query: 262 SVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           ++    +     +I  +        +   + SS++K R
Sbjct: 241 ALFNKIKLADVAEIKENRIRIPNSRKLILLGSSALKNR 278


>gi|302557117|ref|ZP_07309459.1| squalene synthase HpnC [Streptomyces griseoflavus Tu4000]
 gi|302474735|gb|EFL37828.1| squalene synthase HpnC [Streptomyces griseoflavus Tu4000]
          Length = 300

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 77/275 (28%), Gaps = 17/275 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL----------- 77
           +  D +  +A    P  +R  L  +Y F   +  + D    P   D RL           
Sbjct: 16  KAADENFPVAPFFLPRSWRDDLMAVYGFARLVDDIGDGDLAPGGADARLLGVSEEDAGDR 75

Query: 78  ----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
                 ++                P    L   VR++ L    FL +I A+  D      
Sbjct: 76  LLLLDAFEADLHRVFDPAGPGPGHPLLRRLRPTVRRHALTPGPFLGLIAANRQDQLVKRY 135

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                   Y    ++ +  L   +  +       R       A  I + +  +     R 
Sbjct: 136 ETHDDLLAYCELSANPVGRLVLAVTGTSTPERIRR-SDAICTALQIVEHLQDVAEDLGRD 194

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P   +    +      +      +   +   AE   + L +    +  +   +   
Sbjct: 195 RVYLPAADMKRFHVQEADLAAATAGASVRALVAYQAERARELLNEGAPLVGSVHGRLRLL 254

Query: 254 FI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
               V+   + L+      + ++     P ++   
Sbjct: 255 LAGFVAGGRAALRAIAAAEYDVLPGPPKPGKVQLL 289


>gi|94496008|ref|ZP_01302587.1| Squalene/phytoene synthase [Sphingomonas sp. SKA58]
 gi|94424700|gb|EAT09722.1| Squalene/phytoene synthase [Sphingomonas sp. SKA58]
          Length = 318

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 90/280 (32%), Gaps = 10/280 (3%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDM 75
                ++        +A  L     R     LY +      + D                
Sbjct: 14  AHARDSIARGSKSFAMASKLFDRQTRERAWLLYAWCRTCDDIADGQDHGGAMSVVADAQA 73

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RL   + + + + +G       P       ++R+  +P++Y  D+IE    D+ +     
Sbjct: 74  RLSDMRVMTDRALRGEPT--GDPAFDGFGLVMRECRIPHRYAHDLIEGFALDARDWRPRS 131

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYS-ASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                 Y + ++  +  +  +++  + +  A+L      G+A  +  +   +       +
Sbjct: 132 QDDMLRYCYHVAGAVGCMMAVLMGVDPHDDATLDRACDLGLAFQLANIARDIGEDEAADR 191

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            Y P++ L  + +     +      R+++  +   ++   Y   AR     + P    A 
Sbjct: 192 CYLPVEWLVEMDIPPGEHMKPWVRPRLAILGRRLTDMAAAYEDSARHGTGMLPPRAAWAV 251

Query: 255 IPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +  + I   + +     G     H     +  +  ++  +
Sbjct: 252 LAAAGIYGDIARTVARRGPMAWDHRVVTRKSDKLMWVARA 291


>gi|302526350|ref|ZP_07278692.1| squalene synthase HpnC [Streptomyces sp. AA4]
 gi|302435245|gb|EFL07061.1| squalene synthase HpnC [Streptomyces sp. AA4]
          Length = 262

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 82/264 (31%), Gaps = 7/264 (2%)

Query: 37  LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
           +A  + P   R  L  +Y     +  + D A         L+ +     ++      E  
Sbjct: 1   MALRVLPEQLRADLVAVYSVARTVDDLGDEAEGDRVAQ--LEAFSSELSAAFGN--GEPE 56

Query: 97  SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATM 156
            P    LL  +R   L  + F  +++A+  D              Y    +  +  +   
Sbjct: 57  DPAVRGLLPAIRAGRLTEEPFQRLVQANIQDQRVHRYPVFADLLAYCRLSADPVGRIVLD 116

Query: 157 ILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQ 216
           +L     +A   +         + +    +   Y  G++Y P + L   G+  E   +  
Sbjct: 117 LLGVADPAA-AGLSDRICTGLQLVEHWQDVGEDYRNGRIYLPQEDLAEFGVAEEELGAAH 175

Query: 217 NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESVLKHAQNHGFKIV 275
            S R+   ++         L    + + Y+      A    ++   + +   +  G  ++
Sbjct: 176 ASPRLKALMRWETGRAAALLGSGADLLGYLSGWGRFAVSGFLAGGLATVDALRASGGDVL 235

Query: 276 SHSHTPNQLVRP-WYMLSSSIKKR 298
           S    P++     W        +R
Sbjct: 236 SAPVRPSRAGLLSWLGWLQVGTRR 259


>gi|225684513|gb|EEH22797.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 413

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 99/369 (26%), Gaps = 83/369 (22%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
            + +  +     + L  LR  D   Y      P         L  F+  L  + DT    
Sbjct: 48  ERAKAEYESAHEYCLDLLRKYDRPSYTLSTFIPSQTVNFYLALRAFNISLSMIPDTISTL 107

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQ----------YDLPNQYFLDM 120
               MRLQ+W+D    +  G       P ++ L S +              +   +FL M
Sbjct: 108 TVGLMRLQFWRDTITRTLAGSP--PREPIAILLASALSDLDTRTQANGGARISKSWFLRM 165

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIG 180
           I +      N         E YA    S L++L    L     +A   +  + G A  I 
Sbjct: 166 INSREQYLTNTPYTTLSTLESYAENTYSTLLYLTLSALPLTSLTA-DHLASHIGKAAGIS 224

Query: 181 QLICQLPIHY---------------------------HRGQLYFPLDILGAVGLDRESFL 213
            ++  +P+                               G +  PLD++   GL  E   
Sbjct: 225 AVLRGIPLIAFPPPPSHHFKQAGGLDGLRGGGNGAPTRSGAITLPLDVMAETGLKEEDVF 284

Query: 214 S-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILP------------------------ 248
             G  +  +  A+   A     +L  AR+ +  +                          
Sbjct: 285 RHGAEAPGLRDAVFTVATRASDHLITARQMLTNLRGGKDVGHGFEHEGEEGHEYANTNSN 344

Query: 249 ------------------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                               F   +P   T   L   Q   F I            PW  
Sbjct: 345 AKGNGGTSNLDVQLEEVERAFGVLMPAVSTSLWLDRLQAVDFDIFKPELRMFDWKLPWKA 404

Query: 291 LSSSIKKRF 299
             +  ++ F
Sbjct: 405 YWAHRRRTF 413


>gi|311744997|ref|ZP_07718782.1| phytoene synthase [Algoriphagus sp. PR1]
 gi|126577504|gb|EAZ81724.1| phytoene synthase [Algoriphagus sp. PR1]
          Length = 280

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 85/291 (29%), Gaps = 26/291 (8%)

Query: 12  KEEKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
            + ++F + S    + + +       L        + + +  +Y F      + DT    
Sbjct: 2   NQRELFDQTSFECSKLITQRYSTSFTLGIKTLDQKFHMPIYAIYGFVRYADEIVDTFHGQ 61

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
               +   + KD + +  + +   S++P       +V QY +        + +   D   
Sbjct: 62  DKESLLSSFKKDAYHAIDQKI---SLNPVLNSFQKVVNQYKIDKNLIEAFLHSMEMDLDY 118

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY---AGIAQFIGQLICQLP 187
            +  D  +++ Y +  +  +  +   +      +   ++       G A      +  + 
Sbjct: 119 TTYDD-SKYQEYIYGSAEVVGLMCLKVFCEGDQAIYDKLKSSACKLGSAFQKVNFLRDIK 177

Query: 188 IHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
             Y  RG++YFP                        +  K   E       +A   ++ +
Sbjct: 178 SDYEERGRVYFPGVDFNHFD---------------KIIKKQIEEDIQDDFDEALIGIQQL 222

Query: 247 LPDV-FPAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSI 295
                F   +     + +    +    + I           +   ++S+  
Sbjct: 223 PQGAKFGVNMAYLYYQKLFNKIKGLPPETITQKRIRIPNSKKFSLLVSTYF 273


>gi|295670545|ref|XP_002795820.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226284905|gb|EEH40471.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 413

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 100/369 (27%), Gaps = 83/369 (22%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
            + +  +     + L  LR  D   Y      P         L  F+  L  + DT   P
Sbjct: 48  ERAKAEYESAHTYCLDLLRKYDRPSYTLSTFIPSQTVNFYLALRAFNISLSMIPDTISTP 107

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQ----------YDLPNQYFLDM 120
               MRLQ+W+D    +  G       P ++ L S +              +   +FL M
Sbjct: 108 TVGLMRLQFWRDTITRTLAGSP--PREPIAILLASALSDLDTRTQANGGARISKSWFLRM 165

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIG 180
           I +      N         E YA    S L++L    L     +A   +  + G A  I 
Sbjct: 166 INSREQYLTNTPYTTLSTLESYAENTYSTLLYLTLSALPLTSLTA-DHLASHIGKAAGIS 224

Query: 181 QLICQLPIHY---------------------------HRGQLYFPLDILGAVGLDRESFL 213
            ++  +P+                               G +  PLD++   GL  E   
Sbjct: 225 AVLRGIPLIAFPPPPIHHFKQAGGLGGLGGSGTGAPTRLGAINLPLDVMAETGLKEEDVF 284

Query: 214 S-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILP------------------------ 248
             G  +  +  A+   A     +L  AR+ +  +                          
Sbjct: 285 RHGAEASGLRDAVFTVATRANDHLITARQMLTNLRGGKDVGHGFEHEGEEGHEYANTNGN 344

Query: 249 ------------------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                               F   +P   T   L   Q   F I            PW  
Sbjct: 345 AKGNGGTSNLDVQLEEVERAFGVLMPAVSTSLWLDRLQAVDFDIFKPELRTFDWKLPWKA 404

Query: 291 LSSSIKKRF 299
             +  ++ F
Sbjct: 405 YWAHRRRTF 413


>gi|226532946|ref|NP_001151045.1| phytoene synthase [Zea mays]
 gi|195643862|gb|ACG41399.1| phytoene synthase [Zea mays]
          Length = 316

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 96/295 (32%), Gaps = 14/295 (4%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +R +R  DY  YL  L   P    +      F+ E  R  D   +P    M 
Sbjct: 24  LRTALSYYVRQVRAYDYHHYLCLLHLAPAVCKAAFTFRAFNIETARAMDVVFDPRAGLMC 83

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS---YNDSI 133
           L WWK+  +      + E   P +  L SI+  + +   +    +EA   D+        
Sbjct: 84  LLWWKEGVDKIFGNKLVE--HPVAQALSSIIADHKVSKHWLKRSVEARINDANREEGTIP 141

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               + E Y     S ++++       +   A          +  +  L         +G
Sbjct: 142 RTSVKLERYVEDTQSTILYMTLQAGRIQSTVADHAASHIGKASGLLLLLKALPHHVNKQG 201

Query: 194 QL-YFPLDILGAVGL---DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
            + Y P  +    GL           +  +R+   +   A +   +L KARE    +  +
Sbjct: 202 TVHYIPASVAEECGLLITREGGRSEVRAGERLLDVVFKVASVAEAHLHKARELAPSVPKE 261

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHT-----PNQLVRPWYMLSSSIKKRF 299
             P  +P    + +L   +   F +     +      + L     +  ++ + R+
Sbjct: 262 AIPVLLPALPAQVLLDTLRRCEFNVFDPWLSRGVHGVSPLWYQLKLNWNAWRSRY 316


>gi|15679796|ref|NP_276914.1| phytoene synthase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2622940|gb|AAB86274.1| phytoene synthase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 299

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 74/261 (28%), Gaps = 9/261 (3%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
             +      + + L  P   R  +  LY F  +     D             +++ +   
Sbjct: 24  IFKRGSKTYFYSTLFFPKDVRRDVFILYSFLRKADDYVDRVPQDTDG-----FYEFVERY 78

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                   +        + +  + +  +++    + +   D    S       E Y    
Sbjct: 79  RRAYSGEITGDVVVDSFVELSERKNFEDEWTEAFLRSMEMDITVSSYSTMSALEEYLLGS 138

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           S  +      I+    ++ S    +Y G A      I  +      G+LYFP+D L   G
Sbjct: 139 SEVVGLFMASIM--GLHTDSYHHARYLGRAMQYVNFIRDIAEDIELGRLYFPMDELERFG 196

Query: 207 LDRESFLSGQNSD-RISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITESVL 264
           L        +  +      ++   ++   +   A    RYI    + P      +     
Sbjct: 197 LQSLDPDEIRGREDNFRSFLRAQIDIYRDWQRTAERGYRYIPYRYLVPIKTAADMYMWTS 256

Query: 265 KHAQNHGFKIVSHSHTPNQLV 285
           +  +     + S    P+   
Sbjct: 257 RIIERDPMIVYSRKVKPSGGR 277


>gi|220934697|ref|YP_002513596.1| putative phytoene synthase-like protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996007|gb|ACL72609.1| putative phytoene synthase-like protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 299

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 83/281 (29%), Gaps = 7/281 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            ++   R     +   R    +  +A  L P   R  ++ +Y F      + D    P  
Sbjct: 5   PDREIRRAYAQCIDKARAHYENFPVASRLLPARLRGPVAAIYLFARRADDLADEGSLPAE 64

Query: 73  RDMR-LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
             +R L   +    ++ +  + +   P  + L   +R + LP   F D++ A   D    
Sbjct: 65  ARLRALDELEQQLLAAAESRLDD--DPGFLALAHAIRSHGLPVALFQDLLNAFRQDVNKK 122

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
              D  +   Y    ++ +  L   +        SL        +  +      L   YH
Sbjct: 123 RYGDFGELMQYCRLSANPVGRLLLHL-VGHTDKRSLAWSDAICSSLQLINFYQDLSQDYH 181

Query: 192 -RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
             G++Y P D +   G+         +   +   + +      + L         +    
Sbjct: 182 EMGRIYLPQDEMARFGVTERHIAEAISDMSMQRLMHLQFTRADRLLRSGAPLGGVLKGRF 241

Query: 251 FPAFIPVSITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                 +++    VL H +     + S             +
Sbjct: 242 GLEIRLITLAGARVLWHLRRQQSNLFS-RPRLRLADYAVIL 281


>gi|68305016|gb|AAY90027.1| predicted phytoene synthase [uncultured bacterium BAC13K9BAC]
          Length = 274

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 90/280 (32%), Gaps = 39/280 (13%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +  S      L+      ++A L  P   +  +  +Y F        D  R+  T +  
Sbjct: 1   MAESSNH---ILKQNSKTFHVASLFLPKNIKKKVLSVYAFCRLYDDNVDHKRSVNTSE-- 55

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
                                     L   ++ Y +  +    + E    D Y++ I   
Sbjct: 56  --------------------------LEQKIKNYGIDEKVIGQLKEGIDSDMYSNRISSM 89

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +   +Y ++++  +  +   +L+     A    I   GIA  I  +   +   +   ++Y
Sbjct: 90  EDLLNYCYKVAGCVGIMMCDVLNITDKRAKYHAID-LGIAMQITNICRDIKEDFSMSRIY 148

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
            P D +        S +  + ++++         L  +Y   A E ++YI  +       
Sbjct: 149 LPKDKITK------SEMVSRKNNKLFKITCELIALSNRYYESALEGIKYIPLNTRFSILF 202

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            + + + +    +N+    +       ++ +    + +S 
Sbjct: 203 ALMLYQQIGFKIKNNEESFIIKKANTTKIDKFLVFIKTSF 242


>gi|219114805|ref|XP_002178198.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409933|gb|EEC49863.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 711

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 105/317 (33%), Gaps = 46/317 (14%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD------------- 65
           +D  + +  +R+ D + Y A          +   +  F+ EL  V+D             
Sbjct: 405 KDHQYCVDLVRERDREGYRATK--------AYFAIRAFNVELASVKDSHNLRRREQPGQQ 456

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSV-------------ELLSIVRQYDL 112
            + + +   MR+QWW+D  +   +  ++ +  P                 L    +Q DL
Sbjct: 457 ESSSSVALQMRMQWWRDALKEIYEDEMSVAADPILRNLSVSCWHNPVVRALSQAHQQCDL 516

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY 172
             ++   +I+A  +D          +   YA    S L++LA     +   +A   V  Y
Sbjct: 517 TRRFLERLIDARDYDLSVAQYSSMNEAATYAEDTISSLLYLALECTGTRDDNA-DEVASY 575

Query: 173 AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSD---------RISL 223
           AG+   +   +   P     G++  P D+L       +  +     +             
Sbjct: 576 AGVGIGLTTALRATPFRLMHGEIPIPKDLLRPA-FPYQELMKQTEEEYTLIESDAIAFRE 634

Query: 224 AIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH-TPN 282
           A++  A      L +AR+   ++        +PV  +   L   +   + +         
Sbjct: 635 AVRHMANAASTSLARARDIQGHVPRHARACLLPVVPSIHFLSKLEGVDYHLFDPKLNDDT 694

Query: 283 QLVRPWYMLSSSIKKRF 299
           +L     M  + +   F
Sbjct: 695 RLRLMLLMGRTWLTGIF 711


>gi|330834900|ref|YP_004409628.1| squalene/phytoene synthase [Metallosphaera cuprina Ar-4]
 gi|329567039|gb|AEB95144.1| squalene/phytoene synthase [Metallosphaera cuprina Ar-4]
          Length = 282

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 84/271 (30%), Gaps = 13/271 (4%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
              R      Y + L  PP  R  ++ LY F      + D+    +     L+   +   
Sbjct: 7   EIFRKGSTTYYNSTLFFPPHIREDVTKLYAFVRVFDDLVDSVPQRVQEFYNLRRLYERQR 66

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
                   E+ +      + ++R+ +    +    +++   D Y    +   +   Y + 
Sbjct: 67  D-----GEETGNVVLSSFVELMRRKNFEESWVEAFLDSMESDIYKKVYYSLDETLKYMYG 121

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            +  +      +   +    S    +  G +      I  +    + G+ Y P D +   
Sbjct: 122 SAEVIGLFMMRV--LDLPEESRNYARMLGRSMQYLNFIRDVKEDQYLGRTYLPKDEMEEF 179

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVL 264
           G+      S + + + S  I+      L +   A    +YI    + P      + +   
Sbjct: 180 GVS-----SLECTPQFSEFIRFQVNRYLSFERGAERGYKYIPRRYLIPIKTASDMYKWTG 234

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
              + +   ++S    P +      +  + I
Sbjct: 235 MMIKAYPCLVLSRKVKPRRSRIVSSVFKNYI 265


>gi|251773056|gb|EES53612.1| putative phytoene synthase [Leptospirillum ferrodiazotrophum]
          Length = 322

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 89/287 (31%), Gaps = 10/287 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                            +  +A LL P   R +++ LY F      + D   +  T    
Sbjct: 4   LEESYRHCQEVTASHYENFPVASLLMPARTRPAIAALYAFARAADDMSDEIPDTKTSLSL 63

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  W+++ +   +        P    L   +R++DLP  +   +I+A   D       + 
Sbjct: 64  LAGWRELLQ---RAQKGPVDHPVFRALADTIRRFDLPVLWLDHLIQAFERDRTVVRHENL 120

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           +    Y+   ++ +  L   I           +      A  +      + +   +G+LY
Sbjct: 121 EDLIFYSTLSANPVGRLLLWINGYRD-ECLFAMSDAICTALQLANFWQDISVDREKGRLY 179

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISL----AIKIFAELGLKYLFKAREEMRYILPDVFP 252
            PL  L A GLD ES  S  ++  +S                         R +   +  
Sbjct: 180 VPLSELRAAGLDEESLFSSPDNPDLSRRQQILKDRLFAYTAGLFSTGVPLPRAVGGRIGL 239

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              + +    ++L+       + V+      +      +L    + R
Sbjct: 240 ELALVLRGGVTILEK-GQAPGRPVTRRPVLTRGTWLASLLRPVTRDR 285


>gi|255531987|ref|YP_003092359.1| Phytoene synthase [Pedobacter heparinus DSM 2366]
 gi|255344971|gb|ACU04297.1| Phytoene synthase [Pedobacter heparinus DSM 2366]
          Length = 278

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 78/277 (28%), Gaps = 25/277 (9%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
            +       L  L   P  R ++  +Y +      + D+ +    ++  L   K   E+ 
Sbjct: 17  TQKYSTSFSLGILALKPSVRSAIYAIYGYVRLADEIVDSFQGYD-KEKLLNRLKQETEN- 74

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                  S++P        V +Y +  +   D + +   D           +  Y +  +
Sbjct: 75  -ALQEGISLNPILQSFQETVHKYRIEKKLIEDFLHSMEMDLQKIDYNS-DLYNEYIYGSA 132

Query: 148 SRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILG 203
             +  +   +                   G A      +  L   Y   G+ YFP   +G
Sbjct: 133 EVVGLMCLQVFTDGNREKYEDLKLYAMKLGSAFQKINFLRDLRDDYQILGRTYFPNIDMG 192

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVSITES 262
                 +  +  +                 +   +A   ++ +     F  ++      S
Sbjct: 193 VFDNHVKCLIEKEI---------------EEEFKEALIGIKKLPGSSMFGVYLAYKYYLS 237

Query: 263 VLKHA-QNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           + K   +     I+++        + +    S ++ +
Sbjct: 238 LFKKIKRKSSKDILNNRVRIPNSEKAFVAFKSYVRYK 274


>gi|73538778|ref|YP_299145.1| squalene/phytoene synthase [Ralstonia eutropha JMP134]
 gi|72122115|gb|AAZ64301.1| Squalene/phytoene synthase [Ralstonia eutropha JMP134]
          Length = 301

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 10/267 (3%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             + A  + P   R ++  +Y F   +  + D       R   L  W+        G+  
Sbjct: 39  SFHAAMRILPAAQRQAMFEIYAFCRAVDDIADCDAPHAERLAGLDAWRRDIGLCYAGMAP 98

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            ++ P + +    +  + L  Q FLD+I+    D   D    D    + Y  R++S +  
Sbjct: 99  SALRPLAQQ----IEAFHLRQQDFLDVIDGMTMDVVADIRAPDADTLDLYCDRVASAVGR 154

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD---R 209
           LA  +   +       +  + G A  +  ++  +      G+LY P   L A G+     
Sbjct: 155 LAVRVFGMDEAPGLA-LAHHLGRALQLTNILRDIDEDAAIGRLYLPAPALAAAGVQGLEH 213

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQ 268
            + +       I  A    A     +  +A   M       V    I   +   +L   +
Sbjct: 214 ATPMEVIAHAGIDAACAAVAREAQAHYEQADAVMARCPSRVVRSPRIMSQVYHCLLVRLR 273

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             G++         +    W +L  ++
Sbjct: 274 ARGWRAPRARVRVPRAQLLWIVLRHTM 300


>gi|119476623|ref|ZP_01616933.1| phytoene synthase [marine gamma proteobacterium HTCC2143]
 gi|119449879|gb|EAW31115.1| phytoene synthase [marine gamma proteobacterium HTCC2143]
          Length = 306

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 75/272 (27%), Gaps = 14/272 (5%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            + L       Y A            + LY F   +  + D   +   R   L+  +   
Sbjct: 17  QQILARHGKSFYWASKFLGVALADRAARLYQFCRYVDDLADG--DLPDRQESLEDIRARL 74

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                     S  P     + +    ++P     ++++    D +  ++ D  +   Y  
Sbjct: 75  AGEAI-----SAGPEIEAFMVLANSTNIPLSAATELLDGMLMDQHPTAVADEAELLRYCH 129

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            ++  +  +   +L+ +   A    I   GIA  +  +   +       + Y P      
Sbjct: 130 AVAGTVGLMMCRVLNCKEPRADSFAID-LGIAMQLTNISRDVLEDAKMSRRYLPASW--- 185

Query: 205 VGLDRESFLSGQNS--DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-IPVSITE 261
                      +      ++  I+   +L   Y   A   +R +      A  I + +  
Sbjct: 186 ANFTPAQIAEARLDCQQPVAEGIERLLDLAETYYASALLGLRLLPFRSRFAIAIALRVYR 245

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +    +             +   +    L S
Sbjct: 246 QIGWVLRRRKLAWWRGRVMVSAGEKVVLSLRS 277


>gi|295700636|ref|YP_003608529.1| squalene synthase HpnC [Burkholderia sp. CCGE1002]
 gi|295439849|gb|ADG19018.1| squalene synthase HpnC [Burkholderia sp. CCGE1002]
          Length = 288

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 3/262 (1%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRV-RDTARNPITRDMRLQWWKDIFESSTKGLI 92
           +  +A +L P   R  +  +Y        +  +   N   R  RL  ++   ++  +   
Sbjct: 8   NFPIASVLLPKALRAPVGIIYQVVRTAADISAEGQWNAAERHARLADFRAGLDAIAQRRA 67

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
           A   +    +L  ++ QY+LP + F D+++    D       D  +   Y  R +  + H
Sbjct: 68  APVHALLFGKLAGVIAQYELPLEPFYDLLDGCAQDIDTHRYADRAELVDYCRRSAHPVGH 127

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           L   ++ +     +L        A  +      +   + R  +Y P   L   G+     
Sbjct: 128 LLLHLVGAATPD-NLADADAICTASQLISFWLDVAADWQRQHVYLPQADLLRFGVTEAQI 186

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHAQNHG 271
             G   D     +          L         +   +              L+  +   
Sbjct: 187 ADGVVDDAWRALMAHEIAFVRATLISGAPLALRMPGRLGIELSGAVHAGLRFLERIERAD 246

Query: 272 FKIVSHSHTPNQLVRPWYMLSS 293
           + +       N          +
Sbjct: 247 YDVFRKRPLLNLFDWCVVAART 268


>gi|54026369|ref|YP_120611.1| putative phytoene synthase [Nocardia farcinica IFM 10152]
 gi|54017877|dbj|BAD59247.1| putative phytoene synthase [Nocardia farcinica IFM 10152]
          Length = 450

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 65/218 (29%), Gaps = 10/218 (4%)

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
                  P    L   VR++ +    F   + +   D            + Y +  +  +
Sbjct: 186 QPVVPAQPVVTALADTVRRHRIDPALFAAFLTSMRMDLEVRDYPTRAALQRYTYGSAQVI 245

Query: 151 IH-LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
              L  ++      + +       G A  +   +  +     RG++Y P D L A G+DR
Sbjct: 246 GLQLLPVLGTVTDTAVAAPFAAALGDAFQLTNFLRDVAEDLDRGRVYLPADELAAHGVDR 305

Query: 210 ESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVL 264
           +        G+    +  A+     +       A   +  + P   P       +  ++L
Sbjct: 306 DRLAWCRTRGRPDAAVRAALTGQIAMTRAVYRTAEPGIALLDPMARPCVTTAFRLYAAIL 365

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYML----SSSIKKR 298
              +     + +   T  +  +    L     +   +R
Sbjct: 366 DRIEAADHNVFATRATVGRTRKLGVALPALTRAWWSRR 403



 Score = 69.3 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 27/104 (25%), Gaps = 6/104 (5%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +                     +LA  L PP  R ++  LY F   +  + D       
Sbjct: 12  TDPALRHAYTRCRALNAAHGRTYFLATRLLPPDRRPAVHALYGFARYVDDLVDLPDRDAP 71

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQY 116
                       ++  +  I  +    +  L   VR    P Q 
Sbjct: 72  GSGLAA------DARIRAHIDTAERELTAALARSVRVQPAPAQP 109


>gi|227540537|ref|ZP_03970586.1| phytoene synthase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239619|gb|EEI89634.1| phytoene synthase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 283

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 74/291 (25%), Gaps = 25/291 (8%)

Query: 15  KIFSRDSLFV-LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           KIF+  S     +  +        A  +        +  +Y F      + D+      +
Sbjct: 5   KIFNELSRLCSKKVTQLYSTSFSSAISVLHADLHRPIYSIYGFVRLADEIVDSFHGYNKK 64

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
            +   + +D            SI+P       +V  Y + + Y     E+ + D      
Sbjct: 65  SLLDDFKRDT---FGAIQSGVSINPVLHSFQWVVNTYQIDHHYIHAFFESMYADLDKKVW 121

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASL---RVIKYAGIAQFIGQLICQLPIH- 189
            D  +   Y +  +  +  +   I                +  G A      +  L    
Sbjct: 122 KDQNELNAYIYGSAEVVGLMCLHIFCEGDLELIRKLTPSAQALGAAFQKVNFMRDLREDT 181

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           Y  G+ YF    +                           +   K   +A + +  +   
Sbjct: 182 YDLGRRYFHDIQMDQFD---------------KDTKIKIEQQITKDFEQAFDGLMQLPAK 226

Query: 250 VF-PAFIPVSITESVLKHAQN-HGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                 +       + +  +      I++         +   +L  S+  R
Sbjct: 227 SRYGVLLAYRYYLCLFEKIKRLPPENILNKRIRVPDYQKLLLLLRISLGSR 277


>gi|126178069|ref|YP_001046034.1| squalene/phytoene synthase [Methanoculleus marisnigri JR1]
 gi|125860863|gb|ABN56052.1| Squalene/phytoene synthase [Methanoculleus marisnigri JR1]
          Length = 274

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 71/262 (27%), Gaps = 9/262 (3%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
              R      + + L  PP  R  +  LY F        D     I      +++     
Sbjct: 8   NIFRRGSRTYFYSTLFFPPAVREDVFSLYSFVRTADDYVDAVPQEIE-----EFYAFADR 62

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
            +       +        + +  +      +    + +   D    S    +  E Y + 
Sbjct: 63  YAAAEAGEATGDVVVESFVDLAGRKGFDPAWTTAFLRSMESDIIVGSYRTIRDLEGYLYG 122

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            S  +  +   I   +    S    +  G A      I  +      G+ YFPL+ + A 
Sbjct: 123 SSEVIGLMMARI--LDLPPESYAAAQNLGRAMQYVNFIRDIAEDLALGRTYFPLEEMEAF 180

Query: 206 GLDRESFLSGQNSD-RISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESV 263
           GLD  S  +        +  ++       ++   A     +I      P      +    
Sbjct: 181 GLDDLSAAAASRDPGGFAAFLRFQLRRYREWQEAAEAGFGHIPRRYRIPIRTASDMYRWT 240

Query: 264 LKHAQNHGFKIVSHSHTPNQLV 285
            +  +     +      P+ + 
Sbjct: 241 ARTIERDPAVVHRRKVKPSVIR 262


>gi|253996545|ref|YP_003048609.1| squalene synthase HpnC [Methylotenera mobilis JLW8]
 gi|253983224|gb|ACT48082.1| squalene synthase HpnC [Methylotenera mobilis JLW8]
          Length = 290

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 87/283 (30%), Gaps = 14/283 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-QWWKDI 83
           L        +  +A    P   R  ++ +Y F  +     D     I + + L   ++D 
Sbjct: 10  LDLASRHYENFPVASCFLPESLREPIALIYSFARQADDFADEGDLTIEQRLNLITGFRDE 69

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            +     +  +S   F + L  ++R+  LP   F D+++A   D       D +    Y 
Sbjct: 70  LDLLQAYIKPQSA--FFMTLGQMIRERKLPLVPFYDLLDAFSQDVTKTRYADYEDVLDYC 127

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG----QLYFPL 199
            R ++ +  L   +        ++    +   A  +   +  + I + +     ++Y   
Sbjct: 128 ARSANPIGSLLLHLYHQATPE-NITYSNHICSALQLINFLQDIAIDFKKNEGKQRIYLCQ 186

Query: 200 DILGAVGLDRESF-----LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           D + A G+  ++            D     +          L   +   + +   +    
Sbjct: 187 DEMAAFGITEQTIGAYVHAKQPIDDYWQQFMHFNLRRVHALLNSGKPLGKILRGRIGFEM 246

Query: 255 IPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             V +  E ++         + +     N          + +K
Sbjct: 247 RMVIAGGERIIHKISAVNGDVFNRRPKLNYWDWAIVFSKALLK 289


>gi|119713730|gb|ABL97779.1| crtB phytoene synthase [uncultured marine bacterium HF10_29C11]
          Length = 315

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 83/284 (29%), Gaps = 22/284 (7%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            L       + A            + LY F   L  + D   +       L   +     
Sbjct: 17  ILATSGESFHWARRFLGKKMGHDAARLYSFCRVLDDMADG--DIQNGPEHLVEIQAKLNQ 74

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA-HFFDSYNDSIFDCKQFEHYAFR 145
              G       P   +   +V +Y L       ++E      +    I D  +   YA++
Sbjct: 75  EQWG-----EHPLLDQFSDMVDEYGLSTTVVSSLVEGLLDDQADEVLIADKSELIQYAYK 129

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
           ++  +  L   +L+++   A    +   GI   +  +   +      G+ Y P   +   
Sbjct: 130 VAGTVGLLMCDVLNTDEPRAKPHAVD-LGIGMQLTNIARDVLEDAKMGRRYLPGSWVN-- 186

Query: 206 GLDRESFLSGQNSD------RISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIPVS 258
            +  +  +    S        I+ A+     L  +Y    R  + Y+     F   +   
Sbjct: 187 NMTPQQIIEASKSPYSHEALMITEAVHRLLSLAEQYYASGRRGLAYLPARAHFSIGVAAK 246

Query: 259 ITESVLKHAQNHGFKIVSHSHTP-NQLVRPWYMLSSSIK--KRF 299
           +   +                   ++  + +  + +S+   +RF
Sbjct: 247 VYRQIGIQLLRTK-DSWHGRRQVTSKSSKVFCTIRASMSLFRRF 289


>gi|227826799|ref|YP_002828578.1| squalene/phytoene synthase [Sulfolobus islandicus M.14.25]
 gi|229583980|ref|YP_002842481.1| Squalene/phytoene synthase [Sulfolobus islandicus M.16.27]
 gi|238618919|ref|YP_002913744.1| Squalene/phytoene synthase [Sulfolobus islandicus M.16.4]
 gi|227458594|gb|ACP37280.1| Squalene/phytoene synthase [Sulfolobus islandicus M.14.25]
 gi|228019029|gb|ACP54436.1| Squalene/phytoene synthase [Sulfolobus islandicus M.16.27]
 gi|238379988|gb|ACR41076.1| Squalene/phytoene synthase [Sulfolobus islandicus M.16.4]
          Length = 278

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 28/275 (10%), Positives = 84/275 (30%), Gaps = 14/275 (5%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
              ++     Y +    PP  R  ++ LY F      + D+    +     L+   ++ +
Sbjct: 7   EIFKNGSVTYYNSSYFFPPRVREDVTKLYAFVRIFDDLVDSVPQRVEEFYNLRKLYNLEK 66

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
                      +     ++ +  +    + +    + A   D Y  S +  ++   Y + 
Sbjct: 67  KGYST-----GNIVLRNMVELSMRKGFDDSWVEAFLNAMESDIYKKSYYTIEELLKYMYG 121

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            +  +      I   +    S+   +  G A      I  +    + G+ Y P++ +   
Sbjct: 122 SAEVIGLFMMKI--LDLPDDSMHYARMLGRAMQFLNFIRDVQEDLYLGRQYLPIEDMEKF 179

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVL 264
           G+++        S      ++       ++  +A    ++I    + P      + +   
Sbjct: 180 GINKMD-----CSQGFEEFMRYEINRYFEFETEAERGFKFIPARYLVPIKTASEMYKWTA 234

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              +     ++S      +  +       ++   +
Sbjct: 235 LRIRKSPCVVLSKKVK-PKRRKIVVTAIKNMAGVY 268


>gi|119713547|gb|ABL97599.1| crtB phytoene synthase [uncultured marine bacterium EB0_39F01]
          Length = 274

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 78/263 (29%), Gaps = 24/263 (9%)

Query: 49  SLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR 108
             + LY F   L  + D   + I    RL   +D    + +        P  +E    + 
Sbjct: 4   DAAILYRFCRVLDDMADG--DIIDGPERLFKIRDGLLKNYQT-----DDPLLIEFELFIT 56

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
              LP    + +I+    D     I +  +   Y +R++  +  L   +LD +   A   
Sbjct: 57  SKKLPKLVIISLIDGLLGDQEIVLIKNEFELLRYCYRVAGTVGILMCNVLDCDETDAIDY 116

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK-- 226
            I   GIA  +  +   +      G+ Y P   +G   +  E  +      +   A    
Sbjct: 117 AID-LGIAMQLTNIARDILEDAQMGRRYLPESWVG--DVTPEEIVQISQHPKSKRAQDIC 173

Query: 227 ----IFAELGLKYLFKAREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTP 281
                   L  +Y         Y+      A  +   +   +    +N G+   +     
Sbjct: 174 IGSKKLLNLAEQYYTSGLTGCAYLPLRAHAAISVAALVYRQIGIKTKNKGYPWFNGREFT 233

Query: 282 NQLVR-------PWYMLSSSIKK 297
           +   +          +     KK
Sbjct: 234 STSEKIICSFFGLLILYKRLFKK 256


>gi|257094811|ref|YP_003168452.1| squalene synthase HpnC [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047335|gb|ACV36523.1| squalene synthase HpnC [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 269

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 83/260 (31%), Gaps = 5/260 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESST 88
           D   +  +A LL P   R  +  +Y F      + D   +P    ++ L  + D      
Sbjct: 4   DHYENFPVASLLLPRRLRRPIEAIYRFARAADDIADEGDSPDAVRLQGLAEYGDELTRIE 63

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +G     + P   EL +IV ++ LP     D+++A   D       D  +   Y  R ++
Sbjct: 64  RGEP--PLRPAFTELAAIVAEWRLPVPLLRDLLDAFAQDVVKKRYADYPELLDYCRRSAN 121

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   ++ +     +L+   +   A  +      + I + + ++Y P   L    + 
Sbjct: 122 PVGRLLLHLVGTTSDE-NLQRSDWICSALQLVNFWQDVAIDWRKDRVYLPQTDLARFAIA 180

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHA 267
                 G +S   +  +    E   + +      +  +   +             +L+  
Sbjct: 181 EAQIADGCSSAEWAALLDFECERTRRLMLAGAPLVHQLPGRMGWEIRLTVQGGLRILERI 240

Query: 268 QNHGFKIVSHSHTPNQLVRP 287
           +     +             
Sbjct: 241 RQVRGDVFRQRPVLGAGDWL 260


>gi|91780047|ref|YP_555255.1| putative squalene/phytoene synthase [Burkholderia xenovorans LB400]
 gi|91692707|gb|ABE35905.1| putative squalene/phytoene synthase [Burkholderia xenovorans LB400]
          Length = 288

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 6/268 (2%)

Query: 33  YDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKG 90
           Y+ + +A +L P   R  +  +Y        + D    +   R  RL  ++   ++  + 
Sbjct: 6   YENFPVASVLLPKALRAPVGVIYQVVRTAGDIADEGDWSAAERHARLADFRAGLDAVAER 65

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
             A   +    +L  +V QY LP   F D++ A   D   +   D      Y    ++ L
Sbjct: 66  RAAPVHALLFGKLAGVVAQYKLPLAPFYDLLHACAQDIDTNRYADRAALLDYCRHSANPL 125

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
            HL   ++ +     +L        A  +      +   + + ++Y PL  L    +   
Sbjct: 126 GHLMLHLIGAATPE-NLADADAICTASQLISFWLDVSADWEKDRVYLPLADLRRFNVGEA 184

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE--SVLKHAQ 268
              +G         +        + L +       I   +    +  +I     +L+  +
Sbjct: 185 HIANGVADQDWRALMAHEVSFVRQMLVRGAPLALRISGRL-GIELCGAIHGGLRLLERIE 243

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             G+ +       N          +++ 
Sbjct: 244 KAGYDVFRERPELNTFDWCVVAARTAVM 271


>gi|268531940|ref|XP_002631098.1| Hypothetical protein CBG02872 [Caenorhabditis briggsae]
 gi|187037062|emb|CAP23728.1| hypothetical protein CBG_02872 [Caenorhabditis briggsae AF16]
          Length = 492

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/311 (18%), Positives = 106/311 (34%), Gaps = 15/311 (4%)

Query: 2   VLKFLTKNTRK---EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHT 58
           V K + K++R     +   +      L  ++  D D Y A L      +  +  L   + 
Sbjct: 184 VPKSMPKSSRVLEISQTQANDAFRTCLDMIKKQDVDSYQAILTMNKKAQPEIVALNALNV 243

Query: 59  ELMRV---RDTARNPITRDMRLQWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPN 114
           EL  +    DT +   +   RLQ+WKD   S            P ++ L S     +   
Sbjct: 244 ELASIRDKVDTRKGDTSAMYRLQFWKDAISSIYGISPLPVPRQPVAIALCSFASSANPDL 303

Query: 115 QYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRV 169
              L ++E       +    D      Y       L+      LA     ++ +  +  V
Sbjct: 304 --LLKLVETRQSTIGDRQFSDINALCDYGKSTIGSLLCLQIDALARSSTQTKVFPMTYDV 361

Query: 170 IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
            K  G A  I  +I        RG +  P D++   G   +S    +  D      K   
Sbjct: 362 AKGLGAAYAIANIIRATHPLLARGIVLLPADVMSLNGATPDSLYKKKKLDESVGMTKDLV 421

Query: 230 ELGLKYLFKAREEMRYILPDVFPAFIP-VSITESVLKHAQNHGFKIVSHSHTPNQLVRPW 288
               + L  AR ++  +   V PA     + T+ ++K  + + + I S        +  W
Sbjct: 422 NEAKRLLADARRQIDQVPKAVRPALAATGATTDYIIKTVEKNKYDIYSPHLQRQNPLLLW 481

Query: 289 YMLSSSIKKRF 299
            +L  ++  +F
Sbjct: 482 SLLVKNLCSKF 492


>gi|332170674|gb|AEE19929.1| Squalene/phytoene synthase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 279

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 29/292 (9%), Positives = 81/292 (27%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S    + + +        A  +  P  R  +  +Y F      + D+  +   
Sbjct: 2   KSLFDTVSRSCAKVVTQSYSTSFASATKMLAPSIRQDIYNIYGFVRFADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
               L + +   +         S++P        V ++ +  ++    +++   D     
Sbjct: 62  A---LLFERFNQDLKNALEDKISLNPILNAFQETVHKFAIEQEHIDAFMKSMRLDLTKSD 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
                ++  Y +  +  +  +   +           + +     G A      +  L   
Sbjct: 119 YLTDAEYREYIYGSADVVGLMCLTVFVQGDKEQYESLKESAMSLGSAFQKVNFLRDLKAD 178

Query: 190 YH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L  +                  + +       +   K    +  +  
Sbjct: 179 FEGLSRTYFPDTNLHELD---------------EASKQSIIADIEEDFAKGLAGINRLPI 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  +      + +L   +     +I +        V+   +  S +K R
Sbjct: 224 EAKFGVYTAFRYYKKLLTKLKKVPSAEIKNTRVRVPDYVKASLLARSYVKYR 275


>gi|189199744|ref|XP_001936209.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983308|gb|EDU48796.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 337

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 93/319 (29%), Gaps = 62/319 (19%)

Query: 41  LSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFS 100
             P   R +   +  F+ ++ RV DT   P    MR+Q+W+D    +  G   +      
Sbjct: 19  FIPQSSRDAYLAIRAFNVDVARVADTTSTPTIGMMRMQFWRDTVTKALAGTPPKEPVAIL 78

Query: 101 VE------LLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLA 154
           +             +  L   +F  +I        N         E YA    S +++L 
Sbjct: 79  LAQAAEQLHERSAGKARLSKNWFHRIINTREQHLGNPPYPTLSALESYAENTYSTMLYLT 138

Query: 155 TMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-------------------HRGQL 195
              L     +    +  + G A  I  ++  +P+                      +G +
Sbjct: 139 LSALPQASLTT-DHIASHIGKAMGITAVLRGIPLIAFPPQQPLGTSNSMTGQSGPTQGAV 197

Query: 196 YFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD----- 249
             PLD++    +  E     G ++  +  A+   A     +L  ARE +  +  +     
Sbjct: 198 LLPLDVMAEANVREEDVFRQGASAPGLRDAVFTVATRANDHLITAREMLSKLRSEGTLGH 257

Query: 250 ------------------------------VFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
                                          F  F+P   T+S L   Q   F +     
Sbjct: 258 DFEHQHEEEHVYSAQQLNTGQETQLAEVEQAFGVFMPSIATQSWLDRLQKVDFDVFDQRL 317

Query: 280 TPNQLVRPWYMLSSSIKKR 298
                  P     +  ++R
Sbjct: 318 RTVDWKLPVKAYWAYSRRR 336


>gi|60730226|emb|CAI63877.1| putative phytoene synthase [Populus tremula x Populus alba]
          Length = 182

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 8/185 (4%)

Query: 54  YYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLP 113
           Y +      + D           L  W+       +         +   L + V +Y + 
Sbjct: 1   YVWCRRTDELVDGPNASHITPKALDLWEQRLNELFE---GRPYDMYDAALSNTVSKYPVD 57

Query: 114 NQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER-----YSASLR 168
            Q F DMIE    D       D  +   Y + ++  +  ++  ++           +   
Sbjct: 58  IQPFKDMIEGMRMDLKKSRYKDFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTESVYN 117

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                GIA  +  ++  +     RG++Y P + L   GL  E    G+ +D+    +K  
Sbjct: 118 AALALGIANQLTNILRDVGEDARRGRIYLPQEELAQAGLSDEDIFKGKVTDKWRSFMKGQ 177

Query: 229 AELGL 233
            +   
Sbjct: 178 IKRAR 182


>gi|317453461|emb|CBY78075.1| mutant phytoene synthase/carotene cyclase [Neurospora crassa]
          Length = 602

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 93/334 (27%), Gaps = 44/334 (13%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  L  F      +
Sbjct: 269 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLSSFCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI----------------SPFSVELLSIV 107
            D A++               +   K   A                    P + + L ++
Sbjct: 327 VDDAKSRREVLSWTAKLNHFLDLHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALHLL 386

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSI------------FDCKQFEHYAFRISSRLIHLAT 155
             + LP +   D+I+    DS                  D K  E+YA  ++  +  L  
Sbjct: 387 PTHILPPKPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCI 446

Query: 156 MILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
            ++                       GIA     +   + +    G++Y P   L   GL
Sbjct: 447 ALIIYHCLPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGL 506

Query: 208 DRESFLSGQNSDR-ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLK 265
             +  L        I    +   E   +    AR EM+ I  +     I       ++ +
Sbjct: 507 THKMVLENPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAVENYMAIGR 566

Query: 266 HA-QNHGFKIV---SHSHTPNQLVRPWYMLSSSI 295
              +     +        T  +  R   +L +  
Sbjct: 567 VLRERKEGTVFVRMEGRATVPKRRRLSTLLRALY 600


>gi|302522951|ref|ZP_07275293.1| squalene synthase HpnC [Streptomyces sp. SPB78]
 gi|318058277|ref|ZP_07977000.1| putative squalene/phytoene synthase [Streptomyces sp. SA3_actG]
 gi|318076939|ref|ZP_07984271.1| putative squalene/phytoene synthase [Streptomyces sp. SA3_actF]
 gi|302431846|gb|EFL03662.1| squalene synthase HpnC [Streptomyces sp. SPB78]
          Length = 309

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 18/275 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR------------ 76
           +    +  +A    P  +R  L  +Y F   +  + D    P   D R            
Sbjct: 26  KAGAENFPVAPFFVPGSWRADLMAVYGFARLVDDIGDGDLAPGGADARYLDVPEDQAGDR 85

Query: 77  ---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L   +       +        P    L   VR+  L  + F  +I A+  D      
Sbjct: 86  LVLLDALETDLARVFRS-TGTPHHPLLRALRPTVRRRGLVPEPFEALIGANRQDQKVGRY 144

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   Y    ++ +  L   +  +E      R          + + +  +     R 
Sbjct: 145 ATWDELAAYCELSANPVGRLVLGLTGTESDERVRR-SDAVCTGLQLVEHLQDVAEDLRRD 203

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + +    +      + + S  +   I   A+     L +    +  +   +   
Sbjct: 204 RVYLPAEDMTRFHVTEADLAAPRASAPVRALIAFEADRARALLDEGLPLVASVRGRLRLL 263

Query: 254 FI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
               V+   + L    + G  +++ +  P +    
Sbjct: 264 LAGFVAGGRAALAAIADAGNDVLATTPKPTKARLL 298


>gi|134118285|ref|XP_772156.1| hypothetical protein CNBM0760 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254764|gb|EAL17509.1| hypothetical protein CNBM0760 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 338

 Score =  125 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 83/295 (28%), Gaps = 14/295 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                +    ++ +D + +L     P   +        F+ EL  +      P    +R 
Sbjct: 43  QAPLEYCSSLVKKMDPEAWLCSYFWPRREKAWWLAWRAFNLELHSISANVSQPALASIRF 102

Query: 78  QWWKDIFESSTKGLIAE---SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY----N 130
           Q+W+D  +               P +V L  + +   +   Y   +I+            
Sbjct: 103 QFWRDALKGIFAANPQNQIVPQHPVAVLLADMKKHRPVQKYYLNQLIDVRAKALSLPPAA 162

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
            S+                      +       +     + +      +  L+  LPI  
Sbjct: 163 VSLESHLSINSPLSTSLLLGPLPILLPPTHASSAHISHTLSHVSTLLAVVSLLRNLPILI 222

Query: 191 HR-GQLYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREEMRY--- 245
            +  Q+  P DI    G+  E     G  +     A       G+  L  AR +++    
Sbjct: 223 SQKKQISIPADICEKYGIVEEELFRRGAEAKGFRDACWEIGTRGMDELITARRDLKETGG 282

Query: 246 --ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             +   V P F+     E+ LK  + + F +       +       +       +
Sbjct: 283 KVVPSSVMPIFLSAVAPENYLKRLEKYDFDVFHPDIQKHDWQLAPKIWYRYQTGK 337


>gi|170017146|ref|YP_001728065.1| phytoene/squalene synthetase [Leuconostoc citreum KM20]
 gi|169804003|gb|ACA82621.1| Phytoene/squalene synthetase [Leuconostoc citreum KM20]
          Length = 295

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 102/288 (35%), Gaps = 10/288 (3%)

Query: 9   NTRKEEKIFSRDSLF---VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           NT+ +++      +      + ++      Y A    P     S+  LY F  +L    D
Sbjct: 2   NTKAKKQAIDSVLVHLLDSRQAIKKKSSSFYFAFSRLPRYQAFSIFVLYDFLRQLDDAAD 61

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
           T        +   W           +I  S+S    ++  I   +D+  Q  LDMI    
Sbjct: 62  TGNADAFNALVNSW---QTAMIAHDIIVTSLSTIGEKVAYIFHVFDIDAQDMLDMIAGQK 118

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
            D  + S    ++ E Y ++++  +  +   IL  +      + I   GIA  +  +I  
Sbjct: 119 SDLNHVSFETVQELEVYCYQVAGTVGCMIYTILSGKPIQMMKQDIINVGIALQLTNIIRD 178

Query: 186 LPIHYHRGQLYFPLDILG-AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
                   + + P  +L     L  E  +  +  D I  A++  +++ + +   + + ++
Sbjct: 179 FHEDLLAQRCFIPKSLLQFDAELSSEDIMLKKEQD-IKKALQQLSDIAISHYNCSAKIIK 237

Query: 245 YILPD--VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           ++      F   + + + + +L     + F++        +  +    
Sbjct: 238 HLDNKTSQFALELSIEVYKKILLKMIANRFELSDQRVFVTRTEKIMLF 285


>gi|304314145|ref|YP_003849292.1| phytoene synthase related protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587604|gb|ADL57979.1| phytoene synthase related protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 286

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 71/261 (27%), Gaps = 9/261 (3%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
             +      + + L  PP  R  +  LY F  +     D             ++  +   
Sbjct: 9   IFKRGSKTYFYSTLFFPPKVRRDVFILYSFLRKADDYVDRIPQDTGG-----FYDFVERY 63

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                  ++          +  +     ++    + +   D    S       E Y    
Sbjct: 64  RAASSGEKTGDVVVDSFAELSARKAFNKEWTEAFLRSMEMDITVSSYRTMADLEEYLLGS 123

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           S  +      I+  +  S      +Y G A      I  +      G+LYFPL  L    
Sbjct: 124 SEVVGLFMASIMGLDTDS--YPHARYMGRAMQYVNFIRDIAEDVELGRLYFPLTELERFD 181

Query: 207 LDRESFLSGQNSD-RISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITESVL 264
           L+       +  +      ++   ++   +  +A E   YI    + P      +     
Sbjct: 182 LESLDLSEIRGREDNFRSFLRAQIDIYRDWQRRAEEGYSYIPYRYLVPIKTAADMYLWTS 241

Query: 265 KHAQNHGFKIVSHSHTPNQLV 285
           +  +     +      P++  
Sbjct: 242 RIIERDPLIVYRRKVKPSRGR 262


>gi|328868425|gb|EGG16803.1| UPF0551 family protein [Dictyostelium fasciculatum]
          Length = 441

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 16/268 (5%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFL--YYFHTELMRVRDTARNPITRDM 75
            +D  +V   L   DY+ ++  +L        ++ L    F+ E      T  +P  R M
Sbjct: 164 KQDVRYVTDRLNKTDYESFICSILLSEEG-PKMTSLATRTFNVETA----TDPSPEKRQM 218

Query: 76  ---RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              +L +WKD   S   G + +   P    L   +++  L   +F+ ++     D     
Sbjct: 219 SKNKLAFWKDAINSIYNGRVYD--QPLIRVLAQQIKERGLSKTWFIKLLNRRDKDLDAVQ 276

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
             D ++ E Y+  I++ L+ L    +  +  S       + G A  +  LI   P H   
Sbjct: 277 PKDLEELEAYSDDINTSLLMLTLESMGVKGNSDVEHAASHLGKAMGLVTLIRGTPYHIRT 336

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNS--DRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            +LY P  I    G+  E    G ++  D++  AI   A     +L KAR     +  +V
Sbjct: 337 RKLYIPTSITNKYGIVAELLFQGSDAQQDKMKEAIFEMASRAKAHLDKARTF--DVPSNV 394

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHS 278
             AF+   I E+ L++ +   F I    
Sbjct: 395 RQAFLQSEICENYLENLRQVDFDIYQRP 422


>gi|296158649|ref|ZP_06841479.1| squalene synthase HpnC [Burkholderia sp. Ch1-1]
 gi|295891217|gb|EFG71005.1| squalene synthase HpnC [Burkholderia sp. Ch1-1]
          Length = 288

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 83/268 (30%), Gaps = 6/268 (2%)

Query: 33  YDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKG 90
           Y+ + +A +L P   R  +  +Y        + D    +   R  RL  ++   ++    
Sbjct: 6   YENFPVASVLLPKALRAPVGIIYQVVRTAGDIADEGDWSAAERHARLADFRAGLDAVAAR 65

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
             A        +L  +V QY LP   F D++ A   D       D      Y    ++ L
Sbjct: 66  RAAPVHPHLFGKLAGVVAQYKLPLAPFYDLLHACAQDIDTSRYADRAALLDYCRHSANPL 125

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
            HL   ++ +     +L        A  +      +   + + +LY PL  L    +   
Sbjct: 126 GHLMLHLIGAATPE-NLADADAICTASQLISFWLDVSADWKKDRLYLPLADLRRFNVSEA 184

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESV--LKHAQ 268
              +G         +        + L +       I   +    +  +I   +  L+  +
Sbjct: 185 HIANGVADQDWRALMAHEVSFVREMLVRGAPLALRISGRL-GIELCGAIHGGLRFLERIE 243

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             G+ +       N          +++ 
Sbjct: 244 KAGYDVFRERPELNTFDWCVVAARTAVM 271


>gi|71002949|ref|XP_756155.1| hypothetical protein UM00008.1 [Ustilago maydis 521]
 gi|46095569|gb|EAK80802.1| hypothetical protein UM00008.1 [Ustilago maydis 521]
          Length = 388

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/312 (21%), Positives = 109/312 (34%), Gaps = 31/312 (9%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           E         ++L  L   D+  YLA    P   +   + +  F+ E+  ++DT  N + 
Sbjct: 77  ELSPLQSPHKYLLEELVKRDHPSYLAHHFYPKHLQTHFAAIRTFNVEIAGLKDTVSNELL 136

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQY--------DLPNQYFLDMIEAH 124
             MR+ WW+D  + + +   A+   P  + L    +           L   +FL +I+  
Sbjct: 137 GRMRMGWWRDAVQGAYQNRPAK--HPVVLALRDAFQDPAVRSNAGGGLMLDHFLRIIDVR 194

Query: 125 FFDSYNDS-IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
             D  +D      +  E YA   SSRL +L+  +L      A   +  + G    +   I
Sbjct: 195 EADLSDDFQPPTLESLESYAESTSSRLHYLSLNLLGVRS-DAIDELFSHLGKVSGLSLAI 253

Query: 184 CQLPIHYHRGQ------------LYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAE 230
             +P H H               L  P + L    +  E     G  +     A+   A 
Sbjct: 254 SSIPYHTHPPPHMRNSTTKGARKLVLPREFLHLHKVVEEDVFRNGPEAHGFRDAVFALAT 313

Query: 231 LGLKYLFKAREEM-----RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ-L 284
               YL  AR+ +       +   V PA + V    S L+  +   F     S    +  
Sbjct: 314 RANDYLITARKIINDEFSGKLPMAVIPALVGVVPARSYLERLEKADFNPYDASLQSGKHW 373

Query: 285 VRPWYMLSSSIK 296
             PW M  +S K
Sbjct: 374 RLPWDMWRTSRK 385


>gi|289622020|emb|CBI51198.1| putative geranylgeranyl-diphosphate geranylgeranyltransferase
           [Sordaria macrospora]
          Length = 602

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 93/322 (28%), Gaps = 44/322 (13%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +       E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 269 RLVNTTKYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESST----------------KGLIAESISPFSVELLSIV 107
            D A++ +             +                      I E+  PF+ + L ++
Sbjct: 327 VDDAKSRLEVLSWTAKLNHFLDQHYGDSDATEDPKQKAERIDAYIKEAFPPFAYQALHLL 386

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSI------------FDCKQFEHYAFRISSRLIHLAT 155
             + LP +   ++I+    DS                    K  + YA R++  +  L  
Sbjct: 387 PTHILPPKPLYELIKGFEMDSQFTFHGSSDSTNLKFPIAHDKDLKTYAIRVAGTVGELCI 446

Query: 156 MILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
            ++                       GIA     +   + +    G++Y P   L   GL
Sbjct: 447 ALIIHHCLPDMSDSQKRRLESAACRMGIALQYVNIARDILVDAQIGRVYLPTSWLKEEGL 506

Query: 208 DRESFLSGQNSDRISL-AIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLK 265
             ++ L       +     +   +   +   +AR EM+ I  +     I        + +
Sbjct: 507 THKAVLDNPEGPEVIEKMRRRLLDNAFELYREARPEMQQIPSEARGPMIGAVENYMEIGR 566

Query: 266 HAQNHG-FKIV---SHSHTPNQ 283
             +     ++        T  +
Sbjct: 567 VLREKKVGQVFVRKEGRATVPK 588


>gi|242777645|ref|XP_002479076.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
 gi|218722695|gb|EED22113.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
          Length = 393

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 103/352 (29%), Gaps = 73/352 (20%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                +    +++ D   Y+     PP  +     L   +  L  + DT  +     MRL
Sbjct: 45  ESARRYCTNLVQNYDRPSYILSTFIPPQAQTLYLALRALNISLSMIPDTTSSHTIGLMRL 104

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDSY 129
           Q+W+D    +  G       P ++ L + +         +  L   +FL MI A      
Sbjct: 105 QFWRDTITRTLSGSP--PKEPVAILLANAIEDLSFRTNGRARLSKGWFLRMINAREQSLS 162

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP-- 187
           N    D    E YA    S L++L    +          +  + G A  I  ++  LP  
Sbjct: 163 NTPFADLSALESYAENTYSTLLYLTLSSVPLTSI-TVDHIASHIGKATGISAVLRGLPLV 221

Query: 188 ---------------------IHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAI 225
                                    +G +  PLDI+   G+  E     G  +  +  A+
Sbjct: 222 AFPAPAKHHTNQSSLISSTSGSEARQGAITLPLDIMAQSGVIEEEVFRKGAEAPGLKDAV 281

Query: 226 KIFAELGLKYLFKAREEMRYILP------------------------------------- 248
              A     +L  AR+ ++ +                                       
Sbjct: 282 FTVATRASDHLITARQMLKNLRAGQGVGHEFEHEGEEGHQYTNSTDDQTLSPYEKQLNEV 341

Query: 249 -DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              F   +P   T+  L   Q+  F I +     +    PW    +   K F
Sbjct: 342 ERGFGVLMPAVSTQLWLDRLQSFDFDIFNPKLLRSDWRLPWKAYLAHRSKSF 393


>gi|118397747|ref|XP_001031205.1| hypothetical protein TTHERM_00925890 [Tetrahymena thermophila]
 gi|89285529|gb|EAR83542.1| hypothetical protein TTHERM_00925890 [Tetrahymena thermophila
           SB210]
          Length = 410

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 113/289 (39%), Gaps = 8/289 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +V   +R  D++ Y+     P   R +   L Y++ ELMR+ +  +       +
Sbjct: 119 LKNAEKYVEDQIRKFDWNTYVISKYYPSAVRTAFFSLNYYNIELMRIPEMTKETNLIMGK 178

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L +W++      +    +   P SV L    ++  +       +I A  +++ +  +   
Sbjct: 179 LDFWQESINQIFQDQPMKE--PVSVCLHDACKKNPISKNLMTKLINARRYEADHPRLNSI 236

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
            +  + A +I S +I+L   +L  +     A  +     G    I   I ++P +  + +
Sbjct: 237 SELAYLAEQIRSNMIYLNLQLLRIDYKDNLAVHQAASSVGRCLGIIDYIRRIPYNLRKYR 296

Query: 195 LYFPLDILGAVGLDRESF---LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           LY P DI     +   +    + G+  D++   +   A    K L ++++  + + P  F
Sbjct: 297 LYMPEDINRKYNVSVRNLWDRVEGKPKDQLFDVVLEVASYAKKSLDESKQYQKDLPPQAF 356

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTP-NQLVRPWYMLSSSIKKRF 299
            AF+     E  L   +   F +   S    + +  P  +  ++  K+F
Sbjct: 357 RAFLHAVEAEQYLIDLEKANFNVFDRSLNANSYIQLPLQVFQAAKNKQF 405


>gi|330918830|ref|XP_003298358.1| hypothetical protein PTT_09072 [Pyrenophora teres f. teres 0-1]
 gi|330929983|ref|XP_003302842.1| hypothetical protein PTT_14821 [Pyrenophora teres f. teres 0-1]
 gi|330929990|ref|XP_003302845.1| hypothetical protein PTT_14824 [Pyrenophora teres f. teres 0-1]
 gi|311321520|gb|EFQ89061.1| hypothetical protein PTT_14824 [Pyrenophora teres f. teres 0-1]
 gi|311321524|gb|EFQ89064.1| hypothetical protein PTT_14821 [Pyrenophora teres f. teres 0-1]
 gi|311328455|gb|EFQ93548.1| hypothetical protein PTT_09072 [Pyrenophora teres f. teres 0-1]
          Length = 332

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 94/321 (29%), Gaps = 66/321 (20%)

Query: 41  LSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFS 100
             P   R +   +  F+ ++ RV DT   P    MR+Q+W+D    +  G       P +
Sbjct: 14  FIPQSSRDAYLAIRAFNVDVARVADTTSTPTIGMMRMQFWRDTVTKALAGTP--PKEPVA 71

Query: 101 VELLSIVRQYDL--------PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
           + L     Q              +F  +I        N         E YA    S +++
Sbjct: 72  ILLAQAADQLHERSRGKARLSKNWFHRIINTREQHLGNPPYPTLGALESYAENTYSTMLY 131

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-------------------HRG 193
           L    L     +    +  + G A  I  ++  +P+                      +G
Sbjct: 132 LTLSALPQASLTT-DHIASHIGKAMGITAVLRGIPLVAFPPQQPLGTSNSMTGQSGPTQG 190

Query: 194 QLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD--- 249
            +  PLD++    +  E     G ++  +  AI   A     +L  ARE +  +  +   
Sbjct: 191 AVLLPLDVMAEANVREEDVFRQGASAPGLRDAIFTVATRANDHLITAREMLSKLRSEGTL 250

Query: 250 --------------------------------VFPAFIPVSITESVLKHAQNHGFKIVSH 277
                                            F  F+P   T+S L   Q   F +   
Sbjct: 251 GHDFEHQHEEEHVYSAQQLNTGQETQLAEVEQAFGVFMPSIATQSWLDRLQKVDFDVFDQ 310

Query: 278 SHTPNQLVRPWYMLSSSIKKR 298
                    P     +  ++R
Sbjct: 311 RLRTVDWKLPVKAYWAYSRRR 331


>gi|82659763|gb|ABB88949.1| CrtB [Algoriphagus sp. KK10202C]
          Length = 280

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 29/289 (10%), Positives = 83/289 (28%), Gaps = 26/289 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           +++F + SL   + + +       L        Y   +  +Y F      + DT      
Sbjct: 4   KELFDQTSLDCGKLITQRYSTSFTLGIQTLEKKYHAPIYAIYGFVRYADEIVDTFHEHDK 63

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +  ++ ++            S++P       +V +Y++         ++   D    +
Sbjct: 64  AKLLAEFRRET---YVAIESGLSLNPVLHGFQLMVNKYEIGLDLIESFFQSMAMDLDFST 120

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
             D  +++ Y +  +  +  +   +      +   R+ +     G A      +  +   
Sbjct: 121 YSD-SRYQEYIYGSAEVVGLMCLKVFVEGDDAMYQRLKRPAQMLGSAFQKVNFLRDIKSD 179

Query: 190 Y-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +  RG++YFP           +    G   + I            K   +A   +  +  
Sbjct: 180 FEERGRVYFPGVSFELF----DKLAKGVIEEDIQ-----------KDFDEALIGIAQLPE 224

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSI 295
                  +     + +    ++     I           +   ++ +  
Sbjct: 225 GAKLGVKVAYLYYQKLFDKIKSLSAAKITHERIRIPNSQKFSLLIGTYF 273


>gi|284051802|ref|ZP_06382012.1| Squalene/phytoene synthase [Arthrospira platensis str. Paraca]
          Length = 170

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 4/154 (2%)

Query: 6   LTKNTR-KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           L+K+ R +     S       +         YL   L P   R ++  +Y +      + 
Sbjct: 15  LSKSPRMRTPATRSDSYELCRQITAQYAKTFYLGTQLMPLAKRQAIWAIYVWCRRTDELV 74

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D      T    L  W++  ES         I P  V L+  + ++ L  Q F DMI   
Sbjct: 75  DGPMASSTTLETLDHWEEQLESIFA---GHPIDPVDVALVDTLGRFPLDIQPFRDMIAGQ 131

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
             D   +      +   Y +R++  +  ++  ++
Sbjct: 132 RMDLSRNRYNTFDELNLYCYRVAGTVGLMSLAVM 165


>gi|67527048|gb|AAY68317.1| putative phytoene synthase [uncultured marine bacterium 66A03]
          Length = 298

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 17/268 (6%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L+      Y A          + + LY +   L    D          RL+      ++ 
Sbjct: 7   LQKNGKSFYWASHFLGREMSENAAKLYSYCRILDDFAD--SEIEYGPDRLRNIYQNLKNK 64

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
            K        P   E+L      +LP +   D+IE    D  +  I +  +   Y++ ++
Sbjct: 65  KKY-----SDPLLDEILMFFEDMNLPFRALKDLIEGLLQDQNDVLIKNEAELIQYSYHVA 119

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
             +  +   IL      A    +   GIA  +  +   +    + G+ Y P D +    +
Sbjct: 120 GSVGWMMCPILKCRNKKAFAFAVD-LGIAMQLTNIARDVREDAYMGRRYLPSDWVN--DM 176

Query: 208 DRESFLSGQNSDR------ISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-IPVSIT 260
                L             +  AI     L  +Y     + + ++      A  +   + 
Sbjct: 177 SPTDILEASKKPNSKNAQLVKKAIIKLLCLADQYYQSGVKGLVFLPWKAHLAIGVAGCVY 236

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPW 288
           + +                  +   +  
Sbjct: 237 QKIGTQLIAKKVNWYDGRTVTSSFAKVL 264


>gi|224008386|ref|XP_002293152.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971278|gb|EED89613.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 328

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 92/329 (27%), Gaps = 72/329 (21%)

Query: 42  SPPLYRISLSFLYYFHTELMRVRDT---------------------ARNPITRDMRLQWW 80
            P   R +   L  F+ E+  ++D+                       + +   +R+QWW
Sbjct: 1   MPSSAREAFFALRAFNVEIASIKDSSMLMGGRSRGRRDTDGEGEGMGDSSLASRLRMQWW 60

Query: 81  KDIFESSTKGLIAESI---------------------SPFSVELLSIVRQYDLPNQYFLD 119
           +D        +                          +P    L   +  + L +++   
Sbjct: 61  RDGIAEVYDDMDTTDDLQQKQSSQDPILRSLTSSRKLNPTLRSLTQAIHTHQLTHRFLRR 120

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFI 179
           M+EA   D         +    Y     S +++L+   +      + L      G+   +
Sbjct: 121 MMEAREKDLEVMQYERYRDVAQYGEDTVSSVLYLSLECVGVRDDQSDLVASD-IGVGLGL 179

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNS----------------DRISL 223
              +        +G+   P D+     +  ++  S  N+                + +  
Sbjct: 180 ITSLRSTAFRATQGECSVPFDLATKHSVTMDTIWSAWNASNNDIVTENEESKSAQEALRD 239

Query: 224 AIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH---- 279
             +  A +   +L +ARE    +  +  P  +P       L   +   F ++  S     
Sbjct: 240 TTRELAAMAAFHLHRARENQGTVPKEGRPCLLPAVCGLQYLNALEACNFDVLHPSLVGSS 299

Query: 280 ---------TPNQLVRPWYMLSSSIKKRF 299
                       +L     +  + +   F
Sbjct: 300 EGDGDVGVDRSRRLNLMLLLGRAWLTGTF 328


>gi|145507186|ref|XP_001439548.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406743|emb|CAK72151.1| unnamed protein product [Paramecium tetraurelia]
          Length = 314

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 104/303 (34%), Gaps = 8/303 (2%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           V KF T+  +K          ++   ++  D+  +      P   R     +  FH EL 
Sbjct: 7   VFKFCTE-PQKSIYKLENAQKYISDLVQKTDWISFAISKHIPKQVRQDYLNICQFHNELA 65

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
           R+ +T++       +LQ+W D  +            P S+ L +  +   LP   F  MI
Sbjct: 66  RIEETSKERSLGVGKLQYWSDQIDQIFLDNPQ--RDPLSICLHNSCKNNPLPKYLFQKMI 123

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYA-GIAQFIG 180
                        +       A         L   ++  +  +  L+ +      A  I 
Sbjct: 124 NYRKQQVERGEFANLVDMATSAEANRGSQFLLFLRLMRMDIENQDLKQLTEFSAQAVGIT 183

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDR---ESFLSGQNSDRISLAIKIFAELGLKYLF 237
             + ++P      +L  P DI     ++       + G+  + +   +   A      + 
Sbjct: 184 DYLRRVPFTLQNYKLSLPEDIKFKHNINVRSLWDRIRGEPKEELYDVVLEVAAFARSQMI 243

Query: 238 KAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTP-NQLVRPWYMLSSSIK 296
           K+      I P  F AF+ ++ TE  L+  + + FKI   +    + +  P  +  +  K
Sbjct: 244 KSTSFQNKIPPQSFRAFLHLTPTEQYLEELEYYNFKIFEKAINQNSYVQLPITLFKNCRK 303

Query: 297 KRF 299
            +F
Sbjct: 304 MKF 306


>gi|121713878|ref|XP_001274550.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
 gi|119402703|gb|EAW13124.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
          Length = 374

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 97/350 (27%), Gaps = 70/350 (20%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +    L   D   Y      P   +     L   +  L  + DT  +     MR
Sbjct: 28  VQAARKYCTDLLLKYDRPSYTLSTFIPQHSQPFYLALRALNVTLSMIPDTTSSHTIGLMR 87

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDS 128
           LQ+W+D       G       P ++ L S +            +   +   MI A     
Sbjct: 88  LQFWRDAVTKILAGSP--PKEPIAILLASTIADLNERTQGHARISKAWLNKMINARERTL 145

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            ND        E YA    S L++L    L     +A   V  + G A  I  ++  LP+
Sbjct: 146 TNDPYPTIAALESYAENTYSTLLYLTLSSLPMTSVTA-DHVASHVGKAAGIAAVLRGLPL 204

Query: 189 HY--------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKI 227
                                  +G +  PLD++   G+  E     G  +  +  A+  
Sbjct: 205 IAFPPPPAQSPTHAGSALTGGMRQGAVMLPLDVMAQAGVKEEDVFRMGAEAPGLRDAVFT 264

Query: 228 FAELGLKYLFKAREEMRYILP--------------------------------------D 249
            A     +L  A++ +  +                                         
Sbjct: 265 VATRASDHLITAQQMLSNLRAGQDVGHDFEHEGEEGHEYPAEHDVAAGQRGESPLEEVNR 324

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            F  F+P   T   L   ++  F I       +    PW    +  +K F
Sbjct: 325 AFGVFMPAVATRLWLDKLESVDFDIFRPELLRSDWKLPWRAYLAFKRKTF 374


>gi|297190554|ref|ZP_06907952.1| phytoene synthase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197717868|gb|EDY61776.1| phytoene synthase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 306

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 77/287 (26%), Gaps = 20/287 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR------------ 76
           +  D +  +A    P  +R  L  +Y +   +  + D    P   D R            
Sbjct: 19  KAADENFPVAPFFLPRAWRDDLMAVYGYARLVDDIGDGDLAPGGADARHLGVGPEQAGDR 78

Query: 77  ---LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  ++                P    L   V +  L  + FL +I A+  D      
Sbjct: 79  LALLDAFETDLRRVFDLSGDAPRHPLLRALRPAVARRSLTPEPFLGLIAANRQDQLVRRY 138

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                   Y    ++ +  L   I  +      LR          I + +  +     R 
Sbjct: 139 ETYGDLLAYCELSANPVGRLVLGITGTASPE-RLRRSDAVCTGLQIVEHLQDVAEDLARD 197

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + +    +      +      +   I   A+     L +    +  +   +   
Sbjct: 198 RIYLPAEDMKRFHITEADLAAPTAGASVRALIAYEAQRARALLDEGIGLVGSVDGRLRLL 257

Query: 254 FI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP---WYMLSSSIK 296
               V    + L      G  ++       +       W +L  + +
Sbjct: 258 LAGFVGGGRAALAAIAAAGHDVLPEPPRATRPRLLREVWTVLRRARR 304


>gi|296081296|emb|CBI17740.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 87/260 (33%), Gaps = 29/260 (11%)

Query: 48  ISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIV 107
            +   +  F+ E  R  D A +P    MRL WW++  +        E   P +  L S+V
Sbjct: 3   KAAFAIRAFNVETARAMDIASDPRVGLMRLLWWQEAIDKIFANKTIE--HPTAQALASVV 60

Query: 108 RQYDLPNQYFLDMIEAHFFDSYN---DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS 164
            ++ +   +    +EA   D+     D     ++ E YA    S L++           +
Sbjct: 61  SEHKISKGWMKRSVEARINDARREVTDMPETIEELERYAEDTVSTLLYTTLQAGGIRSTA 120

Query: 165 ASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
           A      + G A  +  L+  LP H +R Q+                     + + +   
Sbjct: 121 A-DHAASHIGKASGLLLLLRSLPYHANRNQI------------------RMDSPEGLCDV 161

Query: 225 IKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHS-----H 279
           +   A +   +L KAR+    +  +  P  +P    + +L       F +          
Sbjct: 162 VFDMASVANAHLEKARQLAGTVPAEALPVLLPAVPAQVILDSLSRVQFNVFDPRMARGIL 221

Query: 280 TPNQLVRPWYMLSSSIKKRF 299
               L     +   S + ++
Sbjct: 222 GIPPLWFQLKLKWHSWRGKY 241


>gi|295132745|ref|YP_003583421.1| phytoene synthase [Zunongwangia profunda SM-A87]
 gi|294980760|gb|ADF51225.1| phytoene synthase [Zunongwangia profunda SM-A87]
          Length = 279

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 89/292 (30%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFV-LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + IF   S                 A  +  P  R  +  +Y F      + D+  +   
Sbjct: 2   KSIFDVVSRTCSKEVTNAYSTSFSSATKMLAPSIRQDIYNIYGFVRFADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +   +  D++++    +   S++P        V +Y++  + ++  +++   D +   
Sbjct: 62  EKLFNDFETDLYKALADKI---SLNPILNAFQETVHKYNIDKELYVAFMKSMRLDLHKSD 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
               ++++ Y +  +  +  +   +          ++ +     G A      +  L   
Sbjct: 119 YLSIEEYKEYIYGSADVVGLMCLKVFVKGDQKKYDQLKESAMSLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L    LD ES              K       +   K    + ++  
Sbjct: 179 FEDLNRSYFPNTNLDQ--LDEES-------------KKRIIAEIEEDFRKGLNGIIHLPV 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  +      + +L   +     +I       +   +   +  S I  R
Sbjct: 224 EAKFGVYTAYIYYKKLLYKLKQTPSLEIKKKRIRVSDYQKAGLLAKSYISCR 275


>gi|311895179|dbj|BAJ27587.1| putative phytoene synthase [Kitasatospora setae KM-6054]
          Length = 319

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 37/304 (12%)

Query: 30  DIDYDRY-LACLLSPPLYRISLSFLYYFHTELM-----------------RVRDTARNPI 71
             D + + +A    P  +R  L  +Y F   +                   V   A +  
Sbjct: 18  KADLENFPVAPGFLPAAWRGDLMAVYGFARLVDDAGDGDLADPAAVARLLDVPGDAADDG 77

Query: 72  TRDMRLQWWKDIFESSTKG---------------LIAESISPFSVELLSIVRQYDLPNQY 116
            R   L   +   + +                     E   P    L+ ++ ++ +  + 
Sbjct: 78  FRLALLDGLERDLDRAFATALGDDPAPHGTVLGADPGEPRHPLLRGLVPLIERHAVTPEP 137

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIA 176
           F  +I+A+  D             HY    +  +  L   +                  A
Sbjct: 138 FRRLIQANRVDQTTSRYATYADLRHYCTLSADPVGRLVLALAGRATPERIEL-SDAICTA 196

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             I + +  +     RG++Y P + L A G+      +   +  +   +   A      L
Sbjct: 197 LQIVEHLQDVAEDLARGRIYLPQEDLAAFGVTERDLAADTATRGVRQLVAWEASRARTLL 256

Query: 237 FKAREEMRYILPDVFPAFIPVSITESV--LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +    +  +   +    +          L   +   F +++H   P++        +  
Sbjct: 257 DRGAPLVGTVHGRLR-LLLAGFTAGGYAALDAIEAVRFDVLAHRAKPDKRRLAGRAAALF 315

Query: 295 IKKR 298
           +K R
Sbjct: 316 VKGR 319


>gi|163793149|ref|ZP_02187125.1| 2'-deoxycytidine 5'-triphosphate deaminase [alpha proteobacterium
           BAL199]
 gi|159181795|gb|EDP66307.1| 2'-deoxycytidine 5'-triphosphate deaminase [alpha proteobacterium
           BAL199]
          Length = 309

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 96/276 (34%), Gaps = 9/276 (3%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
                   R+ D +RYLACL +P   R +L  L   + E+ +  +    P    +RLQWW
Sbjct: 35  LTACAAIAREHDRERYLACLYAPDSRRDALFALLAANHEIAKTAEVVSEPAIGQIRLQWW 94

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           ++  E    G         ++ L   V +  L  Q    +IE    D   D   D    +
Sbjct: 95  REALEGVEAGRP--RAHEVAIPLAEAVERGGLRPQRLYAIIEVREADLDEDPPADLDALD 152

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            YA   +  L      IL ++  +ASL      G A  +  L+   P     G+   P  
Sbjct: 153 RYAAGTAGELHAAMAEILSADPVAASLT-----GTAWGLLGLMRAAPALIAIGRRPLPDT 207

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSIT 260
           +L   GL  +       S R+  A++   E    +L +A + + +  P   P  +     
Sbjct: 208 LLQECGLSHQKIRDFGGSIRLGDAVRPVVERARLHLVQAHDSVNFHAPAFRPLRLLADRA 267

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                  +   F+                +   +++
Sbjct: 268 SDHASLLERADFEPFDLPPAARPT--GGLIWRHAVR 301


>gi|221068428|ref|ZP_03544533.1| squalene synthase HpnC [Comamonas testosteroni KF-1]
 gi|220713451|gb|EED68819.1| squalene synthase HpnC [Comamonas testosteroni KF-1]
          Length = 293

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 74/279 (26%), Gaps = 14/279 (5%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDIFES--- 86
              +  +A  L PP  R  ++ +Y+F      + D        R  +LQ +    +    
Sbjct: 16  HYENFPVASWLCPPRLRAPIAAIYHFARTADDLADEGDHCAEKRRAQLQQYAADLQQLGS 75

Query: 87  --STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND----SIFDCKQFE 140
                 L+  S       L   V+ + LP     D++ A   D           D  Q  
Sbjct: 76  AGEAAMLMRTSWPHIFGPLAVQVQAHGLPKPLLADLLSAFEQDVRMTAAQAHYTDMAQLL 135

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y  R ++ +  L   +       A L        A  +      L     R + Y P  
Sbjct: 136 DYCRRSANPIGRLLLHLYGVVNAKA-LIQSDAICTALQLINFWQDLSQDLPRQRHYLPDA 194

Query: 201 ILGAVGLDRESF--LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS 258
            L   GL R +    +   +  +   +          +      +  +          V 
Sbjct: 195 DLTRHGLVRRAIKPEATALTPELQSLLGELNRQARSLMNHGAPLVHQLPGRTGWELRLVV 254

Query: 259 ITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                +L        + +       +L     +  +   
Sbjct: 255 QGGLRMLDRLDAMQGRNLYQRIKLGKLDMAVMLWQALRM 293


>gi|70607463|ref|YP_256333.1| phytoene synthase [Sulfolobus acidocaldarius DSM 639]
 gi|68568111|gb|AAY81040.1| phytoene synthase [Sulfolobus acidocaldarius DSM 639]
          Length = 275

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 76/260 (29%), Gaps = 13/260 (5%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
             +      Y + +  PP  R  ++ LY F      + D+           ++++   + 
Sbjct: 7   IFKRASVTYYNSSVFFPPQVRRDVTKLYAFVRVFDDLVDS-----IPQKAKEFYELRSKY 61

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
             +    +S        + ++R+ +   ++    ++A   D      +   +   Y +  
Sbjct: 62  YEQLDGKDSNDLVLKNFVDLMRRKNFDKEWVDAFLDAMESDLKKSVYYTIDELLEYIYGS 121

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +  +  +   I   +    S    +  G A      I  +      G+ Y P   +    
Sbjct: 122 AEVVGVMMAKI--LDLPEESYYYARMLGRAMQYINFIRDVEEDMALGRQYLPFQEMMEFK 179

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-IPVSITESVLK 265
                     +S R +  I+       +Y   A +   YI      A      + +   K
Sbjct: 180 TSLLD-----SSPRFNEFIRFQISRYFEYQKTAEKGYSYIPFRYLIAIKTAADMYKWTAK 234

Query: 266 HAQNHGFKIVSHSHTPNQLV 285
              N+   I      P +  
Sbjct: 235 KIWNNPQIIKQRKIKPKKRR 254


>gi|304391785|ref|ZP_07373727.1| squalene/phytoene synthase [Ahrensia sp. R2A130]
 gi|303296014|gb|EFL90372.1| squalene/phytoene synthase [Ahrensia sp. R2A130]
          Length = 276

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 4/265 (1%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L+  +   Y A LL P   R +   L+ FH EL  +   +  P+   +R QWW+++ E  
Sbjct: 14  LKQREPLFYFADLLLPEPLRGTAQVLHAFHGELNALAAKSTEPMVGQIRFQWWQEVIEGG 73

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                     P + +LL  V+      Q     IEAH FD Y+D + D   FE +     
Sbjct: 74  RDNEAK--SHPLASQLLLGVQSGVFDPQMLTRKIEAHIFDLYHDPMPDFPAFEVWCGETR 131

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           S L     +  D     A      +AG+A     ++  LP+H   G+ + P ++L    L
Sbjct: 132 SVLFQQL-LATDRAVDGAYADACGHAGVALGYADVLSSLPLHRAAGRRFLPTELLQQHEL 190

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
               + S  +   +   I+  A LGL +L KA   +     D+ P F P+S   S L   
Sbjct: 191 PENDWFSAPDRLHV-DVIRAAALLGLSHLDKALTALAACPSDIRPLFSPLSPLRSTLDML 249

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLS 292
              G          +QL   W +  
Sbjct: 250 SKAGTDAFEKPWRLSQLRMQWQLFR 274


>gi|171680900|ref|XP_001905394.1| hypothetical protein [Podospora anserina S mat+]
 gi|170940408|emb|CAP65634.1| unnamed protein product [Podospora anserina S mat+]
          Length = 369

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 100/339 (29%), Gaps = 66/339 (19%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            ++   + L  L+  DY+ Y+     P     +   L   + EL R+ +T  NP    +R
Sbjct: 33  VTQSRDYCLNQLKHSDYETYMIRQFVPRSANDAYHALRTLNLELARLPETVSNPTIGRLR 92

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLP---------NQYFLDMIEAHFFD 127
           +Q+W+D  E    G       P ++ L S + Q               + L  ++     
Sbjct: 93  IQFWRDTIERVFAGSP--PREPIAILLHSAIAQLKSRAGDGSASSLKFWLLRFLKTRERH 150

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
             N         E Y+    + L+++    +          +  + G A  I   +  +P
Sbjct: 151 MENRPFVSLAALEDYSENTYATLMYMTLAFMPMRSVH-MDHLASHIGKACGIVATLRGIP 209

Query: 188 IHY-----------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFA 229
           +                       L  PLD++   GL  E     G N++ +  A+   A
Sbjct: 210 VLAAPSTPIQVPSGANLRSTRSPALLLPLDVMADAGLKEEDVFRMGPNAEGLQDAVFHVA 269

Query: 230 ELGLKYLFKAREEMRYIL---------------------------------PDVFPAFIP 256
                +L  ARE ++ +                                     F   + 
Sbjct: 270 TRANDHLITAREMLKNLRLGKGPDHDYEHEGEAEHVYSSAAHNVETAGSDIKRGFGVLLE 329

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
                  LK  +N  F         +    PW +  +  
Sbjct: 330 AVAAGDYLKRLENANFDPF--KVKKS-WKLPWSLWQALR 365


>gi|296136119|ref|YP_003643361.1| Squalene/phytoene synthase [Thiomonas intermedia K12]
 gi|295796241|gb|ADG31031.1| Squalene/phytoene synthase [Thiomonas intermedia K12]
          Length = 280

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 98/266 (36%), Gaps = 5/266 (1%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A    PP  R +L+ L   H ++  +  T  +P     +L WW             
Sbjct: 18  STYYALQRCPPARRAALTLLLDVHVQVRSIVTTVSDPAVAQAKLAWWH---AQMLALDQD 74

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
           ++  P    L    R++DL  Q  L +IE+   D   +   D     HY    S + +  
Sbjct: 75  QAEHPSLRALGGCFREHDLRPQALLGLIESVDTDLRQNRWMDRAALVHYCRAGSGQTLRN 134

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
           A  +L      A L   +  G+A  +   I  L     +G++Y PLD L   G+      
Sbjct: 135 AAALLGLTARPA-LDAAEELGVALRLTSHIRHLGRDVAQGRVYLPLDALQRHGVKAVDLQ 193

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGF 272
               S  I   ++    L    L  AR  +           + +  ++E++L   +   F
Sbjct: 194 QRVVSPPIRALLQEQTTLARAALSTARSALAPYPAAQTAPLLALGDMSEALLSEIERADF 253

Query: 273 KIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++    +   L + W   +S++++R
Sbjct: 254 AVLHQRISLTPLRKLWISRTSNLRRR 279


>gi|321265143|ref|XP_003197288.1| hypothetical protein CGB_M1080C [Cryptococcus gattii WM276]
 gi|317463767|gb|ADV25501.1| Hypothetical protein CGB_M1080C [Cryptococcus gattii WM276]
          Length = 339

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 85/295 (28%), Gaps = 14/295 (4%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
                +    ++ +D + +L     P   +        F+ EL  +  T   P    +R 
Sbjct: 44  QAPLEYCSSLVQKMDPEAWLCSYFWPKREKAWWLAWRAFNLELHSISTTVSQPALASIRF 103

Query: 78  QWWKDIFESSTKGLIAE---SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY----N 130
           Q+W+D  +               P +V L ++ R   +   Y   +I+            
Sbjct: 104 QFWRDTLKGIFASNSQNQNIPQHPVAVLLANMKRHRPVQKYYLSQLIDVRAKALSLPPAA 163

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
            S+                      +       +     + +      +  L+  LPI  
Sbjct: 164 ASLESHLSIHSPLSTSLLLGPLPILLPPTHASSAHISHTLSHVSTLLTVVSLLRNLPILI 223

Query: 191 HR-GQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRY--- 245
            +  Q+  P DI    G+  E     G  +     A       G+  L  AR +++    
Sbjct: 224 SQKRQISLPADICEKYGIIEEELFRKGAEAKGFRDACWEIGTRGMDELITARRDLKETGG 283

Query: 246 --ILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             +   V P F+     E+ LK  + + F +       +       +       +
Sbjct: 284 KVMPNSVMPIFLSAVPPENYLKRLEKYDFDVFHPELQKHDWRLAPKIWYKYQTGK 338


>gi|330427685|gb|AEC19019.1| putative phytoene synthase [Pusillimonas sp. T7-7]
          Length = 312

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 77/290 (26%), Gaps = 27/290 (9%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDIFESST 88
           D   +  +A LL P   R  +  +Y +      + D     P  R  +L  ++   +   
Sbjct: 22  DHYENFPVASLLLPRRLRAPVRNIYRYARSADDIADEGTALPGQRLEQLAQYRRALQHIA 81

Query: 89  ----KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                     +I      L   +RQ+ LP   F D++ A   D              Y  
Sbjct: 82  DGSLHLDQTGAIRQVFEPLEQTIRQHSLPMAPFFDLLSAFEQDVTTTRYACDAALFDYCR 141

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           R ++ +  L   +   +  + +L +         +      + + + + ++Y P D L  
Sbjct: 142 RSANPVGRLMLHL-YGKATADNLALSDAICTGLQLTNFWQDVAVDWQKDRIYLPQDKLKR 200

Query: 205 VGLDRESFLSGQN--------------------SDRISLAIKIFAELGLKYLFKAREEMR 244
             L  +                           +      +        + L       R
Sbjct: 201 HELGEDFIAEQTRQGLLADSKPARDSGTSRVLLNGGWQALMHGQVAQARELLLSGLPLTR 260

Query: 245 YILPDVFPAFIPVSITE-SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +          V      +L+      + I     T  +      +  +
Sbjct: 261 RLGGRTGLELKLVVHGGLRILERLDQLHYDIFFQRPTLAKSDWVLLLWRA 310


>gi|291455360|ref|ZP_06594750.1| squalene/phytoene synthase [Streptomyces albus J1074]
 gi|291358309|gb|EFE85211.1| squalene/phytoene synthase [Streptomyces albus J1074]
          Length = 271

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 65/242 (26%), Gaps = 16/242 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD---------------TARNPITR 73
           +    +  +A    P  +R  L  +Y +   +  + D                      R
Sbjct: 29  KAAAENFPVAPFFVPRAWRRGLMAVYGYARLVDDIGDGDLTPGGADARLLGVEGSAAEDR 88

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L   +                P    L  +VR + L  + F  +I+A+  D      
Sbjct: 89  LTLLDALEADLARVFATTGPGPAHPLVAALRPVVRAHGLTPEPFRALIQANRQDQLVTRY 148

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                   Y    ++ + HL   +  +       R          I + +  +     R 
Sbjct: 149 ETWDDLAAYCELSANPVGHLVLGLTGTLTPERVRR-SDAVCTGLQIVEHLQDVAEDLGRD 207

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + L    ++     +   S  +   +   A    + L +    +  +   +   
Sbjct: 208 RIYLPAEDLKRFRVEESDLAAPTASASLRALVAYEASRAGELLAEGGPLIASVHGRLRLL 267

Query: 254 FI 255
             
Sbjct: 268 LA 269


>gi|294816063|ref|ZP_06774706.1| Phytoene synthase [Streptomyces clavuligerus ATCC 27064]
 gi|326444405|ref|ZP_08219139.1| squalene/phytoene synthase [Streptomyces clavuligerus ATCC 27064]
 gi|294328662|gb|EFG10305.1| Phytoene synthase [Streptomyces clavuligerus ATCC 27064]
          Length = 313

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 83/287 (28%), Gaps = 23/287 (8%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL---------------Q 78
           +  +A    P  +R  L  LY +   +  + D    P   D RL                
Sbjct: 28  NFPVAPFFLPRAWRHDLMALYGYARLVDDIGDGDLAPGGGDARLLGVPPEAADDRLALLD 87

Query: 79  WWKDIFESSTKGLIAE---SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
             +                   P    L S VR   L  + FL +I A+  D        
Sbjct: 88  ALEADLRRVFDPAPGGVPGPRHPLLRALRSPVRDRSLTIEPFLGLIAANRQDQLVRRYAT 147

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            ++   Y    ++ +  L   +  +      LR       A  I + +  +     R ++
Sbjct: 148 YEELLAYCELSANPVGLLVLQVSGTLTPE-RLRRSNAVCTALQIVEHLQDVSEDLARDRI 206

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P + L    +      +   +  +   +   A+   + L +    +  +   +     
Sbjct: 207 YLPAEDLRRFHVSENDLAAPTGNASVRALVAYQADRAHRLLDEGVPLVGSVHGRLRLLLA 266

Query: 256 -PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP---WYMLSSSIKKR 298
             V    + L      G+ ++     P +         +L  + K+R
Sbjct: 267 GFVGGGRAALAAIAAAGYDVLPGPPRPARTRLLHDVGAVLRRARKER 313


>gi|197245079|dbj|BAG68956.1| phytoene synthase [Brassica napus]
          Length = 168

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 62/168 (36%), Gaps = 6/168 (3%)

Query: 114 NQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SASLR 168
            Q F DM+E    D       +      Y + ++  +  ++  ++  +        +   
Sbjct: 1   IQPFRDMVEGMRMDLRKSRYKNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYN 60

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                GIA  +  ++  +     RG++Y P D L   GL  E   +G+ +D+    +K+ 
Sbjct: 61  AALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQ 120

Query: 229 AELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIV 275
            +    +  +A + +  +      P +  + +   +L   + + +   
Sbjct: 121 LKRARMFFDEAEKGVTELDAASRWPVWASLLLYRRILDEIEANDYNNF 168


>gi|302541344|ref|ZP_07293686.1| squalene synthase HpnC [Streptomyces hygroscopicus ATCC 53653]
 gi|302458962|gb|EFL22055.1| squalene synthase HpnC [Streptomyces himastatinicus ATCC 53653]
          Length = 289

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 83/286 (29%), Gaps = 21/286 (7%)

Query: 30  DIDYDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR------------ 76
              ++ + +A    P  +R  L  +Y +   +  + D    P   D              
Sbjct: 4   KAAHENFPVAPFFVPRAWRADLMAVYGYARLVDDIGDGDLPPGGADAELLGLDRSLADDP 63

Query: 77  ---LQWWKDIFESSTKG-LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
              L  ++   +        A    P    L   VR+  L    F  +IEA+  D     
Sbjct: 64  LAMLDAFEADLDRVFDTASAAPPRHPLLRSLRPTVRRNGLTPGPFRGLIEANRQDQRVRR 123

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
               ++   Y    ++ +  L   I  +               A  I + +  +     R
Sbjct: 124 YATFQELLDYCELSANPVGRLVLGITGTVTPERVR-RSDAICTALQIIEHLQDVAEDLRR 182

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            ++Y P + +   G+      + +    +   +   AE     L +    +  +   +  
Sbjct: 183 DRVYLPAEDMKRFGVTEADLAAPKGGASVCALVAYEAERARDLLNEGTPLVGSVHGRLK- 241

Query: 253 AFIPVSITES--VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +   +      L+     G  ++     P +L     + ++  +
Sbjct: 242 VLLAGFVAGGRAALRAVAAAGHDVLPGPPRPTKLSLLREVGATLRR 287


>gi|319943622|ref|ZP_08017903.1| phytoene synthase [Lautropia mirabilis ATCC 51599]
 gi|319742855|gb|EFV95261.1| phytoene synthase [Lautropia mirabilis ATCC 51599]
          Length = 304

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 93/275 (33%), Gaps = 9/275 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQWWKDIFESST 88
           D   +  +   L P   R ++  +Y F      + D    P   R++ LQ      + + 
Sbjct: 31  DHAENFPVGSWLVPAQLRPAVLAIYRFARHADDLADEGDVPTAEREVALQALHAALDEAA 90

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +G    S  P    L++ V+++ L  ++F D+++A   D          Q + Y  R ++
Sbjct: 91  RGAP--SGVPVVDGLVASVQRHGLHWRHFHDLLDAFLQDLRVTRYDTEAQVQDYCRRSAN 148

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +  L   +      +A  +       A      +  + I   + ++Y P   L A G  
Sbjct: 149 PVGRLLLQLYGVGSDTALAQ-SDAICSALQRINFLQDIGIDAAKDRVYLPAATLAAAGSS 207

Query: 209 RESFLSGQNSDRISLAIKI----FAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESV 263
            E  L+   + R+  A +       +     L       + +   +      + +  + +
Sbjct: 208 AEMLLAEARAGRLGAASRQAVRLEWQSTQAQLLAGVALPQQLPWRLAAELRFIIAGGQRI 267

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           L    +  +  V+          P  +  +   +R
Sbjct: 268 LDRIAHADYDSVARRPALGWRDGPALLRLALFPRR 302


>gi|164422955|ref|XP_958512.2| hypothetical protein NCU09517 [Neurospora crassa OR74A]
 gi|157069887|gb|EAA29276.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 372

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 95/321 (29%), Gaps = 63/321 (19%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             DY+ +L     PP  R + + L   + EL R+ +T  NP    MR+ +W++   S   
Sbjct: 52  HGDYEAFLLRQFVPPSSRDAYNALRTLNLELARLPETVSNPTIARMRMSFWRETVNSVFA 111

Query: 90  GLIAESISPFSVELLSIVRQYDLP---------NQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           G       P S+ L   ++                + L +I        N         E
Sbjct: 112 GNP--PREPISILLHQAIQDLKARAGPNSASSLKFWLLRLINTREQHMENRPFVSLNSLE 169

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY---------- 190
            YA    + L+++    +          +  + G A  I   +  +P+            
Sbjct: 170 DYAENTYATLMYVTLASMPLRSVH-MDHLASHIGKACGIVATLRGIPVLAAPSQPIQGPA 228

Query: 191 ------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEM 243
                     L  PLD++  VG+  E     G N++ +  ++   A     +L  ARE +
Sbjct: 229 GSVGNTRHPALLLPLDVMAEVGVREEDVFRHGPNAEGLQDSVFKVATRANDHLITAREML 288

Query: 244 RYIL-------------------------------PDVFPAFIPVSITESVLKHAQNHGF 272
           + +                                   F   +        L+  +   F
Sbjct: 289 KNLKAGEEVGHDYEHEGEQEHIYSSGGVDATQADIKRGFGVLLEAVPAADYLERLEKADF 348

Query: 273 KIVSHSHTPNQLVRPWYMLSS 293
                  +      PW +  +
Sbjct: 349 DPFKVKAS---WKLPWRLWRA 366


>gi|239983542|ref|ZP_04706066.1| squalene/phytoene synthase [Streptomyces albus J1074]
          Length = 261

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 65/242 (26%), Gaps = 16/242 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD---------------TARNPITR 73
           +    +  +A    P  +R  L  +Y +   +  + D                      R
Sbjct: 19  KAAAENFPVAPFFVPRAWRRGLMAVYGYARLVDDIGDGDLTPGGADARLLGVEGSAAEDR 78

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L   +                P    L  +VR + L  + F  +I+A+  D      
Sbjct: 79  LTLLDALEADLARVFATTGPGPAHPLVAALRPVVRAHGLTPEPFRALIQANRQDQLVTRY 138

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
                   Y    ++ + HL   +  +       R          I + +  +     R 
Sbjct: 139 ETWDDLAAYCELSANPVGHLVLGLTGTLTPERVRR-SDAVCTGLQIVEHLQDVAEDLGRD 197

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++Y P + L    ++     +   S  +   +   A    + L +    +  +   +   
Sbjct: 198 RIYLPAEDLKRFRVEESDLAAPTASASLRALVAYEASRAGELLAEGGPLIASVHGRLRLL 257

Query: 254 FI 255
             
Sbjct: 258 LA 259


>gi|150025506|ref|YP_001296332.1| geranylgeranyl-diphosphategeranylgeranyltransfera se
           [Flavobacterium psychrophilum JIP02/86]
 gi|149772047|emb|CAL43523.1| Geranylgeranyl-diphosphategeranylgeranyltransferase [Flavobacterium
           psychrophilum JIP02/86]
          Length = 279

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 27/292 (9%), Positives = 79/292 (27%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S    + + +        A  +     R  +  +Y F      + D+  +   
Sbjct: 2   KSLFDTVSNDCSKIVTQSYSTSFSSAVKMLSSSIRQDIYNVYGFVRLADEIVDSFHDYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +   +     +         S++P        V ++ +        + +   D     
Sbjct: 62  EAL---FNTFEIDLKNALEQKISLNPILNAFQHTVHKHKISYDLIDAFMNSMKLDLAKKE 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                +++ Y +  +  +  +   +    + E Y +        G A      +  L   
Sbjct: 119 YKTKDEYDQYIYGSADVVGLMCLTVFVKGNVELYESLKNAAMRLGSAFQKVNFLRDLKAD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           +    + YFP   L  +    +                   +          E + ++  
Sbjct: 179 FEDLNRTYFPNTDLSQLNETSKQ---------------EIIKEIEADFKAGYEGITHLPI 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  +      + +L   +    + I +     +   +   + +  +K R
Sbjct: 224 EAKFGVYTAYIYYKKLLSKLKKTPSREIKNTRIRVSDYQKISLLANCYVKYR 275


>gi|312881850|ref|ZP_07741621.1| phytoene synthase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370496|gb|EFP97977.1| phytoene synthase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 307

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 78/279 (27%), Gaps = 23/279 (8%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           +   IF +D+    +         Y A       +      LY     L  + DT  +  
Sbjct: 10  QCSSIFLKDAK---QVTAQYGKTFYFASFFMGQRHTQRSYKLYQLCRFLDDIADTKGDSS 66

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
                +  +  + ++++                S    + LP+     +IE   FD    
Sbjct: 67  ---EEIDKFNTLIKANSHNNQV-----------SFCEDFSLPSFPLEHLIEGFLFDQNTP 112

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
            I D      Y ++++  +  +    LD+    A    I   GIA  +  +   +     
Sbjct: 113 LIEDVDGLIRYCYQVAGTVGVMMCHALDTVEEEALPHAID-LGIAMQMTNIARDVFEDAK 171

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
            G++Y P   LG            Q    I  A     EL  +Y       + Y+     
Sbjct: 172 MGRIYIPTQWLGEKTQHC--LYRNQPHIGIRHAQIKLLELAERYYKSGLAGLHYLPLRSR 229

Query: 252 PAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
            A +       ++ K   +                +   
Sbjct: 230 FAILIAAQCYRAIGKEVISTTR--PEQRAYVPIAKKMII 266


>gi|229581543|ref|YP_002839942.1| Squalene/phytoene synthase [Sulfolobus islandicus Y.N.15.51]
 gi|228012259|gb|ACP48020.1| Squalene/phytoene synthase [Sulfolobus islandicus Y.N.15.51]
          Length = 298

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 25/263 (9%), Positives = 73/263 (27%), Gaps = 12/263 (4%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
             +      Y + LL P   R  ++ LY F      + D+    +      +++      
Sbjct: 27  IFKKSSITYYNSTLLFPREIRRDVTKLYAFVRVFDDLVDSVPQKVK-----EFYSLRELY 81

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
             +     S        + ++R+     ++    + +   D      +   +   Y +  
Sbjct: 82  YKELDNGSSGDVVLSNFVEMMRRRGFKEEWVEAFLNSMESDLKKKVYYTIDETLGYMWGS 141

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +  +  +   IL+    +A     +  G A      I  +      G+ Y P++ +    
Sbjct: 142 AEVVGLMMMKILNLRDEAAYY--ARMLGRAMQYLNFIRDVREDMEMGRQYLPVNEMKEFK 199

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLK 265
           +        + ++     ++   +    +  +A      I    +        + +   +
Sbjct: 200 VSSLL----ECNEAFKEFMRFNLKRYFFFQKEAERGYHMIPSRYLIAVKTAGDMYKWTAR 255

Query: 266 HAQNHGFKIVSHSHTPNQLVRPW 288
                   +      P +     
Sbjct: 256 RIMADPCVVNRMKVKPKRRRVLA 278


>gi|258567126|ref|XP_002584307.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237905753|gb|EEP80154.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 342

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/343 (17%), Positives = 99/343 (28%), Gaps = 75/343 (21%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R  D   Y      P         L   +  L  + D+  NP    MRLQ+W+D    + 
Sbjct: 3   RKYDRPSYTLSTFIPRQTLDFYIALRALNVSLSLIPDSTSNPTIGLMRLQFWRDTITRTL 62

Query: 89  KGLIAESISPFSVELLSIVRQYD--------LPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
            G       P ++ L + + + D        +   + + +I A      N S       E
Sbjct: 63  AGTP--PKEPIAILLANALSELDARTKGKSRISKGWLMRLISAREQPLTNTSYTSITALE 120

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY---------- 190
            YA    S L++L    L          +  + G A  I  ++  LP+            
Sbjct: 121 QYAENTHSTLLYLTLSALPLTSL-TVDHLASHIGKAAGIVTVLRGLPLVAFPPPPNHHSN 179

Query: 191 ----------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKA 239
                      +G +  PLD++   GL  E     G ++  +  A+   A     +L  A
Sbjct: 180 QDSLGAGGGSRQGHITLPLDVMAQTGLKEEDVFRQGADAPGLRDAVFTVATRASDHLITA 239

Query: 240 REEMRYILP-------------------------------------------DVFPAFIP 256
           R+ ++ +                                               F   +P
Sbjct: 240 RQMLKNLRAGKDVGHDFEHEGEEGHEYYQNQAESGDSASKQSNFAVQLQEVERGFGILMP 299

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              T+  L   Q   F I +          PW    +  +K F
Sbjct: 300 ALPTKLWLDKLQKVDFDIFNSELLSTDWKMPWKAYWAFQRKVF 342


>gi|146297824|ref|YP_001192415.1| squalene/phytoene synthase [Flavobacterium johnsoniae UW101]
 gi|146152242|gb|ABQ03096.1| Squalene/phytoene synthase [Flavobacterium johnsoniae UW101]
          Length = 279

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 90/292 (30%), Gaps = 25/292 (8%)

Query: 14  EKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S    + + ++      +A  +  P  R ++  +Y F      + D+  +   
Sbjct: 2   KSLFDAVSFKCSKLVTKNYSSSFSIAVKMLSPSIRDAIYSIYGFVRFADEIVDSFHDYEK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +   +     E      +  S++P        V++Y++ +      +++   D    +
Sbjct: 62  EYLIDDF---EKEYYKAMELGISLNPILNSFQHTVKEYNITDDLVQAFLKSMKLDLIKST 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---YAGIAQFIGQLICQLPIH 189
                ++  Y +  +  +  +   +  S +     ++ +     G A      +  L   
Sbjct: 119 YNTQTEYADYIYGSADVVGLMCLKVFVSGKEQKYEQLKEEAMRLGSAFQKVNFLRDLKDD 178

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
                + YFP   L     D +                   +   +    A + +  +  
Sbjct: 179 STILNRAYFPGINLSNFNEDSKE---------------QIIKEIEEDFRIAYQGIVKLPI 223

Query: 249 DV-FPAFIPVSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +  F  +      + +LK  +N    +I +     +   +   +  S +  +
Sbjct: 224 EAKFGVYTAYVYYKKLLKKLKNTPSHEIGNARIRVSNYTKAGLLAQSFVTYK 275


>gi|229579452|ref|YP_002837850.1| Squalene/phytoene synthase [Sulfolobus islandicus Y.G.57.14]
 gi|228010166|gb|ACP45928.1| Squalene/phytoene synthase [Sulfolobus islandicus Y.G.57.14]
          Length = 298

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 25/263 (9%), Positives = 73/263 (27%), Gaps = 12/263 (4%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
             +      Y + LL P   R  ++ LY F      + D+    +      +++      
Sbjct: 27  IFKKSSITYYNSTLLFPREIRRDVTKLYAFVRVFDDLVDSVPQKVK-----EFYSLRELY 81

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
             +     S        + ++R+     ++    + +   D      +   +   Y +  
Sbjct: 82  YKELDNGSSGDIVLSNFVEMMRRRGFKEEWVEAFLNSMESDLKKKVYYTIDETLGYMWGS 141

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +  +  +   IL+    +A     +  G A      I  +      G+ Y P++ +    
Sbjct: 142 AEVVGLMMMKILNLRDEAAYY--ARMLGRAMQYLNFIRDVREDMEMGRQYLPVNEMKEFK 199

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLK 265
           +        + ++     ++   +    +  +A      I    +        + +   +
Sbjct: 200 VSSLL----ECNEAFKEFMRFNLKRYFFFQKEAERGYHMIPSRYLIAVKTAGDMYKWTAR 255

Query: 266 HAQNHGFKIVSHSHTPNQLVRPW 288
                   +      P +     
Sbjct: 256 RIMADPCVVNRMKVKPKRRRVLA 278


>gi|169614247|ref|XP_001800540.1| hypothetical protein SNOG_10261 [Phaeosphaeria nodorum SN15]
 gi|111061476|gb|EAT82596.1| hypothetical protein SNOG_10261 [Phaeosphaeria nodorum SN15]
          Length = 356

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 98/333 (29%), Gaps = 65/333 (19%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L+  D   ++     P   R +   +  F+ ++ RV DT   P    MR+Q+W+D    +
Sbjct: 26  LKTYDAPSHVLQTFIPQSSRDAYLAIRAFNVDVARVADTTSTPTIGMMRMQFWRDTVTKA 85

Query: 88  TKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
             G       P ++ L             +      +   +I        N         
Sbjct: 86  LAGTP--PKEPVAILLARAAEDLDSRSSGKSRFSKSWLHRIIRTREEHLTNPPYPTLGAL 143

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY--------- 190
           E YA    S +++L    L     +    +  + G A  I  ++  +P+           
Sbjct: 144 ETYAENTYSTMLYLTLSALPQASLTT-DHIASHIGKAMGIAAVLRGIPLVAFPPPQPLGT 202

Query: 191 ----------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKA 239
                      +G +  PLD++    L  E     G ++  +  A+   A     +L  A
Sbjct: 203 SNSMTGQSGPTQGAVLLPLDVMAESNLREEDVFRQGSSAPGLRDAVFTVATRANDHLITA 262

Query: 240 REEMRYILPD----------------------------------VFPAFIPVSITESVLK 265
           RE +  +  D                                   F  F+P   T+S L 
Sbjct: 263 REMLAKLRSDGTLGHDFEHQHEEEHQYAPQVDASKEGKLAEVEQAFGVFMPSVATQSWLD 322

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             Q   F +            P     +  +++
Sbjct: 323 RLQKADFDVFDEGLRKVDWKLPVKAYWAYSRRK 355


>gi|126737776|ref|ZP_01753506.1| hypothetical protein RSK20926_19082 [Roseobacter sp. SK209-2-6]
 gi|126721169|gb|EBA17873.1| hypothetical protein RSK20926_19082 [Roseobacter sp. SK209-2-6]
          Length = 258

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 97/287 (33%), Gaps = 33/287 (11%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
            F  D       ++  D DR+LA + +P   R  L  LY F+ E+ R    ++  +  +M
Sbjct: 2   QFDADLTACAELVQQGDPDRFLATMAAPVEARPLLFALYAFNLEMSRAPWASQESMIAEM 61

Query: 76  RLQWWKDIFESSTKGLIAESIS---PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           RLQWW+D      +G          P +  L   +            M EA  +D Y D 
Sbjct: 62  RLQWWRDTGAEIAQGGPVRRHHIATPLARRLDPSLAT------CIDAMAEARRWDIYRDP 115

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
             D    + Y    S  L+ +A     +    A    ++       +      +P    +
Sbjct: 116 FEDAADLDRYIDATSGNLMWMAA----AALGEADESTVRSFAYGAGLAGWFRAIPELVAQ 171

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            ++                       D  S  ++  A+ GL  +  A      +      
Sbjct: 172 KRVPLL--------------------DGTSEGVRTLAKKGLSKIKAAHRHRGKVSRPASA 211

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           A +P    +++LK    +  ++   +   ++  R   +L +S   R+
Sbjct: 212 AMLPGWQAQAILKQVVENPDRVAEGALGTSEFRRRSSLLWASSTGRW 258


>gi|313236511|emb|CBY11825.1| unnamed protein product [Oikopleura dioica]
          Length = 292

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 94/283 (33%), Gaps = 5/283 (1%)

Query: 20  DSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            +    + ++  +++ ++    +S    R SL  L  F+  ++   +    P     R+ 
Sbjct: 12  SATHCAQLVKKAEWENFICISSVSDIEKRRSLFALRAFNIAILTSIEKVSQPAFAQARIT 71

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF--DSYNDSIFDC 136
           + K             +  P   EL   V  +  P  +   +I                 
Sbjct: 72  FLKTGLADIYAKDKVHAEHPILDELSFAVNSHKYPKAWLQRLISERLKDDRLTKQPFETL 131

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
           K FE Y    +  L  L+ M  + +  +      K+A     +  ++    +     ++ 
Sbjct: 132 KDFEKYHEATTGSLWLLSLMSANVKDVN-CDVAAKHAARCVALANILRAQAVM-KTREIV 189

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PL+ + A  +D    +  +N ++I   I   A +    L K +     I       F  
Sbjct: 190 IPLEFIAAHKVDMRRLVEKKNDEKIEEMIFDIATVAHANLTKIQSMRSKIPDQAHDIFRQ 249

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           ++  E+ LK+ Q   F +   S +         +    +K+ F
Sbjct: 250 LTGAETYLKNLQAKNFNLFDPSLSVRNDFLALQIFKKKMKREF 292


>gi|149914709|ref|ZP_01903239.1| hypothetical protein RAZWK3B_13989 [Roseobacter sp. AzwK-3b]
 gi|149811502|gb|EDM71337.1| hypothetical protein RAZWK3B_13989 [Roseobacter sp. AzwK-3b]
          Length = 283

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 99/288 (34%), Gaps = 27/288 (9%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           ++   F  D +   + +   D +R+ A + +P L R +L  +Y F+ E+ R     +  I
Sbjct: 23  RDAMTFDDDLIACAQAVERGDPERFAATMAAPVLARPTLFAIYAFNIEVSRASWVTQESI 82

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
             +MRLQWW+D         +          L  ++            ++E   +D Y +
Sbjct: 83  IAEMRLQWWRDALAEIRDRGVV-RRHEVVTPLAHVLDAEGATL--LDRLVEMRRWDIYRE 139

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
              D   F  Y    S  L+  A   L        L+    AG A  I   +  +P    
Sbjct: 140 PFEDMSHFRDYIDATSGHLMLAAARALGPVPREPVLQ----AGRALGIANWLRAVPALEK 195

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
            G++                       +    A++  A  GL+ L KAR +   +     
Sbjct: 196 AGRIPLV--------------------EGTPEAVRALANEGLQALAKARAQRHDVPRAAR 235

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           PA +P+ +   VL  A     ++         +     ++  ++   +
Sbjct: 236 PALLPLWLAGPVLSRAARDPGRVAEGRLDVAPMQARLALMGRALSGLW 283


>gi|325104938|ref|YP_004274592.1| Phytoene synthase [Pedobacter saltans DSM 12145]
 gi|324973786|gb|ADY52770.1| Phytoene synthase [Pedobacter saltans DSM 12145]
          Length = 278

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 80/292 (27%), Gaps = 26/292 (8%)

Query: 14  EKIFSR-DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           +K+F         +  +       L  L   P  R S+  +Y +      + D+      
Sbjct: 2   KKLFDELAYDVSKKTTQKYSTSFSLGILALKPSIRKSIYAIYGYVRLADEIVDSFHGYDK 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             +     +   E+        S++P        V +Y +  +     + +   D     
Sbjct: 62  EKLLN---RLNIETHNALEEGISLNPILQSFQETVNKYHIDKKLIEQFLHSMAMDLQKID 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMIL---DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
               + +  Y +  +  +  +   +    + E+Y          G A      +  L   
Sbjct: 119 YNS-ELYNEYIYGSAEVVGLMCLQVFTEGNKEQYEKLKPYAMKLGSAFQKINFLRDLKDD 177

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           Y   G+ YFP   +G                                  +A E ++ +  
Sbjct: 178 YQILGRTYFPDIDMGVFDNY---------------VKCQIEREIEAEFSEALEGIKKLPS 222

Query: 249 DV-FPAFIPVSITESVLK-HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              F  ++      S+     +    +I+ +        + +    S ++ +
Sbjct: 223 SSMFGVYLAYKYYLSLFDKIKKKSSKEILENRIRIPNSQKVFVAFESYLRYK 274


>gi|126666907|ref|ZP_01737883.1| Phytoene synthase [Marinobacter sp. ELB17]
 gi|126628623|gb|EAZ99244.1| Phytoene synthase [Marinobacter sp. ELB17]
          Length = 323

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 81/268 (30%), Gaps = 6/268 (2%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              LR      Y A  L       S + LY     +  + D A  P       +   +  
Sbjct: 15  ADVLRRKGKSFYWAGQLLTAEQLESAADLYQICRSIDDLADEASTPAQAMAAERQLGEFH 74

Query: 85  ESSTKGLIAESISP-FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
           ++          +P    +  S++  Y +      D+++    D     + D  +   Y 
Sbjct: 75  QALISRPTLADENPNLYQQAESLLGDYPMALSALGDLVDTVRSDLDLVRVADQAELLRYC 134

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           + ++  +  + T +L++     +L      GIA  +  +   +    H  +LY P D   
Sbjct: 135 YGVAGTVGVMMTCLLNAREREKALPYAIDLGIAMQLTNISRDVLEDAHLNRLYLPADGAT 194

Query: 204 AVGLDRESFLSGQNSDRISL--AIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSIT 260
              +  E  ++G    R S    ++    +   Y     + + Y+      A      I 
Sbjct: 195 GA-IAPEDIVAGNRVARHSAWLGVRDLLGMSEAYYCSGWQGLGYLPFRARLAIAVAAKIY 253

Query: 261 ESVLKHAQNHGFK-IVSHSHTPNQLVRP 287
             + +     G +             + 
Sbjct: 254 RQIGRQILQRGEQRYWQSRCVVGSAEKL 281


>gi|291003522|ref|ZP_06561495.1| squalene/phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
          Length = 299

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 7/268 (2%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R    +  +A  L P   R  L  LY F   +    D A  P  R   L           
Sbjct: 33  RMRSENFPVAAGLLPRRVRRHLGALYGFFRLVDYAGDEA--PGDRGTLLDLLDAELGRCY 90

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +     + +P    L   VR+  +P +    MIEA+  D              Y    ++
Sbjct: 91  Q---GTARTPVLRMLGPTVRECGIPRELMAKMIEANRQDQRVRRYETFDDLRDYCALSAN 147

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +   A + +      A + +      A  + +    +     +G++Y P + L   G  
Sbjct: 148 PVGE-AVLHVFGRPEPALISLSDKICTALQVLEHCQDIREDLEQGRVYLPAEDLKRFGCG 206

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHA 267
            +         ++   I+       + L      +  +           V+   +     
Sbjct: 207 DDDLRRAVAPTKLRGLIRFEVGRARRMLRAGSPLVHLLSGLGSVAVAGYVAGGFATAAAF 266

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +  G+  ++    P +L        + +
Sbjct: 267 EAAGYDPLAVDVRPTRLRTAGEWARTWL 294


>gi|262196590|ref|YP_003267799.1| Phytoene synthase [Haliangium ochraceum DSM 14365]
 gi|262079937|gb|ACY15906.1| Phytoene synthase [Haliangium ochraceum DSM 14365]
          Length = 276

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 9/262 (3%)

Query: 36  YLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAES 95
           Y A        R ++  +Y F        D    P     R++ W+   ++         
Sbjct: 16  YFAFAFLDRPQRSAIRDVYRFARAADDAADDPGAPADTLRRVRAWRRELDAVYA---GHP 72

Query: 96  ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
             P+   L   VR+Y LP  YF  ++     D     +   ++ E Y   +++ L +L+ 
Sbjct: 73  RHPYGRRLARAVRRYRLPRSYFDTLLSGLERDCARPRMASWREVESYCETVAAPLAYLSL 132

Query: 156 MILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSG 215
            IL +   +A     +  G+A  +  ++  +     RG++Y P D L A G+  +  L+ 
Sbjct: 133 HILGASGAAAERY-ARDVGVAIQLANILRDIAEDAERGRVYLPGDELRAAGVAADEILAR 191

Query: 216 QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP---VSITESVLKHAQNHGF 272
             S  +    +  AE     +  AR  +           +P     +  ++L   +  GF
Sbjct: 192 HMSPALGRVCQHQAERARTLIATARRGLD--PATRRKLLVPEIWADVYLALLDELEASGF 249

Query: 273 KIVSHSHTPNQLVRPWYMLSSS 294
            +  H     +  +    L   
Sbjct: 250 DVFRHRPYLQRRRKLALALRRW 271


>gi|124266481|ref|YP_001020485.1| putative terpenoid synthase-like protein [Methylibium
           petroleiphilum PM1]
 gi|124259256|gb|ABM94250.1| putative terpenoid synthase-related protein [Methylibium
           petroleiphilum PM1]
          Length = 276

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 90/271 (33%), Gaps = 4/271 (1%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-RLQWWKDIFESST 88
           D   +  +A LL PP  R +++ +Y++      + D    P  + +  L  ++    +  
Sbjct: 4   DHYENFPVASLLCPPALRPAVTAVYHYARTADDLADEGDAPAAQRLSDLAAYRADLHAVA 63

Query: 89  KGL-IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
            G  +++  +     L   + ++ LP     D+++A   D       D  +   Y  R +
Sbjct: 64  AGAAVSQRWAAVFEPLSVAIAKHALPLPLLEDLLDAFVQDVVQTRYSDRAELLDYCRRSA 123

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           + +  L   +   +  + SL+       A  +      L I   RG+LY PLD   A G+
Sbjct: 124 NPVGRLLLHLYGVQD-ADSLQRSDAICSALQLINFWQDLSIDLPRGRLYIPLDQCAAHGV 182

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKH 266
           D  +     +S      ++         +      +  +          V      ++  
Sbjct: 183 DEAALFLQHDSVASRALVQAQCAWTRGLMLSGAPLVHRLPGRAGWELRGVVQGGLRIVDK 242

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +   F  +        L  P     +   +
Sbjct: 243 IEALQFATLRRRPRLRALDGPLIAWRACRMR 273


>gi|134100864|ref|YP_001106525.1| squalene/phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913487|emb|CAM03600.1| squalene/phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
          Length = 298

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 7/268 (2%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R    +  +A  L P   R  L  LY F   +    D A  P  R   L           
Sbjct: 32  RMRSENFPVAAGLLPRRVRRHLGALYGFFRLVDYAGDEA--PGDRGTLLDLLDAELGRCY 89

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +     + +P    L   VR+  +P +    MIEA+  D              Y    ++
Sbjct: 90  Q---GTARTPVLRMLGPTVRECGIPRELMAKMIEANRQDQRVRRYETFDDLRDYCALSAN 146

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            +   A + +      A + +      A  + +    +     +G++Y P + L   G  
Sbjct: 147 PVGE-AVLHVFGRPEPALISLSDKICTALQVLEHCQDIREDLEQGRVYLPAEDLKRFGCG 205

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPAFIPVSITESVLKHA 267
            +         ++   I+       + L      +  +           V+   +     
Sbjct: 206 DDDLRRAVAPTKLRGLIRFEVGRARRMLRAGSPLVHLLSGLGSVAVAGYVAGGFATAAAF 265

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +  G+  ++    P +L        + +
Sbjct: 266 EAAGYDPLAVDVRPTRLRTAGEWARTWL 293


>gi|256395791|ref|YP_003117355.1| squalene synthase HpnC [Catenulispora acidiphila DSM 44928]
 gi|256362017|gb|ACU75514.1| squalene synthase HpnC [Catenulispora acidiphila DSM 44928]
          Length = 302

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 79/261 (30%), Gaps = 6/261 (2%)

Query: 33  YDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
            + + +A  + P  +R +L  +Y +   +  + D A       +         +    G 
Sbjct: 37  RENFPVALRILPARHRAALGAVYRYARLIDDIGDEAPPADRGRL-FDLVDRDIDRIFAGT 95

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
                 P    + ++ R++ +P      +++A+  D          Q   Y    +  + 
Sbjct: 96  A--PELPALRAIGAVAREHGIPEAPLRKLVQANRQDQEIHRYATWDQLVEYCALSADPVG 153

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
           HL   + D+           +   A  + +    +   +  G++Y P   L   G     
Sbjct: 154 HLVLHVFDAASPERLAL-SDHICTALQVIEHCQDVAEDFADGRVYLPATDLKLFGCTDAD 212

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESVLKHAQNH 270
             +     R+   +   A+     L +    +  +      A    ++   + L      
Sbjct: 213 LGAETTPTRLRGVVARNADRAAALLDEGAPLIGKLDGWARVAVAGYLAGGRATLAALSGG 272

Query: 271 GFKIVSHSHTPNQLVRPWYML 291
            + + +    P++       L
Sbjct: 273 AYDVHAARLRPSRARTLGEAL 293


>gi|294340355|emb|CAZ88736.1| putative Terpenoid synthase [Thiomonas sp. 3As]
          Length = 280

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 93/266 (34%), Gaps = 5/266 (1%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y A    PP  R +L+ L   H  +  +  T  +P     +L WW             
Sbjct: 18  STYYALQRCPPARRAALTLLLDVHVRVRSIVTTVSDPGVAQAKLAWWH---AQMLALDQD 74

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
           ++  P    L    R   L  Q  L +IE+   D   +   D     HY    S + +  
Sbjct: 75  QAEHPCLRALGRCFRDQGLRPQALLGLIESVDIDLRQNRWMDRAALVHYCRAGSGQTLRN 134

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
           A  +L      A L   +  G+A  +   I  L     + ++Y PLD L   G+      
Sbjct: 135 AAALLGLTARPA-LDAAEELGVALKLTSHIRHLGRDVAQDRVYLPLDALQRHGVKAVDLQ 193

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGF 272
               S  I   ++    L    L  AR  +           + + +I+E++L   +   F
Sbjct: 194 QRVVSPPIRALLQEQTTLARTALSTARGALTPYPAAQTAPLLALGAISEALLSEIERADF 253

Query: 273 KIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++    +   L + W   + ++++R
Sbjct: 254 AVLHQRISLTPLRKLWISRTCTLRRR 279


>gi|169779279|ref|XP_001824104.1| hypothetical protein AOR_1_682094 [Aspergillus oryzae RIB40]
 gi|238499907|ref|XP_002381188.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|83772843|dbj|BAE62971.1| unnamed protein product [Aspergillus oryzae]
 gi|220692941|gb|EED49287.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 394

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 97/343 (28%), Gaps = 65/343 (18%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +    L   D   Y      P   +     L   +  L  + +T  +     MR
Sbjct: 53  IQAAQKYCSDLLIKYDRPSYTLHTFIPRHAQQFYLALRALNVSLSMIPETTSSHTIGLMR 112

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDS 128
           LQ+W++       G       P ++ L S +         +  +   +   +I A     
Sbjct: 113 LQFWRESIAKILAGTP--PKEPIAILLSSAIADLHERTNGRARISKGWLTRLISARERGL 170

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            ND   D    E YA    S L++L    L     +A   V  + G A  I  ++  LP+
Sbjct: 171 TNDPYPDIAALESYAENTYSTLMYLTLSALPMASVTA-DHVASHVGKAAGIVAVLRGLPL 229

Query: 189 HY-------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIF 228
                                 +G +  PLD++   G+  E     G  +  +  A+   
Sbjct: 230 VAFPAARAAGQQGGQQAGGAARQGAVMLPLDVMAQAGVKEEEVFRLGAEAPGLRDAVFTV 289

Query: 229 AELGLKYLFKAREEMRYILP----------------------------------DVFPAF 254
           A     +L   ++ +  +                                      F  F
Sbjct: 290 ATRASDHLITVQQMLSNLRAGQDVGHDFEHEGEEGHEYEVLGEQRQESPLDEVNRAFGVF 349

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           +P   T   L   Q+  F I       +    PW    +  +K
Sbjct: 350 MPAVGTRLWLDRLQSVDFDIFRPELLRSDWKLPWKAYMAYKRK 392


>gi|260222841|emb|CBA32812.1| hypothetical protein Csp_B15900 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 474

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 2/153 (1%)

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +  +  +A  I        +       G A  +  ++  +     RG++Y P++ L    
Sbjct: 322 AGVVGEVAAGIFGQTDPQTTQY-AHKLGQALQLTNILRDVGEDAMRGRIYLPVNELQQFD 380

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLK 265
           +     L    SDR    +K  A+       +A   +         P  +  SI  ++L 
Sbjct: 381 VKAHEILKRSYSDRFVALMKFQAQRAQGLYDEALALLPAADRRTQKPGLMMASIYRALLT 440

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             +   F+++    +   L + W         R
Sbjct: 441 EIERDNFQVLHQRVSLTPLRKFWLAWKVQALGR 473



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 65/196 (33%), Gaps = 8/196 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
               +  +A +L PP  R  ++ +Y+F      + D    +   R   L  ++   + + 
Sbjct: 2   THYENFPVASVLCPPHLRAPIAAIYHFARTADDIADEGDASADERLAELALYRSGLDDAP 61

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----IFDCKQFEHYAF 144
           + L           L +    + LP      +++A   D+          D  +   Y  
Sbjct: 62  EALARWPQ--VFGPLRAQRNAHGLPAHLLHALLDAFVQDTEKTRDGTGYRDHAELLDYCS 119

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
           R +  +  L   +   +   + L +      A  +      L +   RG+ Y P D    
Sbjct: 120 RSADPVGRLLLHLYGVQDTES-LEMSDAICSALQLINFWQDLSVDIPRGRYYLPQDACER 178

Query: 205 VGLDRESFLSGQNSDR 220
            G+ +   L+ + +  
Sbjct: 179 FGVSQADILARKQTPN 194


>gi|171059229|ref|YP_001791578.1| squalene synthase HpnC [Leptothrix cholodnii SP-6]
 gi|170776674|gb|ACB34813.1| squalene synthase HpnC [Leptothrix cholodnii SP-6]
          Length = 276

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 90/271 (33%), Gaps = 8/271 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQWWKDIFESST 88
           D   +  +A +L PP  R +++ +Y++      + D    P   R   L  ++    ++ 
Sbjct: 4   DHYENFPVASILCPPALRPAVTSIYWYARTADDLADEGDVPVEQRLADLAQYRSDLHAAA 63

Query: 89  -KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                +   +     L + + Q+ LP Q   D+++A   D +     D      Y    +
Sbjct: 64  GDRRGSGRWAGVFTPLAATLAQHALPLQLLEDLLDAFELDLHQPRHADRDSLLAYCRCSA 123

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           + +  L   +       A LR       A  +      + +   RG+LY PL      GL
Sbjct: 124 NPIGRLLLHLYGVHEAGA-LRQSDAICTALQLINFWQDVSVDLPRGRLYLPLADCERHGL 182

Query: 208 D----RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-S 262
           D      S  +  ++ R +  +   A      +    + + ++   +      V      
Sbjct: 183 DAQALLASASARADARRCAPLVAELAAWTRAMMTDGADLVHHLPGRLGWELRLVVQGGLR 242

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +L   +     + +     +    P  +  +
Sbjct: 243 ILDKVEALQGGVFTQRPKLHAWNGPRLLWRA 273


>gi|290955846|ref|YP_003487028.1| squalene/phytoene synthase [Streptomyces scabiei 87.22]
 gi|260645372|emb|CBG68458.1| putative squalene/phytoene synthase [Streptomyces scabiei 87.22]
          Length = 300

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 71/272 (26%), Gaps = 14/272 (5%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL----------- 77
           +    +  +A    P  +R  L  +Y F   +  + D    P   D RL           
Sbjct: 19  KAGAENFPVAPFFLPRAWREDLMAVYGFARLVDDIGDGDLAPGGADARLLGVGPRDADDR 78

Query: 78  -QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
                       K        P    L   VR   L  + FL +I A+  D         
Sbjct: 79  LLLLDAFEADLAKVFDGTPGHPLLRRLQRTVRGRRLAPEPFLALIAANRQDQLVKRYETH 138

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y    ++ +  L   +  +               A  I + +  +     R ++Y
Sbjct: 139 DDLLAYCALSANPVGRLVLAVTGTTTPERVRH-SDAICSALQIVEHLQDVSEDLGRDRIY 197

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI- 255
            P   L    +      +      +   I   AE     L +    +  +   +      
Sbjct: 198 LPAADLKRFYVQEADLAAPAAGAPVRALIAYEAERARSLLDEGTPLVGSVHGRLRLLLAG 257

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
            V+   + L      G  ++     P +L   
Sbjct: 258 FVAGGRAALHAIAAAGHDVLPGPPKPGRLRLL 289


>gi|70997284|ref|XP_753392.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|66851028|gb|EAL91354.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|159126881|gb|EDP51997.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
          Length = 393

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 97/347 (27%), Gaps = 66/347 (19%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           E        +    L   D   Y      P   +     L   +  L  + +T  +    
Sbjct: 48  EAEVQAARKYCSDLLLKYDRPSYTLSTFIPRKSQTFYLALRALNVTLSMIPETTSSYTIG 107

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHF 125
            MRLQ+W+D       G       P ++ L S +         Q  +   +   MI A  
Sbjct: 108 LMRLQFWRDAITKIFAGSP--PKEPIAILLASAITNLNERTQGQARISRAWLNKMINARE 165

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
               ND        E YA    S L++L    L     +A   V  + G A  I  ++  
Sbjct: 166 QTLTNDPYPTIAALETYAENTYSTLLYLTLSSLPMTSITA-DHVASHIGKAAGIAAVLRG 224

Query: 186 LPIHY--------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLA 224
           LP+                       +G +  PLD++   G+  E     G ++  +  A
Sbjct: 225 LPLVAFPPPQAQSPTQPASGNFGGTKQGAVMLPLDVMAQAGVKEEDVFRMGGDAPGLRDA 284

Query: 225 IKIFAELGLKYLFKAREEMRYILP----------------------------------DV 250
           +   A     +L   ++ +  +                                      
Sbjct: 285 VFTVATRASDHLITVQQMLSNLRAGQDVGHDFEHADEEGHEYLANRDQRDESPLDEVNRA 344

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           F  F+P   T   L   +   F I       +    PW    +  +K
Sbjct: 345 FGVFMPAVSTRLWLDRLEKVDFDIFRPELLRSDWRLPWKAYLAFNRK 391


>gi|67906785|gb|AAY82848.1| predicted phytoene synthase CrtB [uncultured bacterium
           MedeBAC46A06]
          Length = 305

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 88/284 (30%), Gaps = 20/284 (7%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            ++L       + A            + LY F   L  + D   +      RL   ++  
Sbjct: 9   EQSLAANGKSFHWARRFLGDRMGHDAARLYAFCRLLDDMADG--DIEDGPARLAIIREDL 66

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA-HFFDSYNDSIFDCKQFEHYA 143
            +   G       P     L ++ +   P +  + +I+      +   ++ D      YA
Sbjct: 67  LAGRGG-----DDPAFAAFLPLMHEKQFPPEVLVALIDGLLEDQAAEVALADEAALLRYA 121

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           +R++  +  L   +LD    +A    I   GIA  +  +   +      G+ Y P D +G
Sbjct: 122 YRVAGTVGLLMCHVLDCHSPAARAHAID-LGIAMQLTNIARDVLEDAQMGRRYIPGDWVG 180

Query: 204 AVGLDRESFLSGQNSD------RISLAIKIFAELGLKYLFKAREEMRYILPDV-FPAFIP 256
             G   +   +            +++A+    +L   +         ++         + 
Sbjct: 181 --GATPDDIRAAAQDPSAPPAEAVTVAVGRLLDLAEAFYASGASGYPFLPWRAHLSIAVA 238

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPW--YMLSSSIKKR 298
             +   +    +  G          ++  +     +  +S ++R
Sbjct: 239 ARVYRQIGVQLRGAGLAWHQGRQVTSKATKLRCSLVALASFRRR 282


>gi|226944180|ref|YP_002799253.1| Squalene/phytoene synthase [Azotobacter vinelandii DJ]
 gi|226719107|gb|ACO78278.1| Squalene/phytoene synthase [Azotobacter vinelandii DJ]
          Length = 377

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/321 (10%), Positives = 87/321 (27%), Gaps = 35/321 (10%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR----- 68
           E   +    +    L  +     L     PPL R +++  Y        + D        
Sbjct: 11  ESSTTSADAYQNAILSKVSRTFALTIPQLPPLLRRAVTNAYLLCRIADTIEDEPAFSAEE 70

Query: 69  ---------NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
                    + +T  +  Q++     S      +E+      +L  +++  +        
Sbjct: 71  KRRYEDAFIDAVTGRIAPQYFSTELASRFSTETSEAERDLVSQLPLVLQVTNSLKPAQRM 130

Query: 120 MIEAHFFDSYNDSI-----------FDCKQFEHYAFRISSRLIHLATMILDS------ER 162
            I        +                    + Y + ++  +  + T +L         +
Sbjct: 131 AIVNCLKVMSHGMHDFQRNVGQHGLETLCDMDCYCYCVAGVVGEMLTELLIDFDPALASQ 190

Query: 163 YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRIS 222
               +R+    G    +  ++      Y RG  + P D+    G+  E   +G+      
Sbjct: 191 RDPLMRLAISFGQGLQMTNILKDQWEDYRRGVCWLPQDVFARYGVRLEELQAGRQDANYM 250

Query: 223 LAIKIFAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHS 278
            A+     +   +L  A E    I              + +    L+  Q +        
Sbjct: 251 SALTELIGVAHAHLRDALEYTLMIPNRHSGFRRFCLWSIGLAVLTLRKLQQNPHFSAGEQ 310

Query: 279 HTPNQLVRPWYMLSSSIKKRF 299
              ++    + +  + +   +
Sbjct: 311 VKVSRKAVAYTIALTRLTGNY 331


>gi|254465614|ref|ZP_05079025.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
 gi|206686522|gb|EDZ47004.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
          Length = 266

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 100/284 (35%), Gaps = 27/284 (9%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
            F  D       ++  D DR+LA + +P   R  L  LY F+ EL R    ++  +  +M
Sbjct: 10  QFDADLTACAELVQKSDPDRFLAAMAAPVQARPLLFALYAFNIELARAPWASQESMIAEM 69

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           R+QWW+D+      G         +  L   +R           M EA  +D Y D   D
Sbjct: 70  RVQWWRDVGAEIADGKPV-RRHYVATLLARCLR--PDLAACIDGMAEARRWDIYKDPFED 126

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
              F+ Y  R S  L+ +A     +    A   V++       +   +  +P    + ++
Sbjct: 127 QSAFDSYIDRTSGSLMWMAA----ASLGRADEAVVRDFAYGAGVANWLRAIPELEAQKRI 182

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
                 L                      ++  A  GL+ ++K+R     +      A +
Sbjct: 183 PLLDGTL--------------------EGVQALARKGLEKIYKSRMGGGKVSKQSGAALL 222

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                E +LK A     ++   +   ++  R   ++  +   R+
Sbjct: 223 AGWQAEGLLKQAVRQPERVAQGALGQSEFRRRAGLMWRTALGRW 266


>gi|114570444|ref|YP_757124.1| hypothetical protein Mmar10_1894 [Maricaulis maris MCS10]
 gi|114340906|gb|ABI66186.1| conserved hypothetical protein [Maricaulis maris MCS10]
          Length = 273

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 92/272 (33%), Gaps = 7/272 (2%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            LR+ D DRYL  + + P  R +L  LY    EL RV  +    +  +++L WW+D    
Sbjct: 9   LLRNADPDRYLCAMFAQPDQRAALLALYGLEHELARVALSPSESLIGEIKLIWWRDAVTD 68

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                        +  L  +  +        + +I+A F D       D      +    
Sbjct: 69  LGASPPKVRRHEVTEGLARLGDRIGPS--DLMPLIDARFDDISARPFADLDDVLAHVDAT 126

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           +  L+ L+  +      S S  +++ AG A  +  L+   P     G+     D L    
Sbjct: 127 AGVLVRLSLRL-VGASDSVSPGLMRAAGRAWGLTGLLRAFPQRARIGRAPVGADELARQD 185

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKH 266
                   G  S++I+ A +   E               +  +  PA     +  + L  
Sbjct: 186 ATPAMLAQGLGSEKIAAARQPVIEAARAACETVMSS-GPLPAEAVPAIGYCRLAATYLDR 244

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                ++I   +   N L R   +   ++  R
Sbjct: 245 LPAGPYQI---APDLNPLGRRLRLTWLALTGR 273


>gi|68164583|gb|AAY87312.1| predicted phytoene synthase [uncultured bacterium BAC17H8]
          Length = 306

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 79/283 (27%), Gaps = 16/283 (5%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            ++L       + A            + LY F   L  + D   +      RL   +   
Sbjct: 10  EQSLAANGKSFHWARRFLGSRMGGDAARLYAFCRLLDDMADG--DIENGPARLTAIRADL 67

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA-HFFDSYNDSIFDCKQFEHYA 143
            +           P     L ++ +   P    + +++           + D      YA
Sbjct: 68  LA-----GRPGDDPALRAFLPLMTEKRFPPDVLIALMDGLLEDQDDVVVLADEAALLRYA 122

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           +R++  +  L   +LD    SA    I   GIA  +  +   +       + Y P   +G
Sbjct: 123 YRVAGTVGLLMCHVLDCHAPSARAHAID-LGIAMQLTNIARDVLEDAQMDRRYLPGTWVG 181

Query: 204 AVG----LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVS 258
                  L       G  +  +  A+     L  ++     E  RY+      +      
Sbjct: 182 NADPGTILAAADDPDGLVAREVRAAVARLLSLADQFYASGAEGYRYLPWRAHMSIAVAAR 241

Query: 259 ITESVLKHAQNHGFKIVSHSHTPNQLVRPW--YMLSSSIKKRF 299
           +   +        F         ++  +     +  + +  RF
Sbjct: 242 VYRQIGVQLAAVEFAWHEGRQVTSRSTKLRCSVLALAGLAGRF 284


>gi|310800519|gb|EFQ35412.1| squalene/phytoene synthase [Glomerella graminicola M1.001]
          Length = 364

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 108/359 (30%), Gaps = 69/359 (19%)

Query: 3   LKFLTKNTRKEEKIFSRDS------LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYF 56
           L+ L K   +  +    D+       +    L+  DYD +L   L P     +   L   
Sbjct: 11  LRRLVKTPPRGTRGIVTDADVVKARKYCQTQLQHSDYDAHLISRLVPARTTDAYLALRNL 70

Query: 57  HTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR-------- 108
           + EL+R+ +   NP+   MR+Q+W++  + +  G       P  V L   ++        
Sbjct: 71  NLELVRLPEQVSNPVIGQMRMQFWRESIDKTFAGKP--PAEPICVLLHQALQDLRARSTA 128

Query: 109 -QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL 167
                   +   +I+       N         E YA    S L++     +         
Sbjct: 129 STASSIKFWVQRLIKTREKHMDNRPYASLAALEEYAENTYSTLMYATLAAMPLRSMH-VD 187

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQ-----------------LYFPLDILGAVGLDRE 210
            +  + G A  I  ++  +P+     Q                 L  PLD++    L  E
Sbjct: 188 HLASHIGKACGIVAVLRGIPVLAAPQQQPAKSHAGPGGGRQDPALLLPLDVMAEANLREE 247

Query: 211 SFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYIL---------------------- 247
                G  ++    A+   A     +L  ARE ++ +                       
Sbjct: 248 DVFRYGPRAEGFQDAVFKVATRANDHLITAREMLKNLKAGQEAGHEFEHQGEAEHVYEHE 307

Query: 248 --------PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                      F   +     +  L + +   F   +   +      PW +  ++ K +
Sbjct: 308 EDDTQQDIRRGFAVLLESVPAQEYLTNLEGTNFDPWAVKAS---WKLPWRLWRATSKNQ 363


>gi|46204978|ref|ZP_00209647.1| COG1562: Phytoene/squalene synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 214

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 63/207 (30%), Gaps = 6/207 (2%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D      ++R      + A LL PP  R S   LY F        D A       +   
Sbjct: 12  ADRAACRASIRAGSKSFFAASLLLPPSVRDSAYGLYAFCRLSDDAVDEAGGDRAAALA-- 69

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
             +     S          P    L  ++ ++ +P      +++   +D           
Sbjct: 70  --RLERRLSAAVAGRPENHPADRALAEVIARHAIPEALPRALLDGLAWDIQGRRYDSLSD 127

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
              YA R++  +  + T+++      A  R     G+A     +   +      G+LY P
Sbjct: 128 LAAYAARVAGAVGAMMTLVMGVRDADALARACD-LGVAMQFTNIARDVGEDARAGRLYLP 186

Query: 199 LDILGAVGLD-RESFLSGQNSDRISLA 224
              L   G+D        + S  +   
Sbjct: 187 KSWLDEAGIDGHAFLADPRLSPGLRRV 213


>gi|194700072|gb|ACF84120.1| unknown [Zea mays]
 gi|224028481|gb|ACN33316.1| unknown [Zea mays]
 gi|224033023|gb|ACN35587.1| unknown [Zea mays]
          Length = 269

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 88/260 (33%), Gaps = 9/260 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +R +R  DY  YL  L   P  R +      F+ E  R  D   +P    MR
Sbjct: 12  LRTSLSYYVRQVRAYDYHHYLCLLHLAPAVRKAAFTFRTFNIETARAMDVVFDPRAGLMR 71

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS---YNDSI 133
           L WWK+  +      + E   P +  L SI+  + +   +    +EA   D+        
Sbjct: 72  LLWWKEGVDKIFGNKLVE--HPVAQALSSIIADHKVSKHWLKRSVEARINDANREEGTIP 129

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               + E Y     S ++++       +   A          +  +  L        ++G
Sbjct: 130 RTSAKLERYVEDTQSTILYMTLQAGGIQSTVADHAASHIGKASGLLLLLKALPHHVNNQG 189

Query: 194 QL-YFPLDILGAVGL---DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
            + Y P  +    GL           +  +R+   +   A +   +L KARE    +  +
Sbjct: 190 TVHYIPASVAEECGLLITREGGRSEVRAGERLLDVVFKVASVAEAHLHKARELAPSVPKE 249

Query: 250 VFPAFIPVSITESVLKHAQN 269
             P  +P    + +L   + 
Sbjct: 250 AIPMLLPALPAQVLLDTLRR 269


>gi|254450793|ref|ZP_05064230.1| phytoene synthetase [Octadecabacter antarcticus 238]
 gi|198265199|gb|EDY89469.1| phytoene synthetase [Octadecabacter antarcticus 238]
          Length = 283

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 82/278 (29%), Gaps = 15/278 (5%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              +         A  L     R+ ++ LY     +  + D     +    +LQ   D  
Sbjct: 4   QAIMTHHARSFAPAARLLHRRDRLRVARLYALCRTVDDIADEIGG-LVGQAQLQGLLDDL 62

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                    +   P +VE   + + + L    F +++     D+    I D    + Y  
Sbjct: 63  NK------PDPQDPIAVEAQDLFKGHPLGLAAFRELVCTVAADTDTTCIADSAALDIYCM 116

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            ++  +  +   +   +   A L+     G A  +  +   +     RG+ Y PL +   
Sbjct: 117 GVAGTVGIMICALF--DVDEAYLKNATDLGRAMQLTNICRDVAEDARRGRRYLPLTLCPH 174

Query: 205 VGLDRESFLSGQN--SDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITE 261
                E   +G          A+        +     R     +   +  A     ++ +
Sbjct: 175 ---CPEDIAAGDPQAIAAAEAAMVCLLNEADELYRSGRSAFEALPWRLRLAVASAAAMYQ 231

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +    +   FK ++         + +    + + + F
Sbjct: 232 GIGTQLRERKFKPLAGRAFVTIKRKVYLATCAVLAELF 269


>gi|218661371|ref|ZP_03517301.1| phytoene synthase protein [Rhizobium etli IE4771]
          Length = 236

 Score =  115 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 116/236 (49%), Gaps = 3/236 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           E   + +    L  LRD D DRYLACLLSP   R +L+ LY F+ EL R+RD    P+  
Sbjct: 3   EGNIATNQDICLAMLRDNDRDRYLACLLSPQDKRGALAALYAFNAELARIRDLVHEPLPG 62

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           ++R+Q+W+D+ E S     + + +P +V LL  +  + LP +  +DMIEA  FD Y+D +
Sbjct: 63  EVRMQYWRDLLEGSAH--GSTAANPVAVALLGAIETHRLPRKTLIDMIEARTFDLYDDPM 120

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-R 192
                 E YA   +S LI LA+++L  E  + S     +AG+AQ   +           R
Sbjct: 121 ETRVSLEGYAGETASALIQLASLVLSPEAAAQSADAAGHAGVAQGGRRPAAADAAASSPR 180

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
             LYF              FL+G++  RIS A++ FA L  +   K +        
Sbjct: 181 PALYFRCRSFRPPASTAIPFLAGEDRQRISAAVEAFAGLRRRASGKGKGGRPIAPA 236


>gi|330752240|emb|CBL87197.1| phytoene synthase [uncultured Sphingobacteria bacterium]
 gi|330752259|emb|CBL87215.1| phytoene synthetase [uncultured Sphingobacteria bacterium]
          Length = 253

 Score =  115 bits (287), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 89/268 (33%), Gaps = 25/268 (9%)

Query: 37  LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
           +       +YR  +  +Y F      + DT  +   + +  ++  D +E+  + +   S+
Sbjct: 1   MGIRAFDKIYRSPIYSIYGFVRFADEIVDTFHDQDKKYLLDKFRFDTYEAIERKI---SL 57

Query: 97  SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATM 156
           +P      ++V +Y++        +++   D Y+    D    + Y +  +  +  +   
Sbjct: 58  NPVLEAFQNVVNKYNIGLDLIDAFLDSMEMDLYDIDF-DEPLLKKYIYGSAEVVGLMCLK 116

Query: 157 ILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESF 212
           +          R        G A      +  +   Y  RG+ YFP             F
Sbjct: 117 VFCQGNQKEYERLVKPACALGSAFQKVNFLRDMKSDYDFRGRTYFPNV----------DF 166

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHG 271
           L+  +SD+I+        +  +    A   ++ +        +       ++    +   
Sbjct: 167 LTFSSSDKIT-----IERVVQEEFDVAYNGIKELPSGARLGVYTAYKYYRALFNKIKLAD 221

Query: 272 -FKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             +I  +        +   + SS++K R
Sbjct: 222 VAEIKENRIRIPNSRKLILLGSSALKNR 249


>gi|296332505|ref|ZP_06874966.1| putative squalene/phytoene synthase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673786|ref|YP_003865458.1| putative squalene/phytoene synthase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150423|gb|EFG91311.1| putative squalene/phytoene synthase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412030|gb|ADM37149.1| putative squalene/phytoene synthase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 268

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 28/270 (10%), Positives = 74/270 (27%), Gaps = 14/270 (5%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
            K          + +   +   Y A    P   R +   +  F                 
Sbjct: 1   MKEIKEAYQQCGQIVSAREPACYKAFSFLPLKQRQAAWAVMAFCHTAA---------NAE 51

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +  L   +   E    G                 + + L ++ F + I A    + +   
Sbjct: 52  ENALSAIEAEAEHVFSGTYNG-NHFLYKAFSHAYQTFTLDSEPFREFIAA--QKAEDKPF 108

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               +   YA++       +   I+   +           G+A  + +L+  +     + 
Sbjct: 109 ECLDELLMYAYQTGGTAGLMMLPIMARRQREQLTHAAGSLGLAIQLIRLMRDIGT-GQQQ 167

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-P 252
           +   P  ++   G   +    G  +   ++  +  A     YL ++++ +          
Sbjct: 168 KSRIPRQVMQQFGYTEDDLQKGVVNKAFTMTWEYIAFEAEAYLEESQDALPLFPQYSQKT 227

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
               + +  +VL+  +     +  H +   
Sbjct: 228 VKAALRLYRAVLEKIRAEQHDVFQHQYDVT 257


>gi|119612142|gb|EAW91736.1| chromosome 8 open reading frame 38, isoform CRA_d [Homo sapiens]
 gi|119612144|gb|EAW91738.1| chromosome 8 open reading frame 38, isoform CRA_d [Homo sapiens]
          Length = 181

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 1/182 (0%)

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQ 177
           + +++    +  + +  + K+ E+YA    S L++L   IL  +   A      + G AQ
Sbjct: 1   MKIVDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQ 59

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            I   +   P H  R +++ P+DI    G+ +E FL       +   I   A     +L 
Sbjct: 60  GIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLK 119

Query: 238 KAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            AR   + +    FPAF+     E  LK  Q   F I   S      + P Y+   S +K
Sbjct: 120 HARSFHKTVPVKAFPAFLQTVSLEDFLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRK 179

Query: 298 RF 299
            +
Sbjct: 180 TY 181


>gi|254469031|ref|ZP_05082437.1| squalene/phytoene synthase, putative [beta proteobacterium KB13]
 gi|207087841|gb|EDZ65124.1| squalene/phytoene synthase, putative [beta proteobacterium KB13]
          Length = 279

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 86/274 (31%), Gaps = 9/274 (3%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIF 84
           R ++   Y+ +      P   + ++  +Y F      + D    +   +  +L+  K   
Sbjct: 13  RVIKKH-YENFSIAKFLPKENKNAIITIYAFARIGDDIADNENLSAKEKQDQLKKIKSQL 71

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           +      +     P  V+L  +++ Y L  QYF  +++A F D+      + K+   Y  
Sbjct: 72  DVIKNHRM--PSEPLFVDLFHLIKTYKLNIQYFYQLLDAFFQDTTKKKYKNEKELFDYYE 129

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             ++    L   +   +          +   A  +  +I  +    ++ ++Y P  ++  
Sbjct: 130 DAANAAGRLYLQVNQLDSKETYKYAN-HVCSAFAMIDMIQDIQEDLNKDRVYLPESLIKQ 188

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL 264
             +D  +   GQ           + +     L   +  + Y           +     +L
Sbjct: 189 YEIDVSALKKGQFHGDWQNFKNYWTDQINNRLVLGKGILNYGNWRFKLEMKLLISAGIML 248

Query: 265 -KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +  +  G    +       +        +   +
Sbjct: 249 SRKIKKRG-NPFN--IKMGPISWFIVFTKAIFLR 279


>gi|284053415|ref|ZP_06383625.1| phytoene synthase [Arthrospira platensis str. Paraca]
          Length = 155

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 1/128 (0%)

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             GIA  +  ++  +     RG++Y PLD L          L+G+  +R    ++   + 
Sbjct: 26  ALGIANQLTNILRDVGEDARRGRIYLPLDDLALFNYTEADLLNGKVDERWRELMRFQIQR 85

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             K+   A E +  + PD+  P +  + +   +L   + + + + +         +   +
Sbjct: 86  ARKFYTLAEEGIAALHPDIRWPVWTALMLYRQILDEIERNEYDVFNQRAYVPTWKKMMCL 145

Query: 291 LSSSIKKR 298
             + ++ R
Sbjct: 146 PLAQLRAR 153


>gi|298709182|emb|CBJ31125.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 323

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 102/314 (32%), Gaps = 34/314 (10%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
           +         ++  DYD YL  LL     R +   +  F+ E   ++D+ R N +   MR
Sbjct: 12  TDPFGHCSDVVKRGDYDGYLYSLLQGAQLRPASLAIRAFNVETAAIKDSVRGNVMPGKMR 71

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIV--RQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           +QWWKD        +      P ++ L  +V  ++  L  ++F  +++A   D       
Sbjct: 72  MQWWKDTMADVF--VGEPPPLPVALALAEVVANQKGGLTRRWFDRVLDARMADLDRTQPE 129

Query: 135 DCKQFEHYAFRIS-----SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
             ++ E YA   +       L             +A      + G A  I  L+  L + 
Sbjct: 130 TLEEMETYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALP 189

Query: 190 YHR-----------GQLYFPLDILGAVGLDRESFLSGQNSD----RISLAIKIFAELGLK 234
                              P D++    L       G   D     ++  +   A +   
Sbjct: 190 PPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKG 249

Query: 235 YLFKAREEM--------RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTP-NQLV 285
           ++  A E +          +    F A +P       L+  Q  GF     S  P +   
Sbjct: 250 HIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFK 309

Query: 286 RPWYMLSSSIKKRF 299
               +  + I ++F
Sbjct: 310 FQLRLGRAVITEKF 323


>gi|119478777|ref|XP_001259437.1| hypothetical protein NFIA_074600 [Neosartorya fischeri NRRL 181]
 gi|119407591|gb|EAW17540.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
          Length = 393

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 97/347 (27%), Gaps = 66/347 (19%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           E        +    L   D   Y      P   +     L   +  L  + +T  +    
Sbjct: 48  EAEVQAARKYCSDLLLKYDRPSYTLSTFIPQKSQTFYLALRALNVTLSMIPETTSSYTIG 107

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHF 125
            MRLQ+W+D       G       P ++ L S +         Q  +   +   MI A  
Sbjct: 108 LMRLQFWRDAVTKILAGSP--PKEPIAILLASAITDLNERTQGQARISKAWLNKMINARE 165

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQ 185
               ND        E YA    S L++L    L     +A   V  + G A  I  ++  
Sbjct: 166 QTLTNDPYPTVAALETYAENTYSTLLYLTLSSLPMTSITA-DHVASHIGKAAGIAAVLRG 224

Query: 186 LPIHY--------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLA 224
           LP+                       +G +  PLD++   G+  E     G ++  +  A
Sbjct: 225 LPLVAFPPPQAQSPTQPASGNFGGTKQGAVMLPLDVMAQAGVKEEDVFRMGGDAPGLRDA 284

Query: 225 IKIFAELGLKYLFKAREEMRYILP----------------------------------DV 250
           +   A     +L   ++ +  +                                      
Sbjct: 285 VFTVATRASDHLITVQQMLSNLRAGQDVGHDFEHAGEEGHEYLANRGQRDESPLDEVNRA 344

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
           F  F+P   T   L   +   F I       +    PW    +  +K
Sbjct: 345 FGVFMPAVSTRLWLDRLEKVDFDIFRPELLRSDWRLPWKAYLAFNRK 391


>gi|254475127|ref|ZP_05088513.1| conserved hypothetical protein [Ruegeria sp. R11]
 gi|214029370|gb|EEB70205.1| conserved hypothetical protein [Ruegeria sp. R11]
          Length = 258

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/283 (19%), Positives = 105/283 (37%), Gaps = 27/283 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D +     ++  D DR+   + SP   R +L  LY F+ EL R    +   +  +MR
Sbjct: 3   FDDDLIACAELVQKGDPDRFQTVMASPVKVRGALFALYAFNLELARAPWASAESMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           +QWW+D+      G         +  L  ++R       +   M EA  +D Y D   D 
Sbjct: 63  VQWWRDVGAEIAAGGPV-RRHFVATPLGQVLR--PDLAAHIDAMAEARRWDIYRDPFEDA 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                +  + S  L+ +A     +   +    V++  G    +   +  +P      +  
Sbjct: 120 AALADHIDKTSGSLMWMAA----ATLGATDETVVRRFGFGVGVANWLRAIPKLEAEKR-- 173

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            PL     VG+                  K  A+ GL+ L +AR++   +     PA +P
Sbjct: 174 VPLLDGTEVGV------------------KALAQSGLEALREARQQRTKVARSALPAMLP 215

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               E++L+ A     ++ +     ++  R   ++      R+
Sbjct: 216 GWQAEAILRQAIAEPQRVAAGELGTSEFRRRAGLIWRVSTGRW 258


>gi|117928900|ref|YP_873451.1| squalene/phytoene synthase [Acidothermus cellulolyticus 11B]
 gi|117649363|gb|ABK53465.1| Squalene/phytoene synthase [Acidothermus cellulolyticus 11B]
          Length = 307

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 78/268 (29%), Gaps = 7/268 (2%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
             +    +  +A  + P   R  L  +Y F   +  + D           L       ++
Sbjct: 28  LAKAGSENFPVALGILPRRLRAELMAIYGFARLVDDIGDETAADRFAL--LDRVDAALDA 85

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
              G   +  +     L + VR      +    ++EA+  D   +      Q   Y    
Sbjct: 86  LFAGKDVDIRA--VAALAAGVRAGHFAEEPLRRLVEANRIDQRVNRYDTFNQLRDYCSYS 143

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAV 205
           +  +  L    L ++       +         I + +  +    H R ++Y P + +   
Sbjct: 144 ADPVGRLVLGALGADTPD-LRVLSDRVCTGLQIVEHLQDVAEDLHHRDRIYLPAEDMARF 202

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVL 264
           G+      + Q + R+   I   A    +    AR   R I            +   + L
Sbjct: 203 GVTEADLRAPQATSRVRALISFEASRARELFTAARPLTRAIPGRAKLAVAAFAAGGLAAL 262

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                  + +++H   P +       L 
Sbjct: 263 HAMARVDYDVLAHRCRPKKSQLLLETLR 290


>gi|296114185|ref|ZP_06832840.1| squalene synthase HpnC [Gluconacetobacter hansenii ATCC 23769]
 gi|295979261|gb|EFG85984.1| squalene synthase HpnC [Gluconacetobacter hansenii ATCC 23769]
          Length = 288

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 26/270 (9%), Positives = 76/270 (28%), Gaps = 9/270 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +  LL     R  +   Y F   +  + D+ + +P  +  RL   + +   + 
Sbjct: 20  AGDENFPVGSLLISRDQRPHVHAYYDFARVIDDIVDSTKLDPQAKIDRLDAMEGVVRGTV 79

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
               A   +  +  +  +  +  +P +   D+I A   D+  +      +   Y    ++
Sbjct: 80  A-APARPDAQTAARVREMFARTGVPVETATDLIVAFRQDAVKNRYDTWDELLEYCRYSAN 138

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGL 207
            +      +      +A          A  +   +           + Y P + +   G 
Sbjct: 139 PVGRFLLALHGEGPETAGP--SDALCTALQVINHLQDCADDLRALDRCYLPREWMAREGA 196

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI-LPDVFP-AFIPVSITESVLK 265
             E          +        +   +   +A      +    +     + V +++ +  
Sbjct: 197 QVEDLYGPYALPALRRVFDAMLDGVDRLNDEASRLPALVHDRRMRMECAVIVGLSKRLAA 256

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
             +      ++     ++      M  +  
Sbjct: 257 RLRRE--DPLAGRVKLSRGDMLAAMGGALR 284


>gi|295676512|ref|YP_003605036.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1002]
 gi|295436355|gb|ADG15525.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1002]
          Length = 278

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 28/276 (10%), Positives = 76/276 (27%), Gaps = 7/276 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +    +  L+ L+    E         +P     +L WW+
Sbjct: 5   DYCQQKAAPPGSSTYYALRQARTASQPLLTALFALRREFEETVKETSDPAVGRTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L + +           +++     D       D      
Sbjct: 65  KEIAALAA---GSPSHPVSKALAAYLPDARAEYPALQELLAGFEMDLDQARYLDYPNLHR 121

Query: 142 YAFRISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
           Y   +      L +    +     + +        G A  + Q + +       G++Y P
Sbjct: 122 YVRGVGGNFASLVSRAAAAGSADDAAQASTWAAPLGEALMLAQFVAETGNDARHGRIYVP 181

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP-AFIPV 257
           +D +    +     ++ + +D  +  ++         +  A   +               
Sbjct: 182 IDEMQRYNVTAADLINRKYTDAFTELMRFETHRARDAVQTALAAVPARARRAQRTLLALA 241

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           ++  ++L   +  G+ ++        + + W    +
Sbjct: 242 ALALALLDEIERDGYHVLHQRIALTPIRKLWIAWRA 277


>gi|212722786|ref|NP_001132196.1| hypothetical protein LOC100193624 [Zea mays]
 gi|194692646|gb|ACF80407.1| unknown [Zea mays]
 gi|194693728|gb|ACF80948.1| unknown [Zea mays]
 gi|224035777|gb|ACN36964.1| unknown [Zea mays]
 gi|238014538|gb|ACR38304.1| unknown [Zea mays]
          Length = 260

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 82/251 (32%), Gaps = 9/251 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 + +R +R  DY  YL  L   P  R +      F+ +  R  D   +P T  MR
Sbjct: 12  LRAALSYCVRQVRAYDYHHYLCLLHLAPAVRKAAFTFRAFNIQTARAMDVVSDPRTGLMR 71

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS---YNDSI 133
           L WWK+  +      + E     +  L S++  + +   +    +EA   D+        
Sbjct: 72  LLWWKEAVDKVFGNKLVE--HLVAHALSSVIADHKVSKHWLKRSVEARINDTNREEGTIP 129

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
               + E YA    S ++++       +   A          +  +  L         +G
Sbjct: 130 GTSAELERYAEDTQSTILYMTLQAGGIQSTVADHAASHIGKASGLLLLLKALPHHVNKQG 189

Query: 194 QL-YFPLDILGAVGL---DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
            + Y P  +    GL           +   R+   +     +   +L KARE    +  +
Sbjct: 190 TVHYIPASVAEECGLLITREGGRSEVRAGVRLPDVVFKVTSVAEAHLHKARELASSVPKE 249

Query: 250 VFPAFIPVSIT 260
             P  +P    
Sbjct: 250 AIPVLLPALPA 260


>gi|116191563|ref|XP_001221594.1| hypothetical protein CHGG_05499 [Chaetomium globosum CBS 148.51]
 gi|88181412|gb|EAQ88880.1| hypothetical protein CHGG_05499 [Chaetomium globosum CBS 148.51]
          Length = 397

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 98/328 (29%), Gaps = 66/328 (20%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             DY+ YL     P   + +   L   + EL R+ +T  NP     R+Q+W+D   S+  
Sbjct: 74  HGDYEAYLIRHFIPHSAQDAYDALRTLNLELARLPETVSNPTIGRFRMQFWRDSVNSTFA 133

Query: 90  GLIAESISPFSVELLSIVRQYDLP---------NQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           G       P SV L S +                 + L +I        N    +    E
Sbjct: 134 GNP--PREPISVLLHSAITNLAARTGGGSASSLKFWLLRLINTREKHMENKPFTNLAALE 191

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY---------- 190
            YA    + L+++    +  +       +  + G A  I   +  +PI            
Sbjct: 192 DYAENTYATLMYMTLAAMPLQSVH-MDHLASHIGKAYGIAASLRGIPILAAPSQPIQGPS 250

Query: 191 -------HRGQLYFPLDILGAVGLDRESFL-SGQNSDRISLAIKIFAELGLKYLFKAREE 242
                      L  PLD++  VGL  E     G N++ +  A+   A     +L  ARE 
Sbjct: 251 GSSVGSTRSPALLLPLDVMAGVGLKEEDVFRRGPNAEGLQDAVFQVATRANDHLITAREM 310

Query: 243 MRYILP---------------------------------DVFPAFIPVSITESVLKHAQN 269
           ++ +                                     F   +        L+  +N
Sbjct: 311 LKNLQAGHEPGHDYEHQEEPEHAHFGTVHDGEDTKLDIQRGFSVLLEAVAAGDYLQRLEN 370

Query: 270 HGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
             F         +    PW +  S  + 
Sbjct: 371 ANFDPFKVK---SSWKLPWGLWKSLRRH 395


>gi|291483565|dbj|BAI84640.1| hypothetical protein BSNT_01842 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 268

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 25/264 (9%), Positives = 71/264 (26%), Gaps = 14/264 (5%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
            K          + +   +   Y A    P   R +   +  F                 
Sbjct: 1   MKEIKEAYQQCGQIVSAREPACYKAFSFLPLKQRQAAWAVMAFCHTAA---------NAD 51

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +  L   +   E    G                 + + L ++ F + I A    + +   
Sbjct: 52  EKALSAIEAEAEDVFSGTYNG-NHFLWKAFGHAYQTFTLDSKPFREFIAA--QKAEDKPF 108

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            +  +   +A++       +   I+               G+A  + +++  +     + 
Sbjct: 109 GNLDELLMHAYQTGGAAGLMLLPIMARRHQEQLTHAAGSLGLAIQLIRILRDIGT-GQQQ 167

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-P 252
           +   P +++   G        G  +   ++  +  A     YL + ++ +          
Sbjct: 168 KSRIPREVMQQFGYTEADLQKGTVNKAFTMTWEYIAFEAEAYLEECQDALPLFPQYSQKT 227

Query: 253 AFIPVSITESVLKHAQNHGFKIVS 276
               + +  +VL+  +     +  
Sbjct: 228 VKAALHLYRAVLEKIRAKQHDVFQ 251


>gi|156057221|ref|XP_001594534.1| hypothetical protein SS1G_04341 [Sclerotinia sclerotiorum 1980]
 gi|154702127|gb|EDO01866.1| hypothetical protein SS1G_04341 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 314

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 80/305 (26%), Gaps = 41/305 (13%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
           +  L+      YLA  +     RI L  L         + D A         +       
Sbjct: 11  VDRLKRKSRSFYLASSVFHGRLRIDLILL-----VADDLVDDANTDSEAREWITKLTHYL 65

Query: 85  ESST----------------KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +                      I +S  P S   L  +  + L +    +++     D 
Sbjct: 66  DLVYGSKETTNMTDSLRPGLDTYIQDSFPPSSYWALRFLPTHILSSAPLYELLAGFKTDL 125

Query: 129 YNDS-----------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------ 171
                          I +      Y+ R++  +  +   ++     +  L   +      
Sbjct: 126 EFHQADSSSETREFPIRNEDDLIAYSTRVAGTVAEMCLELIFHHTSTVILSHRRNDLIHA 185

Query: 172 --YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
               GIA     +   + +    G++Y P   L    L  +  +       I    +   
Sbjct: 186 GARMGIALQCINICRDVTVDAGIGRVYLPTSWLEKESLKPQQVVDNPTGPVIDKLRERLL 245

Query: 230 ELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPW 288
           E       +AR  +  I      +   V      + +  +    K+     T  +L R  
Sbjct: 246 EKAFGIYREARPAIEKIPGHAKVSMRVVVESYVEIGRVMRERERKVTKGRATVPKLRRIG 305

Query: 289 YMLSS 293
            +  +
Sbjct: 306 VVWKA 310


>gi|315425221|dbj|BAJ46890.1| phytoene synthase [Candidatus Caldiarchaeum subterraneum]
 gi|315427776|dbj|BAJ49370.1| phytoene synthase [Candidatus Caldiarchaeum subterraneum]
          Length = 294

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 84/283 (29%), Gaps = 17/283 (6%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
            + K  R ++ +F                  + + L  P   +  +  LY F  +     
Sbjct: 2   LIPKPPRVQKTLF--------NLFHKGSTTYFNSTLFFPDNVKKDVFKLYAFLRKADNYV 53

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           D     +       ++    E        +S      E + +  +     ++    ++A 
Sbjct: 54  DLIPQDVEG-----FYAFKEEYERAASGYQSSDIVINEFVELSNRKKFEQEWITAFLDAM 108

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
             D Y  + +   +   Y +  +  +      I   +    S    ++ G A      I 
Sbjct: 109 ESDLYRKTYYTLDELCVYMYGSAEVVGLFMAKI--LDLPEESYIYARFLGRAMQYINFIR 166

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEM 243
            +   Y  G+ Y P + +   G++           +  +  I++  E  L++   A +  
Sbjct: 167 DIREDYELGRQYLPYEEMRMHGIEDFEPARFCGKHESFARFIRLQIERYLEWQRFAEQGY 226

Query: 244 RYIL-PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           +YI    + P      + +   K    H   +      P +  
Sbjct: 227 KYIPYRYLIPIKTAADMYKWTAKIIHRHPSIVFMRKVKPRKRR 269


>gi|294085696|ref|YP_003552456.1| phytoene synthase [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292665271|gb|ADE40372.1| phytoene synthase [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 311

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 17/267 (6%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L         A            + LY F   L  + D   +    + RL   +   ++ 
Sbjct: 20  LARNGKSFNWAKHFLGDEMGRDAAKLYSFCRLLDDMADG--DIPNGNTRLVAIRGGLKNH 77

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                  +      E    +++ ++     L +I+    D    +  +  +   Y++R++
Sbjct: 78  -----QPTADRTMTEFYPFMQEKNIDRDVVLALIDGLLQDQNVVAHENEDELLRYSYRVA 132

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
             +  +   +L+    +A    I   GIA  +  +   +      G+ Y P   +    +
Sbjct: 133 GTVGLMMCKVLNCHNPAALAHAID-LGIAMQLTNIARDVLEDAMMGRRYLPASWVD--NI 189

Query: 208 DRESFLSGQNSDR------ISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
             +  L+   S        ++  I     L   Y    R  + Y+         + + + 
Sbjct: 190 TADEILAAMRSADTARIELVAAGIDRLLALAEIYYESGRLGLAYLPVRAHISIAVALQVY 249

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRP 287
             +    +N G    +     N L + 
Sbjct: 250 RQIGVQLKNRGTPWQNGRQHTNILTKF 276


>gi|162147408|ref|YP_001601869.1| putative phytoene synthase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209543974|ref|YP_002276203.1| squalene synthase HpnC [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785985|emb|CAP55566.1| putative phytoene synthase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531651|gb|ACI51588.1| squalene synthase HpnC [Gluconacetobacter diazotrophicus PAl 5]
          Length = 298

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 70/254 (27%), Gaps = 5/254 (1%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKG 90
           D +  +  LL     R  +   Y F   +  + DT R  P  +  RL   +D+       
Sbjct: 33  DENFPVGSLLISRRLRPHVHAYYDFARVIDDIVDTDRLAPDAKIARLNAMEDVVLGRRAA 92

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
                    +  +   +    +P     D+I A   D+  +      +   Y    ++ +
Sbjct: 93  PPRRDAQ-TAARVAHALAVTGVPVTTATDLIVAFRQDAVKNRYESWDELVEYCRYSANPV 151

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDR 209
                 +   +   A+         +  +   +           + Y PL  L   G   
Sbjct: 152 GRFLLCLHGED--PATFAPSDALCTSLQVLNHLQDCAADLRALDRCYLPLPWLAREGASL 209

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQN 269
           +   + + S  +   I    +       +A      +          V +  +    A+ 
Sbjct: 210 DDLGACRASPGLRRVIDALLDRVDDLNDEAARLPGLVRDRRMRLEAAVIVGLARRLTARL 269

Query: 270 HGFKIVSHSHTPNQ 283
                ++     ++
Sbjct: 270 RREDPLAGRVKLSR 283


>gi|255035798|ref|YP_003086419.1| Squalene/phytoene synthase [Dyadobacter fermentans DSM 18053]
 gi|254948554|gb|ACT93254.1| Squalene/phytoene synthase [Dyadobacter fermentans DSM 18053]
          Length = 278

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/293 (10%), Positives = 79/293 (26%), Gaps = 26/293 (8%)

Query: 14  EKIFSRDSLFV-LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           + +F   S     +  +       L      P +  ++  +Y F      + D+      
Sbjct: 2   KALFDELSASCSKKTTQLYSTSFSLGIYFLKPSFHKAIYGIYGFVRLADEIVDSFHGYEQ 61

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             M  +  ++  E+  + +   SI+P       +V  Y +  Q     +++   D     
Sbjct: 62  AVMMARIRRETHEAIRERI---SINPILNSFQHVVHTYQIEWQLIDTFLKSMEMDLLQKE 118

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSER---YSASLRVIKYAGIAQFIGQLICQLPIH 189
                 ++ Y    +  +  +   +        Y +        G A      +  L   
Sbjct: 119 H-TQDSYQEYVLGSAEVVGLMCLRVFTENDRALYDSLKPYAMKLGAAFQKVNFLRDLKAD 177

Query: 190 YHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
           Y   G+ YFP                               +        A   +R +  
Sbjct: 178 YQTLGRTYFPGVNFNHFSYAD---------------KVQIQQEIEADFEDALTGIRGLPS 222

Query: 249 DVFP-AFIPVSITESVLKHA-QNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                 ++     + +     +    K+++       + +   M  S ++ +F
Sbjct: 223 SSRRGVYLAYYYYKKLFMRIKETPPEKVMNARIRIPDIDKFGLMFRSLLRHQF 275


>gi|86138282|ref|ZP_01056856.1| hypothetical protein MED193_04241 [Roseobacter sp. MED193]
 gi|85824807|gb|EAQ45008.1| hypothetical protein MED193_04241 [Roseobacter sp. MED193]
          Length = 258

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 101/285 (35%), Gaps = 34/285 (11%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       ++  D DR++A + +PP  R  L  LY F+ EL R    ++  +  +MR
Sbjct: 3   FDDDLTSCAELVQQADPDRFMAVMAAPPEARPLLFALYAFNVELARAPWASQESMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESIS---PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +QWW+DI     +G          P    L + +  +  P      M EA  +D Y++  
Sbjct: 63  VQWWRDIGGEIAQGGPVRRHHVATPLGRLLAAELADHIDP------MAEARRWDIYSEPF 116

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D   F+ Y    S  L+ +A     +    A   V++       I   +  +P      
Sbjct: 117 ADEAAFDGYIDATSGGLMWMAA----ASLGQADETVVRNFAYGVGIANWLRAIPGLVGHK 172

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++                      S+ +    +   +     + +A +    +  +   A
Sbjct: 173 RIPLLDG----------------TSEGLRQLARKGLDR----IQEAEQHSGLVSKEAGVA 212

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQL-VRPWYMLSSSIKK 297
            +     + +LK A     ++   S   ++   R   +  ++ ++
Sbjct: 213 LLSGWQAKPILKQALRQPERVAEGSLGQSEFHRRTGLIWRAARRR 257


>gi|260427061|ref|ZP_05781040.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260421553|gb|EEX14804.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 258

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 95/282 (33%), Gaps = 27/282 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D     R +   D DR+ A + +P   R  L  +Y F+ E+ R     +  +  +MR
Sbjct: 3   FDDDLTACARLVERGDPDRFAAAMAAPVTARAVLFPIYAFNLEVARAPWVTKETMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  +   +             L  ++       +    ++ A  +D Y D   D 
Sbjct: 63  LQWWRDALDEI-RTGGQVRRHEVVTPLARVLDAEG--AEALDRLVGARRWDIYRDGFEDE 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y    S  L+  A              V + AG A  + Q +  +P     G++ 
Sbjct: 120 AHLTRYLEETSGGLMLAAGRA----LGGMPAEVARDAGFAAGLAQFLRAVPELESHGRVP 175

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
                                 D    A+   A  GL  L +AR+ +  +      A + 
Sbjct: 176 LV--------------------DGRPEAVAALAREGLARLARARKGLGAVPRPARAALLA 215

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                 +L+ A     ++ + +   ++  R   ++ ++   R
Sbjct: 216 GWQAGPLLRQAATEPGRVAAGALELSEFRRRAGLMLAAATGR 257


>gi|83591405|ref|YP_425157.1| squalene/phytoene synthase [Rhodospirillum rubrum ATCC 11170]
 gi|83574319|gb|ABC20870.1| Squalene/phytoene synthase [Rhodospirillum rubrum ATCC 11170]
          Length = 297

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 77/261 (29%), Gaps = 14/261 (5%)

Query: 29  RDIDYDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFES 86
           +D   + + +  +L P   R  ++  Y F   +  + D+   +   +  RLQ +++    
Sbjct: 23  KDAGTENFPVGSVLLPARLRPHVARFYAFARAIDDIADSPDLDAAAKIDRLQGFEEAI-- 80

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
            T     +        L   +    +P  + +++I A   D+         +   Y    
Sbjct: 81  -TGRDTTDPAYAKGHALRVSLEATGVPAIHGVELIAAFKQDAVKGRYATWAEMMDYCRLS 139

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAV 205
           ++ +     +I       A         +A  +   +      +    ++Y P D L A 
Sbjct: 140 AAPVGR--YLIDLHGGSRAGYASSDALCVALQVINHLQDCQDDFRVLDRVYLPADWLAAE 197

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS---ITES 262
           G           +  +   +    E   + L  AR     I  D            I ++
Sbjct: 198 GASVSDLDRAACTPGLRRVLDRCLEGTRRLLDAARPLPGDI-IDRRLGLEAAVIVSIAQT 256

Query: 263 VLKHAQNHGFKIVSHSHTPNQ 283
           +           ++      +
Sbjct: 257 LTGRLARQ--DPLAQRVKLGK 275


>gi|154283189|ref|XP_001542390.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150410570|gb|EDN05958.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 386

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 93/334 (27%), Gaps = 78/334 (23%)

Query: 41  LSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFS 100
             P         L   +  L  + DT   P    MRLQ+W+D    +  G       P +
Sbjct: 56  FIPRQTLSFYLALRALNVSLSMIPDTTSTPTIGLMRLQFWRDTITRTLAGKP--PKEPIA 113

Query: 101 VELLSIVRQ--------YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
           + L S + +          +   +FL MI +      N         E YA    S L++
Sbjct: 114 ILLASALSELDTRTGGQARISKGWFLRMINSREQYLTNTPYTSISALESYAENTYSTLLY 173

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ------------------ 194
           L    L     +A   +  + G A  I  ++  +P+    G                   
Sbjct: 174 LTLSALPLTSVTA-DHLASHIGKAAGISTVLRGIPLIAFPGPPNHHSNQHGGLGGGAGGG 232

Query: 195 -------LYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                  +  PLD++   GL  E     G  +  +  A+   A     +L  AR+ ++ +
Sbjct: 233 SGARVGTITLPLDVMAETGLKEEDVFRHGAEAPGLRDAVFTVATRASDHLITARQMLKNL 292

Query: 247 LP-----------------------------------------DVFPAFIPVSITESVLK 265
                                                        F   IP   T   L 
Sbjct: 293 RAGQGVGHDFEHTGEEGHEYNDVSSSGNGGDMSTSSAQLAEVERSFGVLIPAVSTSLWLD 352

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
             Q   F I            PW    ++ ++ F
Sbjct: 353 RLQAVDFNIFKPELRTFDWRLPWKAYWANRRRAF 386


>gi|158336802|ref|YP_001517976.1| squalene and phytoene synthase [Acaryochloris marina MBIC11017]
 gi|158307043|gb|ABW28660.1| squalene and phytoene synthase [Acaryochloris marina MBIC11017]
          Length = 359

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 80/284 (28%), Gaps = 35/284 (12%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL- 77
           +   F    L  +     L+    P     ++   Y        + D     +   +RL 
Sbjct: 14  QVERFCQEILPQVSRTFALSIRFLPGNLGRAVLCGYLLARIADTIEDDPVATVESKIRLL 73

Query: 78  -----------------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDM 120
                            Q    +   +    + E+         S+  +     Q+++  
Sbjct: 74  DKFLACFDDPAQADIFPQVVGTLEGETAHLHLVENTHLVFALFRSLPAKSQQTLQHWITE 133

Query: 121 IEAHFF-----DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
           +           +    I   ++++ Y + ++  + +L T +            Y    +
Sbjct: 134 MVQGMQKFVKLHAQGIRIKTLEEYQEYCYYVAGTVGYLLTDLWFEHSPSVDFATYHTLRQ 193

Query: 169 VIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                G       ++  +     H   +Y P D L + G   E  L  +   +   AI  
Sbjct: 194 TCAAFGEGLQTVNILKDIAWDAEHENSIYVPQDALESHGSSHEKLLDPEFLTQNHAAITS 253

Query: 228 FAELGLKYLFKAREEMRYILPDVFP----AFIPVSITESVLKHA 267
             EL    L KA + +  +     P      +P+    + L+  
Sbjct: 254 LVELAWSDLDKAAQYLMEVPRSAIPIRLFCILPLVFAYATLRDI 297


>gi|212533267|ref|XP_002146790.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210072154|gb|EEA26243.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 395

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 112/375 (29%), Gaps = 82/375 (21%)

Query: 4   KFLTKNTRKEEKIF-------SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYF 56
           + ++++++ +  +             +    +   D   ++     P   +     L   
Sbjct: 24  RNISRSSQWQAPVTGAADAESQSARAYCTNLVSTYDRPSHILSAFIPRQAQTFYLALRAL 83

Query: 57  HTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR-------- 108
           +  L  + DT  +     MRLQ+W+D    +  G       P ++ L + +         
Sbjct: 84  NVSLSMIPDTTSSHTIGLMRLQFWRDTITKTLSGSP--PKEPVAILLANAIEDLSTRTDG 141

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
           +  L   +FL MI A      N    D    E YA    S L++L    L          
Sbjct: 142 RARLSKGWFLRMINAREQTLTNTPFPDLAALESYAENTYSTLLYLTLSSLPLTSV-TVDH 200

Query: 169 VIKYAGIAQFIGQLICQLPIHY-----------------------HRGQLYFPLDILGAV 205
           V  + G A  I  ++  LP+                           G +  PLDI+   
Sbjct: 201 VASHIGKAAGISAVLRGLPLVAFPGPAKHHTNQSALLSSGGAAESKHGAITLPLDIMSQS 260

Query: 206 GLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILP---------------- 248
           G+  E     G  +  +  A+   A     +L  AR+ ++ +                  
Sbjct: 261 GVIEEEVFRKGAEAAGLKDAVFAVATRASDHLITARQMLKNLRAGEDVGHEFEHEGDEGH 320

Query: 249 ------------------------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
                                     F  F+P   T+  L   Q++ F I +     +  
Sbjct: 321 EYTTTTTEKEQGVSPYEKQLAEVERGFGVFMPAVSTQMWLDKLQSYDFDIFNPKLLRSDW 380

Query: 285 VRPWYMLSSSIKKRF 299
             PW    +  KK F
Sbjct: 381 TMPWRAYYAHSKKTF 395


>gi|254436641|ref|ZP_05050135.1| Squalene and phytoene synthases superfamily [Octadecabacter
           antarcticus 307]
 gi|198252087|gb|EDY76401.1| Squalene and phytoene synthases superfamily [Octadecabacter
           antarcticus 307]
          Length = 283

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 78/276 (28%), Gaps = 11/276 (3%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              +         A  L     R+ ++ LY     +  + D     +    +LQ   D  
Sbjct: 4   QAIMTHHARSFAPAARLLHRRDRLRVARLYAVCRTVDDIADEIGG-LVGQAQLQALLDDL 62

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                    +     +VE L + +   L    F +++     D+    I D    + Y  
Sbjct: 63  NK------PDPQDSIAVEALDLFKGQQLGLAAFRELVCTVAADTDTTCIADSAALDIYCM 116

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            ++  +  +   +   +   A L      G A  +  +   +     RG+ Y P   L  
Sbjct: 117 GVAGTVGVMICALF--DVDEAYLENATDLGRAMQLTNICRDVAEDARRGRRYLPFT-LCP 173

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSITESV 263
                 +    Q       A+        +     R     +   +  A     ++ E +
Sbjct: 174 HSPGDIAAEDPQAIAAAEAAMACLLNEADELYRSGRSAFEALPWRLRLAVASAAAMYEGI 233

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               +   F+ ++         + +    + + + F
Sbjct: 234 GTQLRERKFQPLAGRAFVPIKRKVYLAAGAVLAELF 269


>gi|260433633|ref|ZP_05787604.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417461|gb|EEX10720.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 94/283 (33%), Gaps = 27/283 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       +   D DR++A + +P   R  L  +Y  + E+ R     + P+  +MR
Sbjct: 5   FDDDVKACAALVHRADPDRFMAAMAAPVQARAVLFPIYAMNIEVARAPWVTQEPMIAEMR 64

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  +   +G            L  ++  +        + +    +D Y D   D 
Sbjct: 65  LQWWRDALQEIAEGPTV-RRHEVVTPLSRVLSPHL--AAMLDEYVAVRRWDIYRDPFEDE 121

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
             FE Y    +  L+  +         +A   V++  G A  +      +P    RG++ 
Sbjct: 122 AHFEAYLTHSAGSLMVASAQA----LGAADETVLRDFGYAVGVANWFRAIPELEARGRVP 177

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
                                 D     ++  A   L  +  AR     +     PA + 
Sbjct: 178 LL--------------------DGTPDGVRQLARRALDRMAAARARRADVSAQARPALVA 217

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               E VL+        +   +   ++  R   ++ ++   R+
Sbjct: 218 GWQAEWVLRRVVADPTAVSKGALKQSEFRRRASLIWTATTGRW 260


>gi|299133447|ref|ZP_07026641.1| squalene synthase HpnC [Afipia sp. 1NLS2]
 gi|298591283|gb|EFI51484.1| squalene synthase HpnC [Afipia sp. 1NLS2]
          Length = 292

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 79/268 (29%), Gaps = 16/268 (5%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKG 90
           D +  +A  L  P +R  +   Y F      + D     P  +  +L   +       + 
Sbjct: 15  DENFPVASKLIHPRHRALIFAFYNFVRTADDIADHISLPPQEKLDQLDRLEAELLGKGET 74

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
                    +V L     +  +P ++  D++ A   D       +     HY    +  +
Sbjct: 75  QAE------AVALRRAFAERGMPPRHAQDLLTAFRMDVTKLRYDNWDDLIHYCSYSAMPV 128

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDR 209
                 +   +R  A+         A  I   +      Y    ++Y PLD L A G   
Sbjct: 129 GRFMLDVHGEDR--ATWAANDALCAALQINNHLQDCGKDYRDINRVYVPLDALQAAGASV 186

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVLKH 266
           E     + S  +   +K  AE     L ++      +  D         I      ++  
Sbjct: 187 EELGQAKASPALRACLKSLAERNEALLMQSASFSSQV-KDARLGMEIAVIDTFARKIVNL 245

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +      +S +   ++         +S
Sbjct: 246 LKTR--DPLSENVHLSKPAMLMLAAMAS 271


>gi|255262337|ref|ZP_05341679.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
 gi|255104672|gb|EET47346.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
          Length = 254

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 91/279 (32%), Gaps = 27/279 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+LA + +P   R  L  LY  + E+ R     +  +  +MRLQW
Sbjct: 2   SLSACAALVERADPDRFLATMATPVEARRVLFPLYALNVEVSRAPWVTQEAMIAEMRLQW 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D  E    G            L  ++             + A  +D Y+D+  D    
Sbjct: 62  WRDALEEIANGAT-PRKHEVVDALAEVLT--PQQAALLDGFVAARRWDIYSDAFEDPSHL 118

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y    S  L  +          +A   V++       +  L+  +P    RG+     
Sbjct: 119 DEYIDATSGHLTWVVAQC----LGAADESVVREYAYGIGVANLLRAVPELEARGRKPLV- 173

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D     ++  A+ GL  +  AR     +  +   A      
Sbjct: 174 -------------------DGTPQGVRNLAQAGLDRIDSARARKSDVSSEARGALRAGWR 214

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             SVL+ A     +++      ++  R   ++ SS+  R
Sbjct: 215 ARSVLRAAAAVPERVIEGKLEGSEFARKASLIWSSMSGR 253


>gi|56696995|ref|YP_167357.1| hypothetical protein SPO2129 [Ruegeria pomeroyi DSS-3]
 gi|56678732|gb|AAV95398.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 260

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 97/283 (34%), Gaps = 27/283 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       ++  D DR+ A + +P   R  L  LY    E+ R    +  P+  +MR
Sbjct: 5   FDADLTACAELVQRADPDRFAAAMAAPVAARRVLFPLYALAVEVARAPWASAEPMIAEMR 64

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  E    G            L  I+             +    +D Y D   D 
Sbjct: 65  LQWWRDALEELALGKP-PRRHSVVTPLAGILS--PQMAARLDGFVAVRRWDIYRDPFEDD 121

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
                Y  + S+ L+     +  +    A   V++  G A  +      +P    RG++ 
Sbjct: 122 AHLTRYLEQSSASLL----CVCATALGQADEDVLRDYGYATGLANWFRAIPELEARGRIP 177

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
                                 D     I+  AE GL +L +AR +   I P   PA + 
Sbjct: 178 LL--------------------DGTPAGIRRLAEAGLDHLSRARAKRSLISPAARPALLA 217

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              + ++L+  Q H  ++ +     +   R   +   +   R+
Sbjct: 218 GWQSAALLRQVQKHPARVAAGELGLSPFARHLRLSLQAATGRW 260


>gi|37729025|gb|AAO46893.1| lycopene cyclase / phytoene synthase [Blakeslea trispora]
          Length = 608

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 80/274 (29%), Gaps = 22/274 (8%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRL 77
            D       LR      Y A  + P   R  L  LY F      + D    +   R  +L
Sbjct: 287 DDLTISWDILRKASKSFYTASAVFPSYVRQDLGVLYAFCRATDDLCDDESKSVQERRDQL 346

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVR-------------QYDLPNQYFLDMIEAH 124
              +           +  I        + +              ++ L      ++++ +
Sbjct: 347 DLTRQFVRDLFSQKTSAPIVIDWELYQNQLPASCISAFRAFTRLRHVLEVDPVEELLDGY 406

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI----KYAGIAQFIG 180
            +D     I D +  E Y+  ++S +  + T ++ ++    +   I    +  G+     
Sbjct: 407 KWDLERRPILDEQDLEAYSACVASSVGEMCTRVILAQDQKENDAWIIDRAREMGLVLQYV 466

Query: 181 QLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQN--SDRISLAIKIFAELGLKYLF 237
            +   +       G+ Y P   L     ++    + ++    R+              + 
Sbjct: 467 NIARDIVTDSETLGRCYLPQQWLRKEETEQIQQGNARSLGDQRLLGLSLKLVGKADAIMV 526

Query: 238 KAREEMRYILPDVFPAFIPV-SITESVLKHAQNH 270
           +A++ +  +  +          +  ++    +  
Sbjct: 527 RAKKGIDKLPANCQGGVRAACQVYAAIGSVLKQQ 560


>gi|182680057|ref|YP_001834203.1| squalene synthase HpnC [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635940|gb|ACB96714.1| squalene synthase HpnC [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 298

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 87/278 (31%), Gaps = 22/278 (7%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
               +  +A +L  P YR ++   Y F      + D+    P  +  RL  ++      T
Sbjct: 15  HHGENFPVASVLIAPRYRPAILAYYRFARAADDIADSPTLTPKEKIARLDAFEATLLGHT 74

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                      ++ L + + +  +  ++ LD++ A   D+      D  +  HY    ++
Sbjct: 75  DSAAT------ALPLRASLAETGITPRHALDLLTAFRMDAVKTRYADWAELMHYCAYSAA 128

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +     ++       A+         A  +   +      Y    ++Y PLD L A G+
Sbjct: 129 PVGR--YVLAVHGESEATWPASDALCAALQVINHLQDCAKDYREINRVYIPLDTLTAQGI 186

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP------VSITE 261
             E+  + + S  +   +    +     +         + P V    +         + +
Sbjct: 187 GVEALAAPEASTALRACLDGLIDKTADLVATGW----LLPPQVRDIRLRIETAMIAQLAD 242

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            ++   Q      +S      +       +    K  F
Sbjct: 243 KLVTLLQKA--DPLSEKVHLAKFDFLLQAILGLFKGLF 278


>gi|19551857|ref|NP_599859.1| phytoene synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62389515|ref|YP_224917.1| phytoene synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|21323389|dbj|BAB98017.1| Phytoene/squalene synthetase [Corynebacterium glutamicum ATCC
           13032]
 gi|41324849|emb|CAF19331.1| PHYTOENE SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 304

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 69/293 (23%), Gaps = 32/293 (10%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITR 73
                  + + +      L+  L  P  R  +  LY        + D        +    
Sbjct: 20  ASFKASHKVIEEYSTSFSLSTWLLSPRIRNDIRNLYAVVRIADEIVDGTAHAAGCSTAKI 79

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +  L  ++             +            R+ D   ++ +    +   D   ++ 
Sbjct: 80  EEILDAYE--IAVLAAPQQRFNTDLVLQAYGETARRCDFEQEHVIAFFASMRKDLKANTH 137

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERY------SASLRVIKYAGIAQFIGQLICQLP 187
            D   F  Y +  +  +  L   + +  R              +  G A      +  L 
Sbjct: 138 -DPDSFTTYVYGSAEVIGLLCLSVFNQGRTISKKRLEIMQNGARSLGAAFQKINFLRDLA 196

Query: 188 IHYHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                 G+ YFP                G  +               + L  A +    I
Sbjct: 197 EDQQNLGRFYFPKTS------------QGTLTKEQKE---DLIADIRQDLAIAHDAFPEI 241

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKK 297
                        + + +    +      ++         ++   +  +++K 
Sbjct: 242 PVQARIGVISAYLLFQKLTDRIEATPTADLLRERIRVPLHIKLSTLARATMKG 294


>gi|37729028|gb|AAO46895.1| lycopene cyclase / phytoene synthase [Blakeslea trispora]
 gi|60460568|gb|AAX20904.1| lycopene cyclase [Blakeslea trispora]
          Length = 608

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 80/274 (29%), Gaps = 22/274 (8%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRL 77
            D       LR      Y A  + P   R  L  LY F      + D    +   R  +L
Sbjct: 287 DDLTISWDILRKASKSFYTASAVFPSYVRQDLGVLYAFCRATDDLCDDESKSVQERRDQL 346

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVR-------------QYDLPNQYFLDMIEAH 124
              +           +  I        + +              ++ L      ++++ +
Sbjct: 347 DLTRQFVRDLFSQKTSAPIVIDWELYQNQLPASCISAFRAFTRLRHVLEVDPVEELLDGY 406

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI----KYAGIAQFIG 180
            +D     I D +  E Y+  ++S +  + T ++ ++    +   I    +  G+     
Sbjct: 407 KWDLERRPILDEQDLEAYSACVASSVGEMCTRVILAQDQKENDAWIIDRAREMGLVLQYV 466

Query: 181 QLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQN--SDRISLAIKIFAELGLKYLF 237
            +   +       G+ Y P   L     ++    + ++    R+              + 
Sbjct: 467 NIARDIVTDSETLGRCYLPQQWLRKEETEQIQQGNARSLGDQRLLGLSLKLVGKADAIMV 526

Query: 238 KAREEMRYILPDVFPAFIPV-SITESVLKHAQNH 270
           +A++ +  +  +          +  ++    +  
Sbjct: 527 RAKKGIDKLPANCQGGVRAACQVYAAIGSVLKQQ 560


>gi|110680365|ref|YP_683372.1| hypothetical protein RD1_3180 [Roseobacter denitrificans OCh 114]
 gi|109456481|gb|ABG32686.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 259

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 96/278 (34%), Gaps = 25/278 (8%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       +   D DR+ A + SP   R  L  LY F+ E+ R     +  +  +MR
Sbjct: 3   FDADVTACAAIVEKADPDRFAAVMASPVAARPVLFVLYAFNVEVSRAPWLTQETMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  E   +             L   + +     Q    ++ A  +D Y D+  D 
Sbjct: 63  LQWWRDALEEIGQ-GGQARRHEVVTPLSRFLSE--PATQVLDRLVAARRWDIYKDAFEDA 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSE--RYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
             F++Y    ++ L+ +A   LD +         +++  G A  + + +  +P      +
Sbjct: 120 AHFDNYLNETAAGLMWVAACALDPDLTPQGTVEAMVRACGRATGLARFLQAVPALEAHNR 179

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           +                       D  + AI   A   L  L   +   R +     PA 
Sbjct: 180 IPLV--------------------DGRAEAIADLARTALNALPAPKLLKRTLGEAAKPAI 219

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
               +T S+LK       ++ S     + + R   +  
Sbjct: 220 TEAFLTRSLLKQVVQDPRRVASGQLQVHPMRRAALLWR 257


>gi|227503971|ref|ZP_03934020.1| phytoene synthase [Corynebacterium striatum ATCC 6940]
 gi|227199439|gb|EEI79487.1| phytoene synthase [Corynebacterium striatum ATCC 6940]
          Length = 298

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 79/309 (25%), Gaps = 31/309 (10%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           + +  T       +  +       + +        LA  +  P  R  +  LY       
Sbjct: 1   MFRLFTHTPNPLPRYDNGAERAAEQIIAAYSTSFSLASQMLSPQTRTDIRNLYAVVRIAD 60

Query: 62  RVRDTAR-----NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQY 116
            + D A      +P      L  ++     +          P         R+    +++
Sbjct: 61  EIVDGAAAAAGLSPQEVQETLDAYEQAVLQTPHRRFHT--DPILHSYGLSARRCGFKDEH 118

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI------ 170
                 +   D +        +   Y +  +  +  L        +  +S +        
Sbjct: 119 IQAFFASMRRDLHQSVYSTTAELNQYVYGSAEVIGLLCLDAFLVGQPVSSAQRRELEAGA 178

Query: 171 KYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
           +  G A      +  L     + G+ YFP    G+ GL  ES                  
Sbjct: 179 RRLGAAFQKVNFLRDLGADTGQLGRSYFPQA--GSAGLSAES-------------KDELI 223

Query: 230 ELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRP 287
                 L  AR  M  +             + E++           + +   + +   + 
Sbjct: 224 TDIRADLAAARAVMDQLPLTARVGVIAATDLFEALTNDIAALPALALPTKRVSVSIPRKL 283

Query: 288 WYMLSSSIK 296
             +L + +K
Sbjct: 284 ALLLRAPVK 292


>gi|323452718|gb|EGB08591.1| hypothetical protein AURANDRAFT_6120 [Aureococcus anophagefferens]
          Length = 229

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 68/231 (29%), Gaps = 10/231 (4%)

Query: 53  LYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD 111
           +Y +      V D    N       L   +    ++ +       +     L +    Y 
Sbjct: 2   IYAWCRRADDVADEVGVNKGLALASLDEIEADLAAALR---GSPRNAIDAALAATFEAYP 58

Query: 112 L----PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL 167
                P +  L+ +                  + Y  R++  +  +   +L +       
Sbjct: 59  ALSTAPFEAMLEGMRGDLRPESLRFERWDPDLKTYCERVAGGVGLMLLPLLGATPDPVVE 118

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRG-QLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
           R     G+A  +  ++  +        ++Y PL  L A G D E    G+ +     A++
Sbjct: 119 RRAVDLGVAIQLTNVLRDVGADARDYDRVYLPLADLAACGCDLEDVRKGRLTAPYKDAVR 178

Query: 227 IFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFKIVS 276
           +           AR  +  +          +  + ES++   +      +S
Sbjct: 179 LQISRARDLYASARLAIPDLPKASRLPVAAIVELLESIVDELEARDCDSLS 229


>gi|163801008|ref|ZP_02194908.1| Phytoene synthase [Vibrio sp. AND4]
 gi|159175357|gb|EDP60154.1| Phytoene synthase [Vibrio sp. AND4]
          Length = 304

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 88/267 (32%), Gaps = 9/267 (3%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L         A LL         + LYYF   +  + D   +      RL   +D     
Sbjct: 9   LSTYGKTFRFASLLLSRNQVEQSARLYYFCRCVDDIADDTDDKHLARQRLDKVQDQL--- 65

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
              +I  S   F  + L +  Q D+P  Y   +++    D     +    +   YA++++
Sbjct: 66  ---MIGRSSEAFVEDFLKLSHQLDIPVAYASTLVKGVKGDLGAVRVQSKTELIQYAYKVA 122

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
             +  +   IL +++      +    GIA  +  +   +      G+ Y P         
Sbjct: 123 GVVGQMMCPILKADKKGMPYAI--DLGIALQLTNIARDVLEDAKMGRRYLPYQWCPFSPN 180

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKH 266
           +  +        ++S AI+   +L  +Y   AR+   ++      A I   S+   +   
Sbjct: 181 EIVASKHDSVRRQVSAAIEKVLQLADQYYRSARQGYCFLPQQSRRAIIVAESVYRQIGVK 240

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            +  G            L +    +S+
Sbjct: 241 LRQGGLNYWQGRTEVTLLSKVKVAVSA 267


>gi|37523627|ref|NP_927004.1| farnesyl-diphosphate farnesyltransferase [Gloeobacter violaceus PCC
           7421]
 gi|35214632|dbj|BAC91999.1| farnesyl-diphosphate farnesyltransferase [Gloeobacter violaceus PCC
           7421]
          Length = 363

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 84/286 (29%), Gaps = 35/286 (12%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ- 78
             LF    L  +     ++    P     ++   Y        + D         +RL  
Sbjct: 14  ALLFCNAILPRVSRTFAISIRFLPGRLGRAVLTAYLLCRIADTIEDDPAASAGEKVRLLG 73

Query: 79  ---------WWKDIFESSTKGLIAESISPFSVELLSIV---------RQYDLPNQYFLDM 120
                         F +  + +  E+     V    +V             +  ++  +M
Sbjct: 74  EFMAGFDEVETARKFPTLAQSVSGEAAHVELVHHTDLVFELFEGVPAPSRQIVKRWVGEM 133

Query: 121 IEAHFF----DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE-------RYSASLRV 169
           +E          +   I   +++  Y + ++  + HL T +  +        +Y+A L  
Sbjct: 134 VEGMQKFVALYPHGIRIQTLEEYNEYCYYVAGTVGHLLTDLWHAHAPSVDRAKYTALLEH 193

Query: 170 IKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
            +  G A     ++  +     H   +Y P   L   G  +++ LS    ++   AI   
Sbjct: 194 CEAFGEALQTVNILKDIAWDAEHENSIYVPEQSLREHGSSQQTLLSPHCLEQNRAAIASL 253

Query: 229 AELGLKYLFKAREEMRYILPDVFP----AFIPVSITESVLKHAQNH 270
             L    L  A   +  I     P      +P+    + L+     
Sbjct: 254 VALAWADLDAALVYLLAIPRRAVPIRLFCILPLLFAYATLREITRS 299


>gi|297203434|ref|ZP_06920831.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces sviceus
           ATCC 29083]
 gi|297148410|gb|EDY60394.2| long-chain Z-isoprenyl diphosphate synthase [Streptomyces sviceus
           ATCC 29083]
          Length = 631

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/295 (11%), Positives = 84/295 (28%), Gaps = 8/295 (2%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           ++   EE +         R  R  D   +    L+P + R +   L+   + L  + D  
Sbjct: 26  RSLAGEEPVLRAAYRLCRRTTRQHDPGIHALIQLAPAVLRPACWALWAAASVLDDLSDDP 85

Query: 68  R-NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
              P  R  R++ W    +         S  P    L+    ++ L        +     
Sbjct: 86  DVEPDERAARVEAWTRALQHDLA--SGTSTDPVRHALVDTAGRWRLDLSSLHGAMAVTRD 143

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA-----SLRVIKYAGIAQFIGQ 181
           D++   I D   +  +        +     + +                +       +  
Sbjct: 144 DAHGLRITDWAAWRAWCSGGVVPWVDQVRQLFERAGAPMTLRLDRQADYEDFVAGAQLTD 203

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           ++  L +   + +L  P + L +          G  S  ++        L  +++ +   
Sbjct: 204 ILTDLSVDLAQRRLLLPQEALDSFPGADSDLSQGHWSPAVAALTLELTALARRWVTQPVM 263

Query: 242 EMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                            +  + L      G  ++  +  P+ + R   ++ + ++
Sbjct: 264 TRGMHPGAAIMLEAAAGLMRAQLDAVDAAGPALLKRAPRPSVVARTRVLVPARLR 318


>gi|126728608|ref|ZP_01744423.1| hypothetical protein SSE37_07273 [Sagittula stellata E-37]
 gi|126710538|gb|EBA09589.1| hypothetical protein SSE37_07273 [Sagittula stellata E-37]
          Length = 259

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 91/279 (32%), Gaps = 27/279 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D       +   D +R+   + +P   R  L  LY F+ E+ R       P+  +MRLQW
Sbjct: 7   DLHACAEIVERGDPERFAGAMAAPVAARRVLFPLYAFNVEVARAPWVTAEPMIAEMRLQW 66

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D  +    G            L  ++            ++EA   D       +    
Sbjct: 67  WRDALDEIGGGGAV-RRHEVVSPLAEVLDAEG--AAVLDALVEARRADIEKAPFDEPHAL 123

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y       L+ +A   L      A     +  G A  +   +  +P+   RG+L    
Sbjct: 124 WSYLEATGGGLMFVAARCLGDRDGRA----ARALGKASGLAAYLRAVPVLEARGKLPL-- 177

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                             +D    A++  A  GL  + +AR     +      A +   +
Sbjct: 178 ------------------ADGRPEAVRALAAHGLDLVAEARAAQGAVPRAARAALMAGVL 219

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            E +L+ A     ++   +  P++    W  L + +  R
Sbjct: 220 AEPMLRRAVADPGRVKDGTLLPSEAKVRWTRLRAGLTGR 258


>gi|159044244|ref|YP_001533038.1| hypothetical protein Dshi_1695 [Dinoroseobacter shibae DFL 12]
 gi|157912004|gb|ABV93437.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 256

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 97/280 (34%), Gaps = 25/280 (8%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+LA + +P   R  L  LY F+ E+ R       P+  +MRLQW
Sbjct: 2   SLEACAGLVERGDPDRFLATMAAPVPARRVLFPLYAFNIEVSRAPWLTEEPMIAEMRLQW 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D+ E   +          +  L  ++            ++ A  ++ Y D   D   F
Sbjct: 62  WRDVLEEI-RSGARVRSHEVATPLAEVLDA--EAVAVLDRLVAARRWEVYRDPFEDQAAF 118

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y     + L+  A         +A+  V++  G A  + + +  +P    RG++    
Sbjct: 119 DAYLEETGAGLVWAAGRA--LGAEAAAEPVLREQGWAAALARYLQAVPDLEARGRIPLV- 175

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D  + A+   A  GL  L +AR     +      A      
Sbjct: 176 -------------------DGRAEAVAELARRGLARLAEARGARGMVPVAARAALFAGWQ 216

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            E++L+ A      + +     ++  +   +   S   R+
Sbjct: 217 AETILRQATEAPGLVAAGGLGLSEFAKRARLAWVSATGRW 256


>gi|41409169|ref|NP_962005.1| hypothetical protein MAP3071 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41397989|gb|AAS05619.1| hypothetical protein MAP_3071 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 243

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 72/235 (30%), Gaps = 13/235 (5%)

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           R  RLQ   +   S        +  P    +    R+Y + +Q F D + +   D     
Sbjct: 2   RARRLQRLSERLFSGGAH----ADDPLVAAVTHTARRYRISSQLFADFLASMRMDLTVTD 57

Query: 133 IFDCKQFEHYAFRISSRLIHLATMI-LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
             D +    Y    +  +      I         +       G A  +   +  +     
Sbjct: 58  YPDREALNRYMRGSAEAIGLQVLPILGTVTPVDEAAPYAAALGRAFQLTNFLRDVDEDLA 117

Query: 192 RGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           RG++Y P D L A G+DRE  +      +   R+  A+     +  +    A   +  + 
Sbjct: 118 RGRVYLPADELAADGVDRELLMWCHEHRRTDPRVRRALIAQHHIARQTYRFATAGIAVLQ 177

Query: 248 PDVFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP---WYMLSSSIKKR 298
               P      ++   +L   +   F +  H  T     R       L  S + R
Sbjct: 178 HRSRPCVAAAAALYSEILDCIEKSDFAVFDHRATVGTARRLRVGAVGLIRSWRAR 232


>gi|83858669|ref|ZP_00952191.1| hypothetical protein OA2633_04181 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853492|gb|EAP91344.1| hypothetical protein OA2633_04181 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 281

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/275 (18%), Positives = 92/275 (33%), Gaps = 4/275 (1%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            L   D +R +A L +P   R  L  LY ++ E+ ++ D    P+  +MRL W ++    
Sbjct: 7   LLAANDPERRMAALFAPAELRARLYALYAYYHEIAQIPDKVSEPVIGEMRLAWAREATAD 66

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLD-MIEAHFFDSYNDSIFDCKQFEHYAFR 145
                           L  +      P++  L  ++EA   D         +    Y  R
Sbjct: 67  LFAAPPKVRRHDVYEALSELREAPGAPDEAALVGLVEARSADLGEGPFPTREDRRDYVDR 126

Query: 146 ISSRLIHLATMILDSERY--SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            S+ L+ +A  +L  +      +   I+ AG       L+         G+  +  D L 
Sbjct: 127 TSAALMRIAARLLKPDLDLGGEAGAAIQAAGRLWGFAGLLRAFAPLVQAGRPPYSADELA 186

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESV 263
              +      +G+  +    A+        +           +  +VFPA    S+    
Sbjct: 187 GADMSEADLRAGRKPEVARAALSGLITEAQEAAGMLSRTRSALPAEVFPAVGYASLARGY 246

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           LK AQ  G            L +   +  +S+  R
Sbjct: 247 LKSAQGLG-DPFREQIARAPLGQNARLTWASLTGR 280


>gi|297560286|ref|YP_003679260.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844734|gb|ADH66754.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 564

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 74/274 (27%), Gaps = 4/274 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +R      R     D+       L P   R     L  F     R+ D           
Sbjct: 21  LARAFEVCRRIHTGADHVSPRVVDLLPAHKRPYAHALVAFGIWADRLADEGEVSERGPAL 80

Query: 77  LQWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS-IF 134
            ++  +   +   G  A   + P    +   VR +D+P     +++     DS       
Sbjct: 81  ARFRAETLAALADGPGAPVRLPPVQRAMAHTVRAWDMPVPVLEELLTTLEQDSRRTPDFP 140

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                  Y   +S  +  L   +L       +  ++   G       ++  LP    +G+
Sbjct: 141 GFADLRGYLRGMSGTVAELLGTVL-EPVREDTPELMSLLGEVLQYIDILTDLPEDLEQGR 199

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            Y P   L   GLD +       +D     I +        L + +E +  + P   P  
Sbjct: 200 CYLPRQDLERFGLDADGLNGALGTDACRELIALQVRRARGLLDRGQEVVDAVHPSSRPFL 259

Query: 255 IPVSITESV-LKHAQNHGFKIVSHSHTPNQLVRP 287
             +       L   +                 R 
Sbjct: 260 ASLLAGLRTGLDECEYLPANRPDAPPRTAVPARL 293


>gi|22298640|ref|NP_681887.1| farnesyl-diphosphate farnesyltransferase [Thermosynechococcus
           elongatus BP-1]
 gi|22294820|dbj|BAC08649.1| farnesyl-diphosphate farnesyltransferase [Thermosynechococcus
           elongatus BP-1]
          Length = 359

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 81/286 (28%), Gaps = 35/286 (12%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 F    L  +     L+    P     ++   Y        V D     I     
Sbjct: 20  VKDAECFCQEILPQVSRTFALSIRFLPGNLGRAVLVAYLICRIADTVEDDPVASIAAKTA 79

Query: 77  LQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLP---------NQYF 117
           L              + +  + +G+  E      V+   IV                ++ 
Sbjct: 80  LLDHLLQCFDSPALANSYGETARGVQGEPAHVQLVKHTGIVFTLYRSLPRTSQQHVQRWV 139

Query: 118 LDMIEAHFF----DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE-------RYSAS 166
            +M+               I    +++ Y + ++  + +L T +            Y   
Sbjct: 140 SEMVHGMKKFINLYPNGIRIQTLAEYKEYCYYVAGTVGYLLTDLWHEHSPSIGADEYQVL 199

Query: 167 LRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           L+     G A     ++  +     H   +Y P + L   G   ++ LS ++  +   AI
Sbjct: 200 LKRCAAFGEALQTVNILKDIAWDAEHENSIYIPNESLILQGSSHQTLLSAEHLQQNHAAI 259

Query: 226 KIFAELGLKYLFKAREEMRYILPDVFP----AFIPVSITESVLKHA 267
           K    L    L +A+  +  +     P      +P+    + L+  
Sbjct: 260 KELIALAWHDLDEAQAYLLSVPKAAIPIRLFCVLPLLFAYATLREL 305


>gi|328862356|gb|EGG11457.1| hypothetical protein MELLADRAFT_102433 [Melampsora larici-populina
           98AG31]
          Length = 419

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 101/330 (30%), Gaps = 37/330 (11%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
             K  R      +      L NLR  D+   L     P   R +   +   + EL+ + +
Sbjct: 89  FIKQQRNLSSKTNSPIDQCLENLRRSDHSSVLQIPFYPKDVRSAFVAIKALNLELLSIPN 148

Query: 66  TARN--PITRDMRLQWWKDIFESSTKGLI---AESISPFSVELLSIVRQYDLPNQYFLDM 120
           +  +   +   MR QWW+D   +  K      A    P  + L  +++++ L   +   +
Sbjct: 149 SISSGKTLIGQMRYQWWRDAINTCFKEDSESQAPINHPVILALHPVIKKHKLTKYHLNRL 208

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA-------SLRVIKYA 173
           I+A      N           ++   +  ++ L     +    +            + + 
Sbjct: 209 IDAREKSYLNPKFNTIDDLIKHSQSTNFSILSLLLQSCNLSSTTTTNLPLSKIDHALSHL 268

Query: 174 GIAQFIGQLICQLP--IHYHRGQLYFPLDIL-----GAVGLDRE-SFLSGQNSDRISLAI 225
                I  L+  LP            P+D++         +    + ++    +R+   I
Sbjct: 269 SNLLTISTLLHSLPSYYKSRSNLSILPIDLMICSEEELFKVAHSSNLINENILERVQQTI 328

Query: 226 KIFAELGLKYLFKAREEM-----------------RYILPDVFPAFIPVSITESVLKHAQ 268
               +L    L   R  +                  Y+ P + P F+  +  ++ L   +
Sbjct: 329 MRIFDLASSELNACRATLMDQEHHHSNLINQTLSPTYLDPSIRPLFLSATPAKTYLNRLE 388

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              F     S        P+ + S S   +
Sbjct: 389 KLNFDAFHPSLQSRDWKLPFQIWSDSFFGK 418


>gi|281211629|gb|EFA85791.1| UPF0551 family protein [Polysphondylium pallidum PN500]
          Length = 394

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 95/266 (35%), Gaps = 9/266 (3%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYF-HTELMRVRDTA-RNPITRDMR 76
            D  +V + ++  D + Y+  +L         +F     + E + +      +      +
Sbjct: 130 EDYNYVFQRVKQFDRENYVCSILISDELARRAAFAIRAFNIETVILHSEVKSDIRLAKYK 189

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L +WKD   +   G + +   P    L   +++  L   +F+ ++     D  +  + D 
Sbjct: 190 LSFWKDAINNIYNGKVYD--QPLIRVLAQQIKERGLSKTWFIRLLNRREKDLNSVQMKDM 247

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            + E YA  I   L+ L    L      A      + G A  I  LI   P H    ++Y
Sbjct: 248 DELEAYAEEIHGSLLLLNLESLGVRNSDA-EHAASHLGRAMGIMTLIRGTPFHIKTRKIY 306

Query: 197 FPLDILGAVGLDRESFLSGQNSD--RISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            P  +    G+  E    G++    ++  AI   A +   +L KAR     +      AF
Sbjct: 307 IPASLTTKYGIVTERLYQGEDEQVLKLKEAIFEMASVAKIHLEKARSF--KVPAPAHEAF 364

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHT 280
           +     +  L+  +   F I   +  
Sbjct: 365 LCAEFADDFLERLRKSDFNIFDPTLR 390


>gi|328701641|ref|XP_003241668.1| PREDICTED: bifunctional enzyme CarRP-like [Acyrthosiphon pisum]
          Length = 599

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/328 (9%), Positives = 86/328 (26%), Gaps = 44/328 (13%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           +      +      I + D    +  +         A  L P   R+ L  LY F     
Sbjct: 262 LFSAFATSEYNMPHIVTEDIKESIEIITVASKSFTTASFLFPAGIRLDLIILYSFCRVTD 321

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGLIA-----------------------ESISP 98
            + D   +   +  + +  +   +       +                       +    
Sbjct: 322 DMIDDELDVEKKKRKFELTERFIKELFHDRKSDYDVQTKPQELKIDWTKYESELTDREMS 381

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
               L  I   + LP + F +++  + +D     I +      Y+  ++  +  L   ++
Sbjct: 382 CFRALSRI--AFYLPRKPFDELLAGYKWDIEGRLIRNEDDLLLYSTYVAGSVGALCVYVM 439

Query: 159 DSERYSASLRVIKYA----------GIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVG- 206
                +    +++            G A  +  +   +       G+ Y P + +     
Sbjct: 440 MYRCDNDKYDLVENYDYVIEKAYQMGRALQLVNIARDIVTDSETLGRCYVPTEYMDDEEE 499

Query: 207 ----LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP-VSITE 261
               L  E         ++         L  K   ++ + +R +      + +    I  
Sbjct: 500 EIRILCHEKQPRSLGDKKLKKYSTRLIHLANKQQLESLDAIRCLPHVTRGSVLATTDIYR 559

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
            ++    +          + ++  +   
Sbjct: 560 GLVSAILSSP--TYPARASLSKTKKILI 585


>gi|163736515|ref|ZP_02143934.1| hypothetical protein RGBS107_15326 [Phaeobacter gallaeciensis
           BS107]
 gi|161390385|gb|EDQ14735.1| hypothetical protein RGBS107_15326 [Phaeobacter gallaeciensis
           BS107]
          Length = 259

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 99/286 (34%), Gaps = 27/286 (9%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
              F  D +     ++  D DR+   + SP   R +L  +Y F+ EL R    +   +  
Sbjct: 1   MTTFDDDLIACADLVQKGDPDRFATVMASPVSTRAALFAIYAFNLELARAPWASTEAMIA 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +MR+QWW+D+      G         +  L  ++R       +   M EA  +D Y D  
Sbjct: 61  EMRVQWWRDVGAEIAAGGPV-RRHFVATPLAKVLR--PDLAVHIDAMAEARRWDIYRDPF 117

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D      +  + +  L+ +A     +   +   R+++       +   +  +P      
Sbjct: 118 EDEAALADHIDKTTGSLMWMAA----ATLGARDERLVRRFAYGVGVANWLRAIPKLVAEK 173

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++                       D     ++  A+ GL  L +AR     +     PA
Sbjct: 174 RVPLL--------------------DGTPEGVRALAQDGLAALKEARANRGAMAASSLPA 213

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +P    + +L+ A     ++   +   ++  R   ++      R+
Sbjct: 214 LLPGWQADKILQQAVAAPQRVADGTLGTSEFRRRTSLIYRVSTGRW 259


>gi|330991438|ref|ZP_08315389.1| hypothetical protein SXCC_01343 [Gluconacetobacter sp. SXCC-1]
 gi|329761457|gb|EGG77950.1| hypothetical protein SXCC_01343 [Gluconacetobacter sp. SXCC-1]
          Length = 287

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 75/259 (28%), Gaps = 11/259 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +  LL     R  +   Y F   +  + DT R +   +  RL   +D+    T
Sbjct: 20  AGDENFPVGSLLISRRLRPYVHAYYDFARVIDDIVDTDRLDAQQKIARLDAMEDVV-LGT 78

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +G      +  +V +  ++ +  +P     D+I A   D+  +     ++ E Y    ++
Sbjct: 79  RGAPDRRDAQTAVRVGRMLARTGVPVSTATDLIVAFRQDAVKNRYDSWEELEEYCRYSAN 138

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +   +  +           A  +   +           + Y P   L   G+
Sbjct: 139 PVGRFLLELHGEDPKTFGA--SDALCTALQVLNHLQDCADDLRNLDRCYLPRPWLEREGV 196

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSIT---ESVL 264
             +          +        +   +    A   +  ++ D         I      + 
Sbjct: 197 TVDDLRRLYAVPGLRRVFAALLDRVDELNRHA-ALLPRMIRDRRMRMEAAVIVGLSRRLA 255

Query: 265 KHAQNHGFKIVSHSHTPNQ 283
              +      V+     ++
Sbjct: 256 ARLREE--DPVAGRVRLSR 272


>gi|40809755|dbj|BAD07286.1| phytoene synthase [Citrus limon]
          Length = 154

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 53/154 (34%), Gaps = 6/154 (3%)

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGI 175
           IE    D       +  +   Y + ++  +  ++  ++           +        GI
Sbjct: 1   IEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGI 60

Query: 176 AQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKY 235
           A  +  ++  +     RG++Y P D L   GL  +   +G+ +++    +K   +    +
Sbjct: 61  ANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMF 120

Query: 236 LFKAREEMRYILPDVF-PAFIPVSITESVLKHAQ 268
              A   +  +      P +  + +   +L   +
Sbjct: 121 FDMAENGVTELSEASRWPVWASLLLYRQILDEIE 154


>gi|57282088|emb|CAD29284.1| putative phytoene synthase [Oryza sativa]
          Length = 130

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 44/120 (36%), Gaps = 1/120 (0%)

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             GIA  +  ++  +     RG++Y P D L   GL  E   +G  +++    +K   + 
Sbjct: 9   ALGIANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKR 68

Query: 232 GLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
              +  +A   +  +      P +  + +   +L   + + +   +      +  +   +
Sbjct: 69  ARMFFEEAERGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKLLAL 128


>gi|34922667|sp|Q9UUQ6|LCPS_RHIRA RecName: Full=Bifunctional enzyme CarRP; Includes: RecName:
           Full=Lycopene cyclase; Includes: RecName: Full=Phytoene
           synthase
 gi|6318233|emb|CAB60272.1| lycopene cyclase/phytoene synthase [Mucor circinelloides f.
           lusitanicus]
          Length = 614

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 78/275 (28%), Gaps = 26/275 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQ 78
           D       LR      Y A  + P   R  L  LY F      + D  + P  TR  +L 
Sbjct: 288 DLSVSWDILRKASKSFYTASAVFPGDVRQELGVLYAFCRATDDLCDNEQVPVQTRKEQLI 347

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVR-------------QYDLPNQYFLDMIEAHF 125
                         +   +         +              ++ L      ++++ + 
Sbjct: 348 LTHQFVSDLFGQKTSAPTAIDWDFYNDQLPASCISAFKSFTRLRHVLEAGAIKELLDGYK 407

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL--------DSERYSASLRVIKYAGIAQ 177
           +D    SI D +   +Y+  ++S +  + T I+          ++    ++  +  G+  
Sbjct: 408 WDLERRSIRDQEDLRYYSACVASSVGEMCTRIILAHADKPASRQQTQWIIQRAREMGLVL 467

Query: 178 FIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRES--FLSGQNSDRISLAIKIFAELGLK 234
               +   +       G+ Y P D L    +             +R+            +
Sbjct: 468 QYTNIARDIVTDSEELGRCYLPQDWLTEKEVALIQGGLAREIGEERLLSLSHRLIYQADE 527

Query: 235 YLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQ 268
            +  A + +  +            ++  S+    +
Sbjct: 528 LMVVANKGIDKLPSHCQGGVRAACNVYASIGTKLK 562


>gi|145294796|ref|YP_001137617.1| hypothetical protein cgR_0743 [Corynebacterium glutamicum R]
 gi|14517653|gb|AAK64298.1|AF159510_3 phytoene synthase [Corynebacterium glutamicum]
 gi|140844716|dbj|BAF53715.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 304

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 72/293 (24%), Gaps = 32/293 (10%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITR 73
             S    + + +      L+  L  P  R  +  LY        + D        +    
Sbjct: 20  ASSKASHKVIEEYSTSFSLSTWLLSPRIRNDIRNLYAVVRIADEIVDGTAHAAGCSTTKI 79

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +  L  ++             +            R+ D   ++ +    +   D   ++ 
Sbjct: 80  EEILDAYE--IAVLAAPQQRFNTDLILQAYGETARRCDFDQEHVVAFFASMRKDLKANTH 137

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERY------SASLRVIKYAGIAQFIGQLICQLP 187
            D   F  Y +  +  +  L   + +  R           +  +  G A      +  L 
Sbjct: 138 -DPDSFTTYVYGSAEVIGLLCLSVFNQGRTISKKRLEIMQKGARSLGAAFQKINFLRDLA 196

Query: 188 IHYHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                 G+ YFP                G  +               + L  A E    I
Sbjct: 197 DDQQNLGRFYFP------------DTNQGTLTKEQKE---DLIADIRQDLAMAHEAFPEI 241

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKK 297
                        + + +    +      ++         ++   + S+++K 
Sbjct: 242 PVQARIGVISAYLLFQKLTDQIEATPTSDLLRERIRVPLHIKLSILASATMKG 294


>gi|154293538|ref|XP_001547286.1| hypothetical protein BC1G_13908 [Botryotinia fuckeliana B05.10]
 gi|150845289|gb|EDN20482.1| hypothetical protein BC1G_13908 [Botryotinia fuckeliana B05.10]
          Length = 250

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 68/282 (24%), Gaps = 65/282 (23%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
           +  LR      YLA  +     RI L  LY F      V D   +               
Sbjct: 25  VELLRQKSRSFYLASSVFHGRLRIDLILLYSFCR----VADDLVD--------------- 65

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
                                                +A+      + I     +     
Sbjct: 66  -------------------------------------DANTDSEAREWIAKLTHYLDLVR 88

Query: 145 RISSRLIHLATMILDSERYSASLRVIKY--------AGIAQFIGQLICQLPIHYHRGQLY 196
           R++  +  +   +      +  L   +          GIA     +   +      G++Y
Sbjct: 89  RVAGTVAEMCLELAFYHTSAVVLSHRRDELIRAGARMGIALQYINICRDVATDAAIGRVY 148

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
            P   L   GL  +  +       I          G     +AR  +  +  D   +   
Sbjct: 149 LPSSWLEEEGLQPQHIVENPTGPIIDKLRGRLLNKGFAIYQEARPAIEQVPEDARVSMRV 208

Query: 257 VS-ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                  + +  + + +K+     T  +L R      +  + 
Sbjct: 209 AVESYVEIGRVLKENEYKVAQGRATVPKLRRIGVAWKALRQG 250


>gi|320587514|gb|EFW99994.1| hypothetical protein CMQ_312 [Grosmannia clavigera kw1407]
          Length = 369

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 57/344 (16%), Positives = 102/344 (29%), Gaps = 68/344 (19%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            ++  L+    L+  D+D +L     P   R     L   + EL R+ +T  NP  R MR
Sbjct: 31  VAKARLYCENQLKTSDHDAHLVHYFLPGAARDVYLALRTLNLELARLPETVTNPTIRLMR 90

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIV----------RQYDLPNQYFLDMIEAHFF 126
           LQ+W+D   ++  G       P S+ L + +            +     +    I +   
Sbjct: 91  LQFWRDAVNNTFDGHP--PREPVSLMLYAALAALAARDQKGASWSSIKFWLQRYINSRQE 148

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
              N         E YA    + L+++   +L  +       +  + G A  I  ++  +
Sbjct: 149 HMDNRPFPHMAALEDYAESTYATLMYITLAMLPLQSMH-VDHLASHVGKAYGIAAILRSI 207

Query: 187 PIH--------------YHRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAEL 231
           P+                    L  PLD++  V L  E     G  +  +  A+   A  
Sbjct: 208 PVLAAPAAPKSTAAAAAARTPVLLLPLDVMADVDLREEDVYRQGPGAPGLQEAVFRVATR 267

Query: 232 GLKYLFKAREEMRYIL-------------------------------------PDVFPAF 254
              +L  ARE ++ I                                         F   
Sbjct: 268 ANDHLITAREMVKNIRAGEDPGHDYEHAGETGHTYHDARKDRQDGGREGIQALKRGFGVL 327

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           +     +  L   +   F         +    PW +  +    R
Sbjct: 328 LEAVPAQDFLARIEAADFDPFRVK---SSWKLPWSLYWAQKTHR 368


>gi|297172092|gb|ADI23074.1| phytoene/squalene synthetase [uncultured gamma proteobacterium
           HF0770_07M15]
          Length = 333

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 79/310 (25%), Gaps = 37/310 (11%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            LRD+    YL   + P   R  +   Y        + D     P  R   LQ ++    
Sbjct: 14  ILRDVSRAFYLTLRVLPAAVRPQIGLAYLLARITDTIADTDLVPPADRLQTLQQFRARIR 73

Query: 86  SSTKGLIAESI------SPFSVELLSIVRQY--------DLPNQYFLDMIEAHFFDSYN- 130
                 +  S       +P   +LL    +                  ++E         
Sbjct: 74  DDAAPPVDFSRLAKEQENPAEAKLLLRSSEALELLDQLTPSDRGQVQIVLETITRGQEQD 133

Query: 131 ----------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS-------ASLRVIKYA 173
                      ++      + Y +R++  +    T +  +  +        A +      
Sbjct: 134 LERFGDGSTLTALQTADDLDDYTYRVAGCVGEFWTRLTRTHCFPNAQLDNTAFVADAIRF 193

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGL 233
           G    +  ++  LP     G+ Y P   L   GL  E      N  ++    + +     
Sbjct: 194 GKGLQLVNILRDLPRDLANGRCYLPAVDLAMAGLQPEDLRDPANWPKLQPVFEPWLTRAR 253

Query: 234 KYLFKAREEMRYIL----PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
            +L         I             P+ I  + L   +             ++      
Sbjct: 254 DHLTAGGRYTLAIPHTHYRLRLACAWPILIGTATLDRVRAANPLQPEPRLKISRSAARGI 313

Query: 290 MLSSSIKKRF 299
           +  +  +  F
Sbjct: 314 VCRTLWRVPF 323


>gi|220910176|ref|YP_002485487.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7425]
 gi|219866787|gb|ACL47126.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7425]
          Length = 360

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 76/291 (26%), Gaps = 55/291 (18%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP----------- 70
            F    L ++     L+    P     ++   Y        + D                
Sbjct: 18  RFCQEILPEVSRTFALSIRFLPGNLGRAVLCAYLLCRIADTIEDDPVATVETKIFLLDLL 77

Query: 71  ----------------------ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR 108
                                     +RL    D+  +  + L   +       +  +V 
Sbjct: 78  LDCFDSPVDANAYPKEAENVQGEAAHLRLVQHTDLVFALFRTLPPSTQHHVYRWVSEMVH 137

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE------- 161
                      M +          I    +++ Y + ++  + +L T +           
Sbjct: 138 ----------GMKKFVALHPQGIRIQTLPEYKEYCYYVAGTVGYLLTDLWHEHSPSIGDG 187

Query: 162 RYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDR 220
            Y   L+     G A     ++  +     H   +Y P   L   G   +  LS  +  +
Sbjct: 188 EYKVLLQRCAAFGEALQTVNILKDIAWDAEHENSIYVPQKSLLEQGSSHQLLLSPAHLGQ 247

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPDVFP----AFIPVSITESVLKHA 267
              AIK   +L    L +A E +  I     P      +P+    + L+  
Sbjct: 248 NHAAIKELVQLAWNDLDEALEYLLSIPKAAVPIRMFCVLPLLFAYATLREL 298


>gi|77463277|ref|YP_352781.1| phytoene/squalene synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|77387695|gb|ABA78880.1| Probable Phytoene/squalene synthetase [Rhodobacter sphaeroides
           2.4.1]
          Length = 255

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 101/279 (36%), Gaps = 26/279 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+ A + +PP  R  L  LY F+ E+ R     R P+  +MRLQ+
Sbjct: 2   SLEACAALVERGDPDRHAAAMAAPPAARARLWPLYAFNLEVARAPWVTREPMIAEMRLQF 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D+ E              +  L  ++R+  LP      MIEA   D + +   D   F
Sbjct: 62  WRDVVEE--APAGRSRAHEVAGPLAGLIREAALPVPLLEAMIEARRHDIWAEPFADEAAF 119

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             +    ++    +    L     +A+   ++  G A  +   +  +P    RG+   P 
Sbjct: 120 TAHLEATAA--GLMWASALALGAPAAAETAVRAVGWAAGLAAWLQAVPELEARGRQPLP- 176

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D    A+   A  GL  L   R     +  D  PA +P   
Sbjct: 177 -------------------DGRPEAVVALARAGLSRLESGRRV--RLPRDARPALLPAWQ 215

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             ++L+ A +   ++ +     ++  R   +L ++   R
Sbjct: 216 AGALLRLAVDEPGRVAAGRLQLSEFARRGRLLRAAFTGR 254


>gi|40809723|dbj|BAD07270.1| phytoene synthase [Citrus unshiu]
 gi|40809739|dbj|BAD07278.1| phytoene synthase [Citrus sinensis]
          Length = 154

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 52/154 (33%), Gaps = 6/154 (3%)

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGI 175
           IE    D       +  +   Y + ++  +  ++  ++           +        GI
Sbjct: 1   IEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGI 60

Query: 176 AQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKY 235
           A  +  ++  +     RG++Y P D L   GL  +   +G+ + +    +K   +    +
Sbjct: 61  ANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFAGEVTIKWRNFMKNQIKRARMF 120

Query: 236 LFKAREEMRYILPDVF-PAFIPVSITESVLKHAQ 268
              A   +  +      P +  + +   +L   +
Sbjct: 121 FDMAENGVTELSEASRWPVWASLLLYRQILDEIE 154


>gi|302891803|ref|XP_003044783.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256725708|gb|EEU39070.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 466

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 98/328 (29%), Gaps = 60/328 (18%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
              ++ T   +        +    L   DYD +L     P   + + + L   + EL+R+
Sbjct: 17  ARTSRRTYITDADVESARRYCYTQL--HDYDAHLIRRFVPSPVQDTYAALRTLNLELVRL 74

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLP---------N 114
            +   NP    +R+++W++  +++  G       P  + L   ++  +            
Sbjct: 75  PELVSNPTIGTLRMKFWQESIDNTFAGRP--PREPICILLHKSLQDLEARAGTATKKSIK 132

Query: 115 QYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAG 174
            +   ++        N         E YA    S L++ AT+     R      +  + G
Sbjct: 133 FWVSRLVRTREKHMSNRPFGSLASLEEYAENTYSTLMY-ATLASLPLRSMNVDHLASHIG 191

Query: 175 IAQFIGQLICQLPIHY----------------HRGQLYFPLDILGAVGLDRESFLS-GQN 217
            A  I  ++  +P+                      L  PLD +   G+  E     G N
Sbjct: 192 KACGIVAVLRGIPVLAAPPSPVNTPSGQAPSSREPALLLPLDAMAEAGVKEEEVFRQGPN 251

Query: 218 SDRISLAIKIFAELGLKYLFKAREEMRYIL-----------------------------P 248
           +  +  A+   A     +L  ARE ++ +                               
Sbjct: 252 APGLQDAVFQVATRANDHLITAREMLKRLKAGEDPGHEFEHHGEGEHFYEEESDTIKEIR 311

Query: 249 DVFPAFIPVSITESVLKHAQNHGFKIVS 276
             F   +        L+  +   F   +
Sbjct: 312 QGFGVLLEAIPAAQYLQRLEQADFDPFT 339


>gi|329114903|ref|ZP_08243659.1| Hypothetical protein APO_1704 [Acetobacter pomorum DM001]
 gi|326695800|gb|EGE47485.1| Hypothetical protein APO_1704 [Acetobacter pomorum DM001]
          Length = 286

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 76/256 (29%), Gaps = 9/256 (3%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFESSTKG 90
           D +  +  LL     R  +   Y +   +  + D     P  +  RL   +++     + 
Sbjct: 21  DENFPVGSLLISKKLRPHVHAYYDYARVIDDIADSETLAPDDKITRLNAMEEVLLGK-RD 79

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
            I    +  +  L   + Q  +P +   D++ A   DS             Y    ++ +
Sbjct: 80  PINRPDAQSAATLRRSLLQTHVPFETATDLLIAFRNDSRGHVYQTWDDLLQYCRYSANPV 139

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDR 209
                +I   E  SA+         +  I   +        R  + Y P D++   G  +
Sbjct: 140 GR--YLIGLHEESSAAFAPSDALCTSLQILNHLQDCSGDLKRLKRCYIPADMMQRCGTSQ 197

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS--ITESVLKHA 267
           +  L+G  S  +        +       +A     +I    F         +   + +  
Sbjct: 198 QDLLAGSTSPALRRVFNTMLDGVDALNQQASALAAHIRDRRFRMECAAIVELAHCLTRRL 257

Query: 268 QNHGFKIVSHSHTPNQ 283
           +      ++      +
Sbjct: 258 RRE--DPLAGRVALRR 271


>gi|75676457|ref|YP_318878.1| squalene/phytoene synthase [Nitrobacter winogradskyi Nb-255]
 gi|74421327|gb|ABA05526.1| squalene/phytoene synthase [Nitrobacter winogradskyi Nb-255]
          Length = 292

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 75/263 (28%), Gaps = 16/263 (6%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P +R  +   Y F      + D A      +   L  ++       
Sbjct: 13  HRDENFPVASRLIHPRHRALILAFYNFVRTADDIADHAELGEKDKLAWLDLFESEL---- 68

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
             L      P +V L   + Q  +P ++ +D+++A   D              Y    + 
Sbjct: 69  --LGQGDSQPEAVNLRKALAQRSMPPRHAIDVLKAFRMDVTKLRYETWDDVIDYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +      + +            I   +      Y    ++Y P D L A G+
Sbjct: 127 PVGRFMLDVHGESMSTWTA--SDALCAGLQINNHLQDCAKDYRNLNRVYLPRDALAASGV 184

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVL 264
             E     ++S  +   +   A      L + R     I  D         I    + ++
Sbjct: 185 SVEMLGEDKSSPALLQCLHALAGRTEVLLDEGRPLAGEI-RDTRLGLEVGVIQMFADKIV 243

Query: 265 KHAQNHGFKIVSHSHTPNQLVRP 287
              +      +S +     L   
Sbjct: 244 ALLKAR--DPLSETVHLKPLQLL 264


>gi|119094188|gb|ABL61010.1| phytoene synthase CrtB [uncultured marine bacterium HF10_25F10]
          Length = 305

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 86/285 (30%), Gaps = 18/285 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S + L   ++L       + A            + LY F   L  + D   +      R
Sbjct: 1   MSNEELTSEKSLAANGKSFHWARRFLGQRMGSDAASLYAFCRLLDDMADG--DIQNGPTR 58

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA-HFFDSYNDSIFD 135
           L   +    +  +G       P  +  L ++R+   P    + +I+      +   ++ D
Sbjct: 59  LAAIRADLIAGREG-----ADPAFLAFLPLMREKRFPTDVLVALIDGLLEDQAEEVALAD 113

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
                 YA+R++  +  L   +LD +  +A    I   GIA  +  +   +       + 
Sbjct: 114 EAALLRYAYRVAGTVGLLMCHVLDCQAPAARAHAID-LGIAMQLTNIARDILEDAGMNRR 172

Query: 196 YFPLDILGAVGLDRESFLSGQNSDR------ISLAIKIFAELGLKYLFKAREEMRYILPD 249
           Y P D +G          +   S        ++ A     +L   +        RY+   
Sbjct: 173 YVPGDWVGHA--SPHEIRAAARSPESMLARDVTAAAGRLLDLAETFYASGARGYRYLPWR 230

Query: 250 VFPAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
              A  +   +   +    +       +      +  +    L +
Sbjct: 231 AHLAIGVAARVYRQIGIQLRGANLAWHAGRQVTGKAAKLRCSLLA 275


>gi|164656915|ref|XP_001729584.1| hypothetical protein MGL_3128 [Malassezia globosa CBS 7966]
 gi|159103477|gb|EDP42370.1| hypothetical protein MGL_3128 [Malassezia globosa CBS 7966]
          Length = 364

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 102/324 (31%), Gaps = 53/324 (16%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
           +  +R  DY  YL  +      +     L  F  EL  ++DT  N +   +R+QWW+D  
Sbjct: 43  VDTVRQRDYAAYLTHVAYARRVQPHFWALRAFQVELATIKDTVSNELVGRIRMQWWRDAI 102

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLP------NQYFLDMIEAHFFDSYND-SIFDCK 137
           ES   G       P +  L   +    +         +FL +I+A   D  +  S    +
Sbjct: 103 ESIYAGRP--PKHPIAQGLYEAISDPAVMAHGSLVKDHFLRIIDAREADLADPLSPPTLE 160

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-------- 189
           + E YA   SSR +    + L          +  + G A  +   +  LP H        
Sbjct: 161 ELEKYAEATSSR-MLYLLLNLQGLSEPTVDVLFSHLGKAIGLTIFVASLPYHTHPAPRPA 219

Query: 190 -----------------------------YHRGQLYFPLDILGAVGLDRESFLS-GQNSD 219
                                             L  PL+ +   G+ +E     G  + 
Sbjct: 220 SAAAASSPHSSVGAAIGGTTRYAPQAGGVPRTPTLPLPLEYILEAGVTQEDVFRHGPGAR 279

Query: 220 RISLAIKIFAELGLKYLFKAREEMR-----YILPDVFPAFIPVSITESVLKHAQNHGFKI 274
            +  A+   A     YL  AR  +R      +        +        L+  +   F  
Sbjct: 280 GLKDAVFYTATRANDYLITARRVIREELGGRVPALATGPMLLAVQPRQFLRKLERVDFNP 339

Query: 275 VSHSHTPNQLVRPWYMLSSSIKKR 298
              +      + PW+M  ++ ++ 
Sbjct: 340 YDPTLAKRDWLLPWHMWIAARRQT 363


>gi|219964678|gb|ACL68403.1| squalene/phytoene synthase [Streptomyces peucetius ATCC 27952]
          Length = 266

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 56/220 (25%), Gaps = 16/220 (7%)

Query: 51  SFLYYFHTELMRVRDTARNPITRDMR---------------LQWWKDIFESSTKGLIAES 95
             +Y +   +  + D    P   D R               L  ++           A  
Sbjct: 1   MAVYGYARLVDDIGDGDLAPGGADARHLGVAPELADDRLALLDAFEADLRRVFDASGAAP 60

Query: 96  ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
             P    L   VR+  L  + FL +I A+  D              Y    ++ +  L  
Sbjct: 61  HHPLLHALRPTVRRCSLTPEPFLGLIAANRQDQLVRRYQTYDDLLAYCELSANPVGRLVL 120

Query: 156 MILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSG 215
            I  +                  I + +  +     R ++Y P + +    +      + 
Sbjct: 121 GITGTTTPERVR-RSDAICTGLQIVEHLQDVAEDLARDRIYLPAESMKRFHVAEADLAAP 179

Query: 216 QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
             +  +   +   A      L +    +  +   +     
Sbjct: 180 TANASVRALVAHEARRARALLDEGTPLVGSVEGRLRLLLA 219


>gi|39936804|ref|NP_949080.1| squalene/phytoene synthase [Rhodopseudomonas palustris CGA009]
 gi|192292630|ref|YP_001993235.1| squalene synthase HpnC [Rhodopseudomonas palustris TIE-1]
 gi|39650661|emb|CAE29184.1| possible phytoene synthase-related protein [Rhodopseudomonas
           palustris CGA009]
 gi|192286379|gb|ACF02760.1| squalene synthase HpnC [Rhodopseudomonas palustris TIE-1]
          Length = 292

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 73/260 (28%), Gaps = 14/260 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFESST 88
             D +  +A  +  P +R  +   Y F      + D    +  T+   L   +       
Sbjct: 13  HRDENFPVASWIIHPRHRDLILAFYNFVRTADDIADHEMLDGDTKLEYLDLLEAEL---- 68

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
             L      P +V L   + +  +P ++ LD++ A   D       D  +  HY    + 
Sbjct: 69  --LGRGETQPEAVHLRRALAERGMPPRHALDLLTAFRMDVTKLRYEDWDEVIHYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +      +              I   +      Y    ++Y P D+L A G 
Sbjct: 127 PVGRFMLDVHGESTTTWQA--SDALCAGLQINNHLQDCGKDYRTLNRVYLPRDVLDAAGA 184

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
             E     ++S  +   ++  A      L   R     I  D         I ++     
Sbjct: 185 KVEDLGLQKSSPALLKCLQGLAVRTASLLGDGRPLAAEI-KDYRLGLEVSVI-QAYADRI 242

Query: 268 QN--HGFKIVSHSHTPNQLV 285
                    +S       + 
Sbjct: 243 VRMLQTRDPLSERVHLKPIE 262


>gi|258541299|ref|YP_003186732.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632377|dbj|BAH98352.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635434|dbj|BAI01403.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638489|dbj|BAI04451.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641543|dbj|BAI07498.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644598|dbj|BAI10546.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647653|dbj|BAI13594.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650706|dbj|BAI16640.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653697|dbj|BAI19624.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-12]
          Length = 286

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 76/256 (29%), Gaps = 9/256 (3%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFESSTKG 90
           D +  +  LL     R  +   Y +   +  + D     P  +  RL   +++     + 
Sbjct: 21  DENFPVGSLLISKRLRPHVHAYYDYARVIDDIADSETLAPDDKITRLNAMEEVLLGK-RE 79

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
            I    +  +  L   + Q  +P +   D++ A   DS             Y    ++ +
Sbjct: 80  PINRPDAQSAATLRQSLLQTHVPFETATDLLIAFRDDSRGHVYQTWNDLLQYCRYSANPV 139

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDR 209
                +I   E  SA+         +  I   +        R  + Y P D++   G  +
Sbjct: 140 GR--YLIGLHEESSAAFAPSDALCTSLQILNHLQDCAGDLKRLKRCYIPADMMQRCGTSQ 197

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS--ITESVLKHA 267
           +  L+G  S  +        +       +A     +I    F         +   + +  
Sbjct: 198 DDLLAGSTSPAMRRVFNTMLDGVDALNQQASSLAAHIRDRRFRMECAAIVDLAHCLTRRL 257

Query: 268 QNHGFKIVSHSHTPNQ 283
           +      ++      +
Sbjct: 258 RRE--DPLAGRVALRR 271


>gi|7453011|emb|CAB86388.1| phytoene synthase/lycopene cyclase [Phycomyces blakesleeanus]
          Length = 602

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 80/297 (26%), Gaps = 26/297 (8%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQ 78
           D     R LR+     Y A  +     R  L  LY F      + D    +   R  +L+
Sbjct: 283 DLDATWRILREASASFYTASSVFSFEARQDLGVLYGFCRATDDLADNNDVSVPDRKKQLE 342

Query: 79  WWKDIFESSTKGLIAESI-----------SPFSVELLSIVR-QYDLPNQYFLDMIEAHFF 126
             +                            F     S  R +  L  +   ++++ + F
Sbjct: 343 LVRGFVRQMFDSKHGHPDIDWTQYSGSIPDSFIAAFRSFTRLRDVLEIKAVEELLDGYTF 402

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV-------IKYAGIAQFI 179
           D     + +     +Y+  ++S +  + T +L       +  +        +  G+A  +
Sbjct: 403 DLEQREVKNEDDLVYYSACVASSVGEMCTRVLMGSEPGGNRTMLKWTVERARDMGLALQL 462

Query: 180 GQLICQLPIHYHR-GQLYFPLDIL--GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +   +     + G+ Y P D L      L +         +R+               
Sbjct: 463 TNIARDIVTDSKQLGRSYVPRDWLTSQESALLKAGKARELGDERLRQIALKMVYTADDLN 522

Query: 237 FKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             A   + Y+ P          ++  ++                   +L R      
Sbjct: 523 LMASRAIDYLPPSSRCGVRAACNVYTAIGVSLHKANGYP--DRAHLTKLERMKVTFR 577


>gi|38234440|ref|NP_940207.1| putative phytoene synthase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200703|emb|CAE50399.1| Putative phytoene synthase [Corynebacterium diphtheriae]
          Length = 290

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/289 (10%), Positives = 65/289 (22%), Gaps = 33/289 (11%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRDMR 76
                 +        LA  L     R  +S LY        + D         P      
Sbjct: 17  KAAHEIISCYSTSFGLATKLLRGRIRTDISNLYAMVRIADEIVDGTAQMAGLEPNAVSQL 76

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L  ++                P         R+     ++      +   D +  +    
Sbjct: 77  LDDYEAAV--LAAPTQRFHADPILHAWALSARRCKFKTEHVQAFFTSMRNDLHKHNYE-A 133

Query: 137 KQFEHYAFRISSRLIHLA------TMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
            +F  Y +  +  +  +                +      +  G A      +  L    
Sbjct: 134 AEFNEYVYGSAEVIGLMCLDAFLVEQHPRPHERTMMEHGARSLGSAFQKINFLRDLEEDT 193

Query: 191 HR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           H  G+ YFP              L+G+ +D                L  A   +  +  D
Sbjct: 194 HVLGRNYFPQ-------------LTGELTDATKAL---LVADIRTDLAAAYRCIPLLPFD 237

Query: 250 VF-PAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIK 296
                     +  ++    Q     ++        +  +   +  +  +
Sbjct: 238 ARVGVQAAADLFTALTDRIQEASAVEVTHTRIRIPKAQKIAIITRAPWR 286


>gi|126462151|ref|YP_001043265.1| putative phytoene/squalene synthetase [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103815|gb|ABN76493.1| putative phytoene/squalene synthetase [Rhodobacter sphaeroides ATCC
           17029]
          Length = 255

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 101/279 (36%), Gaps = 26/279 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+ A + +PP  R  L  LY F+ E+ R     R P+  +MRLQ+
Sbjct: 2   SLEACAALVERGDPDRHAAAMAAPPAARARLWPLYAFNLEVARAPWVTREPMIAEMRLQF 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D+ E              +  L +++R+  LP      MIEA   D + +   D   F
Sbjct: 62  WRDVVEE--APEGRSRAHEVAGPLAALIREAALPVPLLEAMIEARRHDIWTEPFADEAAF 119

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             +    ++    +    L     + +   ++  G A  +   +  +P    RG+   P 
Sbjct: 120 GAHLDATAA--GLMWASALALGAPAEAETAMRAVGWAAGLAAWLQAVPELEARGRQPLP- 176

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D    A+   A  GL  L   R     +  +  PA +P   
Sbjct: 177 -------------------DGRPEAVVALARAGLARLESGRRV--RLPRNARPALLPAWQ 215

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             ++L+ A +   ++ +     ++  R   +L ++   R
Sbjct: 216 AGALLRLAADEPGRVAAGRLQLSEFARRGRLLRAAFTGR 254


>gi|48478607|ref|YP_024313.1| phytoene synthase [Picrophilus torridus DSM 9790]
 gi|48431255|gb|AAT44120.1| phytoene synthase [Picrophilus torridus DSM 9790]
          Length = 283

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 75/259 (28%), Gaps = 10/259 (3%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
              +      + +    P   R+ +S LY F        D+    +      +++    E
Sbjct: 16  EVFQKGSTTYFYSSRFFPLHIRLKVSRLYAFVRVADNFVDSVPQQVD-----KFYNFKNE 70

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
                    S      + + +     + + +    + A   D      +   +   Y + 
Sbjct: 71  YERALKRGFSDDIIINKFIDLKNDVGIDDSWVDAFLNAMESDINKKIYYTVPELLSYIYG 130

Query: 146 ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV 205
            +  +  +   ILD +  S      +  G A      I         G++Y PL+     
Sbjct: 131 SAEVIGLMMARILDLDNRS--YPYARMLGRAMQYLNFIRDFSEDLSMGRIYLPLEFTEIN 188

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPVSITESVL 264
               E+ +     +  +L I+    +   +  +A +  RYI    + P      +     
Sbjct: 189 DFSYENVIKNI--EAFNLFIRKNLNVYFSWNKQAAKGFRYIKYRYLVPIKTASDMYLWTG 246

Query: 265 KHAQNHGFKIVSHSHTPNQ 283
           K    +   +      P +
Sbjct: 247 KIIYRNPMIVYKSKVKPGK 265


>gi|8250520|emb|CAB93661.1| lycopene cyclase/phytoene synthase [Phycomyces blakesleeanus]
          Length = 602

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 81/297 (27%), Gaps = 26/297 (8%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQ 78
           D     R LR+     Y A  +     R  L  LY F      + D    +   R  +L+
Sbjct: 283 DLDATWRILREASASFYTASSVFSFEARQDLGVLYGFCRATDDLADNNDVSVPDRKKQLE 342

Query: 79  WWKDIFESSTKGLIAESI-----------SPFSVELLSIVR-QYDLPNQYFLDMIEAHFF 126
             +                            F     S  R +  L  +   ++++ + F
Sbjct: 343 LVRGFVRQMFDSKHGHPDIDWTQYSGSIPDSFIAAFRSFTRLRDVLEIKAVEELLDGYTF 402

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV-------IKYAGIAQFI 179
           D     + +     +Y+  ++S +  + T +L +     +  +        +  G+A  +
Sbjct: 403 DLEQREVKNEDDLVYYSACVASSVGEMCTRVLMASEPGGNRTMLKWTVERARDMGLALQL 462

Query: 180 GQLICQLPIHYHR-GQLYFPLDIL--GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +   +     + G+ Y P D L      L +         +R+               
Sbjct: 463 TNIARDIVTDSKQLGRSYVPRDWLTSQESALLKAGKARELGDERLRQIALKMVYTADDLN 522

Query: 237 FKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             A   + Y+ P          ++  ++                   +L R      
Sbjct: 523 LMASRAIDYLPPSSRCGVRAACNVYTAIGVSLHKANGYP--DRAHLTKLERMKVTFR 577


>gi|50543780|ref|XP_500056.1| YALI0A14388p [Yarrowia lipolytica]
 gi|49645921|emb|CAG83985.1| YALI0A14388p [Yarrowia lipolytica]
          Length = 344

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 103/327 (31%), Gaps = 44/327 (13%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTELMRV--------RD 65
              +      L  L+  D   Y+    +     R +   +     +L ++        R 
Sbjct: 14  STLASSRQKCLDELKKHDKSSYIIQSYVQNEHARDAFIAIRSLCLDLSKLNAGATGSRRA 73

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMIE 122
            +       ++L +W++  +   +    +S     P    L S +   DL  +YF+ +I+
Sbjct: 74  GSDVSEPSQIKLGFWREGIQRVFQRTADKSGALNHPTLALLDSTLDHVDLSKRYFITLIQ 133

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-------------DSERYSASLRV 169
           +      N    D      Y   + S+  +L                  + E +S    +
Sbjct: 134 SREAYMGNRPFPDVDSMAVYGEGLFSQPNYLFLEATVGTSKNTTEFLKLNPEVHSELHTI 193

Query: 170 IKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNS-DRISLAIKI 227
           I + G    I  L+  LP +   R  +  P+  L +  L  E  L G    D++S  I  
Sbjct: 194 IAHIGQGSGIAALLKGLPYYINQRNYVPLPVQGLVSHDLSEEEVLRGTFDKDKLSSLIFE 253

Query: 228 FAELGLKYLFKAREEMRYI----------LP------DVFPAFIPVSITESVLKHAQNHG 271
            A     +L  A   +  +                   +F   +    T+  L+  ++  
Sbjct: 254 VATRANDHLISANTLLEQLKHNLNSVPDAPKGGYFTSSMFLPMMSYIPTKIFLEKLESAD 313

Query: 272 FKIVSHSHTPN-QLVRPWYMLSSSIKK 297
           F I S        +  P+    +S  K
Sbjct: 314 FDIFSGKLQTKDNIALPYKSWRASQTK 340


>gi|87133513|gb|ABD24399.1| phytoene synthase [Dietzia sp. CQ4]
          Length = 293

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 69/292 (23%), Gaps = 22/292 (7%)

Query: 9   NTRKEEKIFSRDSLFVLR-NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
             +     F+  +       LR       LAC L  P  R  ++ +Y +      V D A
Sbjct: 2   TPQSPHAEFTEAARACSDVILRRYSTSFSLACRLLAPATRPHVAAIYAWARVGDEVVDGA 61

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
            +       L        +           P +       R++ +  +      ++   D
Sbjct: 62  MDDPDAARELIA-DARRRTHRAVERGLDPDPVTHAFADTARRFGIGARLIDPFYDSMEAD 120

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDS---ERYSASLRVIKYAGIAQFIGQLIC 184
                    +    Y    +  +  +                    +  G A      + 
Sbjct: 121 LELTEH-TPESLRRYIHGSAEVIGEMCLRTFAGGGLGDSDEMAAGARALGSAFQKVNFLR 179

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
            +               LG   L      +  + D     +   A+     L  AR  + 
Sbjct: 180 DIREDS---------LDLGRNYLPGRDPRALTDRD-----VAELADDVDADLRIARASID 225

Query: 245 YILPDVFPAFIPV-SITESVLKHAQ-NHGFKIVSHSHTPNQLVRPWYMLSSS 294
            I      A +    +   +    +      + +        V+   +  ++
Sbjct: 226 RIPGRDRVAVLAAHDLFAELNDRLRAAGAAGVSAGRVRVPGPVKLAVIGRAA 277


>gi|19553629|ref|NP_601631.1| phytoene/squalene synthetase [Corynebacterium glutamicum ATCC
           13032]
          Length = 302

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/287 (9%), Positives = 70/287 (24%), Gaps = 37/287 (12%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            +        LA  L  P  R  +  LY        V                  +I ++
Sbjct: 37  VIAHYSSSFTLASKLLSPKIRRDIEALYAMVRVADEVV--DGAAAAAGCAPDAVAEILDN 94

Query: 87  STKGL-----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
             + +     +     P      +  R+      + +   ++   D    S  D  Q + 
Sbjct: 95  YERQVLLSLSVPFHTDPVIHAFGNTARKCGFEQAHIVAFFDSMRRDLSQTSY-DPTQLDE 153

Query: 142 YAFRISSRLIHLATMILDSE------RYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQ 194
           Y +  +  +  +   I   +        +      +  G A      +  L       G+
Sbjct: 154 YIYGSAEVIGLMCLKIFLQDSTASPQDRATMEHGARRLGAAFQKVNFLRDLAEDREGLGR 213

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            Y P                   ++ +            + L  AR  +  +        
Sbjct: 214 SYLP-----------------VFTEEMRD---EIVTDIREDLDAARLSIPLLPFGARTGV 253

Query: 255 IPV-SITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                +   ++ + ++     + +       + +      +  K+ F
Sbjct: 254 RAATDLYGCLVDNLESASLEDLKNGRIRVPSMKKASLATKAMWKEVF 300


>gi|167590737|ref|ZP_02383125.1| Squalene/phytoene synthase [Burkholderia ubonensis Bu]
          Length = 240

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 58/216 (26%), Gaps = 4/216 (1%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  L+ L+    EL        +P     +L WW 
Sbjct: 29  DYCQQKAAPAGSSVYYALRQAPFAVQPRLTALFALRRELEETVKETSDPTVGHTKLAWWH 88

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +       E   P +  L                ++  +  D       D      
Sbjct: 89  KELAALAA---GEPSHPVTKALAQHHPSIAAETDALRALVSGYGMDLEQARYLDFANLRR 145

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y  ++      L      +       +     G A  + Q + +L      G++Y P+D 
Sbjct: 146 YIAQVGGGFASLVARASAARPAE-PQQWADEVGHALMLAQFVQELGNDARHGRIYLPIDE 204

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
           L    +     L+ + S   +  +          L 
Sbjct: 205 LQRYNVTAADLLNRRYSPAFTELLTFQTARARDALA 240


>gi|25027197|ref|NP_737251.1| phytoene synthase [Corynebacterium efficiens YS-314]
 gi|259506666|ref|ZP_05749568.1| phytoene synthase [Corynebacterium efficiens YS-314]
 gi|23492478|dbj|BAC17451.1| phytoene synthase [Corynebacterium efficiens YS-314]
 gi|259165750|gb|EEW50304.1| phytoene synthase [Corynebacterium efficiens YS-314]
          Length = 308

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 70/292 (23%), Gaps = 32/292 (10%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRD 74
                 + ++       +A L+  P  R  +  LY        + D         P    
Sbjct: 25  AVKASHQVIKRYSTSFSMATLMLSPQIRRDIRNLYSVVRIADEIVDGTALAAGYTPAELG 84

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L  ++    ++                    R+ D   ++ +    +   D       
Sbjct: 85  TLLDDYEAAVLAAPAQHFHT--DLALQAYGDTARRCDFQEEHVVAFFASMRRDLTASEH- 141

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSE------RYSASLRVIKYAGIAQFIGQLICQLPI 188
           D   FE Y +  +  +  L   + +        R        +  G A      +  L  
Sbjct: 142 DPGSFEAYVYGSAEVIGLLCLSVFNQGRPVSEARQQRMREGARALGAAFQKINFLRDLAE 201

Query: 189 HYHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
                G+ YFP       G    +    Q         +         L  A      + 
Sbjct: 202 DQQELGRTYFP-------GTTAGALTEPQ--------KQQLIADIRVDLSTAERTYPALP 246

Query: 248 PDVF-PAFIPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSSIKK 297
                       + E +    +     K++    +     +   +  +++K 
Sbjct: 247 VQARIGVIAAALLFEGLTDRIEQTPAVKLLEERISIPITTKLMILGRATVKG 298


>gi|116490189|ref|YP_809733.1| phytoene/squalene synthetase [Oenococcus oeni PSU-1]
 gi|116090914|gb|ABJ56068.1| Phytoene/squalene synthetase [Oenococcus oeni PSU-1]
          Length = 236

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 67/186 (36%), Gaps = 3/186 (1%)

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-SAS 166
           + +++     + M      D  N  I       HY ++++  +  +   IL      S+ 
Sbjct: 44  KTFEIDKLEMMQMFAGQDSDLKNKVINTYDDLIHYCYQVAGTVGCMIFPILSKNNNLSSI 103

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
              +   GIA  +  ++  +     R +++ P  +L    +++E     +    +   I 
Sbjct: 104 RNKVIDIGIAMQLTNILRDIHEDAIRNRVFIPDQLLVLFKVNKEELKGRKTKRNLKKLIA 163

Query: 227 IFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
             ++  L +     E ++ +      F   + ++  + +L+   +  F+++        L
Sbjct: 164 FLSKKALFFYESELEVIQTVDSFSAKFSLKLAIATYKKILEKIIDSDFEVLEGRIYVTNL 223

Query: 285 VRPWYM 290
            +   +
Sbjct: 224 EKAKIL 229


>gi|221639142|ref|YP_002525404.1| Phytoene/squalene synthetase [Rhodobacter sphaeroides KD131]
 gi|221159923|gb|ACM00903.1| Phytoene/squalene synthetase [Rhodobacter sphaeroides KD131]
          Length = 255

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 101/279 (36%), Gaps = 26/279 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+ A + +PP  R  L  LY F+ E+ R     R P+  +MRLQ+
Sbjct: 2   SLEACAALVERGDPDRHAAAMAAPPAARARLWPLYAFNLEVARAPWVTREPMIAEMRLQF 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D+ E              +  L +++R+  LP      MIEA   D + +   D   F
Sbjct: 62  WRDVVEE--APEGRSRAHEVAGPLAALMREAALPVPLLEAMIEARRHDIWTEPFADEAAF 119

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             +    ++    +    L     + +   ++  G A  +   +  +P    RG+   P 
Sbjct: 120 GAHLEATAA--GLMWASALALGAPAEAETAVRAVGWAAGLAAWLQAVPELEARGRQPLP- 176

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D    A+   A  GL  L   R     +  D  PA +P   
Sbjct: 177 -------------------DGRPEAVVALARAGLARLESGRRV--RLPRDARPALLPAWQ 215

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             ++L+ A +   ++ +     ++  R   +L ++   R
Sbjct: 216 AGALLRLAVDEPGRVAAGRLQLSEFARRGRLLRAAFTGR 254


>gi|16078144|ref|NP_388961.1| squalene/phytoene synthase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2145381|emb|CAA70644.1| YisP [Bacillus subtilis]
 gi|2633416|emb|CAB12920.1| putative squalene/phytoene synthase [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 274

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/266 (10%), Positives = 72/266 (27%), Gaps = 15/266 (5%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           ++ K          + + +     + A    P   R +   +  F               
Sbjct: 6   EKMKEIKEAYQQCGQIVGEYAPACFKALSYLPLKQRQASWAVLSFCHTAA---------S 56

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
             +  L  ++   +   +                  R + L ++ F + I A        
Sbjct: 57  ADEKVLPAFEAKADHVYQRTNNGKQH-LWKAFDHAYRTFTLESEPFREFIAA--QKEDAK 113

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
              D  +   YA+R       +   IL   +     +     G+A  + + +  L     
Sbjct: 114 PYDDLDELLMYAYRTGGAAGLMLLPILTRRKQDQLKQAAVSLGLAIQLVRFLSDLGTDQQ 173

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
           + +   P  ++   G        G  +   ++  +  A     YL + ++ +        
Sbjct: 174 KNR--IPRQVMQQFGYTEADLQKGTVNKAFTMTWEYIAFEAEAYLEECQDALPLFPQYSQ 231

Query: 252 -PAFIPVSITESVLKHAQNHGFKIVS 276
                 + +  +VL+  +     +  
Sbjct: 232 KTVKAALHLHRAVLEKIRAKQHDVFQ 257


>gi|188581085|ref|YP_001924530.1| squalene synthase HpnC [Methylobacterium populi BJ001]
 gi|179344583|gb|ACB79995.1| squalene synthase HpnC [Methylobacterium populi BJ001]
          Length = 299

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 21/270 (7%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P  R ++   Y +      V D    +P  +   L    D      
Sbjct: 17  QHDENFPVASHLIHPRNRGAILAFYNYVRAGDDVADHTGLSPERKIEMLDALADALTGKG 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P    L   +  ++ P  + L++++A   D+      D  +  HY    + 
Sbjct: 77  G------SDPSVEPLKRELAAHNQPPTHALELLDAFRMDARKSRYADWDELIHYCRYSAM 130

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +   +  +           A  +   +      +    ++Y PLD++G  G 
Sbjct: 131 PVGRFVLDVHGEDP-ARVYPTSDAICAALQVLNHLQDCGKDFRNLDRVYIPLDVMGKHGA 189

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA------FIPVSITE 261
           D     + + +  +   I+  AE  L  L +       I              + V +T+
Sbjct: 190 DVAMLGADKATPELRAVIRELAERTLVLLEEGAPLPNRIDDFRLSLEIAAIHRLAVVLTK 249

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +L          +S      +       L
Sbjct: 250 GLLTR------DPLSEKVHHGKAAFALTAL 273


>gi|296115030|ref|ZP_06833672.1| hypothetical protein GXY_04589 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978367|gb|EFG85103.1| hypothetical protein GXY_04589 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 283

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 88/264 (33%), Gaps = 14/264 (5%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR-----V 63
              ++ +  +          R  D DR+L  L  P   R +   L  F+ E +R      
Sbjct: 2   TPTRDAEHSTDGLSECGAIARRFDPDRFLCALFVPAPAREAAMTLVAFNHECVRALSTPA 61

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
                 PI   +RLQWW+D+ +            P ++ L+ ++    +       +++A
Sbjct: 62  SWAVAGPIAGMIRLQWWRDVIDG-----GDPQRHPVAIALVDLLACGAVRADTVRGIVDA 116

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
              +     + D   +       +  +      +LD     A   V +  G     G L 
Sbjct: 117 RECELDG--LPDWPAWRANMRAGAGGVQRAMAEVLDPRDDVACDAVAE-LGAVYGAGALA 173

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA-ELGLKYLFKAREE 242
             L      G+   P   L AVGL+R+    G  +     A+       G  +  +A   
Sbjct: 174 RHLGAVLRSGRCPLPDVALDAVGLERDGLRDGAATAGQRAALHALLRAEGAAFHARALTI 233

Query: 243 MRYILPDVFPAFIPVSITESVLKH 266
              +   V PA +P  +    L+ 
Sbjct: 234 APRLPRTVLPAALPAVLGRRDLRA 257


>gi|163743242|ref|ZP_02150623.1| hypothetical protein RG210_15864 [Phaeobacter gallaeciensis 2.10]
 gi|161383430|gb|EDQ07818.1| hypothetical protein RG210_15864 [Phaeobacter gallaeciensis 2.10]
          Length = 259

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 98/286 (34%), Gaps = 27/286 (9%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
              F  D +     ++  D DR+   + SP   R +L  +Y F+ EL R    +   +  
Sbjct: 1   MATFDDDLIACADLVQKGDPDRFATVMASPVSTRAALFAIYAFNLELARAPWASTEAMIA 60

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +MR+QWW+D+      G         +  L  ++R       +   M EA  +D Y D  
Sbjct: 61  EMRVQWWRDVGAEIASGGPV-RRHFVATPLARVLR--PDLAVHIDAMAEARRWDIYRDPF 117

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D      +  + +  L+ +A     +   +   R+++       +   +  +P      
Sbjct: 118 EDEAALADHIDKTTGSLMWMAA----ATLGARDERLVRRFAYGVGVANWLRAIPKLVAEK 173

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
           ++                       D     ++  A+ GL  L  AR     +     PA
Sbjct: 174 RVPLL--------------------DGTPEGVRALAQDGLAALKDARANRGAMAASSLPA 213

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +P    + +L+ A     ++   +   ++  R   ++      R+
Sbjct: 214 LLPGWQADKILQQAVAAPQRVADDALGTSEFRRRTSLIYRVSTGRW 259


>gi|221308920|ref|ZP_03590767.1| hypothetical protein Bsubs1_05976 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313244|ref|ZP_03595049.1| hypothetical protein BsubsN3_05907 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318167|ref|ZP_03599461.1| hypothetical protein BsubsJ_05856 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322442|ref|ZP_03603736.1| hypothetical protein BsubsS_05962 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|264664574|sp|O06728|YISP_BACSU RecName: Full=Putative phytoene/squalene synthase yisP
 gi|1934837|emb|CAB07958.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
          Length = 267

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/264 (10%), Positives = 70/264 (26%), Gaps = 15/264 (5%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
            K          + + +     + A    P   R +   +  F                 
Sbjct: 1   MKEIKEAYQQCGQIVGEYAPACFKALSYLPLKQRQASWAVLSFCHTAA---------SAD 51

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +  L  ++   +   +                  R + L ++ F + I A          
Sbjct: 52  EKVLPAFEAKADHVYQRTNNGKQH-LWKAFDHAYRTFTLESEPFREFIAA--QKEDAKPY 108

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D  +   YA+R       +   IL   +     +     G+A  + + +  L     + 
Sbjct: 109 DDLDELLMYAYRTGGAAGLMLLPILTRRKQDQLKQAAVSLGLAIQLVRFLSDLGTDQQKN 168

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-P 252
           +   P  ++   G        G  +   ++  +  A     YL + ++ +          
Sbjct: 169 R--IPRQVMQQFGYTEADLQKGTVNKAFTMTWEYIAFEAEAYLEECQDALPLFPQYSQKT 226

Query: 253 AFIPVSITESVLKHAQNHGFKIVS 276
               + +  +VL+  +     +  
Sbjct: 227 VKAALHLHRAVLEKIRAKQHDVFQ 250


>gi|219126938|ref|XP_002183703.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404940|gb|EEC44885.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 2198

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 103/303 (33%), Gaps = 35/303 (11%)

Query: 4    KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLY-RISLSFLYYFHTEL-- 60
            + +T N  ++     RD    ++ +R  D   YL  LL P    + +   +  F  E   
Sbjct: 1882 RIVTSNAEQQ-----RDLDSAIKTVRLHDPAGYLPGLLLPERRMQKAYYAVRGFWIESGL 1936

Query: 61   -----MRVRDTARNPITRDMRLQWWKDIFESSTKGLI---AESISPFSVELLSIVRQYDL 112
                  ++        + + +L+WWK   ++   G +    ++  P    L S+  +   
Sbjct: 1937 RFGNSAKI----SKHSSPEEQLKWWKQGVDAVFAGDVLTVNQNHHPTLRLLQSLSTEVPW 1992

Query: 113  PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATM--ILDSERYSASLRVI 170
              Q+F D+I+    D              +A +    L  L      +  +   A     
Sbjct: 1993 TKQHFDDIIDGRAKDLNVKQYETVADLTRHAEQSCGTLAELVLESGEIMPDISPACHEAA 2052

Query: 171  KYAGIAQFIGQLIC-QLPIHYHRGQLYFPLDILGAVGLDRESFL-------SGQNSDRIS 222
            +  GIA  +   +   +P+    G+L  P ++    G+    +L              + 
Sbjct: 2053 RLVGIAHGVTNALRLSIPVISTTGKLIIPTELTTKYGVRSPRYLLSALGQGDKVCLRAME 2112

Query: 223  LAIKIFAELGLKYLFKAREEMRYILPD-----VFPAFIPVSITESVLKHAQNHGFKIVSH 277
             A++   E     L KAR+    IL +          +P   +E+ L   +   +++   
Sbjct: 2113 NAVRDIVETARDNLQKARDLREAILAEPNGNKAVSVLLPGLASETFLNRLEKSQYQLTDR 2172

Query: 278  SHT 280
            +  
Sbjct: 2173 NLR 2175


>gi|21325204|dbj|BAB99826.1| Phytoene/squalene synthetase [Corynebacterium glutamicum ATCC
           13032]
          Length = 292

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/287 (9%), Positives = 70/287 (24%), Gaps = 37/287 (12%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            +        LA  L  P  R  +  LY        V                  +I ++
Sbjct: 27  VIAHYSSSFTLASKLLSPKIRRDIEALYAMVRVADEVV--DGAAAAAGCAPDAVAEILDN 84

Query: 87  STKGL-----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
             + +     +     P      +  R+      + +   ++   D    S  D  Q + 
Sbjct: 85  YERQVLLSLSVPFHTDPVIHAFGNTARKCGFEQAHIVAFFDSMRRDLSQTSY-DPTQLDE 143

Query: 142 YAFRISSRLIHLATMILDSE------RYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQ 194
           Y +  +  +  +   I   +        +      +  G A      +  L       G+
Sbjct: 144 YIYGSAEVIGLMCLKIFLQDSTASPQDRATMEHGARRLGAAFQKVNFLRDLAEDREGLGR 203

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            Y P                   ++ +            + L  AR  +  +        
Sbjct: 204 SYLP-----------------VFTEEMRD---EIVTDIREDLDAARLSIPLLPFGARTGV 243

Query: 255 IPV-SITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                +   ++ + ++     + +       + +      +  K+ F
Sbjct: 244 RAATDLYGCLVDNLESASLEDLKNGRIRVPSMKKASLATKAMWKEVF 290


>gi|99080996|ref|YP_613150.1| hypothetical protein TM1040_1155 [Ruegeria sp. TM1040]
 gi|99037276|gb|ABF63888.1| hypothetical protein TM1040_1155 [Ruegeria sp. TM1040]
          Length = 258

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/284 (19%), Positives = 106/284 (37%), Gaps = 27/284 (9%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
            F  D +     ++  D DR+LA + +P   R  L  LY F+ E+ R    ++  +  +M
Sbjct: 2   QFDDDLIACAEAVQKGDPDRFLAAMAAPVEARAVLFALYAFNLEISRAPWASQESMIAEM 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           R+QWW+D+      G         +  L  +V +     +    M EA  +D Y D   D
Sbjct: 62  RVQWWRDVGAEIAAGGPV-RRHYVATPLTRLVDR--SAARAIDAMAEARRWDIYRDPFED 118

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
              F+ Y    +  L+ +A     +   +A   V++    A  +   +  +P    + ++
Sbjct: 119 EAAFDAYIDANAGGLMWMAA----ASLGAADEAVVRDYAYAAGLAAYMRAIPELEAQHRV 174

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
                                  D  S  +   AE GL  L  AR     + P    A +
Sbjct: 175 PLL--------------------DGTSAGLVALAERGLDRLAAARRRRGAVSPAARAALL 214

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           P    E++L+  +    ++ + +   ++  R   ++  +   R+
Sbjct: 215 PGWQAEALLRQVRAEPERVGAGALGVSEFRRRISLMWQAGSGRW 258


>gi|163746508|ref|ZP_02153866.1| hypothetical protein OIHEL45_13925 [Oceanibulbus indolifex HEL-45]
 gi|161380393|gb|EDQ04804.1| hypothetical protein OIHEL45_13925 [Oceanibulbus indolifex HEL-45]
          Length = 254

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 93/280 (33%), Gaps = 27/280 (9%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
            F  D       +   D  R+ A + +P   R  L  LY F+ E+ R     +  +  +M
Sbjct: 2   TFDADLNACAAMVERADPWRFRAAMAAPVEARKLLFPLYAFNVEVARAPWVTQEAMIAEM 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RLQWW+D  E   KG         +  L  ++       +   +++ A  +D Y D   D
Sbjct: 62  RLQWWRDALEEIAKGGPV-RRHEVTTPLAGVIT--PEDAKLLDELVAARRWDIYKDPFED 118

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
              FE Y  + +  L+ +A         +    V++ A  A  I   +C +P     G++
Sbjct: 119 AGHFERYIDQTAGHLMWVAAR----RLGATDEAVVRDAAFATGIAAWLCAIPNLEEAGRV 174

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
                                  D     +   A   L+ L  AR     I      A +
Sbjct: 175 PLL--------------------DGTPEGVSALASGALQRLKSARAGRGKIPAQARAALL 214

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           P +    VLK A     K+   +    +       + S  
Sbjct: 215 PAAHAGPVLKAAVADPQKVSQAALPDPRRHFALRAMVSRW 254


>gi|27903500|gb|AAO24767.1| phytoene synthase [Citrus maxima]
          Length = 153

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 50/153 (32%), Gaps = 6/153 (3%)

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQ 177
               D          +   Y + ++  +  ++  ++           +        GIA 
Sbjct: 1   GMRMDFRKSRYKPFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIAN 60

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            +  ++  +     RG++Y P D L   GL  +   +G+ +++    +K   +    +  
Sbjct: 61  QLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFD 120

Query: 238 KAREEMRYILPDVF-PAFIPVSITESVLKHAQN 269
            A   +  +      P +  + +   +L   + 
Sbjct: 121 MAENGVTELSEASRWPVWASLLLYRQILDEIEA 153


>gi|259418770|ref|ZP_05742687.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
 gi|259344992|gb|EEW56846.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
          Length = 258

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 103/284 (36%), Gaps = 27/284 (9%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
            F  D +     ++  D DR+LA + +P   R  L  LY F+ E+ R    ++  +  +M
Sbjct: 2   QFDDDLIACAEAVQKGDPDRFLAAMAAPVEARPLLFALYAFNIEMSRAPWASQESMIAEM 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           R+QWW+D+      G         +  L  +V       Q    M EA  +D Y D   D
Sbjct: 62  RVQWWRDVGAEIASGGQV-RRHYVATPLARLV--NHEAAQVIDAMAEARRWDIYRDPFED 118

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
              F+ Y    S  L+ +A     +    A   +++    A  +   +  +P    + ++
Sbjct: 119 EAAFDTYIDATSGGLMWMAA----ASLGPADEGIVRDYAYAAGLAAYLRAIPEFEAQKRV 174

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
                                  D  +  +   AE GL  L  AR   + I      A +
Sbjct: 175 PLL--------------------DGTNAGLIQLAERGLDRLAAARRRRQVISSAASSALL 214

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           P     ++L+  +    ++ + +   ++  R   ++  +   R+
Sbjct: 215 PGWQAGAILRQVRAEPARVAAGALGLSEFRRRVSLMWQAGTGRW 258


>gi|146339634|ref|YP_001204682.1| putative phytoene synthase [Bradyrhizobium sp. ORS278]
 gi|146192440|emb|CAL76445.1| putative phytoene synthase [Bradyrhizobium sp. ORS278]
          Length = 291

 Score =  102 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 12/263 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             D +  +A  +  P +R  +   Y F      + D    P    +RL    +      +
Sbjct: 13  HRDENFPVASWIIRPEHRALILAFYNFVRTADDIADHPSLPGEEKLRLLDLLE-----AE 67

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
                     +V L   + +  +P ++ LD++ A   D       +  +  HY    +  
Sbjct: 68  LTGTGETQDVAVSLRRALAERGMPPRHALDLLVAFRMDVTKLRYENWDEVIHYCRYSAMP 127

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLD 208
           +      +      +A+            I   +      Y    ++Y P D L   G  
Sbjct: 128 VGRFM--LDVHGESTATWPASDAICAGLQINNHLQDCGKDYKALNRVYLPRDALAEAGAA 185

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKH 266
            E     ++S ++   ++  A      L + R+    +    F   I V  +  + ++  
Sbjct: 186 VEMLGEAKSSPQLLSCLQKLAVRNAALLEEGRDLNSGVKDFRFGLEIAVIQAFADRIVAL 245

Query: 267 AQNHGFKIVSHSHTPNQLVRPWY 289
            Q      +S             
Sbjct: 246 LQVR--DPLSERVHLTPAGMLGL 266


>gi|62391273|ref|YP_226675.1| phytoene synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41326613|emb|CAF21095.1| PHYTOENE SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 287

 Score =  102 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/287 (9%), Positives = 70/287 (24%), Gaps = 37/287 (12%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            +        LA  L  P  R  +  LY        V                  +I ++
Sbjct: 22  VIAHYSSSFTLASKLLSPKIRRDIEALYAMVRVADEVV--DGAAAAAGCAPDAVAEILDN 79

Query: 87  STKGL-----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
             + +     +     P      +  R+      + +   ++   D    S  D  Q + 
Sbjct: 80  YERQVLLSLSVPFHTDPVIHAFGNTARKCGFEQAHIVAFFDSMRRDLSQTSY-DPTQLDE 138

Query: 142 YAFRISSRLIHLATMILDSE------RYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQ 194
           Y +  +  +  +   I   +        +      +  G A      +  L       G+
Sbjct: 139 YIYGSAEVIGLMCLKIFLQDSTASPQDRATMEHGARRLGAAFQKVNFLRDLAEDREGLGR 198

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            Y P                   ++ +            + L  AR  +  +        
Sbjct: 199 SYLP-----------------VFTEEMRD---EIVTDIREDLDAARLSIPLLPFGARTGV 238

Query: 255 IPV-SITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                +   ++ + ++     + +       + +      +  K+ F
Sbjct: 239 RAATDLYGCLVDNLESASLEDLKNGRIRVPSMKKASLATKAMWKEVF 285


>gi|83311607|ref|YP_421871.1| phytoene/squalene synthetase [Magnetospirillum magneticum AMB-1]
 gi|82946448|dbj|BAE51312.1| Phytoene/squalene synthetase [Magnetospirillum magneticum AMB-1]
          Length = 245

 Score =  102 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 6/248 (2%)

Query: 53  LYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDL 112
           LY F+ E+ +V+++ R P+   +RLQWW+D   S  +G   +   P +  L  ++R   L
Sbjct: 3   LYAFNVEIAKVQESVREPMAGMIRLQWWRDSLISGAEGGACD-NHPVARPLGELIRGCGL 61

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY 172
           P + F D+I A   D    S  D  + E YA R  S  +    + +         R  ++
Sbjct: 62  PLEPFDDLISARQDDLEGFSPKDLPEAERYAERS-SAALTALALAVLGAETEDFRRAGRH 120

Query: 173 AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQN-SDRISLAIKIFAEL 231
            GIA  +   +  L  H   G+L  P D+L   G    +   G+  ++ ++ A +   + 
Sbjct: 121 MGIAWGLVGNLRALGHHLSMGKLTLPEDVLRTAGTSAGAIREGRASTESLTAAAQAMGQC 180

Query: 232 GLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
              +L +AR            A +P  + +  L+  +   +       +      P  ++
Sbjct: 181 ARHHLAEARRVRPG--RHGLAALLPAILADGYLQVLEKARWNPFDSRVSRPNPR-PVRLI 237

Query: 292 SSSIKKRF 299
            +    RF
Sbjct: 238 IAQAMGRF 245


>gi|325091157|gb|EGC44467.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 310

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 53/312 (16%), Positives = 89/312 (28%), Gaps = 78/312 (25%)

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQ--------YDLPN 114
           + DT   P    MRLQ+W+D    +  G       P ++ L S + +          +  
Sbjct: 2   IPDTTSTPTIGLMRLQFWRDTITRTLAGQP--PKEPIAILLASALSELETRTGGQARISK 59

Query: 115 QYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAG 174
            +FL MI +      N         E YA    S L++L    L     +A   +  + G
Sbjct: 60  GWFLRMINSREQYLTNTPYTSISALESYAENTYSTLLYLTLSALPLTSVTA-DHLASHIG 118

Query: 175 IAQFIGQLICQLPIHY-------------------------HRGQLYFPLDILGAVGLDR 209
            A  I  ++  +P+                             G +  PLD++   GL  
Sbjct: 119 KAAGISTVLRGIPLIAFPAPPSHHSNQPGGLGGGAGGGSGARVGTITLPLDVMAETGLKE 178

Query: 210 ESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-------------------- 248
           E     G  +  +  A+   A     +L  AR+ ++ +                      
Sbjct: 179 EDIFRHGAEAPGLRDAVFTVATRASDHLITARQMLKNLRAGQGVGHDFEHEGEEGHEYND 238

Query: 249 ---------------------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
                                  F   +P   T   L   Q   F I            P
Sbjct: 239 VSSSGNGGDMSTSSAQLAEVERSFGVLMPAVSTSLWLDRLQAVDFDIFKPELRTFDWRLP 298

Query: 288 WYMLSSSIKKRF 299
           W    ++ ++ F
Sbjct: 299 WKAYWANRRRAF 310


>gi|89069970|ref|ZP_01157302.1| Probable Phytoene/squalene synthetase [Oceanicola granulosus
           HTCC2516]
 gi|89044418|gb|EAR50549.1| Probable Phytoene/squalene synthetase [Oceanicola granulosus
           HTCC2516]
          Length = 253

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+LA +  PP  R  L  LY F+ E+ R       P+  +MRLQW
Sbjct: 2   SLAACAAIVERGDPDRFLAAMSCPPPAREVLFPLYAFNVEVSRAPYVTDEPMIAEMRLQW 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D  E    G  A      +  L  ++R +DLP     + + A  +D + +   D   F
Sbjct: 62  WRDAVEEIDAGK-APRAHEVAAPLAGVMRAHDLPAALLDEAVAARRWDVWKEPFEDAAAF 120

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           E +  R +  L  L+ +       +A    ++    A  +   +  +P    +G      
Sbjct: 121 EAHIQRTAGHLAWLSAL--GLGAGAAEEAGVREVAHAGGVAAWLQAVPALEAKGLQPLVA 178

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                     +   +   +    L                             A  P   
Sbjct: 179 G-------RPDDVRALAGAALARLKAARVRSEA-----------------ARLAVRPAWQ 214

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYM-LSSSIKK 297
             ++L+ A     ++   +   ++  R   +   ++ + 
Sbjct: 215 AGTLLRLAVREPERVARGALALSEFRRKALLGWRAARRG 253


>gi|83311608|ref|YP_421872.1| phytoene/squalene synthetase [Magnetospirillum magneticum AMB-1]
 gi|82946449|dbj|BAE51313.1| Phytoene/squalene synthetase [Magnetospirillum magneticum AMB-1]
          Length = 276

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 84/268 (31%), Gaps = 12/268 (4%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
           +  +A LL P   R ++   Y+F      + D+    +T + ++    D  + + +G  +
Sbjct: 14  NFPVASLLLPKSKRATIMAYYHFARHADDIGDSPS--LTSEEKVAGL-DALDRALRGTES 70

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
                 + E    V       ++   ++ A   DS  D   D      Y    ++ +   
Sbjct: 71  GPALVLAEEYRRAVDGDAAMIEHASQLLHAFRRDSVRDYCADWADLMEYCRYSAAPVGRF 130

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESF 212
              +  S     +         A  +   +      YH   ++Y P D L A GL  E  
Sbjct: 131 LLDL--SGESHDTFAPSDALCAALQVLNHVQDCGKDYHELKRVYIPRDWLAAQGLSIEVL 188

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREE---MRYILPDVFPAFIPVSITESVLKHAQN 269
               +   +   +    +     +  A+     ++ +   +  A I V + E +    + 
Sbjct: 189 AGTSSPAALRHVLDQMLDATDGLITLAQPLAGRVKDLRMRLQSA-ITVRVAERLSAKLRR 247

Query: 270 HGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                ++      +L      L    + 
Sbjct: 248 --GDPLAGRVKLGKLDYAGVFLVGLWRG 273


>gi|254510794|ref|ZP_05122861.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
 gi|221534505|gb|EEE37493.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
          Length = 258

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 99/283 (34%), Gaps = 27/283 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       +   D DR++A + +P   R  L  LY  + E+ R     + P+  +MR
Sbjct: 3   FDDDIKACAALVHRADPDRFMAAMAAPVAARKVLFPLYALNVEVARAPWVTQEPMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  +   +G            L  ++  +        + +    +D Y D   D 
Sbjct: 63  LQWWRDALKEIAEGPTV-RRHEVVTPLSQVLSPHL--AAQLDEYVAVRRWDIYRDPFEDK 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
             FE Y  + S  L    T++       A   V++  G A  +      +P    RG++ 
Sbjct: 120 AHFEAYINQSSGTL----TVVSAQALGQADESVLRDFGYAMGVANWFRAIPDLEARGRIP 175

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
                                 D     ++  A   L  L +A+     +     PA   
Sbjct: 176 LL--------------------DGTQDGVRALAHEALGRLQQAQSARAAVSIQARPALYV 215

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              TE VL+   +   ++ +      ++ R + ++ ++   R+
Sbjct: 216 GWQTEWVLRRVLSQPSRVAAGDLAQGEIRRRFSLMRTAATGRW 258


>gi|323507521|emb|CBQ67392.1| conserved hypothetical protein [Sporisorium reilianum]
          Length = 378

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 102/308 (33%), Gaps = 29/308 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 ++L  L   D+  YLA    P   +   + +  F+ E+  ++DT  N +   MR
Sbjct: 71  LQSPHSYLLEELAKRDHASYLAHHFYPKHLQTHFAAIRTFNVEIAGLKDTVSNELLGRMR 130

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAHFFDS 128
           + WW+D  + + +   A+   P  + L    +           L   +FL +I+    D 
Sbjct: 131 MGWWRDAVQGAYQNRPAK--HPVVLALRDAFQDPAVRDNAAGGLMLDHFLRIIDVREADL 188

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPI 188
            +D               +S  +   ++ L   R      +  + G    +   I  +P 
Sbjct: 189 ADDFQAPSLASLESYAESTSSRLLYLSLNLLGVRSDVVDELFSHLGKVAGLSLAISSIPY 248

Query: 189 HYHRGQ------------LYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKY 235
           H H               L FP + +    +  E     G  ++    A+   A     Y
Sbjct: 249 HTHPPPHMRNSITKGARKLVFPREFVHDHAVVEEDVFRNGPEANGFRDAVFALATRANDY 308

Query: 236 LFKAREEMR-----YILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ-LVRPWY 289
           L  AR  ++      +   V P  + V    S L+  +   F     S    +    PW 
Sbjct: 309 LITARTIVKDEFAGRVPAAVVPPLVGVVPARSYLERLEKADFNPYHASLQSGKHWRLPWD 368

Query: 290 MLSSSIKK 297
           M  +S  +
Sbjct: 369 MWRASRTR 376


>gi|163735854|ref|ZP_02143283.1| hypothetical protein RLO149_00865 [Roseobacter litoralis Och 149]
 gi|161390940|gb|EDQ15280.1| hypothetical protein RLO149_00865 [Roseobacter litoralis Och 149]
          Length = 259

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 97/278 (34%), Gaps = 25/278 (8%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       +   D DR+ A + SP   R  L  LY F+ E+ R     +  +  +MR
Sbjct: 3   FDADVTACAAIVEKADPDRFAAVMASPVAARAVLFVLYAFNVEVSRAPWLTQETMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+ E   +G            L   + +     Q    ++ A  +D Y D+  D 
Sbjct: 63  LQWWRDVLEEIGQGAQV-RRHEVVTPLSGFLSEPAT--QVLDRLVAARRWDIYKDAFEDA 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSE--RYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
             F++Y    ++ L+ +A   LD +      +  +++  G A  + + +  +P      +
Sbjct: 120 AHFDNYLNETAAGLMWVAACALDPDLTPQGDAEAMVRACGRATGLARFLQAVPALEAHSR 179

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           +        A+     + L    + ++                      R +     PA 
Sbjct: 180 IPLVDGRAEAIADLARAALDALPAPKL--------------------LKRTLGDAAKPAI 219

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
               +T S+LK       ++       + + R   +  
Sbjct: 220 TEAFVTRSLLKQVVQDPRRVAVGDLQVHPMRRAALLWR 257


>gi|170782925|ref|YP_001711259.1| bifunctional enzyme phytoene desaturase/synthetase [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169157495|emb|CAQ02686.1| bifunctional enzyme phytoene desaturase/synthetase [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 881

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 68/282 (24%), Gaps = 32/282 (11%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRDMRLQWWK 81
            +R       LA  L  P  R  +  +Y        + D A      +P   +  L   +
Sbjct: 33  VIRRYSTSFGLASRLLGPDVRQHIENVYALVRVADEIVDGAAAGAGVDPAHVEALLDALE 92

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              E     L   S +          R+     +       +   D           F  
Sbjct: 93  QETED--AMLRGYSTNLVVHAFAITARRAGFGAELTAPFFASMRMDLRRMEH-TPASFTE 149

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIK------YAGIAQFIGQLICQLPIHY-HRGQ 194
           Y +  +  +  +          +     I+        G A      +  L   +   G+
Sbjct: 150 YVYGSAEVVGLMCLRAFLVGHATTRPERIRFEEGAKRLGAAFQKVNFLRDLAADHGALGR 209

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            YFP   +                       +   +     L  +   +  +      A 
Sbjct: 210 SYFPGVDVATFS---------------EADKERILDDIDHDLRVSGAVIPDLPASSRRAV 254

Query: 255 -IPVSITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSSS 294
            +   +   +    ++    ++V         V+    L+++
Sbjct: 255 ALAQGLFAELAVRLRDTPASELVRTRVRVPDPVKARIALAAA 296


>gi|148259139|ref|YP_001233266.1| squalene/phytoene synthase [Acidiphilium cryptum JF-5]
 gi|146400820|gb|ABQ29347.1| Squalene/phytoene synthase [Acidiphilium cryptum JF-5]
          Length = 278

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 73/256 (28%), Gaps = 9/256 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +   L     R  +   Y F      + D     P  +  RL   + + +   
Sbjct: 15  RGDENFPVGSWLIRAGLRRHVHAYYAFARNADDIADHPDLAPAEKIARLDAMEAVLDGD- 73

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                 + SP +  L   + + ++   +  +++ A   D+         +   Y    ++
Sbjct: 74  ----DPTRSPSAARLRESLAETNVDPVHARELLVAFRQDATKTRYASWDELMRYCRYSAA 129

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +    R S           +  +   +      +    + Y P D L AVGL
Sbjct: 130 PVGRYVLDLHGESRQSWPA--SDALCASLQVLNHLQDCAKDFDTLDRSYIPGDWLQAVGL 187

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
             ++  +      +        +   +   KA     +++         + +  +   H 
Sbjct: 188 GPDAVTAKATPPALRSVFDAMLKRTAELNAKAARLPGFVVARGLRVETAIIVGLARRLHR 247

Query: 268 QNHGFKIVSHSHTPNQ 283
           +      ++      +
Sbjct: 248 RLLREDPLAGRVKLRR 263


>gi|321314807|ref|YP_004207094.1| putative squalene/phytoene synthase [Bacillus subtilis BSn5]
 gi|320021081|gb|ADV96067.1| putative squalene/phytoene synthase [Bacillus subtilis BSn5]
          Length = 267

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/265 (10%), Positives = 72/265 (27%), Gaps = 15/265 (5%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
            K          + + +     + A    P   R +   +  F                 
Sbjct: 1   MKEIKEAYQQCGQIVGEYAPACFKALSYLPLKQRQASWAVLSFCHTAA---------SAD 51

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           +  L  ++   +   +     +            R + L ++ F + I A          
Sbjct: 52  EKVLPAFEAKADHVYQRTNNGNQH-LWKAFDHAYRTFTLESEPFREFIAA--QKEDAKPY 108

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
            D  +   YA+R       +   IL   +     +     G+A  + + +  L     + 
Sbjct: 109 DDLDELLMYAYRTGGAAGLMLLPILTRRKQDQLKQAAVSLGLAIQLVRFLSDLGTDQQKN 168

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-P 252
           +   P  ++   G        G  +   ++  +  A     YL + ++ +          
Sbjct: 169 R--IPRQVMQQFGYTEADLQKGTVNKAFTMTWEYIAFEAEAYLEECQDALPLFPQYSQKT 226

Query: 253 AFIPVSITESVLKHAQNHGFKIVSH 277
               + +  +V++  +     +  H
Sbjct: 227 VKAALHLHRAVIEKIRAKQHDVFQH 251


>gi|209885793|ref|YP_002289650.1| squalene synthase HpnC [Oligotropha carboxidovorans OM5]
 gi|209873989|gb|ACI93785.1| squalene synthase HpnC [Oligotropha carboxidovorans OM5]
          Length = 292

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 78/259 (30%), Gaps = 14/259 (5%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
           D +  +A  L  P YR  +   Y F      + D     +    +L     +        
Sbjct: 15  DENFPVASHLIHPRYRAPILAFYNFVRTADDIAD--HESLPAQEKLDQLNRLEAELL--- 69

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
                 P +V L   + +  L  ++  D++ A   D       +     HY    +  + 
Sbjct: 70  GDGDTQPEAVALRRALAERGLEPRHAQDLLTAFRMDVTKLRYENWDDLIHYCSYSAMPVG 129

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRE 210
                +   +R  A+         A  I   +      Y +  ++Y P D L   G+  E
Sbjct: 130 RFVLDVHGEDR--ATWAANDALCAALQINNHLQDCGKDYRKLNRVYVPRDALETAGVAVE 187

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVLKHA 267
              + ++S  +   ++  AE     L ++      +  D+        I      ++   
Sbjct: 188 ELGAAKSSPSLLACLRKLAERNEALLTQSASFSSQV-KDMRLGMEISVIDAFARRIVGLL 246

Query: 268 QNHGFKIVSHSHTPNQLVR 286
           + H    +      ++   
Sbjct: 247 KTH--DPLCEKVHLSKGEM 263


>gi|302537963|ref|ZP_07290305.1| squalene synthase HpnC [Streptomyces sp. C]
 gi|302446858|gb|EFL18674.1| squalene synthase HpnC [Streptomyces sp. C]
          Length = 226

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 69/225 (30%), Gaps = 5/225 (2%)

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L   +        G       P  + L  +VR + L  ++FL +IEA+  D         
Sbjct: 2   LDALEADLLRVFGGTDGPPRHPLLLALQPVVRDHRLSAEHFLGLIEANRQDQRVARYETY 61

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            +   Y    ++ +  L   +  +       R       A  + + +  +     R ++Y
Sbjct: 62  GELLGYCELSANTVGRLVLELTGTSTPERIRR-SDAVCTALQLVEHLQDVAEDLGRDRIY 120

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI- 255
            P + +    +      +      +   I   AE     L +    +  +   +      
Sbjct: 121 LPAEDMRRFHVAEADLGAPSAGASVRSLIAFEAERARDLLNEGTPLVGSVHGRLRLLLAG 180

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQ---LVRPWYMLSSSIKK 297
                 + L+     GF ++     P +   L     +L ++ +K
Sbjct: 181 FTGGGRAALRAVAAAGFDVLPGPPKPTRSLLLREVAAVLRTAPRK 225


>gi|22296799|gb|AAM94363.1| phytoene synthase [Agromyces mediolanus]
          Length = 303

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 75/285 (26%), Gaps = 27/285 (9%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI-TRDMRLQWWKDI 83
            R +R       LA  L  P  R  L+ +Y        + D           R +   D 
Sbjct: 31  ARVIRAYSTSFGLASRLCSPAVREHLAEVYALVRIADELVDGPAEEAGLPCERRRELLDA 90

Query: 84  FESS--TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
            E+          S +          R+     +       +   D    +  + ++ + 
Sbjct: 91  LEADTEAAFESGYSANLVVHAFARAARRSGFGQELTRPFFASMRRDLEPIAFTEERELDE 150

Query: 142 YAFRISSRLIHLATM------ILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQ 194
           Y +  +  +  +           D+ER +   R  +  G A      +  L      RG+
Sbjct: 151 YVYGSAEVVGLMCLRGFAIGLAPDAERDARWERGARALGSAFQRVNFLRDLGEDASLRGR 210

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            YFP       G+D  SF   Q             +     L +A   +  +      A 
Sbjct: 211 RYFP-------GVDPVSFSEAQ--------QLRLLDGIDAELDEAAAVIPELPRGCRVAV 255

Query: 255 IPV-SITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKK 297
                +   +    +      +V+         +   +     + 
Sbjct: 256 AAAHGLFGELSARLRRTPAAELVTRRVRVPAPRKLAIVTRVVARG 300


>gi|319442459|ref|ZP_07991615.1| phytoene synthase [Corynebacterium variabile DSM 44702]
          Length = 283

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/287 (9%), Positives = 63/287 (21%), Gaps = 33/287 (11%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR-----DMRLQW 79
              +        LA  L  P  R  +  LY        + D A              L  
Sbjct: 7   AEVIAGYSTSFTLATRLLSPPVRRDVCNLYAVVRIADEIVDGAAESAGEDATGIRTLLDT 66

Query: 80  WKDIFESSTKGL-IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           ++D    +      A    P         R+  L   +      +   D       D   
Sbjct: 67  YEDTVLGAADPTAPAFHTDPVLHAFAGTARRCHLDPAHLRAFFASMRADLDPGVHDD-AS 125

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVI-----KYAGIAQFIGQLICQLPIHYHR- 192
              Y    +  +  +   I  +     +            G A      +  +       
Sbjct: 126 LAEYVHGSAEVIGLMCLDIFRTHGDVTADPQWLAEGAASLGSAFQKVNFLRDIGADITVL 185

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
            + Y P                G  ++    A     +  +  L      +  +      
Sbjct: 186 HRHYLPTAS------------DGTLTEHAKNA---LLDECVVELDAGCSRIPALPRGTRA 230

Query: 253 -AFIPVSITESVLKHAQNHGFKIVSH----SHTPNQLVRPWYMLSSS 294
                 ++  +++   +      ++       +    V+    L ++
Sbjct: 231 GVAAAAALYRALVDRLRETPAADLTGADAVRVSVPTRVKTVVTLRAA 277


>gi|300022797|ref|YP_003755408.1| squalene/phytoene synthase [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524618|gb|ADJ23087.1| squalene/phytoene synthase [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 278

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 94/288 (32%), Gaps = 13/288 (4%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
             +E   + ++  V  + R    DRY A L +P   R  L  L  F  E+ R+     + 
Sbjct: 3   EPQEATANANADAVRASARLNAPDRYYAALFAPVSVRDDLIALAAFDGEIARIGQIVSDA 62

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
              ++R+ WW+D    S       S +P   +   ++R+ +L        +EAH    + 
Sbjct: 63  ALGEIRVAWWRDALLGSGD-TSNLSGNPILDQFADVMRRRELSRPALDAYLEAHMAALFA 121

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
           D   D    E     I    +  A  IL      A   +   A  A  + ++   LP   
Sbjct: 122 DPPADDAALEKSFRVIDGTPLAFALQILHGPADDAGPLIN-AASRASGLTRVARTLPNAL 180

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
             G+   P           E+ +           I   A      L   + +++      
Sbjct: 181 AAGRTPLP-----------EARIPVPPDTDWRPQIAWLAREARSSLALVQSDLKGKTRAF 229

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             A +P+++ E   +  Q  G+           L R W +  +     
Sbjct: 230 TTALLPLALIEPYFRALQKPGYDPSRDIMDIAPLARLWRIARAHWTGT 277


>gi|227833952|ref|YP_002835659.1| putative phytoene synthase [Corynebacterium aurimucosum ATCC
           700975]
 gi|262184952|ref|ZP_06044373.1| putative phytoene synthase [Corynebacterium aurimucosum ATCC
           700975]
 gi|227454968|gb|ACP33721.1| putative phytoene synthase [Corynebacterium aurimucosum ATCC
           700975]
          Length = 285

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 70/278 (25%), Gaps = 22/278 (7%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                 + +R       LA  L  P  R+ +  LY        + D   +P      L  
Sbjct: 15  AEAAAAQIMRHYSTSFSLATRLLQPRVRVDIRNLYAMVRTADEIVDAGLDPHDAAALLDA 74

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           ++    +           P         R+    +++  +   +   D    S      F
Sbjct: 75  YETTVRN--APSQRFHADPVVHAYALSARRCGFQDEHIAEFFASMRCDLTRTSH-TADSF 131

Query: 140 EHYAFRISSRLIHLATMILD--SERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLY 196
           + Y    +  +  L        + R +      +  G A      +  L       G+ Y
Sbjct: 132 KTYVRGSAEVIGLLCLDTFYAGAPRPTGVEEGAERLGAAFQKINFLRDLHEDSTVLGRAY 191

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFI 255
           FP        L     L  +    I   I+         L  AR  M  +          
Sbjct: 192 FPT-------LREPDKLDEETKAAIIADIRE-------DLVHARTAMDLLPLSSRVGVAA 237

Query: 256 PVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLS 292
             ++   +    +      I++   +     +   +  
Sbjct: 238 AAALFTELTDLLEATPAHEIMTTRVSVPTARKAVLISR 275


>gi|326402292|ref|YP_004282373.1| putative squalene/phytoene synthase [Acidiphilium multivorum
           AIU301]
 gi|325049153|dbj|BAJ79491.1| putative squalene/phytoene synthase [Acidiphilium multivorum
           AIU301]
          Length = 278

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 73/256 (28%), Gaps = 9/256 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +   L     R  +   Y F      + D     P  +  RL   + + +   
Sbjct: 15  RGDENFPVGSWLIRAGLRRHVHAYYAFARNADDIADHPDLAPAEKIARLNAMEAVLDGD- 73

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                 + SP +  L   + + ++   +  +++ A   D+         +   Y    ++
Sbjct: 74  ----DPTRSPSAARLRESLAETNVDPVHARELLVAFRQDATKTRYASWDELMRYCRYSAA 129

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +    R S           +  +   +      +    + Y P D L AVGL
Sbjct: 130 PVGRYVLDLHGESRQSWPA--SDALCASLQVLNHLQDCAKDFDTLDRSYIPGDWLQAVGL 187

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
             ++  +      +        +   +   KA     +++         + +  +   H 
Sbjct: 188 GPDAVTAKATPPALRSVFDAMLKRTAELNAKAARLPGFVVARGLRVETAIIVGLARRLHR 247

Query: 268 QNHGFKIVSHSHTPNQ 283
           +      ++      +
Sbjct: 248 RLLREDPLAGRVKLRR 263


>gi|56551765|ref|YP_162604.1| squalene synthase HpnC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762395|ref|ZP_04760474.1| squalene synthase HpnC [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|56543339|gb|AAV89493.1| squalene synthase HpnC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373082|gb|EER62731.1| squalene synthase HpnC [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 297

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 86/271 (31%), Gaps = 10/271 (3%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
           D +  +A  L  P YR  +   Y F  +   V D      ++  RL   +D+  S T   
Sbjct: 33  DENFPVASFLINPEYRPIIMAFYQFARQADDVADNV--IASKKDRLAILEDMRSSLTGES 90

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
            +E  +    + L      D    + LD++EA   D   +   +      Y    +S + 
Sbjct: 91  QSEPNAVVLRQTLIT-HGLDHTIVHGLDLLEAFRRDVSVNRYENWDALMDYCRYSASPVG 149

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRE 210
                +    R      +      A  +   +      Y    ++Y P DI+ AVG    
Sbjct: 150 RFVLDVHKESRN--LWPMNDALCTALQVINHLQDCGKDYRMMNRIYIPSDIMEAVGATAG 207

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKHAQ 268
                  S  +  AI+  A      L ++      I        + V   + ES+ +   
Sbjct: 208 DLGRFHASLPLRQAIETAALKTKSLLKRSSGFSAAIHDKRLGVEVAVIQRLAESLTECLT 267

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            H    +S     N+         ++  + F
Sbjct: 268 KH--DPLSERVHHNKAETLGLAFVAAAGRLF 296


>gi|319779474|ref|YP_004130387.1| Phytoene synthase [Taylorella equigenitalis MCE9]
 gi|317109498|gb|ADU92244.1| Phytoene synthase [Taylorella equigenitalis MCE9]
          Length = 286

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 86/273 (31%), Gaps = 9/273 (3%)

Query: 29  RDIDYDR--YLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
           +        + A L      + S+  LY    ++  +  T  +     ++L WWKD  E 
Sbjct: 17  KTYSTSSPEHFAYLYLAEDKKNSVRTLYALFNDIKNILYTQSDSNIARIKLSWWKDAIEK 76

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                      P      SI  ++++  Q+ L++IE+   D  ++   + +    +    
Sbjct: 77  LYLEKSNSVNHPLLFAFNSIKNKHNINLQFLLNVIESVEMDLTHNRYLEFRSLNKFHALQ 136

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           S  +    + IL S +        +  G       +I ++ I   +G++Y P++ L    
Sbjct: 137 SGSIFSAVSQILGSTKPDVIK-HAQNLGEFLHFVDMISEMGIDASQGRIYVPMEYLRKHE 195

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD----VFPAFIPVSITES 262
           +    FL        S               +  +    + P+    + P      + E+
Sbjct: 196 ITASDFLKATPKVINSPLKDFLILEASAKSNEVLKLYEALPPEEKKNLRPLKALRLMGEA 255

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            LK  +        +      L          +
Sbjct: 256 KLKKIKK--GDPFKNEIALTPLHMLMISSRVWL 286


>gi|54023703|ref|YP_117945.1| putative phytoene synthase [Nocardia farcinica IFM 10152]
 gi|54015211|dbj|BAD56581.1| putative phytoene synthase [Nocardia farcinica IFM 10152]
          Length = 394

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 71/229 (31%), Gaps = 16/229 (6%)

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESISP-----FSVELLSIVRQYDLPNQYFL 118
            D +  P                       +   P         L   V +Y +  Q+F 
Sbjct: 139 ADGSTTPGAPFPAAAEHDRTHADRPARAALDPRLPAEWPHVLAALADTVARYAIAPQHFW 198

Query: 119 DMIEAHFFDSYNDS-----IFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKY 172
             +++   D            D  +   Y    ++ +   +  ++      +A+      
Sbjct: 199 TFLDSMRMDVPGSPTFRARYADMAELREYMRGSAAAIGLQMVPVLGTVGPRAAAEPAAAA 258

Query: 173 AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIF 228
            G A  +   +  +     RG++Y P   L A G+  E       +G    R+  A+   
Sbjct: 259 LGEAFQLTNFLRDVAEDLDRGRVYLPAAELAAFGVTDELLGHCRATGHTDPRVRRALAHL 318

Query: 229 AELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVS 276
             +      +A   +  + P V PA     ++  ++L   ++ G+ + +
Sbjct: 319 IAVNRDLYRRAAPGVDLLTPRVRPAIRTASALYAAILDRIEDSGYAVFT 367



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 17/54 (31%)

Query: 17 FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
           +       R   D     +LA  L  P  R ++  LY F   +  + D     
Sbjct: 14 LAPAYRTCRRIAADHGRTYFLATRLLTPAQRPAVHALYAFARLVDDIVDVPGPA 67


>gi|254450891|ref|ZP_05064328.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
 gi|198265297|gb|EDY89567.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
          Length = 241

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 86/272 (31%), Gaps = 35/272 (12%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
                  +   D DR+LA + +P   R  L  +Y F+ E+ R       P+  +MRLQWW
Sbjct: 3   FEACAGIVERGDPDRFLAVMAAPVAARRVLFPIYAFNVEVARAPWVTEEPMIAEMRLQWW 62

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           +D  E    G         ++ L  +V       +    ++ A  +D Y D   D + F 
Sbjct: 63  RDALEEMASGGTV-RRHEVTLPLADMVD--GDGARALDRLVAARRWDVYKDGFEDAEHFN 119

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            Y    +  L+      L +      L      G A  + + +  +     +G++     
Sbjct: 120 EYLDATAGELMWQGARALGAVNREDVL----RFGRAAGLARYLAAVAALEEKGRVPLL-- 173

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSIT 260
                             D    AI   A   L  + +              AF+     
Sbjct: 174 ------------------DGRESAIAELAREALNNIAR--------PVPNNAAFLEAWQA 207

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           E +L+      +++   +   +       +L 
Sbjct: 208 EPILRQIAKEPWRVAQGTVGLSPFRAKLRLLR 239


>gi|114765794|ref|ZP_01444889.1| hypothetical protein 1100011001350_R2601_23785 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541901|gb|EAU44937.1| hypothetical protein R2601_23785 [Roseovarius sp. HTCC2601]
          Length = 258

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 96/282 (34%), Gaps = 27/282 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D     + +   D DR+ A + +P   R  L  LY F+ E+ R     +  +  +MR
Sbjct: 3   FDDDLTACAQLVERGDPDRFAAAMAAPVRARAVLFPLYAFNLEVARAPWLTQESMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D  E    G +          L  ++            ++ A  +D Y D+  D 
Sbjct: 63  LQWWRDALEEIRAGGLV-RRHEVVTPLAHVLDA--DSAGRLDRLVGARRWDIYRDAFEDE 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
             F  Y    S  L+  A              V   AG A  + Q +  +P    +G++ 
Sbjct: 120 AHFTRYLEETSGELVLAAGRA----LGEMPEDVALDAGYASGLAQFLRAVPELEDKGRVP 175

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
                                 D    A+   A+ GL  L +AR  +  +      A + 
Sbjct: 176 LV--------------------DGRPEAVVALAKEGLARLDRARARLGEVDTPARAALLA 215

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                 +LK A     ++       ++  R   ++ +++  R
Sbjct: 216 GWQAGPLLKQAVQAPQRVAEGMLQLSEFRRRTGLMRAALTGR 257


>gi|290974259|ref|XP_002669863.1| predicted protein [Naegleria gruberi]
 gi|284083416|gb|EFC37119.1| predicted protein [Naegleria gruberi]
          Length = 353

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 112/337 (33%), Gaps = 58/337 (17%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYR-ISLSFLYYFHTELMRVR 64
           +TK +++E +           +L+ I+ ++Y   LL     +   L+ L+  + EL  ++
Sbjct: 7   ITKTSKEEFQTIMTTL---RNHLKTINPEQYSIALLQKDEIQVNILTILFCLNAELATIK 63

Query: 65  DTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIV------------RQYDL 112
           D  + P T  +RL WWKD  ++    +      P  + L  +               Y  
Sbjct: 64  DFTKTPSTGLLRLSWWKDQVKN--ALVGLPPRVPVLMALSFMQVNYFNKGFTCLNDNYQQ 121

Query: 113 PNQ------------------------------YFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             +                              +  ++ +    D            E Y
Sbjct: 122 EQEQSNINTSTTSNTTGSTSTTSTQNNNSLKFSHLRNIFKWREVDLKWKQPATLADIESY 181

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
           +  + S LI ++ +     R   +  V  + G +  I  L+  +P        Y P  + 
Sbjct: 182 SEGVYSTLI-MSHLQCSKYRDVHTDHVASHLGRSYGICTLLRSVPHLSEHQSTYLPAQLC 240

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR---------YILPDVFPA 253
              G+  +     QNS  +   +   A+L   +L  ARE             + P  +P 
Sbjct: 241 AKYGITEDDIYKHQNSHELEEVVFKVADLAKSHLDLARELADLKDEKTNKLLVNPKAYPL 300

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           F+   + E  L+  +   F I   S    QL   +Y+
Sbjct: 301 FMTSIVCEVFLEKLEKVNFNIFHPSIGAQQLRFQFYL 337


>gi|316932973|ref|YP_004107955.1| squalene synthase HpnC [Rhodopseudomonas palustris DX-1]
 gi|315600687|gb|ADU43222.1| squalene synthase HpnC [Rhodopseudomonas palustris DX-1]
          Length = 292

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 74/260 (28%), Gaps = 14/260 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  +  P +R  +   Y F      + D A  +  T+   L   +       
Sbjct: 13  HRDENFPVASWIIHPRHRDLILAFYNFVRTADDIADHAMLDAGTKLEYLDLLEAELLGRG 72

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +          ++ L   + +  +P ++ LD++ A   D       D  +  HY    + 
Sbjct: 73  ETQAE------ALHLRRALAERGMPPRHALDLLTAFRMDVTKLRYEDWDEVIHYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +      +A+            I   +      Y    ++Y P D+L A G 
Sbjct: 127 PVGRFM--LDVHGESTATWPASDALCAGLQINNHLQDCGKDYRTLNRVYLPRDVLDAAGA 184

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
             E     ++S  +   +   A      L   R     I  D         I ++     
Sbjct: 185 AVEDLGQPKSSPALLKCLHGLAVRTATLLGDGRPLAAEI-KDFRLGLEVSVI-QAYADRI 242

Query: 268 QN--HGFKIVSHSHTPNQLV 285
                    +S       + 
Sbjct: 243 VRMLQTRDPLSERVHLKPIE 262


>gi|114327619|ref|YP_744776.1| phytoene synthase family protein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315793|gb|ABI61853.1| phytoene synthase family protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 273

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 10/240 (4%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            +R  D DR+ A L + P  R SL  LY  + EL+R R+ A  PI   +RLQWW+++ E 
Sbjct: 16  VVRRYDPDRFFASLFAAPDRRESLMLLYALNHELVRAREVASTPIVALIRLQWWREVVEG 75

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
                  E     +  L + ++   L  +  L +IEA   D+      D     HY  + 
Sbjct: 76  ------VEKRHELATPLGAALKAGQLDREGLLALIEAREADTEES-FPDSLTLWHYLEQT 128

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
           + ++  LA  IL + +       ++  G    +  ++  +  H  +G++  P+  L A G
Sbjct: 129 AGQVAVLAGQILGAGKQEQVR--LRRLGAVYGLAGVVHGVCAHAAQGRVLVPVAELHAAG 186

Query: 207 LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKH 266
           L+ E+  S  +      A      L  +   + R     +      A +P  +    L  
Sbjct: 187 LEPEALTSAPHEAGNIAAGP-LQALATEGQRRLRLCRGRVGRGWMAAALPAVLARRDLAR 245


>gi|29830463|ref|NP_825097.1| phytoene synthase [Streptomyces avermitilis MA-4680]
 gi|29607575|dbj|BAC71632.1| putative squalene/phytoene synthase [Streptomyces avermitilis
           MA-4680]
          Length = 328

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 72/278 (25%), Gaps = 5/278 (1%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACL-LSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
             RD     R L   +   Y A   L P   +  L     F      + D  R    R  
Sbjct: 19  LRRDYTTAARRLLTRETAGYAAVRALLPARLQPHLVAATAFSCATDDIVDAERPVAVRTA 78

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
               W++     T      S  P            +      L+ +E    D        
Sbjct: 79  AFGRWREATR--TALDTGRSRFPVLRAYAHTAAVCEQSPGGVLEYLEGTAGDLEFTGFET 136

Query: 136 CKQFEHYAFR-ISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
              ++ Y  R     L+    +        A     +    A      +  L      G+
Sbjct: 137 EAAYQAYVDRLTLPFLMISTGLQYPGGGDPAVRARWRPFADASQRLDFLTDLHTDLRAGR 196

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
           L  P + L   G+        +++  +   I          L +A   +    PD  P  
Sbjct: 197 LCLPREDLTRHGVTVTDLAGARDTYGVRRLIAETCARTRAALTEAHGVLEIATPDYQPLV 256

Query: 255 IP-VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
              +S+ E  L   +  G  ++    +         +L
Sbjct: 257 RAGLSLWEHRLNEVERRGAAVLRRPVSTGIREPLSILL 294


>gi|32307542|gb|AAP79176.1| phytoene synthase [Bigelowiella natans]
          Length = 139

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 4/126 (3%)

Query: 172 YAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
             GIA  +  ++  +      R ++Y PLD L   GL     LSG+  DR    +K   +
Sbjct: 9   ALGIALQLTNILRDVGEDAQQRDRIYLPLDELAEFGLTEADILSGKVDDRWRDFMKFQIK 68

Query: 231 LGLKYLFKAREEMRYILPDVFPA-FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
              +Y   A+     + P V  A +    +   +L   + + +  ++      +  +   
Sbjct: 69  RAREYFAIAKN--ASLDPSVRWAVWGAGMVYGEILDAIEKNDYDNLNRRAYVPRWRKFQL 126

Query: 290 MLSSSI 295
           +  + +
Sbjct: 127 LPVALV 132


>gi|240138462|ref|YP_002962934.1| putative phytoene synthase [Methylobacterium extorquens AM1]
 gi|240008431|gb|ACS39657.1| putative phytoene synthase [Methylobacterium extorquens AM1]
          Length = 299

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 81/270 (30%), Gaps = 21/270 (7%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P YR ++   Y +      V D    +P  +   L    D      
Sbjct: 17  QHDENFPVASHLIHPRYRGAILAFYNYVRAGDDVADHTGLSPERKIEMLDALADALTGKG 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P    L   +  +  P  + L++++A   D+      D  +  HY    + 
Sbjct: 77  G------SDPTVEPLKRELAAHRQPPTHALELLDAFRMDARKSRYADWDELIHYCRYSAM 130

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +   +  +   R       A  +   +      +    ++Y PLD++   G 
Sbjct: 131 PVGRFLLDVHGEDP-ARVYRTSDAICAALQVLNHLQDCGKDFRDLDRVYIPLDVMRKHGA 189

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA------FIPVSITE 261
           D     + + S ++   I+  AE  L  L +       I              + V +T+
Sbjct: 190 DVSMLGADRASPQLRAVIRELAERTLVLLDEGAPLPNQIDDLRLSLEIAAIHRLAVVLTK 249

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +L          +S      +       L
Sbjct: 250 GLLTR------DPLSEKVHHGKAAFALTAL 273


>gi|288958300|ref|YP_003448641.1| squalene/phytoene synthase [Azospirillum sp. B510]
 gi|288910608|dbj|BAI72097.1| squalene/phytoene synthase [Azospirillum sp. B510]
          Length = 290

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/266 (12%), Positives = 85/266 (31%), Gaps = 9/266 (3%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
           +  +A  L P   R  +   Y F      + D     +  + +L + + +  + T G   
Sbjct: 26  NFPVASRLIPKHLRPHVIAFYRFVRLADDIADDPD--LEPETKLAYLEALERALTSGQAK 83

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
            +    +++L   +++  + +++   ++ A   DS             Y    ++ +   
Sbjct: 84  HAYLKPAIDLKESLQKTGVSDRHARQILRAFRRDSVGARCHSWSDLLLYCRFSANPVGR- 142

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESF 212
             ++      +A+         A  +   +      + + G+ Y PL      G+  E  
Sbjct: 143 -YLLDLHGEGAAAGPASDALCSALQVLNHLQDAREDWTQLGRCYIPLAWFDETGISVERL 201

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS--ITESVLKHAQNH 270
           +  ++  R+ +      E   + L +A      I          V   + ES+ +  ++ 
Sbjct: 202 VEVESDARLRVIFDQALEQTDRLLERAAALPGLIRHRGLRMEAAVILSLAESLARRLKSR 261

Query: 271 GFKIVSHSHTPNQLVRPWYMLSSSIK 296
               +    T     +   +     +
Sbjct: 262 --DPMKARVTLGAHHKLAAVARGLAR 285


>gi|260752664|ref|YP_003225557.1| squalene synthase HpnC [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552027|gb|ACV74973.1| squalene synthase HpnC [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 297

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 86/271 (31%), Gaps = 10/271 (3%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
           D +  +A  L  P YR  +   Y F  +   V D      ++  RL   +D+  S T   
Sbjct: 33  DENFPVASFLINPEYRPIIMAFYQFARQADDVADNV--IASKKDRLAILEDMRSSLTGES 90

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
            +E  +    + L      D    + LD++EA   D   +   +      Y    +S + 
Sbjct: 91  QSEPNAVVLRQTLIN-HGLDHTIVHGLDLLEAFRRDVSVNRYENWDALMDYCRYSASPVG 149

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRE 210
                +    R      +      A  +   +      Y    ++Y P DI+ AVG    
Sbjct: 150 RFVLDVHKESRN--LWPMNDALCTALQVINHLQDCGKDYRMMNRIYIPSDIMEAVGATAG 207

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKHAQ 268
                  S  +  AI+  A      L ++      I        + V   + ES+ +   
Sbjct: 208 DLGCFHASLPLRQAIETAALKTKSLLKRSSSFSVAIHDKRLGVEVAVIQRLAESLTECLT 267

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            H    +S     N+         ++  + F
Sbjct: 268 KH--DPLSERVHHNKAETLGLAFVAAAGRLF 296


>gi|163851368|ref|YP_001639411.1| squalene synthase HpnC [Methylobacterium extorquens PA1]
 gi|163662973|gb|ABY30340.1| squalene synthase HpnC [Methylobacterium extorquens PA1]
          Length = 299

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 81/270 (30%), Gaps = 21/270 (7%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P YR ++   Y +      V D    +P  +   L    D      
Sbjct: 17  QHDENFPVASHLIHPRYRGAILAFYNYVRAGDDVADHIGLSPERKIEMLDALADALTGKG 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P    L   +  +  P  + L++++A   D+      D  +  HY    + 
Sbjct: 77  G------SDPTVEPLKRELAAHRQPPTHALELLDAFRMDARKSRYADWDELIHYCRYSAM 130

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +   +  +   R       A  +   +      +    ++Y PLD++   G 
Sbjct: 131 PVGRFLLDVHGEDP-ARVYRTSDAICAALQVLNHLQDCGKDFRDLDRVYIPLDVMRKHGA 189

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA------FIPVSITE 261
           D     + + S ++   I+  AE  L  L +       I              + V +T+
Sbjct: 190 DVSMLGADRASPQLRAVIRELAERTLVLLDEGAPLPNQIDDLRLSLEIAAIHRLAVVLTK 249

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +L          +S      +       L
Sbjct: 250 GLLTR------DPLSEKVHHGKAAFALTAL 273


>gi|322371735|ref|ZP_08046278.1| Squalene/phytoene synthase [Haladaptatus paucihalophilus DX253]
 gi|320548620|gb|EFW90291.1| Squalene/phytoene synthase [Haladaptatus paucihalophilus DX253]
          Length = 356

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 81/300 (27%), Gaps = 40/300 (13%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D  +  + ++ +     +   L       ++   Y        + D    P     RL
Sbjct: 16  EADLEWCHQAVQGVSRTFAITIDLLDAPMADAICVGYLLCRVADTIEDAGHIPPAEQTRL 75

Query: 78  QWWKDIFESSTKGLIAESISP-----------------FSVELLSIVRQYDLP------- 113
            +  D     T     +                            IV  +D         
Sbjct: 76  LYQYDAVLDPTDSTTIDEFREDVDEWIPDDDGDDADWSVVAHAPRIVATFDTCSPSVRNA 135

Query: 114 -NQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
                 +++                 I    + E Y + ++  +  L T ++  +  SA 
Sbjct: 136 VRPPVRELVGGMAMFVERHADEGGLRIGTRAELEEYCYYVAGTVGELITNLVCRDADSAQ 195

Query: 167 LRVIKY----AGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
              ++       +   +  +   + + YH    +Y P   L    + ++     ++SD +
Sbjct: 196 ANRLRETSESFALLLQLVNVTKDVYVDYHDENNVYLPETWLEDADVPQDDLCDPEHSDDV 255

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILPDV--FPAF--IPVSITESVLKHAQNHGFKIVSH 277
           +  ++  A+    +   A+  +  +  +         IP  +    L+  +      +  
Sbjct: 256 AAVVERTADHAHSFTDDAQTYLESMPRERGNRLVAWTIPYLLAVGTLREVRKRPEDALRR 315


>gi|260942447|ref|XP_002615522.1| hypothetical protein CLUG_04404 [Clavispora lusitaniae ATCC 42720]
 gi|238850812|gb|EEQ40276.1| hypothetical protein CLUG_04404 [Clavispora lusitaniae ATCC 42720]
          Length = 355

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 101/348 (29%), Gaps = 57/348 (16%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           +++      +        V   L   D   YL     P   R +   +  F  E+ ++  
Sbjct: 9   VSRGHYTYAQQLHSAVENVNVLLEQNDRSSYLLAQYIPEPARTAFMAIRAFGLEVNKISS 68

Query: 66  TARNPITRD-MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQY-DLPNQYFLDMIEA 123
           T R  +    ++ ++W D+  S+  G       P +  L     +  +L    FL  ++ 
Sbjct: 69  TQRTGMAAADLKFKFWSDLVSSAFAGRATGE--PVAFLLRDAADRGLNLDAAPFLQFLQT 126

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMI---------------LDSERYSASLR 168
                        +    Y     S+L +    +                          
Sbjct: 127 RRHFLRTPQFASAEAICSYGEGTYSQLNYAVQGLLLSPGISPSSIELLESSPHLQKEVGD 186

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS-----------GQN 217
           V  + G A  +  ++  LP +  R  +  P+DI+   GL +E+ L               
Sbjct: 187 VAAHIGQATAVASMLLGLPYYASRDIVTVPVDIMAKNGLSQENTLRLVQGHLEGNEQKHA 246

Query: 218 SDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA------------------------ 253
            +++   +   A     ++  AR ++  +  ++                           
Sbjct: 247 REQLQNVVYETAVFANDHILSARRKLAQLPDEIRKVVESKPDGLLPRQSKRWRRGLPDAL 306

Query: 254 ---FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              F+    T   L+  + H F ++S      +    W    S  ++ 
Sbjct: 307 FTPFMSAIPTALYLRKLEKHDFDVLSPKLQQKEWRLAWTSFKSYYRRT 354


>gi|50409224|ref|XP_456848.1| DEHA2A11924p [Debaryomyces hansenii CBS767]
 gi|49652512|emb|CAG84823.1| DEHA2A11924p [Debaryomyces hansenii]
          Length = 388

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 54/368 (14%), Positives = 104/368 (28%), Gaps = 79/368 (21%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           + N   +      D       L   D   Y+     P   R +   +  F+ E+ ++ D 
Sbjct: 23  SNNYDLQLHSAREDIN---SLLEVHDRSSYILAQYIPEPARDAFLAIRAFNLEINKINDG 79

Query: 67  ARNPI-----------------TRDMRLQWWKDIFESSTKGLIAESI--SPFSVELLSIV 107
             N                   T D++ ++W D+         +E     P ++ +   +
Sbjct: 80  GNNTNSVSSKASNQLSGSMGISTTDIKFKFWSDLLSRVFTDPSSEKNLGEPIAILVRDAL 139

Query: 108 R-QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMI--------- 157
           R   +L   YF   ++         S         Y     S+L +L   +         
Sbjct: 140 RNDLNLDLSYFHQFLQTRKHFLQTKSFQTVNDICSYGEGTYSQLNYLTQGLLLSPSISPS 199

Query: 158 ------LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRE 210
                   +   S    +  + G A  IG +I  L  +   R Q+  P+D++    L +E
Sbjct: 200 AISLLEHSTSLQSKVSDIAAHIGQATAIGSMILGLKYYSSTRNQVTLPIDLMTKFDLSQE 259

Query: 211 SFLS------------GQNSDRISLAIKIFAELGLKYLFKAR------------------ 240
           S L                 +++       A +   ++  AR                  
Sbjct: 260 SVLRLTQGHLKDEKDISDVREKLKNITYETAVIANDHILSARDKLDKSREEILSIVKSHP 319

Query: 241 ----------EEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                        + I   VF  F+    T   L+  + + F I        +    W  
Sbjct: 320 NDQVLQKHQKRWRKNIPDVVFTPFMVAIPTTLYLQKLEKYDFDIFHPKLQQQEWRLAWTS 379

Query: 291 LSSSIKKR 298
             +  ++R
Sbjct: 380 FRNYYQRR 387


>gi|30249906|ref|NP_841976.1| squalene and phytoene synthase [Nitrosomonas europaea ATCC 19718]
 gi|30180943|emb|CAD85869.1| Squalene and phytoene synthases [Nitrosomonas europaea ATCC 19718]
          Length = 350

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 77/316 (24%), Gaps = 43/316 (13%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
            D  +    L+ +     L     PP  R  +   Y     +  V D +   + +   L 
Sbjct: 12  DDVRYQEHILQGVSRTFALTIPQLPPALREVVGNAYLLCRIVDTVEDDSALTLEQTRELA 71

Query: 79  W--------------WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
                          +              +         S++R     N      +E  
Sbjct: 72  EMFIEVVSGTVEAETFARALYPLLSEHTIPAEHDLIKHTPSVIRMTHSFNPVQRQALERC 131

Query: 125 FFDSYNDS-----------IFDCKQFEHYAFRISSRLIHLATMILD------SERYSASL 167
                              + +  + + Y + ++  +  + T +        ++   A +
Sbjct: 132 IRIMGQGMAAYQESESLSGLENLAEMDRYCYHVAGVVGEMLTELFCDYSPEINQHKPALM 191

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
           ++    G    +  ++  +     RG  + P DI    G D      G         +  
Sbjct: 192 QLSVSFGQGLQMTNILKDIWEDRKRGACWLPRDIFLQEGFDLNDLQPGCPERGFHAGLGT 251

Query: 228 FAELGLKYLFKAREEMRYIL-------PDVFPAFIPVSITESVLKHA-QNHGFKIVSHSH 279
              +   +L  A      I             A     +    L        F I     
Sbjct: 252 LIGIAKTHLQNALAYTCLIPSHEAGVRRFCLWAIGMAVL---TLNKINHKRDF-ITGREV 307

Query: 280 TPNQLVRPWYMLSSSI 295
             ++      +L +S+
Sbjct: 308 KISRRSVRATVLITSL 323


>gi|220926884|ref|YP_002502186.1| squalene synthase HpnC [Methylobacterium nodulans ORS 2060]
 gi|219951491|gb|ACL61883.1| squalene synthase HpnC [Methylobacterium nodulans ORS 2060]
          Length = 294

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 85/269 (31%), Gaps = 13/269 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P +R  +   Y F      V D +  +P  +   L    D      
Sbjct: 13  HRDENFPVASHLVHPRHRGPILAFYNFVRAGDDVADHSDLSPERKIALLDGLADALTG-- 70

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
               A    P +  L + +    LP  + L++++A   D+         +  HY    + 
Sbjct: 71  ----AGPADPEAAALKAALAGRGLPPCHALELLDAFRMDARKSRYATFDELMHYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +   +  +A+         A  I   +      + +  ++Y P D+L   G+
Sbjct: 127 PVGRFVLDVHGEDP-AATWAASDAICAALQIINHLQDCGKDFRQLDRVYLPQDLLATHGV 185

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLK 265
           D  +  + + S  +   I   A   L  L + R     I        I     +  ++ +
Sbjct: 186 DVAALGAERASPALRAVIGTLAHRCLDLLHEGRALPDLIEDTRLSLEIAAIHRLAVALAR 245

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
                    +S      +       LS++
Sbjct: 246 GLTAR--DPLSEPVHHGKAAFALIALSAA 272


>gi|254561126|ref|YP_003068221.1| phytoene synthase [Methylobacterium extorquens DM4]
 gi|254268404|emb|CAX24361.1| putative phytoene synthase [Methylobacterium extorquens DM4]
          Length = 299

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 81/270 (30%), Gaps = 21/270 (7%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P YR ++   Y +      V D    +P  +   L    D      
Sbjct: 17  QHDENFPVASHLIHPRYRGAILAFYNYVRAGDDVADHTGLSPERKIAMLDALADALTGKG 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P    L   +  +  P  + L++++A   D+      D  +  HY    + 
Sbjct: 77  G------SDPTVEPLKRELAAHRQPPTHALELLDAFRMDARKSRYADWDELIHYCRYSAM 130

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +   +  +   R       A  +   +      +    ++Y PLD++   G 
Sbjct: 131 PVGRFLLDVHGEDP-ARVYRTSDAICAALQVLNHLQDCGKDFRDLDRVYIPLDVMRKHGA 189

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA------FIPVSITE 261
           D     + + S ++   I+  AE  L  L +       I              + V +T+
Sbjct: 190 DVSMLGADRASPQLRAVIRELAERTLVLLEEGAPLPNQIDDLRLSLEIAAIHRLAVVLTK 249

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +L          +S      +       L
Sbjct: 250 GLLTR------DPLSEKVHHGKAAFALTAL 273


>gi|322711284|gb|EFZ02858.1| hypothetical protein MAA_02440 [Metarhizium anisopliae ARSEF 23]
          Length = 302

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 92/300 (30%), Gaps = 61/300 (20%)

Query: 55  YFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR----QY 110
             + EL+R+ +   NP+   +R+++W +  + +  G+      P  + L   ++    + 
Sbjct: 7   ALNLELVRLPEVVSNPVIGALRMKFWHESIDKTFAGMP--PREPICILLHQALQGLEARA 64

Query: 111 DLP-----NQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA 165
             P       +   +++                 E YA    S +++  T+     R   
Sbjct: 65  GSPTKKSIKFWVSRLVKTREKYMDGRPYPSLAALEDYAENTYSTMMY-TTLASMPLRSMH 123

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQ-----------------LYFPLDILGAVGLD 208
              +  + G A  I  ++  +P+    G+                 L  PLDI+   G+ 
Sbjct: 124 VDHLASHIGKACGIIAVLRGIPVLAAPGRPVKTPTGADAPPTREPSLLLPLDIMAEEGVK 183

Query: 209 RESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-------------------- 247
            E     G N+  +  A+   A     +L  ARE ++ +                     
Sbjct: 184 EEEVFRQGPNAPGLQDAVFKVATRANDHLITAREMLKRLKAGEDPGHEFEHEGEAEHIYL 243

Query: 248 ---------PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
                       F   +        L++ +   F   +          PW +  S   +R
Sbjct: 244 GENDTNKEIRQSFGVLLEAVPASHYLENLEKVNFDPFA--VKSGGWRLPWRIWQSLSSER 301


>gi|295395086|ref|ZP_06805295.1| phytoene synthase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972034|gb|EFG47900.1| phytoene synthase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 284

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 64/271 (23%), Gaps = 30/271 (11%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--ARNPITRDMRL 77
                 R +R       LA        R  +  LY        + D      P  +   +
Sbjct: 14  SYSVASRVIRGYSTSFSLATSALKNPDRDRIRALYAIVRITDEIVDGAAPAPPQDQLTLV 73

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
             ++D  ES+T+     S            RQ  +  + +    +A   D       D  
Sbjct: 74  NDFQDRLESATR--TGFSTDMPVHAFAHTARQCGITRELWAPFFDAMRSDIAGQPPLD-- 129

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVI---KYAGIAQFIGQLICQLPIHYHRGQ 194
             + Y    +  +  +   I       ASL+V    +  G A      +           
Sbjct: 130 -LDAYIHGSAEVVGLMCVRIFFRGAPPASLQVEEGARALGNAFQRINFLRDYGHDARVLN 188

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PA 253
             +    L                       +       + L  AR  +  +        
Sbjct: 189 RTYVAQELTD------------------QVKREEIARIRQKLAVARPAIDLLPGRARLGV 230

Query: 254 FIPVSITESVLKHAQNHGF-KIVSHSHTPNQ 283
            I   +   +    +     +++    +   
Sbjct: 231 LIAHDLFAELTDRIEQVPASELMRTRISVPP 261


>gi|302497379|ref|XP_003010690.1| hypothetical protein ARB_03392 [Arthroderma benhamiae CBS 112371]
 gi|291174233|gb|EFE30050.1| hypothetical protein ARB_03392 [Arthroderma benhamiae CBS 112371]
          Length = 305

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 88/306 (28%), Gaps = 73/306 (23%)

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPN 114
           + +T        MRLQ+W+D    +  G       P ++ L S +         +  +  
Sbjct: 2   IPETTSAHTIGLMRLQYWRDAITRTLAGTP--PKEPIAILLASALSDLDARTQGRAKISK 59

Query: 115 QYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAG 174
            + + +I A      + S       E YA    S L++L    L     +A   +  + G
Sbjct: 60  GWLMRLINAREQHLVHTSYPTLASLESYAESTYSTLLYLTLSALPLTSLTA-DHLASHIG 118

Query: 175 IAQFIGQLICQLPI------------------------HYHRGQLYFPLDILGAVGLDRE 210
            A  I  L+  +P+                           +G +  PLD++   G+  E
Sbjct: 119 KAAGITALLRGVPLVAFPPPPSHHSSQTRMGNEGPIAGDSRQGSIMLPLDVMAQTGVKEE 178

Query: 211 SFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILP--------------------- 248
                G ++  +  A+   A     +L  AR+ ++ +                       
Sbjct: 179 DVFRLGADAPGLRDAVFTVATRASDHLITARQMLKNLRAGQDVGHAFEHEGEEGHEYQDD 238

Query: 249 ----------------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                             F   +P   T   L   Q   F I            PW    
Sbjct: 239 QHEKSTSLSTQLQEVERGFCVLLPAVSTSLWLNKLQKVDFDIFKPELLSTDWRLPWKAYW 298

Query: 293 SSIKKR 298
           +  ++ 
Sbjct: 299 AYRQRN 304


>gi|218530176|ref|YP_002420992.1| squalene synthase HpnC [Methylobacterium chloromethanicum CM4]
 gi|218522479|gb|ACK83064.1| squalene synthase HpnC [Methylobacterium chloromethanicum CM4]
          Length = 299

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 81/270 (30%), Gaps = 21/270 (7%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P YR ++   Y +      V D    +P  +   L    D      
Sbjct: 17  QHDENFPVASHLIHPRYRGAILAFYNYVRAGDDVADHTGLSPERKIAMLDALADALTGKG 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P    L   +  +  P  + L++++A   D+      D  +  HY    + 
Sbjct: 77  G------SDPTVEPLKRELAAHRQPPTHALELLDAFRMDARKSRYADWDELIHYCRYSAI 130

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +   +  +   R       A  +   +      +    ++Y PLD++   G 
Sbjct: 131 PVGRFLLDVHGEDP-ARVYRTSDAICAALQVLNHLQDCGKDFRDLDRVYIPLDVMRKHGA 189

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA------FIPVSITE 261
           D     + + S ++   I+  AE  L  L +       I              + V +T+
Sbjct: 190 DVSMLGADRASPQLRAVIRELAERTLVLLEEGAPLPNQIDDLRLSLEIAAIHRLAVVLTK 249

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +L          +S      +       L
Sbjct: 250 GLLTR------DPLSEKVHHGKAAFALTAL 273


>gi|85716672|ref|ZP_01047641.1| squalene/phytoene synthase [Nitrobacter sp. Nb-311A]
 gi|85696512|gb|EAQ34401.1| squalene/phytoene synthase [Nitrobacter sp. Nb-311A]
          Length = 292

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 74/263 (28%), Gaps = 16/263 (6%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  +  P +R  +   Y F      + D A      +   L  ++       
Sbjct: 13  HRDENFPVASWVIHPRHRALILAFYNFVRTADDIADHAELGDKDKLAWLDLFESEL---- 68

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
             L      P +V L   + Q  +  ++ +D+++A   D              Y    + 
Sbjct: 69  --LGQGDSQPEAVNLREALAQRSMSPRHAIDVLKAFRMDVTKLRYETWDDVIDYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +        +            I   +      Y    ++Y P D L A G+
Sbjct: 127 PVGRFMLDVHGER--EETWVASDALCAGLQINNHLQDCAKDYKNLNRVYLPRDALAASGV 184

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVL 264
             E   + +    +   + + A      L + R     I  DV        I    + ++
Sbjct: 185 TVEMLRNDKAPPALLQCLHLLAGRTEALLNEGRPLAGEI-RDVRLGLEVAVIQMFADKIV 243

Query: 265 KHAQNHGFKIVSHSHTPNQLVRP 287
              +      +S +     L   
Sbjct: 244 ALLKVR--DPLSETVHLKPLQLL 264


>gi|126735697|ref|ZP_01751442.1| hypothetical protein RCCS2_17516 [Roseobacter sp. CCS2]
 gi|126714884|gb|EBA11750.1| hypothetical protein RCCS2_17516 [Roseobacter sp. CCS2]
          Length = 255

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 84/281 (29%), Gaps = 31/281 (11%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
             L     +   D  R+   + +P   R  L  LY F+ E+ R     +  +  +MRLQW
Sbjct: 2   SVLACAELVEKADPLRFRVAMAAPVPARQLLFPLYAFNVEVARAPWVTQEAMIAEMRLQW 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D  E   +G            L   +       +    ++ A  +D Y D+  D   F
Sbjct: 62  WRDALEEIAEGK-QPRKHEVVDALAGCLDAEG--ARCLDGLVAARRWDVYKDAFEDRGHF 118

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y    S  L+  A  +       A   V++    A  I      +P    + +     
Sbjct: 119 DDYINATSGSLMWTAARL----LGPADEGVVRDFAYATGIANFFQAIPALEAQSRKPLL- 173

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D    A+K  AE  L   ++AR     +      A I    
Sbjct: 174 -------------------DGTEAAVKALAEHALTRWYRARAASAQVSKAASAALIAGYH 214

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYM----LSSSIK 296
              +L+       ++   +   N            L    +
Sbjct: 215 ARPILRAVIAAPARVAQDALLVNPARDSLRFMNVNLRGWWR 255


>gi|302652100|ref|XP_003017910.1| hypothetical protein TRV_08076 [Trichophyton verrucosum HKI 0517]
 gi|291181495|gb|EFE37265.1| hypothetical protein TRV_08076 [Trichophyton verrucosum HKI 0517]
          Length = 305

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 88/306 (28%), Gaps = 73/306 (23%)

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPN 114
           + +T        MRLQ+W+D    +  G       P ++ L S +         +  +  
Sbjct: 2   IPETTSAHTIGLMRLQYWRDAITRTLAGTP--PKEPIAILLASALSDLDARTQGRAKISK 59

Query: 115 QYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAG 174
            + + +I A      + S       E YA    S L++L    L     +A   +  + G
Sbjct: 60  GWLMRLINAREQHLAHTSYPTLASLESYAESTYSTLLYLTLSALPLTSLTA-DHLASHIG 118

Query: 175 IAQFIGQLICQLPI------------------------HYHRGQLYFPLDILGAVGLDRE 210
            A  I  L+  +P+                           +G +  PLD++   G+  E
Sbjct: 119 KAAGITALLRGVPLVAFPPPPSHHSSQTRMGNEGPIAGDSRQGSIMLPLDVMTQTGVKEE 178

Query: 211 SFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYILP--------------------- 248
                G ++  +  A+   A     +L  AR+ ++ +                       
Sbjct: 179 DVFRLGADAPGLRDAVFTVATRASDHLITARQMLKNLRAGQDVGHAFEHEGEEGHEYQDD 238

Query: 249 ----------------DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
                             F   +P   T   L   Q   F I            PW    
Sbjct: 239 QHEKSTSLSTQLQEVERGFCVLLPAVSTSLWLNKLQKVDFDIFKPELLSTDWRLPWKAYW 298

Query: 293 SSIKKR 298
           +  ++ 
Sbjct: 299 AYRQRN 304


>gi|254438408|ref|ZP_05051902.1| hypothetical protein OA307_3278 [Octadecabacter antarcticus 307]
 gi|198253854|gb|EDY78168.1| hypothetical protein OA307_3278 [Octadecabacter antarcticus 307]
          Length = 241

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 92/273 (33%), Gaps = 35/273 (12%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+LA + +P   R  L  +Y F+ E+ R       P+  +MRLQW
Sbjct: 2   SFEACAGIVERGDPDRFLAVMAAPVAARRILFPIYAFNVEIARAPWVTSEPMIAEMRLQW 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D  E    G         +  L  ++       +    ++ A  +D Y D+  D   F
Sbjct: 62  WRDALEEIALGGTV-RRHEVTQTLADVLDVDG--ARALDRLVAARRWDVYTDAFEDAAHF 118

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y    +  L+      L +      +R  + AG+A    + +  +     +G+L    
Sbjct: 119 DEYLDATAGELMWQGARALGAVSREDVMRFARAAGLA----RYLKAVSALEEKGRLPLL- 173

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D    AI   A   LK + +             PAF+    
Sbjct: 174 -------------------DGRENAIAALAREALKDIAR--------PVPSNPAFLEAWQ 206

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            E +L+      +++   +   +     W +L 
Sbjct: 207 AEPLLRQIAKEPWRVAQGTVGISPFRAKWRLLR 239


>gi|239918587|ref|YP_002958145.1| phytoene/squalene synthetase [Micrococcus luteus NCTC 2665]
 gi|281415198|ref|ZP_06246940.1| phytoene/squalene synthetase [Micrococcus luteus NCTC 2665]
 gi|239839794|gb|ACS31591.1| phytoene/squalene synthetase [Micrococcus luteus NCTC 2665]
          Length = 298

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/285 (9%), Positives = 63/285 (22%), Gaps = 35/285 (12%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRDMRLQW 79
            + +R        AC   P   R  ++ +Y        V D        +       L  
Sbjct: 21  AQVIRRYSTSFSWACRTLPRQARQDVATIYAMVRVADEVVDGVAVAAGLDEAGVRAALDD 80

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           ++   E+        +  P       + R++ +  +       +   D         +  
Sbjct: 81  YERACEA--AMASGFATDPVLHAFADVARRHGITPELTRPFFASMRADLGIREHG-AESL 137

Query: 140 EHYAFRISSRLIHLATMIL---------DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
           + Y    +  +  +   +             +           G A      +  L   +
Sbjct: 138 DAYIHGSAEVVGLMCLQVFLSLPGTRARTPGQRQELRAQASRLGAAFQKVNFLRDLAADH 197

Query: 191 HR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           H  G+ Y P       G         +                   L  A   +R + P 
Sbjct: 198 HELGRTYLP-------GAAPGVLTEAR--------KAELVAEVRADLDAALPGIRVLDPG 242

Query: 250 V-FPAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLS 292
                 +   +  +++   +      +           +      
Sbjct: 243 AGRAVALAHGLFAALVDRIEATPAAELAHRRVRVPDHQKARIAAR 287


>gi|306836899|ref|ZP_07469853.1| phytoene synthase [Corynebacterium accolens ATCC 49726]
 gi|304567204|gb|EFM42815.1| phytoene synthase [Corynebacterium accolens ATCC 49726]
          Length = 284

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 66/287 (22%), Gaps = 25/287 (8%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
              S    + +        LA  L     R  +  LY        + D   +  + D   
Sbjct: 7   QAASRAAAQVMGQYSTSFSLATRLLRGRVREDIRHLYAVVRIADELVDGTADQASIDAAA 66

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
                               P         R+     ++ +   ++   D          
Sbjct: 67  ALDAYEAAILAAPEKRLHTDPVVHSYAITARRCGFQREHLVAFFDSMRADLNQREY-SAA 125

Query: 138 QFEHYAFRISSRLIHLATMILDSE------RYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
           +   Y +  +  +  L   +  +E        +A  R  ++ G A      +  L     
Sbjct: 126 ELAEYIYGSAEVIGLLCVQVFLAEETVSAADRAAMDRGARHLGSAFQKINFLRDLGEDSS 185

Query: 192 R-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
             G+ YFP     A G+  E             A         + L  A E +  +    
Sbjct: 186 VLGRAYFPQ---AAGGVLSE------------AAKSALIAEIRRELAAAEEAINLLPLSA 230

Query: 251 F-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSI 295
                    I   +           + +   +     + W    +  
Sbjct: 231 RVGVRAAADIFAELTNRLAATPAAELKTTRISVPNRTKAWLAARAVR 277


>gi|224046525|ref|XP_002198739.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 190

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 3/190 (1%)

Query: 59  ELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFL 118
            L +++D+     T  MR+Q+W+D  E            P + EL   V++++L   +F+
Sbjct: 4   WLRQIKDSISQKTTGLMRMQFWRDAVEDIYSDNP--PHQPVATELWRAVKRHNLTKMWFM 61

Query: 119 DMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQF 178
            +I+    +  + +  + ++ E YA    S L++L    L      A      + G AQ 
Sbjct: 62  KIIDEREKNLDDRAYRNIQELETYAENTQSALLYLTLETLGVRDIHA-DHAASHIGKAQG 120

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           I   +   P H  R +++ P+DI    G+ +E F+ G+    +   I   A     +L  
Sbjct: 121 IVTCLRATPYHCTRQKVFLPMDICMLHGVSQEDFIRGKQEKNVRDVIYDIASQAHIHLEH 180

Query: 239 AREEMRYILP 248
            R    Y+  
Sbjct: 181 VRFLSFYLSK 190


>gi|71082829|ref|YP_265548.1| phytoene synthase [Candidatus Pelagibacter ubique HTCC1062]
 gi|71061942|gb|AAZ20945.1| Phytoene synthase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 283

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/239 (10%), Positives = 63/239 (26%), Gaps = 30/239 (12%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKG 90
                  A    P       S LY F   +  + D       +   L             
Sbjct: 10  YAKSFNWAGFFLPKNIYEKCSSLYDFCRTIDDIADDKNELNIKKKNL------LIFKNNF 63

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS-YNDSIFDCKQFEHYAFRISSR 149
           +     +     +  ++ +  +  +   D+ +    D          K+   Y++R++  
Sbjct: 64  INKNFDNLIIKNMWILMEENKISIKIVEDLFDGIESDLNEVVKFNKKKELLIYSYRVAGT 123

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           +  +   IL  +  ++    I   GIA  +  +   +    +  + Y             
Sbjct: 124 VGLMMAKILGVQNKNSMKSAID-LGIAMQLTNISRDVIEDMNNNRFYI-----------N 171

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKHA 267
             F + +N+            +   +   +   ++ I      A +    I   +    
Sbjct: 172 HDFETIKNT----------LSMADLFYESSFASIKEIPFRFRFAILVARRIYRKIGAKI 220


>gi|170751793|ref|YP_001758053.1| squalene synthase HpnC [Methylobacterium radiotolerans JCM 2831]
 gi|170658315|gb|ACB27370.1| squalene synthase HpnC [Methylobacterium radiotolerans JCM 2831]
          Length = 298

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 82/270 (30%), Gaps = 21/270 (7%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P +R ++   Y F      V D A  +P  +   L    D      
Sbjct: 16  HRDENFPVASHLIHPRHRGAILAFYNFVRAGDDVADHAALSPERKLELLDRLADALTG-- 73

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
               A    P +  L   +    LP ++ L++++A   D+  +   D  +  HY    + 
Sbjct: 74  ----AGPSDPEAEPLKRELAARGLPPRHALELLDAFRMDARKNRYADWDELIHYCRYSAM 129

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDILGAVGL 207
            +      +   +  +   R       A  +   +           ++Y P D L   G 
Sbjct: 130 PVGRFVLDVHGEDP-ARVYRASDAICAALQVINHLQDCGKDFAALDRVYLPQDCLDRHGA 188

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA------FIPVSITE 261
                   +   ++  AI+  A+  L+ L +       I              + V ++ 
Sbjct: 189 TVAMLGEAKAPPQLRAAIRELAQRCLELLDEGAVLPDLIDDLRLSLEIAAIHRLAVVLSR 248

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +L+         +S      +       L
Sbjct: 249 GLLER------DPLSEKVHHGKAAFALTAL 272


>gi|86748846|ref|YP_485342.1| squalene/phytoene synthase [Rhodopseudomonas palustris HaA2]
 gi|86571874|gb|ABD06431.1| Squalene/phytoene synthase [Rhodopseudomonas palustris HaA2]
          Length = 292

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 76/264 (28%), Gaps = 16/264 (6%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  +  P +R  +   Y F      + D A  +  T+   L   +       
Sbjct: 13  HRDENFPVASWIIHPRHRELILAFYNFVRTADDIADHAMLDAATKLDYLDLLEAELLGHG 72

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P +VEL   + +  +P ++ LD++ A   D       D  +  HY    + 
Sbjct: 73  A------TQPEAVELRRALAERGMPPRHALDVLIAFRMDVTKLRYEDWDEVIHYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +      +              I   +      Y    ++Y P D L A G 
Sbjct: 127 PVGRFMLDVHGESTSTWPA--SDALCAGLQINNHLQDCGKDYRNLNRVYLPRDALDAAGA 184

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVL 264
             E      +S  +   ++  A      L + R     I  D         I    + ++
Sbjct: 185 KVEDLGHLTSSPALLRCLQGLAVRTDVLLGEGRPLAAEI-KDFRLGLEVSVIQAFADRIV 243

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPW 288
              +      +S    P  +    
Sbjct: 244 AMLKVR--DPLSERVHPKPIEFLL 265


>gi|227541324|ref|ZP_03971373.1| phytoene/squalene synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182875|gb|EEI63847.1| phytoene/squalene synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 265

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 64/274 (23%), Gaps = 28/274 (10%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                 + +        +A  L P   R  ++ LY        + D A    T   +L+ 
Sbjct: 2   AHRAARQVIATYSTSFGIASALLPRAMRRDIAHLYAVVRIADEIVDGAAPAETASAQLEA 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           +++               P      +  R      ++      +   D         ++ 
Sbjct: 62  YEEAV--CAAPARPFHTDPILHAYAATARHCGFAEEHLRAFFASMRTDLTPREY-TPEEL 118

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVI-----KYAGIAQFIGQLICQLPIHYHRGQ 194
             Y +  +  +  L   +  ++   A  R       ++ G A      +  L     R  
Sbjct: 119 TQYIYGSAEVIGLLCLDVFLADAPYAGDRAYLENGARHLGAAFQKVNFLRDLHEDTVRLG 178

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PA 253
             +    L +V                    +   E     L +A   +  +        
Sbjct: 179 RAYYPRDLTSVD------------------KQKIVESIKADLAEATPTIEELPRGARVGV 220

Query: 254 FIPVSITESVLKHAQNHGFKIVS-HSHTPNQLVR 286
                I   + +       + +           +
Sbjct: 221 RAAAGIYGRLTEQLDAMTTQELHARRAHVPAWEK 254


>gi|114330424|ref|YP_746646.1| squalene/phytoene synthase [Nitrosomonas eutropha C91]
 gi|114307438|gb|ABI58681.1| farnesyl-diphosphate farnesyltransferase [Nitrosomonas eutropha
           C91]
          Length = 346

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 74/306 (24%), Gaps = 43/306 (14%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR---------- 68
            D+ +    L+ +     L     PP  R  +   Y     +  V D +           
Sbjct: 8   DDARYQEFILQGVSRTFALTIPQLPPALRAVIGNAYLLCRIVDTVEDDSALTLEQTRELA 67

Query: 69  ----NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
                 ++  +  + +              +         +++R     N      +E  
Sbjct: 68  GMFTEVVSGSIEAEIFAQALYPLLSEHTIPAEHDLIKNTPAVIRMTHSFNSVQRQALERC 127

Query: 125 FFDSYNDS-----------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-- 171
                              + +  + + Y + ++  +  + T +        +       
Sbjct: 128 IRIMGQGMAAYQEKESLAGLENLAEMDLYCYHVAGVVGEMLTELFCDYSPEINQHKSTLM 187

Query: 172 ----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G    +  ++  +     RG  + P DI    G D ++   G+ +      +  
Sbjct: 188 KLAVSFGQGLQMTNILKDIWEDRKRGACWLPRDIFLEEGFDLDNLQPGRCAQGFHDGLGT 247

Query: 228 FAELGLKYLFKAREEMRYIL-------PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHT 280
              +   +L  A    R I             A     +    L     +  +  +    
Sbjct: 248 LIGIAKSHLHNAMIYTRLIPSHETGIRRFCLWAIGMAVL---TLNKI--NNKRNFTAGVQ 302

Query: 281 PNQLVR 286
                R
Sbjct: 303 VKISRR 308


>gi|198283891|ref|YP_002220212.1| Squalene synthase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198248412|gb|ACH84005.1| Squalene synthase [Acidithiobacillus ferrooxidans ATCC 53993]
          Length = 401

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/305 (9%), Positives = 71/305 (23%), Gaps = 41/305 (13%)

Query: 6   LTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           +T+  R       R   +  ++L+ +     L     P   R ++   Y        + D
Sbjct: 49  VTRQDRMLMAALERALAYQAQSLQVVSRTFALTIPQLPEALRDAVGNGYLLCRIADTIED 108

Query: 66  TARNP--------------ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD 111
               P              +        +     +     + E+          +V    
Sbjct: 109 DPDMPWEKKACWQAKFLQVVEGADDPAAFAAALGADLSPEMPEAEHDLIRHTPEVVAITH 168

Query: 112 -----------LPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDS 160
                         +     +      +    + D    + Y + ++  +  + T +   
Sbjct: 169 SLNPTQQAALSRCVRIMGMGMAEFQQHASLQGLADMAALDRYCYVVAGVVGEMLTSLFVE 228

Query: 161 ------ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS 214
                 E  +   R+    G    +  ++  +   + RG  + P  +    G D      
Sbjct: 229 FEPLLAEHDAEMQRLAVSFGQGLQMTNILKDIWDDWQRGVSWMPRALFQRHGCDIAGVRP 288

Query: 215 GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-------VFPAFIPVSITESVLKHA 267
           G         +     +   +L  A      I             A     +    L+  
Sbjct: 289 GSRDPAFQAGLTELLGIAANHLQNALRYTLLIPAGQTGMRDFCLWAIAMAVL---TLRRI 345

Query: 268 QNHGF 272
             +  
Sbjct: 346 AENPA 350


>gi|6466216|gb|AAF12832.1|AF203881_5 phytone synthase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|2598074|emb|CAA04732.1| HpnC protein [Zymomonas mobilis]
          Length = 298

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 86/271 (31%), Gaps = 10/271 (3%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
           D +  +A  L  P YR  +   Y F  +   V D      ++  RL   +D+  S T   
Sbjct: 34  DENFPVASFLINPEYRPIIMAFYQFARQADDVADNV--IASKKDRLAILEDMRSSLTGES 91

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
            +E  +    + L      D    + LD++EA   D   +   +      Y    +S + 
Sbjct: 92  QSEPNAVVLRQTLIN-HGLDHTIVHGLDLLEAFRRDVSVNRYENWDALMDYCRYSASPVG 150

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRE 210
                +    R      +      A  +   +      Y    ++Y P DI+ AVG    
Sbjct: 151 RFVLDVHKESRN--LWPMNDALCTALQVINHLQDCGKDYRMMNRIYIPSDIMEAVGATAG 208

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKHAQ 268
                  S  +  AI+  A      L ++      I        + V   + ES+ +   
Sbjct: 209 DLGCFHASLPLRQAIETAALKTKSLLKRSSSFSVAIHDKRLGVEVAVIQRLAESLTECLT 268

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            H    +S     N+         ++  + F
Sbjct: 269 KH--DPLSERVHHNKAETLGLAFVAAAGRLF 297


>gi|82702086|ref|YP_411652.1| squalene/phytoene synthase [Nitrosospira multiformis ATCC 25196]
 gi|82410151|gb|ABB74260.1| farnesyl-diphosphate farnesyltransferase [Nitrosospira multiformis
           ATCC 25196]
          Length = 380

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 81/304 (26%), Gaps = 44/304 (14%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKD- 82
              L+ +    YL   + P   R  +   Y F      + D    +   R   L  +++ 
Sbjct: 34  HDILKQVSRSFYLTLNVLPIGVREQMGLAYLFARAADTIADTDLIDRAERLKYLNQFREQ 93

Query: 83  ----IFESSTKGLIAESISP---------FSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                 +      I  ++ P             L    R Y+  +      I+       
Sbjct: 94  FMTARIDRKAVQEIQSALVPHQKDSGESILLQRLEDCFRLYEECSPDDRKRIQWVIKVLT 153

Query: 130 NDS-----------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK- 171
                               +      + Y + ++  +    T ++ + R +     ++ 
Sbjct: 154 EGMEMDLNRFPGQSGNQLAALSTLDDLDQYTYHVAGCVGDFWTRMICAHRPTMGRWDVEE 213

Query: 172 ------YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
                   G    +  ++  +    H G+ Y P  +L   GL   + L+  +  +    +
Sbjct: 214 MAAIGVRFGKGLQLTNILKDIGRDLHNGRCYIPESLLDEAGLKPANLLNDSSLPKFKPVL 273

Query: 226 KIFAELGLKYLFKAREEMRYIL----PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
                + +++L +       I             P+ +    L+        ++  +   
Sbjct: 274 DRLIRMAIEHLDQGWIYTMAIPVSEIRQRLACIWPILLAGETLRRVAVTP-DLLDPAVYV 332

Query: 282 NQLV 285
               
Sbjct: 333 KAPR 336


>gi|88811395|ref|ZP_01126650.1| Squalene/phytoene synthase [Nitrococcus mobilis Nb-231]
 gi|88791284|gb|EAR22396.1| Squalene/phytoene synthase [Nitrococcus mobilis Nb-231]
          Length = 361

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/288 (10%), Positives = 75/288 (26%), Gaps = 44/288 (15%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            + L  +     L     P   R S++  Y        + D    P     + Q + D F
Sbjct: 19  QQLLPGVSRTFALTIPQLPEPLRTSVTNAYLLCRIADTIEDE---PTLSARQKQSFHDRF 75

Query: 85  ESSTKGLIAESISPFSVELLSIVRQY------------------------------DLPN 114
                G        F+ +L  ++ +                               +   
Sbjct: 76  NVIVAGEGEPPSR-FAADLYPMLSETMSADERELIRQLPGVIAITHSLPAKERAALERCV 134

Query: 115 QYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK--- 171
           +   + +     +     + D  +FE Y + ++  +  + T +        + +  +   
Sbjct: 135 RIMCEGMPWFQRNRRQGGLDDIFEFERYCYYVAGVVGEMLTDLFCQYSVDIAHQRERLRA 194

Query: 172 ---YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G    +  ++  +     RG  + P D+    G +                I+  
Sbjct: 195 LSVSFGAGLQMTNILKDVWEDRRRGACWLPRDVFQQFGFELCDLSEAHYDPAFGAGIQEL 254

Query: 229 AELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGF 272
                 +L  A   ++ + P            +++    L+    +  
Sbjct: 255 VARAHGHLRNALAYVQLLPPGEVGIRRFCLWALAMAALTLQRLNANPA 302


>gi|255721451|ref|XP_002545660.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136149|gb|EER35702.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 383

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 54/375 (14%), Positives = 109/375 (29%), Gaps = 82/375 (21%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           +FL+ N +    I       V + L   D   Y+     P   R S   +  F+ E+ ++
Sbjct: 12  RFLSTNYQ---SILHNAQENVNQLLESSDRSSYILAQYIPEPARNSFLAIRAFNLEINKI 68

Query: 64  RDTARNPI-----------------TRDMRLQWWKDIFESSTKGLIAESIS---PFSVEL 103
            +   N                   T D++ ++W D+                 P ++ L
Sbjct: 69  NEGGSNAQSRASRASSQMSSTLGVSTADLKFKFWSDLLLRVFTEDSRNETDLGEPIAILL 128

Query: 104 LSIVR-QYDLPNQYFLDMIEAHFFDS-YNDSIFDCKQFEHYAFRISSRLIHLATMI---- 157
              +R  ++L   YF   ++          +         Y     S+L +L   +    
Sbjct: 129 RDGLRNDFNLDISYFQKFLQTRRQFLKNGGTFQTTNDICSYGEGTYSQLNYLTQSLLLSP 188

Query: 158 -----------LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAV 205
                         E  S    +  + G A  +  +I  +P +   R Q+  P++++ A 
Sbjct: 189 SISPSVIRLLEYSPELQSLLSDIAAHIGQATAVSSMILGVPYYAQTRNQVTLPVELMTAH 248

Query: 206 GLDRESFL-------------SGQNSDRISLAIKIFAELGLKYLFKAREEM--------- 243
            L +ES L               +  +++   +   A     ++  AR+++         
Sbjct: 249 DLSQESVLCLCQGHAGEDVSEESRVKEKLQEVVYQTAITANDHIITARDKLAKASSAIGK 308

Query: 244 -------------------RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
                              + I   +F   +    T   L   +   F I        + 
Sbjct: 309 VLESHANDRLLAQQSKNWRKNIPDVIFTPMMVGIPTVLYLNRLEKCDFDIFHRKLKQKEW 368

Query: 285 VRPWYMLSSSIKKRF 299
              W       K+ F
Sbjct: 369 RLAWTSFKDYYKRVF 383


>gi|326386878|ref|ZP_08208493.1| squalene synthase HpnC [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208681|gb|EGD59483.1| squalene synthase HpnC [Novosphingobium nitrogenifigens DSM 19370]
          Length = 274

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 84/269 (31%), Gaps = 18/269 (6%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             D +  +A L+  P +R  +   Y F      + D    P    + L        +  +
Sbjct: 12  HRDENFPVASLIIRPEHRAPVMAYYRFARAADDIADNPDAPQEDKLAL-------LAHMR 64

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
             ++   SP ++ L  ++ +  +   +  D+++A   D   D   D      Y    +  
Sbjct: 65  AGLSGVGSPEAMALREVMAERGIDPVHAHDLLDAFVRDVTVDRYADWDDLIGYCRLSAMP 124

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLD 208
           +     ++       A+         A  I   +      Y   G++Y PLD     GL 
Sbjct: 125 VGR--YVLDVHGESRATWAANDALCAALQIINHLQDCAKDYATIGRVYIPLDT----GLH 178

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKH 266
                +   S  +   I   A      L ++      I      A +     + ES+   
Sbjct: 179 VTDLGADHASPSLRAIIAGLAHRTNGLLRQSAGFAAQIRDRRLAAEVAAIQRLAESLCDR 238

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
            +      +  +   +++       S++I
Sbjct: 239 LERR--DPLCENVHHSKIEALVLGASAAI 265


>gi|254576857|ref|XP_002494415.1| ZYRO0A00924p [Zygosaccharomyces rouxii]
 gi|238937304|emb|CAR25482.1| ZYRO0A00924p [Zygosaccharomyces rouxii]
          Length = 439

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 85/306 (27%), Gaps = 26/306 (8%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           LKF+ +       I S +       L+              P  R ++   Y     L  
Sbjct: 20  LKFIRQPLYAPRDIASPELTRCYELLKATSRSFAAVIQELNPELRDAVMLFYLILRALDT 79

Query: 63  VRDTAR-NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYF 117
           V D     P  +   L+ + +  ++           E      VE   I+ QY      +
Sbjct: 80  VEDDMTIEPQLKVKVLRSFAEKLDTRDWSFDGNSPEEKDRKVLVEFPCILHQYHELRPKY 139

Query: 118 LDMIEAHFFDSYNDS-------------IFDCKQFEHYAFRISSRLIHLATMI-----LD 159
             +I+       N               +   K ++ Y   ++  +    T +       
Sbjct: 140 RQVIQDITVKMGNGMADYILDEQFNLQGVQTVKDYDLYCHYVAGLVGEGLTHLIVEAGFG 199

Query: 160 SERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSD 219
           +    A+ ++ +  G+      +I         G+ ++P +I              +N+ 
Sbjct: 200 TPDLDANPQLYESMGLFLQKTNIIRDYAEDLGDGRSFWPREIWSKYAEKLPDLGDPRNAQ 259

Query: 220 RISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSH 277
                I       L ++      +  I          IP  +  + L     +  K+++ 
Sbjct: 260 NGLSCINELVLNALSHVIDVFTYLSSINEQSTFQFCAIPQVMAIATL-ALVFNNEKVLTD 318

Query: 278 SHTPNQ 283
                +
Sbjct: 319 RVKIRK 324


>gi|307822379|ref|ZP_07652611.1| Squalene/phytoene synthase [Methylobacter tundripaludum SV96]
 gi|307736945|gb|EFO07790.1| Squalene/phytoene synthase [Methylobacter tundripaludum SV96]
          Length = 399

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/316 (10%), Positives = 86/316 (27%), Gaps = 53/316 (16%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            L  +     L     P     +++  Y     +  + D     ++ + +  +  +    
Sbjct: 59  LLEGVSRTFALTIPQLPEKLYGAVANAYLLCRIVDTIEDEVS--LSPEQKKYFCSEFIH- 115

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC---------- 136
                   +  PF+VEL  ++ +  +P ++ L  +        +    D           
Sbjct: 116 --IVKTGTNSEPFAVELAPLLSEQTIPAEHTLIHVLPRVIQITHKFDPDQIEALASCVET 173

Query: 137 --------------------KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK----- 171
                                  + Y + ++  +  +   +        +    +     
Sbjct: 174 MAEGMPIFQAQDLHGGLATLADMDRYCYYVAGCVGEMLAKLFCHYSPEIAQHKDELLSLS 233

Query: 172 -YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              G    +  ++  +     RG  + P DI    G D ++     +S+  SL ++    
Sbjct: 234 VSFGQGLQMTNILKDIWDDAERGVCWLPQDIFTETGFDLKNLTPETHSENFSLGLEHLIS 293

Query: 231 LGLKYLFKAREEMRYILPD-------VFPAFIPVSITESVLKHAQNH-GFKIVSHSHTPN 282
           +   +L  A +    +             A     +    LK  + +  F          
Sbjct: 294 IAHGHLHNALKYTLLLPTHETGIRNFCLWALGMAVL---TLKKIKQNLDFNHSDQVKITR 350

Query: 283 QLVRPWYMLSSSIKKR 298
             V+   +  + +  R
Sbjct: 351 NSVKATILA-TRLTGR 365


>gi|58262166|ref|XP_568493.1| hypothetical protein CNM00870 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57230666|gb|AAW46976.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 278

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 77/288 (26%), Gaps = 33/288 (11%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
           D + +L     P   +        F+            P    +R Q+W+D  +      
Sbjct: 2   DPEAWLCSYFWPRREKAWWLAWRAFN------------PALASIRFQFWRDALKGIFAAN 49

Query: 92  IAE---SISPFSVELLSIVRQYDLPNQYFLDMIE-----------AHFFDSYNDSIFDCK 137
                    P +V L  + +   +   Y   +I+           A        S+    
Sbjct: 50  PQNQIVPQHPVAVLLADMKKHRPVQKYYLNQLIDVRVSLQIITAKALSLPPAAVSLESHL 109

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG-QLY 196
                             +       +     + +      +  L+  LPI   +  Q+ 
Sbjct: 110 SINSPLSTSLLLGPLPILLPPTHASSAHISHTLSHVSTLLAVVSLLRNLPILISQKKQIS 169

Query: 197 FPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRY-----ILPDV 250
            P DI    G+  E     G  +     A       G+  L  AR +++      +   V
Sbjct: 170 IPADICEKYGIVEEELFRRGAEAKGFRDACWEIGTRGMDELITARRDLKETGGKVVPSSV 229

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            P F+     E+ LK  + + F +       +       +       +
Sbjct: 230 MPIFLSAVAPENYLKRLEKYDFDVFHPDIQKHDWQLAPKIWYRYQTGK 277


>gi|328861052|gb|EGG10156.1| hypothetical protein MELLADRAFT_94543 [Melampsora larici-populina
           98AG31]
          Length = 660

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/347 (10%), Positives = 81/347 (23%), Gaps = 74/347 (21%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSP--PLYRISLSFLYYFHTELMRVRDTARNPITRDMR-- 76
                  LR      Y A L+       R     LY F  E   + D A +  +      
Sbjct: 311 LSHTSDLLRKASKSFYSASLVFSNYQSIRSKFIILYGFCRETDDLIDNAIDLKSAKESVL 370

Query: 77  -------LQW------------------------------------WKDIFESSTKGLIA 93
                  L W                                    ++       +  + 
Sbjct: 371 VCRSFLNLLWPEEEEQKEEGKEEKETSKKVIKANHEVKSQEVKPIDFEKKLNQFIEEKVP 430

Query: 94  ESISP---FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
               P       L   +R+            +A        +I        Y+  ++  +
Sbjct: 431 IHARPTFYLFSTLKDELRRQPFDELINGYSYDALE--FQQKTIESEADLIQYSRWVAGSV 488

Query: 151 IHLATMILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
             +   ++     ++                G+A  +  +   +      G++Y P    
Sbjct: 489 GEMCVDLMLKISMTSKPNPTLKSILSASNDMGVALQLVNIARDIKEDAKNGRIYLPTCWF 548

Query: 203 GAVG-----LDRESFLSGQNSD----RISLAIKIFAELGLKYLFKAREEMRYILPDVFPA 253
            +       L  E   S Q+        ++A +    L   Y  K++  +  +     P 
Sbjct: 549 KSSDEPLKPLHLELLKSAQSDQLNQFPYAIAAEKLLLLAKDYQLKSKFAIDNLPKSFRPG 608

Query: 254 FIPV-SITESVLKHAQ---NHGFKIVS-HSHTPNQLVRPWYMLSSSI 295
                 +   +    +   N+ +   +       +L R   +     
Sbjct: 609 VRAATEVYLEIGHKLKSTFNNSYSQWNGERVYLTKLHRALIVAREIW 655


>gi|146420593|ref|XP_001486251.1| hypothetical protein PGUG_01922 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146389666|gb|EDK37824.1| hypothetical protein PGUG_01922 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 370

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 102/346 (29%), Gaps = 73/346 (21%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI-------------- 71
           R L   D   Y+     P   R +   +  F+ E+ ++ D   NP               
Sbjct: 24  RMLETYDRSSYILGHYIPEPARDAFLAIRAFNVEINKIHDGGNNPESVSSRASSQLSNSM 83

Query: 72  ---TRDMRLQWWKDIFESSTKGLIAESI--SPFSVELLSIVR-QYDLPNQYFLDMIEAHF 125
              T D++ ++W D+   +     +      P    L   VR   +L   YF  +++   
Sbjct: 84  GITTSDIKFRFWTDMLTRAFTQPDSTRDIGEPICTLLREAVRNDMNLDISYFHRIMQTRR 143

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILD---------------SERYSASLRVI 170
               +           Y     S+L +    +L                 +  +    + 
Sbjct: 144 QFLNDRQFQTVDAICSYGEGTYSQLNYATQGLLLSPSISPSSIRLLENSPDLQTTVSDIA 203

Query: 171 KYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLS---------GQNSDR 220
            + G A  +  +I  L  +   +  +  P+DI+    L +ES L           +  ++
Sbjct: 204 AHIGQATAVSSMILGLEYYSKTKNLVTLPVDIMTKFDLSQESVLRLMNGHTENTQELREQ 263

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYI----------------------------LPDVFP 252
           +   +   A     ++  AR +++ +                               +F 
Sbjct: 264 LKNVVYETAITANDHMITARTKLKNLKEGIVETVRSQSDDELLQRHSRNWRKNVPDAIFT 323

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            F+    T   L+  +   F I+       +    W    +  ++R
Sbjct: 324 PFMVAVPTSLYLRKLERFDFDILHPKFNQKEWRLAWTSFRNYYQRR 369


>gi|195566133|ref|XP_002106645.1| GD16996 [Drosophila simulans]
 gi|194204027|gb|EDX17603.1| GD16996 [Drosophila simulans]
          Length = 197

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 10/148 (6%)

Query: 11  RKEEKIFSRD-----SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
            KE+K+   D     +   +  +   DY+ YL  LL P   R +   L  F+ E+ R   
Sbjct: 38  PKEKKVVETDKNGYGAKHCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVS 97

Query: 66  TAR-NPITRDMRLQWWKDIFESSTKGLIAES---ISPFSVELLSIVRQYDLPNQYFLDMI 121
             +  P    MRL++W D  +   +     S     P   EL   V    L   Y   ++
Sbjct: 98  GHQIEPQIAKMRLKFWHDSIDKCFEPDTQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLV 157

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSR 149
            A      + +    ++ E Y  +  S 
Sbjct: 158 TARERPPTH-AFESIRELEEYTEQTFSS 184


>gi|148274071|ref|YP_001223632.1| putative bifunctional phytoene synthase/phytoene dehydrogenase
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147832001|emb|CAN02973.1| putative bifunctional phytoene synthase/phytoene dehydrogenase
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 881

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/274 (10%), Positives = 63/274 (22%), Gaps = 32/274 (11%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRDMRLQWWK 81
            +R       LA  L     R  +  +Y        + D A      +P   +  L   +
Sbjct: 33  VIRRYSTSFGLASRLLGADVRQHIENVYALVRVADEIVDGAAAGAGVDPAHVEELLDALE 92

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              E     L   S +          R+     +       +   D           F  
Sbjct: 93  QETED--AMLRGYSTNLVVHAFAITARRAGFGAELTAPFFASMRMDLRRMEH-TPASFTE 149

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIK------YAGIAQFIGQLICQLPIHY-HRGQ 194
           Y +  +  +  +          +     I+        G A      +  L   +   G+
Sbjct: 150 YVYGSAEVVGLMCLRAFLVGHATTRPERIRFEEGAKRLGAAFQKVNFLRDLAADHGALGR 209

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            YFP   +                       +   +     L  +   +  +      A 
Sbjct: 210 SYFPGVDVATFS---------------EADKERILDDIDHDLRMSGAVIPDLPASSRRAV 254

Query: 255 -IPVSITESVLKHAQNHGF-KIVSHSHTPNQLVR 286
            +   +   +    ++    ++V         V+
Sbjct: 255 ALAQGLFAELAVRLRDTPASELVRTRVRVPDPVK 288


>gi|296118954|ref|ZP_06837527.1| phytoene synthase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968052|gb|EFG81304.1| phytoene synthase [Corynebacterium ammoniagenes DSM 20306]
          Length = 303

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/288 (10%), Positives = 66/288 (22%), Gaps = 31/288 (10%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITR 73
                  + +R       LA  L     +  +  LY        + D A      +    
Sbjct: 19  TAQHAAHQIIRRYSNSFSLASNLLRGHVKTDIRNLYAVVRIADEIVDGAGYGAGLDTSQC 78

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  ++                P         R+ +  ++Y      +   D    S 
Sbjct: 79  QQLLDDYERQV--LAAPHQRLHSDPVLHAYAISARRCEFKDEYLSAFFASMRRDLSPQSG 136

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSA------SLRVIKYAGIAQFIGQLICQLP 187
              ++F+ Y +  +  +  L        +              +  G A      +  + 
Sbjct: 137 NKQQEFDDYIYGSAEVIGLLCLQAFLVGQNPTPDARGVMEHGARTLGAAFQKINFLRDIA 196

Query: 188 IHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                 G+ YFP                 +  D +              L  AR  + Y+
Sbjct: 197 NDTQFLGRTYFPQ------------LEEQELDDALKA---ELVADIRSDLTVARSSISYL 241

Query: 247 LPDVF-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLS 292
             +          I   +           ++S   + +   +   +  
Sbjct: 242 PANARIGVIAATEIFAELTNDIDRISAAELLSTRVSLSPARKVIVLAR 289


>gi|319949999|ref|ZP_08023983.1| phytoene synthase [Dietzia cinnamea P4]
 gi|319436341|gb|EFV91477.1| phytoene synthase [Dietzia cinnamea P4]
          Length = 262

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 60/254 (23%), Gaps = 22/254 (8%)

Query: 9   NTRKEEKIFSRDSLFVLR-NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
             +     F+  +       LR       LAC L  P  R  ++ +Y +      V D A
Sbjct: 2   TQQSPHAEFTEAARRCSEVILRRYSTSFALACRLLAPATRPHVAAIYAWARVGDEVVDGA 61

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
            +       L   +    +           P +       R+Y +  +      ++   D
Sbjct: 62  MDDPVAARELIA-EARRRTHRAIDRGLDPDPVTHAFADTARRYGIDARLVDPFYDSMEAD 120

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDS---ERYSASLRVIKYAGIAQFIGQLIC 184
                    +    Y    +  +  +                    +  G A      + 
Sbjct: 121 LEVTEH-TEESLRRYIHGSAEVIGEMCLRTFAGGGLGDDDEMAAGARALGAAFQKVNFLR 179

Query: 185 QLPIH-YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
            +       G+ Y P     A  L  E               +  A+     L  AR  +
Sbjct: 180 DIREDSLELGRNYLPGRDPRA--LTEEDV-------------RELADDVDADLRLARAAI 224

Query: 244 RYILPDVFPAFIPV 257
             I      A    
Sbjct: 225 DRIPGRDRLAVAAA 238


>gi|227502075|ref|ZP_03932124.1| phytoene synthase [Corynebacterium accolens ATCC 49725]
 gi|227077230|gb|EEI15193.1| phytoene synthase [Corynebacterium accolens ATCC 49725]
          Length = 284

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 66/287 (22%), Gaps = 25/287 (8%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
              S    + +        LA  L     R  +  LY        + D   +  + D   
Sbjct: 7   QAASRAAAQVMGQYSTSFSLATRLLRGRVREDIRHLYAVVRIADELVDGTADQASIDAAA 66

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
                               P         R+     ++ +   ++   D          
Sbjct: 67  TLDAYEAAILAAPEKRLHTDPVVHSYAITARRCGFQREHLVAFFDSMRADLNQREY-SAA 125

Query: 138 QFEHYAFRISSRLIHLATMILDSE------RYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
           +   Y +  +  +  L   +  +E        +A  R  ++ G A      +  L     
Sbjct: 126 ELAEYIYGSAEVIGLLCVQVFLAEETVSAADRAAMDRGARHLGSAFQKINFLRDLGEDSS 185

Query: 192 R-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
             G+ YFP     A G+  E             A         + L  A E +  +    
Sbjct: 186 VLGRAYFPQ---AAGGVLSE------------AAKSALIAEIRRELAAAEEAINLLPLSA 230

Query: 251 F-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSI 295
                    I   +           + +   +     + W    +  
Sbjct: 231 RVGVRAAADIFAELTNRLAATPAAELKTTRISVPNRTKAWLAARAVR 277


>gi|290956810|ref|YP_003487992.1| biosynthetic transferase [Streptomyces scabiei 87.22]
 gi|260646336|emb|CBG69431.1| putative biosynthetic transferase [Streptomyces scabiei 87.22]
          Length = 623

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 90/280 (32%), Gaps = 10/280 (3%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NP 70
           +E            R +R      Y    L PP  R +   LY        + D+    P
Sbjct: 18  RERSALDAAYEECRRLVRSTRPTEYALMQLMPPAVRPACWALYAALAAADDLVDSTEGTP 77

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
             R  RLQ W+   E+        S  P    L   V  + L     L  ++A   D   
Sbjct: 78  SERARRLQDWRAALEADLAR--GTSDDPVRHALTDAVWHWGLDLGDLLGSLDAVGRDEGR 135

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGI-----AQFIGQLICQ 185
           + +   +++   A   +         +L        +R+    G        F+  ++  
Sbjct: 136 EGVATWQEWRERAHAQNVSWPEQLMRMLVRSGLPVPVRLRDLPGFTRFVDGLFLTDMLRD 195

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
           LP     GQ++FP ++L    +     LS + +  +   +   A    ++L  +R  +R 
Sbjct: 196 LPEDLDAGQVWFPAEVLDRFQVAPADLLSREWTPGVRRLVAHLAGQARQWLENSRRALRN 255

Query: 246 ILPDVFPAFI--PVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            LP      +   V +  + L      G  ++       +
Sbjct: 256 TLPLGPAIVLDSAVELFGAELDAIVRAGSAVLHRPVRVPR 295


>gi|90423225|ref|YP_531595.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisB18]
 gi|90105239|gb|ABD87276.1| Squalene/phytoene synthase [Rhodopseudomonas palustris BisB18]
          Length = 292

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 72/262 (27%), Gaps = 16/262 (6%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTKG 90
           D +  +A  +  P +R  +   Y F      + D A       +  L   +         
Sbjct: 15  DENFPVASWIIHPRHRDLILAFYNFVRTADDIADHAELADQAKLSYLDLLESEL------ 68

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
           L      P +V L   +    +P ++ LD++ A   D          +  HY    +  +
Sbjct: 69  LGQGDSQPEAVNLRRALAARAMPPRHALDVLIAFRMDVTKSRYETWDEVIHYCRYSAMPV 128

Query: 151 IHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDR 209
                 +      +A+            I   +      Y    ++Y P D L   G   
Sbjct: 129 GRFM--LDVHGESTATWPASDALCAGLQINNHLQDCGKDYKALNRVYLPRDALAQAGASA 186

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVLKH 266
           E     + S  +   +   A      L +AR     +  DV        I    + ++  
Sbjct: 187 EELGQPRASAALLQCLHALALRTEGLLSEARSLSAEV-KDVRLGLEVAVIQAFADKIVGL 245

Query: 267 AQNHGFKIVSHSHTPNQLVRPW 288
            +      +        L    
Sbjct: 246 LEVR--DPLCERVHLKPLDLLL 265


>gi|91978041|ref|YP_570700.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisB5]
 gi|91684497|gb|ABE40799.1| Squalene/phytoene synthase [Rhodopseudomonas palustris BisB5]
          Length = 292

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 78/261 (29%), Gaps = 16/261 (6%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  +  P +R  +   Y F      + D A  +  T+   L   +       
Sbjct: 13  HRDENFPVASWIIHPRHRDLILAFYNFVRTADDIADHAMLDAPTKLSYLDLLEAEL---- 68

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
             L      P +V L   + +  +P ++ LD++ A   D       D  +  HY    + 
Sbjct: 69  --LGRGETQPEAVNLRRALAERGMPPRHALDVLIAFRMDVTKLRYEDWDEVIHYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +      +              +   +      Y    ++Y P D L AVG 
Sbjct: 127 PVGRFMLDVHGESTSTWPA--SDALCAGLQVNNHLQDCGKDYRNLNRVYLPRDALDAVGA 184

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVL 264
             E     ++S  +   ++  A      L + R     +  D         I    + ++
Sbjct: 185 QVEELGQLKSSPALLHCLQSLAARTDVLLGEGRPLAAEV-KDFRLGLEVSVIQAFADRIV 243

Query: 265 KHAQNHGFKIVSHSHTPNQLV 285
           +  +      +S       + 
Sbjct: 244 RMLKVR--DPLSERVHLKPIE 262


>gi|170034993|ref|XP_001845356.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876814|gb|EDS40197.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 218

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 4/150 (2%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
              + L  +R  D + +L  LL     R     +  F+ E+ R+  T  +     +RL++
Sbjct: 35  AQNYCLNLVRQYDKENFLCTLLLKNPERRHALAIRAFNVEIARITGTVSDDKIGQLRLKF 94

Query: 80  WKDIFESSTKGLIAE--SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
           W+D      +    +     P   EL   +    L  +YF  +I +    +        K
Sbjct: 95  WEDTIGRLHRSDNPDHVPEQPVVQELKVAIDAAKLTKRYFQRLISSRLNANLR--FVTTK 152

Query: 138 QFEHYAFRISSRLIHLATMILDSERYSASL 167
           Q E YA    S +++L   +       A  
Sbjct: 153 QLEEYAEHSVSSVLYLLLEVHGVRNVHADH 182


>gi|32349566|gb|AAP56084.1| phytoene synthase [Zea mays]
 gi|32349568|gb|AAP56085.1| phytoene synthase [Zea mays]
 gi|32349570|gb|AAP56086.1| phytoene synthase [Zea mays]
 gi|32349574|gb|AAP56088.1| phytoene synthase [Zea mays]
 gi|32349578|gb|AAP56090.1| phytoene synthase [Zea mays]
 gi|32349580|gb|AAP56091.1| phytoene synthase [Zea mays]
 gi|32349582|gb|AAP56092.1| phytoene synthase [Zea mays]
 gi|32349584|gb|AAP56093.1| phytoene synthase [Zea mays]
 gi|32349586|gb|AAP56094.1| phytoene synthase [Zea mays]
 gi|32349590|gb|AAP56096.1| phytoene synthase [Zea mays]
 gi|32349594|gb|AAP56098.1| phytoene synthase [Zea mays]
 gi|32349600|gb|AAP56101.1| phytoene synthase [Zea mays]
 gi|32349602|gb|AAP56102.1| phytoene synthase [Zea mays]
 gi|32349606|gb|AAP56104.1| phytoene synthase [Zea mays]
 gi|32349608|gb|AAP56105.1| phytoene synthase [Zea mays]
 gi|32349610|gb|AAP56106.1| phytoene synthase [Zea mays]
 gi|32349612|gb|AAP56107.1| phytoene synthase [Zea mays]
 gi|32349614|gb|AAP56108.1| phytoene synthase [Zea mays]
 gi|32349616|gb|AAP56109.1| phytoene synthase [Zea mays]
 gi|32349618|gb|AAP56110.1| phytoene synthase [Zea mays]
 gi|32349620|gb|AAP56111.1| phytoene synthase [Zea mays]
 gi|32349622|gb|AAP56112.1| phytoene synthase [Zea mays]
 gi|32349624|gb|AAP56113.1| phytoene synthase [Zea mays]
 gi|32349626|gb|AAP56114.1| phytoene synthase [Zea mays]
 gi|32349628|gb|AAP56115.1| phytoene synthase [Zea mays]
 gi|32349630|gb|AAP56116.1| phytoene synthase [Zea mays]
 gi|32349632|gb|AAP56117.1| phytoene synthase [Zea mays]
 gi|32349634|gb|AAP56118.1| phytoene synthase [Zea mays]
 gi|32349636|gb|AAP56119.1| phytoene synthase [Zea mays]
 gi|32349638|gb|AAP56120.1| phytoene synthase [Zea mays]
 gi|32349640|gb|AAP56121.1| phytoene synthase [Zea mays]
 gi|32349642|gb|AAP56122.1| phytoene synthase [Zea mays]
 gi|32349644|gb|AAP56123.1| phytoene synthase [Zea mays]
 gi|32349646|gb|AAP56124.1| phytoene synthase [Zea mays]
          Length = 151

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 6/151 (3%)

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVI 170
            F DMIE    D       +  +   Y + ++  +  ++  ++           +     
Sbjct: 1   PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAA 60

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P D L   GL  E    G  ++R    +K   +
Sbjct: 61  LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 120

Query: 231 LGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
               +  +A   +  +      P +  + + 
Sbjct: 121 RARMFFEEAERGVNELSQASRWPVWASLLLY 151


>gi|149204782|ref|ZP_01881745.1| hypothetical protein RTM1035_10015 [Roseovarius sp. TM1035]
 gi|149141751|gb|EDM29804.1| hypothetical protein RTM1035_10015 [Roseovarius sp. TM1035]
          Length = 260

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 96/283 (33%), Gaps = 27/283 (9%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       +R  D DR++A + +P   R  L  +Y F+ E+ R     + P+  +MR
Sbjct: 5   FDADLTACADLVRRADPDRFMAAMAAPVAARSVLFPVYAFNVEVARAPWVTQEPMIAEMR 64

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW D  +    G +          L   +           D++EA  +D   D   D 
Sbjct: 65  LQWWADALDEIAAGGLV-RRHEVVTPLAHALDAPG--AALLADLVEARRWDIARDPFEDA 121

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
            QF  Y    S  L+  A          A+  V + AG A  +      +P     G+  
Sbjct: 122 AQFTQYIETTSGNLMQAAVRA----LGPAAPDVARDAGYALGLANWFRAIPALEAAGRKP 177

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
                                 D    A++  A+ GL  L +AR     +      AF+P
Sbjct: 178 LV--------------------DGRPEAVQALAKDGLVRLRRARAARGQVSHTAVAAFLP 217

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + +   +L+ A      +               ++  ++  R+
Sbjct: 218 LWLAGPLLRQAARDPRAVAEGRLAVAPARARLSLMVRALSGRW 260


>gi|32349712|gb|AAP56157.1| phytoene synthase [Zea mays]
          Length = 151

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 6/151 (3%)

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVI 170
            F DMIE    D       +  +   Y + ++  +  ++  ++           +     
Sbjct: 1   PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAA 60

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P D L   GL  E    G  ++R    +K   +
Sbjct: 61  LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 120

Query: 231 LGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
               +  +A   +  +      P +  + + 
Sbjct: 121 RARMFFEEAERGVNELSQASRWPVWASLLLY 151


>gi|227487613|ref|ZP_03917929.1| phytoene/squalene synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227092431|gb|EEI27743.1| phytoene/squalene synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 265

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/274 (9%), Positives = 63/274 (22%), Gaps = 28/274 (10%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                 + +        +A  L P   R  ++ LY        + D A    T   +L+ 
Sbjct: 2   AHRAARQVIATYSTSFGIASALLPRAMRRDIAHLYAVVRIADEIVDGAAPAETASAQLEA 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           +++               P      +  R      ++      +   D         ++ 
Sbjct: 62  YEEAV--CAAPARPFHTDPILHAYAATARHCGFAEEHLRAFFASMRADLTPREY-TPEEL 118

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVI-----KYAGIAQFIGQLICQLPIHYHRGQ 194
             Y +  +  +  L   +  ++   A  R       ++ G A      +  L        
Sbjct: 119 TQYIYGSAEVIGLLCLDVFLADTPYAGDRAYLENGARHLGAAFQKVNFLRDLHEDTVGLG 178

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PA 253
             +    L +V                    +   E     L +A   +  +        
Sbjct: 179 RAYYPRDLTSVD------------------KQKIVESIRADLAEATPTIEELPRGARVGV 220

Query: 254 FIPVSITESVLKHAQNHGFKIVS-HSHTPNQLVR 286
                I   + +       + +           +
Sbjct: 221 RAAAEIYGRLTEQLDAMTTQELHARRAHVPAWEK 254


>gi|254670698|emb|CBA06841.1| putative phytoene synthase [Neisseria meningitidis alpha153]
          Length = 188

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 53/176 (30%), Gaps = 5/176 (2%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIFESSTK 89
              +  +  L+ P   R  +  +Y F      + D    P    +  L+  +   +    
Sbjct: 5   HYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMPSEARLAGLEGLRRELDVLAS 64

Query: 90  GLIAESISPFSVELL-SIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                S  P    L    V  + L  Q F D++ A   D          +   Y  R ++
Sbjct: 65  --GGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDVVKTRYAHFGELADYCRRSAN 122

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            +  +   +   +  +  +        A  +      + + + +G++Y P      
Sbjct: 123 PVGRIMLAL-YGKTDAVCVAQSDGICTALQLVNFWQDVAVDWQKGRVYIPQGRFVE 177


>gi|73542768|ref|YP_297288.1| farnesyl-diphosphate farnesyltransferase [Ralstonia eutropha
           JMP134]
 gi|72120181|gb|AAZ62444.1| farnesyl-diphosphate farnesyltransferase [Ralstonia eutropha
           JMP134]
          Length = 350

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 83/303 (27%), Gaps = 45/303 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA------------------- 67
            L+ +    YL   + P   R  +   Y        + DT+                   
Sbjct: 13  LLKGVSRSFYLTLRILPAGMRDPVGLAYLIARAADTIADTSLISPAVRLDLLLSLRRCVN 72

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
            +     +  +  +++    T+   +  +         + +  D        ++      
Sbjct: 73  GSDDPAQLADRLAREVAGHQTQAKESALLESIRPAFDVLAQLDDADRTAVRGIVTTLTEG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERY-------SASL 167
              D             ++ D    + Y + ++  +    T +  + +        +   
Sbjct: 133 MEFDLRTFPDERSGQLGALPDLSDLDRYTYLVAGCVGEFWTAMTYAHQPGVLKEDSTVMH 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
           R     G A  +  ++         G+ Y P D+LG  G      L   NS R+   +  
Sbjct: 193 RRGIRFGKALQMVNVLRDCANDLRIGRCYLPTDVLGRHGAQPRDLLQPANSQRMRPVLFE 252

Query: 228 FAELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
              L L +  +A      I             P+ I    L+    +  ++       ++
Sbjct: 253 LVRLALDHFREAMAYTLAIPRTAVRLRLACLWPILIGLETLRQLVRN--EVWLDPAQVSK 310

Query: 284 LVR 286
           + R
Sbjct: 311 IDR 313


>gi|32349572|gb|AAP56087.1| phytoene synthase [Zea mays]
 gi|32349576|gb|AAP56089.1| phytoene synthase [Zea mays]
 gi|32349588|gb|AAP56095.1| phytoene synthase [Zea mays]
 gi|32349592|gb|AAP56097.1| phytoene synthase [Zea mays]
 gi|32349598|gb|AAP56100.1| phytoene synthase [Zea mays]
 gi|32349654|gb|AAP56128.1| phytoene synthase [Zea mays]
 gi|32349660|gb|AAP56131.1| phytoene synthase [Zea mays]
 gi|32349662|gb|AAP56132.1| phytoene synthase [Zea mays]
 gi|32349686|gb|AAP56144.1| phytoene synthase [Zea mays]
 gi|32349692|gb|AAP56147.1| phytoene synthase [Zea mays]
 gi|32349696|gb|AAP56149.1| phytoene synthase [Zea mays]
 gi|32349710|gb|AAP56156.1| phytoene synthase [Zea mays]
          Length = 151

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 6/151 (3%)

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVI 170
            F DMIE    D       +  +   Y + ++  +  ++  ++           +     
Sbjct: 1   PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAA 60

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P D L   GL  E    G  ++R    +K   +
Sbjct: 61  LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 120

Query: 231 LGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
               +  +A   +  +      P +  + + 
Sbjct: 121 RARMFFEEAERGVTELSQASRWPVWASLLLY 151


>gi|92118195|ref|YP_577924.1| squalene/phytoene synthase [Nitrobacter hamburgensis X14]
 gi|91801089|gb|ABE63464.1| Squalene/phytoene synthase [Nitrobacter hamburgensis X14]
          Length = 292

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 76/263 (28%), Gaps = 16/263 (6%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  +  P +R  +   Y F      + D A      +   L  ++       
Sbjct: 13  HRDENFPVASWIIHPRHRALILAFYNFVRTADDIADHAELGEKDKLAWLDLFESELLGQG 72

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P +V L + + Q  +P ++ +D+++A   D          +   Y    + 
Sbjct: 73  N------SQPEAVNLRNALAQRSMPPRHAIDVLKAFRMDVTRLRYETWDEVIDYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +      +++            I   +      Y    ++Y P D L A G 
Sbjct: 127 PVGRFM--LDVHGENTSTWAASDALCAGLQINNHLQDCAKDYKNLNRVYLPRDALAASGA 184

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVL 264
             E     + +  +   +   A      L + R     I  D+        I    + ++
Sbjct: 185 SVEMLGGDKATPALLQCLHALAARTEALLDEGRPLAAEI-RDIRLGLEVAVIRMFADGIV 243

Query: 265 KHAQNHGFKIVSHSHTPNQLVRP 287
              +      +S +     +   
Sbjct: 244 ALLKVR--DPLSETVHLKPVQLL 264


>gi|226225867|ref|YP_002759973.1| farnesyl-diphosphate farnesyltransferase [Gemmatimonas aurantiaca
           T-27]
 gi|226089058|dbj|BAH37503.1| farnesyl-diphosphate farnesyltransferase [Gemmatimonas aurantiaca
           T-27]
          Length = 352

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 77/288 (26%), Gaps = 35/288 (12%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------- 68
              + F    L  +     L   + P     ++   Y        V D            
Sbjct: 14  QDAARFCEAILPAVSRTFALGIKVLPGDLGQAVLDAYLLCRIADTVEDAPGIEPDVKAAL 73

Query: 69  --------NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLP--NQYFL 118
                          R     +        L     +   +E  S + Q        +  
Sbjct: 74  FDDFLASFTDAAALTRFTAGVEALTGDLAHLTLTRNTSLVLEHFSRLPQRTQDVVRHWVA 133

Query: 119 DMIEAHFF----DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE-------RYSASL 167
           +M                I    +++ Y + ++  + ++ T +           RY+   
Sbjct: 134 EMSVGMRKFVLLYPNGIRIQTVDEYKEYCYYVAGTVGYMLTDLWHEHSPSIGAQRYAILR 193

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
              +    A     ++  + +   +   +Y P ++L A G  +   L+ +   +   A+ 
Sbjct: 194 ERCRAFAEALQTVNILKDVAVDAEKENSVYVPQELLEAHGSTQSRILAPELLSKNRAALS 253

Query: 227 IFAELGLKYLFKAREEMRYILPDVFP----AFIPVSITESVLKHAQNH 270
              +L    L +AR  +  I            +P+ +  + L+     
Sbjct: 254 QLIQLAWHDLEEARIYLLDIPRRAVSIRLFCILPLLLAYATLRDLVQS 301


>gi|32349604|gb|AAP56103.1| phytoene synthase [Zea mays]
 gi|32349648|gb|AAP56125.1| phytoene synthase [Zea mays]
 gi|32349650|gb|AAP56126.1| phytoene synthase [Zea mays]
 gi|32349656|gb|AAP56129.1| phytoene synthase [Zea mays]
 gi|32349664|gb|AAP56133.1| phytoene synthase [Zea mays]
 gi|32349666|gb|AAP56134.1| phytoene synthase [Zea mays]
 gi|32349676|gb|AAP56139.1| phytoene synthase [Zea mays]
 gi|32349678|gb|AAP56140.1| phytoene synthase [Zea mays]
 gi|32349682|gb|AAP56142.1| phytoene synthase [Zea mays]
 gi|32349690|gb|AAP56146.1| phytoene synthase [Zea mays]
 gi|32349700|gb|AAP56151.1| phytoene synthase [Zea mays]
 gi|32349704|gb|AAP56153.1| phytoene synthase [Zea mays]
 gi|32349706|gb|AAP56154.1| phytoene synthase [Zea mays]
 gi|32349714|gb|AAP56158.1| phytoene synthase [Zea mays]
          Length = 151

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 6/151 (3%)

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVI 170
            F DMIE    D       +  +   Y + ++  +  ++  ++           +     
Sbjct: 1   PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIASESKATTESVYSAA 60

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P D L   GL  E    G  ++R    +K   +
Sbjct: 61  LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 120

Query: 231 LGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
               +  +A   +  +      P +  + + 
Sbjct: 121 RARMFFEEAERGVTELSQASRWPVWASLLLY 151


>gi|325982949|ref|YP_004295351.1| Squalene/phytoene synthase [Nitrosomonas sp. AL212]
 gi|325532468|gb|ADZ27189.1| Squalene/phytoene synthase [Nitrosomonas sp. AL212]
          Length = 352

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 66/302 (21%), Gaps = 37/302 (12%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-- 77
           D  +    L+ +     L     P   R  +   Y        + D     I +  +L  
Sbjct: 9   DEQYQDYILQGVSRTFALTIPQLPEPLRRIIGNAYLLCRITDTIEDDNALTIEQTRQLSD 68

Query: 78  ------------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
                       + +              +         +++R     N      +E   
Sbjct: 69  MFAEVVCGNASAEEFSLKLHPLLSDQTIPAEHDLIKNTPAVIRITHSFNPVQRKALERCV 128

Query: 126 FDSYNDS-----------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV----- 169
                             + D      Y + ++  +  + T +        +        
Sbjct: 129 RIMAQGMADYQETESLEGLKDLSAMNQYCYYVAGVVGEMLTELFCDYSPEINAHKPVLMK 188

Query: 170 -IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G    +  ++  +     RG  + P DI    G +      G N  +    +   
Sbjct: 189 LAVSFGQGLQMTNILKDIWDDRKRGVCWLPQDIFLKNGFNLSKLQPGMNDTKFQAGLAEL 248

Query: 229 AELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
             +   +L  A      I              + +    L     H  +  S        
Sbjct: 249 LGVAKGHLLNALIYTNLIPSHEKGIRRFCLWAIGMAILTLNKINRH--RNFSEGAQVKIS 306

Query: 285 VR 286
            R
Sbjct: 307 RR 308


>gi|32349596|gb|AAP56099.1| phytoene synthase [Zea mays]
 gi|32349658|gb|AAP56130.1| phytoene synthase [Zea mays]
 gi|32349668|gb|AAP56135.1| phytoene synthase [Zea mays]
 gi|32349672|gb|AAP56137.1| phytoene synthase [Zea mays]
 gi|32349674|gb|AAP56138.1| phytoene synthase [Zea mays]
 gi|32349680|gb|AAP56141.1| phytoene synthase [Zea mays]
 gi|32349684|gb|AAP56143.1| phytoene synthase [Zea mays]
 gi|32349688|gb|AAP56145.1| phytoene synthase [Zea mays]
 gi|32349698|gb|AAP56150.1| phytoene synthase [Zea mays]
 gi|32349702|gb|AAP56152.1| phytoene synthase [Zea mays]
 gi|32349708|gb|AAP56155.1| phytoene synthase [Zea mays]
          Length = 151

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 6/151 (3%)

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVI 170
            F DMIE    D       +  +   Y + ++  +  ++  ++           +     
Sbjct: 1   PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAA 60

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P D L   GL  E    G  ++R    +K   +
Sbjct: 61  LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 120

Query: 231 LGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
               +  +A   +  +      P +  + + 
Sbjct: 121 RARMFFEEAERGVTELSQASRWPVWASLLLY 151


>gi|289706466|ref|ZP_06502820.1| phytoene/squalene synthetase [Micrococcus luteus SK58]
 gi|289556785|gb|EFD50122.1| phytoene/squalene synthetase [Micrococcus luteus SK58]
          Length = 298

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/291 (9%), Positives = 62/291 (21%), Gaps = 35/291 (12%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITR 73
                  + +R        AC   P   R  ++ +Y        V D        +    
Sbjct: 15  TAHAAAAQVIRRYSTSFSWACRTLPRQARQDVATIYAMVRVADEVVDGVAVAAGLDEAGI 74

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L  ++   ES        +  P       + R++ +  +       +   D      
Sbjct: 75  RAVLDDYERACES--AMASGFATDPVLHAFADVARRHGITPELTRPFFASMRADLGIREH 132

Query: 134 FDCKQFEHYAFRISSRLIHLATMIL---------DSERYSASLRVIKYAGIAQFIGQLIC 184
              +  + Y    +  +  +   +             +           G A      + 
Sbjct: 133 G-AESLDAYIHGSAEVVGLMCLQVFLSLPGTRARTPGQRQELRAQASRLGAAFQKVNFLR 191

Query: 185 QLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
            L   +H  G+ Y P       G         +                   L  A   +
Sbjct: 192 DLAADHHELGRTYLP-------GAAPGVLTEAR--------KAELVAEVRADLDAALPGI 236

Query: 244 RYILPDV-FPAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLS 292
           R + P       +   +  ++    +      +           +      
Sbjct: 237 RALDPGAGRAVALAHGLFVALADRIEETPAAELAHRRVRVPDRQKARIAAR 287


>gi|297155030|gb|ADI04742.1| hypothetical protein SBI_01621 [Streptomyces bingchenggensis BCW-1]
          Length = 307

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 72/249 (28%), Gaps = 7/249 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRIS--LSFLYYFHTELMRVRDTARNP 70
            +     D     + +       YLA  L  P   +   ++ +  F      + D+    
Sbjct: 14  SDPTLRDDYARQRKLVARYRRSSYLAVRLLLPRPLLPHLITAI-AFMHRTDNLLDSGPEA 72

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
                  +W K++ E      + ES  P    LL  V  +        D ++A   +   
Sbjct: 73  ERPAAYARWEKEVREGLA---VGESDHPAIRPLLYTVSAHPDFRARVDDFLDAAATELEF 129

Query: 131 DSIFDCKQFEHYAFRIS-SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                   ++ Y  + +    + +A +I   +  S      +              L   
Sbjct: 130 TGFATEADYQRYVDQYALPAFMLIAGLIAGEDPPSGYREACRTYIDGSQRLDFANDLSED 189

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
              G+L      L A G+        +++      ++       + L  +R  +    P+
Sbjct: 190 LAEGRLNLARSTLDAHGVTPADLEGARDTPGTRSLLEHLLGQARQSLAASRSLVDLAPPE 249

Query: 250 VFPAFIPVS 258
             P F  V 
Sbjct: 250 GRPLFRAVI 258


>gi|296138209|ref|YP_003645452.1| Squalene/phytoene synthase [Tsukamurella paurometabola DSM 20162]
 gi|296026343|gb|ADG77113.1| Squalene/phytoene synthase [Tsukamurella paurometabola DSM 20162]
          Length = 269

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 62/272 (22%), Gaps = 31/272 (11%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           +R       LA  + P   R  ++ +Y        V D    P+     L   +    + 
Sbjct: 19  IRQYSTSFSLASRMMPRRVRSHITSIYGLVRVADEVVDG-ACPVDPRAHLDALE--VATE 75

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                  S         +  R      +       +   D         +    Y +  +
Sbjct: 76  RAIETGFSTDLVVHAFANTARATGFGTELTRPFFASMRADLTPAPH-TAESLAQYIYGSA 134

Query: 148 SRLIHLATMILDS----ERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDIL 202
             +  +             Y A     K  G A      +  L       G+ Y P    
Sbjct: 135 EVVGLMCLRAYLHGAAPSDYEALASDAKRLGAAFQKINFLRDLTDDELRLGRAYLPELT- 193

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITE 261
                                A         + L +AR  +  +  DV       + +  
Sbjct: 194 -------------------PDAYAAALADAREDLEQARRGIARLPGDVRRGVRAAADLYS 234

Query: 262 SVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLS 292
           ++L   +  G     +         +   ++ 
Sbjct: 235 ALLHRLEAAGLDGARAGRVRVPAASKLLAVVR 266


>gi|255964366|gb|ACU44500.1| phytoene synthase [Elaeagnus umbellata]
          Length = 135

 Score = 95.9 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 3/120 (2%)

Query: 39  CLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISP 98
            LL  P  R ++  +Y +      + D           L  W+   E   +     S   
Sbjct: 1   TLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPKALDRWESRLEDLFE---GNSFDM 57

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
               L   V ++ +  Q F DMIE    D +     +  +   Y + ++  +  ++  ++
Sbjct: 58  LDAALSDTVARFPVDIQPFKDMIEGMRMDLWKSRYKNFDELYLYCYYVAGTVGLMSVPVM 117


>gi|32349670|gb|AAP56136.1| phytoene synthase [Zea mays]
          Length = 151

 Score = 95.9 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 6/151 (3%)

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVI 170
            F DMIE    D       +  +   Y + ++  +  ++ +++           +     
Sbjct: 1   PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVLVMGIATESKATTESVYSAA 60

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P D L   GL  E    G  ++R    +K   +
Sbjct: 61  LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 120

Query: 231 LGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
               +  +A   +  +      P +  + + 
Sbjct: 121 RARMFFEEAERGVTELSQASRWPVWASLLLY 151


>gi|254455508|ref|ZP_05068937.1| phytoene synthase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082510|gb|EDZ59936.1| phytoene synthase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 284

 Score = 95.9 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 76/263 (28%), Gaps = 35/263 (13%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKG 90
                  A    P       S LY F   +  + D   +   ++     +K+        
Sbjct: 11  YAKSFNWAGFFLPKQTYKKCSSLYDFCRVVDNIADDKNSIKLKENEFNAFKN------HF 64

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSR 149
           +     +P    +  I+ ++ +  +   D+ +    D      +   K+   Y++R++  
Sbjct: 65  IQKNYNNPIIKNMWEIIDEFSISLKVVNDLFDGIQSDIKQTVKLNSKKELLIYSYRVAGT 124

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           +  +   IL   + S+    I   GIA  +  +   +    + G+ Y             
Sbjct: 125 VGLMMAKILKVNKKSSLKSAID-LGIAMQLTNISRDVVEDLNNGRSYI------------ 171

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHA- 267
                   ++          +L  K+   +   +  I         +   +   +     
Sbjct: 172 --------NENFDDIKSTL-QLAEKFYESSFYSINEIPISFRFSILVARRVYRKIGYKIL 222

Query: 268 -QNH--GFKIVSHSHTPNQLVRP 287
            + +   +K  S     + L + 
Sbjct: 223 NKKNLENYKA-SGKIFVSNLEKL 244


>gi|91762748|ref|ZP_01264713.1| Phytoene synthase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718550|gb|EAS85200.1| Phytoene synthase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 283

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 25/239 (10%), Positives = 63/239 (26%), Gaps = 30/239 (12%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKG 90
                  A    P       S LY F   +  + D       +   L             
Sbjct: 10  YAKSFNWAGFFLPKNIYEKCSSLYDFCRTIDNIADDKNELSIKKKNL------LIFKNNF 63

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS-YNDSIFDCKQFEHYAFRISSR 149
           +     +     +  ++ +  +  +   D+ +    D          K+   Y++R++  
Sbjct: 64  INKNFDNLIIKNMWILMEENKISIKIVEDLFDGIESDLNEVVKFNKKKELLIYSYRVAGT 123

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
           +  +   IL  +  ++    I   GIA  +  +   +    +  + Y             
Sbjct: 124 VGLMMAKILGVQNKNSMKSAID-LGIAMQLTNISRDVIEDMNNNRFYI-----------N 171

Query: 210 ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKHA 267
             F + +N+            +   +   +   ++ I      A +    I   +    
Sbjct: 172 HDFETIKNT----------LSMADLFYESSFASIKEIPFRFRFAILVARRIYRKIGAKI 220


>gi|170744393|ref|YP_001773048.1| squalene synthase HpnC [Methylobacterium sp. 4-46]
 gi|168198667|gb|ACA20614.1| squalene synthase HpnC [Methylobacterium sp. 4-46]
          Length = 294

 Score = 95.5 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 81/254 (31%), Gaps = 13/254 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             D +  +A  L  P +R  +   Y F      V D A    +R +       +   +  
Sbjct: 13  HRDENFPVASHLIHPRHRRPILAFYDFVRAGDDVADNAGLDPSRKVA-----LLDGLAAA 67

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
                   P +  L + + +  L  ++ LD+++A   D+         +  HY    +  
Sbjct: 68  LTGTGPDDPEAAPLRAALAERGLSPRHALDLLDAFRMDARKSRYASFDELMHYCRYSAMP 127

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLD 208
           +      +   +  +A+         A  I   +      + +  ++Y P D++   G+ 
Sbjct: 128 VGRFVLDVHGEDP-AATWAASDAICAALQIINHLQDCGKDFSQLDRVYLPEDLMATHGVA 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQ 268
                + + S  +   I   A   L  L + R  +  ++ D   A    +I    L    
Sbjct: 187 AGDLGAPRASPGLRAVIGTLAHRCLDLLHEGRA-LPDLIEDTRLAMEIAAIHR--LAVML 243

Query: 269 NHG---FKIVSHSH 279
             G      +S   
Sbjct: 244 ARGLTARDPLSQRV 257


>gi|293396145|ref|ZP_06640425.1| squalene synthase [Serratia odorifera DSM 4582]
 gi|291421278|gb|EFE94527.1| squalene synthase [Serratia odorifera DSM 4582]
          Length = 343

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/276 (11%), Positives = 74/276 (26%), Gaps = 36/276 (13%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------------NPITRDMRL 77
                L     P   +  +   Y        + D                 + +     +
Sbjct: 12  SRTFALTIPQLPSELQPVVINAYLLCRMADTIEDEPTISAEDNHNIGLAFLDVVQGKTPI 71

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVR---QYDLPNQ-----YFLDMIEAHFFDSY 129
           Q + D           ++     +    I+    +++ P Q         M+        
Sbjct: 72  QPFADNTFQRLSEATPDAERKLFLHFPKILHITGKFNQPQQDAVFRCIKIMLAGMAQYHA 131

Query: 130 N---DSIFDCKQFEHYAFRISSRLIHLATMIL------DSERYSASLRVIKYAGIAQFIG 180
               D +      +HY +  +  +  + T +        +          +  G    + 
Sbjct: 132 IARADGLPSLVSLQHYCYCAAGVVGEMLTDLFLEYEPAIACDRHTLYAQSRSFGQGLQLT 191

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  L   ++RG  + P D+L   G+DR S    QN   ++  I    +L    L    
Sbjct: 192 NILKDLWEDHNRGICWLPKDVLARHGVDRSSLSRDQNDPVLAAVINELIDLAHASLLDGL 251

Query: 241 EEM-----RYILPDVFPAFIPVSITESVLKHAQNHG 271
           +         +          + +    L++ ++  
Sbjct: 252 DYALSFTGPKLRGIRRFCLWTIGLALLTLRNIRSSP 287


>gi|114328644|ref|YP_745801.1| farnesyl-diphosphate farnesyltransferase [Granulibacter
           bethesdensis CGDNIH1]
 gi|114316818|gb|ABI62878.1| farnesyl-diphosphate farnesyltransferase [Granulibacter
           bethesdensis CGDNIH1]
          Length = 280

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/262 (8%), Positives = 64/262 (24%), Gaps = 13/262 (4%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKGLI 92
           + +    +    +R  ++  Y F      + D    +   +  RL   + +         
Sbjct: 22  ENFPVSRIVRRKWRPHVNAYYAFARNADDIADHPDLSANEKISRLDLMEAVLLGHADHGS 81

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
                P +  L   +    +  ++  D++ A   D+         +   Y    +  +  
Sbjct: 82  -----PTASRLRDSLALTGIDPRHATDLLVAFRRDAIKHRYESWDELLDYCRYSAMPVGR 136

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDILGAVGLDRES 211
               +      +           +  +   +           + Y P DIL A G     
Sbjct: 137 YMLDLHGESLQT--YPSSDALCASLQVLNHLQDCGKDLASLDRCYLPADILDAHGARIAD 194

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKHAQN 269
                 S  +   +        +   +A               + +   + E + +  + 
Sbjct: 195 LRRSSCSPALRQVLDDLLNRTERLNVEAAPLSGLTADRWLRVNVAMIHRLAERLAQRLR- 253

Query: 270 HGFKIVSHSHTPNQLVRPWYML 291
                ++       +     + 
Sbjct: 254 -HGDPLARRVKLRGIDIALSLF 274


>gi|148254412|ref|YP_001238997.1| putative phytoene synthase [Bradyrhizobium sp. BTAi1]
 gi|146406585|gb|ABQ35091.1| putative phytoene synthase [Bradyrhizobium sp. BTAi1]
          Length = 292

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 77/263 (29%), Gaps = 12/263 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             D +  +A  +  P +R  +   Y F      + D    P    +RL    +      +
Sbjct: 13  HRDENFPVASWIIRPEHRALILAFYNFVRTADDIADHPSLPGDEKLRLLDLLE-----AE 67

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
                     +V L   +    +  ++ LD++ A   D       +  +  HY    +  
Sbjct: 68  LTGTGETQDVAVGLRRALAARGMAPRHALDLLVAFRMDVTKLRYENWDEVIHYCRYSAMP 127

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLD 208
           +      +      +A+            I   +      Y    ++Y P D L   G  
Sbjct: 128 VGRFM--LDVHGESTATWPASDAICAGLQINNHLQDCAKDYKALNRVYLPRDALAEAGAT 185

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKH 266
            E   + + +  +   ++  A      L + R+    +    F   I V  +  + ++  
Sbjct: 186 VEMLGAPKAAPPLLTCLQKLAVRNAALLEEGRDLNSGVKDFRFGLEIAVIQAFADRIVAM 245

Query: 267 AQNHGFKIVSHSHTPNQLVRPWY 289
            +      +S     + +     
Sbjct: 246 LKVR--DPLSERVHLSPMGMLGL 266


>gi|331697460|ref|YP_004333699.1| squalene synthase HpnC [Pseudonocardia dioxanivorans CB1190]
 gi|326952149|gb|AEA25846.1| squalene synthase HpnC [Pseudonocardia dioxanivorans CB1190]
          Length = 327

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/295 (10%), Positives = 78/295 (26%), Gaps = 32/295 (10%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTEL------------------MRV-RDTARNP 70
           +   +  +A  + P   R  L  +Y     +                   R   D     
Sbjct: 26  ERSENFPVALRVLPARTRAHLRAVYDVVRAIDDIGDGDDDPGRRVGTHPDRADPDRTDTN 85

Query: 71  ITRDMRLQWWKDIFESSTKGL----------IAESISPFSVELLSIVRQYDLPNQYFLDM 120
            T   R    +    +                   + P    L+  VR   L  + F  +
Sbjct: 86  RTATNRTDTERADRTARLHAFCADLRRVWDGPPGPVDPVLQRLVPTVRACGLAREPFERL 145

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK--YAGIAQF 178
           + A+  D +            Y    +  +  +   +  ++    SL   +      A  
Sbjct: 146 VAANLADQHVTRYRTWDDLLGYCVLSAEPIGRMVLAVFGADAPDGSLVQRRSDRICTALQ 205

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           + +    +     RG++Y P + + A G+      +      +   +    E     L +
Sbjct: 206 VLEHCQDVAEDLGRGRVYLPAEDMAAFGVTEADLTAPHTPTTVRALVARETERASALLDE 265

Query: 239 AREEMRYILPDVFPAFI-PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
               +  +      A    ++         +   F +++ S    +     +++ 
Sbjct: 266 GAPLLGQLHGWARLAVAGYLAGGRGAADALRRSRFDVLAGSPRTRRRDVAHHLVR 320


>gi|50306959|ref|XP_453457.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642591|emb|CAH00553.1| KLLA0D08866p [Kluyveromyces lactis]
          Length = 441

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 84/302 (27%), Gaps = 27/302 (8%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
           S D       L+          +   P  R ++   Y     L  V D    +P  +   
Sbjct: 36  SADLTRCHELLKLTSRSFAAVIMELHPELRNAVMLFYLVLRALDTVEDDMTIDPKIKIPV 95

Query: 77  LQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           L+ +    +  +         E      V+   I+ +       +  +I+       N  
Sbjct: 96  LREFDSKLDLPSWYFDGNGPNEKDRAVLVDFPCILNELHKLKPEYQRVIKEITGKMGNGM 155

Query: 133 -------------IFDCKQFEHYAFRISSRLI------HLATMILDSERYSASLRVIKYA 173
                        +     ++ Y   ++  +        +      ++ Y  ++ + +  
Sbjct: 156 ADYILDENFNLNGLQTVADYDLYCHYVAGLVGDGLTQMLVLAGFGSNDLYDENVHLYEDM 215

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGL 233
           G+      +I         G+ ++P +I          F   +N+ +    I       +
Sbjct: 216 GLFLQKTNIIRDYAEDLADGRSFWPKEIWSLYAEKLSDFAKPENTQQGLYCINHLVLNAM 275

Query: 234 KYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            ++      +  I          IP  +  + L     +  K++  +    +    + +L
Sbjct: 276 THIESVLHYLASIHEQSSFQFCAIPQVMAIATLSLVFANP-KVMHENVKIRKGTTCYLIL 334

Query: 292 SS 293
            S
Sbjct: 335 KS 336


>gi|167617080|ref|ZP_02385711.1| squalene/phytoene synthase family protein [Burkholderia
           thailandensis Bt4]
 gi|257140974|ref|ZP_05589236.1| squalene/phytoene synthase family protein [Burkholderia
           thailandensis E264]
          Length = 349

 Score = 94.8 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 83/302 (27%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
            L+ +    YL   + P   R  +   Y        + DT+  P  + + L         
Sbjct: 13  LLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72

Query: 78  ------QWWKDIFESSTKGLIAESISPF-----SVELLSIVRQYDLPNQYFLDMIEAHFF 126
                    +   E + +   ++  +       ++ +LS +  +D      +        
Sbjct: 73  GVPDPQALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLSAFDRAAVRGVVTTLTEGM 132

Query: 127 DSYNDSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
           +    +  D             Q + Y + ++  +    T +  +        R      
Sbjct: 133 EFDLRTFPDESSGRIVALREWPQLDRYTYLVAGCVGEFWTRMTCAHLPGLLSEREDTMAE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGKDLRIGRCYLPQAMLSEYGLCAEDLLRPDASPRARPLMHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L++     +    I           F P++I    L    ++           +++
Sbjct: 253 VRTTLEHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLQTLALLASN--DAWLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|224166981|ref|XP_002338988.1| predicted protein [Populus trichocarpa]
 gi|222874158|gb|EEF11289.1| predicted protein [Populus trichocarpa]
          Length = 223

 Score = 94.8 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 55/205 (26%), Gaps = 8/205 (3%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND----SIFDCKQFEHYAFRISSRLIHLA 154
               L   VR + LP     D++ A   D +      +  D  +   Y  R ++ +  L 
Sbjct: 20  VFAGLAPQVRAHQLPLALMDDLLSAFAQDVHKTESGTTYADRAELLDYCRRSANPVGRLL 79

Query: 155 TMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS 214
             +   +   +  R       A  +        +   RG+ Y       A G+ RE   +
Sbjct: 80  LHLYGVDDAESLAR-SDAICTALQLINFWQDFSVDLPRGRHYLTDADCSAHGVRREDLRA 138

Query: 215 GQN--SDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKHAQNHG 271
                +  +   +   +      +      +  +   +      V      +L       
Sbjct: 139 EPAALTPAVRALLADQSAWARALMLSGAPLVHRLPGRIGWELRLVVQGGLRILDKVDALQ 198

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIK 296
              +    T  +   P  +  +   
Sbjct: 199 GASLYRRPTVGKTDAPLLLWRALRM 223


>gi|32349652|gb|AAP56127.1| phytoene synthase [Zea mays]
          Length = 151

 Score = 94.8 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 6/151 (3%)

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVI 170
            F DMIE    D       +  +   Y + ++  +  ++  ++           +     
Sbjct: 1   PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAA 60

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P D L   GL  E    G  ++R    +K   +
Sbjct: 61  LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 120

Query: 231 LGLKYLFKAREEMRYILPDVF-PAFIPVSIT 260
               +  +A   +  +      P +    + 
Sbjct: 121 RARMFFEEAERGVTELSQASRWPVWAXXLLY 151


>gi|262479247|gb|ACY68648.1| carRA [Cladonia grayi]
          Length = 201

 Score = 94.8 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 59/171 (34%), Gaps = 9/171 (5%)

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK--------YAGIAQFIGQLI 183
            I D      Y  +++  +      ++     ++     +          GIA     + 
Sbjct: 27  PIKDEAALRLYGAQVAGTVAESCLELVYYHTRTSVSEQQRNRIVQAGGRMGIALQYVNIA 86

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             + +    G++Y P + L   GL  E  +   +S ++ +  +   +  +    ++R  +
Sbjct: 87  RDISVDALNGRVYLPNNWLNEQGLKPEDLVKDPHSIKVEMLRQRLLDSAMAIYHESRGAI 146

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             +  +   P  + V     + +  +  G+K+ +   T  +L R      +
Sbjct: 147 EELPSEARGPMRVAVESYVEIGRVLREPGYKLKAGRATVPKLRRIQVAWKA 197


>gi|226528858|ref|NP_001142243.1| hypothetical protein LOC100274412 [Zea mays]
 gi|194707776|gb|ACF87972.1| unknown [Zea mays]
          Length = 206

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 56/156 (35%), Gaps = 5/156 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
                   + +R +R  DY  YL  L   P  R +      F+ E  R  D   +P T  
Sbjct: 10  SSLRAALSYCVRQVRAYDYHHYLCLLHLAPAMRKAAFTFRAFNIETARAMDVVSDPRTCL 69

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS---YND 131
           MRL WWK+  +      + E   P +  L S++  + +   +    +EA   D+      
Sbjct: 70  MRLLWWKEAVDKVFGNKLVE--HPVAQALSSVIADHKVSKHWLKRSVEARINDANREEGT 127

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL 167
                 + E YA    S ++++       +   A  
Sbjct: 128 IPGTSAELERYAEDTQSTILYMTLQAGGIQSTVADH 163


>gi|21234207|ref|NP_639818.1| putative bifunctional undecaprenyl pyrophosphate
           synthetase/phytoene synthase [Streptomyces coelicolor
           A3(2)]
 gi|42558905|sp|Q9ACU1|CRUP_STRCO RecName: Full=Bifunctional protein CrtB/UppS; Includes: RecName:
           Full=Phytoene synthase; Includes: RecName:
           Full=Undecaprenyl pyrophosphate synthase 3; Short=UPP
           synthase 3; AltName:
           Full=Di-trans,poly-cis-decaprenylcistransferase 3;
           AltName: Full=Undecaprenyl diphosphate synthase 3;
           Short=UDS 3
 gi|13620694|emb|CAC36733.1| putative bifunctional undecaprenyl pyrophosphate
           synthetase/phytoene synthase [Streptomyces coelicolor
           A3(2)]
          Length = 564

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 66/227 (29%), Gaps = 5/227 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           E               R    + + A    P   R SL  +  +     R+ D       
Sbjct: 34  ESPELRAAYEVCEAEARQFAVELWAAAETLPVETRPSLYAIASWSAYTDRIIDEGPLEGR 93

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
            +   QW  D            S  P    L+  VR++ L      + +++   D     
Sbjct: 94  EERLAQWSADTLADLRA---GHSSHPLRRALVDTVRRWGLAEALIEEHLDSARADCAAVP 150

Query: 133 -IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                K    Y    S  L  L   +L+     A   +    G A  +  L   LP    
Sbjct: 151 VFETFKDQRRYLRGCSGALAELWVPLLEPRGPEAFRLMSV-LGEACQVADLFEDLPDDLA 209

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
            G+ Y P   L  +GLD +    G+  + ++  +          L +
Sbjct: 210 AGRCYLPRQDLRGLGLDVDDLRRGEREEALNAFVDAQLAHWRGLLEE 256


>gi|291436351|ref|ZP_06575741.1| squalene/phytoene synthase [Streptomyces ghanaensis ATCC 14672]
 gi|291339246|gb|EFE66202.1| squalene/phytoene synthase [Streptomyces ghanaensis ATCC 14672]
          Length = 311

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 8/298 (2%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDID--YDRYLACLLSPPLYRISLSFLYYFHT 58
           M+++         + +         R     D     + A  L P   R   + L  +  
Sbjct: 15  MLVRRWLDAAGITDPVLRHCYTVCAREASGFDGGRAGWAALRLMPAEARPCTAALVAYGR 74

Query: 59  ELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFL 118
                 DT      R  RL  +     +        S  P     +   R + +P     
Sbjct: 75  RADACADTG-PVEDRQHRLAEF--AEATWAAFAAGGSRDPVLHATVHTYRTFGMPPSLIE 131

Query: 119 DMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQF 178
           DM      D          +   +A ++++    +   +  ++       + ++ G    
Sbjct: 132 DMFTGMQRDVDFRDFTTYAELCQWAVQVNAPFYGVLCALTGNDLTEVQPLLHEH-GDLCQ 190

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           +   +C L      G+LY PL+ L   G+  E   + + +  ++  I   A      L  
Sbjct: 191 LADALCDLSQDLDDGRLYLPLEDLHQFGVRPEDVKAKRWTPPMADLIAFEAARVTGRLPA 250

Query: 239 AREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              E+ +     F           ++      G  ++     P             ++
Sbjct: 251 LAAELEHTPVSPFT-RAVGEHCMLLVAGVLAAGQDVLHRPVQPPMGH-FLNAWRPLMR 306


>gi|77917355|emb|CAI60776.1| phytoene synthase [Crocus sativus]
          Length = 140

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 7/137 (5%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +    LR          LL  P  R ++  +Y +      + D           L  W+
Sbjct: 1   KYAESMLR----PFTWGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASYITPSALDRWE 56

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
              E             F   L   V ++ +  Q F DMI+    D       +  +   
Sbjct: 57  AKLEDLFA---GRPYDMFDAALSDTVSKFPVDIQPFKDMIKGMRMDLKKSRYKNFDELYL 113

Query: 142 YAFRISSRLIHLATMIL 158
           Y + ++  +  ++  ++
Sbjct: 114 YCYYVAGTVALMSVPVM 130


>gi|88854358|ref|ZP_01129025.1| phytoene synthase [marine actinobacterium PHSC20C1]
 gi|88816166|gb|EAR26021.1| phytoene synthase [marine actinobacterium PHSC20C1]
          Length = 288

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 69/282 (24%), Gaps = 31/282 (10%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD---- 82
            +R+       A        R  +  +Y        V D           L   +     
Sbjct: 19  VIRNYSTSFSAASRFLGADVRQHVENIYALVRIADEVVDGGAE-EAGLDLLATTRQLNEL 77

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHY 142
             E+        S +          R+     +      E+   D       D   FE Y
Sbjct: 78  ERETEHAIEQGFSSNLIVHAFALTAREVSFGAELTAPFFESMRMDLSQKEH-DQASFERY 136

Query: 143 AFRISSRLIHLATMILDSER------YSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQL 195
            +  +  +  +   +            S      +  G A      +  L   +   G+ 
Sbjct: 137 VYGSAEVVGLMCLRVFLQGHDVGDEQRSKLEHGARALGAAFQKVNFLRDLADDFETLGRS 196

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF- 254
           YFP   + +                 + A K+     L    +       + P    A  
Sbjct: 197 YFPGIDVASF----------------TEAEKVRLLDDLDADLRDAAIGSELPPSSRKAVA 240

Query: 255 IPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSI 295
           +  S+   + K  +      +V        +V+     +++I
Sbjct: 241 LAHSLFAQLSKRIRATPANELVRTRVRVPDVVKLRLAAAAAI 282


>gi|299138108|ref|ZP_07031288.1| Squalene/phytoene synthase [Acidobacterium sp. MP5ACTX8]
 gi|298600038|gb|EFI56196.1| Squalene/phytoene synthase [Acidobacterium sp. MP5ACTX8]
          Length = 349

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/323 (10%), Positives = 80/323 (24%), Gaps = 58/323 (17%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
            L+ +    Y+   + P   R  +   Y        + DT+  P  + M L         
Sbjct: 13  LLKSVSRSFYITLRVLPAGMRDPIGLAYLLARAADTIADTSLIPPGQRMELLLSLRNQVN 72

Query: 78  ----QWWKDIFESSTKGLIAESISPFS-----VELLSIVRQYDLPNQYFLDMIEAHFFDS 128
               +       +      A+S            L  + +      +   D++       
Sbjct: 73  GTSDEAALRRMSAEVGSQQADSDEKVLLESLGAALTVLSQLSQSDREAVRDIVTTLTTGM 132

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---- 171
                +  D             + + Y + ++  +    T +             +    
Sbjct: 133 EFDLRTFPDEASGRIVALREFSELDQYTYMVAGCVGEFWTKMTFMHVPGTFAGNPEVVLS 192

Query: 172 ---YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  +  L  + S      +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGKDLRIGRCYLPSTMLDRFGLSPQDLLLPETSLPARPLLFEL 252

Query: 229 AELGLKYLFKAREEMRYILPDVFPAFIPV-------------------SITESVLKHAQN 269
            E  L+   +A E    +        +                      +  + +   + 
Sbjct: 253 VEKALENFREAIEYTLCLPAFAVRLRLACLWPILIGLETLLLLVSNDHWLDPAKVSKIRR 312

Query: 270 HG-FKIVSHSHTPNQLVRPWYML 291
              ++I++ S       R   + 
Sbjct: 313 GDVYQIMAASVPLVASNRLLRLW 335


>gi|325528712|gb|EGD05784.1| squalene/phytoene synthase [Burkholderia sp. TJI49]
          Length = 217

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 66/221 (29%), Gaps = 7/221 (3%)

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFD 135
           L+ W+   ++   G    +       L   +R +DL    F  MI+    D+  D    D
Sbjct: 1   LERWRADIDACFAGRPPRA----LAALEREIRAFDLQRDDFHAMIDGMAMDAAEDICAPD 56

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
               + Y  R++S    L+  I              + G A  +  ++  +       + 
Sbjct: 57  EPTLDLYCDRVASAAGRLSVRIFGMPEAEGIKL-SHHLGRALQLTNILRDIDDDAAINRC 115

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAF 254
           Y P ++L   G+      +      +        E  L++  +A   M       V    
Sbjct: 116 YLPRELLAREGIAITDPATIARDPALPRVCATLVERALEHFRQADAVMDTCARAQVKAPR 175

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           I       +L+ A   GF          +          ++
Sbjct: 176 IMSGAYRCILEAAVARGFAAPRAPLRKPKARMLMIAARYAL 216


>gi|257067652|ref|YP_003153907.1| phytoene/squalene synthetase [Brachybacterium faecium DSM 4810]
 gi|256558470|gb|ACU84317.1| phytoene/squalene synthetase [Brachybacterium faecium DSM 4810]
          Length = 298

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/279 (9%), Positives = 66/279 (23%), Gaps = 23/279 (8%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            +         A  L     R  +  +Y          D        + R +  +++   
Sbjct: 35  VIAGYSTSFGWASRLLEEPVRTHVRSIYALVRIADETVDGPDPAFPAEERSRLLEELAAE 94

Query: 87  STKGLIA-ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
           + + +    S +          R+Y +  +       +   D       D      Y   
Sbjct: 95  TARAVAGARSTNLVVQAFAVTARRYGIGAELIDPFFASMRADLT-VCAHDPVSLAQYVHG 153

Query: 146 ISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDI 201
            +  +  +   +      +   R     +  G A      +  L   +   G+ YFP   
Sbjct: 154 SAEVVGLMCLRVFVDGSDAEHDRLAPAARALGAAFQKVNFLRDLAEDHDELGRTYFPGLD 213

Query: 202 LGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SIT 260
             A                         +     L  A   +  +      A      + 
Sbjct: 214 PDAFDDAHRD---------------RLLDDIDADLAHAASALPQLPASSRRAVGAAHGLY 258

Query: 261 ESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            ++ +  +     +I       +   + + +  + +  R
Sbjct: 259 AALSRRLRATPAAQIRRARVRVSDPEKAFVLARAVLAGR 297


>gi|300859497|ref|YP_003784480.1| phytoene synthase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686951|gb|ADK29873.1| phytoene synthase [Corynebacterium pseudotuberculosis FRC41]
 gi|302207180|gb|ADL11522.1| Phytoene synthase [Corynebacterium pseudotuberculosis C231]
 gi|302331741|gb|ADL21935.1| Phytoene synthase [Corynebacterium pseudotuberculosis 1002]
 gi|308277433|gb|ADO27332.1| Phytoene synthase [Corynebacterium pseudotuberculosis I19]
          Length = 397

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 67/312 (21%), Gaps = 45/312 (14%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR----- 68
           E           + +         A  +  P  R  +  LY        + D        
Sbjct: 92  ENFDQMSIKAAEKVITSYSTSFSFATYVLEPELRTDIRNLYAMVRTADEIVDGTARAAGL 151

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            PI     L  ++              + P         R+     ++      +   D 
Sbjct: 152 TPIQTAKLLTHYEREV--ILAPTQRLHVDPVMHAYAISARRCQFKQEHVRAFFASMRRDI 209

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMI-------------------LDSERYSASLRV 169
            +      + +  Y +  +  +  +                          +        
Sbjct: 210 TSGECTTDEDYHGYIYGSAEVIGLMCLSAFLVKRPSSRSQDADQRTYSYSQKELDIMGEG 269

Query: 170 IKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
            +  G A      +        H G+ YFP                   +D      +  
Sbjct: 270 ARALGAAFQKVNFLRDWQEDSTHLGRHYFPG-------------APSLLTDSFK---QTI 313

Query: 229 AELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFK-IVSHSHTPNQLVR 286
                  L  A + +  +           + +   +    +      I+ +  +   L +
Sbjct: 314 IADIRTDLTAAFQAIPLLPDSAKAGVTAAAELFTELTNILEATSAAEIMKNRASVPLLTK 373

Query: 287 PWYMLSSSIKKR 298
              M  + IK R
Sbjct: 374 MKIMARALIKAR 385


>gi|218665783|ref|YP_002426526.1| phytoene/squalene synthetase family protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218517996|gb|ACK78582.1| phytoene/squalene synthetase family protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 347

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/294 (9%), Positives = 67/294 (22%), Gaps = 41/294 (13%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP------ 70
             R   +  ++L+ +     L     P   R ++   Y        + D    P      
Sbjct: 6   LERALAYQAQSLQVVSRTFALTIPQLPEALRDAVGNGYLLCRIADTIEDDPDMPWEKKAC 65

Query: 71  --------ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYD----------- 111
                   +        +     +     + E+          +V               
Sbjct: 66  WQAKFLQVVEGADDPAAFAAALGADLSPEMPEAEHDLIRHTPEVVAITHSLNPTQQAALS 125

Query: 112 LPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDS------ERYSA 165
              +     +      +    + D    + Y + ++  +  + T +         E  + 
Sbjct: 126 RCVRIMGMGMAEFQQHASLQGLADMAALDRYCYVVAGVVGEMLTSLFVEFEPLLAEHDAE 185

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
             R+    G    +  ++  +   + RG  + P  +    G D      G         +
Sbjct: 186 MQRLAVSFGQGLQMTNILKDIWDDWQRGVSWMPRALFQRHGCDIAGVRPGSRDPAFQAGL 245

Query: 226 KIFAELGLKYLFKAREEMRYILPD-------VFPAFIPVSITESVLKHAQNHGF 272
                +   +L  A      I             A     +    L+    +  
Sbjct: 246 TELLGIAANHLQNALRYTLLIPAGQTGMRDFCLWAIAMAVL---TLRRIAENPA 296


>gi|84515620|ref|ZP_01002982.1| hypothetical protein SKA53_03141 [Loktanella vestfoldensis SKA53]
 gi|84510903|gb|EAQ07358.1| hypothetical protein SKA53_03141 [Loktanella vestfoldensis SKA53]
          Length = 255

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 90/280 (32%), Gaps = 27/280 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D +R+ A + +P   R  L  +Y F+ E++R     + P+  +MRLQW
Sbjct: 2   SFDACAALVEKADPERFRAIMAAPVAARRLLFPVYAFNVEIIRAPWLTKEPMIAEMRLQW 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D  E    G            L +++             I A  +D Y D   D   F
Sbjct: 62  WRDALEEIKAGGRV-RKHEVVDALAAVLDAQGADL--LDATIAARRWDIYTDPFADWDDF 118

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y    S   +     +L ++       ++     A  +  L+  LP+   R +   P 
Sbjct: 119 DAYIHATSGAPMITTARLLGNKN----AALVSDFAYATGVANLLRALPVLLDRQRQPLPD 174

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
               A                    I   A+  L  L  AR   R +        +    
Sbjct: 175 PSAAA--------------------IAALAQRALARLDAARIARRDLPHHASAPLLLGHA 214

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            + +L  A  H    +  +     L +   +   +++  +
Sbjct: 215 AKPILTQAAKHPAAALHGNLELTPLRQSMRLAHIALRGWW 254


>gi|149185741|ref|ZP_01864057.1| phytoene synthase [Erythrobacter sp. SD-21]
 gi|148830961|gb|EDL49396.1| phytoene synthase [Erythrobacter sp. SD-21]
          Length = 241

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 66/205 (32%), Gaps = 2/205 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
             +          +  +  L  +   D+I     D+   +  + +    Y + ++  +  
Sbjct: 10  QPTADFAFDAFGLVADECGLTYEMANDVIGGFALDATGFAPKNERDMMRYCYHVAGAVGI 69

Query: 153 LATMILDSERYS-ASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
           +   ++        +L      G+A  I  +   +       ++Y P + L  VGL    
Sbjct: 70  MMAHVMGVHPDDGETLDRANDLGLAFQIANISRDIVEDAAANRVYLPAEWLAEVGLAPGE 129

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNH 270
               +N   ++  +     L  K+   AR   + +      A +  + I  ++ +   + 
Sbjct: 130 HARPENRFILASLMPRMIALMEKHEAAARLGAKKLRFRHRWAVLSAANIYGAIGRKVLDR 189

Query: 271 GFKIVSHSHTPNQLVRPWYMLSSSI 295
           G          +   + W+M ++  
Sbjct: 190 GQLAWDTRTRVSGPEKAWHMTTAFF 214


>gi|324518498|gb|ADY47119.1| Unknown [Ascaris suum]
          Length = 386

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 5/173 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--TARNP 70
           + K         +   R+ D+  Y+A LL P   + S+  L  F+ EL  +RD       
Sbjct: 184 DNKSAMSALDHCIALTRNRDFANYIAALLMPTEVQPSVFALLAFNVELAVIRDQIERNTG 243

Query: 71  ITRDMRLQWWKDIFESSTKGLIAE-SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                RLQ+WKD  E+            P ++ L   VR  D+  +    ++ A      
Sbjct: 244 TAGIYRLQFWKDTIEAIYGDRGGPIPKQPVALALQCFVR--DVDMKLLSCLVLARQQTLG 301

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQL 182
           +      +  + Y       L+ L   +L   R     R  +        G  
Sbjct: 302 DRPFKSIEAVQQYGIDTYGALMKLLMRVLAQNRERMMHRDWEAFQCGNQRGSF 354


>gi|239928019|ref|ZP_04684972.1| phytoene synthase [Streptomyces ghanaensis ATCC 14672]
          Length = 297

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 8/298 (2%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDID--YDRYLACLLSPPLYRISLSFLYYFHT 58
           M+++         + +         R     D     + A  L P   R   + L  +  
Sbjct: 1   MLVRRWLDAAGITDPVLRHCYTVCAREASGFDGGRAGWAALRLMPAEARPCTAALVAYGR 60

Query: 59  ELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFL 118
                 DT      R  RL  +     +        S  P     +   R + +P     
Sbjct: 61  RADACADTG-PVEDRQHRLAEF--AEATWAAFAAGGSRDPVLHATVHTYRTFGMPPSLIE 117

Query: 119 DMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQF 178
           DM      D          +   +A ++++    +   +  ++       + ++ G    
Sbjct: 118 DMFTGMQRDVDFRDFTTYAELCQWAVQVNAPFYGVLCALTGNDLTEVQPLLHEH-GDLCQ 176

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           +   +C L      G+LY PL+ L   G+  E   + + +  ++  I   A      L  
Sbjct: 177 LADALCDLSQDLDDGRLYLPLEDLHQFGVRPEDVKAKRWTPPMADLIAFEAARVTGRLPA 236

Query: 239 AREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
              E+ +     F           ++      G  ++     P             ++
Sbjct: 237 LAAELEHTPVSPFT-RAVGEHCMLLVAGVLAAGQDVLHRPVQPPMGH-FLNAWRPLMR 292


>gi|331234622|ref|XP_003329970.1| bifunctional enzyme CarRP [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308960|gb|EFP85551.1| bifunctional enzyme CarRP [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 665

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 61/303 (20%)

Query: 25  LRNLRDIDYDRYLACLLSPP--LYRISLSFLYYFHTELMRVRDTARNPITRD-------- 74
           L  L       Y A  + P     R     LY F  E   + D A +             
Sbjct: 278 LEVLSVASKSFYSASFIFPNFCAIRSKFVILYGFCRETDDLIDHAVDKQEARKVVEMCKE 337

Query: 75  -MRLQW-----------------------------WKDIFESSTKGLIAESISPFSVELL 104
            + L W                             ++   E      + E   P  +   
Sbjct: 338 FLDLLWPTDHKDAKDVRSNPGLFPPDTDLGSKEIEFQSRLEEFVIAKVPEKSRPTFLIFS 397

Query: 105 SIVRQYDLPNQYFLDMIEAHFFD---SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE 161
           ++  +  L  + F ++I  + +D     N  I +      Y+  ++  +  +   I+   
Sbjct: 398 TM--RKILRREPFDELISGYEYDSIEFVNKEIKNEDDLMQYSRWVAGSVGEMCVSIMWWV 455

Query: 162 RYSASLRVIK--------YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV--GLDRES 211
             ++   + +          G A  +  +   +      G++Y P         GL    
Sbjct: 456 YGASENEIERQSILRAANEMGCALQLINIARDVKEDAKIGRIYVPKVWFEGQVDGLRLTD 515

Query: 212 FLSGQNSDRI-----SLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLK 265
           + + +N   +      +      E+  +Y  ++++ +  +     P       +   + +
Sbjct: 516 WENLKNQTGLETFPYEIVAGKLLEIANQYQARSKQAIERLPLAFRPGIRAATRVYIEIGE 575

Query: 266 HAQ 268
             +
Sbjct: 576 KIR 578


>gi|134293514|ref|YP_001117250.1| farnesyl-diphosphate farnesyltransferase [Burkholderia
           vietnamiensis G4]
 gi|134136671|gb|ABO57785.1| farnesyl-diphosphate farnesyltransferase [Burkholderia
           vietnamiensis G4]
          Length = 355

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 81/312 (25%), Gaps = 42/312 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-------- 77
             L+++    YL   + P   R  +   Y        + DTA     R   L        
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPERRATLLNGLRDEI 72

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        +  T+             +  ++     Q D        ++      
Sbjct: 73  EQLGDGAALSRSLDDVTRMQADSHEHVLLGSMEPMLALLRAQPDADRAAIRKVVATLTSG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+      + Y + ++  +    T +  +   +A         
Sbjct: 133 MEFDLRTFPDEQSGQVASLPTRDALDRYTYLVAGCVGEFWTDMTAAHTRAARGWDCADMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++   P     G+ Y P D+L A G+     ++   S R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCPKDLRIGRCYLPDDVLAAHGVGVAELMAPHASARARGVLVD 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
              + L     A      I             P+ I    L+    H   +         
Sbjct: 253 LLRVTLDLYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLERLAGHDAWLDPARPAKVP 312

Query: 284 LVRPWYMLSSSI 295
             R + ++++S+
Sbjct: 313 RKRIYRIMAASL 324


>gi|327405195|ref|YP_004346033.1| farnesyl-diphosphate farnesyltransferase [Fluviicola taffensis DSM
           16823]
 gi|327320703|gb|AEA45195.1| farnesyl-diphosphate farnesyltransferase [Fluviicola taffensis DSM
           16823]
          Length = 368

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/285 (10%), Positives = 87/285 (30%), Gaps = 22/285 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--RNPITRDM 75
           + D  +    L+ +     +     P   +  +   Y     L  + D     N + +DM
Sbjct: 42  TDDLSYCYEALKKVSRSFAVVIQQLPEDLKNPVCLFYLILRGLDTIEDDMNIDNTVKKDM 101

Query: 76  RLQWWKDIFESST---KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS---- 128
            L +   I +           +      +    ++R+Y      +  +I     +     
Sbjct: 102 LLTFADRINKEEFTLENVGDTQDYQDLMLHFDKVIREYQKLGSEYKAVITEITNEMAIGM 161

Query: 129 ---YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIG 180
               + ++   + +  Y + ++  +    + +  + +   S+++         G+     
Sbjct: 162 NKYAHKTVESYEDWNDYCYYVAGLVGIGLSKLFLASKLETSVKLSDKSLSNEMGLFLQKT 221

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            +I        +G++++P +             + + S  +S          L ++    
Sbjct: 222 NIIRDFAEDLEQGRIFWPEESWKNKARTLNELQADEKS-GLSAL-NEVVVNALGHVPACL 279

Query: 241 EEMRYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           E +  +          IP  +  + LK   N+   ++  +    +
Sbjct: 280 EFLDCLDDQKVFRFCAIPQLMAIATLKELYNNP-DVLHKNVKIRK 323


>gi|296448365|ref|ZP_06890253.1| squalene synthase HpnC [Methylosinus trichosporium OB3b]
 gi|296254126|gb|EFH01265.1| squalene synthase HpnC [Methylosinus trichosporium OB3b]
          Length = 293

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 70/218 (32%), Gaps = 7/218 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             D +  +A +   P +R  +   Y F      + D     ++ D +L            
Sbjct: 13  HGDENFPVASVFIAPRHRAPILAFYDFVRAADDISD--HATLSADEKLAMLD---RMEAA 67

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
            L +      ++ L  I+ +  L  ++  D++ A   D       D      Y    +  
Sbjct: 68  LLGSGEPIAVALRLRDILAERALEPRHAQDLLAAFRRDVTQTRYRDFDDLLDYCRYSAMP 127

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLD 208
           +      +   +R +A+         A  I   +      +    ++Y P D L A G  
Sbjct: 128 VGRYVLDVHGEDR-AATYGANDALCAALQIINHLQDCAKDFRTLDRVYLPQDALAAHGAS 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            E   +   S +++  ++  A    + L ++      I
Sbjct: 187 VEMLAAPAASPQLAAVLRELAARTSELLERSASFAERI 224


>gi|91779604|ref|YP_554812.1| farnesyl-diphosphate farnesyltransferase [Burkholderia xenovorans
           LB400]
 gi|91692264|gb|ABE35462.1| farnesyl-diphosphate farnesyltransferase [Burkholderia xenovorans
           LB400]
          Length = 348

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 74/303 (24%), Gaps = 45/303 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--------------RNPIT 72
            L+ +    YL   + P   R  +   Y        + DT+              R  + 
Sbjct: 13  LLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPQRRLTLLLSLREQVN 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFD 127
                        +   G   +S     +      L  + +  +   +   +++      
Sbjct: 73  GATDDAALFQRMAAEVAGQQVQSDEKVLLESLGPALDVLSQLNEFDRKAVREIVSTLTEG 132

Query: 128 SYN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK--- 171
                 +  D             + + Y + ++  +    T +  +              
Sbjct: 133 MEFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHMPGTLKERADVMA 192

Query: 172 ----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P  +L   GL  +  L   NS R    +  
Sbjct: 193 RRGVRFGKALQMTNVLRDCGKDLRIGRCYLPQTMLDRYGLSPQDLLRPDNSVRARPLMIE 252

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQN----HGFKIVSHSHTPNQ 283
                + +  +A +    I        +       +L   +                 ++
Sbjct: 253 LLRKTVDHFREALDYTLAIPASAVRLRLASL--WPILIGLETLILLADNDAWLDPQKVSK 310

Query: 284 LVR 286
           + R
Sbjct: 311 VRR 313


>gi|121997378|ref|YP_001002165.1| squalene/phytoene synthase [Halorhodospira halophila SL1]
 gi|121588783|gb|ABM61363.1| squalene/phytoene synthase [Halorhodospira halophila SL1]
          Length = 283

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 80/263 (30%), Gaps = 12/263 (4%)

Query: 37  LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
            A  L+P   R  L  +  F  E+ R+    +        L WW+       +       
Sbjct: 23  YALRLAPAHQREPLQAIAAFTGEIRRIPWHTQEAEVGRATLHWWRTELARILE---GGGQ 79

Query: 97  SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATM 156
            P +  L + V ++ LP      +++        D      +    A R ++  + LA  
Sbjct: 80  HPLAAPLAAAVHEHQLPGAELRAILDEADRALDGDRPETFPEQLRLAERHAAAPLRLAAQ 139

Query: 157 ILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQ 216
           +L  +  +         G A  + + +    +    G    P + L   G+  E  L   
Sbjct: 140 VLVGDASATGYAT--ALGSAVGLTRSLRLQGLAARYGDSDLPRETLRQAGVPAEGPLLQS 197

Query: 217 NSDRISLAIKIFAELGLKY--LFKAREEMRYILPDVFPAFIPVSITESVLKH-----AQN 269
           +   +   ++  A        LF A             A  PV+   ++ +       + 
Sbjct: 198 DGTALPSLLRALAVQADAIAPLFPAARGQAPEDRRRVAALRPVTAYAALHQALIAEILRR 257

Query: 270 HGFKIVSHSHTPNQLVRPWYMLS 292
              +++    T   L + W    
Sbjct: 258 GPAELIRGRLTLTPLRKVWVAWR 280


>gi|292491410|ref|YP_003526849.1| Squalene/phytoene synthase [Nitrosococcus halophilus Nc4]
 gi|291580005|gb|ADE14462.1| Squalene/phytoene synthase [Nitrosococcus halophilus Nc4]
          Length = 366

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/302 (9%), Positives = 71/302 (23%), Gaps = 35/302 (11%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-------- 68
           +S D  +    L  +     L     PP  +  ++  Y        + D           
Sbjct: 10  YSIDKAYQDYILPGVSRTFALTIPQLPPKLQEVVANGYLLCRIADTIEDEPSLSIDQKKF 69

Query: 69  ------NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
                   +      +++              +          I+R            +E
Sbjct: 70  FSNTFIAVVAGQASAKFFARALYPLLSEHTLATERELIQNTPRIIRITHSFTPRQRAALE 129

Query: 123 AHFFDSYNDSI-----------FDCKQFEHYAFRISSRLIHLATMILD------SERYSA 165
                  +               D +  + Y + ++  +  + T +        +    A
Sbjct: 130 RCVRIMCDGMPRFQNTASLRGLADMETMDRYCYFVAGVVGEMLTELFCDYSPGANRNREA 189

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
              ++   G    +  ++  +     R   + P  I    G D +    G         +
Sbjct: 190 LHSLMISFGQGLQMTNILKDIWDDRKREICWLPRSIFEQTGFDLDKLTPGHYQPAFGDGL 249

Query: 226 KIFAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
           +    +   +L  A      I P+           + +    L+    H     S     
Sbjct: 250 QHLIGIAHAHLRNALTYTLLIPPNEVGIRRFCLWAIGMAILTLRKLHRHRDFSASQQVKI 309

Query: 282 NQ 283
           ++
Sbjct: 310 SR 311


>gi|32349694|gb|AAP56148.1| phytoene synthase [Zea mays]
          Length = 151

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 5/142 (3%)

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVI 170
            F DMIE    D       +  +   Y + ++  +  ++  ++           +     
Sbjct: 1   PFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIASESKATTESVYSAA 60

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              GIA  +  ++  +     RG++Y P D L   GL  E    G  ++R    +K   +
Sbjct: 61  LALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNFMKRQIK 120

Query: 231 LGLKYLFKAREEMRYILPDVFP 252
               +  +A   +  +      
Sbjct: 121 RARMFFEEAERGVTELSQASRW 142


>gi|159470235|ref|XP_001693265.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277523|gb|EDP03291.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 196

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 5/199 (2%)

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF-- 126
             +   +R QWW+D   ++ +        P ++ L  ++             I       
Sbjct: 1   ESVVGQIRFQWWRDAVRAAYEDRP--PNHPVAIALAHVLHSPGPTPPPAPARIIDVRESD 58

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
                   D    E YA   +S+L++L       +   A      + G A  I  L+  +
Sbjct: 59  FLDPQPPLDMGALESYAEGTASQLLYLQLAAAGIKHRDA-DHAASHLGRAVGITTLLRGM 117

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
           P+H    + Y P+D+     + +E   SG  S+ +       A L   +L +AR     +
Sbjct: 118 PVHAAARRSYLPVDLCAEARVSQEDVYSGVVSEGLRDVAHKVASLAKGHLDEARRLAPRL 177

Query: 247 LPDVFPAFIPVSITESVLK 265
            P      +P    +  LK
Sbjct: 178 PPGAAGLMLPAVAVDRYLK 196


>gi|169742866|gb|ACA66014.1| squalene synthase [Panax ginseng]
          Length = 415

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 79/298 (26%), Gaps = 19/298 (6%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           LKF  ++  K+         F    L  +     L      P  R ++   Y     L  
Sbjct: 20  LKFAARHAEKQIPP-EPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDT 78

Query: 63  VRDTARNPITRD--MRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDL 112
           V D    P      + + + + I++                +     S   L +   Y  
Sbjct: 79  VEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAFLELGSGYQE 138

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVI 170
             +     + A         +     ++ Y   ++  +    + +  +      A+  + 
Sbjct: 139 AIEDITMRMGAGMAKFICKEVETINDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDPLS 198

Query: 171 KYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
              G+      +I       +   + ++++P  I        E     +NS +    +  
Sbjct: 199 NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSAKAVQCLND 258

Query: 228 FAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L +     + M  +          IP  +    L     +  ++        +
Sbjct: 259 MVTDALVHAEDCLKYMSDLRGPAVFRFCAIPQIMAIGTL-ALCFNNTQVFRGVVKMRR 315


>gi|188592055|ref|YP_001796653.1| squalene/phytoene synthase [Cupriavidus taiwanensis LMG 19424]
 gi|170938429|emb|CAP63416.1| putative Squalene/phytoene synthase [Cupriavidus taiwanensis LMG
           19424]
          Length = 348

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 84/329 (25%), Gaps = 58/329 (17%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + DTA   P  R   L   ++   
Sbjct: 13  LLKGVSRSFYLTLRVLPARMRDPVGLAYLLARAADTIADTALIAPERRLALLLSLREQVN 72

Query: 86  SSTKGLIAESI------------------SPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
                  +                           L ++ +           ++      
Sbjct: 73  GVNARAASMPDFAAEVASRQEQSDERILLESVEHALAALAQLEPADRTAVRQIVSTLTEG 132

Query: 128 SYN--DSIFDC-----------KQFEHYAFRISSRLIHLATMILDSERYSA------SLR 168
                 +  D            ++ +HY + ++  +    T +  +    A       LR
Sbjct: 133 MEFDLRTFPDERAGHIVSLRKVEELDHYTYLVAGCVGEFWTRMAAAHMQGAIGDTETMLR 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  +  L    S R    +   
Sbjct: 193 HGIRFGKALQMTNVLRDCGKDLRIGRCYLPQTMLERHGLHAQDLLRPDASTRARPLMFEL 252

Query: 229 AELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHG------------- 271
               L++  +A      I             PV I    LK    +              
Sbjct: 253 VRHTLEHFDQALAYTLAIPARFVRLRLACLWPVLIGMETLKRLVRNEDWLDPARASRLPR 312

Query: 272 ---FKIVSHSHTPNQLVRPWYMLSSSIKK 297
              ++I++ S       R      + +K+
Sbjct: 313 SGVYRILAGSLPAVLSNRLLRFWFARLKR 341


>gi|27378112|ref|NP_769641.1| hypothetical protein blr3001 [Bradyrhizobium japonicum USDA 110]
 gi|27351259|dbj|BAC48266.1| blr3001 [Bradyrhizobium japonicum USDA 110]
          Length = 322

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 75/261 (28%), Gaps = 12/261 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
           D D +  +A  +  P +R  +   Y F      + D     +  D +L +  D+ E+   
Sbjct: 41  DRDENFPVASWIIHPRHRALILAYYNFVRTADDIAD--HATLPGDQKLAYL-DLLEAELL 97

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
           G            L   + +  +  ++ LD++ A   D       +  +  HY    +  
Sbjct: 98  GKGDTQAEAVV--LRRALAERGMAPRHALDVLIAFRMDVTKLRYENWDEVIHYCRYSAMP 155

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLD 208
           +      +      + +         A  I   +      +    ++Y P D L A G  
Sbjct: 156 VGRFMLDVHGESTSTWAA--SDALCAALQINNHLQDCGKDFRELNRVYLPRDALAASGAS 213

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQ 268
            E     Q+   +   ++  A      L + R     I  D         I ++      
Sbjct: 214 VEQLGLAQSPPAMLACLQSLAVRNEALLDEGRSLTAEI-RDFRLGIDVAVI-QAYADRIV 271

Query: 269 NHG--FKIVSHSHTPNQLVRP 287
                   +      N+    
Sbjct: 272 RLLKVRDPLRERVHLNKFELL 292


>gi|126726935|ref|ZP_01742774.1| Probable Phytoene/squalene synthetase [Rhodobacterales bacterium
           HTCC2150]
 gi|126703893|gb|EBA02987.1| Probable Phytoene/squalene synthetase [Rhodobacterales bacterium
           HTCC2150]
          Length = 261

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 95/275 (34%), Gaps = 28/275 (10%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
               +   D DR+ + + +P  +R  L  LY F+ E+ R     + P+  +MRLQWW+D+
Sbjct: 13  CAAQVEWADIDRFKSAMTAPLKFRGDLMVLYAFNLEVARAPWVTKEPMIAEMRLQWWRDV 72

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            E       A      +  L ++VR+  +       MI A  +D Y D+  D   F+ Y 
Sbjct: 73  VEGIDADK-APRAHEVATPLDALVRRACISCDDLDAMISARRWDIYKDAFEDEAHFDRYL 131

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
                 L+  A   L + R       I+  G A  + +     P     G++ F      
Sbjct: 132 TATGGNLMWAAAKALGAPRIHEKA--IRDFGYASALARWFQAAPALEDAGRIPFV----- 184

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESV 263
                          D  +   +  A + L  L   R            A      T+ +
Sbjct: 185 ---------------DGRADTFRDMAAVALDRLKPTRNL-----GPAKAALRAGWQTKKI 224

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           L+       K+ +     ++  +   +   S+  R
Sbjct: 225 LRQVIIDPTKVANAQLGLSEFAKSRSLFFHSVLGR 259


>gi|112253710|gb|ABI14439.1| squalene synthase [Taxus cuspidata]
          Length = 409

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/284 (10%), Positives = 75/284 (26%), Gaps = 18/284 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDM 75
              D  F    L+ +               R ++   Y     L  V D    P  T+  
Sbjct: 33  LDPDLAFCYTMLQKVSRSFAFVIQQLGLELRNAVCVFYLVLRGLDTVEDDMSIPVDTKLP 92

Query: 76  RLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
            L  +       +              +     S   L++ ++Y    +     + A   
Sbjct: 93  ILTNFHQHIYDPSWHFSCGVNDYKELMDQFHHVSTAFLALGKRYQEGIEEITKRMGAGMA 152

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLIC 184
                 +   + ++ Y   ++  +    + +  +      A   +    G+      +I 
Sbjct: 153 KFIRQEVESVEDYDEYCHYVAGLVGLGLSRLFRAACLEDLAPDFLSNSMGLFLQKTNIIR 212

Query: 185 QLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
                 +   + ++++P +I      + E     + S      +       LK+     +
Sbjct: 213 DYLEDINEIPKSRMFWPHEIWSKYVPNLEDLKEEECSKEAVQCLNEMITNALKHANDCLK 272

Query: 242 EMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            M  +          IP  +  + L     +  ++        +
Sbjct: 273 YMAALKNPAIFRFCAIPQIMALATL-EICYNNLQVFRRVVKIRR 315


>gi|146278111|ref|YP_001168270.1| phytoene/squalene synthetase-like protein [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145556352|gb|ABP70965.1| Phytoene/squalene synthetase-like protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 255

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 26/279 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+ A + +PP  R  L  LY F+ E+ R     R P+  +MRLQ+
Sbjct: 2   SLEACAGLVERGDPDRHAAAMAAPPAARARLLPLYAFNLEVARAPWVTREPMIAEMRLQF 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D+ E + +G +       +  L  ++R+  LP      MIEA   D + +   D   F
Sbjct: 62  WRDVIEEAAQGRV--RAHEVAAPLAEVIREAALPVPLLDAMIEARRRDIWAEPFEDEAAF 119

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             +    ++    +    L       +   ++  G A  +   +  +P    RG+   P 
Sbjct: 120 AAHIEATAA--GLMWASALALGAPGDAEGAVRGIGWAAGLAAWLQAVPELEARGRQPLP- 176

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D    A+   A+ GL  L + R     +   V PA +P   
Sbjct: 177 -------------------DGRPEAVARLAQQGLARLAEGRRG--RLPAAVHPALLPAWQ 215

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
             ++L+ A     ++ S +   ++  R W +L S+   R
Sbjct: 216 AGALLRLAAAEPGRVASGTLQLSEFSRRWRLLRSAFTGR 254


>gi|296130725|ref|YP_003637975.1| Squalene/phytoene synthase [Cellulomonas flavigena DSM 20109]
 gi|296022540|gb|ADG75776.1| Squalene/phytoene synthase [Cellulomonas flavigena DSM 20109]
          Length = 304

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 68/269 (25%), Gaps = 32/269 (11%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            LR       +   L     R  +  +Y        V DT R P      L   ++    
Sbjct: 22  VLRAYSTSFGMGTRLLGARTRDDIRAIYALVRLADEVVDTYRGPDAGAE-LDELEEQVAR 80

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
           + +     S +          R+  + +        +   D    +  D + +E Y +  
Sbjct: 81  ALR--TEYSTNVVVHAFARTARRVGIGHAEVDPFFASMRADLTVRTH-DRESYERYVYGS 137

Query: 147 SSRLIHLATMIL----------DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQL 195
           +  +  +                 E   A++   +  G A      +  L       G+ 
Sbjct: 138 AEVVGVMCLRAFLDAERRPGDPPVEPDPAAVDGARALGAAFQKINFLRDLATDSDDLGRA 197

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y P       G+D E   +      +       A        +AR  +  +      A  
Sbjct: 198 YLP-------GVDPEHLTADDVRSVLGEIGGDLA--------RARAALPLLPTRARCAVA 242

Query: 256 P-VSITESVLKHAQNHGFKIVS-HSHTPN 282
              ++ + +L          +        
Sbjct: 243 ATTALYDRLLADLAATPVATLRTRRVRVP 271


>gi|83942573|ref|ZP_00955034.1| hypothetical protein EE36_16072 [Sulfitobacter sp. EE-36]
 gi|83846666|gb|EAP84542.1| hypothetical protein EE36_16072 [Sulfitobacter sp. EE-36]
          Length = 255

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 89/283 (31%), Gaps = 30/283 (10%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       +   D  R+ A + +P   R  L  LY F+ E+ R     +  +  +MR
Sbjct: 3   FDADLSACAAIIERADPLRFRASMAAPVAARRVLFPLYAFNIEVARAPWVTQETMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+ +      +       +  L   +            +  A  +D Y D+  D 
Sbjct: 63  LQWWRDVCDEIANRGVV-RRHEVATPLALAIS--PEDAVLLDTLAAARRWDIYRDAFEDA 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
             F+ Y  + +  L+ +A          A    ++ A     +   +  +P    +G++ 
Sbjct: 120 AHFDAYIDQTAGHLMWVAAR----SLGPAEETTVRDAAYGAGVAAWLHAIPQLVEQGRVP 175

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
                                 D     +   A+     L +AR     I     PA   
Sbjct: 176 LL--------------------DGTDAGVVALAQKARARLRQARANRGKISKAARPAMYS 215

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           V   + VL  A     ++   +     +        + +  R+
Sbjct: 216 VGAADKVLSAAIAAPGRV--SAAELPPMNDFALSWRA-LSGRW 255


>gi|217979362|ref|YP_002363509.1| squalene synthase HpnC [Methylocella silvestris BL2]
 gi|217504738|gb|ACK52147.1| squalene synthase HpnC [Methylocella silvestris BL2]
          Length = 291

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 71/267 (26%), Gaps = 14/267 (5%)

Query: 29  RDIDYDRY-LACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFES 86
           +    + + +A  L  P  R  +   Y F      V D     P  +   L  ++     
Sbjct: 10  KTHKGENFPVASFLIAPERRAPILAYYQFARGADDVADNGALTPQQKLDGLDLFEATLLG 69

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI 146
            ++ +   +  P    L        L  ++ LD++ A   D+         +   Y    
Sbjct: 70  KSEAVP--AAKPLRAAL---AADRRLTARHALDLLTAFRMDAVKTRYASFDELMTYCAYS 124

Query: 147 SSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAV 205
           ++ +      +        +         A  I   +      Y    ++Y P D+L + 
Sbjct: 125 AAPVGRFV--LDVHGESETTWTASDALCSALQIINHMQDCAADYRNLDRVYLPQDLLKSC 182

Query: 206 GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSIT--ESV 263
               E   +   +  +  A+          + +  +    +  D   +     I      
Sbjct: 183 CAPVEELAAPSATPHLRAALDRLVAKTEVLIEQGGKLPGQV-RDFRLSLETAVIATLARR 241

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           L          +S     ++       
Sbjct: 242 LNLILKQR-DPLSEETHLSKPAALGLA 267


>gi|84503358|ref|ZP_01001427.1| hypothetical protein OB2597_04425 [Oceanicola batsensis HTCC2597]
 gi|84388268|gb|EAQ01219.1| hypothetical protein OB2597_04425 [Oceanicola batsensis HTCC2597]
          Length = 257

 Score = 92.4 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 87/279 (31%), Gaps = 29/279 (10%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D       +   D  R+ A + +P   R+ L  LY F+ E+ R     + P+   MRLQW
Sbjct: 6   DIGACAALVERGDPVRFRAAMAAPVPARMVLFPLYAFNIEVSRAPWVTQEPMIAQMRLQW 65

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D  E    G +          L   +R  D+P      ++ A   D       D  + 
Sbjct: 66  WRDALEEIASGGVV-RRHEVVTPLAMAIRAEDVPA--LDRLVAAREADIEPGGFADLAEL 122

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y    +  LI +A   L      A             +   +  +P            
Sbjct: 123 LTYLEATAGGLIGVAARRLGGGAALAGAAGRALG-----VANWLMAVPA----------- 166

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
             L A G                   +  AEL        R     +     PAF P++ 
Sbjct: 167 --LEAAGRRPLDIGGADVPALAQAGQEAMAEL--------RAGWSSVPSAARPAFFPLAS 216

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
           T  VL+ A+    ++ + +  P        +  ++   R
Sbjct: 217 TPGVLRRAKAEPDRVRADTLEPGPFGARLRLALTAATGR 255


>gi|325095343|gb|EGC48653.1| squalene synthetase [Ajellomyces capsulatus H88]
          Length = 472

 Score = 92.4 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 84/299 (28%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++EK  S         L           +   P   + +   Y     L  + D    
Sbjct: 31  HERDEKNVSETQKKCFEFLELTSRSFSAVIMELHPELLLPVCLFYLALRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P  T++  L+ + +I E            E      V+  ++V ++ L    +  +I+  
Sbjct: 91  PLQTKEPLLRDFHNILEKDGWSFNGNRPEEKDRELLVQFHNVVTEFKLIKPAYRTIIKDT 150

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                                +   K+++ Y + ++  +    T +     ++    + +
Sbjct: 151 TKKMGSGMADYCRKAELDTAKVKTVKEYDLYCYYVAGIVGEGLTRLFVEAGFANPALLER 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   Y   + ++P +I      D E     +N +       
Sbjct: 211 TELFISMGLFLQKTNIIRDVKEDYVDNRCFWPQEIWSKHVDDFEDLFKRENREAALNCNS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L +  +    +  +          IP S+  + L         I   +    +
Sbjct: 271 EMILNALGHADECLFYLAGLREQSVFNFCAIPQSMAIATL-ELCFRNEAIFERNIKITK 328


>gi|186474231|ref|YP_001861573.1| squalene/phytoene synthase [Burkholderia phymatum STM815]
 gi|184196563|gb|ACC74527.1| Squalene/phytoene synthase [Burkholderia phymatum STM815]
          Length = 351

 Score = 92.4 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 45/303 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ-------- 78
            L+ +    YL   + P   R  +   Y        + DTA  P  + + L         
Sbjct: 13  LLKGVSRSFYLTLRILPVGMRDPIGLAYLLARAADTIADTALIPPEQRLALLLALREQVN 72

Query: 79  ------WWKDIFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFD 127
                  +     S   G   +S     +      L  + +  D       +++      
Sbjct: 73  GATGDGEFARRLASEVAGQQTQSDEKVLLESIAPALDVLSQLDDADRAAVREIVTTLTTG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYS-------ASL 167
              D             ++    + + Y + ++  +    T +  +             L
Sbjct: 133 MEFDLRTFPDEGSGQIVALRTWDELDRYTYLVAGCVGEFWTKMTYAHLPGTLKTGSVTML 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P  +L   GL  +  L  Q S R    +  
Sbjct: 193 ERGVRFGKALQMTNVLRDCGKDLRIGRCYLPSVMLDRFGLTPQMLLDPQASKRAQPLMHE 252

Query: 228 FAELGLKYLFKAREEMRYILP---DVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L +   A +    I      +      P+ I    L    ++           ++
Sbjct: 253 LVRKSLDHFRAALDYTLAIPRFSLRLRLACMWPIVIGLETLLLLVDN--AHWLEPAKVSK 310

Query: 284 LVR 286
           + R
Sbjct: 311 VQR 313


>gi|2780361|dbj|BAA24289.1| squalene synthase [Panax ginseng]
 gi|41224629|dbj|BAD08242.1| squalene synthase [Panax ginseng]
          Length = 415

 Score = 92.4 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 79/298 (26%), Gaps = 19/298 (6%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           LKF  ++  K+         F    L  +     L      P  R ++   Y     L  
Sbjct: 20  LKFAARHAEKQIPP-EPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDT 78

Query: 63  VRDTARNPITRD--MRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDL 112
           V D    P      + + + + I++                +     S   L +   Y  
Sbjct: 79  VEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAFLELGSGYQE 138

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVI 170
             +     + A         +     ++ Y   ++  +    + +  +      A+  + 
Sbjct: 139 AIEDITMRMGAGMAKFICKEVETINDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDSLS 198

Query: 171 KYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
              G+      +I       +   + ++++P  I        E     +NS +    +  
Sbjct: 199 NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSAKAVQCLND 258

Query: 228 FAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L +     + M  +          IP  +    L     +  ++        +
Sbjct: 259 MVTDALVHAEDCLKYMSDLRGPAIFRFCAIPQIMAIGTL-ALCFNNTQVFRGVVKMRR 315


>gi|209542568|ref|YP_002274797.1| hypothetical protein Gdia_0386 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530245|gb|ACI50182.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 292

 Score = 92.4 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 83/254 (32%), Gaps = 20/254 (7%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-----PITRDMRLQWW 80
              R  D DR+   L  P   R     L  F+ E +R      +     P+   +RLQWW
Sbjct: 19  EIARRSDPDRFFCTLFLPASVREDAFTLIAFNHESVRALSGMHSRSVAGPMAGLIRLQWW 78

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           ++I E ++           +  L +++R   +     L +++A   +             
Sbjct: 79  REIVEGASHP------HEVADPLRALIRAGRVRRDTLLGILDAREAELEG-LPDWAAWRA 131

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
                       +A +          LR +++ G A  +G L+  +      G+   P  
Sbjct: 132 AMRAGAGGVQAAIAQVAGTGTTDPDLLRAVEFLGAAYGVGGLLRHMGAVLAGGRCPLPEP 191

Query: 201 ILGAVGLDRESFLSGQ--NSDRISLAIKIFAELGLKYLFK------AREEMRYILPDVFP 252
            L   GL  ES   G       ++       + G ++L +      A      +   V  
Sbjct: 192 ALQEFGLSGESIRDGAGIQGADLTPLRARLRDEGREFLAQAGMQVAAGAGRVRLPRAVRA 251

Query: 253 AFIPVSITESVLKH 266
           A +P ++    L  
Sbjct: 252 AGLPGALARRDLGR 265


>gi|114321837|ref|YP_743520.1| farnesyl-diphosphate farnesyltransferase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114228231|gb|ABI58030.1| farnesyl-diphosphate farnesyltransferase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 373

 Score = 92.4 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/328 (10%), Positives = 81/328 (24%), Gaps = 48/328 (14%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
                D  +    L  +     L     P   R +++  Y        + D         
Sbjct: 19  HQVQADKAYQDSVLPGVSRTFALTIPQLPEYLRGTVTNAYLLCRIADTIEDHLPGDSVAK 78

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPN-------------------- 114
                W    + + +    E   PF  EL  +  +   P                     
Sbjct: 79  ---AEWFKRLDIALR--GQEPAEPFGRELARMFPRQSTPRTELELVRNTHRVLRVTRALP 133

Query: 115 --------QYFLDMIEAHFFDSYNDSIF---DCKQFEHYAFRISSRLIHLATMILDS--- 160
                   +    + +       N       D   F+ Y + ++  +  + T++      
Sbjct: 134 AWQRRSVVRCVRVLAKGMARFQANKRPDGLADMAAFDDYCYHVAGVVGEMLTVLFCGYST 193

Query: 161 ---ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQN 217
                    +R+    G A  +  ++  +     RG  + P DI    G   ++      
Sbjct: 194 VMGRHRQELMRMSLSFGQALQMTNILKDVWNDRERGVCWLPRDIFAGAGCPLDADADWAG 253

Query: 218 SDRISLAIKIFAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHG-- 271
                  ++    +   +L +  E +  I              + +    L +   H   
Sbjct: 254 DPHFHEGMRRMVAIARGHLDRGFEYVLQIPVSEPGIRRFCIWALGMAALTLGNIHRHPQF 313

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                   +   +     +  + +++ +
Sbjct: 314 RDPAEIKISRRTVRGLMTITPALVRRDW 341


>gi|150866906|ref|XP_001386657.2| hypothetical protein PICST_33737 [Scheffersomyces stipitis CBS
           6054]
 gi|149388162|gb|ABN68628.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 388

 Score = 92.4 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 100/350 (28%), Gaps = 77/350 (22%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP--------------- 70
           + L   D   Y+     P   R +   +  F+ E+ ++ D   N                
Sbjct: 38  KLLETHDRSSYILAQYVPEPARNAFLAIRAFNLEINKISDGGSNTGSVASKASSQLSKSM 97

Query: 71  --ITRDMRLQWWKDIFESSTKGLIAESIS---PFSVELLSIVR-QYDLPNQYFLDMIEAH 124
              T DM+ ++W D+                 P ++ L   +R   +L   YF   ++  
Sbjct: 98  GISTADMKFKFWSDLVARVFTEDPYSEKDIGEPIAILLRDALRNDLNLDVTYFHQFLQTR 157

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMI---------------LDSERYSASLRV 169
                + +         Y     S+L +    +                 +   S    +
Sbjct: 158 RQFLKSPTFQTVDDICSYGEGTYSQLNYQTQALLLSPSISPSVISLLEQSTSLQSKVSDI 217

Query: 170 IKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLS------------GQ 216
             + G A  +G +I  +  +   R Q+  P++++    L +ES L               
Sbjct: 218 AAHIGQATAVGAMILGMNYYATSRNQVTLPVNLMSKYDLSQESVLKLAQGHVKEKTEVDA 277

Query: 217 NSDRISLAIKIFAELGLKYLFKAREEM----------------------------RYILP 248
             D++   +   A     ++  AR ++                            +++  
Sbjct: 278 IRDKLKNIVYETATTSNDHILTARAKLSQCKQEINEIVRANMHDQLLQKNSKRWRKFMPD 337

Query: 249 DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +F  F+    T   L   + H F I  H     +    W       ++ 
Sbjct: 338 VIFTPFMVAIPTTLYLNKLEKHDFDIYHHKMQQKEWRLAWTSFKDYYQRT 387


>gi|184201730|ref|YP_001855937.1| phytoene synthase [Kocuria rhizophila DC2201]
 gi|183581960|dbj|BAG30431.1| phytoene synthase [Kocuria rhizophila DC2201]
          Length = 303

 Score = 92.1 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/281 (10%), Positives = 66/281 (23%), Gaps = 35/281 (12%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRDMRLQWWKDIF 84
           +      LAC   P   R  ++ +Y        + D        +       L  ++   
Sbjct: 33  EYSTSFSLACRTLPGPVRRDIAGIYALVRVADEIVDGTARAAGLDDRAVRRALDGYEAAV 92

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           +         S          + R++    +       +   D       D    E Y +
Sbjct: 93  DR--ALETGFSTDLVVHGFADVARRHGFGRELTEPFFASMRADLEVAEH-DGASLEDYIY 149

Query: 145 RISSRLIHLA---------TMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQ 194
             +  +  +          T     E+        +  G A      +  L   + + G+
Sbjct: 150 GSAEVVGLMCLEVFTDMPGTRAQTPEQREMLRSTARRLGAAFQKVNFLRDLGADHDQLGR 209

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
            Y P       G D       + +                 L  A   +  +      A 
Sbjct: 210 TYLP-------GADPAHLTEDRKAAL--------LADLDADLDAAVPGILALDRRARRAV 254

Query: 255 IPV-SITESVLKHAQNHGFKIVS-HSHTPNQLVRPWYMLSS 293
                +   + +  +    + +S    +    V+      +
Sbjct: 255 SMAHGLFTELARRIERVPARELSTRRVSVPTAVKLQIAARA 295


>gi|311740163|ref|ZP_07713995.1| phytoene synthase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304718|gb|EFQ80789.1| phytoene synthase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 291

 Score = 92.1 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/291 (9%), Positives = 64/291 (21%), Gaps = 29/291 (9%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
              S    + +        LA  L     R  +  LY        + D A      D   
Sbjct: 7   QAASRAAAQVMGQYSTSFSLATRLLRGRVRADIRHLYAVVRIADELVDGAAAQAHTDPAA 66

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
                               P         R+     ++ +    +   D  +       
Sbjct: 67  ALDAYEKTILAAPQQRLHTDPVVHAYAITARRCGFHREHLVAFFSSMRADLTHREY-SPS 125

Query: 138 QFEHYAFRISSRLIHLATMILDSERY------SASLRVIKYAGIAQFIGQLICQLPIHYH 191
           + + Y +  +  +  L   I  +E        +A  R  +  G A      +  L     
Sbjct: 126 ELQDYIYGSAEAIGLLCLQIFLAEENVSPADRAAMERGARALGSAFQKINFLRDLREDSS 185

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
                +            +   SG+  +    A         + L  A   +  +     
Sbjct: 186 TLGRTY-----------FQQAPSGRIDEATKSA---LIAEIRRELATAALTIDLLPASAR 231

Query: 252 PAFIPVSITESVLKHAQNH-----GFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                 +    +     N         + +   +     + W    +  ++
Sbjct: 232 VGVSAAA---DIFAELTNRLAATPATALATTRVSVPNHTKAWLAARAVRRR 279


>gi|121999059|ref|YP_001003846.1| squalene/phytoene synthase [Halorhodospira halophila SL1]
 gi|121590464|gb|ABM63044.1| farnesyl-diphosphate farnesyltransferase [Halorhodospira halophila
           SL1]
          Length = 359

 Score = 92.1 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 79/287 (27%), Gaps = 35/287 (12%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-- 77
           +  +    L  +     L     P + R +++  Y        + D +   +     L  
Sbjct: 19  NRAYQEAALPGVSRTFALTIPQLPEVLRDTVTNAYLLCRVADTIEDHSAADVEVKHDLML 78

Query: 78  ------------QWWKDIFESSTKGLIAESISPFSVELLSIVR-------QYDLPNQYFL 118
                       Q      E+        +     V L  ++         +  P    +
Sbjct: 79  GLKEALNGARDPQQLAGQIEAVLDWDTPPAERDLVVSLPRVIAVTGGLPEAHQGPVIRCV 138

Query: 119 DM----IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL------DSERYSASLR 168
            +    +           + D  QFE Y + ++  +  + T +               + 
Sbjct: 139 SIMGEGMARFQRLRSPVGLADRAQFEEYCYYVAGVVGEMLTDLFILEVEGFDGDRDEMMD 198

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
           + +  G+      +I  +     RG  + P +I    G                  I   
Sbjct: 199 LGRRFGLGLQATNVIKDVWADRERGVCWLPREIFTESGCSLGPDADWSEDPGFHRGIGRM 258

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHG 271
            E+G++++  AR  +  I P             +++ + L+  + H 
Sbjct: 259 IEIGVEHMEAARAYILRIPPTQPGIRRFCAWAATMSLATLRQIRRHP 305


>gi|225556399|gb|EEH04688.1| squalene synthetase [Ajellomyces capsulatus G186AR]
          Length = 493

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 84/299 (28%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++EK  S         L           +   P   + +   Y     L  + D    
Sbjct: 31  HERDEKNVSETQKKCFEFLELTSRSFSAVIMELHPELLLPVCLFYLALRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P  T++  L+ + +I E            E      V+  ++V ++ L    +  +I+  
Sbjct: 91  PLQTKEPLLRDFHNILEKDGWSFNGNRPEEKDRELLVQFHNVVTEFKLIKPAYRTIIKDT 150

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                                +   K+++ Y + ++  +    T +     ++    + +
Sbjct: 151 TKKMGSGMADYCRKAELDTAKVKTVKEYDLYCYYVAGIVGEGLTRLFVEAGFANPALLER 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   Y   + ++P +I      D E     +N +       
Sbjct: 211 TELFISMGLFLQKTNIIRDVKEDYVDNRCFWPQEIWSKHVDDFEDLFKRENREAALNCNS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L +  +    +  +          IP S+  + L         I   +    +
Sbjct: 271 EMILNALGHADECLFYLAGLREQSVFNFCAIPQSMAIATL-ELCFRNEAIFERNIKITK 328


>gi|167578978|ref|ZP_02371852.1| squalene/phytoene synthase family protein [Burkholderia
           thailandensis TXDOH]
          Length = 337

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 83/302 (27%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
            L+ +    YL   + P   R  +   Y        + DT+  P  + + L         
Sbjct: 1   MLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 60

Query: 78  ------QWWKDIFESSTKGLIAESISPF-----SVELLSIVRQYDLPNQYFLDMIEAHFF 126
                    +   E + +   ++  +       ++ +LS +  +D      +        
Sbjct: 61  GLPDPQALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLSAFDRAAVRGVVTTLTEGM 120

Query: 127 DSYNDSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
           +    +  D             Q + Y + ++  +    T +  +        R      
Sbjct: 121 EFDLRTFPDESSGRIVALREWPQLDRYTYLVAGCVGEFWTRMTCAHLPGLLSEREDTMAE 180

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  +  L    S R    +   
Sbjct: 181 RGIRFGKALQMTNVLRDCGKDLRIGRCYLPQAMLSEYGLCAQDLLRPDASPRARPLMHAL 240

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L++     +    I           F P++I    L    ++           +++
Sbjct: 241 VRTTLEHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLQTLALLASN--DAWLDPARASKV 298

Query: 285 VR 286
            R
Sbjct: 299 RR 300


>gi|116694163|ref|YP_728374.1| farnesyl-diphosphate farnesyltransferase [Ralstonia eutropha H16]
 gi|113528662|emb|CAJ95009.1| Farnesyl-diphosphate farnesyltransferase [Ralstonia eutropha H16]
          Length = 354

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 77/303 (25%), Gaps = 45/303 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--------------RNPIT 72
            L+ +    YL   + P   R  +   Y        + DT+              R+ + 
Sbjct: 13  LLKGVSRSFYLTLRVLPERMRDPVGLAYLLARAADTIADTSLIPPQRRLALLLSLRDQVN 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISP------FSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                    D   +   G   +              L  + +      Q    ++     
Sbjct: 73  GATADTALADSIATEVAGRQEQQSDERILLESLGPALAVLAQLEPDDRQAVRQIVSTLSE 132

Query: 127 DSYN--DSIFD-----------CKQFEHYAFRISSRLIHL------ATMILDSERYSASL 167
                  +  D            ++ + Y + ++  +         A M     +  A L
Sbjct: 133 GMEFDLRTFPDENAGRIVALREPEELDRYTYLVAGCVGEFWTSMTAAHMPGAIGKPDAML 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
           R     G A  +  ++         G+ Y P  +L   GL  +  L    S R    +  
Sbjct: 193 RRGVRFGKALQMTNVLRDCGKDLRIGRCYLPATMLHQHGLSPQDLLLADASPRARALMLE 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L +  +A      I P           PV I    L     +    +      ++
Sbjct: 253 LVRKTLDHFCEAMTYTLAIHPRFIRLRLACLWPVLIGMETLLLLVRND-DWLD-PAKASR 310

Query: 284 LVR 286
           L R
Sbjct: 311 LQR 313


>gi|296162722|ref|ZP_06845507.1| Squalene/phytoene synthase [Burkholderia sp. Ch1-1]
 gi|295887038|gb|EFG66871.1| Squalene/phytoene synthase [Burkholderia sp. Ch1-1]
          Length = 348

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 75/303 (24%), Gaps = 45/303 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--------------RNPIT 72
            L+ +    YL   + P   R  +   Y        + DT+              R  + 
Sbjct: 13  LLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPQRRLALLLSLREQVN 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFD 127
                        +   G   +S     +      L  + +  +   +   +++      
Sbjct: 73  GATDDAALFQRMAAEVAGQQVQSDEKVLLKSLGPALDVLSQLSEFDREAVREIVSTLTEG 132

Query: 128 SYN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSERY-------SASL 167
                 +  D             + + Y + ++  +    T +  +              
Sbjct: 133 MEFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHMPGTLKERPEIMA 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
           R     G A  +  ++         G+ Y P  +L   GL  +  L   NS R    +  
Sbjct: 193 RRGVRFGKALQMTNVLRDCGKDLRIGRCYLPQTMLDRYGLSAQDLLLPGNSVRARPLMIE 252

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQN----HGFKIVSHSHTPNQ 283
                + +  +A +    I        +       +L   +                 ++
Sbjct: 253 LLRKTVDHFREALDYTLAIPASAVRLRLASL--WPILIGLETLILLVDNDAWLDPQKVSK 310

Query: 284 LVR 286
           + R
Sbjct: 311 VRR 313


>gi|261856142|ref|YP_003263425.1| squalene/phytoene synthase [Halothiobacillus neapolitanus c2]
 gi|261836611|gb|ACX96378.1| squalene/phytoene synthase [Halothiobacillus neapolitanus c2]
          Length = 293

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 74/279 (26%), Gaps = 13/279 (4%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
             R  R I      A L      R +++ +      L  +  T   P     +L WW+  
Sbjct: 16  CERIARPIGSGFRYASLPLRGQERYAITAIKALDKSLEEIVQTVAEPQVARSKLDWWRGA 75

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPN--QYFLDMIEAHFFDSYNDSIFDCKQFEH 141
                      S  P  + LL       L     +    + +                  
Sbjct: 76  LHQ--ATTEGSSNHPVLISLLESTPPTTLEKLVPHLESRLGSALLALDYQGFDTEADLNA 133

Query: 142 YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDI 201
           Y       L  L            +   +   G        +  L     RG +Y   + 
Sbjct: 134 YLDAKGGALFRL--YAQALNLPEETSIKLGALGALGHRIDNLQWLGRDVARGFIYLSAEQ 191

Query: 202 LGAVGLDRESFLSGQNSDRISLA----IKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           L   G++   F     S R+        +       ++L + ++  R   P  F A I +
Sbjct: 192 LEKHGINEADFHRPDRSTRLVPLLQTEYEHIRSEHNRHLLELKQTCRR-PPAFFRALIAL 250

Query: 258 SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
             +   L H    G +++      +   +      ++ +
Sbjct: 251 DQSR--LVHLHRSGLRLLDERPERSPFTQLLTAWWATKR 287


>gi|239615333|gb|EEQ92320.1| squalene synthetase [Ajellomyces dermatitidis ER-3]
 gi|327357686|gb|EGE86543.1| squalene synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 473

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 88/299 (29%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++EK  S         L+          +   P   + +   Y     L  + D    
Sbjct: 31  HERDEKNSSETEKQCFHFLKFTSRSFSAVIMELHPELLLPVCLFYLVLRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA- 123
           P  T++  L+ + +I E            E      V+  ++V ++      +  +I+  
Sbjct: 91  PLQTKEPLLRDFHNILEKDGWSFNGNRPEEKDRELLVQFHNVVTEFKKIKPAYRTIIKDI 150

Query: 124 ------------HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                          +     +   K+++ Y + ++  +    T +     ++    + +
Sbjct: 151 TKKMGSGMADYCRRAELDTAKVKTVKEYDLYCYYVAGIVGEGLTRLFVEAGFANPALLER 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   Y   + ++P +I      + E     +N +       
Sbjct: 211 TELFISMGLFLQKTNIIRDVKEDYVDNRCFWPREIWSKHVDEFEDLFKPENKEAALNCNS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L++  +    +  +          IP S+  + L+    +   I   +    +
Sbjct: 271 EMILNALEHADECLFYLAGLKEQSVFNFCAIPQSMAIATLQLCFRNDA-IFERNVKITK 328


>gi|83953792|ref|ZP_00962513.1| hypothetical protein NAS141_06193 [Sulfitobacter sp. NAS-14.1]
 gi|83841737|gb|EAP80906.1| hypothetical protein NAS141_06193 [Sulfitobacter sp. NAS-14.1]
          Length = 255

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 88/283 (31%), Gaps = 30/283 (10%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           F  D       +   D  R+ A + +P   R  L  LY F+ E+ R     +  +  +MR
Sbjct: 3   FDADLSACAAIIERADPLRFRASMAAPVSARRVLFPLYAFNIEVARAPWVTQETMIAEMR 62

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           LQWW+D+ +      +       +  L   +            +  A  +D Y D+  D 
Sbjct: 63  LQWWRDVCDEIANSGVV-RRHEVATPLALAIS--PEDAVLLDALAAARRWDIYRDAFEDA 119

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLY 196
             F+ Y  + +  L+ +A          A    ++ A     +   +  +P    +G++ 
Sbjct: 120 AHFDAYIDQTAGHLMWVAAR----SLGPAEETTVRDAAYGAGVAAWLHAIPQLVEQGRVP 175

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
                                 D     +   A+     L +AR     I     PA   
Sbjct: 176 LL--------------------DGTDAGVVALAQKARARLRQARANRGKISKAARPAMYS 215

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               + VL  A     ++   +     +        + +  R+
Sbjct: 216 AGAADKVLSAAIAAPGRV--GAGELPPMNDFALSWRA-LSGRW 255


>gi|77164824|ref|YP_343349.1| squalene/phytoene synthase [Nitrosococcus oceani ATCC 19707]
 gi|254433875|ref|ZP_05047383.1| Squalene and phytoene synthases superfamily [Nitrosococcus oceani
           AFC27]
 gi|76883138|gb|ABA57819.1| farnesyl-diphosphate farnesyltransferase [Nitrosococcus oceani ATCC
           19707]
 gi|207090208|gb|EDZ67479.1| Squalene and phytoene synthases superfamily [Nitrosococcus oceani
           AFC27]
          Length = 366

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/310 (10%), Positives = 80/310 (25%), Gaps = 49/310 (15%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-------- 69
           S D  +    L  +     L     PP  +  ++  Y        + D            
Sbjct: 11  SADKNYQDYILPGVSRTFALTIPQLPPPLQEVVANGYLLCRIADTIEDEPTLSIAQKKYF 70

Query: 70  ----------------------PITRDMRLQWWKDIFESSTKGLIAE-SISPFSVELLSI 106
                                 P+  +  L   +++ +++ + L    S +P        
Sbjct: 71  SNLFVTVVAGQTSAESFACSLYPLLSEHTLAAERELIQNAPRILRITYSFNPRQRA---- 126

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILD------S 160
               +       D +      +    + D +  + Y + ++  +  + T +        +
Sbjct: 127 --ALERCVCIMCDGMPRFQNTASLRGLADMEAMDQYCYFVAGVVGEMLTELFCDYSPGIN 184

Query: 161 ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR 220
               A   ++   G    +  ++  +     R   + P  +    G + ++   G     
Sbjct: 185 RNREALRNLMVSFGQGLQMTNILKDIWDDRKRRICWLPRTVFEQAGFNLDNLEPGHYQSA 244

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVS 276
               ++    +   +L  A      I P+           + +    L+       +  S
Sbjct: 245 FGDGLQHLIGVTHAHLRNALTYTLLIPPEEGGIRRFCLWAIGLAMLTLRKLHRR--RNFS 302

Query: 277 HSHTPNQLVR 286
            S       R
Sbjct: 303 ASWQVKISRR 312


>gi|241767204|ref|ZP_04764954.1| Squalene/phytoene synthase [Acidovorax delafieldii 2AN]
 gi|241362163|gb|EER58244.1| Squalene/phytoene synthase [Acidovorax delafieldii 2AN]
          Length = 217

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 57/207 (27%), Gaps = 6/207 (2%)

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----IFDCKQFEHYAFRIS 147
            +   +   + L  ++RQ+ LP     D++ A   D           D  +   Y  R +
Sbjct: 9   PSARWAAVFLPLQQVLRQHALPVPLLEDLLSAFAQDVEKTRDAEGYADRTELLDYCRRSA 68

Query: 148 SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL 207
           + +  L   +       A L+       A  +      L +   R + Y P     A G 
Sbjct: 69  NPVGRLLLHLYGVHGAQA-LQESDAICTALQLINFWQDLSVDIPRARHYLPRADCAAHGA 127

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE-SVLKH 266
            +   L+ + + + +  I   A      +      +  +          V      +L  
Sbjct: 128 SQADLLALRGTPQNARLIAECAHWARATMLSGAPLVHRLPGRAGWELRLVVQGGLRILDK 187

Query: 267 AQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                   +      +       +  +
Sbjct: 188 IDTLQGGSLHTRPRLSGWDWGVMLART 214


>gi|261188846|ref|XP_002620836.1| squalene synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239591978|gb|EEQ74559.1| squalene synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 473

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 88/299 (29%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++EK  S         L+          +   P   + +   Y     L  + D    
Sbjct: 31  HERDEKNSSETEKQCFHFLKFTSRSFSAVIMELHPELLLPVCLFYLVLRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA- 123
           P  T++  L+ + +I E            E      V+  ++V ++      +  +I+  
Sbjct: 91  PLQTKEPLLRDFHNILEKDGWSFNGNRPEEKDRELLVQFHNVVTEFKKIKPAYRTIIKDI 150

Query: 124 ------------HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                          +     +   K+++ Y + ++  +    T +     ++    + +
Sbjct: 151 TKKMGSGMADYCRRAELDTAKVKTVKEYDLYCYYVAGIVGEGLTRLFVEAGFANPALLER 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   Y   + ++P +I      + E     +N +       
Sbjct: 211 TELFISMGLFLQKTNIIRDVKEDYVDNRCFWPREIWSKHVDEFEDLFKPENKEAALNCNS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L++  +    +  +          IP S+  + L+    +   I   +    +
Sbjct: 271 EMILNALEHADECLFYLAGLKEQSVFNFCAIPQSMAIATLQLCFRNDA-IFERNVKITK 328


>gi|255725244|ref|XP_002547551.1| squalene synthetase [Candida tropicalis MYA-3404]
 gi|240135442|gb|EER34996.1| squalene synthetase [Candida tropicalis MYA-3404]
          Length = 446

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 28/309 (9%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           +L F      ++      D +     L+              P  R ++   Y     L 
Sbjct: 20  ILGFRQTLHPQKIDPNDTDLIRCYELLKLTSRSFAAVIKELHPDLRDAIMIFYLVLRALD 79

Query: 62  RVRDTAR-NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQY 116
            + D     P  +   L+ + D  ++           E      VE   I+R Y      
Sbjct: 80  TIEDDMSIKPAVKVPLLRSFDDKLDTEDWTFDGNGPNEKDRAVLVEFDKILRVYHRFKPE 139

Query: 117 FLDMIEAHFFDSYNDSIF-------------DCKQFEHYAFRISSRLI------HLATMI 157
           +  +I+       N                   K ++ Y   ++  +        +    
Sbjct: 140 YQAIIKDITKKMGNGMADYILDENFNVNGVVTVKDYDLYCHYVAGLVGEGLTEFLVLVKF 199

Query: 158 LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQN 217
            D    + +    +  G+      +I         G+ ++P +I G       +F +   
Sbjct: 200 GDQSLSANNFEKAESMGLFLQKTNIIRDYHEDLEDGRSFWPKEIWGKYTDKLPAFHNDPA 259

Query: 218 SD-RISLAIKIFAELGLKYLFKAREEMRYI-LPDVFP-AFIPVSITESVLKHAQNHGFKI 274
            +      I       L ++    E +  +  P  F    IP  +  + L    N+  K+
Sbjct: 260 KEFDGVSCINELVLNALNHVTDCLEYLSLVKDPSSFSFCAIPQVMAVATLAEVYNNP-KV 318

Query: 275 VSHSHTPNQ 283
           +       +
Sbjct: 319 LHGVVKIRK 327


>gi|327243159|gb|AEA41712.1| squalene synthase [Eleutherococcus senticosus]
 gi|327243163|gb|AEA41714.1| squalene synthase [Eleutherococcus senticosus]
 gi|327243167|gb|AEA41716.1| squalene synthase [Eleutherococcus senticosus]
          Length = 415

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 70/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L      P  R ++   Y     L  V D    +   +   L  
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILIA 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +      +               +     S   L +   Y    +     + A       
Sbjct: 97  FHRHIYDNDWHFSCGTKEYKVLMDEFHHVSNAFLELGSGYKDAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  V    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASGLEDLATDSVSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L ++    + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDPAIFRFCAIPQIMAIGTL-ALCYNNIQVFRGVVKLRR 315


>gi|167564873|ref|ZP_02357789.1| squalene/phytoene synthase family protein [Burkholderia
           oklahomensis EO147]
          Length = 349

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 82/302 (27%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
            L+ +    YL   + P   R  +   Y        + DT+  P  + + L         
Sbjct: 13  LLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQVN 72

Query: 78  ------QWWKDIFESSTKGLIAESISPF-----SVELLSIVRQYDLP--NQYFLDMIEAH 124
                    +   E + + ++++  +       ++ +LS +   D          + E  
Sbjct: 73  GAPEPDALARIAGEVAGQQMVSDEKTLLESLGPALAMLSQLSAADRDAVRDVVTTLTEGM 132

Query: 125 FFDSYNDSIFD---------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
            FD                   + + Y + ++  +    T +  +           A   
Sbjct: 133 EFDLLTFPDESSGRIAALREWPELDRYTYLVAGCVGEFWTRMTCAHLPGLLTGHPDAMAE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  +  L    S R    +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGKDLRIGRCYLPQAMLDEYGLRADDLLRPDASLRARPLLHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L++     +    I             P+ I    L    ++           +++
Sbjct: 253 VRKTLEHFRAGIDYTFAIPRRAPRLRLACVWPIVIGLKTLALLASN--DAWLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|300113881|ref|YP_003760456.1| squalene/phytoene synthase [Nitrosococcus watsonii C-113]
 gi|299539818|gb|ADJ28135.1| Squalene/phytoene synthase [Nitrosococcus watsonii C-113]
          Length = 366

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/314 (9%), Positives = 76/314 (24%), Gaps = 37/314 (11%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------- 68
           S D  +    L  +     L     P   +  ++  Y        + D            
Sbjct: 11  STDKNYQDYILPGVSRTFALTIPQLPSPLQEVVANGYLLCRIADTIEDEPTLSTTQKKNF 70

Query: 69  -----NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
                  +      + +              +          I+R     N      +E 
Sbjct: 71  SNDFVTVVAGQSSAEAFAHALYPLLSEHTLAAERELIRNTPRIIRITHSFNSRQRAALER 130

Query: 124 HFFDSYNDSI-----------FDCKQFEHYAFRISSRLIHLATMILD------SERYSAS 166
                 +               D +  + Y + ++  +  + T +        +    A 
Sbjct: 131 CVRIMCDGMPHFQNTASLRGLADMEAMDRYCYFVAGVVGEMLTELFCDYSPGINRNREAL 190

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
             ++   G    +  ++  +     R   + P  I    G + ++   G         ++
Sbjct: 191 RNLMVSFGQGLQMTNILKDIWDDRKRRICWLPRTIFEQAGFNLDNLQPGHYQSTFGDGLQ 250

Query: 227 IFAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHA-QNHGFKIVSHSHTP 281
               +   +L  A      I P+           + +    L+   +   F   S     
Sbjct: 251 HLIGITHAHLRNALTYTLLIPPEEGGIRRFCLWAIGLAMLTLRKLHRRRNF-SASREVKI 309

Query: 282 NQLVRPWYMLSSSI 295
           ++      +L +S+
Sbjct: 310 SRRSVKATILLTSV 323


>gi|237785913|ref|YP_002906618.1| putative phytoene synthase [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758825|gb|ACR18075.1| putative phytoene synthase [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 350

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 71/293 (24%), Gaps = 41/293 (13%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRD 74
            +    R +R       L+  L  P  R  +  LY        V D A       P    
Sbjct: 53  AARLSSRLIRAYSTSFTLSTRLLGPRVRQDIHNLYGIVRVADEVVDGAAGGHGLPPERIR 112

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF--------- 125
             L  ++             S  P     +   R  D+ N +     ++           
Sbjct: 113 DVLNDYEQRVREG--CATGFSTDPIIHAFIGTARSCDIKNSHLAAFFQSMRADIPASYSA 170

Query: 126 -FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS------ASLRVIKYAGIAQF 178
                + +++D +  + Y +  +  +  +   I   +            +  ++ G A  
Sbjct: 171 HQAPQSTTVYDAETRDTYIYGSAEVIGLMCLSIFLRDETPSPADRRTMEQGARHLGAAFQ 230

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
               +                D L    +     L+ +  D              + L  
Sbjct: 231 KINFLRDYAAD---------KDGLNRDYVAHGQPLNDETKDSF-------LTEIYRDLSI 274

Query: 239 AREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWY 289
           A + +  +            ++   +    ++   + + S         +   
Sbjct: 275 AHQAILLLPASSRLGVRAAYALFLKLTHSLEHTPAQKVTSSRIRVGNATKLLT 327


>gi|196228388|ref|ZP_03127255.1| Squalene/phytoene synthase [Chthoniobacter flavus Ellin428]
 gi|196227791|gb|EDY22294.1| Squalene/phytoene synthase [Chthoniobacter flavus Ellin428]
          Length = 345

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 72/301 (23%), Gaps = 54/301 (17%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            L  +    YL+  L P   R  +   Y        + D+   P    +          +
Sbjct: 12  LLASVSRSFYLSIRLLPSKLRAPVGLAYLLARASDTIADSPEVPEATRLH-------HLA 64

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC---------- 136
           S   +I    +    EL   +          L  ++       +    D           
Sbjct: 65  SFARMIRTGKTDGLAELQQDIHTTHAGETMLLCNLDRCLQWLEHVDNKDRSEIVDVLERI 124

Query: 137 ------------------------KQFEHYAFRISSRLIHLATMILDSERY-------SA 165
                                   ++ + Y + ++  +    T +  +          + 
Sbjct: 125 IRGQTLDLERFSVGGVHVVALQSAEELDEYTYLVAGCVGEFWTRVCLNHLPGCSSLGLAD 184

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
             ++ +  G    +  ++         G+ Y P   L A G      L      +     
Sbjct: 185 LRKLGEEYGKGLQLVNILRDFTEDLRNGRCYLPEPELRAAGTSPTPLLDAPV--KAQPVY 242

Query: 226 KIFAELGLKYLFKAREEMRYILPDVF---PAFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
             + E   + L    E +  +          F+P  I    L+     G          +
Sbjct: 243 DRWLERATQQLDAGYEYISTL-RSARLRMACFLPWYIGLRTLRLLAKPGTLTKPGKVKVS 301

Query: 283 Q 283
           +
Sbjct: 302 R 302


>gi|75859951|gb|ABA29019.1| squalene synthase [Panax notoginseng]
          Length = 415

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 72/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQ 78
             F    L  +     L      P  R ++   Y     L  V D    P      + + 
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L +   Y    +     + A       
Sbjct: 97  FHRHIYDKDWHFSCGTKEYKVLMDEFHHVSNAFLELGNGYQEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  +    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSAKAVRCLNDMVTNALVHAEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDPAIFRFCAIPQIMAIGTL-ALCFNNTQVFRGVVKMRR 315


>gi|115523828|ref|YP_780739.1| squalene/phytoene synthase [Rhodopseudomonas palustris BisA53]
 gi|115517775|gb|ABJ05759.1| Squalene/phytoene synthase [Rhodopseudomonas palustris BisA53]
          Length = 301

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 80/271 (29%), Gaps = 12/271 (4%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGL 91
           D +  +A  +  P +R  +   Y F      + D A       +RL    D  ++   G 
Sbjct: 24  DENFPVASWIIHPRHRGLILAYYNFVRTADDIADHAELDDATKLRL---LDELDNDLIGR 80

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
                 P ++ L        +  ++  D+I A   D       D  +  HY    +  + 
Sbjct: 81  GG--GQPEALALREAFAARGMAPRHARDVITAFRMDVNKRRYNDWDELIHYCSYSAMPVG 138

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRE 210
                +      +A+         A  I   +      +    ++Y P D + A G   E
Sbjct: 139 RFM--LDVHGESTATWAASDALCAALQIINHLQDCAKDFRDLDRVYIPADAMAATGARIE 196

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV--SITESVLKHAQ 268
                +    +   +   A+     L  +     ++        I V  +    ++ + +
Sbjct: 197 MLGEPRAPAPLLSCLHQLADRSETLLLDSLALAGHVGDARLACEIGVIQAYARRIVSYLK 256

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                 +      ++L    Y L +     +
Sbjct: 257 LR--DPLCERVHLSKLELTGYGLGALATGIW 285


>gi|167572077|ref|ZP_02364951.1| squalene/phytoene synthase family protein [Burkholderia
           oklahomensis C6786]
          Length = 349

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 83/302 (27%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
            L+ +    YL   + P   R  +   Y        + DT+  P  + + L         
Sbjct: 13  LLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQVN 72

Query: 78  ------QWWKDIFESSTKGLIAESISPF-----SVELLSIVRQYDLP--NQYFLDMIEAH 124
                    +   E + + ++++  +       ++ +LS +   D          + E  
Sbjct: 73  GAPEPDALARIAGEVAGRQMVSDEKTLLESLGPALAMLSQLSAADRDAVRDVVTTLTEGM 132

Query: 125 FFDSYNDSIFD---------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
            FD                   + + Y + ++  +    T +  +           A   
Sbjct: 133 EFDLLTFPDESSGRIAALREWPELDRYTYLVAGCVGEFWTRMTCAHLPGLLTEHPDAMAE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  +  L    S R    +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGKDLRIGRCYLPQAMLDEYGLRADDLLRPDASLRARPLLHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L++     +    I             P+ I    L    ++G          +++
Sbjct: 253 VRKTLEHFRAGIDYTFAIPRRAPRLRLACVWPIVIGLKTLALLASNGA--WLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|300123616|emb|CBK24888.2| unnamed protein product [Blastocystis hominis]
          Length = 228

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 73/212 (34%), Gaps = 7/212 (3%)

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           MRLQW++D   +        +  PF   L  ++  Y     +   +IEA   D  +++I 
Sbjct: 1   MRLQWFRDQITAYYDKQAVGAS-PFLRCLFQMIHDYGWSYTFLDRIIEAREMDLNDEAIN 59

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
                  Y  RI   + +L          +      +       I  L+   P H    +
Sbjct: 60  TLDDLRDYGERIYGSIGYLLMQSFGITDNNLVEGWRRA-SHVMSISTLLRGSPYHLQHDK 118

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY----ILPDV 250
            YFPLDI    GL        + S+ +   +K  A+  L    +AR   +          
Sbjct: 119 CYFPLDICKKNGLAPIDACDVK-SEAVKKVVKEIADSALSTYEEARALWKAGCNGENKQY 177

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
              F+  +     L+  +  G+ ++  S T  
Sbjct: 178 KTMFLLSTPGVFYLEKLRKKGYNLLDASLTSP 209


>gi|296537117|ref|ZP_06899074.1| possible squalene synthase HpnD [Roseomonas cervicalis ATCC 49957]
 gi|296262556|gb|EFH09224.1| possible squalene synthase HpnD [Roseomonas cervicalis ATCC 49957]
          Length = 191

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 61/189 (32%), Gaps = 12/189 (6%)

Query: 45  LYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELL 104
             R +L  +Y F   +  + D A     +   L  W+   E            P S EL 
Sbjct: 14  PARRALYAVYAFCRAVDDIADGAMPEADKRAALAEWRRKLEL--------PDCPLSRELA 65

Query: 105 SIVRQYDLPNQYFLDMIEAHFFDSYN-DSIFDCKQFEHYAFRISSRLIHLATMILDSERY 163
               ++ LP      MI+    D+     I D    + Y  +++  +  LA  I  +   
Sbjct: 66  WARAEFTLPLAECRAMIDGMEADAGPCRRIADAAALDLYCRQVAGSVGALAVRIFGAAEA 125

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
                     G A  +  ++  L     R ++Y P D L A G+   S  +     R+  
Sbjct: 126 E---PFGLALGRALQLVNVLRDLDEDAARDRIYVPEDALLAAGIGEGSARARIADPRLEG 182

Query: 224 AIKIFAELG 232
                A   
Sbjct: 183 VALDLARRA 191


>gi|209517900|ref|ZP_03266733.1| Squalene/phytoene synthase [Burkholderia sp. H160]
 gi|209501616|gb|EEA01639.1| Squalene/phytoene synthase [Burkholderia sp. H160]
          Length = 348

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 67/270 (24%), Gaps = 39/270 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKD--- 82
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +D   
Sbjct: 13  LLKGVSRSFYLTLRVLPTGMRDPVGLAYLLARAADTIADTSLIAPDQRLELLLALRDQVN 72

Query: 83  ----------IFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFD 127
                        +   G  A+S     +      L  + +  +        ++      
Sbjct: 73  GVAVDSAPFQRIAAEVAGQQAQSDERLLLESLSPALDVLAQLSESDRHAVRAIVTTLTEG 132

Query: 128 SYN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSERYSA-------SL 167
                 +  D             + + Y + ++  +    T +  +              
Sbjct: 133 MEFDLRTFPDERSGQLAALREYDELDRYTYLVAGCVGEFWTTMTYAHMPGTLKEQPGTMT 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P  +L   GL     L   NS R    +  
Sbjct: 193 HRGVRFGKALQMTNVLRDCGKDLRIGRCYLPQSMLERHGLSARDLLQPANSMRARPLLIE 252

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPV 257
                L++   A +    I        +  
Sbjct: 253 LLRKTLEHFRAALDYTLAIPASAVRLRLAC 282


>gi|256825216|ref|YP_003149176.1| phytoene/squalene synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688609|gb|ACV06411.1| phytoene/squalene synthetase [Kytococcus sedentarius DSM 20547]
          Length = 326

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 67/295 (22%), Gaps = 33/295 (11%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-----TARNPITR 73
                  + +        LA  L     R  +  LY        + D         P   
Sbjct: 37  ASRRASRQVIAHYSTSFGLATRLLGEPVRHRVRSLYALVRVADEIVDGAAAGAGLGPDAI 96

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L   +   E +       S  P         R   +  +       +   D      
Sbjct: 97  GALLDDHEARTEEALA--TGYSTDPVVHAFADAARACGITPELTRPFYASMRADLQVAEH 154

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI-------KYAGIAQFIGQLICQL 186
            D + FE Y +  +  +  +      ++     +          +  G A      +  L
Sbjct: 155 -DERTFEEYVYGSAEMVGLMCLRAFATDDAPTPVAPSPDLVEGARRLGAAFQKVNFLRDL 213

Query: 187 PIHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 RG+ YFP       GLD  S  +                     L  A   +  
Sbjct: 214 AEDTDGRGRAYFP-------GLDPASLSTVHRDA--------LVAGIRADLAVADAVIPR 258

Query: 246 ILPDVFPAFIPV-SITESVLKHAQNHGFKIVS-HSHTPNQLVRPWYMLSSSIKKR 298
           +      A      +  ++           +           +   +  + +++R
Sbjct: 259 LPDSSRTAVRVCHDLYAALTDRLARTPAHALRTRRVRVPDARKAAIVGRAVVRER 313


>gi|162147951|ref|YP_001602412.1| hypothetical protein GDI_2167 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786528|emb|CAP56110.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 292

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 85/254 (33%), Gaps = 20/254 (7%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-----PITRDMRLQWW 80
              R  D DR+   L  P   R     L  F+ E +R      +     P+   +RLQWW
Sbjct: 19  EIARRSDPDRFFCTLFLPASVREDAFTLIAFNHESVRALSGMHSRSVAGPMAGLIRLQWW 78

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
           ++I E ++           +  L +++R   +     L +++A   +             
Sbjct: 79  REIVEGASHP------HEVADPLRALIRAGRVRRDTLLGILDAREAELEG-LPDWAAWRA 131

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
                       +A +          LR +++ G A  +G L+  +      G+   P  
Sbjct: 132 AMRAGAGGVQAAIAQVAGTGTTDPDLLRAVEFLGAAYGVGGLLRHMGAVLAGGRCPLPEP 191

Query: 201 ILGAVGLDRESFLSGQNSDR--ISLAIKIFAELGLKYLFKAREEMR------YILPDVFP 252
            L   GL  ES   G       ++       + G ++L +A  ++        +   V  
Sbjct: 192 ALQEFGLSGESIRDGAGIQGSDLTPLRARLRDEGREFLAQAGMQVAAGAVRVRLPRAVRA 251

Query: 253 AFIPVSITESVLKH 266
           A +P ++    L  
Sbjct: 252 AGLPGALARRDLGR 265


>gi|317453453|emb|CBY78071.1| truncated phytoene synthase/carotene cyclase [Neurospora crassa]
          Length = 507

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 67/236 (28%), Gaps = 38/236 (16%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 269 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI----------------SPFSVELLSIV 107
            D A++               +   K   A                    P + + L ++
Sbjct: 327 VDDAKSRREVLSWTAKLNHFLDLHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALHLL 386

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSI------------FDCKQFEHYAFRISSRLIHLAT 155
             + LP +   D+I+    DS                  D K  E+YA  ++  +  L  
Sbjct: 387 PTHILPPKPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCI 446

Query: 156 MILDSERYSASLRVI--------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
            ++                       GIA     +   + +    G++Y P   L 
Sbjct: 447 ALIIYHCLPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLK 502


>gi|295429140|ref|ZP_06821762.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|295126899|gb|EFG56543.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           EMRSA16]
          Length = 169

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 49/160 (30%), Gaps = 2/160 (1%)

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                 +   Y + ++  +  + T IL       +  V +  G +  +  ++  +   + 
Sbjct: 1   MFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFE 60

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
             ++YF    L    +D         ++      + +A +  K      ++++    +  
Sbjct: 61  NERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQ 120

Query: 252 PAF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
           P   +   I   +L   +   +  +       +  +    
Sbjct: 121 PIIELAARIYIEILDEVRQANY-TLHERVFVEKRKKAKLF 159


>gi|269794597|ref|YP_003314052.1| phytoene/squalene synthetase [Sanguibacter keddieii DSM 10542]
 gi|269096782|gb|ACZ21218.1| phytoene/squalene synthetase [Sanguibacter keddieii DSM 10542]
          Length = 297

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/275 (9%), Positives = 63/275 (22%), Gaps = 24/275 (8%)

Query: 31  IDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST-K 89
                  AC L     R  +  +Y        + D            +   D+   +   
Sbjct: 35  YSTSFGWACRLLHRPVRGHVRNIYALVRLADEIVDGPLAAADPTRSARLLDDLERETYDA 94

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
                S +          R++DL + +      +   D            + Y +  +  
Sbjct: 95  VASGYSTNLVVHAFAITARRFDLDHDHVRAFFASMRTDLTRSVH-TADSLDEYIYGSAEV 153

Query: 150 LIHLATMIL----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGA 204
           +  +   +          +      +  G A      +  L   +   G+ YFP   L A
Sbjct: 154 VGLMCLDVFLGAAGRTDVADLTPGARSLGAAFQKINFLRDLGADHDDLGRAYFPGVDLAA 213

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESV 263
                                          L +A   +  +  +   A      +   +
Sbjct: 214 FTDADRDV---------------LVADVRADLDRAATVIPRLPANSRVAVAAAHGLFAEL 258

Query: 264 LKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKK 297
            +         +++         +   + ++   +
Sbjct: 259 TRRVAAVPAAELLTTRVRVPAPAKARIVAAALRSR 293


>gi|2113820|emb|CAA60247.1| unknown [Bradyrhizobium japonicum]
          Length = 294

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 75/261 (28%), Gaps = 12/261 (4%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
           D D +  +A  +  P +R  +   Y F      + D     +  D +L +  D+ E+   
Sbjct: 13  DRDENFPVASWIIHPRHRALILAYYNFVRTADDIAD--HATLPGDQKLAYL-DLLEAELL 69

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
           G            L   + +  +  ++ LD++ A   D       +  +  HY    +  
Sbjct: 70  GKGDTQAEAVV--LRRALAEAGMAPRHALDVLIAFRMDVTKLRYENWDEVIHYCRYSAMP 127

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLD 208
           +      +      + +         A  I   +      +    ++Y P D L A G  
Sbjct: 128 VGRFMLDVHGESTSTWAA--SDPLCAALQINNHLQDCGKDFRELNRVYLPRDALAASGAS 185

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQ 268
            E     Q+   +   ++  A      L + R     I  D         I ++      
Sbjct: 186 VEQLGLAQSPPAMLACLQSLAVRNEALLDEGRSLTAEI-RDFRLGIDVAVI-QAYADRIV 243

Query: 269 NHG--FKIVSHSHTPNQLVRP 287
                   +      N+    
Sbjct: 244 RLLKVRDPLRERVHLNKFELL 264


>gi|255325854|ref|ZP_05366946.1| phytoene synthase [Corynebacterium tuberculostearicum SK141]
 gi|255297066|gb|EET76391.1| phytoene synthase [Corynebacterium tuberculostearicum SK141]
          Length = 291

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/288 (10%), Positives = 62/288 (21%), Gaps = 23/288 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
              S    + +        LA  L     R  +  LY        + D A      D   
Sbjct: 7   QAASRAAAQVMGQYSTSFSLATRLLRGRVRADIRHLYAVVRIADELVDGAAAQAHTDPAA 66

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCK 137
                               P         R+     ++ +    +   D          
Sbjct: 67  ALSAYEQTILAAPQQRLHTDPIVHAYAITARRCGFHREHLVAFFSSMRADLTQREY-SPS 125

Query: 138 QFEHYAFRISSRLIHLATMIL------DSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
           + + Y +  +  +  L   I            +A  R  +  G A      +  L     
Sbjct: 126 ELQDYIYGSAEAIGLLCLQIFLAEEDVSPADRAAMERGARALGSAFQKINFLRDLAEDSS 185

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
                +            +   SG+  +    A         + L  A   +  +     
Sbjct: 186 TLGRTY-----------FQQAPSGRIDEATKSA---LIAEIRRELATAALTIDLLPASAR 231

Query: 252 PAFIPVS--ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                 +    E   + A      + +   +     + W    +  ++
Sbjct: 232 VGVSAAADIFAELTNRLAATPATALAATRVSVPNHTKAWLAARAVRRR 279


>gi|154271921|ref|XP_001536813.1| squalene synthetase [Ajellomyces capsulatus NAm1]
 gi|150408800|gb|EDN04256.1| squalene synthetase [Ajellomyces capsulatus NAm1]
          Length = 493

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 84/299 (28%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++EK  S         L           +   P   + +   Y     L  + D    
Sbjct: 31  HERDEKNVSETQKKCFEFLELTSRSFSAVIMELHPELLLPVCLFYLALRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P  T++  L+ + +I E            E      V+  ++V ++ L    +  +I+  
Sbjct: 91  PLQTKEPLLRGFHNILEEDGWSFNGNRPEEKDRELLVQFHNVVTEFKLIKPAYRTIIKDT 150

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                                +   K+++ Y + ++  +    T +     ++    + +
Sbjct: 151 TKKMGSGMADYCRKAELDTAKVKTVKEYDLYCYYVAGIVGEGLTRLFVEAGFANPALLER 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   Y   + ++P +I      D E     +N +       
Sbjct: 211 TELFISMGLFLQKTNIIRDVEEDYVDNRCFWPQEIWSKHVDDFEDLFKRENREAALNCNS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L +  +    +  +          IP S+  + L         I   +    +
Sbjct: 271 EMILNALGHADECLFYLAGLREQSVFNFCAIPQSMAIATL-ELCFRNEAIFERNIKITK 328


>gi|300780507|ref|ZP_07090363.1| phytoene synthase [Corynebacterium genitalium ATCC 33030]
 gi|300534617|gb|EFK55676.1| phytoene synthase [Corynebacterium genitalium ATCC 33030]
          Length = 282

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 20/287 (6%), Positives = 60/287 (20%), Gaps = 31/287 (10%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP--ITRDMRLQW 79
               + +        LA  +     +  +  LY        + D          +  L  
Sbjct: 15  RAAAQVIGQYSTSFSLATQVLDADTKRDIRNLYAVVRIADEIVDGTAAEANECPETLLDL 74

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           +++        +      P      +  R+  + + +      +   D         +  
Sbjct: 75  YEEQV--LHAPMHRFHTDPVLHAWANTHRRCGINDDHVRAFFASMRRDITQSDY-SEEDL 131

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVI------KYAGIAQFIGQLICQLPIHYHRG 193
             Y +  +  +  +   +                   +  G A      +  L       
Sbjct: 132 GDYIYGSAEVIGLMCLDVFLHGHDPTDDDRRTMEEGARALGSAFQKVNFLRDLGEDRDGL 191

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFP 252
              +    L                       +       + L +AR  +  + P     
Sbjct: 192 GRAYLGTELDD------------------AVKRTLTSGINRELDRARTAIPLLPPAAARG 233

Query: 253 AFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSSSIKKR 298
                ++   + +         + +   +     +      +  K R
Sbjct: 234 VAAAEALFRDLNERIAATPAHEVAATRISVPNHRKLLLTARAIRKVR 280


>gi|50543526|ref|XP_499929.1| YALI0A10076p [Yarrowia lipolytica]
 gi|51701459|sp|Q9Y753|FDFT_YARLI RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|4545132|gb|AAD22408.1|AF092497_1 squalene synthase [Yarrowia lipolytica]
 gi|49645794|emb|CAG83856.1| YALI0A10076p [Yarrowia lipolytica]
          Length = 445

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/310 (9%), Positives = 80/310 (25%), Gaps = 26/310 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
             ++    S +       L               P  R ++   Y     L  + D    
Sbjct: 28  HPRDLSKESTELRRCYELLDVCSRSFAAVIRELHPEVRDAVMLFYLILRALDTIEDDMTL 87

Query: 69  NPITRDMRLQWWKDIF----ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +   +   L+ +           T     E       E   ++ +++     + ++I   
Sbjct: 88  SRDIKIPILRDFTKCMKTPGWKFTDSDPNERDRVVLQEFPVVMTEFNKLKPKYQEVIYDI 147

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMI-----LDSERYSAS 166
                             N+ +     ++ Y   ++  +    T I       ++    +
Sbjct: 148 TDRMGNGMADYVIDDDFNNNGVDTIAAYDLYCHHVAGIVGEGLTRITILAGFGTDVLHEN 207

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
            R+ +  G+      +I          + ++P +I      +   F   + S +      
Sbjct: 208 PRLQESMGLFLQKVNIIRDYREDIDVNRAFWPREIWHKYAEEMRDFKDPKYSKKALHCTS 267

Query: 227 IFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
                 L +     + +  +          IP  +  + L     +   +   +    + 
Sbjct: 268 DLVANALGHATDCLDYLDNVTDPSTFTFCAIPQVMAIATLDLVYRNP-DVFQKNVKLRKG 326

Query: 285 VRPWYMLSSS 294
                +L +S
Sbjct: 327 TTVSLILEAS 336


>gi|46111687|ref|XP_382901.1| hypothetical protein FG02725.1 [Gibberella zeae PH-1]
          Length = 466

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 99/323 (30%), Gaps = 60/323 (18%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           + T   +        + L  L   DYD +L     P   + + + L   + EL+R+ +  
Sbjct: 21  RRTYITDADVQSARRYCLTQL--HDYDAHLIRRFVPSPVQDTYAVLRTLNLELVRLPELV 78

Query: 68  RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLP---------NQYFL 118
            NP     R+++W++  +++  G       P  + L   ++  +             +  
Sbjct: 79  SNPTIGAFRMKFWQESIDNTFAGRP--PREPICILLHKCLQDLEARDGSSAKKSIKFWIS 136

Query: 119 DMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQF 178
            +I+       N         E YA    S L++ AT+     +      +  + G A  
Sbjct: 137 RLIKTREKHMSNRPFATLSSLEEYAENTYSTLMY-ATLASLPLKSMHVDHLASHIGKACG 195

Query: 179 IGQLICQLPIHY----------------HRGQLYFPLDIL-GAVGLDRESFLSGQNSDRI 221
           I  ++  +P+                      +  PLD +  A   + E F  G N+  +
Sbjct: 196 ITAILRGIPLLAAPPPPVNTPSGQAPPVREPAILLPLDAMAEAEVKEEEVFRQGPNAPGL 255

Query: 222 SLAIKIFAELGLKYLFKAREEMRYIL-----------------------------PDVFP 252
             A+   A     +L  ARE ++ +                                 F 
Sbjct: 256 QDAVFQVATRANDHLITAREMLKRLKAGEDPGHEFEHQGEGEHFYGEGSDTLNEIRQGFG 315

Query: 253 AFIPVSITESVLKHAQNHGFKIV 275
             +    +   L+  +   F   
Sbjct: 316 VLLEAIPSAQYLQRLEQADFNPF 338


>gi|196008639|ref|XP_002114185.1| hypothetical protein TRIADDRAFT_27912 [Trichoplax adhaerens]
 gi|190583204|gb|EDV23275.1| hypothetical protein TRIADDRAFT_27912 [Trichoplax adhaerens]
          Length = 408

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/295 (9%), Positives = 67/295 (22%), Gaps = 19/295 (6%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S       + L                  R ++   Y     L  + D    P+     
Sbjct: 35  LSPTLKRCYQFLVMTSRSFASVIQALDGELRDAICIFYLVLRALDTLEDDMTIPVEEKTA 94

Query: 77  LQWWKDIFESSTKGLIAESIS---------PFSVELLSIVRQYDLP--NQYFLDMIEAHF 125
           L         + +     S           P        + +       +    M +   
Sbjct: 95  LMKELHENLYNPEWKYRRSQEVDKIVLEEFPVISAEFRNLDKSYRDVIQEITKRMADGMC 154

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-----AGIAQFIG 180
                  +   + +  Y   ++  +    + I  + +    +           G+     
Sbjct: 155 KYLDCADVNSFEDWNEYCHYVAGLVGIGLSRIFSASKLEDEIVGEDEPLSNSMGLFLQKT 214

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            +I         G+ ++P +         E F    N D     +       L ++  A 
Sbjct: 215 NIIRDYLADIQEGRKFWPKEAWSKFAKRLEDFQDASNRDEAVRCLNFLITNALHHVPDAI 274

Query: 241 EEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           + +  +          IP  +    L     +   + +      +    + M  +
Sbjct: 275 KYLSRLRNQSVFNFCAIPQVMAIGTL-AVCYNNPDVFTTVVKLRKGQAVYMMKRA 328


>gi|260575278|ref|ZP_05843278.1| conserved hypothetical protein [Rhodobacter sp. SW2]
 gi|259022538|gb|EEW25834.1| conserved hypothetical protein [Rhodobacter sp. SW2]
          Length = 255

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 63/280 (22%), Positives = 106/280 (37%), Gaps = 26/280 (9%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D DR+ AC+ +PP  R  L  LY  + EL R    +  P+  +MRLQW
Sbjct: 2   SLQACAERVERGDPDRFAACMAAPPAARARLWPLYALNLELARAPWASTEPMIAEMRLQW 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W D  +   +    +        L  +V+  DLP      MI+A   D Y     D    
Sbjct: 62  WADAIDDLGR--GTQRPHEVIAPLAEVVQAADLPA--ISRMIDARRHDIYAAPFADAAAL 117

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
           + Y     + L+ LA          A+  V++ AG A  +   +  +P    RG++  P 
Sbjct: 118 DGYLQDTGAALMWLAARA--LGAPEATEAVVRDAGWAMALASYLRAVPDLQARGRVPLP- 174

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D    A+   A  GL  L +AR   R +     PA +    
Sbjct: 175 -------------------DARPQAVADLARQGLARLARARGARRLVPVSAHPALLAGWQ 215

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           T+++L+ A     ++ ++    ++  R   +L  ++  R+
Sbjct: 216 TQALLQLAVAQPERVAANDLRLSEFSRRGGLLWQALTGRW 255


>gi|117662734|gb|ABK55717.1| phytoene synthase [Cucumis sativus]
          Length = 141

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 47/140 (33%), Gaps = 5/140 (3%)

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFI 179
             D       +  +   Y + ++  +  ++  ++           +        GIA  +
Sbjct: 1   RMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQL 60

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
             ++  +     RG++Y P D L   GL  E   +G+ +D+    +K   +    +  +A
Sbjct: 61  TNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKSQIKRARMFFDEA 120

Query: 240 REEMRYILPDVFPAFIPVSI 259
            + +  +            +
Sbjct: 121 EKGVLELNKASRWPVWASLL 140


>gi|107026455|ref|YP_623966.1| squalene/phytoene synthase [Burkholderia cenocepacia AU 1054]
 gi|116692357|ref|YP_837890.1| squalene/phytoene synthase [Burkholderia cenocepacia HI2424]
 gi|105895829|gb|ABF78993.1| farnesyl-diphosphate farnesyltransferase [Burkholderia cenocepacia
           AU 1054]
 gi|116650357|gb|ABK10997.1| farnesyl-diphosphate farnesyltransferase [Burkholderia cenocepacia
           HI2424]
          Length = 355

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 75/306 (24%), Gaps = 50/306 (16%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-------- 77
             L+++    YL   + P   R  +   Y        + DTA     R   L        
Sbjct: 13  ELLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTDLRDDI 72

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        E  T+             +  ++     Q +        ++      
Sbjct: 73  ERLGDGAALSRSLEDVTRMQTDSHEHLLLGSMEPMLALLRAQPEADRASIRKVVATLTAG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+      + Y + ++  +    T +  +   +A    +    
Sbjct: 133 MEFDLRTFPHEQSGQVASLPTRDVLDRYTYLVAGCVGEFWTDMTGAHTRAARGWDLSDMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+LGA GL     +  + S+R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLGAHGLVVADLMQPEASERARGVLVD 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQ--------NHGFKIV 275
              + L     A      I             P+ I    L+               K+ 
Sbjct: 253 LLRVALDQYRDAYLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGHAAWLDPAKPAKVP 312

Query: 276 SHSHTP 281
                 
Sbjct: 313 RKRVYR 318


>gi|209522586|ref|ZP_03271157.1| putative phytoene synthase [Burkholderia sp. H160]
 gi|209496976|gb|EDZ97260.1| putative phytoene synthase [Burkholderia sp. H160]
          Length = 236

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 59/207 (28%), Gaps = 6/207 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +    +  L+ L+    E         +P     +L WW+
Sbjct: 33  DYCQQKAAPPGSSTYYALRQARAASQPLLTALFALRREFEETVKETSDPAVGRTKLAWWQ 92

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L + +           D++     D       D      
Sbjct: 93  KELAALAA---GSPSHPVSEALAAYLPDPQAEYPALQDLLAGFEMDLDQARYLDYPNLRR 149

Query: 142 YAFRISSRLIHLATMILDSERYSASLR---VIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
           Y   +      L +    +   + + +        G A  + Q + +       G++Y P
Sbjct: 150 YVRGVGGNFASLVSRAAATGSANDAAQASEWAAPLGEALMLAQFVAETGNDARHGRIYVP 209

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAI 225
           +D +    +     ++ + +D  +  +
Sbjct: 210 IDEMQRYNVTAADLINRKYTDAFTELM 236


>gi|167838656|ref|ZP_02465515.1| squalene/phytoene synthase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 349

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 70/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
            L+ +    YL   + P   R  +   Y        + DT+  P  + + L         
Sbjct: 13  LLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQVN 72

Query: 78  -----QWWKDIFESSTKGLIAESISPFSVELLSIVR--------QYDLPNQYFLDMIEAH 124
                     I                   L   +                    + E  
Sbjct: 73  GTPDPDALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLGAADRGAVRGVVTTLTEGM 132

Query: 125 FFDSYNDSIFD---------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
            FD                   + + Y + ++  +    T +  +        R      
Sbjct: 133 EFDLRTFPDESSGRLAALREWPELDRYTYLVAGCVGEFWTTMTCAHLPGLLTEREDTMAE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  +  L    S R    +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGKDLRIGRCYLPQAMLDEYGLRADDLLRPDASLRARPLMHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 253 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|297201555|ref|ZP_06918952.1| predicted protein [Streptomyces sviceus ATCC 29083]
 gi|297147917|gb|EDY61011.2| predicted protein [Streptomyces sviceus ATCC 29083]
          Length = 634

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 81/291 (27%), Gaps = 8/291 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPI 71
           ++       L   R +R  D   Y    L PPL R +   ++   +    + D       
Sbjct: 47  DDPALRAAYLHCRRTVRRDDPVEYSIMQLMPPLLRPACWAMWAAFSAADDLADAPAGTTA 106

Query: 72  TRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
           TR  +L+ W    E   +     S  P    L+  + ++ L              D+   
Sbjct: 107 TRTAQLKAWTTALED--ELTAGHSDDPVRRALIDTMHRWRLDLADLRLSFATLDGDTRGR 164

Query: 132 SIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQFIGQLICQL 186
            +   +Q+  +    +          LA   +    +       +      ++   +  L
Sbjct: 165 HLHTWEQWSVWVGDSNLSWATQSMTLLARAGIPVPVWLRRKDSYQRYLDGLYLTDTLTDL 224

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                RG+L  P  +L       +   +   S      I        ++L +        
Sbjct: 225 AQDLARGELNLPTQVLDQFPDAADHLTARHWSPAAGALIAHLTGQARRWLDQPGLTSTLH 284

Query: 247 LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                       +  + L   Q  G  ++S    P   VR   +  +  + 
Sbjct: 285 PGPAELLSTATRLFHARLDAVQAAGPALLSRPAVPAPFVRWRILARARTRG 335


>gi|144897582|emb|CAM74446.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 148

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 3/125 (2%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
             Y    L P   R ++  LY F   +  + D   +  T+  +L   +    +       
Sbjct: 7   SFYWPMRLLPKAKRQAMFALYGFCRAVDDISDGDFDTDTKRAKLTTLRAALTTW--QQTG 64

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND-SIFDCKQFEHYAFRISSRLIH 152
            ++ P   +L   V+++ LP      +++    D  +  +     +   Y  +++  +  
Sbjct: 65  IALHPAIADLAPFVQRFTLPVAELELLLDGMETDVNSPLTAPTMAELSQYCRQVAGTVGV 124

Query: 153 LATMI 157
           LA  I
Sbjct: 125 LAIHI 129


>gi|256831588|ref|YP_003160315.1| Squalene/phytoene synthase [Jonesia denitrificans DSM 20603]
 gi|256685119|gb|ACV08012.1| Squalene/phytoene synthase [Jonesia denitrificans DSM 20603]
          Length = 312

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/303 (8%), Positives = 69/303 (22%), Gaps = 34/303 (11%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
              +   +  ++D+      +R       +A  +     R  +  +Y        + D +
Sbjct: 6   TTPQALYQRAAQDAAH--TVIRQYSTSFGVATAMLTEPVRTHVRNIYALVRVADEIVDGS 63

Query: 68  RNPITRD---MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
            +P         L   +             S +              + +        + 
Sbjct: 64  FDPAPIPHLTAALDALEAEVAQ--AMDRGFSTNLIVHAFAHTAVTCGITDAEIAPFFASM 121

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI----------KYAG 174
             D   D  +  ++   Y +  +  +  +           A  +            +  G
Sbjct: 122 RRDL-GDPYYTAEELSTYIYGSAEVIGMMCLRAFAQAPDVAPTQRSTLVADNIDAARALG 180

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
            A      +  L         Y+    + A GL                           
Sbjct: 181 AAFQKINFLRDLAADQGELGRYY-FPDVAAKGLTE-------------PVKNKILADIEH 226

Query: 235 YLFKAREEMRYILPDVFPAF-IPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLS 292
            L  AR+ +  +      A      +  S+ +  +      + +         +   +  
Sbjct: 227 DLDVARQGIARLPGSSRGAVKAAYLLFTSLTRKLRRASCDELRTRRLRLTTPHKAVVLAR 286

Query: 293 SSI 295
           S++
Sbjct: 287 SAL 289


>gi|168046876|ref|XP_001775898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672730|gb|EDQ59263.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 391

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 78/300 (26%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSR-DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           ++K      R ++ I    +  F  R L  +     +      P  R ++   Y     L
Sbjct: 17  LIKLKIAAHRAQKAIPKDPNLAFCYRMLTRVSRSFSIVIQQLSPELRDAVCVFYLVLRGL 76

Query: 61  MRVRDTARNP-ITRDMRLQWWKDIFESSTKGLIAESISP---------FSVELLSIVRQY 110
             V D    P   +   L+ +       +                    S   L++   Y
Sbjct: 77  DTVEDDMAIPIDIKVPILKAFHKHIYDPSWKFSCGEKDYKELMNKFELVSNAFLNLEEGY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI 170
                   + +           +     ++ Y   ++  +    T +  +    A     
Sbjct: 137 QKVIAEMTERMGNGMAKFIESEVSTVDDYDEYCHYVAGIVGLGLTRLFHASGLEAFKPDD 196

Query: 171 --KYAGIAQFIGQLICQLPIHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
                G+      +I       +     ++++P ++ G      E F    NS      +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPAPRMFWPHEVWGKYATKLEDFKHEDNSQNALRCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPD--VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +     + M  I  +  +    IP  +  + L     +   +        +
Sbjct: 257 NALITNALAHATDCLKYMEDINQEDNLRFCAIPQIMAIATLAE-CYNNINVFRGVVKIRR 315


>gi|302036598|ref|YP_003796920.1| squalene synthase [Candidatus Nitrospira defluvii]
 gi|300604662|emb|CBK40994.1| Squalene synthase [Candidatus Nitrospira defluvii]
          Length = 319

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 81/288 (28%), Gaps = 44/288 (15%)

Query: 41  LSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWK-------------DIFES 86
           + P   R  +   Y F      + D    +   R   L  ++                ++
Sbjct: 1   MLPATVRDQMGLAYLFARAADTIADTDLIDREQRLRYLTQFRMQFSSSAGARSDLHAIQA 60

Query: 87  STKGLIAESISPFSVE-------LLSIVRQYDLPNQYFLDMI--EAHFFDSYN------- 130
           +     A+S     ++       L       D     +L  +  +    D  +       
Sbjct: 61  ALIPHQADSAERVLLQRLEDCLTLYDQFDPADQERIRWLMGVLPDGMAMDLSHFQGDSAQ 120

Query: 131 --DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-------YAGIAQFIGQ 181
              +     + + Y + ++  +    T ++ +   S S   +          G    +  
Sbjct: 121 NLTAFQTLDELDQYTYYVAGCVGEFWTRMVCAHCPSMSDWDVTKMSAIGVRFGKGLQLTN 180

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           ++  L    HRG+ Y P  +L   GL     L+ ++  +    +    ++ +++L +   
Sbjct: 181 IVKDLARDLHRGRCYVPEPLLREAGLTPVDLLNRESLPKFRPVLMRLIKMAIEHLDQGWM 240

Query: 242 EMRYIL----PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
               +             P+ +    LK        ++  S       
Sbjct: 241 YTMALPRLEIRQRLACMWPILLAGETLKRVAAAP-DLLDPSVNVKAPR 287


>gi|1706774|sp|P53800|FDFT_NICBE RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|1184109|gb|AAA87048.1| squalene synthetase [Nicotiana benthamiana]
          Length = 411

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 75/293 (25%), Gaps = 20/293 (6%)

Query: 10  TRKEEKIF--SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            R  EK    S +  F    L  +     L     P   R ++   Y     L  V D  
Sbjct: 24  ARHAEKQIPPSPNWGFCYSMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDT 83

Query: 68  RNPITRDMRL----------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYF 117
             P    + +          + W     +    ++ +     S   L + + Y    +  
Sbjct: 84  SIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELRKHYQQAIEDI 143

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A         +     ++ Y   ++  +    + +  +      AS  +    G+
Sbjct: 144 TMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGLSKLFHASEKEDLASDSLSNSMGL 203

Query: 176 AQFIGQLICQLPIHYHRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +I       +      +++P +I        E      NS +    +       
Sbjct: 204 FLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKLEELKYEDNSAKAVQCLNDMVTNA 263

Query: 233 LKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L ++      M  +          IP  +    L        ++        +
Sbjct: 264 LPHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTL-AMCYDNIEVFRGVVKMRR 315


>gi|159895663|gb|ABX10442.1| squalene synthase 2 [Gossypium hirsutum]
          Length = 412

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/280 (9%), Positives = 69/280 (24%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L         + ++   Y     L  V D        +   L+ 
Sbjct: 37  WAFCFSMLHKVSRSFALVIQQLDTELKNAVCIFYLVLRALDTVEDDTSVATDIKVPILEE 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +                      +     S   L + + Y    +     + A       
Sbjct: 97  FYRHIYDRDWHFSCGTKNYKVLMDEFHHVSTAFLELEKGYQEAIEDITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 KEVETVGDYDEYCHYVAGLVGLGLSQLFHACGTEDLAPDTLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I G      E     +NS +    +       L ++    + M  
Sbjct: 217 DINEIPKSRMFWPRQIWGKYVNKLEDLKYEENSVKAVQCLNDMVTNALIHVDDCLKYMSA 276

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LPDPAIFRFCAIPQVMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|268316826|ref|YP_003290545.1| Squalene/phytoene synthase [Rhodothermus marinus DSM 4252]
 gi|262334360|gb|ACY48157.1| Squalene/phytoene synthase [Rhodothermus marinus DSM 4252]
          Length = 270

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 74/258 (28%), Gaps = 8/258 (3%)

Query: 43  PPLYRISLSFLYYFHTELMR--VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFS 100
           P   R +   L+++H  L R  V  T    +T  +  +  +   +   + +  E      
Sbjct: 13  PEALRPAARALWHWHLALRRPNVPATEPEAVTAFLEAEAVRLQQDEPIRVVPEE----VW 68

Query: 101 VELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDS 160
                 V Q++LP +     + A           D    E +    +     L   +   
Sbjct: 69  QAAREAVLQHELPVELLAVQVRAARVWVAPVRFPDAAALEAFLQDFAGAHGRLLARLAGV 128

Query: 161 ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR 220
                  +V   A       +L   LP      +L+ PL+ L   G+  E    G     
Sbjct: 129 GTRFNDPQVNALAAGFFLTDRLTR-LPRDLAADRLFIPLEDLERAGVSVELLQRGAGHPA 187

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPD-VFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
           +   +        + L + R  M  +             +   VL+  +   + +     
Sbjct: 188 VRRLLWKQVVRAQEALARGRTLMHELPRRYARALRREWLLALEVLRTIERRDYDLWRGPI 247

Query: 280 TPNQLVRPWYMLSSSIKK 297
             ++  R      +   +
Sbjct: 248 RLSRWQRLQVAYQARFSR 265


>gi|55710094|gb|AAV58897.1| squalene synthase [Centella asiatica]
          Length = 415

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 71/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L      P  R ++   Y     L  V D    +   +   L+ 
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILKA 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +      +               +     S   L +   Y    +     + A       
Sbjct: 97  FHRHIYDNNWHFSCGTKEYKILMDEFHHVSNAFLELGSGYKEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      AS  +    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLASDSLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L ++    + M  
Sbjct: 217 DINEIPKSRMFWPRKIWNKYVNKLEDLKYEENSVKAVQCLNDMVTNALLHVEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDPAIFRFCAIPQIMAIGTL-ALCYNNLQVFRGVVKMRR 315


>gi|53804819|ref|YP_113313.1| squalene synthase [Methylococcus capsulatus str. Bath]
 gi|53758580|gb|AAU92871.1| squalene synthase [Methylococcus capsulatus str. Bath]
          Length = 362

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/292 (9%), Positives = 61/292 (20%), Gaps = 43/292 (14%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR--------------L 77
                L     P      +S  Y     +  + D      T+  R               
Sbjct: 29  SRTFALTIPRLPEGLARPVSNGYLLCRIVDTIEDEVALTSTQKRRYCEHFARVVAGTAPA 88

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN------- 130
               D            +       +  ++           + +                
Sbjct: 89  APLADELFPLLSDQTLAAERELIAAIPRVISITHGFAAPQQEALAECVATMSRGMAEFQD 148

Query: 131 ----DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------YAGIAQFIG 180
                 + D +Q   Y + ++  +  + T +        +    +        G    + 
Sbjct: 149 KDLRHGLEDLRQMGDYCYYVAGVVGEMLTRLFCHYSPEIAAHRSRLMELAVSFGQGLQMT 208

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  L   + RG  + P ++    G           +       +    +   +L  A 
Sbjct: 209 NILKDLWDDHARGVCWLPQEVFTECGFSLTELRPHHANPDFVRGFERLIGVAHAHLRNAL 268

Query: 241 EEMRYILPD-------VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           E    I             A     +    L+    H +   S S       
Sbjct: 269 EYTLLIPRHETGIREFCLWALGMAVL---TLRKIHRHPY--FSDSAQVKITR 315


>gi|308177143|ref|YP_003916549.1| phytoene synthase [Arthrobacter arilaitensis Re117]
 gi|307744606|emb|CBT75578.1| phytoene synthase [Arthrobacter arilaitensis Re117]
          Length = 314

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/281 (8%), Positives = 66/281 (23%), Gaps = 37/281 (13%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA------RNPITRDMRLQWWKDI 83
           +      LAC L        ++ +Y        + D         +P       +   + 
Sbjct: 33  EYSTSFSLACRLLDASSAGHIANIYALVRLADEIVDGVAFQAGLDDPAIGACLDELEAET 92

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
             +  +G    S +          R   +  +       +   D       D +  + Y 
Sbjct: 93  LRAMDRGY---STNMVVHAFAITARATGIKAELTTPFFASMRADLSTGEH-DARSLQEYI 148

Query: 144 FRISSRLIHLATMIL---------DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-G 193
           +  +  +  +   +          +      +    +  G A      +  L       G
Sbjct: 149 YGSAEVIGLMCLQVFAAMPGAPQLNRAEEQRTKLAARSLGAAFQKVNFLRDLAQDSQELG 208

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI-LPDVFP 252
           + YFP           ++                      + L  AR  + Y+       
Sbjct: 209 RTYFPGMDPEGFDEQGKAL---------------LVAQINQDLAAARAGLPYLAPQAARA 253

Query: 253 AFIPVSITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLS 292
             +   + + +    +      ++    + +   +    L 
Sbjct: 254 VCLAHDLFQELNVQLEKVPAAALLRTRISVSAPRKAMIALR 294


>gi|327243161|gb|AEA41713.1| squalene synthase [Eleutherococcus senticosus]
 gi|327243165|gb|AEA41715.1| squalene synthase [Eleutherococcus senticosus]
 gi|327243169|gb|AEA41717.1| squalene synthase [Eleutherococcus senticosus]
          Length = 415

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 70/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L      P  R ++   Y     L  V D    +   +   L  
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILIA 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +      +               +     S   L +   Y    +     + A       
Sbjct: 97  FHRHIYDNDWHFSCGTKEYKVLMDEFHHVSNAFLELGSGYKDAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  V    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASGLEDLATDSVSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L ++    + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSIYVDKLEDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDPAIFRFCAIPQIMAIGTL-ALCYNNIQVFRGVVKLRR 315


>gi|240276613|gb|EER40124.1| squalene synthetase [Ajellomyces capsulatus H143]
          Length = 457

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 80/294 (27%), Gaps = 31/294 (10%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++EK  S         L           +   P   + +   Y     L  + D    
Sbjct: 31  HERDEKNVSETQKKCFEFLELTSRSFSAVIMELHPELLLPVCLFYLALRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P  T++  L+ + +I E            E      V+  ++V ++ L    +  +I+  
Sbjct: 91  PLQTKEPLLRDFHNILEKDGWSFNGNRPEEKDRELLVQFHNVVTEFKLIKPAYRTIIKDT 150

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                                +   K+++ Y + ++  +    T +              
Sbjct: 151 TKKMGSGMADYCRKAELDTAKVKTVKEYDLYCYYVAGIVGEGLTRLFLFISM-------- 202

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G+      +I  +   Y   + ++P +I      D E     +N +            
Sbjct: 203 --GLFLQKTNIIRDVKEDYVDNRCFWPQEIWSKHVDDFEDLFKRENREAALNCNSEMILN 260

Query: 232 GLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            L +  +    +  +          IP S+  + L         I   +    +
Sbjct: 261 ALGHADECLFYLAGLREQSVFNFCAIPQSMAIATL-ELCFRNEAIFERNIKITK 313


>gi|318081216|ref|ZP_07988548.1| phytoene synthase [Streptomyces sp. SA3_actF]
          Length = 171

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 6/169 (3%)

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFI 179
           + A   D         +    Y    ++ +   +  ++      + +       G A  +
Sbjct: 1   MTAMRADLAVTDYATYEDLCGYMHGSAAVIGLQMLPVLGTVVPRAEAAPHAAALGRAFQL 60

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESF----LSGQNSDRISLAIKIFAELGLKY 235
              +  +     RG++Y P D+L A G+DR        SG    RI+ A++  A L    
Sbjct: 61  TNFLRDVGEDLDRGRVYLPADLLAAHGVDRPLLEWSRASGTRDARITAALRAAAALTRGV 120

Query: 236 LFKAREEMRYILPDVFPAFIPV-SITESVLKHAQNHGFKIVSHSHTPNQ 283
             +A   +  + P   P       +   +L      G+  V       +
Sbjct: 121 YREAAPGLAMLDPVARPCIRTAFVLYGGILDAVAADGYAAVHRRAAVPR 169


>gi|94314536|ref|YP_587745.1| Squalene/phytoene synthase [Cupriavidus metallidurans CH34]
 gi|93358388|gb|ABF12476.1| Squalene/phytoene synthase [Cupriavidus metallidurans CH34]
          Length = 353

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 66/270 (24%), Gaps = 39/270 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW------- 79
            L+ +    YL   + P   R  +   Y        + DT+  P  + + L         
Sbjct: 13  LLKGVSRSFYLTLRILPEGMRDPVGLAYLLARAADTIADTSLIPPVQRLDLLLALRQHVN 72

Query: 80  -------WKDIFESSTKGLIAESISPFSVEL---------LSIVRQYDLPNQYFLDMIEA 123
                        +       +S     +E                          + E 
Sbjct: 73  GTQNDGSLAQRLSAEVASQQTQSDEKVLLESIGPALGVLSQLDASDCTAVRGIVDTLTEG 132

Query: 124 HFFDSYNDSIF---------DCKQFEHYAFRISSRLIHLATMILDSERY-------SASL 167
             FD                   + + Y + ++  +    T +  + +           L
Sbjct: 133 MEFDLRTFPDERSGQVAALRTMDELDRYTYLVAGCVGEFWTTMTYAHQPGTLTAAPETML 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
           R     G A  +  ++         G+ Y P +IL   G+     +   N+ R    +  
Sbjct: 193 RRGVRFGKALQMVNVLRDCGKDLRIGRCYLPTEILERHGMTPRDLMDPANALRARPILDE 252

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPV 257
              + L +  +A      I        +  
Sbjct: 253 LLHVSLAHFREAMAYTFAIPRTAIRLRLAC 282


>gi|50420093|ref|XP_458579.1| DEHA2D02552p [Debaryomyces hansenii CBS767]
 gi|49654246|emb|CAG86711.1| DEHA2D02552p [Debaryomyces hansenii]
          Length = 447

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 83/295 (28%), Gaps = 30/295 (10%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
           S+ S      L               P  R ++   Y     L  V D     P  +   
Sbjct: 36  SQASKRCYELLNITSRSFAAVIQELHPELRDAVMLFYLILRALDTVEDDMTIEPEIKVPL 95

Query: 77  LQWWKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI--------EAH 124
           L+ + D            S +       VE   I+ +Y    + + D+I           
Sbjct: 96  LRTFHDKLNLKEWSFDGNSKTEKDRCVLVEFPCILTEYHKLKEDYQDIIKHITKEMGNGM 155

Query: 125 FFDSYNDSI-----FDCKQFEHYAFRISSRLIHLATMIL------DSERYSASLRVIKYA 173
                +D+         ++++ Y   ++  +    T ++      D+     +    +  
Sbjct: 156 ADYILDDNFNVNGVATVREYDLYCHYVAGLVGEGLTKLMVLAGFSDNSLSQDNFAKSESM 215

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRIS---LAIKIFAE 230
           G+      +I         G+ ++P +I         SF    + +        I     
Sbjct: 216 GLFLQKTNIIRDYHEDLEDGRSFWPKEIWEKHTSSLPSFHKDTSLESQGHGLACINELVL 275

Query: 231 LGLKYLFKAREEMRYI-LPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             L ++      +  +  P  F    IP  +  S L    N+   ++  +    +
Sbjct: 276 NALCHVKDVLTYLSLVRDPSCFNFCAIPQVMAISTLALVYNNP-NVLHGNVKIRK 329


>gi|221210169|ref|ZP_03583150.1| squalene/phytoene synthase [Burkholderia multivorans CGD1]
 gi|221170857|gb|EEE03323.1| squalene/phytoene synthase [Burkholderia multivorans CGD1]
          Length = 351

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 78/311 (25%), Gaps = 43/311 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDI- 83
             L+++    YL   + P   R  +   Y        + DTA   P  R   L   +D  
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPERRAALLNALRDEI 72

Query: 84  ------------FESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        +  T+             +  ++     Q +        ++      
Sbjct: 73  ERLGDGVALSAALDDVTRMQTDSHEHVLLGSMQPMLALLRAQPEADRTSIRKVVATLTSG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D              +      + Y + ++  +    T +      +A    +    
Sbjct: 133 MEFDLRTFPDEQSGQLAVLPTRDVLDRYTYLVAGCVGEFWTDMTAMHTRAARGWDVPAMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L A GL     L+     R    +  
Sbjct: 193 ERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLAAHGLRAADLLAPDAYPRARGVLFD 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKI-VSHSHTPN 282
              + L     A      I             P+ I    L+    H   +  +      
Sbjct: 253 LLRVALDQYRDACAYTVAIPRRFVRLRLACLWPILIGLETLELLAGHDGWLDPAKPAKVP 312

Query: 283 QLVRPWYMLSS 293
           +      M SS
Sbjct: 313 RKRIYRIMASS 323


>gi|78062599|ref|YP_372507.1| farnesyl-diphosphate farnesyltransferase [Burkholderia sp. 383]
 gi|77970484|gb|ABB11863.1| farnesyl-diphosphate farnesyltransferase [Burkholderia sp. 383]
          Length = 354

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 68/270 (25%), Gaps = 38/270 (14%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI- 83
             L+++    YL   + P   R  +   Y        + DTA   P  R   L   +D  
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTDLRDEV 72

Query: 84  ------------FESSTKGLIAESIS-------PFSVELLSIVRQYDLPNQYFLDMIEAH 124
                        E  T+               P    L +         +  +  + A 
Sbjct: 73  ERLGDGVALSRALEDVTRMQTDSHEHVLLGSVEPMLALLRTQPDADRASIRKVVATLTAG 132

Query: 125 FFDSYNDSI----------FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
                                  + + Y + ++  +    T +      +A    +    
Sbjct: 133 MVFDLRTFPDEQSGRVTSLPTRGELDRYTYLVAGCVGEFWTDMTGMHTPAARGWNLPDMC 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+LGA GL     ++   S R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCGKDLRIGRCYLPDDVLGAHGLVVSDLMAPDASARARGVLVD 252

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPV 257
              + L     A      I        +  
Sbjct: 253 LLRVTLDQYRDACLYTLAIPRRFVRLRLAC 282


>gi|71407970|ref|XP_806417.1| farnesyltransferase [Trypanosoma cruzi strain CL Brener]
 gi|70870160|gb|EAN84566.1| farnesyltransferase, putative [Trypanosoma cruzi]
          Length = 404

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 78/286 (27%), Gaps = 21/286 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMR 76
             D  F    L+ +     +  +      R ++   Y     L  V D    P+  +   
Sbjct: 28  DEDLRFCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRE 87

Query: 77  LQWWKDIFESSTKGLIA----------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           L  + +    +T  +            E  +  +     + + Y        + +     
Sbjct: 88  LPKFHEHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMC 147

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQ 181
           D     +     ++ Y   ++  + H  T++  S                + G+      
Sbjct: 148 DFLTRKVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTN 207

Query: 182 LICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
           +I            ++++P +I      D  +F    +  +    +       L ++   
Sbjct: 208 IIRDFYEDICEVPPRVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVADALVHVPHV 267

Query: 240 REEMRYILPDVFPAF--IPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            E +  +      AF  IP  +  + L     +   +        +
Sbjct: 268 VEYLASLRDPSVFAFSAIPQVMAMATLS-LVFNNKDVFHTKVKTTR 312


>gi|83717902|ref|YP_440344.1| squalene/phytoene synthase family protein [Burkholderia
           thailandensis E264]
 gi|83651727|gb|ABC35791.1| squalene/phytoene synthase family protein [Burkholderia
           thailandensis E264]
          Length = 564

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 83/302 (27%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
            L+ +    YL   + P   R  +   Y        + DT+  P  + + L         
Sbjct: 228 LLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 287

Query: 78  ------QWWKDIFESSTKGLIAESISPF-----SVELLSIVRQYDLPNQYFLDMIEAHFF 126
                    +   E + +   ++  +       ++ +LS +  +D      +        
Sbjct: 288 GVPDPQALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLSAFDRAAVRGVVTTLTEGM 347

Query: 127 DSYNDSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
           +    +  D             Q + Y + ++  +    T +  +        R      
Sbjct: 348 EFDLRTFPDESSGRIVALREWPQLDRYTYLVAGCVGEFWTRMTCAHLPGLLSEREDTMAE 407

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 408 RGIRFGKALQMTNVLRDCGKDLRIGRCYLPQAMLSEYGLCAEDLLRPDASPRARPLMHAL 467

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L++     +    I           F P++I    L    ++           +++
Sbjct: 468 VRTTLEHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLQTLALLASN--DAWLDPARASKV 525

Query: 285 VR 286
            R
Sbjct: 526 RR 527


>gi|227548204|ref|ZP_03978253.1| phytoene synthase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079765|gb|EEI17728.1| phytoene synthase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 283

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/281 (10%), Positives = 67/281 (23%), Gaps = 28/281 (9%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
            + +        LA     P  R  +  LY        + D         +   +   + 
Sbjct: 19  AQVIAQYSTSFSLATRFLAPRVRTDVRNLYAMVRIADEIVDGTAGADAAQLLDAYETQVL 78

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
            +           P      +  R+ D   ++      +   D    +  +  +F+ Y +
Sbjct: 79  AAPAARFH---TDPVLHAWANSARRCDFSAEHVTAFFASMRRDLNQSTY-NPAEFDAYVY 134

Query: 145 RISSRLIHLATMILDSERY------SASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYF 197
             +  +  +      +E        +      +  G A      +  L       G+ YF
Sbjct: 135 GSAEVIGLMCVSAFVAEEPVPASTRAELDDGARALGSAFQKVNFLRDLAEDRENLGRTYF 194

Query: 198 PLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
           P                 +  D +              L +AR  +  I      A    
Sbjct: 195 PQ------------LGEREIDDAVKA---ELVADIRADLARARRAIGLIPGSARGAVAAA 239

Query: 258 SITESVLKHA--QNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
               S L           + +   +  +  + +    +  +
Sbjct: 240 EALFSELTELIDATPAATLATTRISVPRHRKLYVTAKALRR 280


>gi|224077896|ref|XP_002305455.1| predicted protein [Populus trichocarpa]
 gi|222848419|gb|EEE85966.1| predicted protein [Populus trichocarpa]
          Length = 413

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/280 (9%), Positives = 72/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQ 78
             F    L  +     L         R ++   Y     L  V D    P      + + 
Sbjct: 37  WAFCYSMLPRVSRSFALVIQQLDTELRNAVCVFYLVLRALDTVEDDTSIPTDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDHDWHFSCGTKEYKVLMDQFHNVSNAFLELGKGYQEAIEDITKRMGAGMAKFIL 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 KEVESIDDYDEYCHYVAGLVGLGLSKLFHASGLEDLAPDSISNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P +I        E     +NS +    +       L ++    + +  
Sbjct: 217 DINEIPKSRMFWPREIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALIHMDDCLKYLSE 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +   +        +
Sbjct: 277 LRDPAIFRFCAIPQIMAIGTL-ALCYNNVNVFRGVVKMRR 315


>gi|126444694|ref|YP_001061424.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 668]
 gi|126224185|gb|ABN87690.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 668]
          Length = 349

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 70/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 13  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 73  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSPPDRAAVRGVVTTLTEGM 132

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 133 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPDASLRARPLMHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 253 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|170735641|ref|YP_001776901.1| squalene/phytoene synthase [Burkholderia cenocepacia MC0-3]
 gi|169817829|gb|ACA92411.1| Squalene/phytoene synthase [Burkholderia cenocepacia MC0-3]
          Length = 355

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 75/306 (24%), Gaps = 50/306 (16%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-------- 77
             L+++    YL   + P   R  +   Y        + DTA     R   L        
Sbjct: 13  ELLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTDLRDDI 72

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        E  T+             +  ++     Q +        ++      
Sbjct: 73  ERLGDGAALSRSLEDVTRMQTDSHEHLLLGSMEPMLALLRAQPEADRASIRKVVATLTAG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+      + Y + ++  +    T +  +   +A    +    
Sbjct: 133 MEFDLRTFPHEQSGQVASLPTRDMLDRYTYLVAGCVGEFWTDMTGAHTRAARGWDLPDMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+LGA GL     +  + S+R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLGAHGLVVADLMQPEASERARGVLVD 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQ--------NHGFKIV 275
              + L     A      I             P+ I    L+               K+ 
Sbjct: 253 LLRVALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGHAAWLDPAKPAKVP 312

Query: 276 SHSHTP 281
                 
Sbjct: 313 RKRVYR 318


>gi|85703326|ref|ZP_01034430.1| hypothetical protein ROS217_21332 [Roseovarius sp. 217]
 gi|85672254|gb|EAQ27111.1| hypothetical protein ROS217_21332 [Roseovarius sp. 217]
          Length = 260

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 58/285 (20%), Positives = 97/285 (34%), Gaps = 27/285 (9%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
           + F  D       +R  D +R+LA + +P   R  L  +Y F+ E+ R     + P+  +
Sbjct: 3   QSFDADLTACADLVRRADPERFLAAMAAPVAARAVLFPVYAFNIEVARAPWVTQEPMIAE 62

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           MRLQWW D  E    G +          L  ++           D++EA  +D   +   
Sbjct: 63  MRLQWWADALEEIAAGGLM-RRHEVVTPLAHVLDASG--AALLTDLVEARRWDITREPFE 119

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ 194
           D   F HY    S                 A+  V++ AG A  +      +P     G+
Sbjct: 120 DAAAFTHYIETTSGN----LLQAAALALGPAAPEVLRDAGYALGLANWFRAIPALEAAGR 175

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
                                   D    A++  A+ GL  L +AR   R +      A 
Sbjct: 176 KPLV--------------------DGRPEAVRALAKDGLARLRRARAARRQVSRAAGAAL 215

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           +P+ +   VL+ A      +               +L+ S+  R+
Sbjct: 216 LPLWLAGPVLRQALRDPRAVAEGRLGVAPARAQLSLLARSLTGRW 260


>gi|297802496|ref|XP_002869132.1| squalene synthase 2 [Arabidopsis lyrata subsp. lyrata]
 gi|297314968|gb|EFH45391.1| squalene synthase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 413

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 26/282 (9%), Positives = 75/282 (26%), Gaps = 20/282 (7%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQ 78
             F    L  +     L         R ++   Y     L  V D    P+     + + 
Sbjct: 37  LAFCYSMLHKVSKSFSLVIQQLGTELRNAVCVFYLILRALDTVEDDTSIPMETKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + +++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHLYDGGWHFSCGTKDYKVLMDQFHHVSAAFLELEKGYQEAIEDITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS----ASLRVIKYAGIAQFIGQLICQL 186
             +     ++ Y    +  +    + I  +           ++    G+      +I   
Sbjct: 157 KEVETIDDYDEYCHYAAGLVGLGLSKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDY 216

Query: 187 PIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
               +   + ++++P +I G      E   + + S +    +       L ++    + +
Sbjct: 217 LEDINEIPKSRMFWPREIWGKYVDKLEDLKNEEKSTQAVQCLNEMVTNALTHVEDCLKSL 276

Query: 244 RYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             +          IP  +    L     +  ++   +    +
Sbjct: 277 ASLRDPAIFQSCAIPQIVAIGTLT-LCYNNVQVFRGAVRLRR 317


>gi|323136954|ref|ZP_08072034.1| squalene synthase HpnC [Methylocystis sp. ATCC 49242]
 gi|322397715|gb|EFY00237.1| squalene synthase HpnC [Methylocystis sp. ATCC 49242]
          Length = 292

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 67/245 (27%), Gaps = 9/245 (3%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             D +  +A +L  P +R  +   Y F      + D     +T   +L     +      
Sbjct: 13  HRDENFPVASVLIAPRFRAPIMAFYNFVRAADDISD--HPTLTPQEKLDLLDRL---DAA 67

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
            + +    P +  L     +  L  Q+  D+I A   D       D      Y    +  
Sbjct: 68  LMGSGPDEPVAARLRETCVERRLDRQHARDLIIAFKRDVDYLRYRDWDDLIFYCRYSAMP 127

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLD 208
           +      +                  A  +   +      Y    ++Y   + L A G +
Sbjct: 128 VGRFVLDVHGENAGRTWAA-NDALCAALQVINHLQDCGKDYRDLDRVYLTQESLAAHGAE 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL--PDVFPAFIPVSITESVLKH 266
            E     +    +   I+   E     L ++R     I             ++ E ++  
Sbjct: 187 VEMLGEARAPAPLLATIRDLNEKTAGLLDQSRPFADLIDDVRLAMEVGAIQALAEKLVAR 246

Query: 267 AQNHG 271
            +   
Sbjct: 247 LRVAD 251


>gi|53716226|ref|YP_106390.1| squalene/phytoene synthase family protein [Burkholderia mallei ATCC
           23344]
 gi|238561757|ref|ZP_00441592.2| squalene/phytoene synthase family protein [Burkholderia mallei GB8
           horse 4]
 gi|251768265|ref|ZP_02270052.2| squalene/phytoene synthase family protein [Burkholderia mallei
           PRL-20]
 gi|254176621|ref|ZP_04883279.1| squalene/phytoene synthase family protein [Burkholderia mallei ATCC
           10399]
 gi|262192850|ref|YP_001079279.2| squalene/phytoene synthase family protein [Burkholderia mallei NCTC
           10247]
 gi|52422196|gb|AAU45766.1| squalene/phytoene synthase family protein [Burkholderia mallei ATCC
           23344]
 gi|160697663|gb|EDP87633.1| squalene/phytoene synthase family protein [Burkholderia mallei ATCC
           10399]
 gi|238524044|gb|EEP87479.1| squalene/phytoene synthase family protein [Burkholderia mallei GB8
           horse 4]
 gi|243060350|gb|EES42536.1| squalene/phytoene synthase family protein [Burkholderia mallei
           PRL-20]
 gi|261826932|gb|ABM99262.2| squalene/phytoene synthase family protein [Burkholderia mallei NCTC
           10229]
 gi|261835018|gb|ABO03462.2| squalene/phytoene synthase family protein [Burkholderia mallei NCTC
           10247]
          Length = 356

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 71/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 20  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 79

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 80  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 139

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 140 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 199

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R+   +   
Sbjct: 200 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPDASLRVRPLMHAL 259

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 260 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 317

Query: 285 VR 286
            R
Sbjct: 318 RR 319


>gi|123718158|emb|CAJ58418.1| squalene synthase [Panax quinquefolius]
          Length = 415

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 76/289 (26%), Gaps = 19/289 (6%)

Query: 13  EEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NP 70
           E++I S     F    L  +     L      P  R ++   Y     L  V D    + 
Sbjct: 28  EKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSIST 87

Query: 71  ITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMI 121
             +   L  +      +               +     S   L +   Y    +     +
Sbjct: 88  EVKVPILMAFHRHIYDNDWHFSCGTKEYKVLMDEFHHVSNAFLDLGSGYKEAIEDITMRM 147

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFI 179
            A         +     ++ Y   ++  +    + +  +      A+  +    G+    
Sbjct: 148 GAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDSLSNSMGLFLQK 207

Query: 180 GQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +I       +   + ++++P  I        E     +NS +    +       L ++
Sbjct: 208 TNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSGKAVQCLNDMVTNALLHV 267

Query: 237 FKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               + M  +          IP  ++   L     +  ++        +
Sbjct: 268 EDCLKYMSDLRDPAIFRFCAIPQIVSIGTL-ALCYNNIQVFRGVVKMRR 315


>gi|124382691|ref|YP_001024936.1| squalene/phytoene synthase family protein [Burkholderia mallei NCTC
           10229]
          Length = 349

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 71/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 13  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 73  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 133 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R+   +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPDASLRVRPLMHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 253 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|285013332|gb|ADC32654.1| squalene synthase [Aralia elata]
          Length = 414

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 71/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQ 78
             F    L  +     L      P  R ++   Y     L  V D    P      + + 
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I+E                +     S   L +   Y    +     + A       
Sbjct: 97  FHRHIYEKDWHFSCGTKEYKVLMDEFHHLSNAFLELGSGYQEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  +    G+      +I     
Sbjct: 157 KEVETVGDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P           E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQSWSKYVDKLEDLKYEENSAKAVQCLNDMVTNALLHAEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDPAIFRFCAIPQIMAIGTL-ALCFNNIQVFRGVVKMRR 315


>gi|1552717|gb|AAB08578.1| squalene synthase [Nicotiana tabacum]
          Length = 411

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 70/278 (25%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL----- 77
           F    L  +     L     P   R ++   Y     L  V D    P    + +     
Sbjct: 39  FCYSMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFH 98

Query: 78  -----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                + W     +    ++ +     S   L + + Y    +     + A         
Sbjct: 99  QHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +      AS  +    G+      +I       
Sbjct: 159 VETTDDYDEYCHYVAGLVGLGLSKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 HRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +      +++P +I        E      NS +    +       L ++      M  + 
Sbjct: 219 NEVPKCRMFWPREIWSKYVNKLEELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALR 278

Query: 247 -LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                    IP  +    L        ++        +
Sbjct: 279 DPSIFRFCAIPQVMAIGTL-AMCYDNIEVFRGVVKMRR 315


>gi|3164081|emb|CAA71097.1| squalene synthase [Methylococcus capsulatus str. Bath]
          Length = 362

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/292 (9%), Positives = 61/292 (20%), Gaps = 43/292 (14%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR--------------L 77
                L     P      +S  Y     +  + D      T+  R               
Sbjct: 29  SRTFALTIPRLPEGLARPVSNGYLLCRIVDTIEDEVALTSTQKRRYCEHFARVVAGTAPA 88

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN------- 130
               D            +       +  ++           + +                
Sbjct: 89  APLADELFPLLSDQTLAAERELIAAIPRVISITHGFAAPQQEALAECVATMSRGMAEFQD 148

Query: 131 ----DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY------AGIAQFIG 180
                 + D +Q   Y + ++  +  + T +        +    +        G    + 
Sbjct: 149 KDLRHGLEDLRQMGDYCYYVAGVVGEMLTRLFCHYSPEIAAHRSRLMELACPFGQGLQMT 208

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  L   + RG  + P ++    G           +       +    +   +L  A 
Sbjct: 209 NILKDLWDDHARGVCWLPQEVFTECGFSLTELRPHHANPDFVRGFERLIGVAHAHLRNAL 268

Query: 241 EEMRYILPD-------VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           E    I             A     +    L+    H +   S S       
Sbjct: 269 EYTLLIPRHETGIREFCLWALGMAVL---TLRKIHRHPY--FSDSAQVKITR 315


>gi|206563249|ref|YP_002234012.1| putative squalene/phytoene synthase [Burkholderia cenocepacia
           J2315]
 gi|198039289|emb|CAR55254.1| putative squalene/phytoene synthase [Burkholderia cenocepacia
           J2315]
          Length = 355

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 85/312 (27%), Gaps = 42/312 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI- 83
             L+++    YL   + P   R  +   Y        + DTA   P  R   L   +D  
Sbjct: 13  ELLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTDLRDDI 72

Query: 84  ------------FESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        E  T+             +  ++     Q +        ++      
Sbjct: 73  ERLGDGVALSRSLEDVTRLQTDSHEHVLLGSMEPMLALLRAQPEADRASIRKVVATLTAG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+      + Y + ++  +    T +  +   +A    +    
Sbjct: 133 MEFDLRTFPDEQSGQVASLPTRDVLDRYTYLVAGCVGEFWTDMTGAHTRAARGWDLPDMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L A GL     +  + S+R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLRAHGLVVADLMQPEASERARGVLVD 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
              + L     A      I             P+ I    L+    H   +         
Sbjct: 253 LLRVALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGHDAWLDPAKPAKVP 312

Query: 284 LVRPWYMLSSSI 295
             R + ++++S+
Sbjct: 313 RKRIYRIMAASL 324


>gi|16519644|ref|NP_443764.1| putative phytoene synthase-like protein [Sinorhizobium fredii
           NGR234]
 gi|2496576|sp|P55351|Y4AD_RHISN RecName: Full=Uncharacterized protein y4aD
 gi|2182293|gb|AAB91602.1| putative phytoene synthase-like protein [Sinorhizobium fredii
           NGR234]
          Length = 292

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 78/261 (29%), Gaps = 16/261 (6%)

Query: 33  YDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKGL 91
            +  +A  +  P +R  +   Y F      + D A   P  + + L   +       +  
Sbjct: 16  KNFPVASWIIHPRHRALILAFYRFVRMADDIADHATLAPDEKLLYLDLLEAELLGKGETR 75

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
                   +V L + + +  +P ++ LD++ A   D       +  +   Y    +  + 
Sbjct: 76  AE------AVHLRTALDRRGMPPRHALDLLTAFRMDVTKQRYENWDEVIDYCRYSAMPVG 129

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDILGAVGLDRE 210
                +      +A+            +   +        +  ++Y P D L A G   E
Sbjct: 130 RFV--LDVHGESAATWPASDVLCAGLQVCNHLQDCGKDFLNLNRVYIPRDALSASGASIE 187

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI---TESVLKHA 267
              + ++S ++   ++  A      L      +  +  D    F    I    + ++   
Sbjct: 188 ELGAAKSSLQMLQCLRSLAAKAEVLLNGGGALVSQV-KDFRLRFEVSVILSFADKIVSML 246

Query: 268 QNHGFKIVSHSHTPNQLVRPW 288
           +      +      + L    
Sbjct: 247 KMR--DPLRERVHLSPLELLL 265


>gi|258593654|emb|CBE69995.1| Farnesyl-diphosphate farnesyltransferase [NC10 bacterium 'Dutch
           sediment']
          Length = 353

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 87/312 (27%), Gaps = 44/312 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKD--- 82
            L+ +    YL     P   R  +   Y        + DTA      R   L+ ++D   
Sbjct: 20  LLKRVSRSFYLTLRAVPADLRRPIGLAYLLARAADTIADTALIGRADRLKHLELFRDVIR 79

Query: 83  -----IFESSTKGLIAESISPFSVELLSIVRQ------------YDLPNQYFLDMIEAHF 125
                   + T  L+         ELL+ + +              +     L + +   
Sbjct: 80  EGRPERLSAITNVLVERQRDAAERELLTRLEEGLAILLSLTPSDQTMVRDVVLTLTDGMV 139

Query: 126 FDSYN---------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK----- 171
            D             S+      + Y + ++  +    T I  + R S +    +     
Sbjct: 140 MDLAAFPGEDGERLVSLETRADLDRYTYYVAGCVGEFWTDIHLAHRPSLAGWDREVMRRR 199

Query: 172 --YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
               G    +  ++  L      G+ Y P   L A+GL     L+     ++   +    
Sbjct: 200 GVRFGKGLQMTNVLRDLSKDLRIGRCYLPRQELNALGLQPADLLNPSAIAKVKPLLYSLL 259

Query: 230 ELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSH--TPNQ 283
            L L++  +       I            +P+ I    L         ++  S     ++
Sbjct: 260 ALALEHYQEGWAYTLAIPRREVRMRLACVLPLFIGLKTLALLARSP-NLLDPSVVIKVSR 318

Query: 284 LVRPWYMLSSSI 295
                 M  S +
Sbjct: 319 GAVYGIMARSLV 330


>gi|254570851|ref|XP_002492535.1| Farnesyl-diphosphate farnesyl transferase (squalene synthase)
           [Pichia pastoris GS115]
 gi|238032333|emb|CAY70356.1| Farnesyl-diphosphate farnesyl transferase (squalene synthase)
           [Pichia pastoris GS115]
          Length = 442

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/323 (11%), Positives = 90/323 (27%), Gaps = 30/323 (9%)

Query: 3   LKFLTKN-TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
            KF  ++   ++              L           L   P  R ++   Y     L 
Sbjct: 20  FKFFKQSLHPRQPTNERETLKHCYELLALTSRSFCTVILELNPELRNAIMIFYLVLRALD 79

Query: 62  RVRDTAR-NPITRDMRLQWWKDIF----ESSTKGLIAESISPFSVELLSIVRQYDLPNQY 116
            V D     P  +   L+ + +       S       E      V+   ++ +Y      
Sbjct: 80  TVEDDMTIKPDIKIPLLRSFDEKLNLKSWSFDGNSPDEKDRQVLVDFTDVLEEYHRLKPV 139

Query: 117 FLDMIEAHFFDSYNDS-------------IFDCKQFEHYAFRISSRLIHLATMI-----L 158
           + D+I+       N               +   K ++ Y   ++  +    T +      
Sbjct: 140 YQDVIKDITHKMGNGMADYITDEEFNLNGVATVKDYDLYCHYVAGLVGEGLTHLIVEAGF 199

Query: 159 DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNS 218
              +   ++++ +  G+      +I         G+ ++P +I          F   +N 
Sbjct: 200 GDPKLEDNMQLSESMGLFLQKTNIIRDYREDLDDGRSFWPKEIWSKYADSLSDFSKRENY 259

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVS 276
           ++    I       + ++      +  +          IP  +  + L     +  K+  
Sbjct: 260 EKGLDCISELVLNTMDHIKDVLVYLSSVYDFSSYNFCVIPQVMAIATLATVFRNE-KVFE 318

Query: 277 HSHTPNQLVRPWYMLSSSIKKRF 299
            +    +    + +L +   + F
Sbjct: 319 TNVKIRKGTTCYLILKA---RTF 338


>gi|292655297|ref|YP_003535194.1| farnesyl-diphosphate farnesyltransferase [Haloferax volcanii DS2]
 gi|291371503|gb|ADE03730.1| farnesyl-diphosphate farnesyltransferase [Haloferax volcanii DS2]
          Length = 358

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 87/295 (29%), Gaps = 41/295 (13%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
             D  +    ++ +     L   +        +   Y        V D++   P  +   
Sbjct: 13  DDDLDWCHDAVQGVSRTFALTVDVLDEPMASHICIGYLLCRIADTVEDSSSIAPDEQAHL 72

Query: 77  LQWWKDIFESSTKGLIAESISPF--------------------------SVELLSIVRQY 110
           L+ +    +S     + E ++                               L   VR+ 
Sbjct: 73  LRLYDRALDSDDDTTVDEFVAAVQPHLPPEGEQSDDWMVVANTARVFRTFEALPEDVREA 132

Query: 111 DLPNQYF----LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
             P        + M    +  +    I   ++ E Y +  +  + +L T ++      + 
Sbjct: 133 VTPPVRELVSGMAMFVERYSQTGGLRIQSREELEEYCYYAAGTVGNLITNLVTRGNVDSE 192

Query: 167 -----LRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDR 220
                    +  G+   +  +   +   Y     +Y P D L   G+ +E  +  +++DR
Sbjct: 193 RRSRLYDTAEEFGLLLQLVNIAKDVHDDYTSENNVYLPADWLDDAGVPQEEVVDPEHNDR 252

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPD---VFPAF-IPVSITESVLKHAQNHG 271
            +  +   A+    +L  A+  +  +         A+ IP  +    L+    + 
Sbjct: 253 TASVVARTADHAKSFLDDAQTYLETVPLREGNTLAAWAIPFLLAVGTLRELVANP 307


>gi|307726921|ref|YP_003910134.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1003]
 gi|307587446|gb|ADN60843.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1003]
          Length = 348

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/270 (11%), Positives = 69/270 (25%), Gaps = 39/270 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------------ARNPIT 72
            L+ +    YL   + P   R  +   Y        + DT               R+ + 
Sbjct: 13  LLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPARRLELLLSLRDQVN 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFD 127
                        +      ++S     +      L  + +  +   +   +++      
Sbjct: 73  GVASDGALFQRMAAEVADQQSQSDEKVLLESLGPALDVLAQLSESDRKAVREIVSTLTEG 132

Query: 128 SYN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSERY-------SASL 167
                 +  D             + + Y + ++  +    T +  +          ++  
Sbjct: 133 MEFDLRTFPDERSGRIAALHEYGELDRYTYLVAGCVGEFWTTMTYAHMPGTLKAQPASMK 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P  +L   GL  +  L   NS R    +  
Sbjct: 193 ARGVRFGKALQMTNVLRDCGKDLRIGRCYLPQTMLAQHGLSPQDLLLPANSLRARPLMVE 252

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPV 257
                L +  +A E    I        +  
Sbjct: 253 LLRKTLDHFREALEYTLAIPAFAVRLRLAC 282


>gi|76154183|gb|AAX25678.2| SJCHGC02511 protein [Schistosoma japonicum]
          Length = 195

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 1/167 (0%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
              + +   +   IF++   + L  +R  DY+ YL  LL P         +  F+ EL +
Sbjct: 5   FSTVNREIFRMPSIFAKTQPYCLNIVRKHDYENYLCSLLLPDSKCNFALAIRAFNVELAQ 64

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESIS-PFSVELLSIVRQYDLPNQYFLDMI 121
           V + ++N      R Q+WK++ E         S   P   EL        L    F  ++
Sbjct: 65  VCERSKNFEQAKYRFQFWKNVIEYLFDSSKDLSYDTPLKRELKESASGLGLSKFRFYQLV 124

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
            +        S   CK  E Y     + +  L +     +     L 
Sbjct: 125 NSREQHFNVSSFPTCKAAEAYFDDAYAPIHCLISEAYGFKFGRTFLW 171


>gi|259014869|gb|ACV88718.1| squalene synthase [Panax ginseng]
          Length = 415

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 71/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L      P  R ++   Y     L  V D    +   +   L  
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILMA 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +      +               +     S   L +   Y    +     + A       
Sbjct: 97  FHRHIYDNDWHFSCGTKEYKVLMDEFHHVSNAFLDLGSGYKEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  +    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L ++    + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  ++   L     +  ++        +
Sbjct: 277 LRDPAIFRFCAIPQIMSIGTL-ALCYNNIQVFRGVVKMRR 315


>gi|302551198|ref|ZP_07303540.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468816|gb|EFL31909.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 596

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 76/290 (26%), Gaps = 8/290 (2%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           ++           R  R+ D   Y    L PP  R +   L+     L  + D    P  
Sbjct: 22  DDPALRAAYGLCRRRTREQDPAEYALIQLVPPALRPACWALWAAANALDDLGDDRTAPAA 81

Query: 73  RDM-RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
               R++ W     S  +     S  P    LL    ++ L        +     D+   
Sbjct: 82  ERAARVEEWITALRS--ELPSGTSPDPIRHALLDTTARWGLDLSELDGAMTQVRDDTRGR 139

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQL 186
              D   +  +              + D           +    +       +  ++  L
Sbjct: 140 RFDDWAAWRTWGRDNLLPWFGQVRALFDRAGVPVALRMDTRETYEEFLDGVRLTDILTDL 199

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                +G L  P + +       +     + S  ++  +     L  +++ +        
Sbjct: 200 SADLAQGDLLLPDEAVRPFPGAAQDLAHRRWSPAVAALVTDLTGLARRWVSQDGLGRGMH 259

Query: 247 LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                      ++  + L      G  ++     P   VR   +  + ++
Sbjct: 260 PGPATVLDTMAALLRAQLDAIGRCGPALLRRRPRPALPVRARILAPARVR 309


>gi|260506059|gb|ACX42426.1| squalene synthase [Bupleurum chinense]
          Length = 415

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L      P  R ++   Y     L  V D    +   +   L  
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILME 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +     +++              +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYNNSWHFSCGTKEYKILMDEFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  +    G+      +I     
Sbjct: 157 KEVESIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +    +     IP  +    L     +  ++        +
Sbjct: 277 LRDPANFRFCAIPQIMAIGTLS-LCFNNIQVFRGVVKMRR 315


>gi|284164459|ref|YP_003402738.1| Squalene/phytoene synthase [Haloterrigena turkmenica DSM 5511]
 gi|284014114|gb|ADB60065.1| Squalene/phytoene synthase [Haloterrigena turkmenica DSM 5511]
          Length = 348

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/321 (9%), Positives = 83/321 (25%), Gaps = 39/321 (12%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR 68
            T + E     D  +    +  +     +            +   Y        + D   
Sbjct: 2   TTGQPEPPTDADLEWCYDAVHGVSRTFSITIDRLEEPMARHICLGYLLCRVADTIEDAGH 61

Query: 69  NPITRDMRLQWWKDIFESSTKGLI---------------AESISPFSVELLSIVRQY--- 110
            P      L    D                                  +   ++R +   
Sbjct: 62  IPPETQTELLTEYDRVLDPDADRTVSEFMADVEPWLPEERSEDWEVVAQTPRVLRTFESL 121

Query: 111 -----DLPNQYFLDMIEAHFFDSYNDSIF------DCKQFEHYAFRISSRLIHLATMI-- 157
                ++  +   ++++     +   +          ++ E Y +  +  +  L T +  
Sbjct: 122 DDEPREIMREPVRELVDGMAMFTDRYATEGGLRLQTIEELEEYCWYAAGTVGTLITGLVA 181

Query: 158 --LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLS 214
                ER        +   +   +  +   +   YH    +Y P + L A  +D E    
Sbjct: 182 RGTSRERADEMRENARSFALLLQLVNIAKDVEDDYHEENNVYLPAEWLAAENVDVEEVTD 241

Query: 215 GQNSDRISLAIKIFAELGLKYLFKAREEMRYIL---PDVFPAF-IPVSITESVLKHAQNH 270
             +   ++  I+       +YL  A+  +  +     +   A+ IP  +    L+  +  
Sbjct: 242 EAHHGGVTNVIQRVTGRAERYLDDAQRYLEVVPEHHGNRLSAWAIPYLLAVGTLRELRER 301

Query: 271 GFKIVSH-SHTPNQLVRPWYM 290
              ++       ++      +
Sbjct: 302 PEDVIREGDVKVSRAEVFALL 322


>gi|303277505|ref|XP_003058046.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460703|gb|EEH57997.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 454

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 82/294 (27%), Gaps = 21/294 (7%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-MRLQ 78
           +  F    L  +     +     P   + ++   Y     L  + D    P       L+
Sbjct: 35  NLAFCYDMLNKVSRSFAIVIQQLPHELQDAVCIFYLVLRALDTIEDDMAIPEKTKCPELE 94

Query: 79  WWKDIFESSTKGLIAESIS---------PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
            +                            +   LS+ ++Y          +     +  
Sbjct: 95  KFHQKIYDPKYVYPCGEKHYKRLMDEYTKVTAVFLSLKKEYQDVIADITKRMGKGMSNFI 154

Query: 130 NDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
              +   K ++ Y   ++  +        A  +L+ +R++    +    G+      +I 
Sbjct: 155 RREVVSLKDWDEYCHYVAGLVGIGLSNLWANSLLEDKRFAKEENLSNSMGLFLQKTNIIR 214

Query: 185 QLPIHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
                       ++++P  I    G   + F   +N D     +       L++   +  
Sbjct: 215 DYLEDIVEEPAPRMFWPKCIWSKYGETLDVFRHPENRDAAVSCMNHLITNALEHGLDSLA 274

Query: 242 EMRYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
            M+ +          IP  +  + L    ++G K+        + +    ML +
Sbjct: 275 YMKQLKNIDVFRFCAIPQVMAIATLAECYDNG-KVFEGVVKIRRGLSAQIMLKT 327


>gi|157873553|ref|XP_001685284.1| farnesyltransferase [Leishmania major strain Friedlin]
 gi|68128355|emb|CAJ08546.1| putative squalene synthase [Leishmania major strain Friedlin]
          Length = 414

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 87/314 (27%), Gaps = 22/314 (7%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTE 59
           M +K+  ++ + +      D  F    + D+     +    L+    R ++   Y     
Sbjct: 11  MRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDAICIFYLVLRA 70

Query: 60  LMRVRDTARNP-ITRDMRLQWWKDIFESSTKGLIA---------ESISP-FSVELLSIVR 108
           L  + D    P   +   L  +       +  +            +  P  S E   + +
Sbjct: 71  LDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLAKYPCVSREFKKLKK 130

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERY 163
           +Y        + +     +     +     +  Y   ++  +        A    +    
Sbjct: 131 EYQDVIANICERMANGMCEFLKRPVVTKDDYNQYCHYVAGLVGHGLTQLFARCGFEDPSL 190

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRI 221
              L    + G+      +I            ++++P +I G    + +   S  N+   
Sbjct: 191 DDDLTSSNHMGLFLQKTNIIRDYYEDIREEPPRMFWPKEIWGTYVTELKELKSESNNAAA 250

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L ++    + +  +          IP  +  + LK   N+         
Sbjct: 251 VQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNP-DTFQVKV 309

Query: 280 TPNQLVRPWYMLSS 293
             ++      ML +
Sbjct: 310 KVSRPESCRIMLKA 323


>gi|149245803|ref|XP_001527378.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449772|gb|EDK44028.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 391

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/368 (13%), Positives = 104/368 (28%), Gaps = 77/368 (20%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
             + K   +       + + L   D   Y+     P   R +   +  F+ E+ ++ +  
Sbjct: 23  SESEKYRALIHNSVDNITQTLEKADRSSYILAQYIPEPARETFLAIRAFNLEINKINEGG 82

Query: 68  RNPI-----------------TRDMRLQWWKDIFESSTKGLIAESIS---PFSVELLSIV 107
            N                   T D++ ++W D+ +         +     P ++ L + +
Sbjct: 83  ANTQSRASRASNQMSQTLGVSTADLKFKFWSDLIQRIFTEDPESTKDLGEPIAILLRNAL 142

Query: 108 RQY-DLPNQYFLDMIEAHFFDS-YNDSIFDCKQFEHYAFRISSRLIHLATMI-------- 157
           R    L   YF   ++        N           Y     S+L +L   +        
Sbjct: 143 RNNLHLDISYFQQFLQTRRHFIKTNAVFNTVDDICSYGEGTYSQLNYLTQGVLLSPLISP 202

Query: 158 -------LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDR 209
                    +   S    +  + G A  I  +I  L  +   R Q+  P+DI+    L +
Sbjct: 203 SSIKLLEYLNPLQSLVTDISAHIGQATAIASMINGLRFYASSRNQITLPVDIMTKNDLSQ 262

Query: 210 ESFLS---GQNSD--------RISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP-- 256
           ES L    G            ++   +   + +   ++  AR++++              
Sbjct: 263 ESLLRLFQGHADPTDARETVNKLKQVVYETSIVANDHILTARKKLKDFKEQAREVVASHS 322

Query: 257 --------------------------VSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
                                        T   L+  + H F ++S      +    W  
Sbjct: 323 NDAILQKYSKSWRGGVPDTIFTPMMVGIPTSLYLQRLEKHDFDVMSPKLQQQEWRLAWTS 382

Query: 291 LSSSIKKR 298
                +++
Sbjct: 383 FKDYYRRQ 390


>gi|260506058|gb|ACX42425.1| squalene synthase [Bupleurum chinense]
          Length = 414

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L      P  R ++   Y     L  V D    +   +   L  
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILME 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +     +++              +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYNNSWHFSCGTKEYKILMDEFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  +    G+      +I     
Sbjct: 157 KEVESIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +    +     IP  +    L     +  ++        +
Sbjct: 277 LRDPANFRFCAIPQIMAIGTLS-LCFNNIQVFRGVVKMRR 315


>gi|15236168|ref|NP_195190.1| SQS1 (SQUALENE SYNTHASE 1); farnesyl-diphosphate
           farnesyltransferase [Arabidopsis thaliana]
 gi|1706772|sp|P53799|FDFT_ARATH RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|798820|emb|CAA60385.1| farnesyl-diphosphate farnesyltransferase [Arabidopsis thaliana]
 gi|806325|dbj|BAA06103.1| squalene synthase [Arabidopsis thaliana]
 gi|2232212|gb|AAB62242.1| squalene synthase 1 [Arabidopsis thaliana]
 gi|3096933|emb|CAA18843.1| farnesyl-diphosphate farnesyltransferase [Arabidopsis thaliana]
 gi|4098519|gb|AAD00296.1| squalene synthase [Arabidopsis thaliana]
 gi|7270414|emb|CAB80181.1| farnesyl-diphosphate farnesyltransferase [Arabidopsis thaliana]
 gi|20466804|gb|AAM20719.1| putative squalene synthase [Arabidopsis thaliana]
 gi|28059678|gb|AAO30082.1| putative squalene synthase [Arabidopsis thaliana]
          Length = 410

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/280 (9%), Positives = 75/280 (26%), Gaps = 20/280 (7%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQWW 80
           F    L  +     L         R ++   Y     L  V D    P      + + + 
Sbjct: 39  FCYSMLHKVSRSFSLVIQQLNTELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFH 98

Query: 81  KDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           + I+++               +     S   L + + Y    +     + A         
Sbjct: 99  RHIYDTDWHYSCGTKEYKILMDQFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYA----GIAQFIGQLICQLPI 188
           +     ++ Y   ++  +    + +  +          +      G+      +I     
Sbjct: 159 VETVDDYDEYCHYVAGLVGLGLSKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLE 218

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P +I G      E     +N+++    +       L ++    + M  
Sbjct: 219 DINEIPKSRMFWPREIWGKYADKLEDLKYEENTNKSVQCLNEMVTNALMHIEDCLKYMVS 278

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 279 LRDPSIFRFCAIPQIMAIGTL-ALCYNNEQVFRGVVKLRR 317


>gi|308274254|emb|CBX30853.1| hypothetical protein N47_E43650 [uncultured Desulfobacterium sp.]
          Length = 365

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/292 (8%), Positives = 66/292 (22%), Gaps = 43/292 (14%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------- 68
             D     + L+ +     L     PP    + +  Y     +  + D            
Sbjct: 10  QDDYN--QQILQRVSRSFALTIPQLPPTLSRTTTIGYLLCRIVDTIEDEKDLSVAEKYSF 67

Query: 69  -----NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQY--------DLPNQ 115
                + +    + + + +            +          +++ +         + ++
Sbjct: 68  FKEFVDVVDGYAKAEAFAERLLPRLGENTLSAEKELVENCSLVIQAFLRLTSQEQAILSR 127

Query: 116 YFLDMIEAHFFDSYNDSI---FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK- 171
               M           S     D    + Y + ++  +  + T +  +     S    K 
Sbjct: 128 CVKIMSAGMLRFQELKSFQGLKDIAHVDSYCYHVAGVVGEMLTDLFCAYSPEISKHRKKL 187

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G    +  ++  L      G  + P D+    G D                + 
Sbjct: 188 YTLAPSFGQGLQMTNILKDLWDDRKSGSCWLPGDVFQKHGYDLSRLSEYVYEPTFGRGLS 247

Query: 227 IFAELGLKYLFKAREEMRYILPD-------VFPAFIPVSITESVLKHAQNHG 271
               +   +L  A      I             A          L + + + 
Sbjct: 248 ELIGITCAHLKNALTYTLMIPRHETGIRKFCLWAIGMAVC---TLGNIKKNP 296


>gi|221196538|ref|ZP_03569585.1| squalene/phytoene synthase [Burkholderia multivorans CGD2M]
 gi|221203207|ref|ZP_03576226.1| squalene/phytoene synthase [Burkholderia multivorans CGD2]
 gi|221177141|gb|EEE09569.1| squalene/phytoene synthase [Burkholderia multivorans CGD2]
 gi|221183092|gb|EEE15492.1| squalene/phytoene synthase [Burkholderia multivorans CGD2M]
          Length = 367

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 76/311 (24%), Gaps = 43/311 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDI- 83
             L+++    YL   + P   R  +   Y        + DTA   P  R   L   +D  
Sbjct: 29  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPERRAALLNALRDEI 88

Query: 84  ------------FESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                           T+             +  ++     Q D        ++      
Sbjct: 89  ERLGDGVALSAALHDVTRMQTDSHEHVLLGSMQPMLALLRAQPDADRTSIRKVVATLTSG 148

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D              +      + Y + ++  +    T +      +A    +    
Sbjct: 149 MEFDLRTFPDEQSGQLAVLPTRDVLDRYTYLVAGCVGEFWTDMTAMHTRAARGWDVPAMR 208

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D L A GL     L+     R    +  
Sbjct: 209 ERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDALAAHGLSAADLLAPDAYPRARGVLFD 268

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKI-VSHSHTPN 282
              + L     A      I             P+ I    L+    H   +  +      
Sbjct: 269 LLRVALDQYRDACTYTVAIPRRFVRLRLACLWPILIGLETLELLAGHDGWLDPAKPAKVP 328

Query: 283 QLVRPWYMLSS 293
           +      M SS
Sbjct: 329 RKRIYRIMASS 339


>gi|116788032|gb|ABK24732.1| unknown [Picea sitchensis]
          Length = 409

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 73/281 (25%), Gaps = 18/281 (6%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQ 78
           D  F    L+ +            P  R ++   Y     L  V D    P  T+   L+
Sbjct: 36  DLAFCFTMLQRVSRSFAFVIQQLGPDLRNAVCIFYLVLRGLDTVEDDTSIPLDTKLPILE 95

Query: 79  WWKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
            +       +              E     S   L + R Y    +     + A      
Sbjct: 96  AFYKHIYDPSWHFSCGVKDYKELMEKFHHVSTTFLRLGRGYQEAIEEITKRMGAGMAKFI 155

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV--IKYAGIAQFIGQLICQLP 187
              +   + ++ Y   ++  + +  + +  + +             G+      +I    
Sbjct: 156 CSEVESVEDYDEYCHYVAGLVGYGLSRLFHAAQLEDLQPDSLSNSMGLFLQKTNIIRDYL 215

Query: 188 IHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
              +     ++++P +I        E     + S      +       LK+     + + 
Sbjct: 216 EDINEIPAPRMFWPREIWAKYVSKLEDLKEEEWSKEAVQCLNEMVTNALKHANDCLKYLS 275

Query: 245 YI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            +          IP  +    L+    +  ++        +
Sbjct: 276 DLRDPAIFRFCAIPQIMAIGTLER-CYNNIEVFRGVVKIRR 315


>gi|260506054|gb|ACX42423.1| squalene synthase [Bupleurum chinense]
          Length = 414

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/280 (10%), Positives = 77/280 (27%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--RNPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D     + +   + ++
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILME 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I+ SS              +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYNSSWHFSCGTKEYKILMDEFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  +    G+      +I     
Sbjct: 157 KEVESIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +    +     IP  +    L     +  ++        +
Sbjct: 277 LRDPANFRFCAIPQIMAIGTLS-LCFNNIQVFRGVVKMRR 315


>gi|322501622|emb|CBZ36703.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 414

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 84/314 (26%), Gaps = 22/314 (7%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTE 59
           M +K+  ++ + +      D  F    + D+     +    L+    R ++   Y     
Sbjct: 11  MRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDAICIFYLVLRA 70

Query: 60  LMRVRDTARNP-ITRDMRLQWWKDIFESSTKGLIA---------ESISP-FSVELLSIVR 108
           L  + D    P   +   L  +       +  +               P  S     + +
Sbjct: 71  LDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLEKYPCVSRAFKKLKK 130

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERY 163
            Y        + +     +     +     +  Y   ++  +        A    +    
Sbjct: 131 GYQDVIANICERMANGMCEFLKRPVVTKDDYNEYCHYVAGLVGHGLTQLFARCGFEDPSL 190

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRI 221
              L    + G+      +I            ++++P +I G    + +   S  N+   
Sbjct: 191 DDDLTSSNHMGLFLQKTNIIRDYYEDIREEPPRMFWPKEIWGTYVTELKELKSESNNAAA 250

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L ++    + +  +          IP  +  + LK   N+         
Sbjct: 251 VQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNP-DTFQVKV 309

Query: 280 TPNQLVRPWYMLSS 293
             ++      ML +
Sbjct: 310 KVSRPESCRIMLKA 323


>gi|322824037|gb|EFZ29580.1| farnesyltransferase, putative [Trypanosoma cruzi]
          Length = 404

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 77/286 (26%), Gaps = 21/286 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMR 76
             D  F    L+ +     +  +      R ++   Y     L  V D    PI  +   
Sbjct: 28  DEDLRFCYDILQAVSRSFAIVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPIDFKLRE 87

Query: 77  LQWWKDIFESSTKGLIA----------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           L  + +    +T  +            E  +  +     + + Y        + +     
Sbjct: 88  LPKFHEHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMC 147

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQ 181
           D     +     ++ Y   ++  + H  T++  S                + G+      
Sbjct: 148 DFLTRKVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRIADDLTNANHMGLFLQKTN 207

Query: 182 LICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
           +I            ++++P +I      D  +F    +  +    +       L ++   
Sbjct: 208 IIRDFYEDIREVPPRVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVADALVHVPHV 267

Query: 240 REEMRYILPDVFPAF--IPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            E +  +       F  IP  +  + L     +   +        +
Sbjct: 268 VEYLASLRDPSVFTFSAIPQVMAMATLS-LVFNNKDVFHTKVKTTR 312


>gi|115922522|ref|XP_001179262.1| PREDICTED: similar to LOC569692 protein [Strongylocentrotus
           purpuratus]
          Length = 149

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 53/133 (39%)

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                + G +Q I  LI  +P+   R  +  P+++     L +E  + G     +     
Sbjct: 17  DHAASHIGKSQGIVNLIRGIPLLAQRRDVLIPMELTIKYDLSQEDIIRGNRCQDMKDMTF 76

Query: 227 IFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
             A L   +L  ARE  + + P   PAF+  +  ES LK  Q   F +   S +    + 
Sbjct: 77  ELASLANSHLIHARELKKDVTPGAIPAFLATAPLESYLKRIQRADFDVFHRSLSNRYPLL 136

Query: 287 PWYMLSSSIKKRF 299
           P  +   + +K +
Sbjct: 137 PAKIWLQNFRKTY 149


>gi|19112155|ref|NP_595363.1| squalene synthase Erg9 [Schizosaccharomyces pombe 972h-]
 gi|544251|sp|P36596|FDFT_SCHPO RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|295669|gb|AAA35343.1| squalene synthetase [Schizosaccharomyces pombe]
 gi|4160341|emb|CAA22809.1| squalene synthase Erg9 [Schizosaccharomyces pombe]
          Length = 460

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/308 (9%), Positives = 79/308 (25%), Gaps = 27/308 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
           +  E++   ++     + L        +     P   R ++   Y     L  V D    
Sbjct: 24  SYGEDENVPQNIRRCYQLLDMTSRSFAVVIKELPNGIREAVMIFYLVLRGLDTVEDDMTL 83

Query: 70  PITRDM-RLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQY-------------- 110
           P+ + +  L+ +    E            E      VE   ++++Y              
Sbjct: 84  PLDKKLPILRDFYKTIEVEGWTFNESGPNEKDRQLLVEFDVVIKEYLNLSEGYRNVISNI 143

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI 170
                  +    +    +   S+   + F  Y   ++  +    + +    +        
Sbjct: 144 TKEMGDGMAYYASLAEKNDGFSVETIEDFNKYCHYVAGLVGIGLSRLFAQSKLEDPDLAH 203

Query: 171 K-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
                   G+      +I      +   + ++P +I               NS++    +
Sbjct: 204 SQAISNSLGLFLQKVNIIRDYREDFDDNRHFWPREIWSKYTSSFGDLCLPDNSEKALECL 263

Query: 226 KIFAELGLKYLFKAREEMRYILPD--VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +   A   +  +          IP  +  + L     +   +   +    +
Sbjct: 264 SDMTANALTHATDALVYLSQLKTQEIFNFCAIPQVMAIATLAAVFRNP-DVFQTNVKIRK 322

Query: 284 LVRPWYML 291
                 +L
Sbjct: 323 GQAVQIIL 330


>gi|297802498|ref|XP_002869133.1| hypothetical protein ARALYDRAFT_912921 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314969|gb|EFH45392.1| hypothetical protein ARALYDRAFT_912921 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 412

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 20/280 (7%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQWW 80
           F    L  +     L         R ++   Y     L  V D    P      + + + 
Sbjct: 39  FCYSMLHKVSRSFSLVIQQLNTELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFH 98

Query: 81  KDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           + I+ +               +     S   L + + Y    +     + A         
Sbjct: 99  RHIYNTDWHYSCGTNEYKVLMDQFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYA----GIAQFIGQLICQLPI 188
           +     ++ Y   ++  +    + +  +          +      G+      +I     
Sbjct: 159 VETVDDYDEYCHYVAGLVGLGLSKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLE 218

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P +I G      E     +NS +    +       L ++    + M  
Sbjct: 219 DINEIPKSRMFWPREIWGKYADKLEDLKYEENSTKSVQCLNEMVTNALIHIEDCLKYMAA 278

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 279 LRDPSIFRFCAIPQIMAIGTL-ALCYNNVQVFRGVVKLRR 317


>gi|270303610|gb|ACZ71037.1| squalene synthase [Panax ginseng]
          Length = 415

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 77/289 (26%), Gaps = 19/289 (6%)

Query: 13  EEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           E++I S     F    L  +     L      P  R ++   Y     L  V D      
Sbjct: 28  EKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSIST 87

Query: 72  TRD--MRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMI 121
                + + +   I+++               +     S   L +   Y    +     +
Sbjct: 88  EVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMDEFHHVSNAFLDLGSSYKEAIEDITMRM 147

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFI 179
            A         +     ++ Y   ++  +    + +  +      A+  +    G+    
Sbjct: 148 GAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDSLSNSMGLFLQK 207

Query: 180 GQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +I       +   + ++++P  I        E     +NS +    +       L ++
Sbjct: 208 TNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSGKAVQCLNDMVTNALLHV 267

Query: 237 FKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               + M  +          IP  +    L     +  ++        +
Sbjct: 268 EDCLKYMSDLRDPAIFRFCAIPQIMAIGTL-ALCYNNIQVFRGVVKMRR 315


>gi|167826772|ref|ZP_02458243.1| squalene/phytoene synthase [Burkholderia pseudomallei 9]
          Length = 356

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 70/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 20  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 79

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 80  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 139

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 140 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 199

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 200 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 259

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 260 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 317

Query: 285 VR 286
            R
Sbjct: 318 RR 319


>gi|38426488|gb|AAR20329.1| squalene synthase [Artemisia annua]
          Length = 418

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I S+    F    L  +     L      P  R ++   Y     L
Sbjct: 17  LLKLKMAAKKAEKQIPSQPHWAFSYSMLHKVSRSFALVIQQLNPQLRDAVCIFYLVLRAL 76

Query: 61  MRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQY 110
             V D        +   L  +     +                +     S   L + R Y
Sbjct: 77  DTVEDDTSIAADIKVPILIAFHKHIYNRDWHFACGTKEYKVLMDQFHHVSTAFLELKRGY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  S       S  
Sbjct: 137 QEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSKLFHSSGTEILFSDS 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P +I        E     +NS++    +
Sbjct: 197 ISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKYEENSEKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L ++    + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKLRR 315


>gi|167584530|ref|ZP_02376918.1| Squalene/phytoene synthase [Burkholderia ubonensis Bu]
          Length = 354

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 44/303 (14%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKD-- 82
             L+++    YL   + P   R  +   Y        + DTA   P  R   L   ++  
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDRRAALLTQLRENI 72

Query: 83  -----------IFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        E  T+             +  ++     Q    +     ++      
Sbjct: 73  ERLDDGVALSQALEDVTRMQTDSHEHVLLGSMQPMLALLRMQSTADSAAIRKVVATLTSG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             ++   +  + Y + ++  +    T +      +A    +    
Sbjct: 133 MEFDLRTFPDEQAGQVAALPSRELLDRYTYLVAGCVGEFWTDMTGMHTRAARRWDLPDMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P ++L A GL     L+   S R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLRIGRCYLPQEVLDAHGLRVPDLLAPDASQRARGVLFD 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
              + L     A      I             P+ I    L+     G         P +
Sbjct: 253 LLRVALAQYRDACLYTVAIPRRFVRLRLACLWPILIGLETLELL--AGHDAWLDPARPAK 310

Query: 284 LVR 286
           + R
Sbjct: 311 VTR 313


>gi|146095591|ref|XP_001467618.1| farnesyltransferase [Leishmania infantum JPCM5]
 gi|134071983|emb|CAM70682.1| putative farnesyltransferase [Leishmania infantum JPCM5]
          Length = 414

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 84/314 (26%), Gaps = 22/314 (7%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTE 59
           M +K+  ++ + +      D  F    + D+     +    L+    R ++   Y     
Sbjct: 11  MRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDAICIFYLVLRA 70

Query: 60  LMRVRDTARNP-ITRDMRLQWWKDIFESSTKGLIA---------ESISP-FSVELLSIVR 108
           L  + D    P   +   L  +       +  +               P  S     + +
Sbjct: 71  LDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLEKYPCVSRAFKKLKK 130

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERY 163
            Y        + +     +     +     +  Y   ++  +        A    +    
Sbjct: 131 GYQDVIANICERMANGMCEFLKRPVVTKDDYNEYCHYVAGLVGHGLTQLFARCGFEDPSL 190

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRI 221
              L    + G+      +I            ++++P +I G    + +   S  N+   
Sbjct: 191 DDDLTSSNHMGLFLQKTNIIRDYYEDIREEPPRMFWPKEIWGTYVTELKELKSESNNAAA 250

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L ++    + +  +          IP  +  + LK   N+         
Sbjct: 251 VQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNP-DTFQVKV 309

Query: 280 TPNQLVRPWYMLSS 293
             ++      ML +
Sbjct: 310 KVSRPESCRIMLKA 323


>gi|6002565|gb|AAF00038.1| squalene synthase [Mus musculus]
          Length = 368

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  V D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAICVFYLVLRALDTVEDDMSI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+          + E     S+E  ++  +Y         
Sbjct: 89  SVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIDDICH 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  +  +   + ++ Y   ++  +    + +  +  +   +           G
Sbjct: 149 QMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDIECANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++ G      E F   +N D     +       L+
Sbjct: 209 LFLQKTNIIRDYLEDQQEGRKFWPQEVWGRYIKKLEDFAKPENVDVAVQCLNELITNTLQ 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVLTYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|296205388|ref|XP_002749744.1| PREDICTED: squalene synthetase-like isoform 1 [Callithrix jacchus]
          Length = 417

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 77/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S         L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCFTYLNQTSRSFAAVSQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQW----------WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L +          W+          + E     S+E  ++  +Y +       
Sbjct: 89  SVEKKVPLLYNFHSFLYQTDWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQMVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  N  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLNKHVTSEQEWDKYCHYVAGLVGIGLSSLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N +     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQEGREFWPQEVWSRYVKKLGDFAKPENIELAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFRGVVKIRKGQ 320


>gi|71408865|ref|XP_806809.1| farnesyltransferase [Trypanosoma cruzi strain CL Brener]
 gi|70870663|gb|EAN84958.1| farnesyltransferase, putative [Trypanosoma cruzi]
          Length = 404

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 77/286 (26%), Gaps = 21/286 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMR 76
             D  F    L+ +     +  +      R ++   Y     L  V D    P+  +   
Sbjct: 28  DEDLRFCYDILQAVSRSFAVVIMELDEEMRDAVCIFYLVLRALDTVEDDMSIPVDFKLRE 87

Query: 77  LQWWKDIFESSTKGLIA----------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           L  + +    +T  +            E  +  +     + + Y        + +     
Sbjct: 88  LPKFHEHLHDTTWCMSGVGVGRERELLERYTHVTRAYSRLGKAYQDVISGICERMANGMC 147

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQ 181
           D     +     ++ Y   ++  + H  T++  S                + G+      
Sbjct: 148 DFLTRKVETKADYDLYCHYVAGLVGHGLTLLYVSSGLEDVRLADDLTNANHMGLFLQKTN 207

Query: 182 LICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
           +I            ++++P +I      D  +F    +  +    +       L ++   
Sbjct: 208 IIRDFYEDIREVPPRVFWPREIWEKYTDDLHAFKDELHEAKAVECLNAMVADALVHVPHV 267

Query: 240 REEMRYILPDVFPAF--IPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            E +  +       F  IP  +  + L     +   +        +
Sbjct: 268 VEYLASLRDPSVFTFSAIPQVMAMATLS-LVFNNKDVFHTKVKTTR 312


>gi|171321230|ref|ZP_02910198.1| Squalene/phytoene synthase [Burkholderia ambifaria MEX-5]
 gi|171093492|gb|EDT38666.1| Squalene/phytoene synthase [Burkholderia ambifaria MEX-5]
          Length = 354

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 79/312 (25%), Gaps = 42/312 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-------- 77
             L+++    YL   + P   R  +   Y        + DTA     R   L        
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPERRAALLTDLRDEI 72

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        E  T+             +  ++     Q D        ++      
Sbjct: 73  ERLGDGAALSRALEDVTRMQTDSHEHVLLASMKPMLALLRAQPDADRASIRKVVATLTSG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+    + + Y + ++  +    T +  +   +A         
Sbjct: 133 MEFDLRTFPDEQSGQVASLPSRDELDRYTYLVAGCVGEFWTDMTGAHTRAARGWDFADMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L    +     +S   S R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLAEHRIGVADLMSPNASARARGVLVE 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L     A    + I             P+ I    L+    H   +         
Sbjct: 253 LLRATLAQYRDACLYTQAIPRRFVRLRLACLWPIMIGLETLELLAGHDAWLDPARPAKVP 312

Query: 284 LVRPWYMLSSSI 295
             R + +++SS+
Sbjct: 313 RKRVYRIMASSL 324


>gi|148613820|gb|ABQ96265.1| squalene synthase [Psammosilene tunicoides]
          Length = 414

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 74/300 (24%), Gaps = 23/300 (7%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           M +K   K   +E         F    L  +     L         R ++   Y     L
Sbjct: 22  MAIKEAEKQIPQEHH-----WGFCYSMLHKVSRSFALVIQQLGTELRNAVCVFYLVLRAL 76

Query: 61  MRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQY 110
             V D        +   L+ +                      +     S   L + R Y
Sbjct: 77  DTVEDDTSIATEVKVPILRAFHQHIYDRDWHFSCGTKHYKVLMDEFHHVSTAFLELDRGY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV- 169
               +     + A         +     ++ Y   ++  +    + +  +          
Sbjct: 137 QEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHNSGLEDMATDA 196

Query: 170 -IKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
                G+      +I       +   + ++++P +I        E     QNS++    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKLEELKYEQNSEKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L ++  +   M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALLHVEDSLTYMSALRDHAIFRFCAIPQIMAIGTL-ALCYNNIQVFRGVVKMRR 315


>gi|242037729|ref|XP_002466259.1| hypothetical protein SORBIDRAFT_01g004550 [Sorghum bicolor]
 gi|241920113|gb|EER93257.1| hypothetical protein SORBIDRAFT_01g004550 [Sorghum bicolor]
          Length = 403

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 75/274 (27%), Gaps = 18/274 (6%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQWWKDIFE 85
            L+ +     L     PP  R ++   Y     L  V D    P   +   LQ +     
Sbjct: 39  MLQKVSRSFALVIQQLPPQLRNAVCIFYLVLRALDTVEDDTSIPTEVKVPILQEFYRHIY 98

Query: 86  SSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           +                ++    S   L + + Y    +     + A         +   
Sbjct: 99  NRDWHFSCGTNHYRVLMDNFHHVSTAFLELGQGYQKAIEEITRRMGAGMAKFICKEVETV 158

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH--- 191
             ++ Y   ++  + +  + +  +      A   +    G+      +I       +   
Sbjct: 159 DDYDEYCHYVAGLVGYGLSRLFYATGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIP 218

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV- 250
           R ++++P +I        E F   +NS++    +       L +  +  + M  +     
Sbjct: 219 RSRMFWPREIWSKYADKLEDFKYEENSEKAVQCLNDLVTNALIHAEECLQYMSALKGHAI 278

Query: 251 -FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                IP  +          +   +        +
Sbjct: 279 FRFCAIPQIMAIGTC-ALCYNNVHVFRGVVKMRR 311


>gi|38426486|gb|AAR20328.1| squalene synthase [Artemisia annua]
          Length = 413

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I S+    F    L  +     L      P  R ++   Y     L
Sbjct: 16  LLKLKMAAKKAEKQIPSQPHWAFSYSMLHKVSRSFALVIQQLNPQLRDAVCIFYLVLRAL 75

Query: 61  MRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQY 110
             V D        +   L  +     +                +     S   L + R Y
Sbjct: 76  DTVEDDTSIAADIKVPILIAFHKHIYNRDWHFACGTKEYKVLMDQFHHVSTAFLELKRGY 135

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  S       S  
Sbjct: 136 QEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSKLFHSSGTEILFSDS 195

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P +I        E     +NS++    +
Sbjct: 196 ISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKYEENSEKAVQCL 255

Query: 226 KIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L ++    + M  +          IP  +    L     +  ++        +
Sbjct: 256 NDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKLRR 314


>gi|45198962|ref|NP_985991.1| AFR444Cp [Ashbya gossypii ATCC 10895]
 gi|51701405|sp|Q752X9|FDFT_ASHGO RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|44985037|gb|AAS53815.1| AFR444Cp [Ashbya gossypii ATCC 10895]
          Length = 441

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 91/318 (28%), Gaps = 28/318 (8%)

Query: 3   LKFLTKNTR-KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           LKFL +     ++   S +     + L+          +   P  R ++   Y     L 
Sbjct: 20  LKFLREPLYPADDTQGSAELKRCYQLLQRTSRSFAAVIMELHPELRNAVMLFYLILRALD 79

Query: 62  RVRDTAR-NPITRDMRLQWWKDIFESSTKGLIAES----ISPFSVELLSIVRQYDLPNQY 116
            V D    +P  +   L+ +    +  T      +         VE  +I+ ++      
Sbjct: 80  TVEDDMTISPKVKVPLLREFDQKLKLDTWSFDGNAKTEKDRDVLVEFSTILAEFHKLKPE 139

Query: 117 FLDMIEAHFFDSYNDS-------------IFDCKQFEHYAFRISSRLI------HLATMI 157
           +  +I        N               +   + ++ Y   ++  +        +    
Sbjct: 140 YQQVIADITHKMGNGMADYILDEKFNLSGLETIQDYDRYCHYVAGLVGDGLTHLIMLAKF 199

Query: 158 LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQN 217
                Y  S  + +  G+      +I         G+ ++P +I      D  SF   +N
Sbjct: 200 SSPGLYYDSPDLYESMGLFLQKTNIIRDYAEDLADGRSFWPKEIWSHYADDLASFSKPEN 259

Query: 218 SDRISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIV 275
           +      I       L ++      +  +          IP  +  + L        +++
Sbjct: 260 ATAGVYCINHLVLNALGHVQHVLTYLASLREQSSFQFCAIPQVMAIATL-ALVFGNERVL 318

Query: 276 SHSHTPNQLVRPWYMLSS 293
             S    +    + +L S
Sbjct: 319 QTSVKIRKGTTCYLILKS 336


>gi|262090328|gb|ACY25092.1| squalene synthase [Solanum lycopersicum]
          Length = 411

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 72/278 (25%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL----- 77
           F    L+ +     L     P   R ++   Y     L  V D    P    + +     
Sbjct: 39  FCYLMLQKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFH 98

Query: 78  -----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                + W     +    ++ +     S   L + + Y    +     + A         
Sbjct: 99  QHVYDREWHFACGTKEYKVLMDQFHHVSTAFLELGKLYQQAIEDITMRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +      AS  +    G+      +I       
Sbjct: 159 VETTDDYDEYCHYVAGLVGLGLSKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 HRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           +      +++P +I        E     +NS +    +       L ++      M  + 
Sbjct: 219 NEVPKCRMFWPREIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALSHVEDCLTYMFNLH 278

Query: 248 PDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                    IP  +    L        ++        +
Sbjct: 279 DPAIFRFCAIPQVMAIGTL-AMCYDNIEVFRGVVKMRR 315


>gi|71024409|ref|XP_762434.1| hypothetical protein UM06287.1 [Ustilago maydis 521]
 gi|46097683|gb|EAK82916.1| hypothetical protein UM06287.1 [Ustilago maydis 521]
          Length = 690

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/378 (10%), Positives = 92/378 (24%), Gaps = 106/378 (28%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-L 77
           +D    L+ LR        A LL P   R  L  LY F      + D     +    + L
Sbjct: 311 QDLSASLQVLRAASKSFNAASLLLPWDLRTDLGCLYAFCRVADDLVDDHAQELQAKAKNL 370

Query: 78  QWWKDIFESSTKGLIAESIS----PFSVELLSIVR----------------------QYD 111
              +DI ++     I +       P    L  ++                          
Sbjct: 371 DVVRDIVDAVYADSIVDRKQHLSTPIGERLRILLASAALSDKIKQDTRAAATSIAPLTQY 430

Query: 112 LPNQYFLDMIEAHFFDS--------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSER- 162
           +P + + +M++ +  D             +        Y+  ++  +  +   ++     
Sbjct: 431 IPKRLWYEMLQGYSADLRFQHQDARQRTRLQSMDDLVEYSQCVAGVVGEMCIRVILGRCG 490

Query: 163 -------------------------------------YSASLRVIKYAGIAQFIGQLICQ 185
                                                    L   +  G++  +  +   
Sbjct: 491 STVPLDLEVDRKIALRASKTIEQSINVKPLDLNRTADVHTLLYEARRMGVSLQLVNIARD 550

Query: 186 LPIHY-HRGQLYFPLDILGA-------------------------VGLDRESFLSGQNSD 219
           +        + Y P D+                             G + +  +  Q+  
Sbjct: 551 VVPDSVELRRCYLPADMFDKEEDDGMYEALLKGRVALPRHASKLVHGAEEQGVVRPQD-- 608

Query: 220 RISLAIKIFAELGLKYLFKAREEMRYIL-PDVFPAFIPV-SITESVLKHAQNHGFKIVS- 276
            +        E+  +   ++   +R I             S+  ++ K  Q      +S 
Sbjct: 609 -VRKYALRLLEISQRLYDESYPSLRQIPNRPARAGLKAACSVYAAIGKRIQAQTEDEISS 667

Query: 277 -HSHTPNQLVRPWYMLSS 293
                 + L R    +S+
Sbjct: 668 GRRARMSNLDRILRAISA 685


>gi|257481071|gb|ACV60644.1| putative phytoene synthase PSY1 [Daucus carota]
          Length = 172

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 25/100 (25%), Gaps = 3/100 (3%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            + +           +     YL  LL  P  R ++  +Y +      + D         
Sbjct: 76  NLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHIAP 135

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPN 114
             L  W+            +    +   L   V  Y +  
Sbjct: 136 KALDRWEKRLNDLFD---GQPYDMYDAALADTVSTYPVDI 172


>gi|27475614|emb|CAD23250.1| farnesyl-diphosphate farnesyltransferase [Medicago truncatula]
          Length = 413

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/298 (10%), Positives = 80/298 (26%), Gaps = 19/298 (6%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           LK   +N  K+         F    L  +     L      P  R ++   Y     L  
Sbjct: 20  LKIAARNAEKQIPP-EPHWGFCYSMLHKVSRSFGLVIQQLGPELRDAVCIFYLVLRALDT 78

Query: 63  VRDTAR--NPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDL 112
           V D       +   + + + + I+++               +     S   L + + Y  
Sbjct: 79  VEDDTSIETDVKVPILIDFHRHIYDNDWHFGCGTKEYKVLMDQFHHVSKAFLELGKNYQD 138

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVI 170
             +     + A         +     ++ Y   ++  +    + +  +      A+ ++ 
Sbjct: 139 AIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFYASGKEDLATDKLS 198

Query: 171 KYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
              G+      +I       +   + ++++P  I        E     +NS +    +  
Sbjct: 199 NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVSKLEDLKYEENSVKAVQCLND 258

Query: 228 FAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L +     + M  +          IP  +    L     +   +        +
Sbjct: 259 MVTNALLHADDCLQYMSALRDSSNFRFCAIPQVMAIGTL-AMCYNNIGVFRGVVKMRR 315


>gi|4426953|gb|AAD20626.1| squalene synthase [Capsicum annuum]
          Length = 411

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 68/278 (24%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQWWK 81
           F    L+ +     L     P   R ++   Y     L  V D    P   +   L  + 
Sbjct: 39  FCYLMLQKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFH 98

Query: 82  DIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                                +     S   L + + Y    +     + A         
Sbjct: 99  QHIYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKNYQQAIEDITMRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +      AS  +    G+      +I       
Sbjct: 159 VETTDDYDEYCHYVAGLVGLGLSKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 HRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +      +++P +I        E     +NS +    +       L ++      M  + 
Sbjct: 219 NEVPKCRMFWPREIWSKYVNKLEELKYEENSVKAVQCLNDMVTNALSHVEDCLIYMSNLR 278

Query: 247 -LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                    IP  +    L        ++        +
Sbjct: 279 DPAIFRFCAIPQVMAIGTL-AMCYDNIEVFRGVVKMRR 315


>gi|255022196|ref|ZP_05294198.1| squalene synthase [Acidithiobacillus caldus ATCC 51756]
 gi|254968378|gb|EET25938.1| squalene synthase [Acidithiobacillus caldus ATCC 51756]
          Length = 347

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 72/294 (24%), Gaps = 41/294 (13%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +    F  R+L+ +     L     P   R  +   Y        + D      +   R
Sbjct: 6   LAPALAFQERSLQAVSRTFALTIPRLPQGLREPVGNGYLLCRIADTIEDDPELSWSEKAR 65

Query: 77  LQWWKDIFESSTKGLIAESIS--------------------PFSVELLSIVRQYDLPNQY 116
            Q              A +                      P  +++             
Sbjct: 66  WQEAFVAVVQGRAEPDAFARDFAAVLSPQMPAGERELIRNTPLVIQVTRSFNATQQEALA 125

Query: 117 FLDMIEA-----HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY------SA 165
               I           +    + D    + Y + ++  +  + T +            + 
Sbjct: 126 RCVAIMGSGMAKFQEQASRAGLADLAALDSYCYVVAGVVGEMLTTLFIDYEPRLVVREAD 185

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
             R+    G    +  ++      + RG  + P D+L   G+D  +   GQ++     A+
Sbjct: 186 MQRLAVRFGQGLQMTNILKDFWTDWERGVNWLPRDLLARHGVDVAALAPGQDNPAFQHAL 245

Query: 226 KIFAELGLKYLFKAREEMRYILPD-------VFPAFIPVSITESVLKHAQNHGF 272
                +  ++L  A      I  +          A     +    L+       
Sbjct: 246 LELVAIAGRHLDAALRYTLMIPREQTGMRDFCLWAIAMAVL---TLRRIAAQPA 296


>gi|55378258|ref|YP_136108.1| farnesyl-diphosphate farnesyltransferase [Haloarcula marismortui
           ATCC 43049]
 gi|55230983|gb|AAV46402.1| farnesyl-diphosphate farnesyltransferase [Haloarcula marismortui
           ATCC 43049]
          Length = 416

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/305 (9%), Positives = 72/305 (23%), Gaps = 40/305 (13%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
             ++  S D  +    +  +     L            +   Y        + D    P 
Sbjct: 73  HTDRSSSEDIEWCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRVADTIEDAGHLPP 132

Query: 72  TRDMRLQW----------------WKDIFESSTKGLIAESISPFSVE-----LLSIVRQY 110
                L                  + D  E                      +   +  +
Sbjct: 133 AVQTELLQTYSRSLEPSSGTTVSSFHDAVEEWIPTTTNADWEVVENAGRIVDVFHTLDDH 192

Query: 111 --DLPNQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDS-- 160
                     ++++                I    + E Y +  +  +  L T ++    
Sbjct: 193 STQTIRGPVRELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTVGTLVTGLVSHEA 252

Query: 161 --ERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDILGAVGLDRESFLSGQN 217
             E+ +      +   +   +  +             +Y PL++L   GLD        N
Sbjct: 253 TDEQIAQMEENARSFALLLQLVNVAKDAATDMEEENNVYLPLELLHEQGLDHSDVSDTGN 312

Query: 218 SDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-----ITESVLKHAQNHGF 272
            D +   I+   E    YL  A+  +  +  +     +        +    ++  +    
Sbjct: 313 VDSLVPVIEQVTERAEGYLDDAQAWLEAMP-ETRGNTLSAWAIPFLLAVGTIRELRERPA 371

Query: 273 KIVSH 277
            ++  
Sbjct: 372 DVIEQ 376


>gi|223972398|dbj|BAH23428.1| squalene synthetase [Euphorbia tirucalli]
 gi|223972400|dbj|BAH23429.1| squalene synthetase [Euphorbia tirucalli]
          Length = 411

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 78/300 (26%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK    +   E++I ++    F    L  +     L         R ++   Y     L
Sbjct: 17  LLKLKMASKHAEKQIPAQPHWGFCYSMLHKVSRSFALVIQQLGTELRDAVCIFYLVLRAL 76

Query: 61  MRVRDTARNP-ITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQY 110
             V D    P   +   L  +                      +     S   L + + Y
Sbjct: 77  DTVEDDTSIPTDVKVPILIAFHKHIYDREWHFSCGTKDYKVLMDQFHHVSTAFLELGKSY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  +      A   
Sbjct: 137 QEAIENITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFYASGSEDLAPDH 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P  I        E     +NS +    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L ++    + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALIHMDDCLKYMSALRDPAIFRFCGIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|53721267|ref|YP_110252.1| squalene/phytoene synthase [Burkholderia pseudomallei K96243]
 gi|167913529|ref|ZP_02500620.1| squalene/phytoene synthase [Burkholderia pseudomallei 112]
 gi|52211681|emb|CAH37677.1| putative squalene/phytoene synthase [Burkholderia pseudomallei
           K96243]
          Length = 356

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 70/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 20  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 79

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 80  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 139

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 140 EFDLRTFPDESSGRVVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 199

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 200 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 259

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 260 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 317

Query: 285 VR 286
            R
Sbjct: 318 RR 319


>gi|145353033|ref|NP_195191.2| SQS2 (SQUALENE SYNTHASE 2); farnesyl-diphosphate
           farnesyltransferase [Arabidopsis thaliana]
 gi|5678626|emb|CAA18844.2| putative squalene synthase [Arabidopsis thaliana]
 gi|7270415|emb|CAB80182.1| putative squalene synthase [Arabidopsis thaliana]
          Length = 413

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/282 (9%), Positives = 73/282 (25%), Gaps = 20/282 (7%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT--RDMRLQ 78
             F    L  +     L         R ++   Y     L  V D    P+     + + 
Sbjct: 37  LAFCYSILHKVSKSFSLVIQQLGTELRNAVCVFYLILRALDTVEDDTSVPVEIKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDGDWHFSCGTKEYKLLMDQFHHVSAAFLKLEKGYQEAIEDITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS----ASLRVIKYAGIAQFIGQLICQL 186
             +     ++ Y    +  +    + I  +           ++    G+      +I   
Sbjct: 157 KEVETIDDYDEYCHYAAGLVGLGLSKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDY 216

Query: 187 PIHYHRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
               +      +++P +I G      E F + + + +    +       L ++    + +
Sbjct: 217 LEDINERPKSRMFWPREIWGKYVDKLEDFKNEEKATKAVQCLNEMVTNALNHVEDCLKSL 276

Query: 244 RYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             +          IP  +    L     +  ++        +
Sbjct: 277 ASLRDPAIFQSCAIPQIVAIGTL-ALCYNNVQVFRGVVRLRR 317


>gi|1706773|sp|P53798|FDFT_MOUSE RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|511932|dbj|BAA06102.1| squalene synthase [Mus musculus]
 gi|1093943|prf||2105185A squalene synthase
          Length = 416

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  V D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAICVFYLVLRALDTVEDDMSI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+          + E     S+E  ++  +Y         
Sbjct: 89  SVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIDDICH 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  +  +   + ++ Y   ++  +    + +  +  +   +           G
Sbjct: 149 QMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDIECANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++ G      E F   +N D     +       L+
Sbjct: 209 LFLQKTNIIRDYLEDQQEGRKFWPQEVWGRYIKKLEDFAKPENVDVAVQCLNELITNTLQ 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVLTYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|254263333|ref|ZP_04954198.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1710a]
 gi|254214335|gb|EET03720.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 349

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 70/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 13  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 73  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 133 EFDLRTFPDESSGRVVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 253 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|167741208|ref|ZP_02413982.1| squalene/phytoene synthase [Burkholderia pseudomallei 14]
 gi|167818391|ref|ZP_02450071.1| squalene/phytoene synthase [Burkholderia pseudomallei 91]
 gi|167848290|ref|ZP_02473798.1| squalene/phytoene synthase [Burkholderia pseudomallei B7210]
 gi|167896840|ref|ZP_02484242.1| squalene/phytoene synthase [Burkholderia pseudomallei 7894]
 gi|167905226|ref|ZP_02492431.1| squalene/phytoene synthase [Burkholderia pseudomallei NCTC 13177]
 gi|167921467|ref|ZP_02508558.1| squalene/phytoene synthase [Burkholderia pseudomallei BCC215]
          Length = 349

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 70/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 13  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 73  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 133 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 253 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|84686992|ref|ZP_01014875.1| Probable Phytoene/squalene synthetase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664966|gb|EAQ11447.1| Probable Phytoene/squalene synthetase [Rhodobacterales bacterium
           HTCC2654]
          Length = 250

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 86/276 (31%), Gaps = 31/276 (11%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
               +   D DR +A + +P   R  L  LY F+ E+ R     + P+  +MRLQ+W+D+
Sbjct: 6   CAEIVERGDPDRLVAAMSAPVPDREVLFPLYAFNLEIARAPWLTQEPLIAEMRLQFWRDV 65

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            +   +G            L + +    +P      MI+A   D   +          Y 
Sbjct: 66  LDEIEQGKT-PRAHEVVAPLGAAIHARAIPLAPLRAMIDARRADIAREPFVAPADLWDYI 124

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
              +  L+  +   L     +      +  G  Q +   +   P     G   F      
Sbjct: 125 NAGAGSLMFASVAALGRTDEAE----ARVLGRVQGLAAWLEAQPELLAHGWRAFDAG--- 177

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESV 263
                                     ++ L  L   R           PA    S   ++
Sbjct: 178 --------------------FYPEMIDVALADLRSVRGHDF---GKATPAARAASRAGAI 214

Query: 264 LKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           LK A+     I+    + ++  R    L  +++ R+
Sbjct: 215 LKRAKADPDAIIEGRLSESEFARRGRFLWKTLRGRW 250


>gi|295700322|ref|YP_003608215.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1002]
 gi|295439535|gb|ADG18704.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1002]
          Length = 403

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 65/270 (24%), Gaps = 39/270 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKD--- 82
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +D   
Sbjct: 68  LLKGVSRSFYLTLRVLPIGMRDPIGLAYLLARAADTIADTSLIAPGQRLELLLALRDQVN 127

Query: 83  ----------IFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFD 127
                        +   G  A+S     +      L  + +  +        ++      
Sbjct: 128 GVAVESAPFQRIAAEVAGQQAQSDEKLLLESLNPALDVLAQLSESDRHAVRAIVTTLTEG 187

Query: 128 SYN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSERY-------SASL 167
                 +  D             + + Y + ++  +    T +  +              
Sbjct: 188 MEFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHMPGTLKEQPDTMK 247

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
           +     G A  +  ++         G+ Y P  +L    L     L    S R    +  
Sbjct: 248 QRGVRFGKALQMTNVLRDCGKDLRIGRCYLPQSMLERHALSARDLLQPAISIRARPLLIE 307

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPV 257
                L +   A +    I        +  
Sbjct: 308 LLCKTLDHFRAALDYTLAIPASAVRLRLAC 337


>gi|167722215|ref|ZP_02405451.1| squalene/phytoene synthase [Burkholderia pseudomallei DM98]
          Length = 349

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 71/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 13  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 73  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 133 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    + + 
Sbjct: 193 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHVL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 253 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 310

Query: 285 VR 286
            R
Sbjct: 311 RR 312


>gi|115358436|ref|YP_775574.1| squalene/phytoene synthase [Burkholderia ambifaria AMMD]
 gi|115283724|gb|ABI89240.1| farnesyl-diphosphate farnesyltransferase [Burkholderia ambifaria
           AMMD]
          Length = 354

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 79/312 (25%), Gaps = 42/312 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-------- 77
             L+++    YL   + P   R  +   Y        + DTA     R   L        
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPERRAALLTDLRDEI 72

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        E  T+             +  ++     Q D        ++      
Sbjct: 73  ERLGDGAALSRALEDVTRMQTDSHEHMLLASMKPMLALLRAQPDADRASIRKVVATLTSG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+    + + Y + ++  +    T +  +   +A         
Sbjct: 133 MEFDLRTFPDEQSGQVASLPSRDELDRYTYLVAGCVGEFWTDMTGAHTRAARGWDFADMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L    +     +S   S R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLAEHRIGVADLMSPDASARARGVLVE 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L     A    + I             P+ I    L+    H   +         
Sbjct: 253 LLRATLAQYRDACFYTQAIPRRFVRLRLACLWPIMIGLETLELLAGHDAWLDPARPAKVP 312

Query: 284 LVRPWYMLSSSI 295
             R + +++SS+
Sbjct: 313 RKRVYRIMASSL 324


>gi|172063188|ref|YP_001810839.1| squalene/phytoene synthase [Burkholderia ambifaria MC40-6]
 gi|171995705|gb|ACB66623.1| Squalene/phytoene synthase [Burkholderia ambifaria MC40-6]
          Length = 354

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 78/312 (25%), Gaps = 42/312 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-------- 77
             L+++    YL   + P   R  +   Y        + DTA     R   L        
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPERRAALLTDLRDEI 72

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        E  T+             +  ++     Q D        ++      
Sbjct: 73  ERLGDGAALSRALEDVTRMQTDSHEHMLLASMKPMLALLRAQPDADRASIRKVVATLTSG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+    + + Y + ++  +    T +  +   +A         
Sbjct: 133 MEFDLRTFPDEQSGQVASLPSRDELDRYTYLVAGCVGEFWTDMTGAHTRAARGWDFADMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L    +     +S   S R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLAEHRIGVADLMSPDASARARGVLVE 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L     A    + I             P+ I    L     H   +         
Sbjct: 253 LLRTTLAQYRDACFYTQAIPRRFVRLRLACLWPIMIGLETLALLAGHDAWLDPARPAKVP 312

Query: 284 LVRPWYMLSSSI 295
             R + +++SS+
Sbjct: 313 RKRIYRIMASSL 324


>gi|28208268|dbj|BAC56854.1| squalene synthase [Lotus japonicus]
          Length = 413

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/278 (10%), Positives = 70/278 (25%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWK 81
           F    L  +     L         R ++   Y     L  V D        +   L+ + 
Sbjct: 39  FCYSMLHKVSRSFALVIQQLDTDLRNAVCIFYLVLRALDTVEDDTSIATEVKVPILKAFH 98

Query: 82  DIFESSTKGLIAESI---------SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                        +             S   L + + Y    +   D + A         
Sbjct: 99  RHIYDRDWHFSCGTKEYKVLMGQFHLVSTAFLELAKNYQEAIEDITDRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +      A+  +    G+      +I       
Sbjct: 159 VETIDDYDEYCHYVAGLVGLGLSKLFHASGKENLAADSLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 H---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           +   + ++++P  I        E     +NS +    +       L +     + M  + 
Sbjct: 219 NEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMSDLR 278

Query: 248 PDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            D       IP  +    L     +  ++        +
Sbjct: 279 DDSIFRFCAIPQIMAIGTL-AICYNNVEVFRGVVKMRR 315


>gi|217422870|ref|ZP_03454372.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 576]
 gi|217393778|gb|EEC33798.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 576]
          Length = 349

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 67/288 (23%), Gaps = 42/288 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 13  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 72

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 73  GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 132

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 133 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 192

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R+   +   
Sbjct: 193 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPDASLRVRPLMHAL 252

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGF 272
               L +     +    I           F P++I    L    ++  
Sbjct: 253 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDA 300


>gi|66393825|gb|AAY46017.1| squalene synthase [Bupleurum falcatum]
          Length = 415

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 76/280 (27%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--RNPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D     + +   + ++
Sbjct: 37  WAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILME 96

Query: 79  WWKDIFESSTKGLIAESI--------SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I+ +S                    S   L + + Y    +     + A       
Sbjct: 97  FHRHIYNNSWHFSCGTKEYKILMDGFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  +    G+      +I     
Sbjct: 157 KEVESIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +    +     IP  +    L     +  ++        +
Sbjct: 277 LRDPANFRFCAIPQIMAIGTLS-LCFNNIQVFRGVVKMRR 315


>gi|34328173|ref|NP_034321.2| squalene synthase [Mus musculus]
 gi|26345014|dbj|BAC36156.1| unnamed protein product [Mus musculus]
 gi|32493325|gb|AAH54722.1| Farnesyl diphosphate farnesyl transferase 1 [Mus musculus]
 gi|74142018|dbj|BAE41072.1| unnamed protein product [Mus musculus]
 gi|74145098|dbj|BAE27418.1| unnamed protein product [Mus musculus]
 gi|74177389|dbj|BAE34590.1| unnamed protein product [Mus musculus]
 gi|74219800|dbj|BAE40489.1| unnamed protein product [Mus musculus]
 gi|148704122|gb|EDL36069.1| farnesyl diphosphate farnesyl transferase 1 [Mus musculus]
 gi|187951003|gb|AAI38302.1| Farnesyl diphosphate farnesyl transferase 1 [Mus musculus]
 gi|187952867|gb|AAI38303.1| Farnesyl diphosphate farnesyl transferase 1 [Mus musculus]
          Length = 416

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  V D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAICVFYLVLRALDTVEDDMSI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+          + E     S+E  ++  +Y         
Sbjct: 89  SVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIDDICH 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  +  +   + ++ Y   ++  +    + +  +  +   +           G
Sbjct: 149 RMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDIECANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++ G      E F   +N D     +       L+
Sbjct: 209 LFLQKTNIIRDYLEDQQEGRKFWPQEVWGRYIKKLEDFAKPENVDVAVQCLNELITNTLQ 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVLTYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|62945917|gb|AAY22201.1| squalene synthase [Datura inoxia]
          Length = 387

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 71/278 (25%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL----- 77
           F    L  +     L     P   R ++   Y     L  V D    P    + +     
Sbjct: 16  FCYLMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFH 75

Query: 78  -----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                + W     +    ++ +     S   L + + Y    +     + A         
Sbjct: 76  QHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKHYQQAIEDITMRMGAGMAKFICKE 135

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +      AS  +    G+      +I       
Sbjct: 136 VETTNDYDEYCHYVAGLVGLGLSKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDI 195

Query: 191 HRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +      +++P +I        E     +NS +    +       L ++      M  + 
Sbjct: 196 NEVPKCRMFWPREIWSKYVNKLEELKYEENSVKAVQCLNDMVTNALSHVEDCLTYMSNLR 255

Query: 247 -LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                    IP  +    L        ++        +
Sbjct: 256 DPAIFRFCAIPQVMAIGTL-AMCYDNIEVFRGVVKMRR 292


>gi|260506056|gb|ACX42424.1| squalene synthase [Bupleurum chinense]
          Length = 415

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 72/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L      P  R ++   Y     L  V D    +   +   L  
Sbjct: 37  WAFCYSMLHKVSRSFCLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISSEVKVPILME 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +     +++              +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYNNSWHFSCGTKEYKILMDEFHHVSNAFLELGKGYQEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A+  +    GI      +I     
Sbjct: 157 QEVESIDDYDEYCHHVAGLVGLGMSKLFHALGAEDLATDALSNSMGIFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRIFWPRQIWSKYVDKLEDLKYEENSAKAVQCLNDMVTNALIHAEDCLKYMSD 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +    +     I   +    L     +  ++        +
Sbjct: 277 LRDPGNFRFCAISQIMAIGTLS-LCFNNIQVFRGVVKMRR 315


>gi|9955387|dbj|BAB12207.1| squalene synthase [Candida glabrata]
          Length = 443

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 77/291 (26%), Gaps = 29/291 (9%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
                  L           +   P  R  +   Y     L  V D    +P  +   L+ 
Sbjct: 39  LERCYELLNLTSRSFAAVIMELHPELRNVIMVFYLILRALDTVEDDMTIDPQLKVKVLRE 98

Query: 80  WKDIFESSTKGLIA----ESISPFSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           +    +++          E       E   I+ +Y      +  +I              
Sbjct: 99  FDSKLDTTDWSFDGNDLKEKDRVVLTEFPCILGEYHKLKPEYQKVIKRITGLMGNGMADY 158

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI--------KYAG 174
             +++         K ++ Y   ++  +    T ++    + +             +  G
Sbjct: 159 ILDENFNLNGVQTVKDYDKYCHYVAGLVGDGLTELIVLAGFGSDDLYHGKNSFQLYESLG 218

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P +I          F   +N+ +    I       L 
Sbjct: 219 LFLQKTNIIRDYAEDLDDGRSFWPKEIWSEYATKLTDFRDPKNTQKGVDCINHLVLNALT 278

Query: 235 YLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           ++      +  I          IP  +  + L    N+  +++  +    +
Sbjct: 279 HVIDVLTYLSSIHEQSSFQFCAIPQVMAIATLAKVFNNP-EVLRKNVKIRK 328


>gi|94481234|dbj|BAE94034.1| phytoene synthase [Diospyros kaki]
          Length = 140

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 45/130 (34%), Gaps = 5/130 (3%)

Query: 135 DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           +  +   Y + ++  +  ++  ++           +        GIA  +  ++  +   
Sbjct: 11  NFDELYLYCYYVAGTVGLMSVPVMGIAPESQATTESVYNAALALGIANQLTNILRDVGED 70

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E   +G+ +D+    +K        +  +A + +  +   
Sbjct: 71  ARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRSFMKNQINRARMFFNEAEKGVTELSAA 130

Query: 250 VFPAFIPVSI 259
                    +
Sbjct: 131 SRWPVWASLL 140


>gi|206570687|gb|ACI12954.1| phytoene synthase [Manihot esculenta]
          Length = 98

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 37/98 (37%), Gaps = 1/98 (1%)

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +     RG++Y P D L   GL  +   +G+ +D+    +K   +    +  +A + +
Sbjct: 1   RDVGEDARRGRIYLPQDELAQAGLSDDDIFAGKVTDKWRNFMKNQIKRARMFFNEAEKGV 60

Query: 244 RYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHT 280
             +      P +  + +   +L   + + +   +    
Sbjct: 61  TELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAY 98


>gi|5360655|dbj|BAA82093.1| squalene synthase [Solanum tuberosum]
          Length = 411

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 72/278 (25%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL----- 77
           F    L+ +     L     P   R ++   Y     L  V D    P    + +     
Sbjct: 39  FCYLMLQKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFH 98

Query: 78  -----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                + W     +    ++ +     S   L + + Y    +     + A         
Sbjct: 99  QHVYDREWHFACGTKEYKVLMDQFHHVSTAFLELGKLYQQAIEDITMRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +      AS  +    G+      +I       
Sbjct: 159 VETTDDYDEYCHYVAGLVGLGLSKLFHASGTEDLASDSLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 HRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +      +++P +I        E     +NS +    +       L ++      M  + 
Sbjct: 219 NEVPKCRMFWPREIWSKYVNKLEDLKYEENSVKAVQCLNEMVTNALSHVEDCLTYMFNLR 278

Query: 247 -LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                    IP  +    L        ++        +
Sbjct: 279 DPSIFRFCAIPQVMAIGTL-AMCYDNIEVFRGVVKMRR 315


>gi|323528874|ref|YP_004231026.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1001]
 gi|323385876|gb|ADX57966.1| Squalene/phytoene synthase [Burkholderia sp. CCGE1001]
          Length = 348

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/270 (11%), Positives = 69/270 (25%), Gaps = 39/270 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--------------RNPIT 72
            L+ +    YL   + P   R  +   Y        + DT+              R+ + 
Sbjct: 13  LLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPGQRLQLLLSLRDQVN 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFD 127
                        +   G  ++S     +      L  + +  +   +   +++      
Sbjct: 73  GVASDGALFQRMAAEVAGQQSQSDEKVLLESLGPALQVLAQLSESDRKAVREIVSTLTEG 132

Query: 128 SYN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSERY-------SASL 167
                 +  D             + + Y + ++  +    T +  +              
Sbjct: 133 MEFDLRTFPDERSGRIAALREYGELDRYTYLVAGCVGEFWTAMTYAHMPGTLKERPDIMA 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P  +L   GL  +  L   NS R    +  
Sbjct: 193 TRGVRFGKALQMTNVLRDCGRDLRIGRCYLPQSMLEQHGLSPQDLLLPANSLRARPLMIE 252

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPV 257
                L +  +A +    I        +  
Sbjct: 253 LLRNTLDHFREALDYTLAIPALSVRLRLAC 282


>gi|254787172|ref|YP_003074601.1| phytoene/squalene synthetase family protein [Teredinibacter
           turnerae T7901]
 gi|237686700|gb|ACR13964.1| phytoene/squalene synthetase family protein [Teredinibacter
           turnerae T7901]
          Length = 375

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/297 (9%), Positives = 72/297 (24%), Gaps = 34/297 (11%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--------- 77
            L  +     L     P    ++++  Y        + D           L         
Sbjct: 32  MLPQVSRSFALTIPQLPEFLCLAVTNAYLLCRIADTLEDDPEISADATRDLYGFFIAALE 91

Query: 78  -------------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
                               +   + L+A++     + L       ++       M    
Sbjct: 92  GKAPPATFCRLASAALSLQTDPVERDLVADADQVIRIFLALPTTTQNIIATCVKKMCAGM 151

Query: 125 --FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------YAGIA 176
             +    +  +    + + Y + ++  +  + T +        +L+  +        G  
Sbjct: 152 PDYQPGAHRGLESLAELDAYCYFVAGVVGEMLTGLFCDFAEDIALQRDRLDKLSTSFGQG 211

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +  +I  +     RG  + P DI GA G + +      N+            +   +L
Sbjct: 212 LQMTNIIKDVWDDLERGFCWLPRDIYGAGGFNLDELAPNHNTALFRNCQGQLISIAHGHL 271

Query: 237 FKAREEMRYILPDVFP----AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
             A +    I              V +    L+            +   ++      
Sbjct: 272 QNALDYSLCIPARHKGIRIFCLWAVGLALPTLQKVFTSSAYYHGKTVKMSRARMLLI 328


>gi|145346006|ref|XP_001417488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577715|gb|ABO95781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 456

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/295 (9%), Positives = 79/295 (26%), Gaps = 21/295 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-- 75
             D  +    L  +     +         R ++   Y     L  V D    PI R +  
Sbjct: 33  DPDLAYCYDVLNKVSRSFAIVIQRLDAELRDAVCVFYLVLRALDTVEDDMSIPIERKVPD 92

Query: 76  RLQWWKDIFESST-KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---- 130
            L + + I++++       +           +   +    + +  +I        +    
Sbjct: 93  LLAFHEYIYDANYSADCGEKHYKDLMKNYPRVTSVFLGLKKEYRTVIADITKRMGHGMAK 152

Query: 131 ---DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQL 182
                + D   F+ Y   ++  +    + +    +  ++  V +       G+      +
Sbjct: 153 FIEKEVMDMADFDEYCHYVAGLVGIGLSNLWGVSKMESAEFVGEEKLSNAMGLFLQKTNI 212

Query: 183 ICQLPIHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
           I             ++++P  +      + +     +N ++    +       L +    
Sbjct: 213 IRDYLEDIQELPAPRMFWPRSVWSKYAEELDDLQHEENREKAVQCMNELITNALSHSLDC 272

Query: 240 REEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
            + M  +          IP  +  + L         +        + +    ML 
Sbjct: 273 LKYMSRVKEISIFRFCAIPQVMAIATLAE-CYGNENVFKGVVKIRRGLSARIMLK 326


>gi|170702609|ref|ZP_02893480.1| Squalene/phytoene synthase [Burkholderia ambifaria IOP40-10]
 gi|170132479|gb|EDT00936.1| Squalene/phytoene synthase [Burkholderia ambifaria IOP40-10]
          Length = 354

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 80/312 (25%), Gaps = 42/312 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-------- 77
             L+++    YL   + P   R  +   Y        + DTA     R   L        
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPERRAALLTDLRDEI 72

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        E  T+             +  ++     Q D        ++      
Sbjct: 73  ERLGDGAALSRALEDVTRMQTDSHEHMLLASMKPMLALLRAQPDADRASIRKVVATLTSG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+    + + Y + ++  +    T +  +   +A         
Sbjct: 133 MEFDLRTFPDEQSGQVASLPSRDELDRYTYLVAGCVGEFWTDMTGAHTRAARGWDFADMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L A  +     +S   S R    +  
Sbjct: 193 EKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLAAHRIGVADLMSPDASARARGVLVE 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L     A    + I             P+ I    L+    H   +         
Sbjct: 253 LLRATLAQYRDACFYTQAIPRRFVRLRLACLWPIMIGLETLELLAGHDAWLDPARPAKVP 312

Query: 284 LVRPWYMLSSSI 295
             R + +++SS+
Sbjct: 313 RKRIYRIMASSL 324


>gi|154342744|ref|XP_001567320.1| farnesyltransferase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064649|emb|CAM42751.1| putative farnesyltransferase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 414

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/314 (10%), Positives = 84/314 (26%), Gaps = 22/314 (7%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRY-LACLLSPPLYRISLSFLYYFHTE 59
           M +K+  ++ + +      D  F    + D+      +   L+    R ++   Y     
Sbjct: 11  MRVKWQMRSVKLQVPPEEADLRFCYEVMDDVSRSFAAVVAQLADQQLRDAICIFYLVLRA 70

Query: 60  LMRVRDTARNP-ITRDMRLQWWKDIFESSTKGLIA---------ESISP-FSVELLSIVR 108
           L  + D    P   +   +  +      +   +               P  + E   + +
Sbjct: 71  LDTLEDDMSVPVNVKLKEMPKFHTRMSDTNWSMTGVGEGRERELLEKYPCVAREFKKLRK 130

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERY 163
           +Y        + +     +     +     +  Y   ++  +        A    +    
Sbjct: 131 EYQDVIANICERVANGMCEFLQRPVVTLDDYNLYCHYVAGLVGHGLTHLFARCGFEDSHL 190

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHY--HRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
              L    + G+      +I            ++++P DI      + +      NS   
Sbjct: 191 DEDLTNSNHMGLFLQKTNIIRDYYEDICDEPPRMFWPKDIWSLYATELKDLKKESNSAAA 250

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L ++    + +  +          IP  +  + LK   N+         
Sbjct: 251 VQCLNAMVADALVHVPYVVDYLSTLQDPSVFRFCAIPQVMAIATLKEVYNNP-DTFHVKV 309

Query: 280 TPNQLVRPWYMLSS 293
             ++      ML +
Sbjct: 310 KVSRPESCRIMLKT 323


>gi|2463569|dbj|BAA22559.1| squalene synthase [Glycine max]
          Length = 413

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/298 (10%), Positives = 73/298 (24%), Gaps = 19/298 (6%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           LK   +N  K+         F    L  +     L         R ++   Y     L  
Sbjct: 20  LKMAARNAEKQIPP-EPHWAFCYTMLHKVSRSFALVIQQLGIELRNAVCIFYLVLRALDT 78

Query: 63  VRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDL 112
           V D        +   L  +                      +     S   L + + Y  
Sbjct: 79  VEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNYQE 138

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVI 170
             +     + A         +     ++ Y   ++  +    + +  +      A   + 
Sbjct: 139 AIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGSEDLAPDDLS 198

Query: 171 KYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
              G+      +I       +   + ++++P  I        E     +NS +    +  
Sbjct: 199 NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKLEDLKYEENSVKAVQCLND 258

Query: 228 FAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L +     + M  +   P      IP  +    L     +  ++        +
Sbjct: 259 MVTNALMHPEDCLKYMAALRDPPIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|156845487|ref|XP_001645634.1| hypothetical protein Kpol_541p19 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116300|gb|EDO17776.1| hypothetical protein Kpol_541p19 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 447

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 83/304 (27%), Gaps = 31/304 (10%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
           S+D       L+              P  R ++   Y     L  + D    NP  +   
Sbjct: 38  SKDLKRCYELLKLTSRSFAAVIQELNPELRDAIMIFYLVLRALDTIEDDMTINPSVKVKL 97

Query: 77  LQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           L  + +  +            E      V+   I+R+Y      +  +I+          
Sbjct: 98  LNEFDEKLDLDDWSFDGNGPNEKDRDVLVDFPYILREYHNLKPEYQKVIKEITRKMGQGM 157

Query: 133 -------------IFDCKQFEHYAFRISSRLIHLATMILDSERY--------SASLRVIK 171
                        +   K ++ Y   ++  +    T ++    +        S    + +
Sbjct: 158 VNYVLDESFNLNGVETIKDYDLYCHYVAGLVGDGLTQLIVLAGFGDENLYEASGDRELYE 217

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G+      +I         G+ ++P +I              +++  +   I      
Sbjct: 218 SMGLFLQKTNIIRDYAEDLEDGRSFWPKEIWSLYVEKLPDLQKDKSN-GLR-CINHLVLN 275

Query: 232 GLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
            L ++      +  I          IP  +  + L     +  K++  +    +    + 
Sbjct: 276 ALTHVNDVLTYLASINEQSTFQFCSIPQVMAIATLSLLF-NNEKVLVENVKIRKGETCYL 334

Query: 290 MLSS 293
           +L S
Sbjct: 335 ILKS 338


>gi|225020640|ref|ZP_03709832.1| hypothetical protein CORMATOL_00647 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946586|gb|EEG27795.1| hypothetical protein CORMATOL_00647 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 289

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/285 (8%), Positives = 59/285 (20%), Gaps = 34/285 (11%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRD 74
                 + +        LA  +     R  +  LY        + D        +     
Sbjct: 2   AFRAARQVISSYSTSFGLATRMLGKQQRTDIRNLYAMVRIADEIVDGTTKAAGFDIPATT 61

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L+ ++         L      P         R+     ++      +   D       
Sbjct: 62  ALLEEYERQV--LAAPLRRFHPDPILHAYAITARRCKFDPEHIRAFFASMRTDLQKSMH- 118

Query: 135 DCKQFEHYAFRISSRLIHLATMIL------DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           +   ++ Y +  +  +  L   +       ++ R +      +  G A      +     
Sbjct: 119 NAASYKSYIYGSAEVIGLLCVSVFLAGRKVETWRRARMATGAQALGAAFQKINFLRDYAE 178

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            +      +    L                       K         L  A   +  + P
Sbjct: 179 DHATLGRQYFTLELTE------------------ATKKALIADIRTDLATAETAIGLLPP 220

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYML 291
                  +       +     +   + I +     +   R   + 
Sbjct: 221 SSRTGVQLATQFFTKLTNQLDHTDTRTIRNTRVRLSPTTRARIIA 265


>gi|330993361|ref|ZP_08317296.1| hypothetical protein SXCC_03259 [Gluconacetobacter sp. SXCC-1]
 gi|329759391|gb|EGG75900.1| hypothetical protein SXCC_03259 [Gluconacetobacter sp. SXCC-1]
          Length = 290

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 86/244 (35%), Gaps = 15/244 (6%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV-----RDTARNPITRDMRLQWWKDI 83
           R  D DR+   L  P   R +   L  F+ E  R        +   P+   +RLQWW+D+
Sbjct: 29  RKADPDRFFCALFLPAAARHAAMVLIAFNHECTRALALPASWSVAGPMAGLIRLQWWRDV 88

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            E      +       +  +L ++ +  +     + MIEA   +                
Sbjct: 89  LEGGNARRVE-----LAASVLDLLARGAVRRGTLVAMIEARECELEG-LPDSAAWQASML 142

Query: 144 FRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILG 203
                  + +A         +  L  ++  G    +G L+  LP     G+   P D L 
Sbjct: 143 DGAGG--MQVAMAQAAGIADAGVLARVRLLGGVYGVGALVRYLPAVLAAGRCPLPDDALA 200

Query: 204 AVGLDRESFLSGQNSD-RISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES 262
             GL R+   +G+ +  +I+    +  + G  +L +AR     +      A +P  +   
Sbjct: 201 MAGLTRDGLRTGRPTPTQIAALRAMLRQQGRDWLDRARAG-GRLPRPALAASLPAVLGLR 259

Query: 263 VLKH 266
            ++ 
Sbjct: 260 DMRE 263


>gi|50294490|ref|XP_449656.1| hypothetical protein [Candida glabrata CBS 138]
 gi|51704336|sp|Q9HGZ6|FDFT_CANGA RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|49528970|emb|CAG62632.1| unnamed protein product [Candida glabrata]
          Length = 443

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 77/291 (26%), Gaps = 29/291 (9%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
                  L           +   P  R  +   Y     L  V D    +P  +   L+ 
Sbjct: 39  LERCYELLNLTSRSFAAVIMELHPELRNVIMVFYLILRALDTVEDDMTIDPQLKVKVLRE 98

Query: 80  WKDIFESSTKGLIA----ESISPFSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           +    +++          E       E   I+ +Y      +  +I              
Sbjct: 99  FDSKLDTTDWSFDGNDLKEKDRVVLTEFPCILGEYHKLKPEYQKVIKRITGLMGNGMADY 158

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI--------KYAG 174
             +++         K ++ Y   ++  +    T ++    + +             +  G
Sbjct: 159 ILDENFNLNGVQTVKDYDKYCHYVAGLVGDGLTELIVLAGFGSDDLYHGKNSFQLYESMG 218

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P +I          F   +N+ +    I       L 
Sbjct: 219 LFLQKTNIIRDYAEDLDDGRSFWPKEIWSEYATKLTDFRDPKNTQKGVDCINHLVLNALT 278

Query: 235 YLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           ++      +  I          IP  +  + L    N+  +++  +    +
Sbjct: 279 HVIDVLTYLSSIHEQSSFQFCAIPQVMAIATLAKVFNNP-EVLRKNVKIRK 328


>gi|322494059|emb|CBZ29355.1| putative farnesyltransferase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 414

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 78/297 (26%), Gaps = 22/297 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDM 75
             D  F    + D+     +    LS    R S+   Y     L  + D    P   +  
Sbjct: 28  ETDLRFCYDIMNDVSRSFAVVVAQLSDQQLRDSICIFYLVLRALDTLEDDMSVPVDVKLK 87

Query: 76  RLQWWKDIFESSTKGLIA---------ESISP-FSVELLSIVRQYDLPNQYFLDMIEAHF 125
            L  +       +  +               P  S E   + ++Y        + +    
Sbjct: 88  ELPKFHTHTSDMSWCMSGVGEGRERELLEKYPCVSREFQKLKKEYQDVIANICERMANGM 147

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQFIG 180
            +     +     +  Y   ++  +        A    +       L    + G+     
Sbjct: 148 CEFLKRPVVTKDDYNQYCHYVAGLVGHGLTQLFARCDFEDPSLDDDLTTSNHMGLFLQKT 207

Query: 181 QLICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
            +I            ++++P +I G    + +   S  N+      +       L ++  
Sbjct: 208 NIIRDYYEDIREEPPRMFWPKEIWGTYVTELKELKSESNNPAAVQCLNAMVADALVHVPY 267

Query: 239 AREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             + +  +          IP  +  + LK   N+           ++      ML +
Sbjct: 268 IVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNP-DTFQVKVKVSRPESCRIMLKA 323


>gi|323359580|ref|YP_004225976.1| phytoene/squalene synthetase [Microbacterium testaceum StLB037]
 gi|323275951|dbj|BAJ76096.1| phytoene/squalene synthetase [Microbacterium testaceum StLB037]
          Length = 289

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/284 (10%), Positives = 65/284 (22%), Gaps = 32/284 (11%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA-RNPITRDMRLQWWKDI 83
              +        LA  L     R  +  +Y        + D    +      R +   + 
Sbjct: 20  AAVIHRYSTSFGLAARLLGARPRPHVRNIYALVRVADEIVDGPAHDAGLTPERERAVLNA 79

Query: 84  FES--STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
            E+          S +          R+  +          +   D       D    + 
Sbjct: 80  LENEVMDAIATGFSANLVVHAFARTARECGIDADLIAPFFASMRTDIDTAEHDDLSH-DA 138

Query: 142 YAFRISSRLIHLATMILDSERYSASLRV-------IKYAGIAQFIGQLICQLPIHYHRGQ 194
           Y +  +  +  +   +  +   SA  R         +  G A      +  L     R  
Sbjct: 139 YVYGSAEVVGLMCLQVFLNAGMSAPARPAADLVDGARRLGAAFQDVNFLRDLADDADRLG 198

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF 254
                            +L G   D    A     +     L  A   + ++ PD   A 
Sbjct: 199 R---------------DYLDGAADDDRRTA---VLDRIDADLAAAASVIPHLPPDCRAAV 240

Query: 255 IPV-SITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                +   + +  +       +        V+      + + +
Sbjct: 241 TAAHDLFAELSRRLRLSPAG--APRVRVPDGVKATLAARALLGR 282


>gi|254356065|ref|ZP_04972342.1| squalene/phytoene synthase family protein [Burkholderia mallei
           2002721280]
 gi|148025048|gb|EDK83217.1| squalene/phytoene synthase family protein [Burkholderia mallei
           2002721280]
          Length = 402

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 71/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 66  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 125

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 126 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 185

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 186 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 245

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R+   +   
Sbjct: 246 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPDASLRVRPLMHAL 305

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 306 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 363

Query: 285 VR 286
            R
Sbjct: 364 RR 365


>gi|255543839|ref|XP_002512982.1| farnesyl-diphosphate farnesyltransferase, putative [Ricinus
           communis]
 gi|223547993|gb|EEF49485.1| farnesyl-diphosphate farnesyltransferase, putative [Ricinus
           communis]
          Length = 412

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 76/298 (25%), Gaps = 19/298 (6%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           LK   +N  K+     R   F    L  +     L         R ++   Y     L  
Sbjct: 20  LKMAARNAEKQIPPEPR-WGFCYSMLHKVSRSFALVIQQLGTELRDAVCIFYLVLRALDT 78

Query: 63  VRDTARNP-ITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDL 112
           V D    P   +   L  +     +                +     S   L + + Y  
Sbjct: 79  VEDDTSIPTDVKVPILIDFHKHIYNPEWHFSCGTKDYKVLMDQFHHVSTAFLELGKSYQE 138

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVI 170
             +     + A         +     ++ Y   ++  +    + +  +      A   + 
Sbjct: 139 AIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEDLAPDTLS 198

Query: 171 KYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
              G+      +I       +   + ++++P  I        E     +NS +    +  
Sbjct: 199 NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPHQIWSKYVTKLEDLKYEENSVKAVQCLND 258

Query: 228 FAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L ++    + M  +          IP  +    L     +  ++        +
Sbjct: 259 MVTNALIHMDDCLKYMSALRDPSIFRFCAIPQIMAIGTL-ALCYNNVEVFRGVVKMRR 315


>gi|322706213|gb|EFY97794.1| farnesyl-diphosphate farnesyltransferase [Metarhizium anisopliae
           ARSEF 23]
          Length = 405

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 87/311 (27%), Gaps = 26/311 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            +++E      +    + L               P  R+ +   Y     L  + D    
Sbjct: 31  HKRDEDNEPTTAKICYKFLDQTSRSFSPVIKELHPELRLPICVFYLVLRGLDTIEDDTSI 90

Query: 69  NPITRDMRLQWWKDIFES----STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +  T++  L+ + +  +      T     E      V+  +++ ++      +  +I+  
Sbjct: 91  SLKTKEPLLRDFHNFLDQDGWTFTCNRPEEKDRELLVQFHNVITEFKKIKPAYQAIIKDI 150

Query: 125 FFDSYN-------------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA-----S 166
                N              +I   + ++ Y + ++  +    T ++            +
Sbjct: 151 TSQMGNGMADFVRKSALGDVNIKTLEAYDLYCWYVAGVVGEGLTRLIVEANMGDARLVEN 210

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
            ++ K  G+      +   +   +   + ++P +I        E     +  D       
Sbjct: 211 AQLYKSMGLLLQKNNITRDVREDFDDNRCFWPQEIWSKHVDKFEDLFKPEYLDAALNCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
                 L++       ++ +          IP S+  +           +   +    + 
Sbjct: 271 EMVLNALRHTCDCFSYLKCLHDQSVFNFCAIPQSMAMATF-ELCFRNPAMFQRNIKIPRG 329

Query: 285 VRPWYMLSSSI 295
                M+ SS 
Sbjct: 330 DAFQLMIESSR 340


>gi|167536234|ref|XP_001749789.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771716|gb|EDQ85378.1| predicted protein [Monosiga brevicollis MX1]
          Length = 475

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/309 (10%), Positives = 76/309 (24%), Gaps = 23/309 (7%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           +    N + EE   + +       L               P  R ++   Y     L  V
Sbjct: 90  RLFPPNDQTEE---TANMQRCYYWLDKTSRSFSAVIKALHPDIRRAVCIFYLVLRGLDTV 146

Query: 64  RDTAR-NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQ-------YD 111
            D    +   +   L+ + D               E      VE   ++ +       Y 
Sbjct: 147 EDDMSLDENIKKDLLKSFHDKLFEPGWTFKGIGPQEKDRQLLVEFDVVIAEFLRLETKYS 206

Query: 112 LPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL---- 167
                    + A      +  +     +  Y   ++  +    + +       + +    
Sbjct: 207 EVIADICKKMGAGMIKFAHKQVETVDHYNLYCHYVAGLVGIGLSRLFSVSNLESEMVGKD 266

Query: 168 -RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I         G+ ++P  I          F+  Q+       + 
Sbjct: 267 VECSNSMGLFLQKTNIIRDYHEDLVDGRTWWPHQIWSLYAGKLGDFVEPQHEAAGLKCLN 326

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
                 L  + +  + M  +          IP  +  + L     +   ++  +    + 
Sbjct: 327 HLVADALDLVPEVFKYMSRLQDQSIFNFCAIPQVMAIATLS-LCYNNRNVLHRNVKIRKG 385

Query: 285 VRPWYMLSS 293
                M+ +
Sbjct: 386 QAVQLMMRA 394


>gi|74189702|dbj|BAE36836.1| unnamed protein product [Mus musculus]
          Length = 416

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  V D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAICVFYLVLRALDTVEDDMSI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+          + E     S+E  ++  +Y         
Sbjct: 89  SVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIDDICH 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  +  +   + ++ Y   ++  +    + +  +  +   +           G
Sbjct: 149 RMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDIECANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++ G      E F   +N D     +       L+
Sbjct: 209 LFLQKTNIIRDYLEDQQEGRKFWPQEVWGRYIKKLEDFAKSENVDVAVQCLNELITNTLQ 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVLTYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|186920350|gb|ACC95430.1| phytoene synthase [Cucumis melo]
          Length = 120

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 43/119 (36%), Gaps = 5/119 (4%)

Query: 139 FEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
           F    + ++  +  ++  ++           +        GIA  +  ++  +     RG
Sbjct: 1   FISTGYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNILRDVGEDARRG 60

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           ++Y P D L   GL  E   +G+ +D+    +K   +    +  +A + +  +      
Sbjct: 61  RIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKASRW 119


>gi|254203376|ref|ZP_04909737.1| squalene/phytoene synthase family protein [Burkholderia mallei FMH]
 gi|254205256|ref|ZP_04911609.1| squalene/phytoene synthase family protein [Burkholderia mallei JHU]
 gi|147745615|gb|EDK52694.1| squalene/phytoene synthase family protein [Burkholderia mallei FMH]
 gi|147754842|gb|EDK61906.1| squalene/phytoene synthase family protein [Burkholderia mallei JHU]
          Length = 404

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 73/302 (24%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 68  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 127

Query: 86  SSTKGLIA--------------------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
            +                          ES+ P    L  +        +  +  +    
Sbjct: 128 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 187

Query: 126 FDSYNDSIFD----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                    +              + Y + ++  +    T +  +        R      
Sbjct: 188 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 247

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R+   +   
Sbjct: 248 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPDASLRVRPLMHAL 307

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 308 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 365

Query: 285 VR 286
            R
Sbjct: 366 RR 367


>gi|115376402|ref|ZP_01463639.1| squalene synthase [Stigmatella aurantiaca DW4/3-1]
 gi|115366609|gb|EAU65607.1| squalene synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 402

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/316 (10%), Positives = 82/316 (25%), Gaps = 51/316 (16%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD 74
            I S    F    L ++     L   + P    + ++  Y     +  + D A    T  
Sbjct: 52  HIMSNPEAFCREALPEVSRTFALNIPVLPEPLDLVVTVGYLLCRIVDTIEDEATCSATLR 111

Query: 75  MRL-----------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
            +L           + W++     T  +              +V +     + F  + + 
Sbjct: 112 AQLLSEFARLVELPKGWREEVPRFTAQVGQWLRETVPEPEARLVHRTGTVLEAFAALPDW 171

Query: 124 HFFDSYN----------------------DSIFDCKQFEHYAFRISSRLIHLATMILDSE 161
                                          + D +    Y + ++  +  + T +    
Sbjct: 172 TQPPMARCVRAMADGMADVSRELALAPPASGLRDLEATLTYCYYVAGTVGEMLTELFIGF 231

Query: 162 RYSASLRVIK------YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSG 215
               + +  +        G A  +  ++  +     RG  + P  ++ A GL   + L  
Sbjct: 232 APRLANQANELRALSPAFGRALQLINILKDIREDLERGYCWLPRTVMAAHGLTARTLLYP 291

Query: 216 QNSDRISLAIKIFAELGLKYLFKAREEMRYILPD-------VFPAFIPVSITESVLKHAQ 268
           +N  R    +     +  +    + E    +  D                +    L   +
Sbjct: 292 ENRGRAVAMLNELVAVARREADISLEYALRLPVDEPGLRLFCLWPLFFAVLA---LSRLE 348

Query: 269 NHGFKIVS-HSHTPNQ 283
           N+   +        ++
Sbjct: 349 NNPA-VFEPQPVKISR 363


>gi|300711654|ref|YP_003737468.1| farnesyl-diphosphate farnesyltransferase [Halalkalicoccus jeotgali
           B3]
 gi|299125337|gb|ADJ15676.1| farnesyl-diphosphate farnesyltransferase [Halalkalicoccus jeotgali
           B3]
          Length = 355

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 89/319 (27%), Gaps = 51/319 (15%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
           + D  +    +  +     L   +        +   Y        V D     P T+   
Sbjct: 5   AADLEWCHEAVEGVSRTFALTIDVLDEPMSSYICVGYLLCRIADTVEDAHHIPPETQATL 64

Query: 77  LQWWKDIFE------------SSTKGLIAE----SISPFSVELLSIVRQYDLP------- 113
           L+ +  + +            S  + +  +    +          +VR ++         
Sbjct: 65  LRTYHAVLDPDDPTGVETFTESVAEWIPEDGERTADWEVVARTPRVVRTFERQPDSVIAA 124

Query: 114 -NQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSERYS-- 164
                L+++                 I    + E Y +  +  +  L T ++        
Sbjct: 125 IRPPVLELVSGMALFVERYADSGGLRIRTRTELEEYCYYAAGTVGLLITNLICRNTGPPG 184

Query: 165 ------------ASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRES 211
                             +  G+   +  +   +   YH    +Y P   L A G+ +E 
Sbjct: 185 EETEGVDPSVERTLYENAESFGLLLQLVNIAKDVYDDYHEEDNVYLPATWLDAEGVPQER 244

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL---PDVFPAF-IPVSITESVLKHA 267
            L+ + +D  +  +K  AE    +L  A+  +  +     +   A+ IP  +    L+  
Sbjct: 245 VLAAEYADGSTAVVKRTAEHARTFLDDAQRYLETLPEVEGNRLAAWAIPYLLAVGTLREL 304

Query: 268 QNHGFKIVSHS-HTPNQLV 285
                  +S      ++  
Sbjct: 305 SARPEDALSERDVKVSRSE 323


>gi|289467501|gb|ADC95435.1| squalene synthase [Withania somnifera]
          Length = 411

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/261 (11%), Positives = 69/261 (26%), Gaps = 17/261 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL--- 77
             F    L+ +     L     P   R ++   Y     L  V D    P    + +   
Sbjct: 37  WAFCYLMLQKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPADVKVPILIS 96

Query: 78  -------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
                  + W     +    ++ +     S   L + + Y    +     + A       
Sbjct: 97  FHQHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKHYQQAIEDITLRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    +++  +      A   +    G+      +I     
Sbjct: 157 KEVETTDDYDEYCHYVAGYVGLGLSILFHASGKEDLAPDSLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYHRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +      +++P +I        E     +NS +    +       L ++      M  
Sbjct: 217 DINEVPKCRMFWPREIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALSHVEDCLTYMPN 276

Query: 246 I--LPDVFPAFIPVSITESVL 264
           +          IP  +    L
Sbjct: 277 LRDPAICRLRGIPQVMVIGTL 297


>gi|77417509|gb|ABA82085.1| phytoene synthase [Pseudomonas sp. C9B1]
          Length = 177

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 48/175 (27%), Gaps = 11/175 (6%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT--------ARN 69
                   +++         A  L  P  R S   LY +      V D           +
Sbjct: 5   HDVVDHAEQSIAVGSKSFAAAAKLFAPETRESAVLLYAWCRHCDDVIDGQELGHGQVDGD 64

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
                 RL   + +  ++          P       +V+++ +P    LD +     D  
Sbjct: 65  RRAGQARLAELERLTRAAYTDEPLP--DPAFAAFQRVVKRHGIPLALPLDHLAGFRMDVE 122

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
                + +    Y + ++  +  +   I+ +       R     G+A     +  
Sbjct: 123 ERVYVELEDTLEYCYHVAGVVGVMMARIMGAADEETLDRACD-LGLAFQFTNIAR 176


>gi|119178581|ref|XP_001240952.1| hypothetical protein CIMG_08115 [Coccidioides immitis RS]
          Length = 472

 Score = 85.5 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 25/301 (8%), Positives = 72/301 (23%), Gaps = 26/301 (8%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
           +         L+          +   P   + +   Y     L  + D    P+     L
Sbjct: 39  TESEKKCYHFLKLTSRSFSAVIMELHPELLLPVCLFYLILRGLDTIEDDTSIPLKVKEPL 98

Query: 78  -----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPN--------QYFLDMIEAH 124
                 + +    +       E      V+  +++ ++                 M    
Sbjct: 99  LRNFKDFLEVDGWTFDGNRPEEKDRELLVQFHNVITEFKKIKPAYKAIIKDITDRMSNGM 158

Query: 125 FFDSYNDSIF-----DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
                            ++++ Y + ++  +    T +     ++    + +       G
Sbjct: 159 ADYCRKAEFENVNVNTVEEYDLYCWYVAGLVGEGLTRLFVEAGFARPQLLERPQLFKSMG 218

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I  +       + ++P +I        E     +N +             L 
Sbjct: 219 LFLQKTNIIRDVREDEDDNRRFWPKEIWSNHVDKWEDLFKPENREAAVNCGAEMILNALG 278

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           ++      +  +          IP S+  + L         +   +    +      M  
Sbjct: 279 HVDDCLYYLAGLKEQSVFNFCAIPQSMAIATL-ELCFRNPAMFDRNIKITKGQACRLMWQ 337

Query: 293 S 293
           S
Sbjct: 338 S 338


>gi|123718160|emb|CAJ58419.1| squalene synthase [Panax quinquefolius]
          Length = 415

 Score = 85.5 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/289 (10%), Positives = 76/289 (26%), Gaps = 19/289 (6%)

Query: 13  EEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           E++I S     F    L  +     L      P  R ++   Y        V D      
Sbjct: 28  EKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRAFDTVEDDTSIST 87

Query: 72  TRD--MRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMI 121
                + + +   I+++               +     S   L +   Y    +     +
Sbjct: 88  EVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMDEFHHVSNAFLDLGSGYKEAIEDITMRM 147

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFI 179
            A         +     ++ Y   ++  +    + +  +      A+  +    G+    
Sbjct: 148 GAGMAKFLCKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGAEDFATDSLSNSMGLFLQK 207

Query: 180 GQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
             +I       +   + ++++P  I        E     +NS +    +       L ++
Sbjct: 208 TNIIRDYLEDINEIPKSRMFWPCQIWSKYVDKLEDLKYEENSGKAVQCLNDMVTNALLHV 267

Query: 237 FKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               + M  +          IP  +    L     +  ++        +
Sbjct: 268 EDCLKYMSDLRDPAIFRFCAIPQIMAIGTL-ALCYNNIQVFRGVVKMRR 315


>gi|296221611|ref|XP_002756812.1| PREDICTED: squalene synthetase-like isoform 2 [Callithrix jacchus]
          Length = 417

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 75/293 (25%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S         L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYTYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+          + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  N  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLNKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N +     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQEGREFWPQEVWSRYVKKLGDFAKPENIELAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFRGVVKIRKGQ 320


>gi|189352944|ref|YP_001948571.1| squalene/phytoene synthase [Burkholderia multivorans ATCC 17616]
 gi|189336966|dbj|BAG46035.1| squalene/phytoene synthase [Burkholderia multivorans ATCC 17616]
          Length = 351

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 77/311 (24%), Gaps = 43/311 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDI- 83
             L+++    YL   + P   R  +   Y        + DTA   P  R   L   +D  
Sbjct: 13  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPERRAALLNALRDEI 72

Query: 84  ------------FESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        +  T+             +  ++     Q D        ++      
Sbjct: 73  ERLGDGVALSAALDDVTQMQTDSHEHVLLGSMRPMLALLRAQPDADRTSIRKVVATLTSG 132

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D              +      + Y + ++  +    T +      +A         
Sbjct: 133 MEFDLRTFPDEQSGQLAVLPTRDVLDRYTYLVAGCVGEFWTDMTAMHTRAARGWDAPAMR 192

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L A GL     L+     R    +  
Sbjct: 193 ERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLAAHGLRAADLLAPDAYRRARGVLFD 252

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKI-VSHSHTPN 282
              L L     A      I             P+ I    L+    H   +  +      
Sbjct: 253 LLRLALDQYRDACTYTVAIPRRFVRLRLACLWPILIGLETLELLAGHDGWLDPAKPAKVP 312

Query: 283 QLVRPWYMLSS 293
           +      M SS
Sbjct: 313 RKRIYRIMASS 323


>gi|260579667|ref|ZP_05847531.1| phytoene synthase [Corynebacterium jeikeium ATCC 43734]
 gi|258602209|gb|EEW15522.1| phytoene synthase [Corynebacterium jeikeium ATCC 43734]
          Length = 324

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 66/293 (22%), Gaps = 40/293 (13%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-- 75
              +    R +R      YLA  L  P  ++ +  +Y        + D     +      
Sbjct: 47  QASTSAASRIIRRYSTSFYLASKLLAPTIKLHIRNIYALARIADEIVDGTAEALGVAACG 106

Query: 76  -RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
                 +    + T      S  P +       R       + +D   +   D+ N    
Sbjct: 107 VAKTLNEYEQTTLTALDTGFSTDPIAHAFAVTARWAGFERSWTVDFFASMRSDAPNS--- 163

Query: 135 DCKQFEHYAFRISSRLIHLATMILDSERYSA-----------SLRVIKYAGIAQFIGQLI 183
                  Y    +  +  +   +  +    A           + +     G A      +
Sbjct: 164 TPLPLADYVHGSAGVIGWMCNAVFATHAEQAGSPLTTEQRSRTDQGAYALGSAFQKVNFL 223

Query: 184 CQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
                      + Y P     +                               L +A + 
Sbjct: 224 RDYQEDTVGLNRSYLPKLTEES--------------------KAELVSEIRAELAQAHDT 263

Query: 243 MRYILPDVFPAFIPV-SITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSS 293
           M  +        +    +  ++ +        ++ +      + V+   +  +
Sbjct: 264 MSLLPLAARVGVLGAHDLFAALNERLDRAPVAELKTARVQVPRAVKAKIIARA 316


>gi|312796601|ref|YP_004029523.1| Farnesyl-diphosphate farnesyltransferase [Burkholderia rhizoxinica
           HKI 454]
 gi|312168376|emb|CBW75379.1| Farnesyl-diphosphate farnesyltransferase (EC 2.5.1.21)
           [Burkholderia rhizoxinica HKI 454]
          Length = 402

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 44/301 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA------------------- 67
            L+ +    YL   + P   R  +   Y        + DT                    
Sbjct: 59  LLKGVSRSFYLTLRVLPAGMRDPVGLAYLLARAADTIADTPLIEPALRLRMLLTLRAHVN 118

Query: 68  ---RNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE-- 122
               +        +      + S +  + ES+ P    L  +  +     +  +  +   
Sbjct: 119 DAEHDRGPLREMARQLAAQHQQSDERRLLESLEPALAILQQLAERDREAVRGIVSTLTRG 178

Query: 123 --------AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS-------ASL 167
                   AH       ++    + + Y + ++  +    T +              A  
Sbjct: 179 MEFDLTTFAHERSGQMVALRAWHELDQYTYMVAGCVGAFWTEMTYMHLPRVLHGDPVAMS 238

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P  +L   GL     LS + + R    +  
Sbjct: 239 ARGVRFGKALQLTNVLRDCAKDLRIGRCYLPSTMLERYGLTPRDLLSAEAAGRARPVMLE 298

Query: 228 FAELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQN-HGFKIVSHSHTPN 282
                L     A +    I             P+ I    L    N   + +   +    
Sbjct: 299 LVRHALDQFRDAIDYTLAIRRSAPRLRLACLWPIVIGLKTLLLLVNSANWLVPEPAAKVR 358

Query: 283 Q 283
           +
Sbjct: 359 R 359


>gi|68535586|ref|YP_250291.1| putative phytoene synthase [Corynebacterium jeikeium K411]
 gi|68263185|emb|CAI36673.1| putative phytoene synthase [Corynebacterium jeikeium K411]
          Length = 375

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/298 (8%), Positives = 68/298 (22%), Gaps = 44/298 (14%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN----PITR 73
              +      +R      YLA  L  P  ++ +  +Y        + D        P   
Sbjct: 96  QASTSAAASIIRHYSTSFYLASELLAPTVKLHIRNIYALARIADEIVDGTAEALGVPACG 155

Query: 74  DMR-LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
             + L  ++    +        S  P +       R       + +D   +   D+ + +
Sbjct: 156 VTKTLDEYERT--TLKALDTGFSTDPIAHAFAVSARWAGFERSWTVDFFASMRSDAPSSN 213

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSA-----------SLRVIKYAGIAQFIGQ 181
                    Y    +  +  +   +  +    A           + +     G A     
Sbjct: 214 P---LPLADYVHGSAGVIGWMCNAVFATHAEQAGSPLTTEQRSRTDQGAYALGSAFQKVN 270

Query: 182 LICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            +           + Y P     +                             + L +A 
Sbjct: 271 FLRDYQEDTVGLQRRYLPKLTEES--------------------KAELVNEIREELAQAH 310

Query: 241 EEMRYILPDVFPAFIPV-SITESVLKHAQNHG-FKIVSHSHTPNQLVRPWYMLSSSIK 296
             M  +        +    +  ++ +        ++ +      +  +   +  +  +
Sbjct: 311 ATMALLPLAARVGVLGAHDLFAALNERLARTPVEQLKTARVQVPRAEKAKIIARAVPR 368


>gi|161520873|ref|YP_001584300.1| squalene/phytoene synthase [Burkholderia multivorans ATCC 17616]
 gi|160344923|gb|ABX18008.1| Squalene/phytoene synthase [Burkholderia multivorans ATCC 17616]
          Length = 367

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 77/311 (24%), Gaps = 43/311 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN-PITRDMRLQWWKDI- 83
             L+++    YL   + P   R  +   Y        + DTA   P  R   L   +D  
Sbjct: 29  DLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVVPERRAALLNALRDEI 88

Query: 84  ------------FESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        +  T+             +  ++     Q D        ++      
Sbjct: 89  ERLGDGVALSAALDDVTQMQTDSHEHVLLGSMRPMLALLRAQPDADRTSIRKVVATLTSG 148

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D              +      + Y + ++  +    T +      +A         
Sbjct: 149 MEFDLRTFPDEQSGQLAVLPTRDVLDRYTYLVAGCVGEFWTDMTAMHTRAARGWDAPAMR 208

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L A GL     L+     R    +  
Sbjct: 209 ERGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLAAHGLRAADLLAPDAYRRARGVLFD 268

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKI-VSHSHTPN 282
              L L     A      I             P+ I    L+    H   +  +      
Sbjct: 269 LLRLALDQYRDACTYTVAIPRRFVRLRLACLWPILIGLETLELLAGHDGWLDPAKPAKVP 328

Query: 283 QLVRPWYMLSS 293
           +      M SS
Sbjct: 329 RKRIYRIMASS 339


>gi|15080761|gb|AAG14896.2|AF302464_1 squalene synthase [Artemisia annua]
 gi|15217159|gb|AAK92539.1|AF405310_1 squalene synthase [Artemisia annua]
          Length = 418

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 80/300 (26%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I S+    F    L  +     L      P  R ++   Y     L
Sbjct: 17  LLKLKMAAKKAEKQIPSQPHWAFSYSMLHKVSRSFALVIQQLNPQLRDAVCIFYLVLRAL 76

Query: 61  MRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQY 110
             V D        +   L  +     +                +     S   L + R Y
Sbjct: 77  DTVEDDTSIAADIKVPILIAFHKHIYNRDWHFACGTKEYKVLMDQFHHVSTAFLELKRGY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
                     + A         +     ++ +   ++  +    + +  S       S  
Sbjct: 137 QEAIGDITMRMSAGMAKFICKEVETVDDYDEFCHYVAGLVGIGLSKLFHSSGTEILFSDS 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P +I        E     ++S++    +
Sbjct: 197 ISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIRSKYVNKLEDLKYEEDSEKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L ++    + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKLRR 315


>gi|66801783|ref|XP_629811.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium discoideum
           AX4]
 gi|74851174|sp|Q54DR1|FDFT_DICDI RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|60463199|gb|EAL61392.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium discoideum
           AX4]
          Length = 416

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 82/311 (26%), Gaps = 23/311 (7%)

Query: 2   VLKFLTKNTRKEEKIFSRDS---LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHT 58
           +LK     + K +     +     +    L               P  + ++   Y    
Sbjct: 16  LLKIGYTESFKPKSQLKENLGNKEWCYELLNKTSRSFAFVINELEPSLKDAICIFYLVLR 75

Query: 59  ELMRVRDTAR-NPITRDMRLQWWKDIF-----------ESSTKGLIAESISPFSVELLSI 106
            L  + D       T+   L  + +              ++ +  + E+        L +
Sbjct: 76  GLDTIEDDTTVELNTKLPVLTSFSEGLYQPGYKVFGYGMNNDEKNLVENFDKVVDVFLGL 135

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
              Y          +     +    S+    +++ Y   ++  +    + I  +    + 
Sbjct: 136 GDGYCTIIHDITRRMANGMSEFLQKSVVTLPEWDLYCHYVAGLVGIGLSKIFHASGLESE 195

Query: 167 LRVIKY-----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
                       G+      +I       +  ++++P D+     L  E+F   +     
Sbjct: 196 WFATADDESNQMGLFLQKTNIIRDYLEDINEKRIFWPRDVWARYTLHLENFKEAKYQIPA 255

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L +   A + M  +     +    IP  +    L     + + + +   
Sbjct: 256 LHCLNDLITNALSHALIALDYMSRLKNPQVINFCAIPQVMAIGTLNA-CYNNYNVFTGVV 314

Query: 280 TPNQLVRPWYM 290
              +  R   +
Sbjct: 315 KIRKGQRALIV 325


>gi|255955315|ref|XP_002568410.1| Pc21g13930 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590121|emb|CAP96290.1| Pc21g13930 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 473

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/298 (10%), Positives = 85/298 (28%), Gaps = 24/298 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             + EK  + +     + L               P   I +   Y     L  + D    
Sbjct: 31  HERNEKNETENQKICFKFLDKTSRSFSAVIKELHPELLIPICIFYLVLRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTKGLIAES----ISPFSVELLSIVRQYDLPNQYFLDMIE-- 122
           P  T++  L+ +KDI                     V+   ++ ++      +  +I+  
Sbjct: 91  PLATKEPLLRDFKDILTQDGWTFTGNRPEEKDRELLVQFNHVITEFMNMKPEYQAIIKDI 150

Query: 123 -----------AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                      A   ++ + S+   K+++ Y F ++  +    T +     +     + +
Sbjct: 151 TEKMGNGMADYAIKAENDDASVKTKKEYDLYCFYVAGLVGEGLTRLFVEAGFGNPALLKR 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   +   + ++P +I      + E     ++ D       
Sbjct: 211 PNLHKSMGLFLQKTNIIRDVREDFDDNRRFWPQEIWSNHVDNFEDLFKPEHLDAALNCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLK-HAQNHGFKIVSHSHTPNQ 283
                 L++  +    +  +       F  +  + ++           I   +    +
Sbjct: 271 EMVLNALEHAEECLFYLAGMREQSVFNFCAIPQSMAIATMELCFRNPDIFKRNIKITK 328


>gi|121709455|ref|XP_001272424.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
           clavatus NRRL 1]
 gi|119400573|gb|EAW10998.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
           clavatus NRRL 1]
          Length = 471

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/325 (9%), Positives = 81/325 (24%), Gaps = 39/325 (12%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++EK  S         L               P     +   Y     L  + D    
Sbjct: 31  HERDEKAESETLKQCFHFLDKTSRSFSAVIKELHPELLAPVCIFYLTLRGLDTIEDDTSI 90

Query: 70  PITRDMRL-----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P+     L      + +    + T     E      V+   ++ ++      +  +I+  
Sbjct: 91  PLATKEPLLRGFKDFLEQDGWNFTGNRPEEKDRELLVQFQCVIAEFKKMKPAYQAIIKDI 150

Query: 125 FFDSYNDS-------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                N               +   ++++ Y + ++  +    T +     +     + +
Sbjct: 151 TDRMGNGMADYCRKAAQDDASVKTVEEYDLYCWYVAGLVGEGLTRLFVEAEFGNPALLKR 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   +   + ++P +I        E     +N +       
Sbjct: 211 PELYKSMGLFLQKTNIIRDIREDFDDRRQFWPKEIWSKHVTKLEDLFKPENREAALNCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ- 283
                 L +  +    +  +          IP S+  + L     +   I   +    + 
Sbjct: 271 EMVLNALGHAEECLFYLAGLREQSVFNFCAIPQSMAIATLSLCFRNPA-IFERNIKITKG 329

Query: 284 ------------LVRPWYMLSSSIK 296
                       L   +      ++
Sbjct: 330 EACTLMVESTQNLRILYEAFRRYVR 354


>gi|109085567|ref|XP_001086419.1| PREDICTED: squalene synthase isoform 8 [Macaca mulatta]
          Length = 417

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICQ 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQEGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|89054453|ref|YP_509904.1| hypothetical protein Jann_1962 [Jannaschia sp. CCS1]
 gi|88864002|gb|ABD54879.1| hypothetical protein Jann_1962 [Jannaschia sp. CCS1]
          Length = 248

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 91/279 (32%), Gaps = 33/279 (11%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
                   +   D  R+ A + +P   R  L  LY F+ E+ R       P+  +MRLQW
Sbjct: 2   SIQACADLVARGDPRRFRAAMAAPLAAREVLLPLYAFNIEVSRAPWVTEEPMIAEMRLQW 61

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D  E   +             L  +  +     +    +I A  +D Y D+  D   F
Sbjct: 62  WRDALEEIAE--GRARRHEVVDALGFLDAEG---VEALDQLIAARRWDVYKDAFEDEAAF 116

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             Y  R S  LI      L     +A        G A  + + +  +P    RG++    
Sbjct: 117 AQYIQRTSGHLIDAGIRALGGTPTAA----TDALGTAAGLARYLVAVPALEARGRVPLL- 171

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              D  + A+   A+  L    +A  +   ++     A   V+ 
Sbjct: 172 -------------------DGRAAALSSLAQGAL----RAWPKRVDVVMPARAALFEVAG 208

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            +++LK        +        Q      ++++S   R
Sbjct: 209 AKAILKRVVADPGAVAEGRLDVPQGRETLSLMAASFLGR 247


>gi|212526208|ref|XP_002143261.1| farnesyl-diphosphate farnesyltransferase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210072659|gb|EEA26746.1| farnesyl-diphosphate farnesyltransferase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 471

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/299 (9%), Positives = 85/299 (28%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             +++           + L+          +   P   ++++  Y     L  + D    
Sbjct: 31  HERDDSKDPETRKKCFKFLKLTSRSFAAVIMELHPELLVAVTVFYLVLRGLDTIEDDTSV 90

Query: 70  P-ITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P   ++  L+ +K+I E            E      VE  +++ +Y      +  +I+  
Sbjct: 91  PLDVKEPLLRDFKNIIEKDGWTWNGNRPEEKDRQLLVEFDNVITEYKALKPAYRKIIKDM 150

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                               S     +++ Y + ++  +    T +    ++     + +
Sbjct: 151 TDKMGNGMADFVQKAETEGISTQTIGEYDLYCYYVAGLVGDGLTQLFVEAQFGNPALLSR 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   +   + ++P +I        E     +  +       
Sbjct: 211 PNLHKSMGLFLQKTNIIRDIREDHDDNRHFWPKEIWSKHVEKFEDLFDPKYKEAALNCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L+++ +    +  +          IP ++  + L       + +   +    +
Sbjct: 271 EMVLNALEHVDECLFYLAGLREQSVFNFCAIPQAMAIATL-ELCFRNYSMFERNIKITK 328


>gi|170690690|ref|ZP_02881856.1| Squalene/phytoene synthase [Burkholderia graminis C4D1M]
 gi|170143939|gb|EDT12101.1| Squalene/phytoene synthase [Burkholderia graminis C4D1M]
          Length = 348

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 67/270 (24%), Gaps = 39/270 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA--------------RNPIT 72
            L+ +    YL   + P   R  +   Y        + DT+              R+ I 
Sbjct: 13  LLKGVSRSFYLTLRVLPVGMRDPIGLAYLLARAADTIADTSLIAPEQRLQLLLSLRDQIN 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFD 127
                        +   G  ++S     +      L  + +  +        ++      
Sbjct: 73  GAANDGALFQRMAAEVAGQQSQSDEKLLLESLGPALDVLTQLSEPDRNAVRAIVSTLTEG 132

Query: 128 SYN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSERY-------SASL 167
                 +  D             + + Y + ++  +    T +  +              
Sbjct: 133 MEFDLRTFPDERSGRIAALREYGELDRYTYLVAGCVGEFWTTMTYAHMPGTLKERPDIMA 192

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P  +L   GL  +  L   NS R    +  
Sbjct: 193 ARGVRFGKALQMTNVLRDCGKDLRIGRSYLPQTMLEQHGLSPQDLLLPANSLRARPLMVE 252

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPV 257
                L +  +A +    I        +  
Sbjct: 253 LLRKTLDHFREALDYTLAIPAFSVRLRLAC 282


>gi|262202469|ref|YP_003273677.1| squalene/phytoene synthase [Gordonia bronchialis DSM 43247]
 gi|262085816|gb|ACY21784.1| Squalene/phytoene synthase [Gordonia bronchialis DSM 43247]
          Length = 307

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/269 (10%), Positives = 56/269 (20%), Gaps = 24/269 (8%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD-IFE 85
            +        LA  L     R  +  +Y        + D  R   T   R Q       E
Sbjct: 31  VISSYSSSFGLASRLLAKPVRRDVHNIYALVRVADEIVDAPRPDQTETQRRQALDALETE 90

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFR 145
                    S +          R+  +          +   D       D +    Y + 
Sbjct: 91  VIAALRTGSSSNLVVHAFARTARRTGIDAALVAPFFASMRADLDCAVH-DEQSLADYIYG 149

Query: 146 ISSRLIHLATMILDSERYSASLRVI------KYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
            +  +  +      S+      R        +  G A      +  L     +       
Sbjct: 150 SAEVVGLMCVHAFLSDHPHRKARYDQLAPGARRLGAAFQKVNFLRDLGEDAGQ------- 202

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-S 258
                  L R   +          A + + +     L  A   +  +      A      
Sbjct: 203 -------LGRRYLVGLDPDHPTEQAWQHWLDDIDADLAAAARTIPLLPNGTRVAVCTAHD 255

Query: 259 ITESVLKHAQN-HGFKIVSHSHTPNQLVR 286
           I   + +  +     +            +
Sbjct: 256 IFADLSRRLRATPPAQACRTRVRVPGREK 284


>gi|300022005|ref|YP_003754616.1| squalene synthase HpnC [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523826|gb|ADJ22295.1| squalene synthase HpnC [Hyphomicrobium denitrificans ATCC 51888]
          Length = 294

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 79/268 (29%), Gaps = 14/268 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
           + D +  +A  +    YR  +   Y F        D A  N   +   L   +D     +
Sbjct: 13  EHDENFPVASRIIASRYRAPILAFYRFARAADDAADHASLNVAEKLRILSALEDTLLGRS 72

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                      ++ L   +++  L  Q+ LD+++A   D   +   D  +   Y    + 
Sbjct: 73  DAAAD------ALPLRGELQKRGLSPQHALDLLKAFRQDVTKNRYADWAELIDYCRYSAM 126

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGL 207
            +      +       ++            I   +      +    ++Y PLD L   G 
Sbjct: 127 PVGRFV--LDVHGESKSTWVASDALCAVLQIINHVQDCGKDFRNIDRVYVPLDELARHGA 184

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP--VSITESVLK 265
           D       Q+S ++   ++       + L +A +    +            V++   +L 
Sbjct: 185 DVSDLARSQSSPQLRACLRAIVARTKELLPEASQLPPGVSDLRLSVETSVIVALARELLN 244

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                    +S     ++         +
Sbjct: 245 LLSTR--DPLSDRVHFSKGRAALIAGRA 270


>gi|327281725|ref|XP_003225597.1| PREDICTED: squalene synthase-like [Anolis carolinensis]
          Length = 418

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 76/293 (25%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + E+   S       + L                  R ++   Y     L  V D    
Sbjct: 30  PKMEQDSLSHSLRLCYKYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMTI 89

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            +   + +            W+ +  +     + E     S+E  ++ + Y         
Sbjct: 90  NLETKVPMLHNFHSYLYQPDWRFMESNEKDKQVLEDFPTISLEFRNLAKVYRDVIADICH 149

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +     +   K+++ Y   ++  +    + +  + +    +           G
Sbjct: 150 KMGLGMAEFLEKKVESEKEWDKYCHYVAGLVGIGLSQLFSASKLEDPIVGQDTELANSMG 209

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++              +N D+    +       L 
Sbjct: 210 LFLQKTNIIRDYYEDQLVGREFWPREVWSKYAKKVSDLAKPENIDKAVHCMNELITNALH 269

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 270 HVPDVLTYLSRLKNQSVFNFCAIPQVMAIATL-AACYNNQQVFRGVVKIRKGQ 321


>gi|9506591|ref|NP_062111.1| squalene synthase [Rattus norvegicus]
 gi|399484|sp|Q02769|FDFT_RAT RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|207071|gb|AAA42179.1| squalene synthetase [Rattus norvegicus]
 gi|51858605|gb|AAH81810.1| Farnesyl diphosphate farnesyl transferase 1 [Rattus norvegicus]
 gi|149030261|gb|EDL85317.1| farnesyl diphosphate farnesyl transferase 1 [Rattus norvegicus]
          Length = 416

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 79/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + +    S       + L                  R ++   Y     +  V D    
Sbjct: 29  PKMDRNSLSNSLKTCYKYLDQTSRSFAAVIQALDGDIRHAVCVFYLILRAMDTVEDDMAI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+         ++ E     S+E  ++  +Y         
Sbjct: 89  SVEKKIPLLRNFHTFLYEPEWRFTESKEKHRVVLEDFPTISLEFRNLAEKYQTVIADICH 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  N  +   + ++ Y   ++  +    + +  +  +   +           G
Sbjct: 149 RMGCGMAEFLNKDVTSKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDTECANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++ G      E F+  +N D     +       L+
Sbjct: 209 LFLQKTNIIRDYLEDQQEGRQFWPQEVWGKYVKKLEDFVKPENVDVAVKCLNELITNALQ 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNHQVFKGVVKIRKGQ 320


>gi|305680146|ref|ZP_07402956.1| phytoene/squalene synthetase [Corynebacterium matruchotii ATCC
           14266]
 gi|305660766|gb|EFM50263.1| phytoene/squalene synthetase [Corynebacterium matruchotii ATCC
           14266]
          Length = 308

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/285 (8%), Positives = 59/285 (20%), Gaps = 34/285 (11%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITRD 74
                 + +        LA  +     R  +  LY        + D        +     
Sbjct: 21  AFRAARQVISSYSTSFGLATRMLGKQQRTDIRNLYAMVRIADEIVDGTTKAAGFDIPATT 80

Query: 75  MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
             L+ ++         L      P         R+     ++      +   D       
Sbjct: 81  ALLEEYERQV--LAAPLRRFHPDPILHAYAITARRCKFDPEHIRAFFASMRTDLQKSMH- 137

Query: 135 DCKQFEHYAFRISSRLIHLATMIL------DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           +   ++ Y +  +  +  L   +       ++ R +      +  G A      +     
Sbjct: 138 NAASYKSYIYGSAEVIGLLCVSVFLAGRKVETWRRARMATGAQALGAAFQKINFLRDYAE 197

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            +      +    L                       K         L  A   +  + P
Sbjct: 198 DHATLGRQYFTLELTE------------------ATKKALIADIRTDLATAETAIGLLPP 239

Query: 249 DVF-PAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYML 291
                  +       +     +   + I +     +   R   + 
Sbjct: 240 SSRTGVQLATQFFTKLTNQLDHTDTRTIRNTRVRLSPTTRARIIA 284


>gi|126457897|ref|YP_001074370.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1106a]
 gi|242312045|ref|ZP_04811062.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1106b]
 gi|126231665|gb|ABN95078.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1106a]
 gi|242135284|gb|EES21687.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1106b]
          Length = 402

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 70/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 66  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 125

Query: 86  SSTKGLIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +                         +      L  + +           ++       
Sbjct: 126 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 185

Query: 129 YN--DSIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                +  D               + Y + ++  +    T +  +        R      
Sbjct: 186 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 245

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 246 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 305

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 306 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 363

Query: 285 VR 286
            R
Sbjct: 364 RR 365


>gi|1449163|dbj|BAA13083.1| squalene synthase [Glycyrrhiza glabra]
          Length = 413

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 69/280 (24%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     L      P  R ++   Y     L  V D        ++  L  
Sbjct: 37  WAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKEPILIA 96

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +                      +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENITKEMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 NEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSA 276

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|259485640|tpe|CBF82833.1| TPA: farnesyl-diphosphate farnesyltransferase, putative
           (AFU_orthologue; AFUA_7G01220) [Aspergillus nidulans
           FGSC A4]
          Length = 470

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/299 (8%), Positives = 78/299 (26%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             + EK  +       + L               P   + +   Y     L  + D    
Sbjct: 30  HERNEKNETETQKACFKFLDLTSRSFSAVIKELHPELLLPVCVFYLALRGLDTIEDDTSI 89

Query: 70  PITRDMRL-----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI--- 121
           P+     L      + +    +       E      V+  ++V ++      +  +I   
Sbjct: 90  PLETKEPLLRNFKDFLEQDGWTFDGNRPEEKDRELLVQFHNVVTEFRNMKPAYQVIIKDI 149

Query: 122 -----EAHFFDSYNDSIF-----DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                      +   +         ++++ Y + ++  +    T +     +     + +
Sbjct: 150 TDKMGNGMADYARKATFEDASVKTVEEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLKR 209

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +      G+ ++P  I      + E     +N +       
Sbjct: 210 TRLHKSMGLFLQKTNIIRDIREDEDDGRRFWPKSIWSKHVDNFEDLFKPENREAALNCNS 269

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L+++      +  +          IP ++  + L       + +   +    +
Sbjct: 270 EMVLNALEHVEDCLFYLAGLREQSVFNFCAIPQAMAIATL-ELCFRNYTMFERNIKITK 327


>gi|328872399|gb|EGG20766.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium
           fasciculatum]
          Length = 782

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/311 (9%), Positives = 83/311 (26%), Gaps = 23/311 (7%)

Query: 2   VLKFLTKNTRKEEKIFSRDS---LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHT 58
           +LK     + K +     +     +    L               P  R ++   Y    
Sbjct: 382 LLKIGYTESFKPKAQLKENLDNKEWCYELLNKTSRSFAFVISELEPQLRDAICIFYLVLR 441

Query: 59  ELMRVRDTARNP-ITRDMRLQWWKDIF-----------ESSTKGLIAESISPFSVELLSI 106
            L  V D    P   +   +  + +              ++ +  + E+        LS+
Sbjct: 442 GLDTVEDDTTVPLDVKLPVMHKFAEGLYQPGFKASGYGTNNDERHLVENFDKVVDVFLSL 501

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
              +    Q     +     +     +    +++ Y   ++  +    + I  +      
Sbjct: 502 NEGFCPIIQDITKRMAYGMSEFLQKEVVTMPEWDLYCHYVAGLVGIGLSKIFHASGLEGE 561

Query: 167 LRVIKY-----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
                       G+      +I       +  ++++P +I     +  ++F + Q +   
Sbjct: 562 WFATADKESNEMGLLLQKTNIIRDYLEDINENRIFWPREIWSKYTVKLDNFKNPQYASSA 621

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L +     + M  +     +    IP  +  + L     +   + +   
Sbjct: 622 LHCLNDLITNALSHTIVCLDYMGRLKNPKVIGFCAIPQVMAIATLNA-CYNNHGVFTGVV 680

Query: 280 TPNQLVRPWYM 290
              +  R   +
Sbjct: 681 KIRKGERALIV 691


>gi|197245548|gb|AAI68496.1| Unknown (protein for MGC:173117) [Xenopus (Silurana) tropicalis]
          Length = 416

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/296 (9%), Positives = 75/296 (25%), Gaps = 18/296 (6%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           T   R +    S       R L +                R ++   Y     L  V D 
Sbjct: 26  TVQPRLDPDSMSESLQTCYRYLNETSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDD 85

Query: 67  ARNPITRDMRL----------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQY 116
               +   + +          + W+ +        + E     S+E   +   Y      
Sbjct: 86  MTIALETKIPMLHDFHTYLYQEDWRYMHSKEKDKQVLEDFPTISLEFRKLAVIYQEVIAD 145

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK----- 171
               +     +     +   ++++ Y   ++  +    + +  +      +  +      
Sbjct: 146 ICHRMGVGMAEYLEKKVETLQEWDQYCHYVAGLVGIGLSRLFSASELEDPIVGLDTKLSN 205

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G+      +I         G+ ++P ++ G  G       + +        +      
Sbjct: 206 SMGLFLQKTNIIRDYLEDQMEGREFWPKEVWGKYGKKLSDLANPERIVPAVHCMNELITN 265

Query: 232 GLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            L ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 266 ALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|237809709|ref|YP_002894149.1| Squalene/phytoene synthase [Tolumonas auensis DSM 9187]
 gi|237501970|gb|ACQ94563.1| Squalene/phytoene synthase [Tolumonas auensis DSM 9187]
          Length = 343

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/313 (8%), Positives = 78/313 (24%), Gaps = 46/313 (14%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--------------NP 70
              L  +     L     P      +   Y        + D                 + 
Sbjct: 7   AELLAKVSRTFALTIPQLPAPLADWVGNAYLLCRIADTIEDEPALSCEEKASFIQLFLDV 66

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDM----IEAHFF 126
           ++         +          + +      + +S++  Y         +    ++    
Sbjct: 67  LSGTQPANQLHEQLSPRLSSGTSLAEQELITQTVSVIAHYQQFPDDVQQILLRGVQIMSR 126

Query: 127 DSYNDSI-------FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------YA 173
                          D    +HY + ++  +  + T +  + R + S    +        
Sbjct: 127 GMARYQYLASPQGLEDQTALDHYCYAVAGVVGEMLTALFIAYRPALSANKEELRALSVSF 186

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGL 233
           G+   +  ++  +     RG  ++P   L   G+         +   ++ + K    +  
Sbjct: 187 GLGLQLTNILKDVWDDARRGVCWWPQT-LIRQGIVWP----PTDKQTLTASRKELVAIAN 241

Query: 234 KYLFKAREEMRYILPD-------VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
            +L  A +    +  +          A     +    L+  Q     I   +    +   
Sbjct: 242 GHLRDALDYTLALPAEEQGLRQFCLWALGMAVL---TLQKIQRSDDYINGSNVKITRKDV 298

Query: 287 PWYMLSSSIKKRF 299
              +L   +  R+
Sbjct: 299 RRVILGCRLTGRY 311


>gi|310822658|ref|YP_003955016.1| squalene synthase [Stigmatella aurantiaca DW4/3-1]
 gi|309395730|gb|ADO73189.1| Squalene synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 349

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/314 (10%), Positives = 81/314 (25%), Gaps = 51/314 (16%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S    F    L ++     L   + P    + ++  Y     +  + D A    T   +
Sbjct: 1   MSNPEAFCREALPEVSRTFALNIPVLPEPLDLVVTVGYLLCRIVDTIEDEATCSATLRAQ 60

Query: 77  L-----------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
           L           + W++     T  +              +V +     + F  + +   
Sbjct: 61  LLSEFARLVELPKGWREEVPRFTAQVGQWLRETVPEPEARLVHRTGTVLEAFAALPDWTQ 120

Query: 126 FDSYN----------------------DSIFDCKQFEHYAFRISSRLIHLATMILDSERY 163
                                        + D +    Y + ++  +  + T +      
Sbjct: 121 PPMARCVRAMADGMADVSRELALAPPASGLRDLEATLTYCYYVAGTVGEMLTELFIGFAP 180

Query: 164 SASLRVIK------YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQN 217
             + +  +        G A  +  ++  +     RG  + P  ++ A GL   + L  +N
Sbjct: 181 RLANQANELRALSPAFGRALQLINILKDIREDLERGYCWLPRTVMAAHGLTARTLLYPEN 240

Query: 218 SDRISLAIKIFAELGLKYLFKAREEMRYILPD-------VFPAFIPVSITESVLKHAQNH 270
             R    +     +  +    + E    +  D                +    L   +N+
Sbjct: 241 RGRAVAMLNELVAVARREADISLEYALRLPVDEPGLRLFCLWPLFFAVLA---LSRLENN 297

Query: 271 GFKIVS-HSHTPNQ 283
              +        ++
Sbjct: 298 PA-VFEPQPVKISR 310


>gi|306966156|ref|NP_001135642.2| farnesyl-diphosphate farnesyltransferase 1 [Xenopus (Silurana)
           tropicalis]
          Length = 416

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/296 (9%), Positives = 75/296 (25%), Gaps = 18/296 (6%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           T   R +    S       R L +                R ++   Y     L  V D 
Sbjct: 26  TVQPRLDPDSMSESLQTCYRYLNETSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDD 85

Query: 67  ARNPITRDMRL----------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQY 116
               +   + +          + W+ +        + E     S+E   +   Y      
Sbjct: 86  MTIALETKIPMLHDFHTYLYQEDWRYMHSKEKDKQVLEDFPTISLEFRKLAVIYQEVIAD 145

Query: 117 FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK----- 171
               +     +     +   ++++ Y   ++  +    + +  +      +  +      
Sbjct: 146 ICHRMGVGMAEYLEKKVETLQEWDQYCHYVAGLVGIGLSRLFSASELEDPIVGLDTKLSN 205

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G+      +I         G+ ++P ++ G  G       + +        +      
Sbjct: 206 SMGLFLQKTNIIRDYLEDQMEGREFWPKEVWGKYGKKLSDLANPERIVPAVHCMNELITN 265

Query: 232 GLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            L ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 266 ALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|224924202|gb|ACN69082.1| squalene synthase [Diospyros kaki]
          Length = 415

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/280 (9%), Positives = 68/280 (24%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQ 78
             F    L  +     L         R ++   Y     L  V D           + L 
Sbjct: 37  WAFCYTMLHKVSRSFGLVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIATEVKVPILLA 96

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQ--------YDLPNQYFLDMIEAHFFDSYN 130
           +   I++               ++    V          Y    +     + A       
Sbjct: 97  FHHHIYDRDWHFSCGTREYKVLMDEFHHVSTAFLELGKGYQEAIEDITMRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASGLEDLAPDSLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L ++    + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVNKLEDLKYEKNSVKSVQCLNDMVTNALIHVDDCLKYMSA 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDPAIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|169596014|ref|XP_001791431.1| hypothetical protein SNOG_00755 [Phaeosphaeria nodorum SN15]
 gi|160701210|gb|EAT92250.2| hypothetical protein SNOG_00755 [Phaeosphaeria nodorum SN15]
          Length = 488

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 80/299 (26%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++E   +         L           L   P   + ++  Y     L  V D    
Sbjct: 33  HERDESKETESLKRCFFFLEKTSRSFSAVILELHPELLVPVALFYLILRGLDTVEDDMTI 92

Query: 70  PITRDM-RLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P+ +    L+ ++++ E            E      VE   ++ ++      + D+I+  
Sbjct: 93  PLEKKEPILRDFQNLLEQDGWTFNDNGPNEKDRQLLVEFNVVIEEFKKIKPAYRDIIKDI 152

Query: 125 FFDSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSASL---- 167
                N                   K +E Y   ++  +    T +      +       
Sbjct: 153 TKRMGNGMADYANNAEHNTNGVNTLKDYELYCHYVAGLVGEGLTRLFVEAGLANEALLRK 212

Query: 168 -RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
             +++  G       +   +      G+ ++P +I      + E     +N ++   A  
Sbjct: 213 PELMESMGQFLQQVNITRDIKEDLDDGRRFWPREIWSKHVDNFEDMFKPENKEKALAASS 272

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L         +  +          IP S+  + L       + I   +    +
Sbjct: 273 EMILTALTRADDCLYYLAGLREQSVFNFCAIPQSMAIATL-EVCFQNYAIFQKNVKITK 330


>gi|290760240|gb|ADD54645.1| squalene synthase [Bruguiera gymnorhiza]
          Length = 416

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/278 (8%), Positives = 71/278 (25%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQWW 80
           F    L  +     L      P  R ++   Y     L  V D       +   + + + 
Sbjct: 39  FCYTMLHKVSRSFALVIQQLGPQLRDAVCVFYLVLRALDTVEDDTSIATDVKVPILIAFH 98

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQ--------YDLPNQYFLDMIEAHFFDSYNDS 132
             +++               ++L   V          +    +     + A      +  
Sbjct: 99  HHLYDRDWHFSCGTKDYKVLMDLFHHVSTAFSELGKGHQEAIEEITKRMGAGMAKFISKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  + +    A   +    G+      +I       
Sbjct: 159 VETIDDYDEYCHYVAGLVGLGLSKLFHASQLEDLAPDDLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 HRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +      +++P +         E     +NS +    +       L ++    + M  + 
Sbjct: 219 NEIPKCRMFWPRETWSKYVDKLEDLKYEENSVKAVQCLNDMVTNSLIHVDDCLKYMSALQ 278

Query: 247 -LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                    IP  +    L     +  ++        +
Sbjct: 279 DPAIFRFCAIPQIMAIGTL-AMCYNNIEVFRGVVKMRR 315


>gi|254189473|ref|ZP_04895983.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254299529|ref|ZP_04966978.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 406e]
 gi|157809635|gb|EDO86805.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 406e]
 gi|157937151|gb|EDO92821.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 408

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 72/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 72  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 131

Query: 86  SSTKGLIA--------------------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
            +                          ES+ P    L  +        +  +  +    
Sbjct: 132 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 191

Query: 126 FDSYNDSIFD----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                    +              + Y + ++  +    T +  +        R      
Sbjct: 192 EFDLRTFPDESSGRVVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 251

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 252 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 311

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 312 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 369

Query: 285 VR 286
            R
Sbjct: 370 RR 371


>gi|83950343|ref|ZP_00959076.1| hypothetical protein ISM_04575 [Roseovarius nubinhibens ISM]
 gi|83838242|gb|EAP77538.1| hypothetical protein ISM_04575 [Roseovarius nubinhibens ISM]
          Length = 257

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 29/280 (10%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQW 79
           D       +R  D  R+ A + +P   R  L  LY F+ ++ R     +  +  +MRLQW
Sbjct: 7   DFTACAELVRRGDMPRFRAAMAAPVAARRVLLPLYAFNLQVARAPWVTKEAMIAEMRLQW 66

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+D       G +          L +++ +     +   +++ A  +D Y +   D   F
Sbjct: 67  WRDALAEIAAGGMV-RRHEVVTPLAAVLDR--TSAEELDELVLARRWDIYREPFEDEAAF 123

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
             +    +  L+  A               I  AG A  +   +  +P     G++    
Sbjct: 124 RQHLDHTAGHLLRAAVR----GLGGTPGAEIGDAGFALGLANWLRAVPALEAAGRVPLVD 179

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI 259
                              + +    +   +                     PA I +  
Sbjct: 180 G----------------RPEAVQALAQEGLDRLRAARRAGVAAEAR------PAMISLWQ 217

Query: 260 TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            E VL+ A     ++   +  P+       ++ +++  R+
Sbjct: 218 VEGVLRRAARDPRRVADGALEPSPFRDRLGLVITAVTGRW 257


>gi|237507474|ref|ZP_04520189.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|234999679|gb|EEP49103.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei MSHR346]
          Length = 404

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 72/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 68  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 127

Query: 86  SSTKGLIA--------------------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
            +                          ES+ P    L  +        +  +  +    
Sbjct: 128 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 187

Query: 126 FDSYNDSIFD----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                    +              + Y + ++  +    T +  +        R      
Sbjct: 188 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 247

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 248 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 307

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 308 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 365

Query: 285 VR 286
            R
Sbjct: 366 RR 367


>gi|254195437|ref|ZP_04901865.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei S13]
 gi|169652184|gb|EDS84877.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei S13]
          Length = 408

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 72/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 72  LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 131

Query: 86  SSTKGLIA--------------------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
            +                          ES+ P    L  +        +  +  +    
Sbjct: 132 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 191

Query: 126 FDSYNDSIFD----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                    +              + Y + ++  +    T +  +        R      
Sbjct: 192 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 251

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 252 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 311

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 312 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 369

Query: 285 VR 286
            R
Sbjct: 370 RR 371


>gi|119962910|ref|YP_946136.1| phytoene synthase [Arthrobacter aurescens TC1]
 gi|119949769|gb|ABM08680.1| phytoene synthase [Arthrobacter aurescens TC1]
          Length = 301

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 65/286 (22%), Gaps = 34/286 (11%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT---RDMRLQWWKD 82
           + +        LAC L    +R  +  +Y        + D          ++        
Sbjct: 22  QVISAYSTSFGLACRLLGSRHRQHVRNIYALVRVADELVDGVTAEAGLSYQEQCDALTHF 81

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE-- 140
           I E+     +  S            R   + +       ++   D    S          
Sbjct: 82  IAETHRAVKLGYSSDLIIHAFAQTARTAGIDDSLIDPFFDSMRMDLGERSEAPAAPLRFD 141

Query: 141 -----HYAFRISSRLIHLATMILDSERY------SASLRVIKYAGIAQFIGQLICQLPIH 189
                 Y    +  +  +   +   +        +A        G A      +  L   
Sbjct: 142 SDAHDGYVHGSAEVVGLMCLRVFMRDENIDDGDAAALEYGASRLGAAFQNINFLRDLADD 201

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             R         LG   L     L  ++       I+         L  A   +  +  D
Sbjct: 202 TTR---------LGRSYLGTSDHLEDRDRMEWVSTIRAQ-------LADANAVIPMLPRD 245

Query: 250 VFPAFIPV-SITESVLKHAQNHGFK-IVSHSHTPNQLVRPWYMLSS 293
              A     ++ +++    +      +  H       V+      +
Sbjct: 246 ARAAVRSALALFQALTDRIEQTTVDELYRHRVRVPDAVKAGLAARA 291


>gi|260950059|ref|XP_002619326.1| hypothetical protein CLUG_00485 [Clavispora lusitaniae ATCC 42720]
 gi|238846898|gb|EEQ36362.1| hypothetical protein CLUG_00485 [Clavispora lusitaniae ATCC 42720]
          Length = 448

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 84/307 (27%), Gaps = 30/307 (9%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F +     + K            L+              P  R ++   Y     L  V 
Sbjct: 23  FKSSMYPLDLKNAPESLKKCYVFLKLTSRSFAAVIEELHPELRDAVMIFYLVLRALDTVE 82

Query: 65  DTAR-NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLD 119
           D    +P  +   L+ + +               E      VE   I+ ++      + D
Sbjct: 83  DDMTIDPNVKVPLLRSFHEKLSLKDWNFDGNGPNEKDRIVLVEFHHILTEFHKLRPEYQD 142

Query: 120 MI--------EAHFFDSYNDSI-----FDCKQFEHYAFRISSRLI------HLATMILDS 160
           ++                +++         K F+ Y   ++  +        +     D+
Sbjct: 143 IVKKITKKMGNGMADYILDENFNTNGLETVKDFDLYCHYVAGLVGEGLSDLLVLARFADN 202

Query: 161 ERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV-GLDRESFLSGQNSD 219
           +  + + R+ +  G+      +I         G+ ++P +I           F   +  +
Sbjct: 203 QVQAENYRLSESMGLFLQKTNIIRDYHEDLEDGRSFYPREIWSKYTDSLPNFFKKPEERE 262

Query: 220 RISLAIKIFAELGLKYLFKAREEMRYILPDVFP---AFIPVSITESVLKHAQNHGFKIVS 276
           +    I       L ++      +  I  +        IP  +  + L     +  K++ 
Sbjct: 263 KGVECINDLVLNALNHVIDVLTYLSLI-RESTSFNFCAIPQVMAIATLAEIY-NNKKVLE 320

Query: 277 HSHTPNQ 283
            +    +
Sbjct: 321 TNVKIRK 327


>gi|295822109|gb|ADG36708.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 410

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 74/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S  LL + + Y    +     + A       
Sbjct: 97  FHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTALLELEKNYQAAIENITKGMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 NEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVNKIEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSA 276

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|50955184|ref|YP_062472.1| phytoene synthase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951666|gb|AAT89367.1| phytoene synthase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 298

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/279 (10%), Positives = 67/279 (24%), Gaps = 28/279 (10%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP---ITRDMRLQWWKDI 83
            +        +   L  P  R  +  +Y        + D A         D R       
Sbjct: 30  IIHQYSTSFGMVTRLLAPRVRPRVEDVYALVRIADEIVDGAAAEAGLDLADQRALLDALE 89

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYA 143
            ++        S +       +  R   +          +   D          +   Y 
Sbjct: 90  ADTERAMRTGYSANLVVHSFAATARDSGIGVALTRPFFASMRRDLSLVDF-TADELREYV 148

Query: 144 FRISSRLIHLATMILDSERYSASLRVI------KYAGIAQFIGQLICQLPIHYH-RGQLY 196
           +  +  +  +   +  ++   A  R        +  G A      +  L   Y   G+ Y
Sbjct: 149 YGSAEVVGLMCLAVFLTDSPVADDRRRRLEAGARRLGAAFQKINFLRDLAADYAGLGRSY 208

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP 256
           FP       G+D       Q                   L  A + +  +  +   A + 
Sbjct: 209 FP-------GIDPARLTERQ--------KLALVVDIDGDLGAAADAIAELPGNCRRAIVA 253

Query: 257 V-SITESVLKHAQNHGF-KIVSHSHTPNQLVRPWYMLSS 293
             ++   +    +      ++    +     +   +L +
Sbjct: 254 AHALFSELSDRIRATPARDLIVRRVSVPMRTKLAILLRA 292


>gi|2228795|gb|AAB61927.1| squalene synthase 2 [Arabidopsis thaliana]
          Length = 413

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/282 (9%), Positives = 73/282 (25%), Gaps = 20/282 (7%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQ 78
             F    L  +     L         R ++   Y     L  V D    P+     + + 
Sbjct: 37  LAFCYSILHKVSKSFSLVIQQLGTELRNAVCVFYLILRALDTVEDDTSVPVEIKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDGDWHFSCGTKEYKLLMDQFHHVSAAFLKLEKGYQEAIEDITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS----ASLRVIKYAGIAQFIGQLICQL 186
             +     ++ Y    +  +    + I  +           ++    G+      +I   
Sbjct: 157 KEVETIDDYDEYCHYAAGLVGLGLSKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDY 216

Query: 187 PIHYHRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
               +      +++P +I G      E F + + + +    +       L ++    + +
Sbjct: 217 LEDINERPKSRMFWPREIWGKYVDKLEDFKNEEKATKAVQCLNEMVTNALNHVEDCLKSL 276

Query: 244 RYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             +          IP  +    L     +  ++        +
Sbjct: 277 ASLRDPAIFQSCAIPQIVAIGTLT-LCYNNVQVFRGVVRMRR 317


>gi|156622393|emb|CAO98816.1| squalene synthase [Nakaseomyces delphensis]
          Length = 443

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 79/307 (25%), Gaps = 33/307 (10%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
             T N    +   +   +     L           +   P  R  +   Y     L  V 
Sbjct: 27  LFTTN----DTTATAGLIRCYELLTLTSRSFAAVIMELHPELRNVIMVFYLVLRALDTVE 82

Query: 65  DTAR-NPITRDMRLQWWKDIFESSTKGLIA----ESISPFSVELLSIVRQYDLPNQYFLD 119
           D     P  +   L+ +    ++           E       E   I+ +Y      +  
Sbjct: 83  DDMTIQPQLKVKTLREFDSKLDTDDWSFDGNDLKEKDRVVLTEFPVILAEYHKLKPEYQR 142

Query: 120 MI--------EAHFFDSYNDSI-----FDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
           +I                +D+         K ++ Y   ++  +    T ++    + + 
Sbjct: 143 VIKRITGLMGNGMADYILDDNFNLNGVQTIKDYDIYCHYVAGLVGDGLTELIVLAGFGSD 202

Query: 167 LRV--------IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNS 218
                       +  G+      +I       + G+ ++P ++          F   +N+
Sbjct: 203 DLYNGKNSFQLYESMGLFLQKTNIIRDYAEDLNDGRSFWPKEVWSLYADKLTDFKDPKNT 262

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVS 276
                 I       L ++      +  +          IP  +  + L    N+   ++ 
Sbjct: 263 QNGVNCINHLVLNALTHVIDVLTFLSSVHEQSTFQFCAIPQVMAVATLAKVFNNP-DVLK 321

Query: 277 HSHTPNQ 283
            +    +
Sbjct: 322 KNVKIRK 328


>gi|115456049|ref|NP_001051625.1| Os03g0805100 [Oryza sativa Japonica Group]
 gi|2463565|dbj|BAA22557.1| squalene synthase [Oryza sativa Japonica Group]
 gi|41469400|gb|AAS07223.1| squalene synthase [Oryza sativa Japonica Group]
 gi|108711634|gb|ABF99429.1| Squalene synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113550096|dbj|BAF13539.1| Os03g0805100 [Oryza sativa Japonica Group]
 gi|215769077|dbj|BAH01306.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 403

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 73/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-RLQW 79
             F    L+ +     L      P  R ++   Y     L  V D    P    +  L+ 
Sbjct: 33  WAFAYTMLQRVSRSFALVIQQLGPDLRNAVCIFYLVLRALDTVEDDTSIPAAVKVPILKE 92

Query: 80  WKDIFESSTKGLIAESISP---------FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +     +        +             S   L + + Y    +    ++ A       
Sbjct: 93  FHRHIYNRDWHYSCGTKDYKLLMDKFRLVSTAFLELGQGYQEAIEEITRLMGAGMAKFIC 152

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     +  Y   ++  + +  + +  +      AS  +    G+      +I     
Sbjct: 153 KEVETVDDYNEYCHYVAGLVGYGLSRLFHAGGTEDLASDSLSNSMGLFLQKINIIRDYLE 212

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P +I        E     +NS++    +       L +     + M  
Sbjct: 213 DINEIPKSRMFWPREIWSKYVNKLEDLKYEENSEKAVQCLNDMVTNALSHAEDCLQYMSA 272

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +          +   +        +
Sbjct: 273 LKDHAIFRFCAIPQIMAIGTC-AICYNNVNVFRGVVKMRR 311


>gi|913349|gb|AAB33404.1| squalene synthase [Homo sapiens]
          Length = 417

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/293 (9%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       R L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYRYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|67525837|ref|XP_660980.1| hypothetical protein AN3376.2 [Aspergillus nidulans FGSC A4]
 gi|40744164|gb|EAA63344.1| hypothetical protein AN3376.2 [Aspergillus nidulans FGSC A4]
          Length = 693

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/299 (8%), Positives = 78/299 (26%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             + EK  +       + L               P   + +   Y     L  + D    
Sbjct: 30  HERNEKNETETQKACFKFLDLTSRSFSAVIKELHPELLLPVCVFYLALRGLDTIEDDTSI 89

Query: 70  PITRDMRL-----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI--- 121
           P+     L      + +    +       E      V+  ++V ++      +  +I   
Sbjct: 90  PLETKEPLLRNFKDFLEQDGWTFDGNRPEEKDRELLVQFHNVVTEFRNMKPAYQVIIKDI 149

Query: 122 -----EAHFFDSYNDSIF-----DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                      +   +         ++++ Y + ++  +    T +     +     + +
Sbjct: 150 TDKMGNGMADYARKATFEDASVKTVEEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLKR 209

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +      G+ ++P  I      + E     +N +       
Sbjct: 210 TRLHKSMGLFLQKTNIIRDIREDEDDGRRFWPKSIWSKHVDNFEDLFKPENREAALNCNS 269

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L+++      +  +          IP ++  + L       + +   +    +
Sbjct: 270 EMVLNALEHVEDCLFYLAGLREQSVFNFCAIPQAMAIATL-ELCFRNYTMFERNIKITK 327


>gi|224105315|ref|XP_002313765.1| predicted protein [Populus trichocarpa]
 gi|222850173|gb|EEE87720.1| predicted protein [Populus trichocarpa]
          Length = 413

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 71/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQ 78
             F    L  +               R ++   Y     L  V D    P      + + 
Sbjct: 37  WAFCYSMLHRVSRSFAFVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++ +              +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDRNWHFSCGTNDYRVLMDQFHDVSTAFLELEKGYQEAIEDITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  +      AS  +    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASELEDLASDSISNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +     ++++P +I        E     +NS      +       L ++    + M  
Sbjct: 217 DINEIPMSRMFWPREIWSKYVNKLEDLKYEENSVEAVQCLNDMVTNSLIHVDDCLKYMSA 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +   +        +
Sbjct: 277 LREPAIFRFCAIPQVMAIGTL-AMCYNNINVFRGVVKMRR 315


>gi|303310469|ref|XP_003065247.1| farnesyl-diphosphate farnesyltransferase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240104907|gb|EER23102.1| farnesyl-diphosphate farnesyltransferase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320033822|gb|EFW15768.1| squalene synthetase [Coccidioides posadasii str. Silveira]
          Length = 472

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 81/312 (25%), Gaps = 30/312 (9%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           ++NT  E    +         L+          +   P   + +   Y     L  + D 
Sbjct: 32  SRNTANE----TESEKKCYHFLKLTSRSFSAVIMELHPELLLPVCLFYLILRGLDTIEDD 87

Query: 67  ARNP-ITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMI 121
              P   ++  L+ +KD  E            E      V+  +++ ++      +  +I
Sbjct: 88  TSIPFKVKEPLLRNFKDFLEVDGWTFDGNRPEEKDRELLVQFHNVITEFKKIKPAYKAII 147

Query: 122 --------EAHFFDSYNDSIF-----DCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
                                       ++++ Y + ++  +    T +     ++    
Sbjct: 148 KDIADRMGNGMADYCRKAEFENVNVNTVEEYDLYCWYVAGLVGEGLTRLFVEAGFARPQL 207

Query: 169 VIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
           + +       G+      +I  +       + ++P +I        E     +N +    
Sbjct: 208 LERPQLFKSMGLFLQKTNIIRDVREDEDDNRRFWPKEIWSNHVDKWEDLFKPENREAAVN 267

Query: 224 AIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
                    L ++      +  +          IP S+    L         +   +   
Sbjct: 268 CGAEMILNALGHVDDCLYYLAGLKEQSVFNFCAIPQSMAIGTL-ELCFRNPAMFDRNIKI 326

Query: 282 NQLVRPWYMLSS 293
            +      M  S
Sbjct: 327 TKGQACRLMWQS 338


>gi|225427738|ref|XP_002266150.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297744746|emb|CBI38008.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 74/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L         R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTLLHKVSRSFGLVIQQLGTELRNAICIFYLVLRALDTVEDDTSIRTDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + R Y    +     + A       
Sbjct: 97  FHRHIYDRDWHFACGTKDYKVLMDQFHHVSTAFLELERGYQEAIEDITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  + +    AS  +    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDELSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P +I        E     +NS +    +       L ++      M  
Sbjct: 217 DINEIPKSRMFWPREIWSKYVNKLEDLKEEENSIKAVQCLNDMVTNALIHMEDCLTYMSA 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LQSPAIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|67089147|ref|NP_004453.3| squalene synthase [Homo sapiens]
 gi|197098646|ref|NP_001126476.1| squalene synthase [Pongo abelii]
 gi|114623520|ref|XP_001141161.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 9
           [Pan troglodytes]
 gi|114623522|ref|XP_001141330.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 11
           [Pan troglodytes]
 gi|114623524|ref|XP_001141413.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 12
           [Pan troglodytes]
 gi|114623526|ref|XP_001141492.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 13
           [Pan troglodytes]
 gi|585126|sp|P37268|FDFT_HUMAN RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|75054824|sp|Q5R6U3|FDFT_PONAB RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|292510|gb|AAA60582.1| squalene synthetase [Homo sapiens]
 gi|307432|gb|AAA36645.1| squalene synthetase [Homo sapiens]
 gi|13097747|gb|AAH03573.1| Farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens]
 gi|20988196|gb|AAH29641.1| Farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens]
 gi|30582247|gb|AAP35350.1| farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens]
 gi|48146183|emb|CAG33314.1| FDFT1 [Homo sapiens]
 gi|55731622|emb|CAH92517.1| hypothetical protein [Pongo abelii]
 gi|60655561|gb|AAX32344.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
 gi|119586032|gb|EAW65628.1| farnesyl-diphosphate farnesyltransferase 1, isoform CRA_a [Homo
           sapiens]
 gi|119586033|gb|EAW65629.1| farnesyl-diphosphate farnesyltransferase 1, isoform CRA_a [Homo
           sapiens]
 gi|123979588|gb|ABM81623.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
 gi|123994413|gb|ABM84808.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
 gi|261861550|dbj|BAI47297.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
          Length = 417

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|114623530|ref|XP_001140917.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 6
           [Pan troglodytes]
          Length = 410

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/286 (8%), Positives = 74/286 (25%), Gaps = 11/286 (3%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 69  NPITRDMRLQWWKDIFES--STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           +   +   L  +               E     S+E  ++  +Y          +     
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQISLEFRNLAEKYQTVIADICRRMGIGMA 148

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQ 181
           +  +  +   ++++ Y   ++  +    + +  +  +   L           G+      
Sbjct: 149 EFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTN 208

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           +I         G+ ++P ++          F   +N D     +       L ++     
Sbjct: 209 IIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVIT 268

Query: 242 EMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 YLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 313


>gi|30584837|gb|AAP36671.1| Homo sapiens farnesyl-diphosphate farnesyltransferase 1 [synthetic
           construct]
 gi|61372946|gb|AAX43943.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
 gi|61372953|gb|AAX43944.1| farnesyl-diphosphate farnesyltransferase 1 [synthetic construct]
          Length = 418

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|14328083|gb|AAH09251.1| Farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens]
          Length = 417

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/293 (9%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       R L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYRYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|296535915|ref|ZP_06898068.1| phytoene synthase family protein [Roseomonas cervicalis ATCC 49957]
 gi|296263754|gb|EFH10226.1| phytoene synthase family protein [Roseomonas cervicalis ATCC 49957]
          Length = 186

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 4/176 (2%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           R  D DR+L  L +PP  R +L  L  F+ EL R R+ A N +T  +RLQWW+D      
Sbjct: 15  RRHDPDRFLCALFAPPERRETLFLLIAFNHELARAREAASNAMTALIRLQWWRDAVTE-A 73

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                      +  L   +RQ  L  +    MI+A   ++  +   D      Y    + 
Sbjct: 74  GTEAPPRRHEVATPLAEALRQGQLSAEDLHAMIDAREAETEEEIPSDSA-LLAYLRGTAG 132

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
                A         SASL  ++  G A  +  ++  +P    +G+   P + L  
Sbjct: 133 GFAVAAGRA--LGAPSASLAGLQSLGAAYGMAGVLRSIPQQSLQGRSLLPAETLAR 186


>gi|290962900|ref|YP_003494082.1| hypothetical protein SCAB_86171 [Streptomyces scabiei 87.22]
 gi|260652426|emb|CBG75559.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 346

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 70/282 (24%), Gaps = 8/282 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLAC-LLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           E    RD       +       YLA  LL P      +            + DT   P  
Sbjct: 15  EPRLRRDYDRQRDLVAGARRTSYLAARLLLPRPMLPHVVTATAVMHHGDDLLDTGPRP-- 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                 W     E         S  P    LL     +        + +     +     
Sbjct: 73  -RRVSAWASWEGEVRAALDTGRSDDPLVRALLHTTAAHPRLRVAVEEYLATAAAELDFTG 131

Query: 133 IFDCKQFEHYAF-RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                 ++ Y         + +A+++   +         +           +  L     
Sbjct: 132 FATEADYQDYLDAYSLPAFMLVASLLGPEDDDGRFRAACRTLIDGSQRLDFVNDLAEDLP 191

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
            G+L  P   L    +  E    G+    +   ++   E   +   +A   +  +     
Sbjct: 192 EGRLGIPARTLERFSVTAEDLAEGRRRVAVRELVEDQVE-ASRVCLRAAGRLPVLTAGPG 250

Query: 252 PAFIPVSITESVL--KHAQNHGFKIVSHSHTPNQLVRPWYML 291
              +   +   +L    A   G  ++  + +P  L     +L
Sbjct: 251 GVLLRAVVDIELLTADAAYARGAGLLRGAASPPPLGTARVLL 292


>gi|291385794|ref|XP_002709483.1| PREDICTED: squalene synthase [Oryctolagus cuniculus]
          Length = 417

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 77/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKIPLLHNFHSFLYEPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQKVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGMGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDIERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQREGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|226194814|ref|ZP_03790406.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|225933158|gb|EEH29153.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 333

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 67/297 (22%), Gaps = 44/297 (14%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFESSTKG 90
               YL   + P   R  +   Y        + D +   P  R   L   +     +   
Sbjct: 2   SRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQINGAPDP 61

Query: 91  LIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN--D 131
                                 +      L  + +           ++            
Sbjct: 62  HALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGMEFDLR 121

Query: 132 SIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLRVIKYA 173
           +  D               + Y + ++  +    T +  +        R           
Sbjct: 122 TFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGIRF 181

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGL 233
           G A  +  ++         G+ Y P  +L   GL  E  L    S R    +       L
Sbjct: 182 GKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHALVRTTL 241

Query: 234 KYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
            +     +    I           F P++I    L    ++           +++ R
Sbjct: 242 AHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKVRR 296


>gi|229821970|ref|YP_002883496.1| Squalene/phytoene synthase [Beutenbergia cavernae DSM 12333]
 gi|229567883|gb|ACQ81734.1| Squalene/phytoene synthase [Beutenbergia cavernae DSM 12333]
          Length = 303

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 76/308 (24%), Gaps = 37/308 (12%)

Query: 8   KNTRKEEKIFSRDSLFVLRNL-RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD- 65
           +      + +   +    R +  D          L     R  +  +Y        + D 
Sbjct: 6   RTQPSPRRRYDATAYRCARVVLADYSTSFSAGTRLLDARTRAYVESIYALVRIADEIVDT 65

Query: 66  ----TARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
                  +P     +L+  +   E+        S +      +    +  +         
Sbjct: 66  FAAQGPASPGQSRDQLEALRTETEA--ALERGWSTNVIVHAFVLTAARVGITRAETDPFF 123

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL----------RVIK 171
            +   D       D   +E Y +  +  +  +      +    A               +
Sbjct: 124 ASMAMDLDVRDH-DRASYERYVYGSAEVVGLMCLRAFLTAGRPAGAAALEPDDDALTGAR 182

Query: 172 YAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
             G A      +  L     R G+ YFP     A G   +             A+    +
Sbjct: 183 ALGAAFQKVNFLRDLGDDAGRLGRDYFPA----AHGGVLDH-----------GALLEILD 227

Query: 231 LGLKYLFKAREEMRYILPDVFPAF-IPVSITESVLKHAQN-HGFKIVSHSHTPNQLVRPW 288
              + L  AR+ +  + P    A  + + +   +          +I +       + +  
Sbjct: 228 EIEEDLALARDALAALPPRPRAAVTVTLELYTELFDTLSAMTPEEIRATRVRVPDVRKAL 287

Query: 289 YMLSSSIK 296
               +  +
Sbjct: 288 VAGRAMSR 295


>gi|167836952|ref|ZP_02463835.1| putative transferase [Burkholderia thailandensis MSMB43]
          Length = 127

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 45/126 (35%), Gaps = 1/126 (0%)

Query: 173 AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
            G A  + Q +  L     +G++Y P+D L   G+     L+ + +   +  ++      
Sbjct: 2   LGEALTLAQFVQDLGQDARQGRIYVPIDELQRYGVTAADLLNRRYTPAYTELMRFQTSRA 61

Query: 233 LKYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
              L  +   +               ++  +VL   +  GF+++        + + W   
Sbjct: 62  RDALNASLSGIPADERRAQRTLRALGALALAVLDEIERDGFQVLHQRIALTPIRKLWIAW 121

Query: 292 SSSIKK 297
            ++ ++
Sbjct: 122 RAARRR 127


>gi|149239989|ref|XP_001525870.1| squalene synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146449993|gb|EDK44249.1| squalene synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 449

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 79/293 (26%), Gaps = 28/293 (9%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
           S +       L               P  R ++   Y     L  V D    +P T+   
Sbjct: 37  SDELKRCYELLHLTSRSFAAVIEELHPELRDAIMIFYLVLRALDTVEDDMTIDPETKIPL 96

Query: 77  LQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           L+ + +  ++           E      VE   I++ Y      + ++I+   +   N  
Sbjct: 97  LRHFDEKLDTKNWTFNGSGPNEKDRAVLVEFDVILKIYHELKPQYQEIIKDITYKMGNGM 156

Query: 133 IF-------------DCKQFEHYAFRISSRLIHLATMILDSERY------SASLRVIKYA 173
                            + ++ Y   ++  +    T ++   ++                
Sbjct: 157 ADYILDENFNLNGVGSVEDYDLYCHYVAGLVGEGLTKLMVLAKFSDKSLAEDKFVKSNSM 216

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAV-GLDRESFLSGQNSDRISLAIKIFAELG 232
           G+      +I         G+ ++P DI                + ++    I       
Sbjct: 217 GLFLQKTNIIRDYHEDLQDGRSFWPKDIWSKYTDSLPSFHKDASHEEKGLACINELVLNA 276

Query: 233 LKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L ++    E +  +          IP  +  + L    N+  K++       +
Sbjct: 277 LGHVKHVLEFLSLVKDPSTFSFCAIPQVMAIATLAEVYNNP-KVLHGVVKIRK 328


>gi|295822099|gb|ADG36703.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/280 (9%), Positives = 73/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENITKGMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++ +   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 NEVETVDDYDEHCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSA 276

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|435677|emb|CAA48896.1| farnesyl-diphosphate farnesyltransferase [Homo sapiens]
 gi|739994|prf||2004281A squalene synthase
          Length = 417

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|148260184|ref|YP_001234311.1| phytoene/squalene synthetase-like protein [Acidiphilium cryptum
           JF-5]
 gi|326402874|ref|YP_004282955.1| hypothetical protein ACMV_07260 [Acidiphilium multivorum AIU301]
 gi|146401865|gb|ABQ30392.1| Phytoene/squalene synthetase-like protein [Acidiphilium cryptum
           JF-5]
 gi|325049735|dbj|BAJ80073.1| hypothetical protein ACMV_07260 [Acidiphilium multivorum AIU301]
          Length = 236

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 9/186 (4%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              +R  D DR+L  + +PP  R  L  LY F+ EL R R+ A  P    +RLQWW+++ 
Sbjct: 7   AAQVRRADPDRFLGAIFAPPQSRRWLFVLYAFNHELARAREVASQPPLALIRLQWWREVV 66

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E       A+   P +VEL + + Q    +     +I+A   ++    I D   F  YA 
Sbjct: 67  EG------ADRAHPLAVELRAGLAQGIFSDAALTALIDAREAEAEP--IPDRAAFLDYAR 118

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +  L  +A  +L     SA L  ++  G    I  ++   P     G+   P D    
Sbjct: 119 GTAGGLARIAGTVLGVTE-SAELAALEDLGTGYGIAGILRAAPALEAAGRDLLPQDGTDP 177

Query: 205 VGLDRE 210
             L  E
Sbjct: 178 AALRDE 183


>gi|295822103|gb|ADG36705.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 NEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPQQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSA 276

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|110293133|gb|ABG66304.1| squalene synthase [Polygala tenuifolia]
          Length = 413

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 68/274 (24%), Gaps = 18/274 (6%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQWWKDIFE 85
            L  +     L         R ++   Y     L  V D    P   +   L+ +     
Sbjct: 43  MLHKVSRSFALVIQQLDTDLRNAVCIFYLVLRALDTVEDDTSVPTDVKVPILKAFHRHIY 102

Query: 86  SSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
                            +     S   L + + Y    +     +           +   
Sbjct: 103 DREWHFSCGTKEYKVLMDQFHHVSTAFLELDKGYQEAIEDITQRMGVGMAKFICKEVETV 162

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH--- 191
             ++ Y   ++  +    + +  +      AS  +    G+      +I       +   
Sbjct: 163 DDYDEYCHYVAGLVGLGLSKLFHASSKEDLASDNLSNSMGLFLQKTNIIRDYLEDINEIP 222

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV- 250
           + ++++P  I        E     +NSD+    +       L +     + +  +     
Sbjct: 223 KSRMFWPRQIWSKYVNKLEDLKHEENSDKAVQCLNDMVTNALMHAEDCLKYVSALKDLAI 282

Query: 251 -FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                IP  +    L     +  ++        +
Sbjct: 283 FRFCAIPQIMAIGTL-ALCYNNVQVFRGVVKMRR 315


>gi|312214908|emb|CBX94862.1| similar to Farnesyl-diphosphate farnesyl transferase (squalene
           synthase) [Leptosphaeria maculans]
          Length = 483

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 82/299 (27%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++E + S         L        +  L   P   + ++  Y     L  V D    
Sbjct: 31  HERQEALESASLKRCFHFLGLTSRSFSMVILELHPELLVPIALFYLVLRGLDTVEDDMTI 90

Query: 70  PITRDM-RLQWWKDIFES----STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P+ +    L+ +++  +      T+    E      VE   ++ ++      + ++I+  
Sbjct: 91  PLEKKEPILRNFQNFLDQEGWTFTENGPNEKDRQLLVEFNVVIEEFKKIKPAYQEIIKDI 150

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS-----AS 166
                             N  +   + +E Y   ++  +    T +      +       
Sbjct: 151 TKRMGNGMADYANNAEFNNVGVNTIQDYELYCHYVAGLVGEGVTRMFVEGGLANAALLQK 210

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
             +++  G       +   +      G+ ++P +I        E     +N ++      
Sbjct: 211 PELMESMGQFLQQVNITRDIKEDLDDGRRFWPKEIWSKHVDKFEDLFKPENKEKALATSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L         +  I          IP S+  + L       + +   +    +
Sbjct: 271 EMILTALNRADDCLYYLAGIREQSVFNFCAIPQSMAIATLNA-CFQNYDVFQKNVKITK 328


>gi|241952052|ref|XP_002418748.1| farnesyl-diphosphate farnesyltransferase, putative; fpp:fpp
           farnesyltransferase, putative; squalene synthetase,
           putative [Candida dubliniensis CD36]
 gi|223642087|emb|CAX44053.1| farnesyl-diphosphate farnesyltransferase, putative [Candida
           dubliniensis CD36]
          Length = 448

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 81/302 (26%), Gaps = 30/302 (9%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
             + + +  ++ +     L               P  R ++   Y     L  + D    
Sbjct: 29  HPRTKDVNDKELIRCYELLNLTSRSFAAVIEELHPELRDAVMIFYLVLRALDTLEDDMTV 88

Query: 69  NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
            P  +   L+ +     +           E      +E  +I+  +      + D+I+  
Sbjct: 89  KPSIKIPLLREFDTKLNTKDWTFDGNGPNEKDRIVLIEFNNILNVFHRLKPQYQDIIKDI 148

Query: 125 FFDSYNDSIF-------------DCKQFEHYAFRISSRLI------HLATMILDSERYSA 165
            +   N                     +  Y   ++  +        +     D      
Sbjct: 149 TYKMGNGMAEYILDEEFNVNGVATIDDYNLYCHYVAGLVGEGLTNLFVLASFGDKTLTEN 208

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRIS--L 223
           +    +  G+      +I         G+ ++P +I      + + F     S + +   
Sbjct: 209 NFAKAESMGLFLQKTNIIRDYHEDLQDGRSFWPREIWSKYTENLQDF-HKDPSKKFAGVS 267

Query: 224 AIKIFAELGLKYLFKAREEMRYI-LPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            I       L ++    + +  +  P  F    IP  +  + L    N+  K++      
Sbjct: 268 CINELVLNALSHVTDCLDYLSLVKDPSSFSFCAIPQVMAVATLAEVYNNP-KVLHGVVKI 326

Query: 282 NQ 283
            +
Sbjct: 327 RK 328


>gi|114623518|ref|XP_001140197.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 1
           [Pan troglodytes]
          Length = 415

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|1389688|gb|AAC17923.1| squalene synthase [Leishmania major]
          Length = 414

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 86/314 (27%), Gaps = 22/314 (7%)

Query: 1   MVLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTE 59
           M +K+  ++ + +      D  F    + D+     +    L+    R ++   Y     
Sbjct: 11  MRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDAICIFYLVLRA 70

Query: 60  LMRVRDTARNP-ITRDMRLQWWKDIFESSTKGLIA---ESISPFSVELLSIVRQYDLPNQ 115
           L  + D    P   +   L  +       +  +             +   + R++    +
Sbjct: 71  LDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLAKYPCVSREFKKLKK 130

Query: 116 YFLDMIEAHFFDSYNDSIF-------DCKQFEHYAFRISSRLI-----HLATMILDSERY 163
            + D+I        N               +  Y   ++  +        A    +    
Sbjct: 131 EYQDVIANICERMANGMCEFLKRPVVTKDDYNQYCHYVAGLVGHGLTQLFARCGFEDPSL 190

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRI 221
              L    + G+      +I            ++++P +I G    + +   S  N+   
Sbjct: 191 DDDLTSSNHMGLFLQKTNIIRDYYEDIREEPPRMFWPKEIWGTYVTELKELKSESNNAAA 250

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L ++    + +  +          IP  +  + +K   N+         
Sbjct: 251 VQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIASVKEVYNNP-DTFQVKV 309

Query: 280 TPNQLVRPWYMLSS 293
             ++      ML +
Sbjct: 310 KVSRPESCRIMLKA 323


>gi|255716446|ref|XP_002554504.1| KLTH0F06886p [Lachancea thermotolerans]
 gi|238935887|emb|CAR24067.1| KLTH0F06886p [Lachancea thermotolerans]
          Length = 441

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/299 (10%), Positives = 82/299 (27%), Gaps = 27/299 (9%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
                + L           +   P  R ++   Y     L  + D    +P  +   L+ 
Sbjct: 39  LRRCYQLLTKTSRSFAAVIMELHPELRNAIMLFYLVLRALDTIEDDMTIDPKVKVPLLRD 98

Query: 80  WKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS--- 132
           +    +         + +       VE   I+++       +  +I+       N     
Sbjct: 99  FDSKLDLEDWSFNGNAPTEKDRCVLVEFPCILKELHKLKPEYQRVIKEITNKMGNGMASY 158

Query: 133 ----------IFDCKQFEHYAFRISSRLI------HLATMILDSERYSASLRVIKYAGIA 176
                     +   K ++ Y   ++  +        +       + Y+ S  + +  G+ 
Sbjct: 159 ILDENFNLNGVSTIKDYDLYCHYVAGLVGDGLTQLIVLANFGTPDLYNESAYLFESMGLF 218

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
                +I         G+ ++P +I          F   +++      I       L ++
Sbjct: 219 LQKTNIIRDYAEDLEDGRSFWPREIWSLYADKLVDFSLPEHTQDGLHCISHLVLNALSHV 278

Query: 237 FKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                 +  +          IP  +  + L     +  +++  +    +    + +L S
Sbjct: 279 EDVLTFLSSVHEQSSFQFCAIPQVMAIATLALVFGNP-EVLHKNVKIRKGTTCFLILKS 336


>gi|295822111|gb|ADG36709.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 410

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 77/293 (26%), Gaps = 20/293 (6%)

Query: 10  TRKEEKIFSRD--SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            R  EK    +    F    L  +     L      P  R ++   Y     L  V D  
Sbjct: 24  ARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDT 83

Query: 68  R--NPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYF 117
                +   + + + + I++                +     S   L + + Y    +  
Sbjct: 84  SIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENI 143

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A       + +     ++ Y   ++  +    + +  +      A   +    G+
Sbjct: 144 TKGMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGL 203

Query: 176 AQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +I       +   + ++++P  I        E     +NS +    +       
Sbjct: 204 FLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKIEDLKYEENSVKAVQCLNDMVTNA 263

Query: 233 LKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L +     + M  +          IP  +    L     +  ++        +
Sbjct: 264 LLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|121596813|ref|YP_990443.1| squalene/phytoene synthase family protein [Burkholderia mallei
           SAVP1]
 gi|121224611|gb|ABM48142.1| squalene/phytoene synthase family protein [Burkholderia mallei
           SAVP1]
          Length = 516

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 73/302 (24%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 180 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 239

Query: 86  SSTKGLIA--------------------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
            +                          ES+ P    L  +        +  +  +    
Sbjct: 240 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 299

Query: 126 FDSYNDSIFD----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                    +              + Y + ++  +    T +  +        R      
Sbjct: 300 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 359

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R+   +   
Sbjct: 360 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPDASLRVRPLMHAL 419

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 420 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 477

Query: 285 VR 286
            R
Sbjct: 478 RR 479


>gi|330791198|ref|XP_003283681.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium purpureum]
 gi|325086424|gb|EGC39814.1| farnesyl-diphosphate farnesyltransferase [Dictyostelium purpureum]
          Length = 411

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/311 (8%), Positives = 83/311 (26%), Gaps = 23/311 (7%)

Query: 2   VLKFLTKNTRKEEKIFSRDS---LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHT 58
           +LK     + K ++    +     +    L                  + ++   Y    
Sbjct: 13  LLKIGYTESFKPKEQLKDNLTNKEWCYELLNKTSRSFAFVINELEVNLKDAICIFYLVLR 72

Query: 59  ELMRVRDTAR-NPITRDMRLQWWKDIF-----------ESSTKGLIAESISPFSVELLSI 106
            L  + D       T+   +  + +              ++ +  + ++        LS+
Sbjct: 73  GLDTIEDDTTVEIKTKLPVMTQFSEGLYQPGFKVFGYGMNNDEKNLVQNFDKVVDVFLSL 132

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
              Y          +     +     +    +++ Y   ++  +    + I  +    + 
Sbjct: 133 GDSYCTIIHDITRRMANGMSEFLQKQVVTLPEWDLYCHYVAGLVGIGLSRIFHASGLESE 192

Query: 167 LRVIKY-----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
                       G+      +I       +  ++++P D+     L+ E+F   +     
Sbjct: 193 WFATADEESNQMGLFLQKTNIIRDYLEDINENRIFWPRDVWSRYTLNLENFKDPKYQISA 252

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L +   A + M  +     +    IP  +    L     + + + +   
Sbjct: 253 LHCLNDLITNALSHAVVALDYMSRLKNDKVINFCAIPQVMAIGTLNA-CYNNYNVFTGVV 311

Query: 280 TPNQLVRPWYM 290
              +  R   +
Sbjct: 312 KIRKGQRALIV 322


>gi|242780231|ref|XP_002479552.1| farnesyl-diphosphate farnesyltransferase, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218719699|gb|EED19118.1| farnesyl-diphosphate farnesyltransferase, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 471

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/299 (9%), Positives = 84/299 (28%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++           L  L               P   ++++  Y     L  + D    
Sbjct: 31  HERDTSKDPETLKKCLYLLDLTSRSFSAVIKELHPELLVAVAVFYLVLRGLDTIEDDTSV 90

Query: 70  P-ITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P   ++  L+ +K+I E            E      VE  +++ +Y      +  +I+  
Sbjct: 91  PLDVKEPLLRDFKNIIEKDGWTWNGNRPEEKDRQVLVEFDNVIAEYKKLKPAYRAIIKDM 150

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS----- 166
                               S+   ++++ Y + ++  +    T +    ++        
Sbjct: 151 TDKMGNGMADFVRKAETEGISVKTNEEYDLYCYYVAGLVGDGLTQLFVEAQFGNPGLLSR 210

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
             + K  G+      +I  +   +   + ++P +I        E     +  +       
Sbjct: 211 PNLHKSMGLFLQKTNIIRDIREDHDDQRHFWPQEIWSKHVEKFEDLFDPRCKEAALNCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L+++ +    +  +          IP ++  + L       + +   +    +
Sbjct: 271 EMVLNALEHVDECLFYLAGLREQSVFNFCAIPQAMAIATL-ELCFRNYSMFERNIKIKK 328


>gi|295822101|gb|ADG36704.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENITKGMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 NEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSA 276

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|295822091|gb|ADG36699.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 77/293 (26%), Gaps = 20/293 (6%)

Query: 10  TRKEEKIFSRD--SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            R  EK    +    F    L  +     L      P  R ++   Y     L  V D  
Sbjct: 24  ARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDT 83

Query: 68  --RNPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYF 117
                +   + + + + I++                +     S   L + + Y    +  
Sbjct: 84  GIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENI 143

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A       + +     ++ Y   ++  +    + +  +      A   +    G+
Sbjct: 144 TKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGL 203

Query: 176 AQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +I       +   + ++++P  I        E     +NS +    +       
Sbjct: 204 FLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNA 263

Query: 233 LKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L +     + M  +          IP  +    L     +  ++        +
Sbjct: 264 LLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|134280921|ref|ZP_01767631.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 305]
 gi|134247943|gb|EBA48027.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 305]
          Length = 333

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 67/297 (22%), Gaps = 44/297 (14%)

Query: 32  DYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFESSTKG 90
               YL   + P   R  +   Y        + D +   P  R   L   +     +   
Sbjct: 2   SRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQINDAPDP 61

Query: 91  LIAES-----------------ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN--D 131
                                 +      L  + +           ++            
Sbjct: 62  HALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGMEFDLR 121

Query: 132 SIFD-----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLRVIKYA 173
           +  D               + Y + ++  +    T +  +        R           
Sbjct: 122 TFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGIRF 181

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGL 233
           G A  +  ++         G+ Y P  +L   GL  E  L    S R    +       L
Sbjct: 182 GKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPDASLRARPLMHALVRTTL 241

Query: 234 KYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
            +     +    I           F P++I    L    ++           +++ R
Sbjct: 242 AHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKVRR 296


>gi|253993202|gb|ACT52826.1| squalene synthase 1 [Glycyrrhiza uralensis]
 gi|295822093|gb|ADG36700.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 77/293 (26%), Gaps = 20/293 (6%)

Query: 10  TRKEEKIFSRD--SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            R  EK    +    F    L  +     L      P  R ++   Y     L  V D  
Sbjct: 24  ARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDT 83

Query: 68  --RNPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYF 117
                +   + + + + I++                +     S   L + + Y    +  
Sbjct: 84  GIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENI 143

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A       + +     ++ Y   ++  +    + +  +      A   +    G+
Sbjct: 144 TKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGL 203

Query: 176 AQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +I       +   + ++++P  I        E     +NS +    +       
Sbjct: 204 FLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNA 263

Query: 233 LKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L +     + M  +          IP  +    L     +  ++        +
Sbjct: 264 LLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|114623516|ref|XP_001141004.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 7
           [Pan troglodytes]
          Length = 443

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|119386768|ref|YP_917823.1| hypothetical protein Pden_4061 [Paracoccus denitrificans PD1222]
 gi|119377363|gb|ABL72127.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
          Length = 271

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 93/277 (33%), Gaps = 14/277 (5%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
               LRD D DR+  CLL+P   R  L  LY  + EL R    +  P+  +MRLQWW + 
Sbjct: 6   CADALRDHDPDRFGICLLAPAEARAKLMTLYALNLELARAPLASTEPLIAEMRLQWWIER 65

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD-CKQFEHY 142
            E    G           ELL+ + +   P      ++          +  D       Y
Sbjct: 66  LEDIGAGKPQS------HELLTPLAEAWGPRAAGFAVLAEARRRDAARAPLDGPDAVVAY 119

Query: 143 AFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDIL 202
               +  L   A   LD      +              +      +   + +       L
Sbjct: 120 VRDTAVPLAQFAAEALDGATGGFAPP---DPRGVFGKRKNTEVASVIAAQAEGVGLAHWL 176

Query: 203 GAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITES 262
            A  L     L     D    A+   A      L +A+ + R++   + P   P +   +
Sbjct: 177 AA--LPALQGLGLGLWDAAPGALAQIAGHARAKLAEAKAQRRHVPRRLAPVLFPGAGVRA 234

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            L+ A   G + ++    P++  R   + S ++  R+
Sbjct: 235 ALQAAPR-GIEALAG-AAPSEFRRRLALGSFALTHRW 269


>gi|225055350|gb|ACN80637.1| Sio6 [Streptomyces sioyaensis]
          Length = 308

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 80/284 (28%), Gaps = 6/284 (2%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRI-SLSFLYYFHTELMRVRDTARNPIT 72
           +     D       +       Y+A LL  P      +     F      + D    P  
Sbjct: 13  DPQLREDFTRQRALVAGYKRAAYIAVLLLLPRPLAPHMIAATAFMHHTDNLLDHGPLPQR 72

Query: 73  RDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                 W +++ ++        S  P    LL    ++     +  D +     D     
Sbjct: 73  AAAYAAWEEEVNQAIA---TGTSDHPVIRPLLHTGARHPRLLGHVKDFLRTAATDLEFTG 129

Query: 133 IFDCKQFEHYAF-RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH 191
                 ++ Y         + +A +++  +  +      +           +  L     
Sbjct: 130 FATESDYQRYLDAYSLPAFMLVAGLLVPGDEPAGYRAACRTYIDGSQRLDFVNDLAEDLA 189

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
             +L  P D L + G+ R   +  Q++  +   ++         L  +   +  +     
Sbjct: 190 EDRLTVPQDTLVSHGVTRTDLVDAQDTPEVRALLRHLLHQARADLAASHRVIELLPAANR 249

Query: 252 P-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
           P A   +++ ++ +  A   G  +++ +  P        +    
Sbjct: 250 PFARALIALEKATVDAAGAKGPGLLTSAARPAVPALLTILTREY 293


>gi|147864614|emb|CAN81937.1| hypothetical protein VITISV_028001 [Vitis vinifera]
          Length = 431

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 74/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L         R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTLLHKVSRSFGLVIQQLGTELRNAICIFYLVLRALDTVEDDTSIRTDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + R Y    +     + A       
Sbjct: 97  FHRHIYDRDWHFACGTKDYKVLMDQFHHVSTAFLELERGYQEAIEDITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  +    + +  + +    AS  +    G+      +I     
Sbjct: 157 KEVETIDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDELSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P +I        E     +NS +    +       L ++      M  
Sbjct: 217 DINEIPKSRMFWPREIWSKYVNKLEDLKEEENSIKAVQCLNDMVTNALIHMEDCLTYMSA 276

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LQSPAIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|241952629|ref|XP_002419036.1| conserved hypthetical protein [Candida dubliniensis CD36]
 gi|223642376|emb|CAX42618.1| conserved hypthetical protein [Candida dubliniensis CD36]
          Length = 380

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 51/376 (13%), Positives = 112/376 (29%), Gaps = 91/376 (24%)

Query: 6   LTKNTRKEEKIFSRDSLFVL--------RNLRDIDYDRYLACLLSPPLYRISLSFLYYFH 57
           +T++    ++++S +   +L        + L   D   Y+     P   R +   +  F+
Sbjct: 2   ITRSRYISKRLYSTNYSAILFNAQENVNQLLESQDRSSYILAQYIPEPVRNTYLAIRAFN 61

Query: 58  TELMRVRDTARNPI-----------------TRDMRLQWWKDIFESSTKGLIAESIS--- 97
            E+ ++ +   N                   T D++ ++W D+                 
Sbjct: 62  LEINKINEGGSNVQSRAARASSQMSNTLGVSTADLKFKFWSDLILRVFTEDSRNETDLGE 121

Query: 98  PFSVELLSIV-RQYDLPNQYFLDMIEAHFFDS-YNDSIFDCKQFEHYAFRISSRLIHLAT 155
           P ++ L   +   ++L   YF   ++        N S         Y     S+L +L  
Sbjct: 122 PIAILLRDGLKHDFNLDISYFQQFLQTRRHFIKNNSSFQTVNDICSYGEGTFSQLNYLTQ 181

Query: 156 MI---------------LDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPL 199
            +                 +E  S    +  + G A  +  +I  +P +   R Q+  P+
Sbjct: 182 GLLLSPSISPSVIRLLEYSTELQSQMSDIAAHIGQATAVSSMILGVPFYAQSRNQITLPV 241

Query: 200 DILGAVGLDRESFLS------------GQNSDRISLAIKIFAELGLKYLFKAREEM---- 243
           D++ + GL +ES L              Q  + +   +   A     ++  A+ ++    
Sbjct: 242 DLMTSSGLSQESLLRLFQGHIKDSTEENQIKEALKNVVYETAITANDHMLTAKSKLEKAK 301

Query: 244 ------------------------RYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
                                   + I   ++   +    T   L   +   F I     
Sbjct: 302 QEIIKIVQEHPQDQLLNKYSKKWRKGIPDSLYVPTMASIPTSLFLNKLEKCNFDIFHGRL 361

Query: 280 TPNQLVRPWYMLSSSI 295
                 + W +   S 
Sbjct: 362 Q-----KEWRLPMKSF 372


>gi|1449165|dbj|BAA13084.1| squalene synthase [Glycyrrhiza glabra]
          Length = 412

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 76/300 (25%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I       F    L  +            P  R ++   Y     L
Sbjct: 17  LLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGPDLRNAVCIFYLVLRAL 76

Query: 61  MRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQY 110
             V D        +   L  +                      +     S   L + + Y
Sbjct: 77  DTVEDDTSIATDVKVPILIAFHRHIYDCDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A   +     +     ++ Y   ++  +    + +  +      AS  
Sbjct: 137 QEAIEDITKRMGAGMAEFICKEVETVDDYDEYCHYVAGLVGMGLSKLFHASGSEDLASDY 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P  I        E     +NS +    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +     + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTL-ALCYNNIELFRGVVKMRR 315


>gi|238818585|gb|ACR57219.1| squalene synthase [Salvia miltiorrhiza]
          Length = 413

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 79/298 (26%), Gaps = 19/298 (6%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           LK+  +N  K+         F    L  +     L         R ++   Y     L  
Sbjct: 20  LKYAARNAEKQIPP-EPHWGFCYTMLHKVSRSFGLVIQQLDTDLRDAICIFYLVLRALDT 78

Query: 63  VRDTAR--NPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDL 112
           V D       +   + + + + IF+                +     S   L +   Y  
Sbjct: 79  VEDDTSIATELKVPILMAFHRHIFDREWHFSCGTKEYRVLMDQFHHVSTAFLELAPGYQD 138

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVI 170
             +     + A         +     ++ Y   ++  +    + +  +      A+  + 
Sbjct: 139 AIEDITMRMGAGMAKFICKEVETTNDYDEYCHYVAGLVGLGLSKLFHASGKEDLATDAMS 198

Query: 171 KYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
              G+      +I       +   + ++++P  I        E   S +NS +    +  
Sbjct: 199 NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKSQENSVKAVQCLND 258

Query: 228 FAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L ++    + M  +          IP  +    L        ++        +
Sbjct: 259 MVTNALVHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTL-ALCYDNIEVFRGVVKMRR 315


>gi|295822107|gb|ADG36707.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 77/293 (26%), Gaps = 20/293 (6%)

Query: 10  TRKEEKIFSRD--SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            R  EK    +    F    L  +     L      P  R ++   Y     L  V D  
Sbjct: 24  ARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDT 83

Query: 68  --RNPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYF 117
                +   + + + + I++                +     S   L + + Y    +  
Sbjct: 84  GIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENI 143

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A       + +     ++ Y   ++  +    + +  +      A   +    G+
Sbjct: 144 TKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGL 203

Query: 176 AQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +I       +   + ++++P  I        E     +NS +    +       
Sbjct: 204 FLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNA 263

Query: 233 LKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L +     + M  +          IP  +    L     +  ++        +
Sbjct: 264 LLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|295822095|gb|ADG36701.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 77/293 (26%), Gaps = 20/293 (6%)

Query: 10  TRKEEKIFSRD--SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            R  EK    +    F    L  +     L      P  R ++   Y     L  V D  
Sbjct: 24  ARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDT 83

Query: 68  --RNPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYF 117
                +   + + + + I++                +     S   L + + Y    +  
Sbjct: 84  GIATDVKVPILIAFHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIESI 143

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A       + +     ++ Y   ++  +    + +  +      A   +    G+
Sbjct: 144 TKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGL 203

Query: 176 AQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +I       +   + ++++P  I        E     +NS +    +       
Sbjct: 204 FLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNA 263

Query: 233 LKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L +     + M  +          IP  +    L     +  ++        +
Sbjct: 264 LLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|222479633|ref|YP_002565870.1| Squalene/phytoene synthase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452535|gb|ACM56800.1| Squalene/phytoene synthase [Halorubrum lacusprofundi ATCC 49239]
          Length = 355

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 87/318 (27%), Gaps = 46/318 (14%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQ 78
           D  +    ++ +     L   +        +   Y        V D    P       L+
Sbjct: 12  DLSWCHEAVQGVSRTFALTVDVLEEPMASHICVGYLLCRVADTVEDAGHIPPEAQSDVLR 71

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDL------------------------PN 114
            ++   +      I          L +   + D                           
Sbjct: 72  TYRRAIDPDDDTDIVAFRDAVDEWLPAPADRNDDWEVVAEVPTIVATFAEFEPEARDAIV 131

Query: 115 QYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMI-----LDSERY 163
              L+M++                I D  + E Y +  +  + +L T +     +  +R 
Sbjct: 132 PPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLTRGDVTEDRA 191

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRIS 222
                  +  G+   +  +   +   Y     +Y P + L   G+D+E  +  +N +  +
Sbjct: 192 RQLRDTAEEFGLLLQLVNVSKDVYDDYTEENNVYLPAEWLADEGVDQERVVHPENRESSA 251

Query: 223 LAIKIFAELGLKYLFKAREEMRYIL------PDVFPAFIPVSITESVLKHAQNHGFKIVS 276
             +   AE    +L  A+  +  +        + +    P  +    L+   +     ++
Sbjct: 252 RVVSRTAEYARSFLDDAQAYLETMPLSNGNTMEAWTV--PYLLAVGTLRELSSRPEDALT 309

Query: 277 HS-HTPNQLVRPWYMLSS 293
            +    ++      M  +
Sbjct: 310 ETGVKISRQEVFAVMAVA 327


>gi|194376372|dbj|BAG62945.1| unnamed protein product [Homo sapiens]
          Length = 159

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQ 177
           + +++    +  + +  + K+ E+YA    S L++L   IL  +   A      + G AQ
Sbjct: 1   MKIVDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEILGIKDLHA-DHAASHIGKAQ 59

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
            I   +   P H  R +++ P+DI    G+ +E FL       +   I   A     +L 
Sbjct: 60  GIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLK 119

Query: 238 KAREEMRYILPDVFPAFI 255
            AR   + +    FPAF+
Sbjct: 120 HARSFHKTVPVKAFPAFL 137


>gi|103424267|emb|CAJ76132.2| squalene synthase [Leishmania donovani]
          Length = 414

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 78/297 (26%), Gaps = 22/297 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLA-CLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDM 75
             D  F    + D+     +    LS    R S+   Y     L  + D    P   +  
Sbjct: 28  ETDLCFCYDIMNDVSRSFAVVVAQLSDQQLRDSICIFYLVLRALDTLEDDMSVPVDVKLK 87

Query: 76  RLQWWKDIFESSTKGLIA---------ESISP-FSVELLSIVRQYDLPNQYFLDMIEAHF 125
            L  +       +  +               P  S E   + ++Y        + +    
Sbjct: 88  ELPKFHTHTSDMSWCMSGVGEGRERELLEKYPCVSREFQKLKKEYQDVIANICERMANGM 147

Query: 126 FDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQFIG 180
            +     +     +  Y   ++  +        A    +       L    + G+     
Sbjct: 148 CEFLKRPVITKDDYNQYCHYVAGLVGHGLTQLFARCDFEDPSLDDDLTTSNHMGLFLQKT 207

Query: 181 QLICQLPIHYHR--GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
            +I            ++++P +I G    + +   S  N+      +       L ++  
Sbjct: 208 NIIRDYYEDIREEPPRMFWPKEIWGIYVTELKELKSESNNAAAVQCLNAMVADALVHVPY 267

Query: 239 AREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             + +  +          IP  +  + LK   N+           ++      ML +
Sbjct: 268 IVDYLSALRDPSVFRFCAIPQVMAIATLKEVYNNP-DTFQVKVKVSRPESCRIMLKA 323


>gi|295822097|gb|ADG36702.1| squalene synthase 1 [Glycyrrhiza uralensis]
 gi|295822113|gb|ADG36710.1| squalene synthase 1 [Glycyrrhiza uralensis]
 gi|295822117|gb|ADG36712.1| squalene synthase 1 [Glycyrrhiza uralensis]
 gi|295822119|gb|ADG36713.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 NEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSA 276

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|241062166|gb|ACS66750.1| squalene synthase [Glycyrrhiza uralensis]
          Length = 413

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++                +     S   L + + Y    +     + A       
Sbjct: 97  FHRHIYDRVWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 NEVETADDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSA 276

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 277 LRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|46205580|ref|ZP_00209934.1| COG1562: Phytoene/squalene synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 137

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 1/121 (0%)

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGL 233
           G A  +  ++  +     RG+LY P++    +GL   +  S     R+    +  A    
Sbjct: 14  GRALQLTNILRDIDEDAARGRLYLPMEKFHRIGLMNPTPQSALAHPRLGEVCRAVAAEAQ 73

Query: 234 KYLFKAREEMRYILPDV-FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           ++  +    +          A +  +     L   +  G++       P +L      L 
Sbjct: 74  EHYRQTWAIIAKSPRRATKAARLMAAAYRLYLDAVEKRGWEAPRERVKPGKLSLLLVALR 133

Query: 293 S 293
            
Sbjct: 134 H 134


>gi|247706244|gb|ACT09104.1| phytoene synthase [Cucumis sativus]
          Length = 114

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 5/113 (4%)

Query: 145 RISSRLIHLATMILDSER-----YSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPL 199
            ++  +  ++  ++           +        GIA  +  ++  +     RG++Y P 
Sbjct: 1   YVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQ 60

Query: 200 DILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           D L   GL  E   +G+ +D+    +K   +    +  +A + +  +      
Sbjct: 61  DELAQAGLSDEDIFAGRVTDKWRNFMKSQIKRARMFFDEAEKGVLELNKASRW 113


>gi|212275798|ref|NP_001130502.1| hypothetical protein LOC100191601 [Zea mays]
 gi|194689326|gb|ACF78747.1| unknown [Zea mays]
          Length = 403

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/279 (9%), Positives = 77/279 (27%), Gaps = 16/279 (5%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD--MRLQ 78
             F    L+ +     L      P  R ++   Y     L  V D    P      +  +
Sbjct: 33  WAFAYSMLQKVSRSFALVIQQLGPELRNAVCIFYLVLRALDTVEDDTSIPTEVKVPILQE 92

Query: 79  WWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +++ ++                 +     S   L + + Y    +     + A       
Sbjct: 93  FYRHVYNRDWHYSCGTNHYKVLMDKFHLVSTAFLELGQGYQKAIEEITRRMGAGMAKFIC 152

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  + +  + +  +      A   +    G+      +I     
Sbjct: 153 KEVETVDDYDEYCHYVAGLVGYGLSRLFYAAGTEDLAPDSLSNSMGLFLQKTNIIRDYLE 212

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P +I        E F   +N+++    +       L +  +  + M  
Sbjct: 213 DINEIPKSRMFWPREIWSKYADKLEDFKYEENTEKAVQCLNDIVTNALIHAEECLQYMSA 272

Query: 246 ILPDVFPAFIPVSITESVLK-HAQNHGFKIVSHSHTPNQ 283
           +       F  V    ++       +   +        +
Sbjct: 273 LKNHAIFRFCAVPQIMAIGTCALCYNNVHVFRGVVKMRR 311


>gi|255075563|ref|XP_002501456.1| predicted protein [Micromonas sp. RCC299]
 gi|226516720|gb|ACO62714.1| predicted protein [Micromonas sp. RCC299]
          Length = 455

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 84/284 (29%), Gaps = 21/284 (7%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRD-MRLQ 78
           +  F    L  +     +     P   + ++   Y     L  V D    P       L+
Sbjct: 35  NLRFCYHMLNLVSRSFAIVIQQLPHELQDAVCVFYLVLRALDTVEDDMSIPDKPKCAELE 94

Query: 79  -WWKDIFESSTKGLIAESISPFSVELLSIV--------RQYDLPNQYFLDMIEAHFFDSY 129
            +WK I++        E      ++    V        ++Y          + A   +  
Sbjct: 95  IFWKKIYDPEYVYPCGEKHYKVLMDEYPKVTAVFLSLKKEYQDVIADITKRMGAGMSNFI 154

Query: 130 NDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQFIGQLIC 184
              +   + ++ Y   ++  +        A  +L+ +R++    +    G+      +I 
Sbjct: 155 KREVVTLEDWDEYCHYVAGLVGIGLSNLWANSMLEDKRFAEMEDLSNAMGLFLQKTNIIR 214

Query: 185 QLPIHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
                       ++++P  I    G   ++F   +N       +      GL +   + E
Sbjct: 215 DYLEDIMEEPAPRMFWPKCIWSKHGKTLDAFKEPENRAAAVACMNELITNGLTHATDSLE 274

Query: 242 EMRYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            M  +          IP  +  + +    ++G K+        +
Sbjct: 275 YMTRLKNVDVFRFCAIPQVMAIATMAECYDNG-KVFEGVVKIRR 317


>gi|114623514|ref|XP_001140371.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 2
           [Pan troglodytes]
          Length = 415

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 78/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 320


>gi|254485929|ref|ZP_05099134.1| conserved hypothetical protein [Roseobacter sp. GAI101]
 gi|214042798|gb|EEB83436.1| conserved hypothetical protein [Roseobacter sp. GAI101]
          Length = 255

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 56/284 (19%), Positives = 106/284 (37%), Gaps = 30/284 (10%)

Query: 16  IFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
           IF  D       +   D  R+ A + +P   R  L  LY F+ E+ R     +  +  +M
Sbjct: 2   IFDDDLTACAAMVERADPLRFRAAMAAPVAARRILFPLYAFNLEVARAPWVTQEAMIAEM 61

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RLQWW+D+ E  ++G         +  L + V       +   D++ A  +D Y D+  D
Sbjct: 62  RLQWWRDVCEEISEGRPV-RRHEVATPLAAAVTAAGA--KLLDDLVAARRWDIYRDAFED 118

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
              F+ Y  + +  L+ +A     S    A  RV++ A     +   +  +P    +G++
Sbjct: 119 TAHFDQYIDQTAGTLMWVAA----SSLGQADERVVRDAAYGAGVAAWLHAIPELVEQGRV 174

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
                                  D     +   A   L+ L KAR+  R +     PA  
Sbjct: 175 PLL--------------------DGTDAGVSALARKALERLKKARKHRREVSGSARPALF 214

Query: 256 PVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +  +  VL+ A +   ++   +      +  + +   ++  R+
Sbjct: 215 SIGASAKVLQAAIDAPARVGDGTL---PSMEAFSLPFRALSGRW 255


>gi|308173056|ref|YP_003919761.1| squalene/phytoene synthase [Bacillus amyloliquefaciens DSM 7]
 gi|307605920|emb|CBI42291.1| putative squalene/phytoene synthase [Bacillus amyloliquefaciens DSM
           7]
 gi|328552703|gb|AEB23195.1| squalene/phytoene synthase [Bacillus amyloliquefaciens TA208]
 gi|328911114|gb|AEB62710.1| putative squalene/phytoene synthase [Bacillus amyloliquefaciens
           LL3]
          Length = 247

 Score = 82.0 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 61/251 (24%), Gaps = 12/251 (4%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
                +                PP  R +   +     E  ++ D            ++ 
Sbjct: 4   YETCAQLAEAHFPLYKQTFSSLPPKNRQAAWAVLALFHEAEKLADVQ----------EFE 53

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
                +                L  + +Q+ L  + F + I     D   ++  +     
Sbjct: 54  GFEQAAQDVLNGTSPEGFLWEALADVRQQFGLEEEPFCEFIAGQRSDREKETYQEFDDLL 113

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            YA +    L  L   +                G A  + +++  +       +   P  
Sbjct: 114 MYAGQTGGALGLLLLPVCARRNQEKLRHAAVSLGAAVQLTRVLTGIHTDERMKKR-LPRQ 172

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSI 259
           ++   G   E       +       +        Y  +A EE+        PA    ++ 
Sbjct: 173 VMEQFGYTEEELERHTINKAFMNVWEYITFEAEAYFEEASEELELFPLYSRPAVTGLLAH 232

Query: 260 TESVLKHAQNH 270
             S L   +  
Sbjct: 233 YRSELDDMRKR 243


>gi|229893914|gb|ACQ90302.1| squalene synthase [Gynostemma pentaphyllum]
          Length = 417

 Score = 82.0 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 74/298 (24%), Gaps = 19/298 (6%)

Query: 3   LKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           LK   +N  K+         F    L  +     L      P  R ++   Y     L  
Sbjct: 20  LKMAARNAEKQIPQ-EPHWGFCYTMLHKVSRSFALVIQQLQPQLRNAVCIFYLVLRALDT 78

Query: 63  VRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDL 112
           V D        +   L  +     +                +     S   L + + Y  
Sbjct: 79  VEDDTSIETDIKVPILINFHRHIYNRDWHFSCGTKHYKVLMDEFHHVSTAFLELEKGYQE 138

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVI 170
                 + + A         +   + ++ Y   ++  +    + +  +      AS  + 
Sbjct: 139 AIGDVTNRMGAGMAKFICKEVETIEDYDEYCHYVAGLVGLGLSKLFHASGSEDLASDSIS 198

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
              G+      +I       +      +++P  I        E     +NS +    +  
Sbjct: 199 NSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRQIWSKYVDKLEDLKYEENSVKAVHCLND 258

Query: 228 FAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L ++      M  +          IP  +    L     +  ++        +
Sbjct: 259 MVTNALIHVEDCLIYMSNLKDLSIFRFCAIPQIMAIGTL-AICYNNIEVFRGVVKMRR 315


>gi|295822131|gb|ADG36719.1| squalene synthase 2 [Glycyrrhiza uralensis]
 gi|295822135|gb|ADG36721.1| squalene synthase 2 [Glycyrrhiza uralensis]
          Length = 412

 Score = 82.0 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 75/300 (25%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I       F    L  +            P  R ++   Y     L
Sbjct: 17  LLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGPDLRNAVCIFYLVLRAL 76

Query: 61  MRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQY 110
             V D        +   L  +                      +     S   L + + Y
Sbjct: 77  DTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  +      AS  
Sbjct: 137 QEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASGSEDLASDY 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P  I        E     +NS +    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +     + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTL-ALCYNNIELFRGVVKMRR 315


>gi|6636500|gb|AAF20201.1|AF205791_1 squalene synthase [Botryococcus braunii]
          Length = 461

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 88/307 (28%), Gaps = 23/307 (7%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           VL+ +  +   + K    D  F    L  +     +     P   R  +   Y     L 
Sbjct: 20  VLRMIYADKFGKIKPKDEDRGFCYEILNLVSRSFAIVIQQLPAQLRDPVCIFYLVLRALD 79

Query: 62  RVRDTARNPITRDMRL--QWWKDIFESSTKGLIAESISPF----------SVELLSIVRQ 109
            V D  +   T  + L   +++ I + S +    +               SV L    R+
Sbjct: 80  TVEDDMKIAATTKIPLLRDFYEKISDRSFRMTAGDQKDYIRLLDQYPKVTSVFLKLTPRE 139

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYS 164
            ++       M        +         ++ Y   ++  +    + +       S   +
Sbjct: 140 QEIIADITKRMGNGMADFVHKGVPDTVGDYDLYCHYVAGVVGLGLSQLFVASGLQSPSLT 199

Query: 165 ASLRVIKYAGIAQFIGQLICQLPIHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDRI 221
            S  +  + G+      +I       +     ++++P +I G    +   F    N    
Sbjct: 200 RSEDLSNHMGLFLQKTNIIRDYFEDINELPAPRMFWPREIWGKYANNLAEFKDPANKAAA 259

Query: 222 SLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
              +       L++     + M  I          IP ++    L     + + I +   
Sbjct: 260 MCCLNEMVTDALRHAVYCLQYMSMIEDPQIFNFCAIPQTMAFGTLS-LCYNNYTIFTGPK 318

Query: 280 TPNQLVR 286
              +L R
Sbjct: 319 AAVKLRR 325


>gi|255641455|gb|ACU21003.1| unknown [Glycine max]
          Length = 413

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 66/274 (24%), Gaps = 18/274 (6%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L  +     L         R ++   Y     L  V D        +   L  +     
Sbjct: 43  MLHKVSRSFALVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIY 102

Query: 86  SSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
                            +     S   L + + Y    +     + A         +   
Sbjct: 103 DRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETI 162

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH--- 191
             ++ Y   ++  +    + +  +      A   +    G+      +I       +   
Sbjct: 163 DDYDEYCHYVAGLVGLGLSKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIP 222

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPD 249
           + ++++P  I        E     +NS +    +       L +     + M  +   P 
Sbjct: 223 KSRMFWPRQIWSEYVNKLEDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMAALRDPPI 282

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                IP  +    L     +  ++        +
Sbjct: 283 FRFCAIPQIMAIGTL-ALCYNNIEVFRGVVKMRR 315


>gi|313754278|pdb|3LEE|A Chain A, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 gi|313754279|pdb|3LEE|B Chain B, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 gi|313754280|pdb|3LEE|C Chain C, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 gi|313754281|pdb|3LEE|D Chain D, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 gi|313754282|pdb|3LEE|E Chain E, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 gi|313754283|pdb|3LEE|F Chain F, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
          Length = 340

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 77/290 (26%), Gaps = 18/290 (6%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           ++   S       + L                  R ++   Y     L  + D     + 
Sbjct: 2   DQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVE 61

Query: 73  RDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + + L            W+ +        + E     S+E  ++  +Y          + 
Sbjct: 62  KKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMG 121

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQ 177
               +  +  +   ++++ Y   ++  +    + +  +  +   L           G+  
Sbjct: 122 IGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFL 181

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P ++          F   +N D     +       L ++ 
Sbjct: 182 QKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIP 241

Query: 238 KAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 242 DVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 290


>gi|301776579|ref|XP_002923714.1| PREDICTED: squalene synthase-like [Ailuropoda melanoleuca]
 gi|281347693|gb|EFB23277.1| hypothetical protein PANDA_012895 [Ailuropoda melanoleuca]
          Length = 417

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/293 (9%), Positives = 76/293 (25%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +      L           G
Sbjct: 149 KMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASELEDPLVGEDIECANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   QN D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQEGREFWPQEVWSKYVKKLGDFAKPQNIDSAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|11514495|pdb|1EZF|A Chain A, Crystal Structure Of Human Squalene Synthase
 gi|11514496|pdb|1EZF|B Chain B, Crystal Structure Of Human Squalene Synthase
 gi|11514497|pdb|1EZF|C Chain C, Crystal Structure Of Human Squalene Synthase
          Length = 340

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 76/290 (26%), Gaps = 18/290 (6%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           +    S       + L                  R ++   Y     L  + D     + 
Sbjct: 2   DRNSLSNSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVE 61

Query: 73  RDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + + L            W+ +        + E     S+E  ++  +Y          + 
Sbjct: 62  KKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMG 121

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQ 177
               +  +  +   ++++ Y   ++  +    + +  +  +   L           G+  
Sbjct: 122 IGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFL 181

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P ++          F   +N D     +       L ++ 
Sbjct: 182 QKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIP 241

Query: 238 KAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 242 DVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 290


>gi|254253945|ref|ZP_04947262.1| Phytoene/squalene synthetase [Burkholderia dolosa AUO158]
 gi|124898590|gb|EAY70433.1| Phytoene/squalene synthetase [Burkholderia dolosa AUO158]
          Length = 400

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 77/311 (24%), Gaps = 43/311 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-------- 77
             L+++    YL   + P   R  +   Y        + DTA     R   L        
Sbjct: 59  DLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVTPDRRAALLTDLRDDI 118

Query: 78  ------QWWKDIFESSTKGLIAESISPFSVELLSIVR----QYDLPNQYFLDMIEAHFFD 127
                        +  T+             +  ++     Q D        ++      
Sbjct: 119 ERLGDGAALSRSLDDVTRMQTDSHEHVLLASIQPMLALLRAQPDADRAAIRKVVATLTSG 178

Query: 128 SYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-- 172
              D             S+      + Y + ++  +    T +  +   +A    +    
Sbjct: 179 MEFDLRTFPDEQSGRIASLPTRDVLDRYTYLVAGCVGEFWTDMTAAHTRAARGWDLVAMR 238

Query: 173 -----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G A  +  ++         G+ Y P D+L A  LD     S   S R    +  
Sbjct: 239 DKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLRAHALDVADLTSADASLRARGVLVD 298

Query: 228 FAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKI-VSHSHTPN 282
              + L     A      I             P+ I    L+    H   +  +      
Sbjct: 299 LLHVALDQYRDACLYTIAIPRRFVRLRLACLWPIMIGLETLELLAGHDAWLDPAKPAKVP 358

Query: 283 QLVRPWYMLSS 293
           +      + SS
Sbjct: 359 RKRVYRIIASS 369


>gi|321267598|ref|NP_001189454.1| squalene synthase [Danio rerio]
 gi|220673404|emb|CAX13362.1| novel protein similar to vertebrate farnesyl-diphosphate
           farnesyltransferase 1 (FDFT1) [Danio rerio]
          Length = 418

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/301 (9%), Positives = 76/301 (25%), Gaps = 18/301 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + +    S         L                  R ++   Y     L  V D    
Sbjct: 29  PKLDYDSMSDTLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSI 88

Query: 70  PITRDM-RLQWWKDIFESSTKGLIAESISP---------FSVELLSIVRQYDLPNQYFLD 119
           P+ + +  LQ +                            SVE  ++ ++Y         
Sbjct: 89  PLEQKLPLLQDFHTFLYQPEWSFSQSREKDRRVLEDFPTISVEFRNLGQEYREVISDICH 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +     +   K+++ Y   ++  +    + +  + +                G
Sbjct: 149 RMGVGMAEFLEKKVSSMKEWDKYCHYVAGLVGIGLSRLFSASQLEEPEVGRDTELANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I        +G+ ++P +         E     Q+       + +     L+
Sbjct: 209 LFLQKTNIIRDYLEDQQQGRAFWPEEAWSQYASGLEDLAQPQHLSSALSCLNLLVTDALR 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           ++      +  +          IP  +  + L    N+  ++        +      M+ 
Sbjct: 269 HVPDVMLYLSRLRNQSVFNFCAIPQVMAIATLSACYNNP-QVFQGVVKIRKGQAVTLMMQ 327

Query: 293 S 293
           +
Sbjct: 328 A 328


>gi|133917206|emb|CAJ77652.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 413

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 77/293 (26%), Gaps = 20/293 (6%)

Query: 10  TRKEEKIFSRD--SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            R  EK    +    F    L  +     L      P  R ++   Y     L  V D  
Sbjct: 24  ARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDT 83

Query: 68  R--NPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYF 117
                +   + + + + I++                +     S   L + + Y    +  
Sbjct: 84  SIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENI 143

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A       + +     ++ Y   ++  +    + +  +      A   +    G+
Sbjct: 144 TKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGL 203

Query: 176 AQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +I       +   + ++++P  I        E     +NS +    +       
Sbjct: 204 FLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNA 263

Query: 233 LKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L +     + M  +          IP  +    L     +  ++        +
Sbjct: 264 LLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFGGVVKMRR 315


>gi|133917969|emb|CAJ77655.1| squalene synthase 2 [Glycyrrhiza eurycarpa]
          Length = 412

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 79/300 (26%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I       F    L  +            P  R ++   Y     L
Sbjct: 17  LLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGPDLRNAVCIFYLVLRAL 76

Query: 61  MRVRDTAR--NPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQY 110
             V D       +   + + + + I++                +     S   L + + Y
Sbjct: 77  DTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  +      AS  
Sbjct: 137 QEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASGSEDLASDY 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P  I        E      NS +    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEDNSVKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +     + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTL-ALCYNNIELFRGVVKMRR 315


>gi|76819243|ref|YP_336919.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1710b]
 gi|76583716|gb|ABA53190.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1710b]
          Length = 513

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 72/302 (23%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 177 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 236

Query: 86  SSTKGLIA--------------------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
            +                          ES+ P    L  +        +  +  +    
Sbjct: 237 GAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGM 296

Query: 126 FDSYNDSIFD----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                    +              + Y + ++  +    T +  +        R      
Sbjct: 297 EFDLRTFPDESSGRVVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 356

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    +   
Sbjct: 357 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHAL 416

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 417 VRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 474

Query: 285 VR 286
            R
Sbjct: 475 RR 476


>gi|114623528|ref|XP_001140843.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 5
           [Pan troglodytes]
          Length = 410

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/291 (9%), Positives = 77/291 (26%), Gaps = 18/291 (6%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           K +   S       + L                  R ++   Y     L  + D     +
Sbjct: 24  KRKDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISV 83

Query: 72  TRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
            + + L            W+ +        + E     S+E  ++  +Y          +
Sbjct: 84  EKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRM 143

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIA 176
                +  +  +   ++++ Y   ++  +    + +  +  +   L           G+ 
Sbjct: 144 GIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLF 203

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
                +I         G+ ++P ++          F   +N D     +       L ++
Sbjct: 204 LQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHI 263

Query: 237 FKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                 +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 264 PDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 313


>gi|73993617|ref|XP_534557.2| PREDICTED: similar to Farnesyl-diphosphate farnesyltransferase
           (Squalene synthetase) (SQS) (SS) (FPP:FPP
           farnesyltransferase) isoform 1 [Canis familiaris]
          Length = 417

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/293 (9%), Positives = 76/293 (25%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +      L           G
Sbjct: 149 KMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASELEDPLVGEDIECANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   QN D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQREGREFWPQEVWSKYVKKLGDFAKPQNIDSAVQCLNELITNALH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPHVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGIVKIRKGQ 320


>gi|253993200|gb|ACT52825.1| squalene synthase 2 [Glycyrrhiza uralensis]
 gi|295822121|gb|ADG36714.1| squalene synthase 2 [Glycyrrhiza uralensis]
          Length = 412

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 79/300 (26%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I       F    L  +            P  R ++   Y     L
Sbjct: 17  LLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGPDLRNAVCIFYLVLRAL 76

Query: 61  MRVRDTAR--NPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQY 110
             V D       +   + + + + I++                +     S   L + + Y
Sbjct: 77  DTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  +      AS  
Sbjct: 137 QEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASGSEDLASDY 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P  I        E      NS +    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEDNSVKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +     + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTL-ALCYNNIELFRGVVKMRR 315


>gi|254182738|ref|ZP_04889331.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1655]
 gi|184213272|gb|EDU10315.1| squalene/phytoene synthase family protein [Burkholderia
           pseudomallei 1655]
          Length = 513

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 74/302 (24%), Gaps = 44/302 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFE 85
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   +    
Sbjct: 177 LLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQIN 236

Query: 86  SSTKGLIA--------------------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
            +                          ES+SP    L  +        +  +  +    
Sbjct: 237 GAPDPHALARIAGEVAGQQAQTDEKTLLESLSPALAVLSQLSAPDRAAVRGVVTTLTEGM 296

Query: 126 FDSYNDSIFD----------CKQFEHYAFRISSRLIHLATMILDSE-------RYSASLR 168
                    +              + Y + ++  +    T +  +        R      
Sbjct: 297 EFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSE 356

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P  +L   GL  E  L    S R    + + 
Sbjct: 357 RGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHVL 416

Query: 229 AELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQL 284
               L +     +    I           F P++I    L    ++           +++
Sbjct: 417 VRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASN--DAWLDPARASKV 474

Query: 285 VR 286
            R
Sbjct: 475 RR 476


>gi|194208309|ref|XP_001915483.1| PREDICTED: similar to FDFT1 protein [Equus caballus]
          Length = 408

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 74/290 (25%), Gaps = 18/290 (6%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +   S       + L                  R ++   Y     L  + D     + 
Sbjct: 23  PQDSLSSSLRTCYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTISVE 82

Query: 73  RDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + + L            W+ +        + E     S+E  ++  +Y          + 
Sbjct: 83  KKVPLLHNFHSYLYEPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMG 142

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQ 177
               +  +  +   ++++ Y   ++  +    + +  +      L           G+  
Sbjct: 143 YGMAEFLDKHVTSEREWDKYCHYVAGLVGIGLSRLFSASELEDPLVGEDLERANSMGLFL 202

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P ++          F   +N D     +       L ++ 
Sbjct: 203 QKTNIIRDYLEDQREGREFWPQEVWSKYVKKLSDFAKPENIDSAVQCLNELITNTLHHIP 262

Query: 238 KAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                +  +          IP  +  + L  A  +  ++        +  
Sbjct: 263 DVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 311


>gi|296221609|ref|XP_002756811.1| PREDICTED: squalene synthetase-like isoform 1 [Callithrix jacchus]
          Length = 468

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 73/290 (25%), Gaps = 18/290 (6%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +   S         L                  R ++   Y     L  + D     + 
Sbjct: 83  PQDSLSSSLKTCYTYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVE 142

Query: 73  RDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + + L            W+          + E     S+E  ++  +Y          + 
Sbjct: 143 KKVPLLHNFHSFLYQPDWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMG 202

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQ 177
               +  N  +   ++++ Y   ++  +    + +  +  +   L           G+  
Sbjct: 203 IGMAEFLNKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFL 262

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P ++          F   +N +     +       L ++ 
Sbjct: 263 QKTNIIRDYLEDQQEGREFWPQEVWSRYVKKLGDFAKPENIELAVQCLNELITNALHHIP 322

Query: 238 KAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                +  +          IP  +  + L  A  +  ++        +  
Sbjct: 323 DVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFRGVVKIRKGQ 371


>gi|6321984|ref|NP_012060.1| Erg9p [Saccharomyces cerevisiae S288c]
 gi|729468|sp|P29704|FDFT_YEAST RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|458934|gb|AAB68360.1| Erg9p: Squalene synthetase [Saccharomyces cerevisiae]
 gi|285810095|tpg|DAA06882.1| TPA: Erg9p [Saccharomyces cerevisiae S288c]
          Length = 444

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 81/298 (27%), Gaps = 26/298 (8%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
            L     L               P  R  ++  Y     L  + D        +   L+ 
Sbjct: 39  LLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRH 98

Query: 80  WKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           + +    +       +          +  SI+ ++      + ++I              
Sbjct: 99  FHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADY 158

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
             +++           ++ Y   ++  +       +      +E   ++ ++ +  G+  
Sbjct: 159 ILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFL 218

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P +I        + F+  +N       I       L ++ 
Sbjct: 219 QKTNIIRDYNEDLVDGRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVI 278

Query: 238 KAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                +  I          IP  +  + L     +  +++  +    +    + +L S
Sbjct: 279 DVLTYLAGIHEQSTFQFCAIPQVMAIATL-ALVFNNREVLHGNVKIRKGTTCYLILKS 335


>gi|187918751|ref|YP_001887782.1| Squalene/phytoene synthase [Burkholderia phytofirmans PsJN]
 gi|187717189|gb|ACD18412.1| Squalene/phytoene synthase [Burkholderia phytofirmans PsJN]
          Length = 388

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 65/270 (24%), Gaps = 39/270 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT-------------------- 66
            L+ +    YL   + P   R  +   Y        + DT                    
Sbjct: 53  LLKGVSRSFYLTLRVLPVGMRDPIGLAYLLARAADTIADTSLISPEQRLALLLSLRAQVN 112

Query: 67  --ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
               +               + S + ++ ES+ P    L  +        +  +  +   
Sbjct: 113 GATDDVALFQRMAAEVAGQQDQSDEKVLLESLGPALDVLSQLSESDRKAVREIVSTLTEG 172

Query: 125 FFDSYNDSIFD----------CKQFEHYAFRISSRLIHLATMILDSERY-------SASL 167
                     +            + + Y + ++  +    T +  +              
Sbjct: 173 MEFDLRTFPDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHMPGTLKERPETMA 232

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
           R     G A  +  ++         G+ Y P  +L   GL  +  L   NS R    +  
Sbjct: 233 RRGVRFGKALQMTNVLRDCGKDLRIGRCYLPQTLLDRYGLSVQDLLVPANSVRARPLMLE 292

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPV 257
                L +   A +    I        +  
Sbjct: 293 LLRTTLDHFRDALDYTLAIPAFSVRLRLAC 322


>gi|5690074|emb|CAB51949.1| phytoene-beta carotene synthase [Xanthophyllomyces dendrorhous]
          Length = 673

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/392 (10%), Positives = 81/392 (20%), Gaps = 105/392 (26%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F +      +    RD    ++ L       ++A    P   R  L  LY F      + 
Sbjct: 284 FFSSRPYSSQP--KRDLELAVKLLEKKSRSFFVASAGFPSEVRERLVGLYAFCRVTDDLI 341

Query: 65  DTARNPITRDMRLQWWKDIF-------------ESSTKGLIAESISP------------- 98
           D+          +    D               +      +     P             
Sbjct: 342 DSPEVSSNPHATIDMVSDFLTLLFGPPLHPSQPDKILSSPLLPPSHPSRPTGMYPLPPPP 401

Query: 99  ------------------------FSVELLSIVRQYDLP---NQYFLDMI---EAHFFDS 128
                                      +L  ++ +Y L      Y  D+I         +
Sbjct: 402 SLSPAELVQFLTERVPVQYHFAFRLLAKLQGLIPRYPLDELLRGYTTDLIFPLSTEAVQA 461

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILD----------SERYSASLRVIKYAGIAQF 178
               I        Y   ++  +  L   +             E   A L   +  G A  
Sbjct: 462 RKTPIETTADLLDYGLCVAGSVAELLVYVSWASAPSQVPATIEEREAVLVASREMGTALQ 521

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRE-------SFLSGQNSD------------ 219
           +  +   +      G+ Y P   L   GL  E        +   +  D            
Sbjct: 522 LVNIARDIKGDATEGRFYLP---LSFFGLRDESKLAIPTDWTEPRPQDFDKLLSLSPSST 578

Query: 220 ------------RISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKH 266
                                          + + +  +  +V        +    + + 
Sbjct: 579 LPSSNASESFRFEWKTYSLPLVAYAEDLAKHSYKGIDRLPTEVQAGMRAACASYLLIGRE 638

Query: 267 AQNH-GFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +      +     T     R   +LS  +  
Sbjct: 639 IKVVWKGDVGERR-TVAGWRRVRKVLSVVMSG 669


>gi|171481|gb|AAA34597.1| squalene synthetase [Saccharomyces cerevisiae]
 gi|151944134|gb|EDN62427.1| farnesyl-diphosphate farnesyl transferase [Saccharomyces cerevisiae
           YJM789]
 gi|207344492|gb|EDZ71616.1| YHR190Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271502|gb|EEU06550.1| Erg9p [Saccharomyces cerevisiae JAY291]
 gi|259146949|emb|CAY80205.1| Erg9p [Saccharomyces cerevisiae EC1118]
          Length = 444

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 81/298 (27%), Gaps = 26/298 (8%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
            L     L               P  R  ++  Y     L  + D        +   L+ 
Sbjct: 39  LLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRH 98

Query: 80  WKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           + +    +       +          +  SI+ ++      + ++I              
Sbjct: 99  FHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADY 158

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
             +++           ++ Y   ++  +       +      +E   ++ ++ +  G+  
Sbjct: 159 ILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFL 218

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P +I        + F+  +N       I       L ++ 
Sbjct: 219 QKTNIIRDYNEDLVDGRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVI 278

Query: 238 KAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                +  I          IP  +  + L     +  +++  +    +    + +L S
Sbjct: 279 DVLTYLASIHEQSTFQFCAIPQVMAIATL-ALVFNNREVLHGNVKIRKGTTCYLILKS 335


>gi|323304652|gb|EGA58415.1| Erg9p [Saccharomyces cerevisiae FostersB]
 gi|323308714|gb|EGA61953.1| Erg9p [Saccharomyces cerevisiae FostersO]
 gi|323333208|gb|EGA74607.1| Erg9p [Saccharomyces cerevisiae AWRI796]
 gi|323348206|gb|EGA82456.1| Erg9p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354715|gb|EGA86550.1| Erg9p [Saccharomyces cerevisiae VL3]
          Length = 431

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 81/298 (27%), Gaps = 26/298 (8%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
            L     L               P  R  ++  Y     L  + D        +   L+ 
Sbjct: 26  LLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRH 85

Query: 80  WKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           + +    +       +          +  SI+ ++      + ++I              
Sbjct: 86  FHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADY 145

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
             +++           ++ Y   ++  +       +      +E   ++ ++ +  G+  
Sbjct: 146 ILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFL 205

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P +I        + F+  +N       I       L ++ 
Sbjct: 206 QKTNIIRDYNEDLVDGRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVI 265

Query: 238 KAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                +  I          IP  +  + L     +  +++  +    +    + +L S
Sbjct: 266 DVLTYLASIHEQSTFQFCAIPQVMAIATL-ALVFNNREVLHGNVKIRKGTTCYLILKS 322


>gi|241062156|gb|ACS66749.1| squalene synthase [Glycyrrhiza uralensis]
 gi|295822123|gb|ADG36715.1| squalene synthase 2 [Glycyrrhiza uralensis]
 gi|295822125|gb|ADG36716.1| squalene synthase 2 [Glycyrrhiza uralensis]
 gi|295822133|gb|ADG36720.1| squalene synthase 2 [Glycyrrhiza uralensis]
 gi|295822137|gb|ADG36722.1| squalene synthase 2 [Glycyrrhiza uralensis]
 gi|295822139|gb|ADG36723.1| squalene synthase 2 [Glycyrrhiza uralensis]
 gi|295822141|gb|ADG36724.1| squalene synthase 2 [Glycyrrhiza uralensis]
          Length = 412

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 79/300 (26%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I       F    L  +            P  R ++   Y     L
Sbjct: 17  LLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGPDLRNAVCIFYLVLRAL 76

Query: 61  MRVRDTAR--NPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQY 110
             V D       +   + + + + I++                +     S   L + + Y
Sbjct: 77  DTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  +      AS  
Sbjct: 137 QEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASGSEDLASDY 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P  I        E      NS +    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEDNSVKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +     + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTL-ALCYNNIELFRGVVKMRR 315


>gi|133917210|emb|CAJ77654.1| squalene synthase 1 [Glycyrrhiza eurycarpa]
          Length = 413

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/279 (10%), Positives = 73/279 (26%), Gaps = 18/279 (6%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQW 79
            F    L  +     L      P  R ++   Y     L  V D       +   + + +
Sbjct: 38  AFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAF 97

Query: 80  WKDIFESSTKGLIA--------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
            + I++                +     S   L + + Y    +     + A       +
Sbjct: 98  HRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELEKNYQAAIENITKRMGAGMAKFICN 157

Query: 132 SIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIH 189
            +     ++ Y   ++  +    + +  +      A   +    G+      +I      
Sbjct: 158 EVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLED 217

Query: 190 YH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
            +   + ++++P  I        E     +NS +    +       L +     + M  +
Sbjct: 218 INEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALLHAEDCLKYMSAL 277

Query: 247 LPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                     IP  +    L     +  ++        +
Sbjct: 278 RDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFGGVVKMRR 315


>gi|162463458|ref|NP_001104839.1| squalene synthase1 [Zea mays]
 gi|2463567|dbj|BAA22558.1| squalene synthase [Zea mays]
 gi|224031363|gb|ACN34757.1| unknown [Zea mays]
          Length = 401

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/280 (10%), Positives = 72/280 (25%), Gaps = 18/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQW 79
             F    L+ +     L      P  R ++   Y     L  V D    P   +   LQ 
Sbjct: 33  WAFAYSMLQKVSRSFALVIQQLGPELRNAVCIFYLVLRALDTVEDDTSIPTEVKVPILQE 92

Query: 80  WKDIFESSTKGLIAESIS---------PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +     +        +             S   L +   Y    +     + A       
Sbjct: 93  FYRHIYNRDWHYSCGTNHYKMLMDKFRHVSTAFLELGEGYQKAIEEVTRRMGAGMAKFIC 152

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
             +     ++ Y   ++  + +  + +  +      A   +    G+      +I     
Sbjct: 153 KEVETVDDYDEYCHYVAGLVGYGLSRLFYAAGTEDLALDSLSNSMGLFLQKTNIIRDYLE 212

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P +I        E F   +NS +    +       L +  +  + M  
Sbjct: 213 DINEIPKSRMFWPREIWSKYADKLEDFKYEENSKKAVQCLNNMVTDALIHAEECLQYMSA 272

Query: 246 I--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +          +   +        +
Sbjct: 273 LKDPAIFRFCAIPQIMAIGTC-ALCYNNVHVFRGVVKMRR 311


>gi|133917208|emb|CAJ77653.1| squalene synthase 2 [Glycyrrhiza uralensis]
          Length = 412

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 79/300 (26%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I       F    L  +            P  R ++   Y     L
Sbjct: 17  LLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGPDLRNAVCIFYLVLRAL 76

Query: 61  MRVRDTAR--NPITRDMRLQWWKDIFESSTKGLIA--------ESISPFSVELLSIVRQY 110
             V D       +   + + + + I++                +     S   L + + Y
Sbjct: 77  DTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  +      AS  
Sbjct: 137 QEAIEDITKRMGAGMARFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASGSEDLASDY 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P  I        E      NS +    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEDNSVKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +     + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTL-ALCYNNIELFRGVVKMRR 315


>gi|323337373|gb|EGA78626.1| Erg9p [Saccharomyces cerevisiae Vin13]
          Length = 431

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 81/298 (27%), Gaps = 26/298 (8%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
            L     L               P  R  ++  Y     L  + D        +   L+ 
Sbjct: 26  LLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRH 85

Query: 80  WKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           + +    +       +          +  SI+ ++      + ++I              
Sbjct: 86  FHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADY 145

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
             +++           ++ Y   ++  +       +      +E   ++ ++ +  G+  
Sbjct: 146 ILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFL 205

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P +I        + F+  +N       I       L ++ 
Sbjct: 206 QKXNIIRDYNEDLVDGRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVI 265

Query: 238 KAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                +  I          IP  +  + L     +  +++  +    +    + +L S
Sbjct: 266 DVLTYLASIHEQSTFQFCAIPQVMAIATL-ALVFNNREVLHGNVKIRKGTTCYLILKS 322


>gi|238880533|gb|EEQ44171.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 380

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/376 (14%), Positives = 114/376 (30%), Gaps = 91/376 (24%)

Query: 6   LTKNTRKEEKIFSRDSLFVL--------RNLRDIDYDRYLACLLSPPLYRISLSFLYYFH 57
           +T++    ++++S +   +L        + L   D   Y+     P   R +   +  F+
Sbjct: 2   ITRSRHISKRLYSTNYSAILFNAQENVNQLLESQDRSSYILAQYIPEPVRNTYLAIRAFN 61

Query: 58  TELMRVRDTARNPI-----------------TRDMRLQWWKDIFESSTKGLIAESIS--- 97
            E+ ++ ++  N                   T D++ ++W D+                 
Sbjct: 62  LEINKINESGSNVQSRAARASSQMSNTLGVSTADLKFKFWSDLILRVFTEDSRNETDLGE 121

Query: 98  PFSVELLSIV-RQYDLPNQYFLDMIEAHFFDS-YNDSIFDCKQFEHYAFRISSRLIHLAT 155
           P ++ L   +   ++L   YF   ++        N S         Y     S+L +L  
Sbjct: 122 PIAILLRDGLKHDFNLDISYFQQFLQTRRHFIKNNSSFQTVNDICSYGEGTFSQLNYLTQ 181

Query: 156 MI---------------LDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPL 199
            +                 +E  S    +  + G A  +  +I  +P +   R Q+  P+
Sbjct: 182 GLLLSPSISPSVIRLLEYSTELQSQMSDIAAHIGQATAVSSMILGVPFYAQSRNQITLPV 241

Query: 200 DILGAVGLDRESFLS------------GQNSDRISLAIKIFAELGLKY-------LFKAR 240
           D++ + GL +ES L              Q  + +   +   A     +       L  AR
Sbjct: 242 DLMTSSGLSQESLLRLFQGHIKDSAEENQIKEALKNVVYETAITANDHMLTAKSKLEMAR 301

Query: 241 EEMRYI---------------------LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
           +E++ I                        ++   +    T   L   +   F +     
Sbjct: 302 QEIKKIVQEQPQDQLLNKFSKKWRKGIPDSLYVPTMAGIPTSLFLNKLEKCNFDLFHGRL 361

Query: 280 TPNQLVRPWYMLSSSI 295
                 + W +   S 
Sbjct: 362 Q-----KEWRLPMKSF 372


>gi|189202916|ref|XP_001937794.1| squalene synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984893|gb|EDU50381.1| squalene synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 484

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 80/298 (26%), Gaps = 25/298 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             + E   S         L           L   P   + ++  Y     L  V D    
Sbjct: 31  HERNEAKESESLKRCFHFLNKTSRSFAAVILELHPDLLVPVTLFYLVLRGLDTVEDDMTI 90

Query: 70  PITRDM-RLQWWKDIFES----STKGLIAESISPFSVELLSIVRQY------------DL 112
           P+ +    L+ ++D+ E      T+    E      VE   ++ ++            D+
Sbjct: 91  PLAKKEPILRNFQDLLEQDGWNFTENGPNEKDRQLLVEFNVVIEEFKKIKPAYQEIIKDI 150

Query: 113 PNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA-----SL 167
             +    M +      +N  +   K +E Y   ++  +    T +      +        
Sbjct: 151 TKRMGNGMADYANNAEFNAGVDTIKDYELYCHYVAGLVGEGCTRLFVEAGLANAALLKKP 210

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
            +++  G       +   +      G+ ++P +I        E     +N  +       
Sbjct: 211 ELMESMGQFLQQVNITRDIKEDLDDGRRFWPREIWSKHVDKFEDLFKEENKQKALNCSSE 270

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQN--HGFKIVSHSHTPNQ 283
                L         +  +       F  +  T ++    +     + +   +    +
Sbjct: 271 MILTALTRADDCLYYLAGLREQSVFNFCAIPQTMAI-ATLETCFQNYALFQKNVKITK 327


>gi|169785549|ref|XP_001827235.1| squalene synthase [Aspergillus oryzae RIB40]
 gi|83775983|dbj|BAE66102.1| unnamed protein product [Aspergillus oryzae]
          Length = 470

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/299 (8%), Positives = 79/299 (26%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             +     +       + L               P   + +   Y     L  + D    
Sbjct: 30  HERNVNNETETQKACFKFLDLTSRSFSAVIKELHPELLLPVCVFYLVLRGLDTIEDDTSI 89

Query: 70  P-ITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMI--- 121
           P  T++  L+ +KD  E            E      V+  +++ ++      + +++   
Sbjct: 90  PLKTKEPMLREFKDYLEQDGWTFDGNRPEEKDRELLVQFHNVITEFKNMKPAYREIVKDI 149

Query: 122 -----EAHFFDSYNDSIF-----DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                                    ++++ Y + ++  +    T +     +     + +
Sbjct: 150 TDKMGNGMADYCRKAEFEDASVKTIEEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLSR 209

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   +   + ++P +I      + E     +N +       
Sbjct: 210 PRLHKSMGLFLQKTNIIRDVREDHDDDRHFWPKEIWSKYVTEFEDLFKPENRETALNCGS 269

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L++  +    +  +          IP ++  + L         +   +    +
Sbjct: 270 EMVLNALEHAEECLFYLAGLREQSVFNFCAIPQAMAIATL-ELCFRNPDMFDRNIKITK 327


>gi|296125938|ref|YP_003633190.1| squalene/phytoene synthase [Brachyspira murdochii DSM 12563]
 gi|296017754|gb|ADG70991.1| Squalene/phytoene synthase [Brachyspira murdochii DSM 12563]
          Length = 330

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 81/279 (29%), Gaps = 31/279 (11%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW- 80
            ++L  +        L   L     +  +   Y     +  + D++     ++  +  + 
Sbjct: 9   KYLLDLV---SRSFALTIPLLDKNKKNKVEVQYLLARIIDTIEDSSHTAQDKETLITGFI 65

Query: 81  -------KDIFESSTKGLIAESISP-----------FSVELLSIVRQYDLPNQYFLDMIE 122
                   D  E+  K +I  +I+                  +  ++    +  +L  + 
Sbjct: 66  NILKSENTDNLENFKKVVIDHTINENDKILIENIEVVLKAFFAFKQEIKNMSVSYLREMG 125

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLI-HLATMILDSERYSASLRVIKYAGIAQFIGQ 181
                  + +I   +  + Y + ++  +  +L  ++   +         K  G       
Sbjct: 126 YGMVYYQDHTISTFEDLDDYCYYVAGTVGVYLTELVKMLDNLELDREKAKSLGRFLQKVN 185

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           +I    I Y   ++++PL +          F  G   D+    +    E  +     + E
Sbjct: 186 IIKDAKIDYKEKRVFWPLTLFDNEN-PAPYFEDGAYMDKSMEILSKMIESAMHEFKNSIE 244

Query: 242 EMRYILPDV-----FPAFIPVSITESVLKHAQNHGFKIV 275
            +  I         F     +   E++      + + I 
Sbjct: 245 YIMTIEKKSLGYRHFCLLTTLMGYETI--KLMKNNYNIF 281


>gi|51701378|sp|O74165|FDFT_PICJA RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|3341974|dbj|BAA31938.1| squalene synthase [Pichia jadinii]
          Length = 443

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/328 (10%), Positives = 92/328 (28%), Gaps = 39/328 (11%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV-RD 65
            +N R      S + +     L               P  R  +   Y     L  V  D
Sbjct: 26  NENARNPATE-SAELIRCYELLNLTSRSFAAVIEELHPELRNVIMVFYLVLRALDTVEVD 84

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI 121
            +     +   L+ + +  ++        S +       VE   I+ QY      +  +I
Sbjct: 85  MSIENSVKLPVLRQFHEKLDTKDWTFDGNSPNEKDRCVLVEFDRILGQYHELKPQYQKVI 144

Query: 122 --------EAHFFDSYNDSIF-----DCKQFEHYAFRISSRLI-----HLATMILDSERY 163
                           N++         + ++ Y + ++  +       +      +   
Sbjct: 145 KEITEKMGNGMADYIENENFNSNGLLTIEDYDLYCYYVAGLVGDGLTQLIVLAKFGNSEL 204

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
           S + ++ K  G+      +I         G+ ++P +I G    +   F+  +N  +   
Sbjct: 205 SVNKQLFKSMGLFLQKTNIIRDYEEDQVDGRAFWPKEIWGKYANELSDFMKPENQSQGLW 264

Query: 224 AIKIFAELGLKYLFKAREEMRYILP--DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            I       L ++    + +  +          IP  +  + L+    +  ++++     
Sbjct: 265 CISELVCNALDHVIDVLQYLALVEEQTSFNFCAIPQVMAIATLELVFQNP-QVLTQHVKI 323

Query: 282 NQ---------LVRP---WYMLSSSIKK 297
            +                  +    ++K
Sbjct: 324 RKGTTVSLILESRTLEGCARIFRRYLRK 351


>gi|67633344|gb|AAY78595.1| predicted truncated phytoene synthase [uncultured bacterium
           MedeBAC82F10]
          Length = 166

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 2/137 (1%)

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
              ++      A+   +   GIA  +  +   +       ++Y P + L  + +++ +  
Sbjct: 1   MQPLILVNDKEANKHAVD-LGIAMQLTNIARDIYEDAAMNRVYLPKEWLKDISIEQLTNS 59

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGF 272
             Q   ++S+ IK   +L   Y       M+YI        F    I   +    +++ +
Sbjct: 60  IQQIQSQMSIIIKKLIDLSEVYYQNGFNGMKYIPIKTRLAIFFAAKIYRGIGMKIKSNQY 119

Query: 273 KIVSHSHTPNQLVRPWY 289
           +  +     N+  + W 
Sbjct: 120 QYSNKRVYLNKFNKLWV 136


>gi|303279484|ref|XP_003059035.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460195|gb|EEH57490.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 163

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 18/151 (11%)

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                + G A  +  L+     H  + + Y P+D+    G+  E    G +++ +  A+ 
Sbjct: 13  DHACAHLGKAIGVANLLRGTHAHSKQRRSYIPVDLCAKHGVSTEDVYRGNSTEALRNAVH 72

Query: 227 IFAELGLKYLFKAREEMRYILPD----------------VFPAFIPVSITESVLKHAQNH 270
             A   + +L  AR     I                        +P   T + L   +  
Sbjct: 73  EVASAAMAHLNTARGMRERIAAKCSRRVLSISRREDAATAAAVLLPAVGTGAYLDALEKR 132

Query: 271 GFKIVSHSHTPN--QLVRPWYMLSSSIKKRF 299
            F +           LV    +  ++ +  +
Sbjct: 133 DFDVFDPGLIRGTMPLVTQARIGWNAYRGTY 163


>gi|122138639|sp|Q32KR6|FDFT_BOVIN RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|81674847|gb|AAI09960.1| Farnesyl-diphosphate farnesyltransferase 1 [Bos taurus]
          Length = 417

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 74/293 (25%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            I R + L            W+          + E     S+E  ++  +Y         
Sbjct: 89  SIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDVCQ 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +      L           G
Sbjct: 149 KMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGIGLSRLFPASELEDPLIGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P +           F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQREGREFWPQETWSKYVKKLGDFAKPENIDLAVQCLNELITNTLH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVITYLSRLRNQSIFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|114623534|ref|XP_001141087.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 8
           [Pan troglodytes]
          Length = 468

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 76/290 (26%), Gaps = 18/290 (6%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +   S       + L                  R ++   Y     L  + D     + 
Sbjct: 83  PQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVE 142

Query: 73  RDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + + L            W+ +        + E     S+E  ++  +Y          + 
Sbjct: 143 KKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMG 202

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQ 177
               +  +  +   ++++ Y   ++  +    + +  +  +   L           G+  
Sbjct: 203 IGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFL 262

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P ++          F   +N D     +       L ++ 
Sbjct: 263 QKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIP 322

Query: 238 KAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 323 DVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 371


>gi|194388454|dbj|BAG60195.1| unnamed protein product [Homo sapiens]
 gi|221045752|dbj|BAH14553.1| unnamed protein product [Homo sapiens]
          Length = 474

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 76/290 (26%), Gaps = 18/290 (6%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            +   S       + L                  R ++   Y     L  + D     + 
Sbjct: 89  PQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVE 148

Query: 73  RDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + + L            W+ +        + E     S+E  ++  +Y          + 
Sbjct: 149 KKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMG 208

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQ 177
               +  +  +   ++++ Y   ++  +    + +  +  +   L           G+  
Sbjct: 209 IGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFL 268

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P ++          F   +N D     +       L ++ 
Sbjct: 269 QKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIP 328

Query: 238 KAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
                +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 329 DVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 377


>gi|61316445|ref|NP_001013022.1| squalene synthase [Bos taurus]
 gi|50841455|tpe|CAE48363.1| TPA: FDFT1 protein [Bos taurus]
 gi|296484951|gb|DAA27066.1| squalene synthetase [Bos taurus]
          Length = 417

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 74/293 (25%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            I R + L            W+          + E     S+E  ++  +Y         
Sbjct: 89  SIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDVCQ 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +      L           G
Sbjct: 149 KMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGIGLSRLFSASELEDPLIGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P +           F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQREGREFWPQETWSKYVKKLGDFAKPENIDLAVQCLNELITNTLH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVITYLSRLRNQSIFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|302924433|ref|XP_003053888.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734829|gb|EEU48175.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 462

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/297 (9%), Positives = 84/297 (28%), Gaps = 24/297 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +++    S +     R L                   + ++  Y     L  + D    
Sbjct: 27  HKRDPSTESPELQECFRYLNMTSRSFAAVIQELNHELLVPITLFYLVLRGLDTIEDDMTL 86

Query: 70  PITRDMRL--QWWKDIFESSTKGLIAESISPFSVELLSIV---------RQYDLPNQYFL 118
           P+ + + L  ++   + +   +   ++      +E   +V         + Y++     +
Sbjct: 87  PLDKKVPLLREFHNTMEQDGWQFHESQEKDKELLEHFDVVITELKKIKPQYYEIIKDMTI 146

Query: 119 DMIEAHFFDSYNDSI-----FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-- 171
            M       + N  +         ++E Y   ++  +    T +  +   +      +  
Sbjct: 147 KMGNGMADYAQNTEMIENGVQTIDEYELYCHYVAGLVGEGLTRLFVASELANPKLAERPS 206

Query: 172 ---YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G       +I  +   +  G+ ++P +I        E     +   +    +   
Sbjct: 207 LTESMGQFLQKTNIIRDIHEDWEDGRRWYPKEIWSKHVDKWEDLFDPKQRTKAIECVSEM 266

Query: 229 AELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               LK+  +    M  I          IP  +  + L+    +   ++  +    +
Sbjct: 267 VLDALKHSEECLFYMAGIKDQSVFNFVAIPQGMAIATLELVFRNP-NVLERNVKITK 322


>gi|85094080|ref|XP_959817.1| squalene synthetase [Neurospora crassa OR74A]
 gi|51701416|sp|Q7S4Z6|FDFT_NEUCR RecName: Full=Probable squalene synthase; Short=SQS; Short=SS;
           AltName: Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|28921272|gb|EAA30581.1| squalene synthetase [Neurospora crassa OR74A]
          Length = 481

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 81/299 (27%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            R++    +       R+L               P   + +   Y     L  + D    
Sbjct: 31  HRRDPSKETETEKACFRHLELTSRSFSAVIQELNPELLMPICLFYLVLRGLDTIEDDMTI 90

Query: 69  NPITRDMRLQWWKDIFE----SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +   ++  L+ + D+ E    + T+    E      V    ++ +     + + D+I   
Sbjct: 91  DLAKKEPLLREFADLMEIDGWTFTENGPNEKDRELLVHFDDVIAELKKVKKPYYDIIREI 150

Query: 125 FFDSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                N                   +++E Y   ++  +    T +      +    + +
Sbjct: 151 TVKMGNGMADYALNAEHNTNGVNTIEEYELYCHYVAGLVGEGLTRLFVESNLANPALLER 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G       +I  +   Y   + ++P  I        +     +N ++      
Sbjct: 211 MELTESMGQFLQKTNIIRDIHEDYVDKRRFWPKTIWSKYVNTWDDMFKPENREKALQCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 LK+       M  +          IP ++  + L+    +   I   +    +
Sbjct: 271 EMVLNALKHTEDCLFYMAGMRDQSVFNFVAIPQAMAIATLELVFRNPA-IFERNVKITK 328


>gi|172058463|ref|YP_001814923.1| squalene/phytoene synthase [Exiguobacterium sibiricum 255-15]
 gi|171990984|gb|ACB61906.1| Squalene/phytoene synthase [Exiguobacterium sibiricum 255-15]
          Length = 274

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 78/305 (25%), Gaps = 51/305 (16%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD------ 65
            E K   +D+    R L+      Y+         + ++   Y     +  + D      
Sbjct: 2   NETKQLKKDAN---RVLKATSRTFYIPISRLSQELQEAVGAAYLCMRAIDEIEDHEELPT 58

Query: 66  TARNPITRDMRLQWWKDIFESSTKGLIAESIS---PFSVELLSIVRQYDLPNQ-----YF 117
             +  + R+  L         + + +IA+        ++ L   +       +       
Sbjct: 59  EVKTTLLRETALMMRGTFDAHAYQAMIADYADQLPEVTLRLAEWIAYCPAGIRAKVLDST 118

Query: 118 LDMIEAHFFDSYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGI 175
            +M E     +  D  +      + Y + ++  +  + + I           +     G 
Sbjct: 119 AEMAEGMATWAERDWTVKTEADLDEYTYYVAGLVGVMLSDIWYWKAGIVTDKQQAIGFGR 178

Query: 176 AQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKY 235
                 ++        RG  YFP                               E   + 
Sbjct: 179 GLQAVNILRNQQEDAERGVGYFPPGWTTE----------------------TMFEYAREN 216

Query: 236 LFKAREEMRYILPDVF---PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           L +A   +  I           IP+++    L                 ++      + S
Sbjct: 217 LAEADAYLASIPKQTTIYEFCKIPLALAHGTLDALAK-------GKEKLSRPEVLKIVGS 269

Query: 293 SSIKK 297
           + +K+
Sbjct: 270 AVLKR 274


>gi|33465823|gb|AAO47570.1| phytoene-beta carotene synthase [Xanthophyllomyces dendrorhous]
 gi|63145973|gb|AAY33923.1| phytoene-beta carotene synthase [Xanthophyllomyces dendrorhous]
          Length = 673

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/392 (10%), Positives = 82/392 (20%), Gaps = 105/392 (26%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F +      +    RD    ++ L +     ++A    P   R  L  LY F      + 
Sbjct: 284 FFSSRPYSSQP--KRDLELAVKLLEEKSRSFFVASAGFPSEVRERLVGLYAFCRVTDDLI 341

Query: 65  DTARNPITRDMRLQWWKDIF-------------ESSTKGLIAESISP------------- 98
           D+          +    D               +      +     P             
Sbjct: 342 DSPEVSSNPHATIDMVSDFLTLLFGPPLHPSQPDKILSSPLLPPSHPSRPTGMYPLPPPP 401

Query: 99  ------------------------FSVELLSIVRQYDLP---NQYFLDMI---EAHFFDS 128
                                      +L  ++ +Y L      Y  D+I         +
Sbjct: 402 SLSPAELVQFLTERVPVQYHFAFRLLAKLQGLIPRYPLDELLRGYTTDLIFPLSTEAVQA 461

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILD----------SERYSASLRVIKYAGIAQF 178
               I        Y   ++  +  L   +             E   A L   +  G A  
Sbjct: 462 RKTPIETTADLLDYGLCVAGSVAELLVYVSWASAPSQVPATIEEREAVLVASREMGTALQ 521

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRE-------SFLSGQNSD------------ 219
           +  +   +      G+ Y P   L   GL  E        +   +  D            
Sbjct: 522 LVNIARDIKGDATEGRFYLP---LSFFGLRDESKLAIPTDWTEPRPQDFDKLLSLSPSST 578

Query: 220 ------------RISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKH 266
                                          + + +  +  +V        +    + + 
Sbjct: 579 LPSSNASESFRFEWKTYSLPLVAYAEDLAKHSYKGIDRLPTEVQAGMRAACASYLLIGRE 638

Query: 267 AQNH-GFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +      +     T     R   +LS  +  
Sbjct: 639 IKVVWKGDVGERR-TVAGWRRVRKVLSVVMSG 669


>gi|33465821|gb|AAO73816.1| crtYB [Xanthophyllomyces dendrorhous]
          Length = 645

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/392 (10%), Positives = 82/392 (20%), Gaps = 105/392 (26%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F +      +    RD    ++ L +     ++A    P   R  L  LY F      + 
Sbjct: 256 FFSSRPYSSQP--KRDLELAVKLLEEKSRSFFVASAGFPSEVRERLVGLYAFCRVTDDLI 313

Query: 65  DTARNPITRDMRLQWWKDIF-------------ESSTKGLIAESISP------------- 98
           D+          +    D               +      +     P             
Sbjct: 314 DSPEVSSNPHATIDMVSDFLTLLFGPPLHPSQPDKILSSPLLPPSHPSRPTGMYPLPPPP 373

Query: 99  ------------------------FSVELLSIVRQYDLP---NQYFLDMI---EAHFFDS 128
                                      +L  ++ +Y L      Y  D+I         +
Sbjct: 374 SLSPAELVQFLTERVPVQYHFAFRLLAKLQGLIPRYPLDELLRGYTTDLIFPLSTEAVQA 433

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILD----------SERYSASLRVIKYAGIAQF 178
               I        Y   ++  +  L   +             E   A L   +  G A  
Sbjct: 434 RKTPIETTADLLDYGLCVAGSVAELLVYVSWASAPSQVPATIEEREAVLVASREMGTALQ 493

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRE-------SFLSGQNSD------------ 219
           +  +   +      G+ Y P   L   GL  E        +   +  D            
Sbjct: 494 LVNIARDIKGDATEGRFYLP---LSFFGLRDESKLAIPTDWTEPRPQDFDKLLSLSPSST 550

Query: 220 ------------RISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV-SITESVLKH 266
                                          + + +  +  +V        +    + + 
Sbjct: 551 LPSSNASESFRFEWKTYSLPLVAYAEDLAKHSYKGIDRLPTEVQAGMRAACASYLLIGRE 610

Query: 267 AQNH-GFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            +      +     T     R   +LS  +  
Sbjct: 611 IKVVWKGDVGERR-TVAGWRRVRKVLSVVMSG 641


>gi|187424525|gb|ACD03847.1| squalene synthase [Saccharomyces cerevisiae]
          Length = 444

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 81/298 (27%), Gaps = 26/298 (8%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
            L     L               P  R  ++  Y     L  + D        +   L+ 
Sbjct: 39  LLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRH 98

Query: 80  WKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           + +    +       +          +  SI+ ++      + ++I              
Sbjct: 99  FHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADY 158

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
             +++           ++ Y   ++  +       +      +E   ++ ++ +  G+  
Sbjct: 159 ILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFL 218

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P +I        + F+  +N       I       L ++ 
Sbjct: 219 QKTNIIRDYNEDLVDGRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVI 278

Query: 238 KAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
                +  I          IP  +  + L     +  +++  +    +    + +L S
Sbjct: 279 DVLTYLAGIHEQSTFQFCAIPQVMAIATL-VLVFNNREVLHGNVKIRKGTTCYLILKS 335


>gi|68474787|ref|XP_718601.1| hypothetical protein CaO19.10036 [Candida albicans SC5314]
 gi|68474954|ref|XP_718518.1| hypothetical protein CaO19.2500 [Candida albicans SC5314]
 gi|46440289|gb|EAK99597.1| hypothetical protein CaO19.2500 [Candida albicans SC5314]
 gi|46440378|gb|EAK99685.1| hypothetical protein CaO19.10036 [Candida albicans SC5314]
          Length = 380

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/376 (14%), Positives = 113/376 (30%), Gaps = 91/376 (24%)

Query: 6   LTKNTRKEEKIFSRDSLFVL--------RNLRDIDYDRYLACLLSPPLYRISLSFLYYFH 57
           +T++    ++++S +   +L        + L   D   Y+     P   R +   +  F+
Sbjct: 2   ITRSRHISKRLYSTNYSAILFNAQENVNQLLESQDRSSYILAQYIPEPVRNTYLAIRAFN 61

Query: 58  TELMRVRDTARNPI-----------------TRDMRLQWWKDIFESSTKGLIAESIS--- 97
            E+ ++ +   N                   T D++ ++W D+                 
Sbjct: 62  LEINKINEGGSNVQSRAARASSQMSNTLGVSTADLKFKFWSDLILRVFTEDSRNETDLGE 121

Query: 98  PFSVELLSIV-RQYDLPNQYFLDMIEAHFFDS-YNDSIFDCKQFEHYAFRISSRLIHLAT 155
           P ++ L   +   ++L   YF   ++        N S         Y     S+L +L  
Sbjct: 122 PIAILLRDGLKHDFNLNISYFQQFLQTRRHFIKNNSSFQTVNDICSYGEGTFSQLNYLTQ 181

Query: 156 MI---------------LDSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPL 199
            +                 +E  S    +  + G A  +  +I  +P +   R Q+  P+
Sbjct: 182 GLLLSPSISPSVIRLLEYSTELQSQMSDIAAHIGQATAVSSMILGVPFYAQSRNQITLPV 241

Query: 200 DILGAVGLDRESFLS------------GQNSDRISLAIKIFAELGLKY-------LFKAR 240
           D++ + GL +ES L              Q  + +   +   A     +       L  AR
Sbjct: 242 DLMTSSGLSQESLLRLFQGHIKDSAEENQIKEALKNVVYETAITANDHMLTAKSKLEMAR 301

Query: 241 EEMRYI---------------------LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
           +E++ I                        ++   +    T   L   +   F +     
Sbjct: 302 QEIKKIVQEQPQDQLLNKFSKKWRKGIPDSLYVPTMAGIPTSLFLNKLERCNFDLFHGRL 361

Query: 280 TPNQLVRPWYMLSSSI 295
                 + W +   S 
Sbjct: 362 Q-----KEWRLPMKSF 372


>gi|330821919|ref|YP_004350781.1| Squalene/phytoene synthase family protein [Burkholderia gladioli
           BSR3]
 gi|327373914|gb|AEA65269.1| Squalene/phytoene synthase family protein [Burkholderia gladioli
           BSR3]
          Length = 356

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 48/304 (15%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK----- 81
            L+ +    YL   + P   R  +   Y        + DT  + +    RL+W       
Sbjct: 13  LLKGVSRSFYLTLAVLPVGMRDPIGLAYLLARAADTIADT--SLLPPARRLEWLLSLRAQ 70

Query: 82  ----------DIFESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFF 126
                         +   G   +S     +      L  + +  D        ++     
Sbjct: 71  VNGRPDEAALRSIAAEVAGQQTDSDEKVLLESLGPALGILAQLDDADRAAVRGIVTTLSE 130

Query: 127 DSYND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-- 171
               D             ++ D    + Y + ++  +    T +          R     
Sbjct: 131 GMEFDLVTFPDETSGQLVALPDDAALDRYTYMVAGCVGEFWTTMTFLHEPGVVKRDADEM 190

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G A  +  ++         G+ Y P D L    +     L    S      + 
Sbjct: 191 KALGIRFGKALQLTNVLRDAAKDLRIGRCYLPADRLARGRIAPGDLLGQDASQLARPVMF 250

Query: 227 IFAELGLKYLFKAREEMRYILPDV----FPAFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
               + L +     +    I P           P+ I    L+   ++   I       +
Sbjct: 251 DLVRVALAHYRAGIDYTFAIPPRAMRLRLACIWPIVIGLMTLRLLVSNPKWIEPGRA--S 308

Query: 283 QLVR 286
           ++ R
Sbjct: 309 KVRR 312


>gi|330929033|ref|XP_003302494.1| hypothetical protein PTT_14326 [Pyrenophora teres f. teres 0-1]
 gi|311322124|gb|EFQ89410.1| hypothetical protein PTT_14326 [Pyrenophora teres f. teres 0-1]
          Length = 484

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 78/298 (26%), Gaps = 25/298 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             + E   S         L           L   P   + ++  Y     L  V D    
Sbjct: 31  HERNEAKESESLKRCFHFLNKTSRSFAAVILELHPDLLVPVTLFYLILRGLDTVEDDMTI 90

Query: 70  PITRDM-RLQWWKDIFES----STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P+ +    L+ ++D+ E      T+    E      VE   ++ ++      + D+I+  
Sbjct: 91  PLAKKEPILRNFQDLLEQDGWNFTENGPNEKDRQLLVEFNVVIEEFKKIKPAYQDIIKDI 150

Query: 125 FFDSYNDSIF------------DCKQFEHYAFRISSRLIHLATMILDSERYSA-----SL 167
                N                  K +E Y   ++  +    T +      +        
Sbjct: 151 TKRMGNGMADYANNAEFNAGVNTIKDYELYCHYVAGLVGEGCTRLFVEAGLANAALLKRP 210

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
            +++  G       +   +      G+ ++P +I        E     +N  +       
Sbjct: 211 ELMESMGQFLQQVNITRDIKEDLDDGRRFWPREIWSKHVDKFEDLFKEENKQKALNCSSE 270

Query: 228 FAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQN--HGFKIVSHSHTPNQ 283
                L         +  +       F  +  T ++    +     + +   +    +
Sbjct: 271 MILTALTRADDCLYYLAGLREQSVFNFCAIPQTMAI-ATLETCFQNYALFQKNVKITK 327


>gi|126135220|ref|XP_001384134.1| farnesyl-diphosphate farnesyltransferase [Scheffersomyces stipitis
           CBS 6054]
 gi|126091332|gb|ABN66105.1| farnesyl-diphosphate farnesyltransferase [Scheffersomyces stipitis
           CBS 6054]
          Length = 448

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 78/292 (26%), Gaps = 30/292 (10%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
                  L               P  R ++   Y     L  + D    +P  +   L+ 
Sbjct: 39  LKRCYYLLNQTSRSFAAVIKELHPEIRDAIMLFYLVLRALDTIEDDMTLDPGFKVPLLRS 98

Query: 80  WKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           + D               E      VE   ++ +Y      + D+I              
Sbjct: 99  FDDKLNEIDWTFNGSGPDEQDRIVLVEFDQVLTEYHKLKPEYQDIIKDITKKMGNGMADY 158

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------YAGIA 176
             +D+           ++ Y   ++  +    T  +   ++S    V          G+ 
Sbjct: 159 ILDDNFNLNGVETVADYDLYCHYVAGLVGEGLTKFMVLAKFSDDSLVADGFVKSNSMGLF 218

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL---AIKIFAELGL 233
                +I         G+ ++P ++         SF    +S+  +     I       L
Sbjct: 219 LQKTNIIRDYHEDLEDGRSFWPKEVWSKYTDALPSFHKDTSSESEAQGLSCISELVLNSL 278

Query: 234 KYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            ++    E +  +          IP  +  + L    N+  K++  +    +
Sbjct: 279 GHVKHVLEFLSLVKDPSSFNFCAIPQVMAIATLATVYNNP-KVLHSNVKIRK 329


>gi|89266417|gb|ABD65500.1| hypothetical protein [Ictalurus punctatus]
          Length = 112

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%)

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
            H  R ++Y P+DI    G  +E F+ G     +   +   A     +L  AR   + + 
Sbjct: 1   YHSRRRRVYLPMDICMLHGTSQEDFIRGSWKQNVRDVVYDIASQAHVHLQHARSFNKNVP 60

Query: 248 PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
               PAF+     +  L+  +   F +   S      + P  +   S KK++
Sbjct: 61  DAAMPAFLQTVAIDDYLERVRKVDFDVFHPSLQRRNPLMPIQLYFRSWKKKY 112


>gi|148688708|gb|EDL20655.1| mCG10034 [Mus musculus]
          Length = 376

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/294 (8%), Positives = 73/294 (24%), Gaps = 35/294 (11%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            S       + L                  R ++   Y     L  V D     + + + 
Sbjct: 35  LSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAICVFYLVLRALDTVEDDMSISVEKKIP 94

Query: 77  LQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           L            W+          + E     S+E  ++  +Y          +     
Sbjct: 95  LLCNFHTFLYDPEWRFTESKEKVRQVLEDFPTISLEFRNLAEKYQTVIDDICHRMGCGMA 154

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS-----LRVIKYAGIAQFIGQ 181
           +  +  +   + ++ Y   ++  +    + +  +  +        +      G+      
Sbjct: 155 EFVDKGVTSKQDWDKYCHYVAGLVGIGLSCLFSASEFEDPIVGEDIECANSMGLFLQKTN 214

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           +I         G+ ++P ++ G   +  E F   +N D     +       L+++     
Sbjct: 215 IIRDYLEDQQEGRKFWPREVWGRY-IKLEDFAKPENVDVALQCLNELITNALQHIPDILT 273

Query: 242 EMRYI----------LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            +  +          +P         +           +  ++        +  
Sbjct: 274 YLSRLWNQSVFNFCAIPQAMAIATLAACY---------NNQQVFRGIVKIRKGQ 318


>gi|145588377|ref|YP_001154974.1| squalene/phytoene synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046783|gb|ABP33410.1| farnesyl-diphosphate farnesyltransferase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 329

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/311 (9%), Positives = 72/311 (23%), Gaps = 59/311 (18%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
             D  +    L  +     L   L PP   I +   Y     +  + D A  +P  +   
Sbjct: 13  ESDLSYQKAILGSVSRTFALTIPLLPPDIEIVVGNTYLLCRIVDTIEDAADLSPQIKQDL 72

Query: 77  LQWWKDI--------------FESSTKGLIAESIS------PFSVELLSIVRQYDLPNQY 116
            + + D                        ++ +            L +           
Sbjct: 73  SKLFLDAVLEKSPVETFVEPCLTHLRHYGNSDELDLIANTPTVLRILHTCSANDQAAVSR 132

Query: 117 FLDMIEAHFFDSYNDSIF----DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY 172
            + ++       +         +  +FE Y + ++  +  L T I  +   + +  ++ +
Sbjct: 133 CVSIMSEGMSRFHGKQNEAGLKNLTEFEEYCYVVAGVVGELLTTIFSNHSQAFTKNIVGH 192

Query: 173 ------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G A  +  ++   P    RG  + P ++                         
Sbjct: 193 EELAIAFGQALQMTNILKDSPEDKARGVSWKPANMSQ----------------------T 230

Query: 227 IFAELGLKYLFKAREEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
               +    L  +   +  I           F+   +    L           +      
Sbjct: 231 TLLAIAYDKLKDSLNYILLIPKTDLGMRRFCFLAFGLAVMTLSKIAKRDK--FNCKDEVK 288

Query: 283 QLVRPWYMLSS 293
              +      +
Sbjct: 289 LSRKSVMAFYA 299


>gi|238883734|gb|EEQ47372.1| squalene synthetase [Candida albicans WO-1]
          Length = 448

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/295 (10%), Positives = 76/295 (25%), Gaps = 30/295 (10%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMR 76
             + +     L               P  R ++   Y     L  + D        +   
Sbjct: 36  DEELVRCYELLNLTSRSFAAVIEELHPELRDAVMIFYLVLRALDTIEDDMTIKSSIKIPL 95

Query: 77  LQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS---- 128
           L+ +     +           E      VE   I+  Y      + D+I++  F      
Sbjct: 96  LREFDTKLNTKNWTFDGNGPNEKDRTVLVEFDKILNVYHRLKPQYQDIIKSITFKMGNGM 155

Query: 129 ---------YNDSIFDCKQFEHYAFRISSRLI------HLATMILDSERYSASLRVIKYA 173
                      + +   + +  Y   ++  +        +     D      +       
Sbjct: 156 ADYILDEEFNVNGVATVEDYNLYCHYVAGLVGEGLTNLFVLANFGDKTLTENNFAKADSM 215

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRIS--LAIKIFAE 230
           G+      +I         G+ ++P +I      + + F      +   +    I     
Sbjct: 216 GLFLQKTNIIRDYHEDLQDGRSFWPREIWSKYTENLQDFHKVKTPAKEFAGVSCINELVL 275

Query: 231 LGLKYLFKAREEMRYI-LPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             L ++    + +  +  P  F    IP  +  + L    N+  K++       +
Sbjct: 276 NALGHVTDCLDYLSLVKDPSSFSFCAIPQVMAVATLAEVYNNP-KVLHGVVKIRK 329


>gi|20976923|gb|AAM27472.1| squalene synthase [Nicotiana tabacum]
          Length = 290

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 64/251 (25%), Gaps = 17/251 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL----- 77
           F    L  +     L     P   R ++   Y     L  V D    P    + +     
Sbjct: 39  FCYSMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFH 98

Query: 78  -----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                + W     +    ++ +     S   L + + Y    +     + A         
Sbjct: 99  QHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y    +  +    + +  +      AS  +    G+      +I       
Sbjct: 159 VETTDDYDEYCHYEAGLVGLGLSKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 HRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +      +++P +I        E      NS +    +       L ++      M  + 
Sbjct: 219 NEVPKCRMFWPREIWSKYVNKLEELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALR 278

Query: 247 -LPDVFPAFIP 256
                    IP
Sbjct: 279 DPSIFRFCAIP 289


>gi|326428914|gb|EGD74484.1| farnesyl-diphosphate farnesyltransferase 1 [Salpingoeca sp. ATCC
           50818]
          Length = 429

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/293 (8%), Positives = 76/293 (25%), Gaps = 25/293 (8%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ- 78
           D                          R ++S  Y     L  V D          +L  
Sbjct: 46  DYYLC-----RTSRSFSAVIRALDAELRPAISIFYLVLRGLDTVEDDMSLDKKLKHKLLT 100

Query: 79  -WWKDIFESSTKGLIAESI----------SPFSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
            + + +++       +                + E L++ +++ +        +     +
Sbjct: 101 TFHEKLYDPQWNFDGSGPNEKDRDLLVEFHVVTQEFLALDKKFQVVIADICKRMGHGMAE 160

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-----AGIAQFIGQL 182
             + ++     +  Y   ++  +    + +  +    ++   +        G+      +
Sbjct: 161 FIDKTVETVDDYNLYCHYVAGLVGIGLSKLFSASGLESAEVGVDEERANSMGLFLQKTNI 220

Query: 183 ICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
           I         G+ ++P  +    G     F S          +       L+++      
Sbjct: 221 IRDYLEDLEEGRTWWPRQVWSLYGTKLSDFASPDCEAGGLACLNHLVADALQHVPDCFVY 280

Query: 243 MRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           M  +          IP  +  + L     +  +++  +    +      M+ +
Sbjct: 281 MSRLRTQSVFNFCAIPQVMAIATLD-LCYNNKQVLKRNVKIRKGTAVSLMMKA 332


>gi|254570987|ref|XP_002492603.1| hypothetical protein [Pichia pastoris GS115]
 gi|238032401|emb|CAY70424.1| Hypothetical protein PAS_chr3_0379 [Pichia pastoris GS115]
          Length = 388

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 108/345 (31%), Gaps = 71/345 (20%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR---------- 73
               L   D   YL     P   R +   +  F  E+ ++ D+     ++          
Sbjct: 42  CTEMLNKFDKSSYLLAHYIPEPARDTWMAIRCFLLEVNKISDSNTRANSQFRANVGVGLL 101

Query: 74  DMRLQWWKDIFESSTKGLIAES-ISPFSVELLSIV-RQYDLPNQYFLDMIEAHFFDSYND 131
           D++ ++W+++ +    G   +    P +  L   + ++ +L    F  ++ +      N 
Sbjct: 102 DVKFKFWEELLQKVFLGGYQKPLGEPVATLLRDGINKELNLDIGMFQQILTSRLHYLKNT 161

Query: 132 S---IFDCKQFEHYAFRISSRLIHLATMILDSERYSASL---------------RVIKYA 173
           S     +  +   Y   I S+  +L   +L S   S S                 V  + 
Sbjct: 162 SKLGFKNMDEVCSYGEGIYSQSNYLTQRLLLSPNISPSAVELLEQAPFLETNLTEVAAHL 221

Query: 174 GIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLS-----------GQNSDRI 221
           G A  +  ++  L  +   +  +  PLD++    L +E  L             + SD++
Sbjct: 222 GQATGVATMLIGLKYYATTQNHIPLPLDLMAKHDLSQEQLLRLFHGYLEGSDLARASDQL 281

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILPD----------------VFP------------- 252
           S  +   A     ++  AR++   +  D                                
Sbjct: 282 SNVVFDVATTANDHILTARQKFDQLKQDICQVLDVDQAHNEFLQSRAQNWTKKVPDVLYV 341

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            F+    T+  L   + + F I + +         W   S+  ++
Sbjct: 342 PFMSSIPTQLYLSKLEKYNFDINNGNLQSKDWKLAWKSYSNYSRR 386


>gi|3686|emb|CAA42583.1| farnesyl-diphosphate farnesyltransferase [Saccharomyces cerevisiae]
          Length = 444

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/288 (9%), Positives = 76/288 (26%), Gaps = 26/288 (9%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
            L     L               P  R  ++  Y     L  + D        +   L+ 
Sbjct: 39  LLHCFELLNFTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRH 98

Query: 80  WKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           + +    +       +          +  SI+ ++      + ++I              
Sbjct: 99  FHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADY 158

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
             +++           ++ Y   ++  +       +      +E   ++ ++ +  G+  
Sbjct: 159 ILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFL 218

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               +I         G+ ++P +I        + F+  +N       I       L ++ 
Sbjct: 219 QKTNIIRDYNEDLVDGRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSHVI 278

Query: 238 KAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                +  I          IP  +  + L     +  +++       +
Sbjct: 279 DVLTYLAGIHEQSTFQFCAIPQVMAIATL-ALVFNNREVLHGDVKIRK 325


>gi|297181710|gb|ADI17892.1| phytoene/squalene synthetase [uncultured Chloroflexi bacterium
           HF0200_06I16]
          Length = 317

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 70/269 (26%), Gaps = 43/269 (15%)

Query: 46  YRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD------------IFESSTKGLIA 93
            R  +   Y        + D       R   L   +                S      A
Sbjct: 1   MRKPVGLAYLLARAADTIADHHWPTQQRQKTLDDLRFFQSQVKVLNDLPNIRSLVSRYTA 60

Query: 94  ESISPFSVELLSIVRQYDL-----------PNQYFLDMIEAHFFDSYNDSIF-------- 134
           +S    S    S++  + L             +    +++    D               
Sbjct: 61  DSSEDESAVFCSLIDAFALLEALGKEDQILVREVVSTLVQGMDMDLNVFPAEDTDGLVAL 120

Query: 135 -DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-------YAGIAQFIGQLICQL 186
              +  + Y + ++  +    T I     +S     ++         G A  +  ++  +
Sbjct: 121 STKEDLDRYTYLVAGCVGEFWTRIAVGSEFSLKEWDVEKMSGIGVRFGKALQLTNILRDI 180

Query: 187 PIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                 G+ Y P D L   GL  E  L   N  R       + E+ L++   A E +  I
Sbjct: 181 SSDLRIGRCYLPADELSVAGLAPEDLLLSVNEYRAKAVFIPWMEIALEHFQAAEEYLTTI 240

Query: 247 LPDV----FPAFIPVSITESVLKHAQNHG 271
                        P+ +  + L      G
Sbjct: 241 PRRSVRLRLACLWPLLLGLATLVRLAESG 269


>gi|238025460|ref|YP_002909692.1| Squalene/phytoene synthase family protein [Burkholderia glumae
           BGR1]
 gi|237880125|gb|ACR32457.1| Squalene/phytoene synthase family protein [Burkholderia glumae
           BGR1]
          Length = 356

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 66/270 (24%), Gaps = 38/270 (14%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDI-- 83
            L+ +    YL   + P   R  +   Y        + D +   P  R   L   ++   
Sbjct: 13  LLKGVSRSFYLTLAVLPAGMRDPIGLAYLLARAADTIADTSLLPPARRLEWLLSLREQVN 72

Query: 84  ----------FESSTKGLIAESISPFSV-----ELLSIVRQYDLPNQYFLDMIEAHFFDS 128
                       +       ES     +      L  + +  +        ++       
Sbjct: 73  GTPDPAALRTIAAEVASQQTESDENVLLESLGPALAILAQLDETDRAAVRGIVTTLTQGM 132

Query: 129 YND-------------SIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---- 171
             D             ++ D    + Y + ++  +    T +  + +     R       
Sbjct: 133 EFDLVTFPDETSGQHAALPDGAALDRYTYLVAGCVGEFWTTMTLAHQPGVLQRDADTMKA 192

Query: 172 ---YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G A  +  ++         G+ Y P D L    +     L    S      +   
Sbjct: 193 LGIRFGKALQLTNVLRDAAKDLRIGRCYLPADRLMRERIAPADLLGSDASRLARPVMLEL 252

Query: 229 AELGLKYLFKAREEMRYILPDVFPAFIPVS 258
             + L +   A +    I P      +   
Sbjct: 253 VRVALGHFRAAIDYTFAIPPTAMRLRLACI 282


>gi|289614619|emb|CBI58608.1| unnamed protein product [Sordaria macrospora]
          Length = 484

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 83/299 (27%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            +++    +       R+L               P   + +   Y     L  + D    
Sbjct: 31  HKRDPSKETETEKACFRHLELTSRSFSAVIQELNPELLMPICLFYLVLRGLDTIEDDMTI 90

Query: 69  NPITRDMRLQWWKDIFE----SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +   ++  L+ + D+ E    + T+    E      V    ++ +     + + D+I   
Sbjct: 91  DLAKKEPLLRGFADLMEIDGWTFTENGPNEKDRELLVHFDDVISELKKVKKPYYDIIREI 150

Query: 125 FFDSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                N                   +++E Y   ++  +    T +      +    + +
Sbjct: 151 TVKMGNGMADYALNAEHNTNGVNTIEEYELYCHYVAGLVGEGLTRLFVESDLANPALLER 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G       +I  +   +   + ++P  I      + E     +N ++      
Sbjct: 211 MELTESMGQFLQKTNIIRDIHEDFVDKRRFWPKTIWSKYVNNWEDMFKLENREKALQCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 LK+  +    M  I          IP ++  + L+    +   I   +    +
Sbjct: 271 EMVLNALKHTEECLFYMAGIRDQSVFNFVAIPQAMAIATLELVFRNPA-IFERNVKITK 328


>gi|206573500|gb|ACI14294.1| squalene synthase [Linum usitatissimum]
          Length = 271

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/259 (10%), Positives = 63/259 (24%), Gaps = 17/259 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWK 81
           F    L  +     L         R ++   Y     L  V D        +   L  + 
Sbjct: 13  FCYTMLLKVSRSFALVIQQLGTELRDAVCIFYLVLRALDTVEDDTSIATEVKVPILNDFH 72

Query: 82  DIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                                +     S   L + R Y    +     +           
Sbjct: 73  RHIYDQEWHFSCGTKDYKVLMDEFHHVSTAFLELGRGYQEAIEDITKRMGDGMAKFILKE 132

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +      A   +    G+      +I       
Sbjct: 133 VESLDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDDLSNSMGLFLQKTNIIRDYLEDI 192

Query: 191 H---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +   + ++++P +I        E     +NS +    +       L ++    + +  + 
Sbjct: 193 NEIPKSRMFWPREIWSKYVSKLEDLKYEENSVKAVQCLNDMVTNALIHMDDCVKYLSALR 252

Query: 247 -LPDVFPAFIPVSITESVL 264
                    IP  +    L
Sbjct: 253 DPAIFRFCAIPQIMAIGTL 271


>gi|171680817|ref|XP_001905353.1| hypothetical protein [Podospora anserina S mat+]
 gi|170940036|emb|CAP65262.1| unnamed protein product [Podospora anserina S mat+]
          Length = 468

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 81/299 (27%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            R++    +         L+              P   + +   Y     L  + D    
Sbjct: 31  HRRDASKETPTEKSCFHFLKLTSRSFSAVIQELNPELLMPICLFYLVLRGLDTIEDDMTL 90

Query: 69  NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +   ++  L+ + +I E            E      V    I+ +     + + D+I+  
Sbjct: 91  DIKEKEPLLRDFHNIMEQDGWTFDKNGPNEKDRELLVHFDDIIFELKKVKKPYYDIIKDI 150

Query: 125 FFDSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSAS----- 166
                N                   K++E Y   ++  +    T +      +       
Sbjct: 151 TEKMGNGMADYALNAEHNNIGVGTIKEYELYCHYVAGLVGEGLTRLFVESNLANPQLLVR 210

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
           + + +  G       +I  +   +   + ++P +I      + +   +  N ++      
Sbjct: 211 MDLTESMGQFLQKVNIIRDVHEDWIDKRRFWPREIWSKYVDNWDDLFAPANREKALQCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 LK+  +    M  I          IP S+  + L     +   I   +    +
Sbjct: 271 EMVLNALKHAEECLFYMAGIRDQSVFNFVAIPQSMAIATLDLVFRNPA-IFERNVKITK 328


>gi|289581968|ref|YP_003480434.1| squalene/phytoene synthase [Natrialba magadii ATCC 43099]
 gi|289531521|gb|ADD05872.1| Squalene/phytoene synthase [Natrialba magadii ATCC 43099]
          Length = 350

 Score = 79.0 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/314 (9%), Positives = 84/314 (26%), Gaps = 41/314 (13%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D  +    +  +     +            +   Y        + D    P      L
Sbjct: 11  DADLEWCYDAVHGVSRTFSITIDRLEEPMSKHICLGYLLCRIADTIEDAGHIPPAEQTEL 70

Query: 78  QWWKDIFESSTKGLIAES-----------------ISPFSVELLSIVRQY--------DL 112
               D           E+                       E   ++R +        ++
Sbjct: 71  LTEYDRLLDPESEQSVEAFMTDVEPWIPEPAERSNDWDVVAETPRVLRTFESLDEEPREI 130

Query: 113 PNQYFLDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMIL----DSER 162
             +   ++++     +          +   ++ E Y +  +  +  L T ++      ER
Sbjct: 131 MREPVRELVDGMAMFTDRYADEGGLRLQTLEELEEYCWYAAGTVGTLITGLVARGASKER 190

Query: 163 YSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
            +      +   +   +  +   +   YH    +Y P + L    +D ++    +N + +
Sbjct: 191 AAEMRDNARSFALLLQLVNIAKDVESDYHEENNVYLPAEWLAEENVDLDAVTDEENHNGV 250

Query: 222 SLAIKIFAELGLKYLFKAREEMRYIL---PDVFPAF-IPVSITESVLKHAQNHGFKIVSH 277
           +  ++        YL  A+  +  +     +   A+ IP  +    ++  +     +V  
Sbjct: 251 TNVVERVTGRAETYLDDAQRYLEVVPEQHGNRLSAWAIPYLLAVGTMRELRERPEDVVEE 310

Query: 278 -SHTPNQLVRPWYM 290
                 +      +
Sbjct: 311 GDVKVPRAEVYALL 324


>gi|72137101|ref|XP_790906.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115965433|ref|XP_001191375.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 411

 Score = 79.0 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/301 (9%), Positives = 81/301 (26%), Gaps = 18/301 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +++    S  +      L                  R ++   Y     L  V D    
Sbjct: 29  PKQKLDEMSPTARKCYVYLNQTSRSFAAVIQALDGDLRHAVCIFYLVLRALDTVEDDMTI 88

Query: 70  PITRDMR-LQWWKDIFESSTK--GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           P+   ++ LQ +    ES         +       +  +I  +Y   ++++ ++I     
Sbjct: 89  PLKDKVQMLQNFYKNLESPDWKYMDSKDKDRIVLEDFPTISTEYRSLDEHYREVISDICH 148

Query: 127 DSY-------NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
                        +   + +  Y   ++  +    + +  + +    +           G
Sbjct: 149 RMGDGMSEVLQTEVITLQDWNMYCHYVAGLVGIGLSKLFSASKLEDPIVGKDTQLSNSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I          + ++P D+    G     F   +N       +       L+
Sbjct: 209 LFLQKTNIIRDYLEDNIDKREFWPRDVWSKYGKKLSDFQEKENITPALHCLNELITNALE 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           ++    + M  +          IP  +  + L     +   + S      +      M+ 
Sbjct: 269 HVPDVIKYMSRLRNQTVFNFCAIPQVMAIATLAK-CYNNRNVFSGVVKIRKGQAVGLMME 327

Query: 293 S 293
           +
Sbjct: 328 A 328


>gi|313126841|ref|YP_004037111.1| farnesyl-diphosphate farnesyltransferase [Halogeometricum
           borinquense DSM 11551]
 gi|312293206|gb|ADQ67666.1| farnesyl-diphosphate farnesyltransferase [Halogeometricum
           borinquense DSM 11551]
          Length = 356

 Score = 79.0 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 91/307 (29%), Gaps = 44/307 (14%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRL 77
            D  +    ++ +     L   +        +   Y        V D +R +P  +   L
Sbjct: 13  TDLEWCHEAVQGVSRTFALTVDVLDEPMSSYICVGYLVCRIADTVEDASRISPPEQADLL 72

Query: 78  QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS----- 132
           + +  + +      + E ++     L   +       +    +I        +       
Sbjct: 73  RTYDAVLDPDNDTTVEEFVTAVEPHLPEEMNDDWRVVRDAPRVIRTFEHLPEDVRNAVTP 132

Query: 133 -----------------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV 169
                                  I   ++ E Y +  +  + +L T ++     SA  R 
Sbjct: 133 PARELVQGMALFVERYDDTGGLRIQSREELEEYCYYAAGTVGNLITNLVTRGDISADRRR 192

Query: 170 I-----KYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
                 +  G+   +  +   +   Y     +Y P + L A G+ ++  ++ ++ +  S 
Sbjct: 193 QLYDTAEQFGLLLQLVNISKDVYDDYTAENNVYLPAEWLAAEGVPQDEVVAPEHEEAASS 252

Query: 224 AIKIFAELGLKYLFKAREEMRYILP------DVFPAFIPVSITESVLKHAQNHGFKIVSH 277
            ++  AE    +L  A+  +  +          +    P  ++   L+         +S 
Sbjct: 253 VVRRTAEHAASFLDDAQTYLETVPATDGNTLAAWAV--PFLLSVGTLRELLARPEDALSK 310

Query: 278 S-HTPNQ 283
           +    ++
Sbjct: 311 TGVKVSR 317


>gi|291231713|ref|XP_002735807.1| PREDICTED: squalene synthetase-like, partial [Saccoglossus
           kowalevskii]
          Length = 293

 Score = 79.0 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/253 (9%), Positives = 69/253 (27%), Gaps = 15/253 (5%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + +  + +  +      L                  R ++   Y     L  V D    
Sbjct: 29  PKLDYNLMTPSAKQCYNYLSQTSRSFAAVIQALEGDLRHAVCIFYLVLRALDTVEDDMTI 88

Query: 70  PITRD--MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQ--------YDLPNQYFLD 119
           P+ R   M   ++K + E   + + ++      +E    +          Y    +    
Sbjct: 89  PLDRKIPMLKAFYKYLNEPEWRFMESQEKDKIVLEDFPTISAEFRSLDPIYQDVIRDICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYA-----G 174
            + A         +     ++ Y   ++  +    + +  + +    +           G
Sbjct: 149 EMGAGMTLYLQKEVLTNADWDEYCHYVAGLVGIGLSRLFSASKLEDKVVGEDTYLSNSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P +       + E     ++ ++    +       LK
Sbjct: 209 LFLQKTNIIRDYLEDILEGRKFWPKETWSKYTENLEDLKKSEHFEKSVNCLNDLVTNALK 268

Query: 235 YLFKAREEMRYIL 247
           ++    + M  I 
Sbjct: 269 HVPDVLQYMSRIH 281


>gi|167647066|ref|YP_001684729.1| hypothetical protein Caul_3104 [Caulobacter sp. K31]
 gi|167349496|gb|ABZ72231.1| conserved hypothetical protein [Caulobacter sp. K31]
          Length = 246

 Score = 79.0 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 60/180 (33%), Gaps = 13/180 (7%)

Query: 26  RNLRDIDYDRYLACLL-SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
             +R +D DR+LA    + P  R  +  LY F+ EL RV     N +  ++RL WW++  
Sbjct: 18  ALVRRVDPDRWLASRFIADPRGRADVIALYAFNYELARVAGGVSNALMGEIRLTWWREAM 77

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E    G       P        V     P     +M +A   D          Q   Y  
Sbjct: 78  EEIAAGQP-PRKHPTVEA----VAAAGYPLAALAEMAQARIADLDTAPFETEAQVLAYVD 132

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +  ++ LA         +A    +K A  A  +  L          G    P D   A
Sbjct: 133 ATAGAVMMLAA---WRLDPAADPHAVKNAARAYGLAGLWR----LKRAGVQRLPADWTQA 185


>gi|302507968|ref|XP_003015945.1| hypothetical protein ARB_06257 [Arthroderma benhamiae CBS 112371]
 gi|291179513|gb|EFE35300.1| hypothetical protein ARB_06257 [Arthroderma benhamiae CBS 112371]
          Length = 436

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/252 (9%), Positives = 69/252 (27%), Gaps = 23/252 (9%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMR 76
           +         L+          +   P   + +   Y     L  V D    P  T++  
Sbjct: 3   TETEKKCYEFLKLTSRSFSAVIMELHPELLMPVCLFYLILRGLDTVEDDTSIPLETKEPI 62

Query: 77  LQWWKDIFESSTKGLIAES----ISPFSVELLSIVRQYDLPNQYFLDMI----------- 121
           L+ +KDI E                   V+  +++ ++      +  +I           
Sbjct: 63  LRGFKDILEEDGWTFTGNRPEEKDRELLVQFHNVITEFKKIKPAYKVIIKDITEKMGNGM 122

Query: 122 -EAHFFDSYNDSI-FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +       +D I    + ++ Y + ++  +    T +     ++    + +       G
Sbjct: 123 ADYIRRGQEDDEIVKTIEDYDLYCYYVAGLVGEGLTRLFVEAGFARPELLERPELFISMG 182

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
                  +I  +   +   + ++P +I      +       +   +            L 
Sbjct: 183 RFLQKTNIIRDVREDHDDKRRFWPREIWSRHVKEFSDLFKPEFRPQALNCNADMILNALS 242

Query: 235 YLFKAREEMRYI 246
           ++      +  +
Sbjct: 243 HVEDCIYYLSAL 254


>gi|68483149|ref|XP_714509.1| hypothetical protein CaO19.11099 [Candida albicans SC5314]
 gi|68483250|ref|XP_714460.1| hypothetical protein CaO19.3616 [Candida albicans SC5314]
 gi|46436026|gb|EAK95396.1| hypothetical protein CaO19.3616 [Candida albicans SC5314]
 gi|46436082|gb|EAK95451.1| hypothetical protein CaO19.11099 [Candida albicans SC5314]
          Length = 448

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/295 (10%), Positives = 77/295 (26%), Gaps = 30/295 (10%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMR 76
            ++ +     L               P  R ++   Y     L  + D        +   
Sbjct: 36  DKELVRCYELLNLTSRSFAAVIEELHPELRDAVMIFYLVLRALDTIEDDMTIKSSIKIPL 95

Query: 77  LQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS---- 128
           L+ +     +           E      VE   I+  Y      + D+I++  F      
Sbjct: 96  LREFDTKLNTKNWTFDGNGPNEKDRTVLVEFDKILNVYHRLKPQYQDIIKSITFKMGNGM 155

Query: 129 ---------YNDSIFDCKQFEHYAFRISSRLI------HLATMILDSERYSASLRVIKYA 173
                      + +   + +  Y   ++  +        +     D      +       
Sbjct: 156 ADYILDEEFNVNGVATVEDYNLYCHYVAGLVGEGLTNLFVLANFGDKTLTENNFAKADSM 215

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRIS--LAIKIFAE 230
           G+      +I         G+ ++P +I      + + F      +   +    I     
Sbjct: 216 GLFLQKTNIIRDYHEDLQDGRSFWPREIWSKYTENLQDFHKVKTPAKEFAGVSCINELVL 275

Query: 231 LGLKYLFKAREEMRYI-LPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             L ++    + +  +  P  F    IP  +  + L    N+  K++       +
Sbjct: 276 NALGHVTDCLDYLSLVKDPSSFSFCAIPQVMAVATLAEVYNNP-KVLHGVVKIRK 329


>gi|126303285|ref|XP_001372440.1| PREDICTED: similar to squalene synthetase [Monodelphis domestica]
          Length = 417

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/293 (8%), Positives = 77/293 (26%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  V D    
Sbjct: 29  PKLDQDTLSDGLKTCFKYLNQTSRSFAAVIQALDSGLRNAVCIFYLVLRALDTVEDDMTI 88

Query: 70  PITRDMRLQW----------WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + +            W  +  +     + E  S  S+E  ++   Y +       
Sbjct: 89  SMEKKVTMLKNFHSYLYQPDWSYMESNEKDRQVLEDFSTVSLEFRNLEESYQVVIHEICQ 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +    ++   ++++ Y   ++  +      +  +      +           G
Sbjct: 149 KMGNGMAEFLEKNVNSIQEWDMYCHYVAGLVGIGLCRLFLASDLEDPIIGKDLELANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L+
Sbjct: 209 LFLQKTNIIRDYLEDTMEGREFWPQEVWSRYAKKLSDFTKPENIDLAVHCLNELITNALQ 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDILTFLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGKVKIRKGQ 320


>gi|115402367|ref|XP_001217260.1| squalene synthetase [Aspergillus terreus NIH2624]
 gi|114189106|gb|EAU30806.1| squalene synthetase [Aspergillus terreus NIH2624]
          Length = 476

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/299 (10%), Positives = 82/299 (27%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             + EK  +       + L               P   + +   Y     L  + D    
Sbjct: 36  HERNEKDETETQKICFKFLDQTSRSFSAVIKELHPELLLPVCVFYLTLRGLDTIEDDTSI 95

Query: 70  P-ITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P  T++  L+ +KDI E            E      V+  +++ +Y      +  +++  
Sbjct: 96  PLETKEPLLRGFKDIMEQDGWTFNGNRPEEKDRELLVQFHNVITEYKNMKPAYRAIVKDI 155

Query: 125 FFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                             + S+    +++ Y + ++  +    T +     +     + +
Sbjct: 156 TDKMGNGMADYCHKAATEDASVKTTVEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLKR 215

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +       + ++P +I      D       ++ +       
Sbjct: 216 PQLHKSMGLFLQKTNIIRDVREDNDDNRRFWPREIWSKHVSDFNDLFKPEHREAALNCSS 275

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L+++      +  +          IP S+  + L         I   +    +
Sbjct: 276 EMVLNALEHVEDCLFYLAGLREQSIFNFCAIPQSMAIATL-ELCFRNPAIFQRNIKITK 333


>gi|2499979|sp|P78589|FDFT_CANAL RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|1711286|dbj|BAA13995.1| squalene synthase [Candida albicans]
          Length = 448

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/289 (11%), Positives = 74/289 (25%), Gaps = 30/289 (10%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI-TRDMRLQWWKD 82
               L               P  R ++   Y     L  + D        +   L+ +  
Sbjct: 42  CYELLNLTSRSFAAVIEELHPELRDAVMIFYLVLRALDTIEDDMTIKSSIKIPLLREFDT 101

Query: 83  IFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS------ 132
              +           E      VE   I+  Y      + D+I++  F   N        
Sbjct: 102 KLNTKNWTFDGYGPNEKDRTVLVEFDKILNVYHRLKPQYQDIIKSITFKMGNGMADYILD 161

Query: 133 -------IFDCKQFEHYAFRISSRLI------HLATMILDSERYSASLRVIKYAGIAQFI 179
                  +   + +  Y   ++  +        +     D      +       G+    
Sbjct: 162 EEFNVYGVATVEDYNLYCHYVAGLVGEGLTNLFVLANFGDKTLTENNFAKADSMGLFLQK 221

Query: 180 GQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLS-GQNSDRIS--LAIKIFAELGLKYL 236
             +I         G+ ++P +I      + + F      +   +    I       L ++
Sbjct: 222 TNIIRDYHEDLQDGRSFWPREIWSKYTENLQDFHKVKTPAKEFAGVSCINELVLNALGHV 281

Query: 237 FKAREEMRYI-LPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               + +  +  P  F    IP  +  + L    N+  K++       +
Sbjct: 282 TDCLDYLSLVKDPSSFSFCAIPQVMAVATLAEVYNNP-KVLHGVVKIRK 329


>gi|119612139|gb|EAW91733.1| chromosome 8 open reading frame 38, isoform CRA_a [Homo sapiens]
          Length = 101

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 35/95 (36%)

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL 264
            G+ +E FL       +   I   A     +L  AR   + +    FPAF+     E  L
Sbjct: 7   HGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQTVSLEDFL 66

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           K  Q   F I   S      + P Y+   S +K +
Sbjct: 67  KKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY 101


>gi|154685530|ref|YP_001420691.1| YisP [Bacillus amyloliquefaciens FZB42]
 gi|154351381|gb|ABS73460.1| YisP [Bacillus amyloliquefaciens FZB42]
          Length = 246

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 60/251 (23%), Gaps = 13/251 (5%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
                +                PP  R +   +     E  R+ D             + 
Sbjct: 4   YETCAQLAEAHFPLYKRTFSSLPPKNRRAAWAVLALFHEADRL-DVQELGGFEQAAQDFL 62

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
                                 L  + +Q+ L  +   + I     D    +  +     
Sbjct: 63  NGSRADGF----------LWEALTDVRQQFALEEEPLREFIAGQISDREKVTYQEFDDLL 112

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLD 200
            YA +    L  L   +                G A  + +++ ++     R +   P  
Sbjct: 113 MYAGQTGGALGLLLLPVCARRNQGKLRHAAVSLGAAIQLTRVLLEVHTD-ERAKKRLPRQ 171

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI-PVSI 259
           ++   G   E   S   +       +  A     Y  +A EE+        PA     + 
Sbjct: 172 VMKQFGYTEEELESHTVNKAFMNVWEYIAFEAEAYFEEASEELELFPLYSRPAVTGLAAH 231

Query: 260 TESVLKHAQNH 270
             S L   +  
Sbjct: 232 YRSELGDMRQQ 242


>gi|225620218|ref|YP_002721475.1| squalene/phytoene synthase-like protein [Brachyspira hyodysenteriae
           WA1]
 gi|225215037|gb|ACN83771.1| SQS PSY, Squalene/phytoene synthase-like protein [Brachyspira
           hyodysenteriae WA1]
          Length = 333

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/279 (11%), Positives = 80/279 (28%), Gaps = 31/279 (11%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW- 80
            ++L  +        L   L     +  +   Y     +  + D++ N   +D  +  + 
Sbjct: 8   KYLLDLV---SRSFALTIPLLDKNKKNKVEVQYLLARIIDTIEDSSHNAEDKDTLITAFI 64

Query: 81  -------KDIFESSTKGLIAESISPFSVELLSIVR-------QYDLPNQY----FLDMIE 122
                   D  E+    +I  SI+     L+  +         +    +     +L  + 
Sbjct: 65  NILKTENLDNLENFKNVVIQHSINENDKVLIENIDVVVKSFFTFKPEIKNISISYLREMG 124

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLI-HLATMILDSERYSASLRVIKYAGIAQFIGQ 181
                  + +I   +  + Y + ++  +  +L  +    +         K  G       
Sbjct: 125 YGMIYYQDHTISTFEDLDDYCYYVAGTVGLYLTELAKILDNIELDREKAKSLGRFLQKVN 184

Query: 182 LICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           +I    + Y   ++++P+ +          F  G   D+    +    E  +     + E
Sbjct: 185 IIKDAKLDYGEKRVFWPISLFENEN-PAPYFEDGAYMDKSMEILIKMVESAMSEFRNSIE 243

Query: 242 EMRYILPDV-----FPAFIPVSITESVLKHAQNHGFKIV 275
            +  I         F     +   E++        + I 
Sbjct: 244 YIMDIDKKASGYRHFCLVAVLMGYETI--KLMKSNYNIF 280


>gi|320445235|gb|ADW27427.1| squalene synthase [Astragalus membranaceus]
          Length = 413

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/278 (9%), Positives = 63/278 (22%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWK 81
           F    L  +     L         R ++   Y     L  V D        +   L  + 
Sbjct: 39  FCYTMLHKVSRSFGLVFQQLDTELRNAVCIFYLVLRGLDTVEDDTSIATEVKVPILIAFH 98

Query: 82  DIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                     +          E     S   L + + Y    +     + A         
Sbjct: 99  RHIYDHDWHFLCGTKEYKVLMEQFHHVSAAFLELGKNYQEAIEDITKRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV--IKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +               G+      +I       
Sbjct: 159 VETLDDYDEYCHYVAGLVGLGLSKLFHASGSEDLFPDSLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 H---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +   + ++++P  I        E     +NS      +       L +     + M  + 
Sbjct: 219 NEIPKSRMFWPRQIWSKYVNKLEELKYEENSVEAVQCLNDMITNALIHAEDCLKYMSALR 278

Query: 247 -LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                    IP  +    L     +   +        +
Sbjct: 279 DPAIFRFCAIPQIMAIGTL-ALCYNNIVVFRGVVKMRR 315


>gi|322702671|gb|EFY94302.1| squalene synthase [Metarhizium anisopliae ARSEF 23]
          Length = 488

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 81/297 (27%), Gaps = 24/297 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R++    S       R L                   + +S  Y     L  + D    
Sbjct: 27  HRRDPSTESETLKECFRFLNLTSRSFAAVIQELNHELLVPISLFYLVLRGLDTIEDDMTI 86

Query: 70  PITRD----------MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQY-----DLPN 114
           P+++           M +  W+          + E       EL  I   Y     D+  
Sbjct: 87  PLSKKVPLLRNFHDTMEVDGWQYHESQEKDRELLEKFDVVITELKKIKPTYYAIIKDITI 146

Query: 115 QYFLDMIEAHFFD-SYNDSIFDCKQFEHYAFRISSRLIHLATMILD-----SERYSASLR 168
           +    M +    D    + +     +E Y   ++  +    T +       + + +    
Sbjct: 147 KMGHGMADYAQNDEMIKNGVNTIDDYELYCHYVAGLVGEGLTRLFVASELGNPKLAERPS 206

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
           + +  G       +I  L   +  G+ ++P +I        E        D+    I   
Sbjct: 207 LTESMGQFLQKTNIIRDLREDWSDGRRWYPKEIWSRHVDKWEDLFDPNYEDKALNCISDM 266

Query: 229 AELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               LK+  +    M  +          IP  +  + L+    +   ++  +    +
Sbjct: 267 VLDALKHCEECLFYMAGMREQSVFNFVAIPQGMAIATLELVFRNP-DVLKRNVKITK 322


>gi|302125044|gb|ADK93978.1| squalene synthase [Naegleria gruberi]
          Length = 446

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 69/305 (22%), Gaps = 40/305 (13%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA----RNPITR 73
               +F    L  +     +     P   +  ++  Y     L  V D       NP  +
Sbjct: 31  DESLVFCYDKLNQVSRSFAMVIQELPEELKHPIAIFYLVLRGLDTVEDDIEYLKENPEAK 90

Query: 74  DMRLQWWKDIFE----------------SSTKGLIAESISPFSVELLSIVRQYDLPNQYF 117
              L+ +                     +    L+        + L    +   +     
Sbjct: 91  HELLRTFYQKIRDPNFHLENCGGSLQATAHYADLMLHFDHVCKIFLRLDQKYQAVIEDVT 150

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI----------------HLATMILDSE 161
           + M            +   K ++ Y   ++  +                      +  S 
Sbjct: 151 MKMGCGMVDYLGMTGVDTVKDYDEYCHYVAGLVGIGLSDMFSAFGENREDLFKAGLSGSS 210

Query: 162 RYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL-DRESFLSGQNSDR 220
                  +    G+      +I         G+ ++P       GL         +N  +
Sbjct: 211 EEPTKKSLSNLMGLFLQKVNIIRDYAEDIEEGRTFYPSSAFQQFGLTQVTDLKDPKNLPQ 270

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHS 278
               +       L +     E M  I          IP  +  + L    N+   +   +
Sbjct: 271 ALKTLNYLVTDALSHAPDCLEYMSNIKDPKVFSFCAIPQVMAIATLVEIYNNP-NVFVKN 329

Query: 279 HTPNQ 283
               +
Sbjct: 330 VKIRK 334


>gi|319431006|gb|ADV57358.1| squalene synthase [Astragalus membranaceus]
          Length = 405

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/278 (9%), Positives = 63/278 (22%), Gaps = 18/278 (6%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWK 81
           F    L  +     L         R ++   Y     L  V D        +   L  + 
Sbjct: 39  FCYTMLHKVSRSFGLVFQQLDTELRNAVCIFYLVLRGLDTVEDDTSIATEVKVPILIAFH 98

Query: 82  DIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                     +          E     S   L + + Y    +     + A         
Sbjct: 99  RHIYDHDWHFLCGTKEYKVLMEQFHHVSAAFLELGKNYQEAIEDITKRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV--IKYAGIAQFIGQLICQLPIHY 190
           +     ++ Y   ++  +    + +  +               G+      +I       
Sbjct: 159 VETLDDYDEYCHYVAGLVGLGLSKLFHASGSEDLFPDSLSNSMGLFLQKTNIIRDYLEDI 218

Query: 191 H---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI- 246
           +   + ++++P  I        E     +NS      +       L +     + M  + 
Sbjct: 219 NEIPKSRMFWPRQIWSKYVNKLEELKYEENSVEAVQCLNDMITNALIHAEDCLKYMSALR 278

Query: 247 -LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                    IP  +    L     +   +        +
Sbjct: 279 DPAIFRFCAIPQIMAIGTL-ALCYNNIVVFRGVVKMRR 315


>gi|27764301|emb|CAD60581.1| unnamed protein product [Podospora anserina]
          Length = 532

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 81/299 (27%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            R++    +         L+              P   + +   Y     L  + D    
Sbjct: 31  HRRDASKETPTEKSCFHFLKLTSRSFSAVIQELNPELLMPICLFYLVLRGLDTIEDDMTL 90

Query: 69  NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +   ++  L+ + +I E            E      V    I+ +     + + D+I+  
Sbjct: 91  DIKEKEPLLRDFHNIMEQDGWTFDKNGPNEKDRELLVHFDDIIFELKKVKKPYYDIIKDI 150

Query: 125 FFDSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSAS----- 166
                N                   K++E Y   ++  +    T +      +       
Sbjct: 151 TEKMGNGMADYALNAEHNNIGVGTIKEYELYCHYVAGLVGEGLTRLFVESNLANPQLLVR 210

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
           + + +  G       +I  +   +   + ++P +I      + +   +  N ++      
Sbjct: 211 MDLTESMGQFLQKVNIIRDVHEDWIDKRRFWPREIWSKYVDNWDDLFAPANREKALQCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 LK+  +    M  I          IP S+  + L     +   I   +    +
Sbjct: 271 EMVLNALKHAEECLFYMAGIRDQSVFNFVAIPQSMAIATLDLVFRNPA-IFERNVKITK 328


>gi|328353390|emb|CCA39788.1| Squalene synthetase [Pichia pastoris CBS 7435]
          Length = 487

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 108/345 (31%), Gaps = 71/345 (20%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR---------- 73
               L   D   YL     P   R +   +  F  E+ ++ D+     ++          
Sbjct: 141 CTEMLNKFDKSSYLLAHYIPEPARDTWMAIRCFLLEVNKISDSNTRANSQFRANVGVGLL 200

Query: 74  DMRLQWWKDIFESSTKGLIAES-ISPFSVELLSIV-RQYDLPNQYFLDMIEAHFFDSYND 131
           D++ ++W+++ +    G   +    P +  L   + ++ +L    F  ++ +      N 
Sbjct: 201 DVKFKFWEELLQKVFLGGYQKPLGEPVATLLRDGINKELNLDIGMFQQILTSRLHYLKNT 260

Query: 132 S---IFDCKQFEHYAFRISSRLIHLATMILDSERYSASL---------------RVIKYA 173
           S     +  +   Y   I S+  +L   +L S   S S                 V  + 
Sbjct: 261 SKLGFKNMDEVCSYGEGIYSQSNYLTQRLLLSPNISPSAVELLEQAPFLETNLTEVAAHL 320

Query: 174 GIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLS-----------GQNSDRI 221
           G A  +  ++  L  +   +  +  PLD++    L +E  L             + SD++
Sbjct: 321 GQATGVATMLIGLKYYATTQNHIPLPLDLMAKHDLSQEQLLRLFHGYLEGSDLARASDQL 380

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILPD----------------VFP------------- 252
           S  +   A     ++  AR++   +  D                                
Sbjct: 381 SNVVFDVATTANDHILTARQKFDQLKQDICQVLDVDQAHNEFLQSRAQNWTKKVPDVLYV 440

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
            F+    T+  L   + + F I + +         W   S+  ++
Sbjct: 441 PFMSSIPTQLYLSKLEKYNFDINNGNLQSKDWKLAWKSYSNYSRR 485


>gi|320170185|gb|EFW47084.1| farnesyl-diphosphate farnesyltransferase 1 [Capsaspora owczarzaki
           ATCC 30864]
          Length = 418

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/289 (8%), Positives = 70/289 (24%), Gaps = 22/289 (7%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            + +            R L                  R ++   Y     L  + D    
Sbjct: 28  PKNDLSALPESMQKCYRLLEATSRSFAAVIQALDGELRPAICIFYLVLRGLDTIEDDMTL 87

Query: 69  NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
               +   L  + +I   +          E+     V+   ++ ++      + ++I   
Sbjct: 88  ANEVKVPLLVDFHEIIYKTGWTFNGNGPDEADRHLLVDFDVVIAEFLKLRPAYQEVIADI 147

Query: 125 FFDSY-------NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKY 172
                          +     +  Y   ++  +    + I  +    +        +   
Sbjct: 148 TKRMGLGMSKFLGAQVHTKDDYNEYCHYVAGLVGIGLSKIFAASGLESEAVGTSEHLSNS 207

Query: 173 AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV--GLDRESFLSGQNSDRISLAIKIFAE 230
            G+      +I         G++++P  +          + F + +N       +     
Sbjct: 208 MGLFLQKTNIIRDYLEDIIDGRIFWPRAVWIKYAPNGKLDDFRAPENKAAALACLNDLVT 267

Query: 231 LGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSH 277
             L ++      M  +          IP  +  + L        ++ + 
Sbjct: 268 DALAHIPDVFAYMSSLRNQSVFNFCAIPQVMAIATL-ALVYDNHQVFTR 315


>gi|261417498|ref|YP_003251181.1| Squalene/phytoene synthase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373954|gb|ACX76699.1| Squalene/phytoene synthase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325382|gb|ADL24583.1| squalene/phytoene synthase family protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 360

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 74/273 (27%), Gaps = 43/273 (15%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR- 76
                +    L+ +     L   +       S+   Y +      V D      T   R 
Sbjct: 18  KAAWKYAEDILQLVSRTFALNIQVLRGKLHRSILLAYLYLRIADTVEDDPDMKATEKDRV 77

Query: 77  LQWWKDIFE---------SSTKGLIAESIS-----------------PFSVELLSIVRQY 110
           L  + D+F+          +    + ES                   P    L    ++ 
Sbjct: 78  LALFADVFKTGELETEKIRTFVAALPESWHGSEDPNKDLCSKSEVVVPLLKSLPKNYQKP 137

Query: 111 DLPNQYFLD-------MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY 163
                  +        + +     +   ++ +  + + Y + ++  +  L T +  ++  
Sbjct: 138 VCDVVIEMCGGMAKFALRQEAALSAGWFTLANVGELDEYCYYVAGIVGKLLTKLFSADTC 197

Query: 164 SASLRVIKYA-------GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR--ESFLS 214
             +              G+A  +  ++        R   + P +I    G     E F +
Sbjct: 198 FINAEREAELSKLDVSFGLALQVVNIVKDCVEDSGRRVCFIPEEICKRHGFAHPSELFAA 257

Query: 215 GQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
           G ++ +    +    E    +L  A    + I 
Sbjct: 258 GADAQKCGAVLSELVEKAWHHLDDAIAYTKLIP 290


>gi|257052017|ref|YP_003129850.1| Squalene/phytoene synthase [Halorhabdus utahensis DSM 12940]
 gi|256690780|gb|ACV11117.1| Squalene/phytoene synthase [Halorhabdus utahensis DSM 12940]
          Length = 348

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 82/298 (27%), Gaps = 40/298 (13%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQ 78
           D  +    ++ +     L            +   Y        + D     P  +   L 
Sbjct: 9   DIEWCYEAVQGVSRTFALTVEALDEPMASQIGLGYLLCRVADTIEDAGHIPPDEQVSLLA 68

Query: 79  WWKDIFESSTKGLIAESISPFSVEL--------LSIVRQYDLPNQYF------------- 117
            +    +    G + +  S     L          +V +       F             
Sbjct: 69  TYDAALDPDADGTMLDFRSAVDPWLPEPERSEDWRVVARAPTVWATFADQPADARAAIVP 128

Query: 118 --LDMIEAHFFDSYND------SIFDCKQFEHYAFRISSRLIHLATMILDSE-----RYS 164
              +M++                + D  + + Y    +  +  L T +L  +     R  
Sbjct: 129 PVREMVDGMADFLSAHAATGGLRLADYAELDEYCHYAAGTVGMLITNLLTRDGVAQGRSE 188

Query: 165 ASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
                         +  +   +   +H    +Y P   L A  +++E  L+ +N D +  
Sbjct: 189 TLYETAGSFARLLQLVNVAKDVHADFHEENNVYLPATWLAAENVEQEHVLADRNRDAVGR 248

Query: 224 AIKIFAELGLKYLFKAREEMRYIL---PDVFPAF-IPVSITESVLKHAQNHGFKIVSH 277
            +   A     +L  A+  +  +     +   A+ +P  ++   L+  +N     ++ 
Sbjct: 249 VVDRTATRARTFLDDAQSYLEAMPLSHGNTLAAWSVPYLLSVGTLRELRNRPGDALTE 306


>gi|224079633|ref|XP_002305901.1| predicted protein [Populus trichocarpa]
 gi|222848865|gb|EEE86412.1| predicted protein [Populus trichocarpa]
          Length = 97

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 33/96 (34%), Gaps = 1/96 (1%)

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAF 254
           Y P D L   GL  +   + + +++    +K   +    +  +A + +  +      P  
Sbjct: 1   YLPQDELTQAGLSDDDIFAAKVTEKWRNFMKNQIKRARMFFDEAEKGVTELSAASRWPIS 60

Query: 255 IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYM 290
             + +   +L   + +     +     ++  +   +
Sbjct: 61  ASLLMYRQILDEIEANDCNNFTKRAYASKTKKIVSL 96


>gi|223939747|ref|ZP_03631619.1| Squalene/phytoene synthase [bacterium Ellin514]
 gi|223891618|gb|EEF58107.1| Squalene/phytoene synthase [bacterium Ellin514]
          Length = 292

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/174 (10%), Positives = 51/174 (29%), Gaps = 11/174 (6%)

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-------YAGIAQFIGQLICQLPIH 189
            + + Y +R++  +    T +  +  +  +    +         G    +  ++  LP  
Sbjct: 107 AELDDYTYRVAGCVGEFWTKMCRAHLFPKAAIDEELLLKNGVRFGKGLQLVNILRDLPAD 166

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
              G+ Y P + L  +GL+    L  +N  +       +  +   +L         +   
Sbjct: 167 LSHGRCYMPSERLAQIGLNPGDLLESKNETKFRQLYNEYLGVAESHLAAGWAYTNMLPKG 226

Query: 250 VFPAFIPVS----ITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                +  +    I    +   +             ++      M+ S +   +
Sbjct: 227 CVRVRLACAWPILIGMQTIAKLKTENVLDPRQRIKISRAEVKQLMMRSVLAYPW 280


>gi|326511393|dbj|BAJ87710.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326532364|dbj|BAK05111.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 404

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/282 (10%), Positives = 73/282 (25%), Gaps = 22/282 (7%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             F    L+ +     L      P  R ++   Y     L  V D    P   +++L   
Sbjct: 33  WAFAYDMLQRVSRSFALVIQQLGPELRNAVCVFYLVLRALDTVEDDTGIPN--EVKLPIL 90

Query: 81  KDIFESSTKGLI------------AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           +D +                     ++    S   L +   Y    +     +       
Sbjct: 91  RDFYRHIYNPDWLFSCGANDYRVLMDNFRQVSTAFLELGEGYQKAIEEITRRMGEGMAKF 150

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQL 186
               +     ++ Y   ++  + +  + +  +      A   +    G+      +I   
Sbjct: 151 ICMEVQTIDDYDEYCHYVAGLVGYGLSRLFHATGTEDLAPDHLSNSMGLFLQKTNIIRDY 210

Query: 187 PIHYHRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
               +      +++P +I        E     +NS++    +       L +     + M
Sbjct: 211 LEDINEIPKCRMFWPREIWSKYVDKLEDLKYEENSEKAVQCLNDMVTNALIHAHDCLQYM 270

Query: 244 RYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             +  +       IP  +          +  K+        +
Sbjct: 271 SALKDNSNFRFCAIPQIMAIGTC-AICYNNVKVFRGVVKMRR 311


>gi|156060769|ref|XP_001596307.1| hypothetical protein SS1G_02527 [Sclerotinia sclerotiorum 1980]
 gi|154699931|gb|EDN99669.1| hypothetical protein SS1G_02527 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 451

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/297 (9%), Positives = 76/297 (25%), Gaps = 26/297 (8%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           ++    S+      + L               P   + ++  Y     L  V D    P+
Sbjct: 33  RDPTKESQSLKDCFKYLELTSRSFSSVIQELNPELLVPVALFYLILRGLDTVEDDMTIPL 92

Query: 72  TRDMRLQWWKDIFESSTKGL-----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
            +   L    D                E      V    ++ ++      +  +I+    
Sbjct: 93  EKKEPLLRTFDSIIEQDGWTFNENGPNEKDRELLVHFDCVITEFKKCKPAYQKIIKDITK 152

Query: 127 DSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-- 171
              +                   K +E Y   ++  +    T +    + +    + +  
Sbjct: 153 KMGDGMADYANNAEHNINGVNTIKDYELYCHYVAGLVGDGLTRLFVESKLANPALLNRPE 212

Query: 172 ---YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G       +I  +   +   + ++P +I      + +     +N +         
Sbjct: 213 LSESMGQFLQKTNIIRDIREDFDDKRRFWPKEIWSKHVENFDDLFDPKNREVALACSSEM 272

Query: 229 AELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               L++  +    M  I          IP ++  + L+    +   I   +    +
Sbjct: 273 VLNSLRHADECLFYMAGIKDQSVFNFVAIPQAMAIATLELVFQNPA-IFEKNVKITK 328


>gi|190348562|gb|EDK41034.2| hypothetical protein PGUG_05132 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 450

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 77/308 (25%), Gaps = 30/308 (9%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPI 71
           E              L               P  R+++   Y     L  V D       
Sbjct: 31  EPTEARSSLKRCDDLLNLTSRSFAAVIKELHPKTRVAVMVFYLVLRALDTVEDDMTLQHD 90

Query: 72  TRDMRLQWWKDIFE----SSTKGLIAESISPFSVELLSIVRQYDL--------PNQYFLD 119
            +   L+ +         S       E      V+   I+ +Y            +    
Sbjct: 91  VKIPLLRQFHTKLNTTDYSFNGSGPNEKDREVLVQFPEILAEYHRLDSEFQDVIKEITDK 150

Query: 120 MIEAHFFDSYNDSI-----FDCKQFEHYAFRISSRLIHLATMILDSERY------SASLR 168
           M         +D+         K ++ Y   ++  +    T I+    +        + +
Sbjct: 151 MGNGMADYILDDNFNTNGVATVKDYDLYCHYVAGLVGEGLTKIMAHANFINESLNQDNYQ 210

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLA---I 225
             +  G+      +I         G+ ++P +I         SF   Q+      A   I
Sbjct: 211 KSESMGLFLQKTNIIRDYQEDMQDGRSFWPQEIWSKYTNSLASFHKDQSEKSQEQALYCI 270

Query: 226 KIFAELGLKYLFKAREEMRYI-LPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  + ++      +  +  P  F    IP  +  + L    N+   +        +
Sbjct: 271 SELVLNAMNHINDVLVYLANVNDPSCFSFCAIPQVMAVATLATVYNNP-DVTHKVVKIRK 329

Query: 284 LVRPWYML 291
                 +L
Sbjct: 330 GTTVKLIL 337


>gi|295822127|gb|ADG36717.1| squalene synthase 2 [Glycyrrhiza uralensis]
 gi|295822129|gb|ADG36718.1| squalene synthase 2 [Glycyrrhiza uralensis]
          Length = 412

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 74/300 (24%), Gaps = 19/300 (6%)

Query: 2   VLKFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           +LK      + E++I       F    L  +            P  R ++   Y     L
Sbjct: 17  LLKLKIAARQAEKQIPREPHWSFCYTMLHKVSRSFAFVIQQLGPDLRNAVCIFYLVLRAL 76

Query: 61  MRVRDTAR-NPITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQY 110
             V D        +   L  +                      +     S   L + + Y
Sbjct: 77  DTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNY 136

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLR 168
               +     + A         +     ++ Y   ++  +    + +  +      AS  
Sbjct: 137 QEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVARLVGLGLSKLFHASGSEDLASDY 196

Query: 169 VIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
           +    G+      +I       +   + ++++P  I        E      NS +    +
Sbjct: 197 LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEDNSVKAVQCL 256

Query: 226 KIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +     + M  +          IP  +    L     +  ++        +
Sbjct: 257 NDMVTNALMHAEDCLKYMAALRDLAIFRFCAIPQIMAIGTL-ALCYNNIELFRGVVKMRR 315


>gi|70982564|ref|XP_746810.1| farnesyl-diphosphate farnesyltransferase [Aspergillus fumigatus
           Af293]
 gi|66844434|gb|EAL84772.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
           fumigatus Af293]
 gi|159122950|gb|EDP48070.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
           fumigatus A1163]
          Length = 471

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/299 (10%), Positives = 87/299 (29%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++E   S  +    + L               P   + +   Y     L  + D    
Sbjct: 31  HERDESNESETAKTCFKFLDLTSRSFSAVIKELHPELLLPMCIFYLTLRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTKGLIAES----ISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P  T++  L+ +KD+ E                   V+  +++ ++      +  +I+  
Sbjct: 91  PLETKEPLLRGFKDVLEQDGWNFTGNRPEEKDRELLVQFHNVITEFKRLKPAYKAVIKDI 150

Query: 125 FFDSYNDS-------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                N               +   ++++ Y + ++  +   +T +     +     + +
Sbjct: 151 TEKMGNGMADYCRKAALDDASVKTVEEYDLYCWYVAGLVGEGSTRLFVEAEFGNPALLKR 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   +  G+ ++P +I      + E     +N +       
Sbjct: 211 TELYKSMGLFLQKTNIIRDVREDFDDGRQFWPKEIWSKHVTNFEDLFKPENREAALNCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L++  +    +  +          IP S+  + L     +   I   +    +
Sbjct: 271 EMVLNALRHAEECLFYLAGLREQSVFNFCAIPQSMAIATLSLCFRNPA-IFERNIKIKK 328


>gi|222625999|gb|EEE60131.1| hypothetical protein OsJ_13016 [Oryza sativa Japonica Group]
          Length = 413

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/290 (10%), Positives = 72/290 (24%), Gaps = 28/290 (9%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-RLQW 79
             F    L+ +     L      P  R ++   Y     L  V D    P    +  L+ 
Sbjct: 33  WAFAYTMLQRVSRSFALVIQQLGPDLRNAVCIFYLVLRALDTVEDDTSIPAAVKVPILKE 92

Query: 80  WKDIFESSTKGLIAESISP---------FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           +     +        +             S   L + + Y    +    ++ A       
Sbjct: 93  FHRHIYNRDWHYSCGTKDYKLLMDKFRLVSTAFLELGQGYQEAIEEITRLMGAGMAKFIC 152

Query: 131 DSI----------FDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQF 178
                             +  Y   ++  + +  + +  +      AS  +    G+   
Sbjct: 153 KEFHVQFLAVLSVETVDDYNEYCHYVAGLVGYGLSRLFHAGGTEDLASDSLSNSMGLFLQ 212

Query: 179 IGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKY 235
              +I       +   + ++++P +I        E     +NS++    +       L +
Sbjct: 213 KINIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKYEENSEKAVQCLNDMVTNALSH 272

Query: 236 LFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                + M  +          IP  +          +   +        +
Sbjct: 273 AEDCLQYMSALKDHAIFRFCAIPQIMAIGTC-AICYNNVNVFRGVVKMRR 321


>gi|86129502|ref|NP_001034383.1| squalene synthase [Gallus gallus]
 gi|53130606|emb|CAG31632.1| hypothetical protein RCJMB04_8p18 [Gallus gallus]
          Length = 418

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/293 (8%), Positives = 70/293 (23%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R +            R L                  R ++   Y     L  + D    
Sbjct: 30  PRMDPDSLGLGLRTCYRYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTIEDDMTI 89

Query: 70  PITRD----------MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            +             +    WK +        + E     S+E  ++ + Y         
Sbjct: 90  SLDVKVPMLNEFHSYLHQPEWKYMESKEKHRQVLEDFPTISMEFRNLAKVYQDVISDICH 149

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +     +    +++ Y   ++  +    + +  +      +           G
Sbjct: 150 KMGVGMAEFLEKKVDSQSEWDRYCHYVAGLVGIGLSRLFSASELEDPIVGQDTELANSMG 209

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++              +N D     +       L+
Sbjct: 210 LFLQKTNIIRDYLEDQLEGREFWPREVWSRYTKKLSDLTKPENIDMAVQCMNELITNALR 269

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 270 HVPDVLTYLSRLKNQSVFNFCAIPQVMAIATL-AACYNNKQVFRGVVKIRKGQ 321


>gi|264681450|ref|NP_001161120.1| squalene synthase [Sus scrofa]
 gi|262072798|dbj|BAI47707.1| farnesyl-diphosphate farnesyltransferase 1 [Sus scrofa]
          Length = 417

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/293 (9%), Positives = 74/293 (25%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +  +   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMNQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRL----------QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            I + + L            W+          + E     ++E  ++  +Y +       
Sbjct: 89  SIEKKIPLLHNFHLHLYESDWRFTESKEKDRQVLEDFPTIALEFRNLAEKYQVVIVDVCR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  N  +   ++++ Y    +  +    + +  +      L           G
Sbjct: 149 KMGFGMAEFLNKHVTSEREWDKYCHYDAGLVGIGLSRLFSASELEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 209 LFLQKTNIIRDYLEDQQEGREFWPQEVWSKYVKKLGDFAKPENVDLAVQCLNELVTSTLH 268

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L  A  +  ++        +  
Sbjct: 269 HIPDVITYLSRLRNQSIFNFCAIPQVMAIATL-AACYNNQQVFKGVVKIRKGQ 320


>gi|39958237|ref|XP_364394.1| hypothetical protein MGG_09239 [Magnaporthe oryzae 70-15]
 gi|145013320|gb|EDJ97961.1| hypothetical protein MGG_09239 [Magnaporthe oryzae 70-15]
          Length = 465

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 85/312 (27%), Gaps = 30/312 (9%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           T+N  KE    +       + L               P   + +   Y     L  + D 
Sbjct: 32  TRNPSKERPTETE----CFKYLDLTSRSFAAVIKELNPELLMPVCIFYLALRGLDTIEDD 87

Query: 67  ARNPITRDM-RLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMI 121
              P  + +  L+ + D  +            E      V    ++ +  L  + + ++I
Sbjct: 88  MTIPNDKKIPLLRNFADFMDQDGWTFNENGPNERDRELLVHFDQVITELKLVKKPYYEII 147

Query: 122 EAHFFDSYN-------------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
                   N             + I   +++E Y   ++  +    T +      +    
Sbjct: 148 RDITVKMGNGMADYVLKTENTTNCINTVEEYEMYCHYVAGLVGEGLTRLFVVAELANPKL 207

Query: 169 VIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
           + +       G       +I  +   Y   + ++P  +      + +     +N  +   
Sbjct: 208 LERMDLAESMGQFLQKTNIIRDVHEDYIDKRSWWPRSVWSKYAKEYDDLFKPENRQQAVY 267

Query: 224 AIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
                    LK +      M  +          IP ++  + L+    +  KI   +   
Sbjct: 268 CCSELVLNALKNVEDCLYYMAGMREQSVFNFVAIPQTMAIATLELVFQNP-KIFERNVKI 326

Query: 282 NQLVRPWYMLSS 293
            +      ML S
Sbjct: 327 TKGDACRIMLRS 338


>gi|119488620|ref|XP_001262760.1| farnesyl-diphosphate farnesyltransferase, putative [Neosartorya
           fischeri NRRL 181]
 gi|119410918|gb|EAW20863.1| farnesyl-diphosphate farnesyltransferase, putative [Neosartorya
           fischeri NRRL 181]
          Length = 471

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 86/299 (28%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++E   S  +    + L               P   + +   Y     L  + D    
Sbjct: 31  HERDESNESDTAKTCFKFLDLTSRSFSAVIKELHPELLLPMCIFYLTLRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTKGLIAES----ISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           P  T++  L+ +KDI E                   V+  +++ ++      +  +I+  
Sbjct: 91  PLETKEPLLRGFKDILEQDGWNFTGNRPEEKDRELLVQFHNVIAEFKKLKPAYKAVIKDI 150

Query: 125 FFDSYNDS-------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                N               +   ++++ Y + ++  +   +T +     +     + +
Sbjct: 151 TEKMGNGMADYCRKAALDDASVKTVEEYDLYCWYVAGLVGEGSTRLFVEAEFGNPALLKR 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   +  G+ ++P +I      D E     +N +       
Sbjct: 211 TELYKSMGLFLQKTNIIRDVREDFDDGRQFWPKEIWSKHVTDFEDLFKPENREAALNCGS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L +  +    +  +          IP S+  + L     +   I   +    +
Sbjct: 271 EMVLNALGHAEECLFYLAGLREQSVFNFCAIPQSMAIATLSLCFRNPA-IFERNIKIKK 328


>gi|312115727|ref|YP_004013323.1| squalene synthase HpnC [Rhodomicrobium vannielii ATCC 17100]
 gi|311220856|gb|ADP72224.1| squalene synthase HpnC [Rhodomicrobium vannielii ATCC 17100]
          Length = 293

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 80/258 (31%), Gaps = 15/258 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             D +  +A  L    +R  +   Y F        D A +P   +    +  D FE++  
Sbjct: 14  HRDENFPVASFLVSKRHRAPIMAFYRFARAA---DDVADDPNLSEDEKVFTLDAFEATLL 70

Query: 90  GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSR 149
           G            L + + +  L  Q+  D++ A   D+      D      Y    +  
Sbjct: 71  GQTDAIAHAV--PLRAALAERGLSPQHAQDLLIAFRRDARQTRYTDWDDIMDYCRYSAMP 128

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLD 208
           +      +    R +           A  I   +      Y R  ++Y PLD L   G+ 
Sbjct: 129 VGRFVLDVHGESRDTWPA--NDALCAALQINNHLQDCGADYRRLDRVYIPLDQLEGRGIA 186

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV---SITESVLK 265
            E+  + + S  +   I   A      L  A+  + + + D   +        +   ++ 
Sbjct: 187 VEALAARKASPALLEVIHHLAAKTEALLGSAQ--LSHGIRDTRLSLEVAGIERLARKIVH 244

Query: 266 HAQNHGFKIVSHSHTPNQ 283
             +      +S     ++
Sbjct: 245 LLKER--DPLSERVHLSK 260


>gi|184156263|ref|YP_001844603.1| putative phytoene/squalene synthase [Lactobacillus fermentum IFO
           3956]
 gi|183227607|dbj|BAG28123.1| putative phytoene/squalene synthase [Lactobacillus fermentum IFO
           3956]
          Length = 149

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 47/143 (32%), Gaps = 2/143 (1%)

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESF 212
           +   IL       + + +   GIA  +  ++  +       + + P  +L    + ++  
Sbjct: 1   MVFCILSRNSIENNRKAVINVGIALQLTNILRDVHEDAMADRYFIPKQLLLKYDIQKQVL 60

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRY-ILPDVFPAF-IPVSITESVLKHAQNH 270
           L  +   +    ++  A L L    +        +      A  + +++ + +L     +
Sbjct: 61  LESKPDIQTQSLLQYLARLALSKYAETDVITNQILDRKGKVALELSINVYKKILTKLMRN 120

Query: 271 GFKIVSHSHTPNQLVRPWYMLSS 293
            F  +S         +   ++ +
Sbjct: 121 NFVDLSKRVYVTPQEKLLLLVKT 143


>gi|153873114|ref|ZP_02001802.1| Squalene/phytoene synthase [Beggiatoa sp. PS]
 gi|152070421|gb|EDN68199.1| Squalene/phytoene synthase [Beggiatoa sp. PS]
          Length = 317

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 70/280 (25%), Gaps = 37/280 (13%)

Query: 42  SPPLYRISLSFLYYFHTELMRVRDTA---------------------RNPITRDMRLQ-W 79
            PP+    +S  Y     +  + D                        +P      L   
Sbjct: 1   MPPILCKVVSNAYLLDRIVDTIEDEPNLTLIQKKQFLQEFIKVVAGDSDPKALSQALFPL 60

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF---DC 136
           + D   ++ K LI        +     + Q    ++    M           SI      
Sbjct: 61  FSDSTLAAEKDLILNIPRVIRLTHSFTLPQRTALHRCVRIMAHGMAEFQQKSSIEGLKTL 120

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVIK------YAGIAQFIGQLICQLPIHY 190
            + +HY + ++  +  + T +        +    +        G +  +  ++  +    
Sbjct: 121 SEMDHYCYYVAGVVGEMLTDLFCDYSPHIAQHKTQLQSLAVSFGQSLQMTNILKDIWEDR 180

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD- 249
            RG  + P DI    G D  +     +       +     +   +L  A      I  + 
Sbjct: 181 QRGACWLPRDIFIQKGFDLTNLSPEHHEPAFGEGLSELIGVAHTHLHNALRYTLLIPANE 240

Query: 250 ---VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
                     + +    L+       +  S         R
Sbjct: 241 KGIRRFCLWALGMAILTLRRINKR--RNFSQGQQVKISRR 278


>gi|23097924|ref|NP_691390.1| hypothetical protein OB0469 [Oceanobacillus iheyensis HTE831]
 gi|22776148|dbj|BAC12425.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 274

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/263 (10%), Positives = 71/263 (26%), Gaps = 41/263 (15%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIF 84
           + L++     Y+   L     R ++   Y     +  + D  A +  ++   L     + 
Sbjct: 13  KVLKETSRTFYIPIKLLNKTLRKTVGSAYLCMRAIDEMEDHEALDSSSKQELLIQTSQLL 72

Query: 85  ESSTKGLI---------AESISPFSVELLSIVRQYDLP-----NQYFLDMIEAHFFDSYN 130
           ++ T   +          + +   ++ L   +                +M E        
Sbjct: 73  QAETFDNVAYQSLIDPYRDILPEVTIRLNDWLLFCPSDIVTQVKSSTSEMAEGMAKWVAR 132

Query: 131 DS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           D  +   +  + Y + ++  +  + + I    +       +    G       ++  +  
Sbjct: 133 DWEVNTKEDLDEYTYYVAGLVGVMLSDIWKWYDGTETDRELAIGYGRGLQAVNILRNIDE 192

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
              RG  +FP D                             E     L    + M  I  
Sbjct: 193 DAERGVGFFPDDWTKK----------------------EMFEYANMNLHMGEQYMEQIST 230

Query: 249 D--VFPAFIPVSITESVLKHAQN 269
              +    IP+++ +  L   + 
Sbjct: 231 KNILLFCRIPLALAQKTLTALEK 253


>gi|322693079|gb|EFY84953.1| squalene synthase [Metarhizium acridum CQMa 102]
          Length = 458

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 82/295 (27%), Gaps = 24/295 (8%)

Query: 12  KEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI 71
           ++    S       R L                   + +S  Y     L  + D    P+
Sbjct: 20  RDPSTESETLKECFRFLNLTSRSFAAVIQELNHELLVPISLFYLVLRGLDTIEDDMTIPL 79

Query: 72  TRD----------MRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQY-----DLPNQY 116
           ++           M +  W+          + E       EL  I   Y     D+  + 
Sbjct: 80  SKKVPLLRNFHNTMEIDGWQYHESQEKDKELLEKFDVVITELKKIKPTYYAIIKDITIKM 139

Query: 117 FLDMIEAHFFD-SYNDSIFDCKQFEHYAFRISSRLIHLATMILD-----SERYSASLRVI 170
              M +    D    + +     +E Y   ++  +    T +       + + +    + 
Sbjct: 140 GHGMADYAQNDEMIKNGVNTIDDYELYCHYVAGLVGEGLTKLFVASELGNPKLAERPSLT 199

Query: 171 KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
           +  G       +I  L   +  G+ ++P +I        E     ++ D+    I     
Sbjct: 200 ESMGQFLQKTNIIRDLREDWSDGRRWYPKEIWSRHVDKWEDLFDPKHEDKALNCISDMVL 259

Query: 231 LGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             LK+  +    M  +          IP  +  + L+    +   ++  +    +
Sbjct: 260 DALKHCEECLFYMAGMREQSVFNFVAIPQGMAIATLELVFRNP-DVLKRNVKITK 313


>gi|291005916|ref|ZP_06563889.1| putative phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
          Length = 227

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 56/177 (31%), Gaps = 7/177 (3%)

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMI--LDSERYS 164
           +R +D+P +   + ++    D              Y   +          +         
Sbjct: 1   MRTWDVPRESVREFMDTIATDLRVTHYPTYTDLRRYVDAVCGHNGLWVNALLSHPPHGTE 60

Query: 165 ASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL----SGQNSDR 220
                  +A     +   +  L      G+ Y PL+ L A G+  +       SG+ ++ 
Sbjct: 61  HCAVHAIHASAGLQLTDYLRDLREDIEDGRCYLPLEDLDAFGISTDDLAEAARSGRMTEP 120

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVS 276
           +   ++  AE    +  +A +  R + P +     + V + +  L+     G  I  
Sbjct: 121 LRELVRFEAERARLHFAQAADWWRSVHPSMRELPRLYVRLGQHGLERITRSGHDIFR 177


>gi|328851394|gb|EGG00549.1| hypothetical protein MELLADRAFT_50370 [Melampsora larici-populina
           98AG31]
          Length = 412

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/302 (8%), Positives = 75/302 (24%), Gaps = 28/302 (9%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRL 77
           +        L                     +   Y     +  + D        ++  L
Sbjct: 48  KSMKECWTFLDQTSRSFSAVIKQLEGELSRVICIFYLILRGMDTIEDDMTIEIKLKEKIL 107

Query: 78  QWWKDIFESSTK----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS- 132
           + +    E                   +   S++ ++ L +  + ++I        +   
Sbjct: 108 KTFYQKLEEPGWRFDGCGPDAKDRHLLLGFDSVIEEFQLLDPSYRNVISEVTARMGSGMS 167

Query: 133 --------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YA 173
                         I     F+ Y   ++  +    + +        S+   +       
Sbjct: 168 QFSRMAYENQGIFSIDTMTSFDSYCHYVAGLVGEGLSRLFAQSNKEDSMIGHQLTLSNSM 227

Query: 174 GIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGL 233
           G+      ++         G++++P +I        +     +N  +   A+       L
Sbjct: 228 GLLLQKTNILRDFREDVDDGRMFWPKEIWNKYVEHPKDLTKPENLQKARWALTEMTIDAL 287

Query: 234 KYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
            +   A E M  +          IP  +  + L+        +   +    + +    M+
Sbjct: 288 SHSTDALEYMTMLKNQSIFNFCAIPQVMAIATLEK-CFDNLDVFHKNVKIRRSMTVDLMM 346

Query: 292 SS 293
            +
Sbjct: 347 KA 348


>gi|154322252|ref|XP_001560441.1| hypothetical protein BC1G_01273 [Botryotinia fuckeliana B05.10]
 gi|150850520|gb|EDN25713.1| hypothetical protein BC1G_01273 [Botryotinia fuckeliana B05.10]
          Length = 482

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 79/302 (26%), Gaps = 30/302 (9%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           T++  KE +          + L               P   + ++  Y     L  + D 
Sbjct: 32  TRDPSKEPQSLKD----CFKYLELTSRSFSSVIQELNPELLVPVALFYLVLRGLDTIEDD 87

Query: 67  ARNPITRDMRLQWWKDIF-----ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
              P+ +   L    D        S  +    E      V    ++ ++      +  +I
Sbjct: 88  MTIPLGKKEPLLRAFDSIIEEDGWSFNENGPNEKDRELLVHFDCVITEFKKCKPAYQVII 147

Query: 122 EAHFFDSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSASL- 167
           +       N                   K +E Y   ++  +    T +    +++    
Sbjct: 148 KDITKKMGNGMADYANNAEHNINGVNTIKDYELYCHYVAGLVGDGLTRLFIEAKFANPAL 207

Query: 168 ----RVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
                + +  G       +I  +   +   + ++P +I        +     +N      
Sbjct: 208 LGKPELSESMGQFLQKTNIIRDIREDFDDKRRFWPKEIWSKHVDKFDDLFDPKNRQIALN 267

Query: 224 AIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
                    L++  +    M  I          IP ++  + L+    +   I   +   
Sbjct: 268 CSSEMVLNSLRHADECLFYMAGIKDQSVFNFVAIPQAMAIATLELVFQNPA-IFEKNVKI 326

Query: 282 NQ 283
            +
Sbjct: 327 TK 328


>gi|327298643|ref|XP_003234015.1| squalene synthetase [Trichophyton rubrum CBS 118892]
 gi|326464193|gb|EGD89646.1| squalene synthetase [Trichophyton rubrum CBS 118892]
          Length = 471

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/263 (10%), Positives = 77/263 (29%), Gaps = 27/263 (10%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           T++  KE    +         L+          +   P   + +   Y     L  V D 
Sbjct: 31  TRDPSKE----TETEKKCYEFLKLTSRSFSAVIMELHPELLMPVCLFYLILRGLDTVEDD 86

Query: 67  ARNP-ITRDMRLQWWKDIFES----STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
              P  T++  L+ +KDI E      T+    E      V+  +++ ++      +  +I
Sbjct: 87  TSIPLETKEPILRGFKDILEEDGWTFTENRPEEKDRELLVQFHNVITEFKKIKPAYKVII 146

Query: 122 EAHFFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
           +                    ++ +   + ++ Y + ++  +    T +     ++    
Sbjct: 147 KDITEKMGNGMADYIRRGEEDDEIVKTVEDYDLYCYYVAGLVGEGLTRLFVEAGFARPEL 206

Query: 169 VIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
           + +       G       +I  +   +   + ++P +I      +       +   +   
Sbjct: 207 LERPELFISMGRFLQKTNIIRDVREDHDDKRRFWPREIWSRHVKEFSDLFKPEFRQQALN 266

Query: 224 AIKIFAELGLKYLFKAREEMRYI 246
                    L ++      +  +
Sbjct: 267 CNSDMILNALSHVEDCIYYLSAL 289


>gi|146414413|ref|XP_001483177.1| hypothetical protein PGUG_05132 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 450

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 77/308 (25%), Gaps = 30/308 (9%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPI 71
           E              L               P  R+++   Y     L  V D       
Sbjct: 31  EPTEARSSLKRCDDLLNLTSRSFAAVIKELHPKTRVAVMVFYLVLRALDTVEDDMTLQHD 90

Query: 72  TRDMRLQWWKDIFE----SSTKGLIAESISPFSVELLSIVRQYDL--------PNQYFLD 119
            +   L+ +         S       E      V+   I+ +Y            +    
Sbjct: 91  VKIPLLRQFHTKLNTTDYSFNGSGPNEKDREVLVQFPEILAEYHRLDSEFQDVIKEITDK 150

Query: 120 MIEAHFFDSYNDSI-----FDCKQFEHYAFRISSRLIHLATMILDSERY------SASLR 168
           M         +D+         K ++ Y   ++  +    T I+    +        + +
Sbjct: 151 MGNGMADYILDDNFNTNGVATVKDYDLYCHYVAGLVGEGLTKIMAHANFINESLNQDNYQ 210

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLA---I 225
             +  G+      +I         G+ ++P +I         SF   Q+      A   I
Sbjct: 211 KSESMGLFLQKTNIIRDYQEDMQDGRSFWPQEIWLKYTNSLASFHKDQSEKSQEQALYCI 270

Query: 226 KIFAELGLKYLFKAREEMRYI-LPDVFP-AFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  + ++      +  +  P  F    IP  +  + L    N+   +        +
Sbjct: 271 SELVLNAMNHINDVLVYLANVNDPSCFSFCAIPQVMAVATLATVYNNP-DVTHKVVKIRK 329

Query: 284 LVRPWYML 291
                 +L
Sbjct: 330 GTTVKLIL 337


>gi|193718447|ref|XP_001950787.1| PREDICTED: bifunctional enzyme CarRP-like [Acyrthosiphon pisum]
          Length = 588

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/338 (11%), Positives = 97/338 (28%), Gaps = 61/338 (18%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACL--LSPPLYRISLSFLYYFHTE 59
           +L+    +        ++D    ++ L              L     R+ L  LY F   
Sbjct: 252 MLRAFMTSEYATPSAVTQDIKTSIKVL---STSNAFGTSNYLFHAGIRLDLIILYAFCRV 308

Query: 60  LMRV-------------------------RDTARNPITR----DMRLQWWKDIFESSTKG 90
              +                          D   +   +    ++++ W    +ES    
Sbjct: 309 TDEMFDSKSDEKKKKLKLELSKQFISEVFADRKSDYDVKKTPQEVKIDW--KKYESEFTD 366

Query: 91  LIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL 150
           +   S    S         + LP + F ++   + +D     + + K    Y   ++  +
Sbjct: 367 VELSSYRAVSRI------AFFLPRKPFEELFAGYQWDLEFTLVRNEKDLMLYTTYVAGSI 420

Query: 151 IHLATMILDSERYSASLRVIKYA----------GIAQFIGQLICQLPIHYHR-GQLYFPL 199
             +   ++     +    ++  A          G    +  +   L       G+ YFP 
Sbjct: 421 GAMCLYVIMYRYGNDMNDLVDKADYLTKHAYKIGQGLQLVNIARDLVSDSESLGRCYFPA 480

Query: 200 DILGAVG-----LDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV-FPA 253
           + +         L +E       + ++        +L  K  F++   ++Y+  D+    
Sbjct: 481 EYMDDEKEDLRILCKEKNPRSLGNKKLKKYSSKMIQLANKQQFESMGAIKYLPQDLIGSV 540

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
                +   ++K  Q+          +  +L +   +L
Sbjct: 541 LASTEMYRGLIKAIQSCP--TYPTRASLPKLSKLLIVL 576


>gi|296818525|ref|XP_002849599.1| squalene synthetase [Arthroderma otae CBS 113480]
 gi|238840052|gb|EEQ29714.1| squalene synthetase [Arthroderma otae CBS 113480]
          Length = 471

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/248 (8%), Positives = 64/248 (25%), Gaps = 23/248 (9%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL---- 77
                 L+      Y   +   P   + +   Y     L  V D    P+     L    
Sbjct: 42  KKCYEFLKLTSRSFYAVIMELHPELLMPICLFYLVLRGLDTVEDDTSIPLDSKEPLLRGF 101

Query: 78  -QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS---- 132
               ++   S T     E      V+  +++ ++      +  +I+       N      
Sbjct: 102 KDILEEDGWSFTGNRPEEKDRELLVQFHNVITEFKKIKPAYKAIIKDIADKMGNGMADYA 161

Query: 133 ---------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQF 178
                    +     ++ Y + ++  +    T +     ++    + +       G    
Sbjct: 162 RRGERDEEIVKTIDDYDLYCYYVAGLVGEGLTRLFVEAGFARPELLDRPELFISMGRFLQ 221

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
              +I  +   +   + ++P +I      +       +   +            L ++  
Sbjct: 222 KTNIIRDVREDHDDKRRFWPREIWSRHVKEFGDLFKPEFRQQALNCSSDMVLNALSHVEH 281

Query: 239 AREEMRYI 246
               +  +
Sbjct: 282 CIYYLSAL 289


>gi|302666861|ref|XP_003025026.1| hypothetical protein TRV_00831 [Trichophyton verrucosum HKI 0517]
 gi|291189106|gb|EFE44415.1| hypothetical protein TRV_00831 [Trichophyton verrucosum HKI 0517]
          Length = 436

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/252 (9%), Positives = 69/252 (27%), Gaps = 23/252 (9%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMR 76
           +         L+          +   P   + +   Y     L  V D    P  T++  
Sbjct: 3   TETEKKCYEFLKLTSRSFSAVIMELHPELLMPVCLFYLILRGLDTVEDDTSIPLETKEPI 62

Query: 77  LQWWKDIFESSTKGLIAES----ISPFSVELLSIVRQYDLPNQYFLDMI----------- 121
           L+ +KDI E                   V+  +++ ++      +  +I           
Sbjct: 63  LRGFKDILEEDGWTFTGNRPEEKDRELLVQFHNVITEFKKIKPAYKVIIKDITEKMGNGM 122

Query: 122 -EAHFFDSYNDSI-FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +       +D I    + ++ Y + ++  +    T +     ++    + +       G
Sbjct: 123 ADYIRRGQEDDEIVKTIEDYDLYCYYVAGLVGEGLTRLFVEAGFARPELLERPELFISMG 182

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
                  +I  +   +   + ++P +I      +       +   +            L 
Sbjct: 183 RFLQKTNIIRDVREDHDDKRRFWPREIWSRHVKEFGDLFKPEFRQQALNCNADMILNALS 242

Query: 235 YLFKAREEMRYI 246
           ++      +  +
Sbjct: 243 HVEDCIYYLSAL 254


>gi|187250588|ref|YP_001875070.1| squalene synthetase [Elusimicrobium minutum Pei191]
 gi|186970748|gb|ACC97733.1| Squalene synthetase [Elusimicrobium minutum Pei191]
          Length = 340

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 84/267 (31%), Gaps = 36/267 (13%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK---D 82
             L+       L+  + P  +R + S  Y        V DT  + I  + RL W +   D
Sbjct: 11  DLLKKTARTLELSAKVLPSGFRETFSIAYLVCRCADTVADT--DLIDFERRLFWIERFPD 68

Query: 83  IFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN------------ 130
           I   +  G I + I   S + L    ++ L    F+  I                     
Sbjct: 69  IINKNKSGEIEKIIKEVSSDSLKQNERFLLQKIPFVAKIYGMLNKEDKELVFDILKKVCE 128

Query: 131 --------------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA-----SLRVIK 171
                           +   ++ E+Y   +        + ++      A      + + +
Sbjct: 129 GMSFDLKTFKKGGLTCLKTKEELEYYCDTMGGAPGVFWSKLILKYTPVALDKDSFINMGR 188

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G A  I  ++  +    + G+ YFP D L   G+ RE   +   S+ +   +K +   
Sbjct: 189 NVGRALQIVNVLRDIKEDLNNGRCYFPEDELRTAGVKREDLKNKILSEELLDVLKKWIVW 248

Query: 232 GLKYLFKAREEMRYILPDVFPAFIPVS 258
           G   +       + I    +   I V+
Sbjct: 249 GRDNIGSGSAFYKAIPVKQWQIRISVA 275


>gi|303279486|ref|XP_003059036.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460196|gb|EEH57491.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 228

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 44/122 (36%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQ 78
               + L  +R  DY+ YL  L  P   R     L  F+ E       A  P    MRLQ
Sbjct: 101 AAFKYCLDLVRAHDYENYLCTLALPTRARHVALALRAFNVETANALGAASEPHLASMRLQ 160

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
           +W+D   +   G  ++   P +V L  ++       + +L+ I        +   F   +
Sbjct: 161 FWRDALPAIHAGDASKHRHPVAVALSRVLPAGGARAKRWLNSIVDARMKVRSIHWFPYDR 220

Query: 139 FE 140
             
Sbjct: 221 VR 222


>gi|302408883|ref|XP_003002276.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261359197|gb|EEY21625.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 376

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 19/185 (10%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
             +   +  R L   DYD +L     PP  R +   L   + EL+R+ +   NP    MR
Sbjct: 32  VDKARKYCQRQL--HDYDAHLIQRTLPPHVRDAYLALRTLNLELVRLPEVVTNPTIGAMR 89

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIV--------------RQYDLPNQYFLDMIE 122
           +Q+W++  + +  G       P  V L   +                      +   +I 
Sbjct: 90  MQFWRESIDKTFAGNP--PAEPTCVLLHEAITSLQSRSNGSGSARAAATQMKFWIQRVIR 147

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQL 182
                  N         E YA    + L++     L  +   A   +  + G A  I  +
Sbjct: 148 TRERHMDNRPFATLASLEEYAENTYATLMYATLAALPVQSVHA-DHLASHIGKAAGIVAV 206

Query: 183 ICQLP 187
           +  +P
Sbjct: 207 LRGVP 211


>gi|298704820|emb|CBJ48968.1| Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene
           synthase; probably two separate ORFs [Ectocarpus
           siliculosus]
          Length = 691

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 66/293 (22%), Gaps = 28/293 (9%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT---ARNPITRD 74
             D  F    L  +           P +    +   Y     L  V D      +   + 
Sbjct: 317 DSDVAFCNDMLGKVSRSFAAVIRQLPKMLATDIVVFYLVLRGLDTVEDDMTAFDDIQVKI 376

Query: 75  MRLQWWKDIFESSTKGLIAE--------------SISPFSVELLSIVRQYDLPN-QYFLD 119
             L  + +         +                S++     L    ++      +    
Sbjct: 377 KLLTKFHETALVDRAWKLEGVGQGDERVLLERFSSVTAVFQSLSQGSQEVISDITKRMGA 436

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS-----LRVIKYAG 174
            +                 ++ Y   ++  +    T +  +             +    G
Sbjct: 437 GMAEFVSKDLGQGTTSTVDYDEYCHYVAGLVGDGLTRLFVATGIEGQELLLAPELANSMG 496

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE--SFLSGQNSDRISLAIKIFAELG 232
           +      +I      Y  G+ ++P D+        +   F   Q  D     +       
Sbjct: 497 LFLQKTNIIRDYLEDYVDGRAFWPQDVWKKHAKTGQLGEFALPQFRDNALACLNELVTDA 556

Query: 233 LKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L  +      MR I          IP  +  + L    N+   +        +
Sbjct: 557 LALVPDCLAYMRQIKDPEVFRFCAIPQVMAIATLAEIYNNP-DVFRGVVKIRK 608


>gi|213406287|ref|XP_002173915.1| squalene synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212001962|gb|EEB07622.1| squalene synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 467

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 85/303 (28%), Gaps = 29/303 (9%)

Query: 9   NTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA- 67
           N  K+E I   D       L+          +   P  RI++   Y     L  + D   
Sbjct: 24  NFEKDETI-PGDLRRCYEFLKLTSRSFAAVIMELTPELRIAVMIFYLVLRGLDTIEDDMT 82

Query: 68  -RNPITRDMRLQWWKDIFESSTKGL---IAESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
                 + + L ++K I +           E      VE   ++ +Y    Q + D+I +
Sbjct: 83  ISLEKKKPLLLDFYKFIEQPGWNFKESGPNEKDRQLLVEFEVVIAEYHNLKQGYRDVISS 142

Query: 124 HFFDS------------YNDSI--FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRV 169
              +              +D       + F+ Y   ++  +    + +  +         
Sbjct: 143 IAKEMGSGMAKYATLAEEHDGYSVESLEDFDMYCHYVAGLVGEGLSRLFANSDLETKDLA 202

Query: 170 IK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +       G+      +I      +   + ++P  I      D  SF    N   +   
Sbjct: 203 KQPALSNSVGLFLQKTNIIRDYREDFEDKRQFWPRAIWSKYTDDFGSFCEPGNVKALY-C 261

Query: 225 IKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
           +       L++   A E +  +          IP  +  + L     +  +    +    
Sbjct: 262 LSEIVANALEHAPSAIEYLCQLQNQQVFNFVAIPQCMAIATLAAVFKNP-ETFQTNVKIR 320

Query: 283 QLV 285
           +  
Sbjct: 321 KGQ 323


>gi|224994873|gb|ACN76558.1| lycopene cyclase [Rhodosporidium sp. 1004]
          Length = 434

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 65/280 (23%), Gaps = 71/280 (25%)

Query: 5   FLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVR 64
           F +      +    RD    ++ L +     ++A    P   R  L  LY F      + 
Sbjct: 93  FFSSRPYSSQP--KRDLELAVKLLEEKSRSFFVASAGFPSEVRERLVGLYAFCRVTDDLI 150

Query: 65  DTARNPITRDMRLQWWKDIF-------------ESSTKGLIAESISP------------- 98
           D+          +    D               +      +     P             
Sbjct: 151 DSPEVSSNPHATIDMVSDFLTLLFGPPLHPSQPDKILSSPLLPPSHPSRPTGMYPLPPPP 210

Query: 99  ------------------------FSVELLSIVRQYDLP---NQYFLDMI---EAHFFDS 128
                                      +L  ++ +Y L      Y  D+I         +
Sbjct: 211 SLSPAELVQFLTERVPVQYHFAFRLLAKLQGLIPRYPLDELLRGYTTDLIFPLSTEAVQA 270

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMILD----------SERYSASLRVIKYAGIAQF 178
               I        Y   ++  +  L   +             E   A L   +  G A  
Sbjct: 271 RKTPIETTADLLDYGLCVAGSVAELLVYVSWASAPSQVPATIEEREAVLVASREMGTALQ 330

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNS 218
           +  +   +      G+ Y P   L   GL  ES L+    
Sbjct: 331 LVNIARDIKGDATEGRFYLP---LSFFGLRDESKLAIPTD 367


>gi|290998469|ref|XP_002681803.1| squalene synthase [Naegleria gruberi]
 gi|284095428|gb|EFC49059.1| squalene synthase [Naegleria gruberi]
          Length = 448

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 68/303 (22%), Gaps = 40/303 (13%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR----NPITRDM 75
              F    L  +     +     P   +  ++  Y     L  V D       NP  +  
Sbjct: 33  SLKFCYDKLNQVSRSFAMVIQELPDELKHPVAIFYLVLRGLDTVEDDTEYLKENPEAKHE 92

Query: 76  RLQWWKDIFE----------------SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            L+ +                     +    L+        + L    +   +     + 
Sbjct: 93  LLRTFYQKIRNPNFHLENCGGSLNATAHYADLMLHFDHVCKIFLSLDQKYQAVIEDVTMK 152

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI--------- 170
           M            +   K ++ Y   ++  +    + +  +                   
Sbjct: 153 MGCGMVDYLGMTGVDTVKDYDEYCHYVAGLVGIGLSDMFTAFGEDKQALFKVGLSGSSED 212

Query: 171 -------KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGL-DRESFLSGQNSDRIS 222
                     G+      +I         G+ ++P       GL         +N  +  
Sbjct: 213 PLKKSLSNLMGLFLQKVNIIRDYAEDIEEGRTFYPSSAFQQFGLTQVTDLKDPKNLPQAL 272

Query: 223 LAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHT 280
             +       L +     E M  I          IP  +  + L    N+   +   +  
Sbjct: 273 KTLNYLVTDALSHAPDCLEYMSSIKDPKVFSFCAIPQVMAIATLVEIYNNP-NVFVKNVK 331

Query: 281 PNQ 283
             +
Sbjct: 332 IRK 334


>gi|294500619|ref|YP_003564319.1| squalene/phytoene synthase [Bacillus megaterium QM B1551]
 gi|294350556|gb|ADE70885.1| squalene/phytoene synthase [Bacillus megaterium QM B1551]
          Length = 272

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 71/259 (27%), Gaps = 36/259 (13%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L++     ++     P   + ++   Y     +  + D        +   L    D+ +
Sbjct: 14  MLKETSRTFFIPISHLPAELQDAVGSAYLCMRAIDEIEDHPELEAGVKSRLLYAISDLLK 73

Query: 86  SSTKGL-------IAESISP-FSVELLSIVRQYDLPNQYF-----LDMIEAHFFDSYNDS 132
            S             ++  P  +++L + +                 M +        D 
Sbjct: 74  KSFNEDEYMALVGPYQADLPDVTLQLGNWIALCPTGVADQVLDATSIMAKGMADWVEKDW 133

Query: 133 I-FDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
              +    + Y F ++  +  +   I    +       +    G       ++       
Sbjct: 134 HIQNEADLDDYTFYVAGLVGVMLNDIWKWYDGTETDKELAIAFGRGLQSVNILRNTSEDS 193

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG  +FP +        RE   +             +A   L    K  E+++ +   +
Sbjct: 194 ERGVSFFPNNW------SREDMFA-------------YARRNLSLGKKYLEDVKSLPI-L 233

Query: 251 FPAFIPVSITESVLKHAQN 269
               IP+++ +  L     
Sbjct: 234 HFCKIPLALADGTLNALMK 252


>gi|310796397|gb|EFQ31858.1| farnesyl-diphosphate farnesyltransferase [Glomerella graminicola
           M1.001]
          Length = 464

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 79/299 (26%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            R++             +L               P   + +   Y     L  + D    
Sbjct: 27  HRRDPSKEDPTLRACFEHLNKTSRSFSAVIQELNPELLVPVCLFYLVLRGLDTIEDDMTL 86

Query: 69  NPITRDMRLQWWKDIF----ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +   ++  L+ +         + TK    E      V    ++ +     + + D+I+  
Sbjct: 87  SIEEKEPLLREFDQYMVKDGWTFTKNGPNEKDRDLLVHFDDVITELKKIKKPYFDVIKDI 146

Query: 125 FFDSYNDS-------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                N               +   K++E Y   ++  +    T +      +    + +
Sbjct: 147 TIKMGNGMADYAKNAAFNEQGVATIKEYELYCHYVAGLVGDGLTRLFVEGNMANPKLLER 206

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G       +I  +   Y   + ++P DI        +     +N  +      
Sbjct: 207 PELTESMGQFLQKTNIIRDVHEDYLDKRRFWPKDIWSKHVDTWDDLFKPENQRKALECSS 266

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 LK+  +    M  I          IP S+  + L+    +   I +      +
Sbjct: 267 EMVLNALKHTEECLFYMAAIKDQSVFNFVAIPQSMAIATLELVFRNPA-IFNSHIKITK 324


>gi|226289452|gb|EEH44958.1| squalene synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 472

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/298 (10%), Positives = 86/298 (28%), Gaps = 26/298 (8%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
            ++EK+ ++        L+          L   P   + +   Y     L  + D    P
Sbjct: 32  ERDEKLETQTEKICFHFLKLTSRSFSAVILELHPELLLPVCLFYLILRGLDTIEDDTSIP 91

Query: 71  -ITRDMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQY------------DLP 113
             T++  L+ + +  +            E      V+  +++ ++            D+ 
Sbjct: 92  LRTKEPLLRNFHNFLDEDGWSFNGNRPEEKDRELLVQFHNVISEFKKINLAYRTIIKDIA 151

Query: 114 NQYFLDMIEAHFF-DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK- 171
            +    M +     +     +   ++++ Y + ++  +    T +     ++    + + 
Sbjct: 152 KRMGNGMADYCRKAELETAKVKTIEEYDLYCYYVAGLVGEGLTRLFVEAGFANPALLNRP 211

Query: 172 ----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G+      +I  +   +   + ++P +I      + E     +N          
Sbjct: 212 ELYISMGLFLQKTNIIRDVKEDHVDKRCFWPKEIWSKHVNEFEDLFKPENRAAALNCNAE 271

Query: 228 FAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L +  K    +  +          IP S+  + L         I   +    +
Sbjct: 272 MILNALDHADKCLFYLAGLKEQSIFNFCAIPQSMAIATL-ELCFRNETIFERNVKITK 328


>gi|320589748|gb|EFX02204.1| squalene synthetase [Grosmannia clavigera kw1407]
          Length = 461

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 77/299 (25%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R++    +       ++L               P   +S+   Y     L  + D    
Sbjct: 31  HRRDASKETPTEKACFQHLVLTSRSFAAVIQELTPELLMSVCLFYLVLRGLDTIEDDMTI 90

Query: 70  PITRDM-RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
           P+ + +  L+ + D+ E           +    ELL          +       A   D 
Sbjct: 91  PLEKKVPLLRGFDDLMEQDGWTFTENGPNEKDRELLVHFDDVVTELKRLNPAYYAIIRDI 150

Query: 129 YNDS-----------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                                I    ++E Y   ++  +    T +    + +    + +
Sbjct: 151 TTKMGNGMADYALNAEQSVNGIATIAEYELYCHYVAGLVGEGLTRLFVESKLANPQLMNR 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G       +I  +   +  G+ ++P DI        +      +  +      
Sbjct: 211 PQLTESMGQFLQKTNIIRDIHEDFEDGRRFWPKDIWSKYVDRFDDLFDPAHLQQALYCQS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 LK+       M  I          IP ++  + L+    +   +   +    +
Sbjct: 271 EMVLNALKHAEDCLFYMAAIREQSVFNFVAIPQTMAIATLELVFQNP-DVFKRNVKITK 328


>gi|172041078|ref|YP_001800792.1| putative phytoene synthase [Corynebacterium urealyticum DSM 7109]
 gi|171852382|emb|CAQ05358.1| putative phytoene synthase [Corynebacterium urealyticum DSM 7109]
          Length = 343

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/304 (9%), Positives = 60/304 (19%), Gaps = 34/304 (11%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
               EK  +         +R       +A  L     R  +  LY        V D    
Sbjct: 25  PSPTEKYATVAQRAAAEVIRGYSTSFSMASSLLREPVRTHVRNLYAMVRVADEVVDGVAA 84

Query: 69  ----NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAH 124
               N       L  ++             S             +  L +    D   + 
Sbjct: 85  GAGLNTEATRACLDAYEQAV--YQACDRGFSTDLVLHAFARTANECGLEDADLRDFFTSM 142

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----------YA 173
             D+      D    + Y    +  +  +   I  ++                       
Sbjct: 143 RQDTLVAVH-DAASVDSYVHGSAEVIGLMCNAIFAADSAGRGRPWSAQRRSQANEGALAL 201

Query: 174 GIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLS--------GQNSDRISLA 224
           G A      +  +     + G+ Y   + +                     + +   +  
Sbjct: 202 GRAFQKVNFLRDMAEDTQKLGRNYVSGEAMTDQPASPGDPSHTNNATSSTPRETPAPAPL 261

Query: 225 IKIF----AELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA--QNHGFKIVSHS 278
                          L  A   +  +               + L     Q    +I+S  
Sbjct: 262 TAQQKAAHIADIRADLALANSAISLLPATARAGVAAAHALFAELTELLDQASVAEIMSGR 321

Query: 279 HTPN 282
              +
Sbjct: 322 IRVS 325


>gi|171911724|ref|ZP_02927194.1| squalene/phytoene synthase [Verrucomicrobium spinosum DSM 4136]
          Length = 341

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 81/303 (26%), Gaps = 47/303 (15%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMRLQWWKDIF 84
           + L  +    YL     P   R  LS  Y        + DT + P   R   L  ++   
Sbjct: 10  KLLEGVSRSFYLTLKALPQGLREPLSLAYLLARAADTMADTIQVPDAVRLTCLAEFERRV 69

Query: 85  ESSTKGLIAE----------------SISP--FSVELLSIVRQYDLPNQYFLDMIEAHFF 126
               +  IAE                          L   +  + +  +     +     
Sbjct: 70  RLPLRDPIAEGVLVARLLVDFVPHQEDAHEARLLERLQEAMNAFHVSPEGQKSAMMGVLG 129

Query: 127 DSYNDSI---------------FDCKQFEHYAFRISSRLIHLATMILDSERY-------- 163
                 +                  +  + Y + ++  +    T +  +E          
Sbjct: 130 PIIQGQMLDIQRFPGDGQLRALATTRDLDDYTYLVAGCVGEFWTRLCATEAEGSFNEGVS 189

Query: 164 -SASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRIS 222
               ++     G    +  ++         G+ Y P + L   GL   +  +     ++ 
Sbjct: 190 LDEMVKRGIRYGKGLQLVNILRDPGKDLKLGRCYIPEEALQTAGLSVAAVQADPA--KLM 247

Query: 223 LAIKIFAELGLKYLFKAREEMRYIL--PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHT 280
             +  + +L  ++L +    +  +     ++   +P+ +    L   +   +  +     
Sbjct: 248 PLLTPWKKLCREHLHEGMRYLDEVSNKRLLYATALPLLLGIKTLALIEAADWPTLQAGVK 307

Query: 281 PNQ 283
            ++
Sbjct: 308 VSR 310


>gi|282901297|ref|ZP_06309223.1| Squalene/phytoene synthase [Cylindrospermopsis raciborskii CS-505]
 gi|281193792|gb|EFA68763.1| Squalene/phytoene synthase [Cylindrospermopsis raciborskii CS-505]
          Length = 275

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/266 (10%), Positives = 74/266 (27%), Gaps = 43/266 (16%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           L+ L++     Y+   + P   + +++  Y     +  + D       T+ + LQ     
Sbjct: 8   LQILKETSRTFYIPISIMPSGLQEAVASAYLCMRAIDEIEDHPTLENHTKGILLQSISQT 67

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF-----------------F 126
            ++   G   ++ S         + +  +  + +  +                      +
Sbjct: 68  LQAGVDGFAVDAFSMGFKGYEDSLPEVSVRIREWAILAPESIAPRIWDATAAMADRMAYW 127

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
              N  I +    + Y F ++  +  L + +    +  + +       G       ++  
Sbjct: 128 SQINWQIKNEYDLDRYTFGVAGAVGLLLSDLWSWYDGTTTNRMEAIAFGRGLQAVNILRN 187

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 RG  +FP                           +   +   ++L  A      
Sbjct: 188 NSEDLTRGVNFFPEGWN----------------------HQDLQQYARRHLALADSYTNS 225

Query: 246 IL--PDVFPAFIPVSITESVLKHAQN 269
           +   P +    IP+++    L    N
Sbjct: 226 LPPGPALQFCQIPLALAHGTLDALAN 251


>gi|47224313|emb|CAG09159.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 444

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/248 (9%), Positives = 63/248 (25%), Gaps = 15/248 (6%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           ++  S         L                  R ++   Y     L  V D    P+ +
Sbjct: 71  QESMSESLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSIPLDK 130

Query: 74  DM-RLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
            +  L  +                      E     S+E  ++ + Y          +  
Sbjct: 131 KVPMLNDFHTYLYQHDWCFTESQEKDRQVLEDFPTISLEFRNLAQVYRDVISEICHRMGV 190

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQF 178
              +    ++   K+++ Y   ++  +    + +  + +                G+   
Sbjct: 191 GMAEFLEKNVGSMKEWDLYCHYVAGLVGVGLSKLFSASKLEDPEVGQDTELANSMGLFLQ 250

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
              +I         G+ ++P +         E F   +  D     + +     L+++  
Sbjct: 251 KTNIIRDYLEDTQEGRAFWPQEAWSQFAGRLEDFAQPEKLDSALSCLNLLVTDALRHVPD 310

Query: 239 AREEMRYI 246
               +  +
Sbjct: 311 VIAYLSRL 318


>gi|15789869|ref|NP_279693.1| FdfT [Halobacterium sp. NRC-1]
 gi|10580267|gb|AAG19173.1| farnesyl-diphosphate farnesyltransferase [Halobacterium sp. NRC-1]
          Length = 390

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 77/306 (25%), Gaps = 40/306 (13%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
           R+  +  + D  +    ++D+     L            +   Y        V D    P
Sbjct: 47  RQSHQPTASDREWCHSAVQDVSRTFALTIDALEEPMATRICVGYLLCRVADTVEDATAMP 106

Query: 71  ITRDMRLQWWKDIF----------ESSTKGLIAESISP------------FSVELLSIVR 108
            T   +L    D            E            P                  S+  
Sbjct: 107 PTEQAQLLETYDAALDPDCGTTVAEFQAAVGDHVPSEPNADWRVVANTTRVVSAFESLDD 166

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDS-------IFDCKQFEHYAFRISSRLIHLATMI---- 157
                 +  +  +                  I    + E Y + ++  +  L T +    
Sbjct: 167 AAKAAIRPTVREMATGMASFVQRYADAGGLRIQSPTELEEYCWYVAGTVGELVTELLARD 226

Query: 158 LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQ 216
             S+  +A     +   +   +  +   +   Y     +Y P + L    L  E     +
Sbjct: 227 APSDAAAAMRENARSFALLLQLVNVAKDVRPDYEEENNVYLPQEWLDDHDLAPEDVADPE 286

Query: 217 NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL-----KHAQNHG 271
           ++ R++  ++   +    Y+  A+  +  +        +       +L     +   N  
Sbjct: 287 HAGRVASVVERVTDRARGYVADAQRWLEVMP-TSQGNTLAAWAVPFLLAVGTMRELGNRP 345

Query: 272 FKIVSH 277
             +V  
Sbjct: 346 ADVVRE 351


>gi|9255840|gb|AAF86325.1| putative phytoene synthase [Mycobacterium marinum]
 gi|118766916|gb|ABL11384.1| CrtB [Mycobacterium marinum]
 gi|118766926|gb|ABL11389.1| CrtB [Mycobacterium marinum]
          Length = 151

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 62  RVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI 121
              D   +  TR  RLQ                  +P    +    R+Y +    F D +
Sbjct: 3   DSFDPLLDTDTRARRLQQ----LAQQFFSGADHPDNPVLAAVSHTARRYGIGADLFEDFL 58

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIH-LATMILDSERYSASLRVIKYAGIAQFIG 180
           E+   D       D      Y    +  +   L  ++        ++      G A  + 
Sbjct: 59  ESMRMDLTITDYPDRDALNTYMRGSAEAIGLQLLPILGTVVPAQEAIPYAAALGRAFQLT 118

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
             I  +     R ++Y P D L A G+DR+  +
Sbjct: 119 NFIRDVDEDLARNRVYLPADELAAYGVDRDVLM 151


>gi|225681326|gb|EEH19610.1| squalene synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 472

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/298 (10%), Positives = 86/298 (28%), Gaps = 26/298 (8%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
            ++EK+ ++        L+          L   P   + +   Y     L  + D    P
Sbjct: 32  ERDEKLETQTEKICFHFLKLTSRSFSAVILELHPELLLPVCLFYLILRGLDTIEDDTSIP 91

Query: 71  -ITRDMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQY------------DLP 113
             T++  L+ + +  +            E      V+  +++ ++            D+ 
Sbjct: 92  LRTKEPLLRNFHNFLDEDGWSFNGNRPEEKDRELLVQFHNVISEFKKINLAYRTIIKDIA 151

Query: 114 NQYFLDMIEAHFF-DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK- 171
            +    M +     +     +   ++++ Y + ++  +    T +     ++    + + 
Sbjct: 152 KRMGNGMADYCRKAELETAKVKTIEEYDLYCYYVAGLVGEGLTRLFVEAGFANPALLNRP 211

Query: 172 ----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
                 G+      +I  +   +   + ++P +I      + E     +N          
Sbjct: 212 ELYISMGLFLQKTNIIRDVKEDHVDKRCFWPKEIWSKHVNEFEDLFKPENRAAALNCNAE 271

Query: 228 FAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                L +  K    +  +          IP S+  + L         I   +    +
Sbjct: 272 MILNALDHADKCLFYLAGLKEQSIFNFCAIPQSMAIATL-ELCFRNETIFERNVKITK 328


>gi|295705972|ref|YP_003599047.1| squalene/phytoene synthase [Bacillus megaterium DSM 319]
 gi|294803631|gb|ADF40697.1| squalene/phytoene synthase [Bacillus megaterium DSM 319]
          Length = 272

 Score = 75.5 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 71/259 (27%), Gaps = 36/259 (13%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L++     ++     P   + ++   Y     +  + D        +   L    D+ +
Sbjct: 14  MLKETSRTFFIPISHLPAELQNAVGSAYLCMRAIDEIEDHPELEAGVKSRLLYAISDLLK 73

Query: 86  SSTKGL-------IAESISP-FSVELLSIVRQYDLPNQYF-----LDMIEAHFFDSYNDS 132
            S             ++  P  +++L + +                 M +        D 
Sbjct: 74  KSFNEDEYMALVGPYQADLPDVTLQLGNWIALCPTGVADQVLDATSIMAKGMADWVEKDW 133

Query: 133 I-FDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIHY 190
              +    + Y F ++  +  +   I    +       +    G       ++       
Sbjct: 134 HIQNEADLDDYTFYVAGLVGVMLNDIWKWYDGTETDKELAIAFGRGLQSVNILRNTSEDS 193

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            RG  +FP +        RE   +             +A   L    K  E+++ +   +
Sbjct: 194 ERGVSFFPNNW------SREDMFA-------------YARRNLSLGKKYLEDVKSLPI-L 233

Query: 251 FPAFIPVSITESVLKHAQN 269
               IP+++ +  L     
Sbjct: 234 HFCKIPLALADGTLNALMK 252


>gi|256053127|ref|XP_002570057.1| hypothetical protein [Schistosoma mansoni]
 gi|227287419|emb|CAY17695.1| conserved hypothetical protein [Schistosoma mansoni]
          Length = 104

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKD 82
           + L  ++  DY+ YL  LL P   R     L  F+ EL ++ D + N      R Q+W++
Sbjct: 17  YCLSIVQKYDYENYLCSLLLPGSRRNFALALRAFNVELAQICDRSENLAQAKYRFQFWRE 76

Query: 83  IFESSTKGLIAESIS--PFSVEL 103
           I E         S    P   EL
Sbjct: 77  IIEYLFDSSNNSSPHHTPLGREL 99


>gi|169235590|ref|YP_001688790.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
           [Halobacterium salinarum R1]
 gi|167726656|emb|CAP13442.2| farnesyl-diphosphate farnesyltransferase (squalene synthase)
           [Halobacterium salinarum R1]
          Length = 347

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 77/306 (25%), Gaps = 40/306 (13%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
           R+  +  + D  +    ++D+     L            +   Y        V D    P
Sbjct: 4   RQSHQPTASDREWCHSAVQDVSRTFALTIDALEEPMATRICVGYLLCRVADTVEDATAMP 63

Query: 71  ITRDMRLQWWKDIF----------ESSTKGLIAESISP------------FSVELLSIVR 108
            T   +L    D            E            P                  S+  
Sbjct: 64  PTEQAQLLETYDAALDPDCGTTVAEFQAAVGDHVPSEPNADWRVVANTTRVVSAFESLDD 123

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDS-------IFDCKQFEHYAFRISSRLIHLATMI---- 157
                 +  +  +                  I    + E Y + ++  +  L T +    
Sbjct: 124 AAKAAIRPTVREMATGMASFVQRYADAGGLRIQSPTELEEYCWYVAGTVGELVTELLARD 183

Query: 158 LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQ 216
             S+  +A     +   +   +  +   +   Y     +Y P + L    L  E     +
Sbjct: 184 APSDAAAAMRENARSFALLLQLVNVAKDVRPDYEEENNVYLPQEWLDDHDLAPEDVADPE 243

Query: 217 NSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL-----KHAQNHG 271
           ++ R++  ++   +    Y+  A+  +  +        +       +L     +   N  
Sbjct: 244 HAGRVASVVERVTDRARGYVADAQRWLEVMP-TSQGNTLAAWAVPFLLAVGTMRELGNRP 302

Query: 272 FKIVSH 277
             +V  
Sbjct: 303 ADVVRE 308


>gi|302830378|ref|XP_002946755.1| hypothetical protein VOLCADRAFT_79344 [Volvox carteri f.
           nagariensis]
 gi|300267799|gb|EFJ51981.1| hypothetical protein VOLCADRAFT_79344 [Volvox carteri f.
           nagariensis]
          Length = 447

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/280 (11%), Positives = 77/280 (27%), Gaps = 21/280 (7%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
             D  F    L D+     +     P   R ++   Y     L  V D        +  +
Sbjct: 33  DPDLAFCYGILNDVSRSFAIVIQQLPNPLRDAICVFYLVLRGLDTVEDDMALEVSFKVPQ 92

Query: 77  LQWWKDIFESSTKGLIAESISP--FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN---- 130
           L+ + +        +            +  ++V  +         +I        +    
Sbjct: 93  LRSFHERIYDRGFTMACGYKHYKRLMAQFGTVVNVFLSLEPAHQKVIADITRRMGHGMAD 152

Query: 131 ---DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQL 182
                +   K ++ Y   ++  +    + +  +    +     +     + G+      +
Sbjct: 153 FIEKEVEAVKDYDLYCHYVAGLVGIGLSQLFAASGLESPSIGSEEDLANHMGLFLQKTNI 212

Query: 183 ICQLPIHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
           I             ++++P +I G  G   E F    N  +    +       L++L   
Sbjct: 213 IRDYLEDIMEEPAPRMFWPREIWGRYGPSLEHFKDPVNRKQAVQCLNHMVTDALRHLPYC 272

Query: 240 REEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSH 277
            + M+ +   +      IP  +    L     +  K+   
Sbjct: 273 LQYMKQLKHVLVFRFCAIPQIMAAGTL-ALCYNNGKVFEG 311


>gi|323490544|ref|ZP_08095750.1| squalene/phytoene synthase [Planococcus donghaensis MPA1U2]
 gi|323395810|gb|EGA88650.1| squalene/phytoene synthase [Planococcus donghaensis MPA1U2]
          Length = 276

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/279 (10%), Positives = 69/279 (24%), Gaps = 50/279 (17%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            N +KE  I           L++     ++      P  + ++   Y     +  + D  
Sbjct: 5   SNLQKESLIM----------LKETSRTFFIPISFLEPTLKKTVGSAYLCMRAIDEIEDHP 54

Query: 68  RNPITRDMRL-----QWWKDIFESSTKGLIAESIS----PFSVELLSIVRQYDLP----- 113
                  ++L        +  F+      +         P ++ L   +           
Sbjct: 55  ELDDQAKIKLLSTIQTMLETNFDEDAYLELVTPYQAFLPPVTMRLADWIHVCPEEIRGKV 114

Query: 114 NQYFLDMIEAHFFDSYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIK 171
            +    M          +  I   +  + Y + ++  +  + + I    +          
Sbjct: 115 IESTAIMAGGMSKWVEKNWVIQTKEDLDEYTYYVAGLVGTMLSDIWHWHDGTVTDPDHAI 174

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G       ++      + RG  + P                                 
Sbjct: 175 AFGRGLQAVNMLRNYDEDFERGVTFVPEGWTRE----------------------DMFNY 212

Query: 232 GLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQ 268
               L KA   ++ I     +    +P+++  S LK  +
Sbjct: 213 AKNNLAKADLYVKPIKNKRILMFCKVPLALAHSTLKALK 251


>gi|322700581|gb|EFY92335.1| hypothetical protein MAC_01606 [Metarhizium acridum CQMa 102]
          Length = 260

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 71/261 (27%), Gaps = 59/261 (22%)

Query: 94  ESISPFSVELLSIVR----QYDLP-----NQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
               P  + L   ++    +   P       +   +++                 E YA 
Sbjct: 2   PPREPICILLHQALQGLEARAGSPTKKSIKFWLSRLVKTREKHMDGRPYPSLAALEDYAE 61

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ---------- 194
              S +++  T+     R      +  + G A  I  ++  +P+    G+          
Sbjct: 62  NTYSTMMY-TTLASMPLRSMHIDHLASHIGKACGIIAVLRGVPVLAAPGRPVKTPTGADA 120

Query: 195 -------LYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
                  L  PLDI+   G+  E     G N+  +  A+   A     +L  ARE ++ +
Sbjct: 121 PPTREPSLLLPLDIMAEEGVKEEEVFRQGPNAPGLQDAVFKVATRANDHLITAREMLKRL 180

Query: 247 L-----------------------------PDVFPAFIPVSITESVLKHAQNHGFKIVSH 277
                                            F   +        L++ +   F   + 
Sbjct: 181 KAGEDPGHEFEHEGEAEHVYLGESDTAKEIRQSFGVLLEAVPAAHYLENLEKANFDAFA- 239

Query: 278 SHTPNQLVRPWYMLSSSIKKR 298
                    PW +  S   +R
Sbjct: 240 -VKSGGWRLPWRIWQSLSSER 259


>gi|317027904|ref|XP_001400229.2| squalene synthase [Aspergillus niger CBS 513.88]
          Length = 398

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/255 (8%), Positives = 61/255 (23%), Gaps = 26/255 (10%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
           S       + L               P   + +   Y     L  + D    +   +   
Sbjct: 39  SESRKVCFKFLDQTGRSFSAVIKELHPELLVPICIFYLVLRGLDTIEDDPSISVKAKAAL 98

Query: 77  LQWWKDIF----ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           L+ ++D+      +       E      V    ++ +Y         +I+       N  
Sbjct: 99  LRGFEDVLVKDGWTYDGNRPEEKDRELLVHFHHVINEYKALKPACRLIIKDITRVMGNGM 158

Query: 133 IF----------------DCKQFEHYAFRISSRLIHLATMILDSERYS-----ASLRVIK 171
                                +++ Y + ++  +    T      +          ++ +
Sbjct: 159 ADFCHKVTLNNPDKAGVMTIVEYDLYCYYVAGCVGEGLTRSFIEAQLCNSSLLDYPKLSR 218

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G       +I  +   +   + ++P  I      D       +N +            
Sbjct: 219 SMGAFLQKTNIIRDVSEDHGDHRCFWPKQIWSKYVSDFADLFKPENCEAALDCSSEMVLN 278

Query: 232 GLKYLFKAREEMRYI 246
            L++       +  +
Sbjct: 279 ALEHAKDCLVYLAGL 293


>gi|58040681|ref|YP_192645.1| hypothetical protein GOX2255 [Gluconobacter oxydans 621H]
 gi|58003095|gb|AAW61989.1| Hypothetical protein GOX2255 [Gluconobacter oxydans 621H]
          Length = 220

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 61/208 (29%), Gaps = 9/208 (4%)

Query: 92  IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
              + +  +V+L  ++ Q  +P +   D++EA   D+         +  HY    ++ + 
Sbjct: 12  PPRADAQTAVKLREVLLQTGVPLETATDLLEAFCMDAEKTRYESWDELLHYCKYSANPVG 71

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRE 210
               ++        +L        A  +   +  +        + Y PL  L   G+  +
Sbjct: 72  RFLLLLH--GEAEETLAPSDALCSALQVVNHLQDVADDLKVLDRCYVPLPWLEEEGVCLD 129

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITE--SVL-KHA 267
                ++   +        +        AR  + +++ D         I E   +L    
Sbjct: 130 DLRLVRSKPGVRRVFDRMLDGVDVLNRNARI-LPHLIRDRRMRLEAAVIVELCHILTARL 188

Query: 268 QNHGFKIVSHSHTPNQLVRPWYMLSSSI 295
           +      +       +      +  +  
Sbjct: 189 RRQ--DPLLERVALTKTDGAKALFRALR 214


>gi|46135731|ref|XP_389557.1| hypothetical protein FG09381.1 [Gibberella zeae PH-1]
          Length = 462

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/297 (9%), Positives = 77/297 (25%), Gaps = 24/297 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++    S +     R L                   + ++  Y     L  + D    
Sbjct: 27  HERDPSTESPELQECFRYLNLTSRSFAAVIQELNHELLVPITLFYLCLRGLDTIEDDMTL 86

Query: 70  PITRDM-RLQWWKDIF--ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           P+ + +  L+ +      +        E           ++ +       + ++I     
Sbjct: 87  PLEKKIPILRNFHTTMNEDGWQFHESQEKDKELLEHFDVVITELKKIKAPYHEIITDMTR 146

Query: 127 DSY-------------NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-- 171
                            + +   +++E Y   ++  +    T +      +      +  
Sbjct: 147 KMGNGMADYAENEEMIKNGVQTIEEYELYCHYVAGLVGEGLTRLFVESELANPKLAERPS 206

Query: 172 ---YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                G       +I  L   +  G+ ++P +I        E   +     +    +   
Sbjct: 207 LTESMGQFLQKTNIIRDLHEDWQDGRRWYPKEIWSQHVDKWEDMFNPAQQTKAIECVSHM 266

Query: 229 AELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               LK+  +    M  I          IP  +  + L+    +  +++  +    +
Sbjct: 267 VLDALKHSEECLFYMAGIKDQSVFNFVAIPEGMAIATLELVFRNP-EVLKRNVKITK 322


>gi|323143189|ref|ZP_08077885.1| phytoene/squalene synthetase [Succinatimonas hippei YIT 12066]
 gi|322417030|gb|EFY07668.1| phytoene/squalene synthetase [Succinatimonas hippei YIT 12066]
          Length = 341

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/322 (9%), Positives = 82/322 (25%), Gaps = 53/322 (16%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR- 73
           +I +        +L+ +     L   L PP  R  +   Y        + D  +    + 
Sbjct: 3   EIQAMSLEKQQDHLQKVSRTFALTIPLLPPDLRDYVGNAYLLCRIADTLEDDPKADAVQK 62

Query: 74  -----------------DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQY-DLPNQ 115
                            +  L   +D      K    E+      +++ ++ +    P  
Sbjct: 63  IVWLKDFAFLAFNGFQNEALLISLRDKALLLVKDGAKEAEYALLEDMIEVINRTLSFPRM 122

Query: 116 YFLD-------MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
                      +            I      + Y + ++  +  L   +  +    +S  
Sbjct: 123 QIDILSRGVGVLASGMADKIAETKINSEDDVDDYCYMVAGVVGELLASLFFNITVKSSSP 182

Query: 169 VIK------YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRIS 222
            +         G    +  ++        R   + P                    D+  
Sbjct: 183 RMDVMAKAVSFGEGLQLTNILKDRYEDSTRNVSFLPRV----------------AEDKRK 226

Query: 223 LAIKIFAELGLKYLFKAREEMRYILPDVFPAFIP----VSITESVLKHAQNHGF-KIVSH 277
             I  + +  + +L  A + +  +        +     V++    LK    + F K    
Sbjct: 227 DEIDFYIKKTMGHLDDALDFVLSVPAKEKGIRLFCYFNVAMAIMTLKKIAKNPFGKSSDL 286

Query: 278 SHTPNQLVRPWYMLSSSIKKRF 299
             + + + R   +   ++   F
Sbjct: 287 KISRSDVKRLAALCRFAVGSDF 308


>gi|302422388|ref|XP_003009024.1| phytoene synthase [Verticillium albo-atrum VaMs.102]
 gi|261352170|gb|EEY14598.1| phytoene synthase [Verticillium albo-atrum VaMs.102]
          Length = 645

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 55/206 (26%), Gaps = 43/206 (20%)

Query: 106 IVRQYDLPNQYFLDMIEAHFFDSYNDS------IFDCKQFEHYAFRISSRLIHLATMILD 159
            +  + +P + F D+++    D   D       I      E YA  ++S +  +   ++ 
Sbjct: 6   QLPVHLIPKRPFDDLLQGFVMDMDFDQGAGQFPITSVADLELYASYVASTVGLMCLELVF 65

Query: 160 SERYSASLRV------------------------------------IKYAGIAQFIGQLI 183
                                                             G+A     + 
Sbjct: 66  HHCIPGFPTHLYDTDATAETDATKLGAVLQRHSTKGPTTRNQLRRAACRMGLALQYVNIA 125

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             + +    G++Y P   L   GL  +  L    SD +    K   +L      ++R  M
Sbjct: 126 RDIAVDARIGRVYLPTTWLKEAGLTHQDVLRSPRSDGVMQVRKRLLDLAFNLYDESRVVM 185

Query: 244 RYILPDVFPAFIPVS-ITESVLKHAQ 268
             I P      I        + +  +
Sbjct: 186 VEIPPAARAPMIVAVESYMEIGRVLR 211


>gi|295822115|gb|ADG36711.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 412

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 76/293 (25%), Gaps = 21/293 (7%)

Query: 10  TRKEEKIFSRD--SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
            R  EK    +    F    L  +     L      P  R ++   Y     L  V D  
Sbjct: 24  ARHAEKQIPEEPHWAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDT 83

Query: 68  R--NPITRDMRLQWWKDIFESSTKGLIAESISPFSV--------ELLSIVRQYDLPNQYF 117
                +   + + + + I++               +          L + + Y    +  
Sbjct: 84  SIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHDSTAFLELEKNYQAAIENI 143

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A       + +     ++ Y   ++  +    + +  +      A   +    G+
Sbjct: 144 TKRMGAGMAKFICNEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGL 203

Query: 176 AQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +I       +   + ++++P  I        E     +NS +    +       
Sbjct: 204 FLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDL-KYENSVKAVQCLNDMVTNA 262

Query: 233 LKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L +     + M  +          IP  +    L     +  ++        +
Sbjct: 263 LLHAEDCLKYMSALRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFGGVVKMRR 314


>gi|134057162|emb|CAK48765.1| unnamed protein product [Aspergillus niger]
          Length = 390

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/255 (8%), Positives = 61/255 (23%), Gaps = 26/255 (10%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMR 76
           S       + L               P   + +   Y     L  + D    +   +   
Sbjct: 39  SESRKVCFKFLDQTGRSFSAVIKELHPELLVPICIFYLVLRGLDTIEDDPSISVKAKAAL 98

Query: 77  LQWWKDIF----ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           L+ ++D+      +       E      V    ++ +Y         +I+       N  
Sbjct: 99  LRGFEDVLVKDGWTYDGNRPEEKDRELLVHFHHVINEYKALKPACRLIIKDITRVMGNGM 158

Query: 133 IF----------------DCKQFEHYAFRISSRLIHLATMILDSERYS-----ASLRVIK 171
                                +++ Y + ++  +    T      +          ++ +
Sbjct: 159 ADFCHKVTLNNPDKAGVMTIVEYDLYCYYVAGCVGEGLTRSFIEAQLCNSSLLDYPKLSR 218

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G       +I  +   +   + ++P  I      D       +N +            
Sbjct: 219 SMGAFLQKTNIIRDVSEDHGDHRCFWPKQIWSKYVSDFADLFKPENCEAALDCSSEMVLN 278

Query: 232 GLKYLFKAREEMRYI 246
            L++       +  +
Sbjct: 279 ALEHAKDCLVYLAGL 293


>gi|295822105|gb|ADG36706.1| squalene synthase 1 [Glycyrrhiza uralensis]
          Length = 412

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/280 (9%), Positives = 72/280 (25%), Gaps = 19/280 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR--NPITRDMRLQ 78
             F    L  +     L      P  R ++   Y     L  V D       +   + + 
Sbjct: 37  WAFCYTMLLKVSRSFALVIQQLDPQLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIA 96

Query: 79  WWKDIFESSTKGLIAESISPFSV--------ELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
           + + I++               +          L + + Y    +     + A       
Sbjct: 97  FHRHIYDRDWHFSCGTKEYKVLMDQFHHDSTAFLELEKNYQAAIENITKRMGAGMAKFIC 156

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPI 188
           + +     ++ Y   ++  +    + +  +      A   +    G+      +I     
Sbjct: 157 NEVETVDDYDEYCHYVAGLVGLGLSKLFHASGKEDLAPDHLSNSMGLFLQKTNIIRDYLE 216

Query: 189 HYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
             +   + ++++P  I        E     +NS +    +       L +     + M  
Sbjct: 217 DINEIPKSRMFWPRQIWSKYVNKLEDL-KYENSVKAVQCLNDMVTNALLHAEDCLKYMSA 275

Query: 246 ILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +          IP  +    L     +  ++        +
Sbjct: 276 LRDMSIFRFCAIPQIMAIGTL-ALCYNNIEVFGGVVKMRR 314


>gi|331212887|ref|XP_003307713.1| squalene synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298116|gb|EFP74707.1| squalene synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 496

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/306 (8%), Positives = 71/306 (23%), Gaps = 28/306 (9%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITR 73
           +I   +       L                     +   Y     L  V D    P   +
Sbjct: 40  RINEPNMKACWLFLDQTSRSFSAVIKELDGELSRVVCIFYLVLRGLDTVEDDMSIPIELK 99

Query: 74  DMRLQWWKDIFESSTK----GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
           +  L+ +    +            E      VE   ++ ++ +    +  ++        
Sbjct: 100 ETLLKSFYQKLDQPGWNFDGCSPTEKDRNLLVEFDKVISEFQVLEPKYRTIVTDVTARMG 159

Query: 130 NDS---------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK--- 171
           +                 I     F+ Y   ++  +    + +             +   
Sbjct: 160 SGMARFARTAVDGGGIFSIDTMAGFDGYCHYVAGLVGEGLSRLFSESGKENEELGYQLRL 219

Query: 172 --YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
               G+      ++         G++++P  I      +       Q   +   A+    
Sbjct: 220 SNSMGLLLQKTNILRDFREDVDAGRMFWPEAIWRKFVDEPRLLTLPQFQKQARWALTEMT 279

Query: 230 ELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
              L +   A E M  +          IP  +  + L         +   +    + +  
Sbjct: 280 IDALSHAVDALEYMTLLKNQSIFNFCAIPQVMAIATL-ELCFENLDVFQKNVKIRRSLMA 338

Query: 288 WYMLSS 293
             +  +
Sbjct: 339 LLISKA 344


>gi|295429141|ref|ZP_06821763.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|295126900|gb|EFG56544.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           EMRSA16]
          Length = 103

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 10/95 (10%), Positives = 29/95 (30%)

Query: 11  RKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP 70
           R    +   +  +  + ++        A  L P   R ++  +Y    ++    D   + 
Sbjct: 7   RTSMTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDI 66

Query: 71  ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLS 105
              +   +  + I +   +    +S     + L  
Sbjct: 67  QFLNQIKEDIQSIEKYPYEYHHFQSDRRIMMALQH 101


>gi|224048923|ref|XP_002186800.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 [Taeniopygia
           guttata]
          Length = 418

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/293 (9%), Positives = 72/293 (24%), Gaps = 18/293 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            R +            R L                  R ++   Y     L  V D    
Sbjct: 30  PRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSI 89

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
           P+   + +            WK          + E     S+E  ++ + Y         
Sbjct: 90  PLDVKVPMLHEFHSYLYQPDWKYTESKEKDRQVLEDFPTISMEFRNLSKVYQDVISDICH 149

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +     +   ++++ Y   ++  +    + +  +     S+           G
Sbjct: 150 KMGVGMAEFLEKKVDSEREWDKYCHYVAGLVGIGLSRLFSASELEDSIVGQDTDLANSMG 209

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
           +      +I         G+ ++P ++          F   +N D     +       L 
Sbjct: 210 LFLQKTNIIRDYLEDQLEGREFWPREVWSRYAKKLSDFAKPENIDMAVQCLNELITNALH 269

Query: 235 YLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
           ++      +  +          IP  +  + L     +  ++        +  
Sbjct: 270 HVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLTA-CYNNQQVFRGVVKIRKGQ 321


>gi|159490972|ref|XP_001703447.1| farnesyl-diphosphate farnesyltransferase [Chlamydomonas
           reinhardtii]
 gi|158280371|gb|EDP06129.1| farnesyl-diphosphate farnesyltransferase [Chlamydomonas
           reinhardtii]
          Length = 378

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 77/305 (25%), Gaps = 27/305 (8%)

Query: 2   VLKFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
           +L+      R  +     D  F    L D+     +     P   R S+   Y     L 
Sbjct: 17  LLRMYRAAKRATKLPKDPDLAFCYGMLNDVSRSFAIVIQQLPNPLRDSICVFYLVLRGLD 76

Query: 62  RVRDTAR-NPITRDMRLQWWKDIFESSTKGLIAESIS------------PFSVELLSIVR 108
            V D    +   +   L+ + +        +                     + L    +
Sbjct: 77  TVEDDMALDVDFKLPELRRFHERIYDRGFTMECGYNHYKRLMAQFGVVVNVFLALPPPHQ 136

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
                    +        +     +     ++ Y   ++  +    + +  +    A+  
Sbjct: 137 AVIADITRRMGY---GMAEFIEKEVVTVADYDKYCHYVAGLVGIGLSQLFAASGLEANSI 193

Query: 169 VIK-----YAGIAQFIGQLICQLPIHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDR 220
             +     + G+      +I             ++++P DI G        F    N   
Sbjct: 194 GTEEDLANHMGLFLQKTNIIRDYLEDILEEPAPRMFWPRDIWGKYAPALADFKEPANRGA 253

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHS 278
               +       L++L      M  +   +      IP  +    L    N+G ++    
Sbjct: 254 AVRCLNDMITDALRHLPYCLAYMEQLRHVMVFRFCAIPQIMAAGTLAACYNNG-RVFEGV 312

Query: 279 HTPNQ 283
               +
Sbjct: 313 VKMRR 317


>gi|296412430|ref|XP_002835927.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629724|emb|CAZ80084.1| unnamed protein product [Tuber melanosporum]
          Length = 472

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 81/302 (26%), Gaps = 28/302 (9%)

Query: 9   NTRKEEKIFSRDSLF--VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT 66
           N   + KI +           L               P   +S++  Y     L  + D 
Sbjct: 27  NPLHQRKIENESLTLRRCFEFLDLTSRSFSAVIQELCPELCVSVTLFYLILRGLDTIEDD 86

Query: 67  ARNP-ITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMI 121
              P   ++  L+ +  + +            E      VE  +++ ++ L ++    +I
Sbjct: 87  MTIPLEIKEPLLRSFDKVLDKEGWTFDGNGPKEKDKQLLVEFSNVITEFALLSESHRAII 146

Query: 122 EAHFFDSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSASLR 168
           +       N                     ++ Y   ++  +    T +      +    
Sbjct: 147 KDITKKMGNGMADYANNAEHNVNGVNTIADYDLYCHYVAGLVGDGLTRLFVDTGKANPAL 206

Query: 169 VIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL 223
           + +       G+      +I          + ++P +I        E     +N +    
Sbjct: 207 LERPHLINSMGLFLQKTNIIRDYREDLDDKRRFWPKEIWTKHIEKYEELHLPENEEAALN 266

Query: 224 AIKIFAELGLKYLFKAREEMRYILPDVFPAF--IPVSITESVLKHAQNHGFKIVSHSHTP 281
            I       L+++ +    +  I       F  IP  +  + L     +   +   +   
Sbjct: 267 CISEMCLNSLQHVDECLFYLAGIKDQSVFNFTAIPQVMAIATLALVFRNK-DVFHKNVKI 325

Query: 282 NQ 283
            +
Sbjct: 326 PK 327


>gi|223997364|ref|XP_002288355.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975463|gb|EED93791.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 442

 Score = 74.0 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/294 (9%), Positives = 73/294 (24%), Gaps = 31/294 (10%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT---ARNPITRDMR 76
           D  F    L  +           PP   + +   Y     L  + D      +   +   
Sbjct: 97  DLAFCDEILCKVSRSFAAVIRQLPPTLLMDVLIFYLVLRALDTIEDDMTFFDSNEDKVKI 156

Query: 77  LQWWKDI--FESSTKGLIAESISP--FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
           LQ +      + + K +            E       Y    +    +I           
Sbjct: 157 LQSFHKTALVDPNWKMMGCGEGDERRLLEEFPKCHSVYAALPEGSRRVISDITQRMATGM 216

Query: 133 IF-----------DCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIA 176
                        D +Q+  Y   ++  +    + +      +    +  L +    G+ 
Sbjct: 217 AEFVDKDLGQGTVDVQQYNRYCHFVAGLVGEGLSRLFSVSGLEQPSLATELHLSDQMGLF 276

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE-SFLSGQNSDRISLAI----KIFAEL 231
                +I      Y  G+ ++P  +        +  + +   ++  + A           
Sbjct: 277 LQKTNIIRDYLEDYVDGRAFWPQSVWKKYSSSGDLGYFANPTTEEATNAGLYCLNELVTD 336

Query: 232 GLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            L+ +      +  +          IP  +  + L+    +   + +      +
Sbjct: 337 ALELVPDCLTYLSKLRCAEVFRFCAIPQVMAIATLEK-CFNNGDVFTGVVKIRK 389


>gi|110668279|ref|YP_658090.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
           [Haloquadratum walsbyi DSM 16790]
 gi|109626026|emb|CAJ52474.1| farnesyl-diphosphate farnesyltransferase (squalene synthase)
           [Haloquadratum walsbyi DSM 16790]
          Length = 357

 Score = 74.0 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 82/302 (27%), Gaps = 44/302 (14%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             D  +  R+++ +     L   +        +   Y        + D +         L
Sbjct: 12  QADLRWCHRSVQGVSRTFALTVDVLDEPMSSYICLGYLVCRIADTIEDASHISSETQAEL 71

Query: 78  QWWKD-------IFESSTKGLIAESISP---------FSVELLSIVRQYDLPNQYFLDMI 121
               D         +++T     E   P                ++R +          I
Sbjct: 72  LETYDAALDPENEIDAATFASAVEPHLPTGELDDDWTVVRNAPRVLRTFGGLPDEVQRAI 131

Query: 122 EAHFFDSYNDS--------------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASL 167
                +                   I   ++ E Y +  +  + +L T +L     ++  
Sbjct: 132 IPPARELVQGMTTFVDRYSDTGGLRIQTREELEEYCYYAAGTVGNLITNLLTRGSVASER 191

Query: 168 RVI-----KYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
           R       +  G+   +  +   +   Y     +Y P + L    + ++  ++ ++    
Sbjct: 192 RQQLYETAEEFGLLLQLVNVSKDVYDDYTDEDNIYLPAEWLADEDVPQDQLVNPEHEAGA 251

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILPD------VFPAFIPVSITESVLKHAQNHGFKIV 275
           +  ++  A L   +L  A   +  I          +   IP  +    L+   +     +
Sbjct: 252 ATVVRRTASLAGSFLDDAETYLETIPLRDGNTLEAWA--IPFLLAVGTLRELLSRPEDAL 309

Query: 276 SH 277
           S 
Sbjct: 310 SE 311


>gi|281206584|gb|EFA80770.1| farnesyl-diphosphate farnesyltransferase [Polysphondylium pallidum
           PN500]
          Length = 428

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/323 (9%), Positives = 88/323 (27%), Gaps = 35/323 (10%)

Query: 2   VLKFLTKNTRKEEKIFSRDSL---FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHT 58
           +LK       K + +   D     +    L               P  + ++   Y    
Sbjct: 16  LLKIGYTEKFKPKNVIKEDLENKQWCYELLNKTSRSFAFVINELDPHLKDAICVFYLVLR 75

Query: 59  ELMRVRDTAR-NPITRDMRLQWWKDIF-----------ESSTKGLIAESISPFSVELLSI 106
            L  V D    +  T+   L  + +              ++ + ++ E+        LS+
Sbjct: 76  GLDTVEDDTTVSLETKLPVLTKFAEGLYQPGFKVFGYGMNNDEKMLVENFDKVVDVYLSL 135

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
             ++          +     +     +    +++ Y   ++  +    + I  +    + 
Sbjct: 136 GDRFCPIIHDITKRMAHGMSEFLQKEVVTLPEWDLYCHYVAGLVGIGLSKIFAASGLESE 195

Query: 167 LRVI-----KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
                       G+      +I       +  ++++P +I        ++F + Q++  +
Sbjct: 196 WFANADKESNDMGLFLQKTNIIRDYLEDINESRIFWPREIWSKYTAKLDNFKNIQHAQSV 255

Query: 222 S------------LAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHA 267
           S              +       L +   + + M  +     +    IP  +    L   
Sbjct: 256 SLMLIVTMIVIALNCLNDLITNALSHAIVSLDYMSRLRNPKVIGFCAIPQVMAIGTLSA- 314

Query: 268 QNHGFKIVSHSHTPNQLVRPWYM 290
             +   + +      +  R   +
Sbjct: 315 CYNNHGVFTGVVKIRKGQRALIV 337


>gi|224001312|ref|XP_002290328.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973750|gb|EED92080.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1194

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/389 (13%), Positives = 94/389 (24%), Gaps = 98/389 (25%)

Query: 4    KFLTKNTRKEEKI-FSRDSLFVLRNLRDIDYDRYLACLLSP-PLYRISLSFLYYFHTEL- 60
            KF+T++      I    D    +  +R  D   YL  +L      R     L  F  E  
Sbjct: 801  KFITRSLPSPASIDLHNDLSHAISIVRKYDPSGYLPGMLLSTSEARAGYFGLRAFWVETG 860

Query: 61   ----------MRVRDTAR---NPITRDMRLQWWKDIFESST--------KGLIAESI--- 96
                        +  +     +  T + RL +WK+  +S          +  I +     
Sbjct: 861  LRFGLGTNITNGIIGSNNAKYDLGTANGRLHFWKEGLDSVFSSLEDTNQQSHINDRDQGS 920

Query: 97   -----SPFSVE-----------LLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFE 140
                  P               L   +       +    ++ A   D         +   
Sbjct: 921  LLWIKHPTLRLVRYLYSTPSSLLDDTILHTQQSRESLHTILNARIQDLELRQYPTVESLV 980

Query: 141  HYAFRISSRLIHLATMI-----------LDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
                   S L  L                 SE   A+ R   + G+   I   +    + 
Sbjct: 981  SRCHDSCSGLNSLVLECAGLPPSIESSNEASEMSLATHRAGLHFGVTHGISNALRMAIVI 1040

Query: 190  YHR----------------------GQLYFPLDILGAVGLDRES-----FLSGQNS--DR 220
                                     G++  P D+     L R          G      +
Sbjct: 1041 ASTTTTTTSTSAVGAEGSYNTTNTAGRIVLPQDLCEKYSLLRPRYVLSVLAMGDEDCKAK 1100

Query: 221  ISLAIKIFAELGLKYLFKARE-----------EMRYILPDVFPAFIPVSITESVLKHAQN 269
            + L +K   ++    L    E             +        AF+PV    + L   + 
Sbjct: 1101 LKLVVKDMVDIARDELRLGEEEMNAAQDVLNSGQQMQYKRAREAFLPVLAATTFLNRLEE 1160

Query: 270  HGFKIVSHSHT-PNQLVRP---WYMLSSS 294
              + +        ++  +    W +L   
Sbjct: 1161 RDYDLTDRGLRNVSRGEQMVCSWNLLRKW 1189


>gi|315041815|ref|XP_003170284.1| squalene synthetase [Arthroderma gypseum CBS 118893]
 gi|311345318|gb|EFR04521.1| squalene synthetase [Arthroderma gypseum CBS 118893]
          Length = 471

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/266 (10%), Positives = 76/266 (28%), Gaps = 31/266 (11%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + L+K T  E+K            L+          +   P   + +   Y     L  V
Sbjct: 32  RDLSKETETEKK--------CYHFLKLTSRSFSAVIMELHPELLMPVCLFYLILRGLDTV 83

Query: 64  RDTARNP-ITRDMRLQWWKDIFESSTKGLIAES----ISPFSVELLSIVRQYDLPNQYFL 118
            D    P  T++  L+ +KDI E                   V+  +++ ++      + 
Sbjct: 84  EDDTSIPLETKEPILRGFKDILEEDGWTFTGNRPEEKDRELLVQFHNVITEFKKIKPAYK 143

Query: 119 DMIEAHFFDS-------------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA 165
            +I+                    ++ +   + ++ Y + ++  +    T +     ++ 
Sbjct: 144 VIIKDITDKMGNGMADYIRRGEEDDEIVKTVEDYDLYCYYVAGLVGEGLTRLFVEAGFAR 203

Query: 166 SLRVIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDR 220
              + +       G       +I  +   +   + ++P +I      +       +   +
Sbjct: 204 PELLERPDLFISMGRFLQKTNIIRDVREDHDDKRRFWPREIWSRHVKEFSDLFKPEFRQQ 263

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYI 246
                       L ++      +  +
Sbjct: 264 ALNCNSDMILNALSHVEDCIYYLSAL 289


>gi|193072755|gb|ACF07859.1| phytoene synthase [Oryza sativa Indica Group]
          Length = 84

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 20/78 (25%)

Query: 17 FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
            +          +     YL  +L     R ++  +Y +      + D           
Sbjct: 3  LKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDELVDGPNASHITPSA 62

Query: 77 LQWWKDIFESSTKGLIAE 94
          L  W+   +    G   +
Sbjct: 63 LDRWEKRLDDLFTGRPYD 80


>gi|296537206|ref|ZP_06899123.1| squalene/phytoene synthase [Roseomonas cervicalis ATCC 49957]
 gi|296262467|gb|EFH09175.1| squalene/phytoene synthase [Roseomonas cervicalis ATCC 49957]
          Length = 230

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 14/214 (6%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIA 93
           +  +A LL     R  +   Y+F      + D    P    +      +           
Sbjct: 20  NFPVASLLIARPLRRRILSFYHFVRLADDIADHPELPPAVRLARLAALEAALDDPAT--- 76

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
               P +  L    +Q          M+ A   D+    + D    E Y  R +  +  L
Sbjct: 77  --AQPEARAL----QQAGDGLAEARTMLSAFRQDAELSRLPDWASLEDYCRRSAVPVGRL 130

Query: 154 ATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESF 212
              +       A         IA  I   +  +     R  +LY P D L A G +    
Sbjct: 131 LLRLHGEVDAEAQA-SADALCIALQILNHLQDMGEDLRRLDRLYVPQDWLAAAGGETRFL 189

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
              +     +  ++   +     L +A    R +
Sbjct: 190 ADPEAR---APVLETALDRVEALLDRAAWLPRRV 220


>gi|320581185|gb|EFW95406.1| Farnesyl-diphosphate farnesyl transferase (squalene synthase)
           [Pichia angusta DL-1]
          Length = 385

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/267 (10%), Positives = 70/267 (26%), Gaps = 26/267 (9%)

Query: 42  SPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESSTKGL----IAESI 96
             P  R  +   Y     L  + D    +P  +   L+ +                 E  
Sbjct: 3   LNPELRNVVMLFYLVLRALDTIEDDMTLDPELKIPMLRTFDSKLNLKDWTFHGSGPNEKD 62

Query: 97  SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS-------------YNDSIFDCKQFEHYA 143
               V   SI+ +Y      + D+I+                     + +   K ++ Y 
Sbjct: 63  RIVLVNFDSILTEYHKLQPKYQDIIKDVTRKMGNGMADYVVNEEFNFNGVATVKDYDLYC 122

Query: 144 FRISSRLIHLATMI-----LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
             ++  +    T +           +  + +    G+      +I         G+ ++P
Sbjct: 123 HYVAGLVGEGLTRMIAAADFGHPDLADKMYLSDSMGLFLQKTNIIRDFREDLDDGRSFWP 182

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF--IP 256
            +I         +F   ++               L ++      +  +       F  IP
Sbjct: 183 KEIWAKHTDKLANFAQPEHLQEALNCSSELVLNVLDHVKDVLVYLSMVYDHSTYCFCAIP 242

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQ 283
             +  + L     + + +   +    +
Sbjct: 243 QVMAIATLALVFQNPY-VFQKNVKIRK 268


>gi|116200642|ref|XP_001226133.1| hypothetical protein CHGG_10866 [Chaetomium globosum CBS 148.51]
 gi|88175580|gb|EAQ83048.1| hypothetical protein CHGG_10866 [Chaetomium globosum CBS 148.51]
          Length = 469

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/299 (9%), Positives = 86/299 (28%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR- 68
            R+  +  +       + L               P   + +   Y     L  + D    
Sbjct: 31  HRRNTEDETETEAACFQYLDLTSRSFSAVIKELNPELLMPICLFYLVLRGLDTIEDDMTI 90

Query: 69  NPITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIE-- 122
           +   ++  L+ +    E            E      V   S++ +     + + ++I+  
Sbjct: 91  DIKEKEPLLRNFSVHMEQDGWTFDKNGPNEKDRELLVHFDSVIVELKKVKKPYYEIIKDI 150

Query: 123 -----------AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                      A   +   + +   +++E Y   ++  +    T +  +   +    +++
Sbjct: 151 TIKMGNGMADYAINAEHNVNGVNTIEEYELYCHYVAGLVGEGLTRLFVASELANPQLLVR 210

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G       +I  +   +   + ++P +I      + +   + +N ++      
Sbjct: 211 TDLTESMGQMLQKVNIIRDVHEDWVDKRRFWPKEIWSQYVTNWDDLFALENREKALQCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 LK+  +    M  I          IP S+  + L+    +   +   +    +
Sbjct: 271 HMVLNALKHADECLFYMAGIRDQSVFNFVAIPQSMAMATLELVFRNPA-VFERNIKITK 328


>gi|115471061|ref|NP_001059129.1| Os07g0200700 [Oryza sativa Japonica Group]
 gi|34394799|dbj|BAC84212.1| putative squalene synthase [Oryza sativa Japonica Group]
 gi|113610665|dbj|BAF21043.1| Os07g0200700 [Oryza sativa Japonica Group]
 gi|215693272|dbj|BAG88654.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222636626|gb|EEE66758.1| hypothetical protein OsJ_23470 [Oryza sativa Japonica Group]
          Length = 410

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/297 (9%), Positives = 74/297 (24%), Gaps = 29/297 (9%)

Query: 11  RKEEKIFSRD---SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           R+E    + D     F    L  +     +      P  R ++   Y     L  V D  
Sbjct: 26  RREVAAATDDDEHWAFAYSMLHRVSRSFAIVIQQLGPDLRNAVCVFYLVLRALDTVEDDT 85

Query: 68  RNP-ITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYF 117
             P   +   LQ +     +                +         L +   Y    +  
Sbjct: 86  SIPTEIKVPILQEFHRHIYNRDWHFSCGTKDCKILMDKFHYVLTAFLELGSGYQEAIEEI 145

Query: 118 LDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGI 175
              + A         +     ++ Y   ++  +    + +  +      A   +    G+
Sbjct: 146 TRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSRLFHAAGLEDLAPESLSNSMGL 205

Query: 176 AQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
                 +        +   + ++++P +I        E      NS +    +      G
Sbjct: 206 FLQKVNITRDYLEDINEIPKSRMFWPREIWSKYVDKLEDLKYENNSVKAVKCLNEMVTNG 265

Query: 233 LKY------LFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           L +         A +++  +     P  + ++           +   +        +
Sbjct: 266 LIHTEDCLRYMSALKDITILRFCAIPQVMALATY-----ALCYNNVNVFRGVVKLRR 317


>gi|149926128|ref|ZP_01914390.1| Squalene/phytoene synthase [Limnobacter sp. MED105]
 gi|149824946|gb|EDM84158.1| Squalene/phytoene synthase [Limnobacter sp. MED105]
          Length = 281

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/286 (9%), Positives = 79/286 (27%), Gaps = 15/286 (5%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
                 +    +       + A L      +      +  + EL +            ++
Sbjct: 5   LENPLAYCREKVSGETASLHYATLFQTEELKAFWLGCFTLNHELRQACLKQLEAGLTQVK 64

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDC 136
           L WW++    +          P    +   V    +P +++ ++I               
Sbjct: 65  LGWWQNALAGAASNSNP---HPVVTAISKPVIA-KIPPEHWGELINRVASGCEPKRYNSM 120

Query: 137 KQFEH-YAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
             + +         +  +          +   +++++   A  + QL+        +G  
Sbjct: 121 ADWHNDVLLETKPWIGLV--QARFISSTADYTQLLEFWATATRLCQLLRLAKY-LDQGFQ 177

Query: 196 YFPLDILGAVGLDRESFLSGQNSDR----ISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
             P+++L   G+  E     +++       S       E          E+ R     + 
Sbjct: 178 PLPVELLAKHGVTAEQIKRREHNGASARMFSEVGAHLLEKANIAWKNTPEDQRLFARPLR 237

Query: 252 PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
             F       S LK  +  G+ +++         +     ++ + +
Sbjct: 238 ALFRMRV---SELKVHEAAGYHLLTEQKIITPFKKFSTAWTTQVLR 280


>gi|224760803|gb|ACN62391.1| phytoene synthase [Dunaliella bardawil]
          Length = 101

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 9/84 (10%), Positives = 28/84 (33%), Gaps = 1/84 (1%)

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGF 272
            G+  +R    +K   +    Y  +A   +  + P    P +  + +   +L   + + +
Sbjct: 16  QGKVDERWRSFMKFQIKRARDYFKEAEYGVDCMDPRARWPVWSALILYRQILDAIEKNDY 75

Query: 273 KIVSHSHTPNQLVRPWYMLSSSIK 296
              S      +  +   +  +  +
Sbjct: 76  DNFSMRAYVPKAQKLTLLPMALFR 99


>gi|238506567|ref|XP_002384485.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
           flavus NRRL3357]
 gi|220689198|gb|EED45549.1| farnesyl-diphosphate farnesyltransferase, putative [Aspergillus
           flavus NRRL3357]
          Length = 378

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/249 (8%), Positives = 67/249 (26%), Gaps = 23/249 (9%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             +     +       + L               P   + +   Y     L  + D    
Sbjct: 30  HERNVNNETETQKACFKFLDLTSRSFSAVIKELHPELLLPVCVFYLVLRGLDTIEDDTSI 89

Query: 70  P-ITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMI--- 121
           P  T++  L+ +KD  E            E      V+  +++ ++      + +++   
Sbjct: 90  PLKTKEPMLREFKDYLEQDGWTFDGNRPEEKDRELLVQFHNVITEFKNMKPAYREIVKDI 149

Query: 122 -----EAHFFDSYNDSIF-----DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                                    ++++ Y + ++  +    T +     +     + +
Sbjct: 150 TDKMGNGMADYCRKAEFEDASVKTIEEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLSR 209

Query: 172 -----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +   +   + ++P +I      + E     +N +       
Sbjct: 210 PRLHKSMGLFLQKTNIIRDVREDHDDDRHFWPKEIWSKYVTEFEDLFKPENRETALNCGS 269

Query: 227 IFAELGLKY 235
                 L++
Sbjct: 270 EMVLNALEH 278


>gi|118766912|gb|ABL11382.1| CrtB [Mycobacterium marinum]
          Length = 151

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               +P    +    R+Y +    F D +E+   D       D      Y    +  +  
Sbjct: 30  GHPDNPVLAAVSHTARRYGIGADLFEDFLESMRMDLSITDYPDRDALNTYMRGSAEAIGL 89

Query: 153 LATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
               IL +   +          G A  +   I  +     R ++Y P D L A G+DR+ 
Sbjct: 90  QLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLARNRIYLPADELAAYGVDRDV 149

Query: 212 FL 213
            +
Sbjct: 150 LM 151


>gi|134102785|ref|YP_001108446.1| putative phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915408|emb|CAM05521.1| putative phytoene synthase [Saccharopolyspora erythraea NRRL 2338]
          Length = 213

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 7/163 (4%)

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMI--LDSERYSASLRVIKYAGIAQF 178
           ++    D              Y   +          +                +A     
Sbjct: 1   MDTIATDLRVTHYPTYTDLRRYVDAVCGHNGLWVNALLSHPPHGTEHCAVHAIHASAGLQ 60

Query: 179 IGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL----SGQNSDRISLAIKIFAELGLK 234
           +   +  L      G+ Y PL+ L A G+  +       SG+ ++ +   ++  AE    
Sbjct: 61  LTDYLRDLREDIEDGRCYLPLEDLDAFGISTDDLAEAARSGRMTEPLRELVRFEAERARL 120

Query: 235 YLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVS 276
           +  +A +  R + P +     + V + +  L+     G  I  
Sbjct: 121 HFAQAADWWRSVHPSMRELPRLYVRLGQHGLERITRSGHDIFR 163


>gi|294507486|ref|YP_003571544.1| phytoene synthase [Salinibacter ruber M8]
 gi|294343814|emb|CBH24592.1| phytoene synthase [Salinibacter ruber M8]
          Length = 269

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 72/247 (29%), Gaps = 10/247 (4%)

Query: 44  PLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPF--SV 101
              R +   L+++H+ L          + +   +  + D   +  +        P   + 
Sbjct: 19  RRRRPAAQALWHWHSAL------KSPAVPKGEDVTAYFDEERARAESGRPLRGMPEETAS 72

Query: 102 ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE 161
                   + L   +    +EA           D  Q E +    +     L   +    
Sbjct: 73  AAYEACETHGLTLDWLGTQVEAARLFVGETRFEDADQLETFVRLWAVPHARLLAHLAGLT 132

Query: 162 RYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
                  V + A     +  L+  LP    RG+L+ PLD L    +  E   +G  ++  
Sbjct: 133 NSVQIGWVDELARGFFHLAHLLR-LPADLARGRLFVPLDELRQYEVSAEQLRTGPATEGA 191

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHT 280
              +   +      L + R     +      A +       ++L       + + +    
Sbjct: 192 RRLLWKQSVRARDALQRGRSLADDLGLRKRYALLRYWHGALALLNELDRRDYDLWAAPIE 251

Query: 281 PNQLVRP 287
            ++L R 
Sbjct: 252 LSRLRRL 258


>gi|197105413|ref|YP_002130790.1| putative phytoene synthase protein [Phenylobacterium zucineum HLK1]
 gi|196478833|gb|ACG78361.1| putative phytoene synthase protein [Phenylobacterium zucineum HLK1]
          Length = 223

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 6/172 (3%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRIS-LSFLYYFHTELMRVRDTARNPITRDM 75
            S D   +   +R  D DR+L+        R + +  +Y F  EL R    A N +  +M
Sbjct: 1   MSDDLEDLDALIRRNDPDRWLSSRFIGERERRADVVAIYAFDHELARAPKVASNALLGEM 60

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFD 135
           RL WW+++ +   +G       P +  L   VR+  LP      MI+A + +     +  
Sbjct: 61  RLTWWREVLDEVFEGRPV-RRHPTAQALAVAVRRRGLPRDLLEAMIDARYRELDASPMDP 119

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLP 187
            +    +A   + R   LA MIL     +      + AG A  + +     P
Sbjct: 120 PEAL-AWARDTAGRAAELAAMILAPGSDAGPA---RAAGTAWAMSRRAAAAP 167


>gi|224760801|gb|ACN62390.1| phytoene synthase [Dunaliella bardawil]
          Length = 102

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 8/84 (9%), Positives = 28/84 (33%), Gaps = 1/84 (1%)

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGF 272
            G+  +R    +K   +    Y  +A + +  +      P +  + +   +L   + + +
Sbjct: 10  QGKVDERWRSFMKFQIKRARDYFQEAEDGVDCLDVKARWPVWSALILYRQILDSIEKNDY 69

Query: 273 KIVSHSHTPNQLVRPWYMLSSSIK 296
              S      +  +   +  +  +
Sbjct: 70  DNFSMRAYVPKAKKFTSLPMALFR 93


>gi|186683196|ref|YP_001866392.1| squalene/phytoene synthase [Nostoc punctiforme PCC 73102]
 gi|186465648|gb|ACC81449.1| Squalene/phytoene synthase [Nostoc punctiforme PCC 73102]
          Length = 276

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 70/266 (26%), Gaps = 43/266 (16%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-------- 76
           L+ L++     Y+   L PP  + +++  Y     +  + D          +        
Sbjct: 8   LQILKETSRTFYIPISLLPPGLQEAVASAYLCMRAIDEIEDHPEIDNATKAKLLRSISLT 67

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQY---------DLPNQYFLDMIEAHFFD 127
           LQ   D F                 E+   +R++                  M +   + 
Sbjct: 68  LQAGVDGFAVEAFFTGFNGYENTLEEVTLRIREWLLLAPETIAPRIWDATAAMSDRMAYW 127

Query: 128 SYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
           S  +  I+     + Y F ++  +  L + +    +    +       G       ++  
Sbjct: 128 SERNWKIYTESDLDRYTFGVAGAVGLLLSDLWTWYDGTQTNRTQAIGFGRGLQAVNILRN 187

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 RG  +FP                               E   + L  A    + 
Sbjct: 188 HTEDLRRGVDFFPEGWSAEN----------------------MQEYARRNLALAEAYTKG 225

Query: 246 IL--PDVFPAFIPVSITESVLKHAQN 269
           +   P +    IP+++    L    N
Sbjct: 226 LPTGPALDFCQIPLTLANGTLDALAN 251


>gi|300932772|ref|ZP_07148028.1| putative phytoene synthase [Corynebacterium resistens DSM 45100]
          Length = 282

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/271 (9%), Positives = 62/271 (22%), Gaps = 41/271 (15%)

Query: 46  YRISLSFLYYFHTELMRVRDTARNPITR-----DMRLQWWKDIFESSTKGLIAESISPFS 100
            R  +  +Y        + D A              L  ++    + T      S +P  
Sbjct: 1   MRTHIQNIYGMVRVADEIVDGAAAGANLTAARILEVLDEYERA--TLTAISDGFSPNPQL 58

Query: 101 VEL-----LSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
                    + + +  + + +    ++A          +D      Y    +  +  +  
Sbjct: 59  QAFANTARWAQLDEQHIRDFFHSMRLDAQSATQPEPVAYDSAAAAQYIHGSAGVIGLMCN 118

Query: 156 MILD-----------SERYSASLRVIKYAGIAQFIGQLICQLPIH-YHRGQLYFPLDILG 203
            +              E  + +       G A      +           +LY P   L 
Sbjct: 119 AVFMKTAELNGNPLSEEEQTQAHMAAYSLGSAFQKVNFLRDYYHDSADLARLYLPQ--LV 176

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-IPVSITES 262
           A GL                A +       + L  AR  M  + P       +   +   
Sbjct: 177 ADGLTES-------------AKRAIISEIHQELRTARLGMYLLPPQAHGGVQLAHDLFLE 223

Query: 263 VLKHAQNHGFKI-VSHSHTPNQLVRPWYMLS 292
           + +  ++    +            +      
Sbjct: 224 LTEKLESTPAAVIAQQRVRIPHHRKLLIAAR 254


>gi|239909605|gb|ABX64425.2| squalene synthase [Gibberella fujikuroi]
          Length = 462

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/297 (9%), Positives = 76/297 (25%), Gaps = 24/297 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +++    S +     R L                   + ++  Y     L  + D    
Sbjct: 27  HQRDPSTESPELKECFRYLDMTSRSFAAVIQELNHELLVPITLFYLCLRGLDTIEDDMTI 86

Query: 70  PITRDM-RLQWWKDIFES--STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           P+ + +  L+ +    E          E           +V +       +  +I+    
Sbjct: 87  PLDKKVPLLRNFHITMEEDGWQFHESQEKDKELLEHFDVVVTELKKIKAPYYQIIQEMTR 146

Query: 127 DSY-------------NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-- 171
                            + +   +++E Y   ++  +    T +      +      +  
Sbjct: 147 KMGNGMADYAQNEEMIKNGVQTIEEYELYCHYVAGLVGEGLTRLFVESELANPKLAERPS 206

Query: 172 ---YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
                        +I  +   +  G+ ++P +I        E         +    +   
Sbjct: 207 LTESMAQFLQKTNIIRDIHEDWQDGRRWYPKEIWSQHVDKWEDMFDPSQQTKALECVSAM 266

Query: 229 AELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               LK+  +    M  I          IP  +  + L+    +  +++  +    +
Sbjct: 267 VLDALKHSEECLFYMAGIKDQSVFNFVAIPQGMAIATLELVFRNP-EVLKRNVKITK 322


>gi|220932428|ref|YP_002509336.1| Squalene synthase [Halothermothrix orenii H 168]
 gi|219993738|gb|ACL70341.1| Squalene synthase [Halothermothrix orenii H 168]
          Length = 321

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 92/319 (28%), Gaps = 57/319 (17%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR----NPIT 72
                 F  + L  +     L   L      + +  +Y     L    D  +    +   
Sbjct: 1   MVDSLKFCKKMLPKVSRSFALTIPLLDDKLYMPVLTVYLQDRLLDNFEDEVKGIDIDTRK 60

Query: 73  RDM-------------------RLQWWKDIFESSTKGLIAESIS---PFSVELLSIVRQY 110
             M                   RL+ + D    +    + E           L   V++ 
Sbjct: 61  DLMDSVVALFDPDNEGTNYICNRLKGYSDYIPDNDLQALTEGCHLLKEVYQNLPHKVQR- 119

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI-------HLATMILDSERY 163
            L  ++  +M E          I   ++ + Y + ++  +         L   I D ++ 
Sbjct: 120 -LSFKWLNEMNEGMKKYLTLK-IKTFEELDEYCYYVAGTVGGFLTELVLLYGDIHDHKQK 177

Query: 164 SASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRIS 222
              L     AG+      +I  + I    R + ++P++ L   GL  E  L+    +  S
Sbjct: 178 EDLLENFTEAGLFLQKINIIRDIKIDLEERNKSFWPMEEL---GLSDEKILNPDYKEDAS 234

Query: 223 LAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV---------SITESVLKHAQNHGFK 273
            A+++       ++         I  +     +P          ++  + L+  +    K
Sbjct: 235 RALRVMLSNAKGHIEGLATYFEAIPDN-----LPGYRKFFSVNNALGIATLEELE-GNLK 288

Query: 274 IV--SHSHTPNQLVRPWYM 290
           +         +++     +
Sbjct: 289 LFYGRGKVKVSKMKFLKIL 307


>gi|144897583|emb|CAM74447.1| phytoene synthase-related protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 282

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 76/259 (29%), Gaps = 13/259 (5%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESST 88
           +  D +  +A LL     R  +   Y F              +   ++LQ      +   
Sbjct: 16  QHGDENFPVASLLLSSSLRPKILAFYRFARAA--DDIADAPDLDSTVKLQ----RLDEFE 69

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
           +GL   + +P ++ L   V        +   ++ A   D+  D          Y    ++
Sbjct: 70  RGLSGLAGAPQALALHEAVGGNSRLLGHAATLLHAFRRDAMTDRCRSWADLMAYCSCSAA 129

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGL 207
            +      +   ++             A  +   +      Y   G++Y P D + A GL
Sbjct: 130 PVGRFLLDLH--DQPQHLQARTDNLCAALQVLNHLQDCGKDYRALGRIYLPADWMAASGL 187

Query: 208 DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
              +  +      +   I +  +     + +A    + +        +  +IT  + +  
Sbjct: 188 TPNALAANGGDASLRHVIDLMLDRTEMLIEQAEPLPQAMDN--RRLAMETAITIGIARRL 245

Query: 268 QN--HGFKIVSHSHTPNQL 284
                    ++     + L
Sbjct: 246 AALLRQRDPLAQPVKLSPL 264


>gi|118766934|gb|ABL11393.1| CrtB [Mycobacterium marinum M]
          Length = 151

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               +P    +    R+Y +    F D +E+   D       D      Y    +  +  
Sbjct: 30  DHPDNPVLAAVSHTARRYGIGADLFEDFLESMRMDLTITDYPDRDALNTYMRGSAEAIGL 89

Query: 153 LATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
               IL +   +          G A  +   I  +     R ++Y P D L A G+DR+ 
Sbjct: 90  QLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLARNRIYLPADELAAYGVDRDV 149

Query: 212 FL 213
            +
Sbjct: 150 LM 151


>gi|118766922|gb|ABL11387.1| CrtB [Mycobacterium marinum]
          Length = 151

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               +P    +    R+Y +    F D +E+   D       D      Y    +  +  
Sbjct: 30  DHPDNPVLAAVSHTARRYGIGADLFEDFLESMRMDLSITDYPDRDALNTYMRGSAEAIGL 89

Query: 153 LATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
               IL +   +          G A  +   I  +     R ++Y P D L A G+DR+ 
Sbjct: 90  QLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLARNRIYLPADELAAYGVDRDV 149

Query: 212 FL 213
            +
Sbjct: 150 LM 151


>gi|296205390|ref|XP_002749745.1| PREDICTED: squalene synthetase-like isoform 2 [Callithrix jacchus]
          Length = 374

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/283 (8%), Positives = 64/283 (22%), Gaps = 41/283 (14%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S         L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCFTYLNQTSRSFAAVSQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
            + + +                      P      S +              +  F +S 
Sbjct: 89  SVEKKV----------------------PLLYNFHSFL-----------YQTDWRFTESK 115

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLIC 184
                  + F  Y   ++  +    + +  +  +   L           G+      +I 
Sbjct: 116 EKDRQVLEDFPTYCHYVAGLVGIGLSSLFSASEFEDPLVGEDTERANSMGLFLQKTNIIR 175

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
                   G+ ++P ++          F   +N +     +       L ++      + 
Sbjct: 176 DYLEDQQEGREFWPQEVWSRYVKKLGDFAKPENIELAVQCLNELITNALHHIPDVITYLS 235

Query: 245 YILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            +          IP  +  + L  A  +  ++        +  
Sbjct: 236 RLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFRGVVKIRKGQ 277


>gi|187734873|ref|YP_001876985.1| Squalene/phytoene synthase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424925|gb|ACD04204.1| Squalene/phytoene synthase [Akkermansia muciniphila ATCC BAA-835]
          Length = 299

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 85/309 (27%), Gaps = 63/309 (20%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L  +    YL+    P   R  ++  Y        V D    +   R   L+   +   
Sbjct: 7   LLSAVSRSFYLSMRFLPREMRPGVAVGYLLARATDTVADAVDMDCRERLALLRMMGETVA 66

Query: 86  SSTKGLIAE----------------------SISPFSVELLSIVRQYDLP--NQYFLDMI 121
            S    +A                       +  P  + LL  +  ++     Q    ++
Sbjct: 67  GSASREVAATCFGRLGVLSTIQTHRGEAELLARFPECLALLENLSPHERMLVRQVLASIV 126

Query: 122 EAHFFDSY----NDSIFDCKQFEHYAFRISSRLIHLATMI--------LDSERYSASLRV 169
           E   +D      + ++   +Q EHY + ++  +    T +          ++     LR 
Sbjct: 127 EGQAWDLMYFESHAAVSCPEQLEHYTYMVAGCVGEFWTRLGLLAQGPGFSTQPEEQLLRW 186

Query: 170 IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
            ++ G+   +  ++        RG+ Y P                           + + 
Sbjct: 187 GRHYGMGLQLVNILRDREEDLARGRSYLPAPD-----------------------DRPWL 223

Query: 230 ELGLKYLFKAREEMRYIL--PDVFPAFIPVSITESVLKHAQNHGFK-IVSHSHTPNQLVR 286
           +   ++L +       +      F   +P  +    L+  Q    +   S      +   
Sbjct: 224 DRAERWLKEGVFYAESLRNGRLRFSTVLPAWLGLDTLELLQRADRRHPSSGKVKIARGDV 283

Query: 287 PWYMLSSSI 295
              M  + +
Sbjct: 284 YLRMWKAFL 292


>gi|11139536|gb|AAG31746.1| putative phytoene synthase [Mycobacterium ulcerans]
 gi|118766914|gb|ABL11383.1| CrtB [Mycobacterium marinum]
 gi|118766924|gb|ABL11388.1| CrtB [Mycobacterium marinum]
          Length = 151

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               +P    +    R+Y +    F D +E+   D       D      Y    +  +  
Sbjct: 30  DHPDNPVLAAVSHTARRYGIGADLFEDFLESMRMDLSITDYPDRDALNTYMRGSAEAIGL 89

Query: 153 LATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
               IL +   +          G A  +   I  +     R ++Y P D L A G+DR+ 
Sbjct: 90  QLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLARNRIYLPADELAAYGVDRDV 149

Query: 212 FL 213
            +
Sbjct: 150 LM 151


>gi|315647262|ref|ZP_07900375.1| Squalene/phytoene synthase [Paenibacillus vortex V453]
 gi|315277464|gb|EFU40793.1| Squalene/phytoene synthase [Paenibacillus vortex V453]
          Length = 267

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/266 (8%), Positives = 69/266 (25%), Gaps = 43/266 (16%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L+      Y+         R +++  Y     +  + D    +   +   L+   + F+
Sbjct: 7   MLKKTSRTFYIPISYLELGLREAVASAYLCMRAIDEIEDHHELSNELKIELLRGIYETFK 66

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI-----------------EAHFFDS 128
           S    +             +++    +    +  +                      +  
Sbjct: 67  SQDDRMGVPQAHIVLSPYRTVLPDVTMQLDEWAALCPPTAAPIVYRYTAKMSLHMADWVQ 126

Query: 129 YNDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLP 187
           +  +I   +  + Y + ++  +  + + +    +   + L      G       ++    
Sbjct: 127 HGWNIHTEEDLDKYTYSVAGMVGEMLSELWLWYDGTQSDLTKAIAFGRGLQAVNILRNRE 186

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               RG  ++P                           K   +   + L  A   +  + 
Sbjct: 187 EDLKRGVDFYPDGW----------------------GFKEMQQYTRRNLQTADSYVADLK 224

Query: 248 --PDVFPAFIPVSITESVLKHAQNHG 271
             P +    IP+++  + +      G
Sbjct: 225 HGPALKFCKIPLALAHATVNLISAGG 250


>gi|118766918|gb|ABL11385.1| CrtB [Mycobacterium marinum]
          Length = 151

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 1/127 (0%)

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
                    +P    +    R+Y +    F D +E+   D       D      Y    +
Sbjct: 25  FFSDADHPDNPVLAAVNHTARRYGIGADLFEDFLESMRMDLTITDYPDRDALNTYMRGSA 84

Query: 148 SRLIHLATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG 206
             +      IL +   +          G A  +   I  +     R ++Y P D L A G
Sbjct: 85  EAIGLQLLPILGTVVPAREAIPYAAALGRAFQLTNFIRDVDEDLARNRVYLPADELAAYG 144

Query: 207 LDRESFL 213
           +DR+  +
Sbjct: 145 VDRDVLM 151


>gi|118766928|gb|ABL11390.1| CrtB [Mycobacterium marinum]
          Length = 151

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               +P    +    R+Y +    F D +E+   D       D      Y    +  +  
Sbjct: 30  DHPDNPVLAAVSHTARRYGIGADLFEDFLESMRMDLTITDYPDRDALNTYMRGSAEAIGL 89

Query: 153 LATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
               IL +   +          G A  +   I  +     R ++Y P D L A G+DR+ 
Sbjct: 90  QLLPILGTVVPAREAIPYAAALGRAFQLTNFIRDVDEDLARNRIYLPADELAAYGVDRDV 149

Query: 212 FL 213
            +
Sbjct: 150 LM 151


>gi|83814125|ref|YP_445602.1| hypothetical protein SRU_1478 [Salinibacter ruber DSM 13855]
 gi|83755519|gb|ABC43632.1| hypothetical protein SRU_1478 [Salinibacter ruber DSM 13855]
          Length = 269

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 10/247 (4%)

Query: 44  PLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPF--SV 101
              R +   L+++H+ L          + +   +  + D   +  +        P   + 
Sbjct: 19  RRRRPAAQALWHWHSAL------KSPAVPKGEDVTAYFDEERARAESGRPLRGMPEETAS 72

Query: 102 ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE 161
                   + L   +    +EA           D  Q E +    +     L   +    
Sbjct: 73  AAYEACETHGLTLDWLGTQVEAARLFVGETRFEDADQLETFVRLWAVPHARLLAHLAGLT 132

Query: 162 RYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRI 221
                  V + A     +  L+  LP    RG+L+ PLD L    +  +   +G  ++  
Sbjct: 133 NSVQIGWVDELARGFFHLAHLLR-LPADLARGRLFVPLDELRQYEVSAKQLRTGPATEGA 191

Query: 222 SLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVS-ITESVLKHAQNHGFKIVSHSHT 280
              +   +      L + R     +      A +       ++L       + + +    
Sbjct: 192 RRLLWKQSVRARDALQRGRSLADDLGLRKRYALLRYWHGALALLNELDRRDYDLWAAPIE 251

Query: 281 PNQLVRP 287
            ++L R 
Sbjct: 252 LSRLRRL 258


>gi|118766920|gb|ABL11386.1| CrtB [Mycobacterium liflandii 128FXT]
          Length = 151

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               +P    +    R+Y +    F D +E+   D       D      Y    +  +  
Sbjct: 30  DHPDNPVLAAVSHTARRYGIGADLFEDFLESMRMDLSITDYPDRDALNTYMRGSAEAIGL 89

Query: 153 LATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
               IL +   +          G A  +   I  +     R ++Y P D L A G+DR+ 
Sbjct: 90  QLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLGRNRIYLPADELAAYGVDRDV 149

Query: 212 FL 213
            +
Sbjct: 150 LM 151


>gi|297298905|ref|XP_002805302.1| PREDICTED: squalene synthase [Macaca mulatta]
          Length = 374

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/283 (8%), Positives = 68/283 (24%), Gaps = 41/283 (14%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
            + + + L                  +  F   L     ++    +    ++E       
Sbjct: 89  SVEKKVPL------------------LHNFHSFLYQPDWRFMESKEKDRQVLE------- 123

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLIC 184
                    F  Y   ++  +    + +  +  +   L           G+      +I 
Sbjct: 124 --------DFPTYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIR 175

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
                   G+ ++P ++          F   +N D     +       L ++      + 
Sbjct: 176 DYLEDQQEGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLS 235

Query: 245 YILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            +          IP  +  + L  A  +  ++   +    +  
Sbjct: 236 RLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 277


>gi|296221613|ref|XP_002756813.1| PREDICTED: squalene synthetase-like isoform 3 [Callithrix jacchus]
          Length = 374

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/283 (8%), Positives = 66/283 (23%), Gaps = 41/283 (14%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S         L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYTYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
            + + + L                  +  F   L     ++    +    ++E       
Sbjct: 89  SVEKKVPL------------------LHNFHSFLYQPDWRFTESKEKDRQVLE------- 123

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLIC 184
                    F  Y   ++  +    + +  +  +   L           G+      +I 
Sbjct: 124 --------DFPTYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIR 175

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
                   G+ ++P ++          F   +N +     +       L ++      + 
Sbjct: 176 DYLEDQQEGREFWPQEVWSRYVKKLGDFAKPENIELAVQCLNELITNALHHIPDVITYLS 235

Query: 245 YILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            +          IP  +  + L  A  +  ++        +  
Sbjct: 236 RLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFRGVVKIRKGQ 277


>gi|118766932|gb|ABL11392.1| CrtB [Mycobacterium ulcerans]
          Length = 151

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               +P    +    R+Y +    F D +E+   D       D      Y    +  +  
Sbjct: 30  DHPENPVLAAVSHTARRYGIGADLFEDFLESMRMDLSITDYPDRDALNTYMRGSAEAIGL 89

Query: 153 LATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
               IL +   +          G A  +   I  +     R ++Y P D L A G+DR+ 
Sbjct: 90  QLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLARNRIYLPADELAAYGVDRDV 149

Query: 212 FL 213
            +
Sbjct: 150 LM 151


>gi|17229297|ref|NP_485845.1| hypothetical protein alr1805 [Nostoc sp. PCC 7120]
 gi|17130895|dbj|BAB73504.1| alr1805 [Nostoc sp. PCC 7120]
          Length = 287

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 85/283 (30%), Gaps = 45/283 (15%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           KN ++ E +  R     L+ L++     Y+   + PP  + +++  Y     +  + D  
Sbjct: 4   KNQQRSENMDLRSDA--LQILKETSRTFYIPISILPPGLQEAVASAYLCMRAIDEIEDHP 61

Query: 68  R-NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYF--------- 117
             +  T+   L+      ++   G   ++ +       + + +  +  + +         
Sbjct: 62  TLDNPTKAKLLRGISLTLQAGVDGFPVDAFAAGFSGYENTLEEVTMRIREWSLLAPETIA 121

Query: 118 -------LDMIEAHFFDSYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLR 168
                    M +   + + N+  I      + Y F ++  +  L + +    +    +  
Sbjct: 122 PRIWDATAAMSDRMAYWAENNWKIHTESDLDRYTFGVAGAVGLLLSDLWAWYDGTQTNRT 181

Query: 169 VIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIF 228
           +    G       ++        RG  +FP                              
Sbjct: 182 LAIGFGRGLQAVNILRNHVEDLGRGVSFFPDGWDA----------------------NNM 219

Query: 229 AELGLKYLFKAREEMRYIL--PDVFPAFIPVSITESVLKHAQN 269
            E  L+ L  A    + +   P +    IP+++    +    N
Sbjct: 220 QEYALRNLALADAYTQALPDGPALNFCQIPLTLAHGTIDAIAN 262


>gi|145246052|ref|XP_001395275.1| squalene synthase [Aspergillus niger CBS 513.88]
 gi|134079987|emb|CAK48471.1| unnamed protein product [Aspergillus niger]
          Length = 472

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/299 (9%), Positives = 80/299 (26%), Gaps = 26/299 (8%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             + EK  +       + L               P   + +   Y     L  + D    
Sbjct: 31  HERNEKNETETEKACFKFLDLTSRSFSAVIKELHPELLMPVCVFYLTLRGLDTIEDDTSI 90

Query: 70  P-ITRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMI--- 121
           P  T++  L+ +KD  E            E      V+  +++ ++      +  +I   
Sbjct: 91  PLETKEPLLRGFKDFLEQDGWTFNGNRPEEKDRELLVQFHNVITEFKKMKPAYQAIIKDI 150

Query: 122 -----EAHFFDSYNDSIF-----DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK 171
                          +         ++++ Y + ++  +    T +     +     + +
Sbjct: 151 TDKMGNGMADYCRKAAFDDASVITVEEYDLYCYYVAGLVGEGLTRLFVEAEFGNPALLER 210

Query: 172 Y-----AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
                  G+      +I  +      G+ ++P +I        +     ++ +       
Sbjct: 211 ARLHKSMGLFLQKTNIIRDIREDDDDGRRFWPKEIWSKHVKQFDDLFKPEHREAALNCSS 270

Query: 227 IFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                 L+++      +  +          IP S+  + L         I   +    +
Sbjct: 271 EMVLNALEHVEDCLFYLAGLREQSVFNFCAIPQSMAIATL-ELCFRNPAIFERNIKITK 328


>gi|190405965|gb|EDV09232.1| squalene synthetase [Saccharomyces cerevisiae RM11-1a]
          Length = 279

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/238 (9%), Positives = 63/238 (26%), Gaps = 23/238 (9%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
            L     L               P  R  ++  Y     L  + D        +   L+ 
Sbjct: 39  LLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRH 98

Query: 80  WKDIFESSTKGLIAESISP----FSVELLSIVRQYDLPNQYFLDMI--------EAHFFD 127
           + +    +       +          +  SI+ ++      + ++I              
Sbjct: 99  FHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADY 158

Query: 128 SYNDSI-----FDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
             +++           ++ Y   ++  +       +      +E   ++ ++ +  G+  
Sbjct: 159 ILDENYNLNGLQTVHDYDVYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFL 218

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKY 235
               +I         G+ ++P +I        + F+  +N       I       L +
Sbjct: 219 QKTNIIRDYNEDLVDGRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLVLNALSH 276


>gi|118766930|gb|ABL11391.1| CrtB [Mycobacterium ulcerans]
          Length = 151

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 39/122 (31%), Gaps = 1/122 (0%)

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               +P         R+Y +    F D +E+   D       D      Y    +  +  
Sbjct: 30  DHPDNPVLAAASHTARRYGIGADLFEDFLESMRMDLSITDYPDRDALNTYMRGSAEAIGL 89

Query: 153 LATMILDSERYSASLRVI-KYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRES 211
               IL +   +          G A  +   I  +     R ++Y P D L A G+DR+ 
Sbjct: 90  QLLPILGTVVPAREAMPYAAALGRAFQLTNFIRDVDEDLARNRIYLPADELAAYGVDRDV 149

Query: 212 FL 213
            +
Sbjct: 150 LM 151


>gi|16126230|ref|NP_420794.1| hypothetical protein CC_1987 [Caulobacter crescentus CB15]
 gi|221235003|ref|YP_002517439.1| Phytoene synthase family protein [Caulobacter crescentus NA1000]
 gi|13423454|gb|AAK23962.1| hypothetical protein CC_1987 [Caulobacter crescentus CB15]
 gi|220964175|gb|ACL95531.1| Phytoene synthase family protein [Caulobacter crescentus NA1000]
          Length = 237

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 59/180 (32%), Gaps = 13/180 (7%)

Query: 26  RNLRDIDYDRYLACLL-SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
             +R +D DR+LA    + P  R  +  LY  + EL RV     N +  ++RL WW++  
Sbjct: 9   DLVRRVDPDRWLATRFIADPAARADVIALYGLNYELARVAGGVSNALMGEIRLTWWREAM 68

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E    G       P    L                + EA F D     + D      Y  
Sbjct: 69  EEIAAGKP-PRKHPNVEAL----ASSGFDPNALAVLAEARFVDLDEAPLKDEAAVLAYID 123

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +  L  LA         +A    +K A  A  +  L          G+   P D   A
Sbjct: 124 GTAGALAVLAAR---RLDPAADPHAVKGAARAWGLSGLWR----LKSAGRSRLPEDWTQA 176


>gi|261335000|emb|CBH17994.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 553

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 83/277 (29%), Gaps = 23/277 (8%)

Query: 18  SRDSLFVLRNLRDID-YDRYLACLLSPP-LYRISLSFLYYFHTELMRVRDTARNPITRD- 74
             D L +   L++ D Y   +  L  P    R +   ++     L + R T  +  ++  
Sbjct: 216 EEDYLKMEEELQEHDLYHFRIGELAFPEQRLRRNYYAMWLLAMYLNKARWTMLDVHSQRG 275

Query: 75  -------MRLQWWKDIFESSTKGLIAES-----ISPFSVELLSIVRQYD-LPNQYFLDMI 121
                  M+L +WK+      +     +       P      ++V Q   +   +     
Sbjct: 276 VKTTGAGMKLLFWKESVSQIMEKRSMPAGQFTDSHPVLRPFAAVVEQNPHMTKAFVRGFS 335

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQ 181
           EA           + KQ   +  R      +    +   +  +A   ++++ G A  + Q
Sbjct: 336 EARLRVIQQ--PGNVKQLFDHFDRYYGYFFNSLLEVAQVKDENAG-HLMQHIGRAIGLTQ 392

Query: 182 LI-CQLPIHYHRGQLYFPLDILGAVGLDRESFLS---GQNSDRISLAIKIFAELGLKYLF 237
                   +   G    P D+     ++     +         +   +     +    + 
Sbjct: 393 HCVMFWKKYARIGFTMLPADLCADNHVNLALLRNISLAARDRAVRRLLYDVMCIVKTEML 452

Query: 238 KAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKI 274
            A++   +  P  +P  +  +     L   Q   F +
Sbjct: 453 HAQQLAPHCSPAAWPIVMECTYANYYLGFLQRRDFNV 489


>gi|194382104|dbj|BAG58807.1| unnamed protein product [Homo sapiens]
          Length = 374

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/283 (8%), Positives = 68/283 (24%), Gaps = 41/283 (14%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
            + + + L                  +  F   L     ++    +    ++E       
Sbjct: 89  SVEKKVPL------------------LHNFHSFLYQPDWRFMESKEKDRQVLE------- 123

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLIC 184
                    F  Y   ++  +    + +  +  +   L           G+      +I 
Sbjct: 124 --------DFPTYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIR 175

Query: 185 QLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMR 244
                   G+ ++P ++          F   +N D     +       L ++      + 
Sbjct: 176 DYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLS 235

Query: 245 YILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            +          IP  +  + L  A  +  ++   +    +  
Sbjct: 236 RLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 277


>gi|304404769|ref|ZP_07386430.1| Squalene/phytoene synthase [Paenibacillus curdlanolyticus YK9]
 gi|304346576|gb|EFM12409.1| Squalene/phytoene synthase [Paenibacillus curdlanolyticus YK9]
          Length = 273

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/287 (9%), Positives = 78/287 (27%), Gaps = 48/287 (16%)

Query: 15  KIFSRDSLFVLRNLRDIDYDRYL-ACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPIT 72
            + S D+   +  L       Y+    L P   + +++  Y     +  + D    +   
Sbjct: 8   NVVSNDA---MAMLEKTSRTFYIPISRLVPG-LKEAVTSGYLCMRAIDEIEDHEEMDEAL 63

Query: 73  RDMRLQWWKDIFESSTKGLIAE---SIS-----PFSVELLSIVRQYDLPNQYFLDMIEAH 124
           +   L   +   ES       +   +       P +++L   ++         +    A 
Sbjct: 64  KSELLSGIQQALESDNPLEQTDKLLAPHKDVLPPVTMQLNDWLKLCPPTATPIVYRYTAM 123

Query: 125 F------FDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQ 177
                  +     SI   +  + Y + ++  +  + + +    +   + ++     G   
Sbjct: 124 MSQQMAEWVHTGWSIKTEEDLDRYTYSVAGMVGEMLSEMWQWFDGTKSDMKKAVAFGRGL 183

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLF 237
               ++        RG  +FP                               +   + L 
Sbjct: 184 QAVNIMRNRDEDLKRGVDFFPEGWSFK----------------------DMLQYTKRNLK 221

Query: 238 KAREEMRYI---LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
            A + +  +       F   IP+++  +        G   ++ +   
Sbjct: 222 VADDYIAELKDGPATSF-CKIPLALAHAT-TKLLAAGGNKLTRAAVL 266


>gi|167836251|ref|ZP_02463134.1| putative phytoene synthase [Burkholderia thailandensis MSMB43]
          Length = 134

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 33/133 (24%), Gaps = 3/133 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    E+ +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRREIEQTVKEVSDPTVGHAKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALAA---GNPSHPVSQALAAHHPDIAREAGALRTLVSGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLA 154
           Y          L 
Sbjct: 122 YVDHTGGTFAALV 134


>gi|74024976|ref|XP_829054.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70834440|gb|EAN79942.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 553

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 83/277 (29%), Gaps = 23/277 (8%)

Query: 18  SRDSLFVLRNLRDID-YDRYLACLLSPP-LYRISLSFLYYFHTELMRVRDTARNPITRD- 74
             D L +   L++ D Y   +  L  P    R +   ++     L + R T  +  ++  
Sbjct: 216 EEDYLKMEEELQEHDLYHFRIGELAFPEQRLRRNYYAMWLLAMYLNKARWTMLDVHSQRG 275

Query: 75  -------MRLQWWKDIFESSTKGLIAES-----ISPFSVELLSIVRQYD-LPNQYFLDMI 121
                  M+L +WK+      +     +       P      ++V Q   +   +     
Sbjct: 276 VKTTGAGMKLLFWKESVSQIMEKRSMPAGQFTDSHPVLRPFAAVVEQNPHMTKAFVRGFS 335

Query: 122 EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQ 181
           EA           + KQ   +  R      +    +   +  +A   ++++ G A  + Q
Sbjct: 336 EARLRVIQQ--PGNVKQLFDHFDRYYGYFFNSLLEVAQVKDENAG-HLMQHIGRAIGLTQ 392

Query: 182 LI-CQLPIHYHRGQLYFPLDILGAVGLDRESFLS---GQNSDRISLAIKIFAELGLKYLF 237
                   +   G    P D+     ++     +         +   +     +    + 
Sbjct: 393 HCVMFWKKYARIGFTMLPADLCADNHVNLALLRNISLAARDRAVRRLLYDVMCIVKTEML 452

Query: 238 KAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKI 274
            A++   +  P  +P  +  +     L   Q   F +
Sbjct: 453 HAQQLAPHCSPAAWPIVMECTYANYYLGFLQRRDFNV 489


>gi|32350178|gb|AAP55424.1| phytoene synthase 2 [Zea mays]
 gi|32350182|gb|AAP55426.1| phytoene synthase 2 [Zea mays]
 gi|32350226|gb|AAP55448.1| phytoene synthase 2 [Zea mays]
 gi|32350228|gb|AAP55449.1| phytoene synthase 2 [Zea mays]
 gi|32350298|gb|AAP55484.1| phytoene synthase 2 [Zea mays]
          Length = 90

 Score = 68.9 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 5/85 (5%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHG 271
             G+ + +    +K   +    +  +A + + ++      P    + +   +L   + + 
Sbjct: 1   FRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDAIEAND 60

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIK 296
           +   +      +  +   +  +  +
Sbjct: 61  YNNFTKRAYVGKAKKLLSLPLAYAR 85


>gi|261330809|emb|CBH13794.1| farnesyltransferase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 456

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/334 (11%), Positives = 80/334 (23%), Gaps = 69/334 (20%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMR 76
             D  F    LRD+     L  +      R ++   Y     L  V D  + P+  +   
Sbjct: 28  DEDLRFCYDVLRDVSRSFALVIMQLKAALRDAVCVFYLVLRALDTVEDDMQLPLEFKLRE 87

Query: 77  LQWWKDIFESSTKGLIA--------------------ESISPFSVE------------LL 104
           L  +       T  L                        + P                + 
Sbjct: 88  LPLFHTRLHDHTWRLDGVGEGRERELLQKFPHVSAAFSRLDPSFQSVIEDICRRMADGMC 147

Query: 105 SIVRQYDLPNQYFLDMIEAHFFD--SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE- 161
             +++ D       ++ E +  D  S   ++   + F+ Y   ++  +    T +     
Sbjct: 148 DFLQRTDTCKANNKEISEDNCHDGKSEKSAVETREDFDLYCHYVAGLVGLGLTQLFVRSG 207

Query: 162 ----RYSASLRVIKYAGIAQFIGQLICQLPIHY--HRGQLYFPLDILGAV---------- 205
                   ++    + G+      +I            ++++P +I G            
Sbjct: 208 LEKAALEENMTRANHMGLLLQKTNIIRDFYEDICESPPRVFWPREIWGQYTDDLHAFKGI 267

Query: 206 --------------GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
                         G             +    +       L +L    E +  +     
Sbjct: 268 TRPTNGSNDTACGEGRKYSDEEKEIIKSKAVDCLNAMVADALVHLPPVIEYLAELRDPTV 327

Query: 252 PAF--IPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            AF  IP  +  + L         +        +
Sbjct: 328 FAFCAIPQVMAVATL-ALVFDNPDVFHSRVKLTR 360


>gi|32526538|emb|CAD39195.1| squalene synthase [Stigmatella aurantiaca]
          Length = 328

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 65/223 (29%), Gaps = 18/223 (8%)

Query: 67  ARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
           A +    + RL         +   L   +  P +  + ++            D+      
Sbjct: 70  ASDGSGAEARLLQRTGTVLETFAALPEWTQPPIARCVRAMAD-------GMADVSRDLER 122

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILD------SERYSASLRVIKYAGIAQFIG 180
                 + D +    Y + ++  +  + T +        + +     R+    G A  + 
Sbjct: 123 APPASGLRDLEATLTYCYYVAGTVGEMLTDLFIGFAPQLAGQGKELRRLAPAXGRALQLI 182

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
            ++  +     RG  + P  ++ A GL   + L+ +N  R    +     +  +    + 
Sbjct: 183 NILKDIREDLERGYCWLPRTVMAAHGLTARTLLNPENRGRAVGMLNEMVAVARREADVSL 242

Query: 241 EEMRYILPD----VFPAFIPVSITESVLKHAQNHGFKIVSHSH 279
           E    +  D          P+      L   +N+   +     
Sbjct: 243 EYALRLPVDEPGLRLFCLWPLFFAVLSLSRLENNPA-VFEPKP 284


>gi|261407306|ref|YP_003243547.1| Squalene/phytoene synthase [Paenibacillus sp. Y412MC10]
 gi|261283769|gb|ACX65740.1| Squalene/phytoene synthase [Paenibacillus sp. Y412MC10]
          Length = 275

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/264 (7%), Positives = 67/264 (25%), Gaps = 41/264 (15%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--TARNPITRDMRLQ----WW 80
            L+      Y+         + +++  Y     +  + D     + +   + L     + 
Sbjct: 17  MLKKTSRTFYIPISYLELGLKEAVTSAYLCMRAIDEIEDHKELADELKVKLLLGIHDIFK 76

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYD----------LPNQYFLDMIEAHFFDSYN 130
            +    +    +         ++   +  +           +        +    +    
Sbjct: 77  SEDTMVTQTQHLLSPYQEILPDVTMQIDDWALLCPSSGAPIVNRYIAKMSLHMAQWVQSG 136

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
            +I   +  + Y + ++  +  + + +    +   +        G       ++      
Sbjct: 137 WNIHTEEDLDRYTYSVAGMVGEMLSELWLWHDGTQSDSTKAIAFGRGLQAVNILRNREED 196

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-- 247
            HRG  ++P                           K   +   + L  A   +  +   
Sbjct: 197 LHRGVDFYPDGW----------------------GFKEMQQYTRRNLQIADSYIADLKDG 234

Query: 248 PDVFPAFIPVSITESVLKHAQNHG 271
           P +    IP+S+  + +      G
Sbjct: 235 PALKFCKIPLSLAHATVNLISAGG 258


>gi|114623532|ref|XP_001141244.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 10
           [Pan troglodytes]
          Length = 358

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/209 (8%), Positives = 58/209 (27%), Gaps = 15/209 (7%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +  +   L           G
Sbjct: 149 RMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           +      +I         G+ ++P +++ 
Sbjct: 209 LFLQKTNIIRDYLEDQQGGREFWPQEVMA 237


>gi|32350232|gb|AAP55451.1| phytoene synthase 2 [Zea mays]
          Length = 90

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 5/85 (5%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHG 271
             G+ + +    +K   +    +  +A + + ++      P    + +   +L   + + 
Sbjct: 1   FRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDAIEAND 60

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIK 296
           +   +      +  +   +  +  +
Sbjct: 61  YNNFTKRAYVGKAKKLLSLPLAYAR 85


>gi|309388863|gb|ADO76743.1| Squalene/phytoene synthase [Halanaerobium praevalens DSM 2228]
          Length = 319

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 87/312 (27%), Gaps = 41/312 (13%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-- 75
           +    F  + L+ +     L   +     +  +   Y     L    D  + P  +    
Sbjct: 3   TESMKFARKILKKVSRSFALTIPMLDKEIQDEVLLTYLQDRILDNFEDEIQPPNFKLQQD 62

Query: 76  --------------------RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQ 115
                               +L                        ++            
Sbjct: 63  LMDRVSRIFSTEDYNRNQDFKLIKENSSLIEKADLEKLTRNIDLIYQVYQSFDDQIQKIS 122

Query: 116 Y-FLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLR------ 168
           + +L+ +        N  +      + Y + ++  +    T  +  +      +      
Sbjct: 123 HKWLEEMNQGMQKFLNKEVNTFADLDEYCYYVAGTVGGFLTETIIYKFEIKGEQKKLLKE 182

Query: 169 VIKYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKI 227
               AG+      LI  +      R + ++PL  L    +  +  +  Q  ++   A+ +
Sbjct: 183 NFNEAGLFLQKVNLIRDIREDLENRNKNFWPLKDL---DVTAKDLIEPQQKEKSMAALSV 239

Query: 228 FAELGLKYLFKAREEMRYILPDVFP--AFIPV--SITESVLKHAQNHGFKIV--SHSHTP 281
             +   +++   ++  + +  ++     F  V  S+  + L+  +N+  K+         
Sbjct: 240 MLKDLKEHIPALKKYYQALPSELNGYKKFFAVNNSLGLATLEKLENNP-KVFYGKKPVKT 298

Query: 282 NQLVRPWYMLSS 293
           ++L     ++ +
Sbjct: 299 SKL-TFLNIMRA 309


>gi|329926501|ref|ZP_08280915.1| phytoene/squalene synthetase [Paenibacillus sp. HGF5]
 gi|328939236|gb|EGG35598.1| phytoene/squalene synthetase [Paenibacillus sp. HGF5]
          Length = 275

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/264 (8%), Positives = 65/264 (24%), Gaps = 41/264 (15%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            L+      Y+         + +++  Y     +  + D         ++L         
Sbjct: 17  MLKKTSRTFYIPISYLELGLKEAVTSAYLCMRAIDEIEDHKELTDEVKVKLLLGIHDIFK 76

Query: 87  STKGLIAESIS------PFSVELLSIVRQYD--LP--------NQYFLDMIEAHFFDSYN 130
           S   ++  +             +   +  +    P               +    +    
Sbjct: 77  SEDTMVTRTQHLLSPYQEILPAVTMQIDDWALLCPSSCAPIVYRYIAKMSLHMAQWVQSG 136

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
            +I   +  + Y + ++  +  L + +    +   +        G       ++      
Sbjct: 137 WNIHTEEDLDRYTYSVAGMVGELLSELWLWHDGTQSDSTKAIAFGRGLQAVNILRNREED 196

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL-- 247
            HRG  ++P                           K   +   + L  A   +  +   
Sbjct: 197 LHRGVDFYPDGW----------------------GFKEMQQYTRRNLQIADSYIADLKDG 234

Query: 248 PDVFPAFIPVSITESVLKHAQNHG 271
           P +    IP+S+  + +      G
Sbjct: 235 PALKFCKIPLSLAHATVNLISAGG 258


>gi|257386965|ref|YP_003176738.1| Squalene/phytoene synthase [Halomicrobium mukohataei DSM 12286]
 gi|257169272|gb|ACV47031.1| Squalene/phytoene synthase [Halomicrobium mukohataei DSM 12286]
          Length = 351

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 82/305 (26%), Gaps = 39/305 (12%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
           ++   + D  +    ++ +     L+  L        +   Y        + D    P+ 
Sbjct: 6   QQATLADDRTWAFEAVQSVSRTFALSVELLDEPMTEWVCTGYLLCRTADTIEDEPTIPMG 65

Query: 73  RDMRLQW-------------WKDIFESSTKGLIAESISPFSV-----ELLSIVRQYDLPN 114
           R   L                +D   +      A+    ++V      ++ + R +  P 
Sbjct: 66  RRAELLETFDAMLAEESETTVEDFLSAVEPETPADGGDDWAVLGQTDRIVRLWRSFPDPV 125

Query: 115 QYFLDMIEAHFFDSYND-----------SIFDCKQFEHYAFRISSRLIHLATMILDSERY 163
           Q  +  I         D            +    + E Y + ++  +  L   +  +   
Sbjct: 126 QDGMRSITREMATGMADILRRHEDSGGLRLETLDELEEYCWYVAGTVGQLFMKLQTARAD 185

Query: 164 SASLRVI----KYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNS 218
                      +   +   +  +   +   +     +Y P + L    LD E+    ++S
Sbjct: 186 PDDPTPDPEDARAFALLLQLVNIAKDVRADWDEEHNVYLPGEWLAEEELDHEAVAEPEHS 245

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF-----IPVSITESVLKHAQNHGFK 273
             ++  +    +    Y   A+  +  +             +P  +    ++  +     
Sbjct: 246 TAVARVVGRVVDQAADYAHGAQRYLSTVPEGDNGGLLEATALPYLLALGTIRELRERTVD 305

Query: 274 IVSHS 278
            V   
Sbjct: 306 AVEQP 310


>gi|72393483|ref|XP_847542.1| farnesyltransferase [Trypanosoma brucei TREU927]
 gi|62175100|gb|AAX69249.1| farnesyltransferase, putative [Trypanosoma brucei]
 gi|70803572|gb|AAZ13476.1| farnesyltransferase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 456

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/334 (11%), Positives = 80/334 (23%), Gaps = 69/334 (20%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMR 76
             D  F    LRD+     L  +      R ++   Y     L  V D  + P+  +   
Sbjct: 28  DEDLRFCYDVLRDVSRSFALVIMQLKAALRDAVCVFYLVLRALDTVEDDMQLPLEFKLRE 87

Query: 77  LQWWKDIFESSTKGLIA--------------------ESISPFSVE------------LL 104
           L  +       T  L                        + P                + 
Sbjct: 88  LPLFHTRLHDHTWRLDGVGEGRERELLQKFPHVSAAFSRLDPSFQSVIEDICRRMADGMC 147

Query: 105 SIVRQYDLPNQYFLDMIEAHFFD--SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE- 161
             +++ D       ++ E +  D  S   ++   + F+ Y   ++  +    T +     
Sbjct: 148 DFLQRTDTCKANNKEISEDNCHDGKSEKSAVETREDFDLYCHYVAGLVGLGLTQLFVRSG 207

Query: 162 ----RYSASLRVIKYAGIAQFIGQLICQLPIHY--HRGQLYFPLDILGAV---------- 205
                   ++    + G+      +I            ++++P +I G            
Sbjct: 208 LEKAALEENMTRANHMGLLLQKTNIIRDFYEDICESPPRVFWPREIWGQYTDDLHAFKGI 267

Query: 206 --------------GLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF 251
                         G             +    +       L +L    E +  +     
Sbjct: 268 TRPTNGSNDTACGEGRKYSDEEKEIIKSKAVDCLNAMVADALVHLPPVIEYLAELRDPTV 327

Query: 252 PAF--IPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            AF  IP  +  + L         +        +
Sbjct: 328 FAFCAIPQVMAVATL-ALVFDNPDVFHSRVKLTR 360


>gi|32350252|gb|AAP55461.1| phytoene synthase 2 [Zea mays]
          Length = 86

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 5/85 (5%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHG 271
             G+ + +    +K   +    +  +A + + ++      P    + +   +L   + + 
Sbjct: 1   FRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDAIEAND 60

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIK 296
           +   +      +  +   +  +  +
Sbjct: 61  YNNFTKRAYVGKAKKLLSLPLAYAR 85


>gi|32350154|gb|AAP55412.1| phytoene synthase 2 [Zea mays]
 gi|32350156|gb|AAP55413.1| phytoene synthase 2 [Zea mays]
 gi|32350158|gb|AAP55414.1| phytoene synthase 2 [Zea mays]
 gi|32350160|gb|AAP55415.1| phytoene synthase 2 [Zea mays]
 gi|32350162|gb|AAP55416.1| phytoene synthase 2 [Zea mays]
 gi|32350164|gb|AAP55417.1| phytoene synthase 2 [Zea mays]
 gi|32350166|gb|AAP55418.1| phytoene synthase 2 [Zea mays]
 gi|32350168|gb|AAP55419.1| phytoene synthase 2 [Zea mays]
 gi|32350170|gb|AAP55420.1| phytoene synthase 2 [Zea mays]
 gi|32350172|gb|AAP55421.1| phytoene synthase 2 [Zea mays]
 gi|32350174|gb|AAP55422.1| phytoene synthase 2 [Zea mays]
 gi|32350176|gb|AAP55423.1| phytoene synthase 2 [Zea mays]
 gi|32350180|gb|AAP55425.1| phytoene synthase 2 [Zea mays]
 gi|32350184|gb|AAP55427.1| phytoene synthase 2 [Zea mays]
 gi|32350186|gb|AAP55428.1| phytoene synthase 2 [Zea mays]
 gi|32350188|gb|AAP55429.1| phytoene synthase 2 [Zea mays]
 gi|32350190|gb|AAP55430.1| phytoene synthase 2 [Zea mays]
 gi|32350192|gb|AAP55431.1| phytoene synthase 2 [Zea mays]
 gi|32350194|gb|AAP55432.1| phytoene synthase 2 [Zea mays]
 gi|32350196|gb|AAP55433.1| phytoene synthase 2 [Zea mays]
 gi|32350198|gb|AAP55434.1| phytoene synthase 2 [Zea mays]
 gi|32350200|gb|AAP55435.1| phytoene synthase 2 [Zea mays]
 gi|32350202|gb|AAP55436.1| phytoene synthase 2 [Zea mays]
 gi|32350204|gb|AAP55437.1| phytoene synthase 2 [Zea mays]
 gi|32350206|gb|AAP55438.1| phytoene synthase 2 [Zea mays]
 gi|32350208|gb|AAP55439.1| phytoene synthase 2 [Zea mays]
 gi|32350210|gb|AAP55440.1| phytoene synthase 2 [Zea mays]
 gi|32350212|gb|AAP55441.1| phytoene synthase 2 [Zea mays]
 gi|32350214|gb|AAP55442.1| phytoene synthase 2 [Zea mays]
 gi|32350216|gb|AAP55443.1| phytoene synthase 2 [Zea mays]
 gi|32350218|gb|AAP55444.1| phytoene synthase 2 [Zea mays]
 gi|32350220|gb|AAP55445.1| phytoene synthase 2 [Zea mays]
 gi|32350222|gb|AAP55446.1| phytoene synthase 2 [Zea mays]
 gi|32350224|gb|AAP55447.1| phytoene synthase 2 [Zea mays]
 gi|32350230|gb|AAP55450.1| phytoene synthase 2 [Zea mays]
 gi|32350234|gb|AAP55452.1| phytoene synthase 2 [Zea mays]
 gi|32350238|gb|AAP55454.1| phytoene synthase 2 [Zea mays]
 gi|32350240|gb|AAP55455.1| phytoene synthase 2 [Zea mays]
 gi|32350242|gb|AAP55456.1| phytoene synthase 2 [Zea mays]
 gi|32350244|gb|AAP55457.1| phytoene synthase 2 [Zea mays]
 gi|32350246|gb|AAP55458.1| phytoene synthase 2 [Zea mays]
 gi|32350248|gb|AAP55459.1| phytoene synthase 2 [Zea mays]
 gi|32350250|gb|AAP55460.1| phytoene synthase 2 [Zea mays]
 gi|32350254|gb|AAP55462.1| phytoene synthase 2 [Zea mays]
 gi|32350256|gb|AAP55463.1| phytoene synthase 2 [Zea mays]
 gi|32350258|gb|AAP55464.1| phytoene synthase 2 [Zea mays]
 gi|32350260|gb|AAP55465.1| phytoene synthase 2 [Zea mays]
 gi|32350262|gb|AAP55466.1| phytoene synthase 2 [Zea mays]
 gi|32350264|gb|AAP55467.1| phytoene synthase 2 [Zea mays]
 gi|32350266|gb|AAP55468.1| phytoene synthase 2 [Zea mays]
 gi|32350268|gb|AAP55469.1| phytoene synthase 2 [Zea mays]
 gi|32350270|gb|AAP55470.1| phytoene synthase 2 [Zea mays]
 gi|32350274|gb|AAP55472.1| phytoene synthase 2 [Zea mays]
 gi|32350276|gb|AAP55473.1| phytoene synthase 2 [Zea mays]
 gi|32350278|gb|AAP55474.1| phytoene synthase 2 [Zea mays]
 gi|32350280|gb|AAP55475.1| phytoene synthase 2 [Zea mays]
 gi|32350282|gb|AAP55476.1| phytoene synthase 2 [Zea mays]
 gi|32350284|gb|AAP55477.1| phytoene synthase 2 [Zea mays]
 gi|32350286|gb|AAP55478.1| phytoene synthase 2 [Zea mays]
 gi|32350288|gb|AAP55479.1| phytoene synthase 2 [Zea mays]
 gi|32350290|gb|AAP55480.1| phytoene synthase 2 [Zea mays]
 gi|32350292|gb|AAP55481.1| phytoene synthase 2 [Zea mays]
 gi|32350294|gb|AAP55482.1| phytoene synthase 2 [Zea mays]
 gi|32350296|gb|AAP55483.1| phytoene synthase 2 [Zea mays]
 gi|32350300|gb|AAP55485.1| phytoene synthase 2 [Zea mays]
 gi|32350302|gb|AAP55486.1| phytoene synthase 2 [Zea mays]
          Length = 90

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 5/85 (5%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 213 LSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHG 271
             G+ + +    +K   +    +  +A + + ++      P    + +   +L   + + 
Sbjct: 1   FRGKVTGKWRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDAIEAND 60

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIK 296
           +   +      +  +   +  +  +
Sbjct: 61  YNNFTKRAYVGKAKKLLSLPLAYAR 85


>gi|89276805|gb|ABD66601.1| putative squalene synthetase [Tuber borchii]
          Length = 417

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 83/301 (27%), Gaps = 30/301 (9%)

Query: 8   KNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA 67
           +N  KE     R        L               P   +S++  Y     L  + D  
Sbjct: 32  RNIEKESPTLRR----CFEFLDLTSRSFSAVIQELCPELCVSVALFYLILRGLDTIEDDM 87

Query: 68  RNPI-TRDMRLQWWKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
             P+  ++  L+ + +I E            E      VE  ++++++ L  +    +I+
Sbjct: 88  TIPLGIKEPLLRSFDEILEKEGWSFDGNGPKEKDRQLLVEFYTVIKEFALLPESHRVIIK 147

Query: 123 AHFFDSYNDSIF-------------DCKQFEHYAFRISSRLIHLATMILDSERYSASLRV 169
                  N                     ++ Y + ++  +    T +      +    +
Sbjct: 148 DITKKMGNGMADYANNAEHNVNGVNTVADYDLYCYYVAGLVGDGLTRLFVDTGKANPALL 207

Query: 170 IK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +       G+      +I          + ++P +I        E     +N +     
Sbjct: 208 ERPHLINSMGLFLQKTNIIRDYREDLDDKRRFWPKEIWTKHIEKYEELPLPENEEAALNC 267

Query: 225 IKIFAELGLKYLFKAREEMRYILPDVFPAF--IPVSITESVLKHAQNHGFKIVSHSHTPN 282
           I       L++  +    +  I       F  IP  +  + L     +   +   +    
Sbjct: 268 ISEMCLNSLQHADECLFYLAGIKDQSVFNFTAIPQVMAIATLALVFRNK-DVFQKNVKIP 326

Query: 283 Q 283
           +
Sbjct: 327 K 327


>gi|326916763|ref|XP_003204674.1| PREDICTED: squalene synthase-like [Meleagris gallopavo]
          Length = 357

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/259 (8%), Positives = 72/259 (27%), Gaps = 18/259 (6%)

Query: 44  PLYRISLSFLYYFHTELMRVRDTA--RNPITRDMRLQWWKDIFESSTKGLIAESISP--- 98
           P  R ++   Y     L  + D       +   M +++   +++   K + ++       
Sbjct: 3   PRLRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLIEFHSYLYQPEWKYMESKEKHRQVL 62

Query: 99  -----FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
                 S+E  ++ + Y          +     +     +    +++ Y   ++  +   
Sbjct: 63  EDFPTISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQSEWDRYCHYVAGLVGIG 122

Query: 154 ATMILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD 208
            + +  +      +           G+      +I         G+ ++P ++       
Sbjct: 123 LSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRYTKK 182

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKH 266
                  +N D     +       L+++      +  +          IP  +  + L  
Sbjct: 183 LSDLTKPENIDMAVQCLNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATL-A 241

Query: 267 AQNHGFKIVSHSHTPNQLV 285
           A  +  ++        +  
Sbjct: 242 ACYNNKQVFRGVVKIRKGQ 260


>gi|302780353|ref|XP_002971951.1| hypothetical protein SELMODRAFT_96714 [Selaginella moellendorffii]
 gi|300160250|gb|EFJ26868.1| hypothetical protein SELMODRAFT_96714 [Selaginella moellendorffii]
          Length = 392

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/296 (9%), Positives = 74/296 (25%), Gaps = 34/296 (11%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQW 79
             +  R L  +     +         R ++   Y     L  V D    P  T+   L+ 
Sbjct: 37  MAYCYRILLLVSRSFAVVVQHLNQEIRDAVCIFYVVLRALDTVEDDMSIPVETKTTVLEE 96

Query: 80  WKDIFESSTKGLIAESI---------SPFSVELLSIVRQYDLPNQYFLDMI-EAHFFDSY 129
           +    E  +   + +           +  S+  L + ++Y          +         
Sbjct: 97  FYKHLEDPSWRFVCKWNFYIVLMKNFNHLSLAFLQLSKEYQCVISDITKRMGYGMAEFIR 156

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA---------------SLRVIKYAG 174
            + +     ++ Y + ++  +    + + +S R                          G
Sbjct: 157 KEVVVTVSDYDKYCYYVAGLVGVGLSHLFNSSRLEDLDQRLIEPDNDQSLVPEYPAISMG 216

Query: 175 IAQFIGQLICQLPIHYHR---GQLYFPLDILGAVGLDR--ESFLSGQNSDRISLAIKIFA 229
                  +I       +     ++++P +I G          F    N       +    
Sbjct: 217 RFLQKVNIIRDYLEDINELPAPRMFWPREIWGKYAPTSLLSDFRDESNEKEAVECLNDMI 276

Query: 230 ELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
              L++  +    M  +          +P  +  +       +  ++        +
Sbjct: 277 TDCLRHAPECLFYMSKLKNPSVFRFCAVPQVMAIAT-AAVCYNNPQVFRGVVKIRR 331


>gi|327288076|ref|XP_003228754.1| PREDICTED: squalene synthase-like [Anolis carolinensis]
          Length = 468

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/296 (7%), Positives = 77/296 (26%), Gaps = 17/296 (5%)

Query: 7   TKNTRKEEKIFSRDSLFVLRNLRDIDYDRY-LACLLSPPLYRISLSFLYYFHTELMRVRD 65
           ++  +  +   S+      R L     +   +         R ++   Y     L  V D
Sbjct: 85  SQKAQASKDSLSKSLCLCYRYLYQSSQNYATVIIQTLNGELRDAVCIFYLVLRALDTVED 144

Query: 66  TARNPITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQ 115
                +   + +            W+ +  +     + E     S+E   + + Y     
Sbjct: 145 DVTISLETKVPMLHNFHSYLYQPDWRFMDSNDKDKQVLEDFPVISLEFRKLKKVYQDVIA 204

Query: 116 YFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK---- 171
                +     +     +   + ++ Y   ++  +      +  + +    +        
Sbjct: 205 DICRKMGLGMAEFLEKKVESEEDWDKYCHYVAGLVGIGLEQLFSASKLVDPVVDQDTELA 264

Query: 172 -YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAE 230
              G+ Q    +I         G+ ++P ++              +N D+    +     
Sbjct: 265 NSMGVFQQKINIIRDYHEDLLVGREFWPREVWSKYAKTMSDLAKPENIDKGVQCLNELIT 324

Query: 231 LGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQ-NHGFKIVSHSHTPNQLV 285
             L ++      +  +       F  +   + +       +  +++       +  
Sbjct: 325 NALHHIPDILTHLSQLKNQSVFKFCAIPQVKGIATLVAFYNNPQVLQGLVKIRKGQ 380


>gi|75911004|ref|YP_325300.1| farnesyl-diphosphate farnesyltransferase [Anabaena variabilis ATCC
           29413]
 gi|75704729|gb|ABA24405.1| farnesyl-diphosphate farnesyltransferase [Anabaena variabilis ATCC
           29413]
          Length = 276

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 77/266 (28%), Gaps = 43/266 (16%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           L+ L+D     Y+   + P   + +++  Y     +  + D    +  T+   L+     
Sbjct: 8   LQILKDTSRTFYIPISILPSGLQEAVASAYLCMRAIDEIEDHPTLDNPTKAKLLRGISLT 67

Query: 84  FESSTKGLIAES-------ISPFSVELLSIVRQY---------DLPNQYFLDMIEAHFFD 127
            ++   G   ++             E+   +R++                  M +   + 
Sbjct: 68  LQAGVDGFPVDAFAAGFSGYENTLAEVTMRIREWSLLAPETIAPRIWDATAAMSDRMAYW 127

Query: 128 SYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
           + N+  I+     + Y F ++  +  L + +    +    +  +    G       ++  
Sbjct: 128 AENNWKIYTESDLDRYTFGVAGAVGLLLSDLWTWYDGTQTNRTLAIGFGRGLQAVNILRN 187

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 RG  +FP                               E  L+ L  A    + 
Sbjct: 188 HVEDLGRGVSFFPDGWDA----------------------NNMQEYALRNLALADAYTQA 225

Query: 246 IL--PDVFPAFIPVSITESVLKHAQN 269
           +   P +    IP+++    +    N
Sbjct: 226 LPDGPALNFCQIPLTLAHGTIDAIAN 251


>gi|302538279|ref|ZP_07290621.1| predicted protein [Streptomyces sp. C]
 gi|302447174|gb|EFL18990.1| predicted protein [Streptomyces sp. C]
          Length = 300

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 71/286 (24%), Gaps = 8/286 (2%)

Query: 17  FSRDSLFVLRNLRDIDYDRYLACLLSP-PLYRISLSFLYYFHTELMRVRDTARNPITRDM 75
              D     R +   +   YL   L   P     LS    F   +  V      P  R  
Sbjct: 18  LRADHTHAARRVLRREPAPYLTLRLLAAPPLVPWLSTGLAFMNLVDDVA-ETGTPGVRAA 76

Query: 76  RLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF-DSYNDSIF 134
            L       ES+      +S  P        VR   LP+ +    ++     ++  D   
Sbjct: 77  GLAALAGRVESALA--TGDSPDPLLRAYAHAVRDRGLPDHWITRFLDGAATAEAAFDGFA 134

Query: 135 DCKQFEHYAFRIS-SRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRG 193
             + F+ Y    +   ++    +              +    A      +  L      G
Sbjct: 135 AEEDFQAYLDAYAWPGIMVFTGLQYQGGPAPDQAAGWRAFVDAAQRVDFLADLAGDLAEG 194

Query: 194 QLYFPLDILGAVGLDR-ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFP 252
           +L  P   L    +         + +  +   +          L  A   +    P + P
Sbjct: 195 RLCVPRSRLAEHSVTPGPDLERARETPAVRALLAAECARARTALAAAEGILDLAEPGLRP 254

Query: 253 AF-IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
                  +    L   +  G   +              ++ +  ++
Sbjct: 255 VVAAMTELMGHQLAAVEKAGTGALRKDVGYGLAAPVGTLVRALRRR 300


>gi|156058400|ref|XP_001595123.1| hypothetical protein SS1G_03211 [Sclerotinia sclerotiorum 1980]
 gi|154700999|gb|EDO00738.1| hypothetical protein SS1G_03211 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 218

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 64/219 (29%), Gaps = 56/219 (25%)

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHY----- 190
               E YA    S L++L    L  +  +A   V  + G A  I  ++  LP+       
Sbjct: 1   MDAVEMYAENTYSTLMYLTLAALPLQSMAA-DHVASHIGKAAGIAAVLRGLPLIAFPPPP 59

Query: 191 -------------------HRGQLYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAE 230
                               +G +  PLD++   G+  E  L  G  +  +  AI   A 
Sbjct: 60  NHHSNNAAFGGALGGSAGGRQGAVVLPLDVMAESGVKEEDVLRHGAEAPGLKDAIFTVAT 119

Query: 231 LGLKYLFKAREEMRYILP------------------------------DVFPAFIPVSIT 260
               +L  ARE ++ +                                  F  F+    T
Sbjct: 120 RANDHLITAREMLKNLQAGKDAGHEFEHQGEDGHYYAESENTQVSDIERGFGVFMQAVPT 179

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
              L+  +   F I        +   P+    +  ++ F
Sbjct: 180 RLWLEKLEKLDFDIFRPELLAREWKLPYKAYWAYTRRNF 218


>gi|299744518|ref|XP_001831087.2| squalene synthase [Coprinopsis cinerea okayama7#130]
 gi|298406164|gb|EAU90709.2| squalene synthase [Coprinopsis cinerea okayama7#130]
          Length = 514

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/302 (9%), Positives = 75/302 (24%), Gaps = 28/302 (9%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI-TRDMRL 77
                    L                    ++   Y     L  + D    P   +   L
Sbjct: 47  ESMRRCWHFLDLTSRSFAAVIKELDGDLARTICMFYLVLRGLDTIEDDMTIPDDVKQPIL 106

Query: 78  QWWKDIF----ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
           + + +               E      VE  +IV + +    ++  +I            
Sbjct: 107 RRFHEYTVTPGWKYEGCGPNEKDRQLLVEYDTIVEEVNRLAPHYKTVIIDICRKMETGMA 166

Query: 134 F--------------DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
                             +++ Y   ++  +    + I  +    A     +       G
Sbjct: 167 DYAHKAATTGSIYLSTIAEYDLYCHYVAGLVGEGLSRIFSASGKEAPWLGEQLELSNSMG 226

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR-ESFLSGQNSDRISLAIKIFAELGL 233
           +      +I          + ++P +I G+ G    +      N +R   A        L
Sbjct: 227 LLLQKTNIIRDYREDTDEQRYFWPKEIWGSFGFKEMKEMYEEGNKERAQWAQSAMILDAL 286

Query: 234 KYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
           ++   + + ++ +          IP ++  + L         +   +    +      ++
Sbjct: 287 RHCEDSLDYLKMLKNQSVFNFCAIPATMAIATL-ELCFMNPAMFQRNIKIRKAEAARLIM 345

Query: 292 SS 293
            S
Sbjct: 346 RS 347


>gi|260906399|ref|ZP_05914721.1| phytoene synthase [Brevibacterium linens BL2]
          Length = 295

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 67/302 (22%), Gaps = 31/302 (10%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            +  E             + +      LA  L    YR  +  +Y        + D   +
Sbjct: 3   PQTHEVFSHTAQQAAAAVISNYSTSFGLATRLLGLTYRHHIRNIYALVRIADEIVDGLAS 62

Query: 70  P---ITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
                  + R         + +      S +          R   +          +   
Sbjct: 63  DAGLDAGEQRQLLDNFAAATRSALHFGISDNLIIHAFAQTARTTGITFDLIEPFFASMRA 122

Query: 127 DSYNDSIF----DCKQFEHYAFRISSRLIHLATMILDSERY------SASLRVIKYAGIA 176
           D    S         +   Y +  +  +  +   +  S++              +  G A
Sbjct: 123 DLSAPSAPVRGLPADEHRDYVYGSAEVVGLMCLKVFLSDQNRTPTEVETLEFGARQLGAA 182

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYL 236
                 +  L     R         L    L  ES LS  +     + I+         L
Sbjct: 183 FQNINFLRDLADDSVR---------LHRSYLTTESRLSDSDKTAWVIIIRQQ-------L 226

Query: 237 FKAREEMRYILPDVFPAFIPVSITESVL-KHAQNHGFKIV-SHSHTPNQLVRPWYMLSSS 294
             A+     +  D   A    +   + L           +         +V+      + 
Sbjct: 227 ADAQATFSLLPKDARAAVRSAAALFAALNDRIALTPVDRLYQERVRIPNVVKMRLASRAI 286

Query: 295 IK 296
           + 
Sbjct: 287 LS 288


>gi|295688855|ref|YP_003592548.1| phytoene synthase family protein [Caulobacter segnis ATCC 21756]
 gi|295430758|gb|ADG09930.1| phytoene synthase family protein [Caulobacter segnis ATCC 21756]
          Length = 237

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 60/180 (33%), Gaps = 13/180 (7%)

Query: 26  RNLRDIDYDRYLACLL-SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
             +R +D DR+L     + P  R  +  LY  + EL RV     N +  ++RL WW++  
Sbjct: 9   DLVRRVDPDRWLTTRFIADPAARADVIALYGLNYELARVAGGVSNALMGEIRLTWWREAM 68

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E    G  A    P    L        L       + EA F D     + D      Y  
Sbjct: 69  EEVAAGK-APRKHPNVEAL----AASGLDPNALAALSEARFIDLDEGPLKDEAAVMAYVD 123

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +  L  LA         SA+   +K A  A  +  L          G+   P     A
Sbjct: 124 GTAGALAVLAAR---RLDPSANPHAVKGAARAWGLAGLWR----LKSAGRSRLPESWTQA 176


>gi|297298907|ref|XP_001085624.2| PREDICTED: squalene synthase isoform 1 [Macaca mulatta]
          Length = 353

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/257 (9%), Positives = 72/257 (28%), Gaps = 18/257 (7%)

Query: 46  YRISLSFLYYFHTELMRVRDTARNPITRDMRLQ----------WWKDIFESSTKGLIAES 95
            R ++   Y     L  + D     + + + L            W+ +        + E 
Sbjct: 1   MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 60

Query: 96  ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
               S+E  ++  +Y          +     +  +  +   ++++ Y   ++  +    +
Sbjct: 61  FPTISLEFRNLAEKYQTVIADICQRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120

Query: 156 MILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
            +  +  +   L           G+      +I         G+ ++P ++         
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSRYVKKLG 180

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQ 268
            F   +N D     +       L ++      +  +          IP  +  + L  A 
Sbjct: 181 DFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AAC 239

Query: 269 NHGFKIVSHSHTPNQLV 285
            +  ++   +    +  
Sbjct: 240 YNNQQVFKGAVKIRKGQ 256


>gi|167824664|ref|ZP_02456135.1| putative phytoene synthase [Burkholderia pseudomallei 9]
          Length = 152

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 35/133 (26%), Gaps = 3/133 (2%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEH 141
               +           P S  L +              ++  +  D       D      
Sbjct: 65  KELAALA---SGHPSHPVSQALAAHHPDITRETDALRTLVAGYGMDLEQARYLDFANLRR 121

Query: 142 YAFRISSRLIHLA 154
           YA +       L 
Sbjct: 122 YADQTGGMFAALV 134


>gi|328767297|gb|EGF77347.1| hypothetical protein BATDEDRAFT_14137 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 386

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/268 (8%), Positives = 59/268 (22%), Gaps = 23/268 (8%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT 72
            E             L                  +  +   Y     L  + D    P+ 
Sbjct: 38  PESSDQHTWAMCYYFLNKTSRSFARVIQELDKELQDPICIFYLVLRGLDTIEDDMSIPLK 97

Query: 73  RDMRLQWWKDIFESS----TKGLIAESISPFSVE-LLSIVRQYDLPNQYFLDMI------ 121
             + L                           +E    ++ Q+      +   I      
Sbjct: 98  TKLPLLESFHEINYKKGWTFHECGPTEKDRILLERYDVVIDQFLKLKPKYQKTITDITKR 157

Query: 122 --EAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYAG 174
                        +   + F+ Y   ++  +    T +      +S+     + +    G
Sbjct: 158 MGAGMADFVSGKKVTTLEDFDLYTHYVAGLVGIGLTHLFSDSGLESKALEEHMDLANRMG 217

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAV---GLDRESFLSGQNSDRISLAIKIFAEL 231
           +      ++         G+L++P D+           E+    +N       +      
Sbjct: 218 LFLQKVNILKDYLTDIKDGRLFWPRDVWELYVGKDEGVEALARPENLQNAVACLNHLCAN 277

Query: 232 GLKYLFKAREEMRYILPDVFPAFIPVSI 259
            L  +    + +  +           +I
Sbjct: 278 ALHLVPDCLDYLALL--KNQSVLRFAAI 303


>gi|322829123|gb|EFZ32659.1| hypothetical protein TCSYLVIO_989 [Trypanosoma cruzi]
          Length = 545

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 58/212 (27%), Gaps = 13/212 (6%)

Query: 73  RDMRLQWWKDIFES-----STKGLIAESISPFSVELLSIVRQYD-LPNQYFLDMIEAHFF 126
             M+L +WK+                    P      ++V Q   L   +     +A   
Sbjct: 272 AGMKLLFWKESVNQIVEKRQMAAGQFTDSHPVLRPFAAVVEQNPHLTKAFIRGFTDARLR 331

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI-CQ 185
                   + KQ   +  R      +    +   +  +A   ++++ G A  + Q     
Sbjct: 332 VLQQ--PGNMKQLFDHFDRYYGYFFNSLLEVTHVKDSTA-EHMLQHIGRAIGLTQHCVML 388

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLS---GQNSDRISLAIKIFAELGLKYLFKAREE 242
              + + G    P D+     ++     +         +   +     +    +  A++ 
Sbjct: 389 WKKYANIGFTMLPADLCADNHVNIALLKNISLASRDRAVRKLLYDVMCITKMEMLHAKQL 448

Query: 243 MRYILPDVFPAFIPVSITESVLKHAQNHGFKI 274
                P  +P  +        L   Q   F +
Sbjct: 449 APSCSPTAWPVVMECVYANYYLGFLQRRDFNV 480


>gi|219120402|ref|XP_002180940.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407656|gb|EEC47592.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 314

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/304 (8%), Positives = 78/304 (25%), Gaps = 32/304 (10%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
             F    L  +           P    + +   Y     L  + D      + + ++ + 
Sbjct: 1   LAFCDDILVHVSRSFAAVIRQLPDRLLVDILVFYLVLRALDTIEDDTTAFASPEEKIDYL 60

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDM------------------IE 122
            +   ++              +   +++Q+   ++ +  +                  + 
Sbjct: 61  LNFHRTALADPDWNLQHVGQGDERRLLQQFPQCHRVYAKLAAPSRRVVADVTARMATGMA 120

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA-----SLRVIKYAGIAQ 177
                       + +Q+  Y   ++  +    + +  +    A      L +    G+  
Sbjct: 121 EFVRKDLGQGTTNTEQYNRYCHFVAGLVGEGLSRLFAASGLEAGSFAGELHLSDQMGLFL 180

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAV------GLDRESFLSGQNSDRISLAIKIFAEL 231
               +I      Y   + ++P  +          G   +S  +    DR    +      
Sbjct: 181 QKTNIIRDYLEDYVDQRAFWPQSVWKKYAATDDLGYFAQSIGTDDGRDRALGCLNELVTD 240

Query: 232 GLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
            L+ +      +  +          IP  +  + L     H   + +      + +    
Sbjct: 241 ALELVPDCLTYLARLQCQEIFRFCAIPQVMAIATLDK-CYHNVNVFTGVVKIRKGLSCKL 299

Query: 290 MLSS 293
           +L +
Sbjct: 300 LLRT 303


>gi|157877212|ref|XP_001686936.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68130011|emb|CAJ09319.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 392

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 78/275 (28%), Gaps = 23/275 (8%)

Query: 20  DSLFVLRNLRDIDYDRY-LACLLSP-PLYRISLSFLYYFHTELMRVRDTARNPITRD--- 74
           D + +   LRD D   Y +  +  P    R     L+     L + R +     ++    
Sbjct: 48  DYIKLEDELRDFDLFHYRIGEMAYPDQAMRRDYYALWNLAMSLNKARWSMLEVHSQRGMK 107

Query: 75  -----MRLQWWKD---IFESSTKGLIAE--SISPFSVELLSIVRQYD-LPNQYFLDMIEA 123
                M+L +WK+         K    E     P      + V +   +   +     +A
Sbjct: 108 TTGAGMKLIFWKESVGAVMEKRKMCTGEFTDSHPVLRPFAAAVERNPHMTKAFVRGFTDA 167

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                      + +Q   +  +      +    +   +   A+  ++ + G A  +    
Sbjct: 168 RLRVIQQ--PGNVQQLFDHFDKFYGYFFNSLLEVTHIKD-EATEHLMTHVGRATGLTNHC 224

Query: 184 -CQLPIHYHRGQLYFPLDILGAVGLDRESFLS---GQNSDRISLAIKIFAELGLKYLFKA 239
                 +   G    P D+     ++     +         +   +     +    +  A
Sbjct: 225 VMFWKKYARLGFTMLPADLCADNHVNLGLLKNIPLASRDRAVRKVLFDVMCIVKDEMLHA 284

Query: 240 REEMRYILPDVFPAFIPVSITESVLKHAQNHGFKI 274
           ++  + + P  +P  +        L   Q   F +
Sbjct: 285 QKCAKDVPPKAWPIVMECLYANYYLGFLQRRDFNV 319


>gi|240275322|gb|EER38836.1| GTP binding protein [Ajellomyces capsulatus H143]
          Length = 479

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 67/201 (33%), Gaps = 37/201 (18%)

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQ--------YDLPN 114
           + DT   P    MRLQ+W+D    +  G       P ++ L S + +          +  
Sbjct: 2   IPDTTSTPTIGLMRLQFWRDTITRTLAGQP--PKEPIAILLASALSELETRTGGQARISK 59

Query: 115 QYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAG 174
            +FL MI +      N         E YA    S L++L    L     +A   +  + G
Sbjct: 60  GWFLRMINSREQYLTNTPYTSISALESYAENTYSTLLYLTLSALPLTSVTA-DHLASHIG 118

Query: 175 IAQFIGQLICQLP---------IHYHRGQ----------------LYFPLDILGAVGLDR 209
            A  I  ++  +P          H ++                  +  PLD++   GL  
Sbjct: 119 KAAGISTVLRGIPLIAFPAPPSHHSNQPGGLGGGAGGGSGARVGTITLPLDVMAETGLKE 178

Query: 210 ESFLS-GQNSDRISLAIKIFA 229
           E     G  +  +  A+   A
Sbjct: 179 EDIFRHGAEAPGLRDAVFTVA 199


>gi|254424950|ref|ZP_05038668.1| Squalene and phytoene synthases superfamily [Synechococcus sp. PCC
           7335]
 gi|196192439|gb|EDX87403.1| Squalene and phytoene synthases superfamily [Synechococcus sp. PCC
           7335]
          Length = 279

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/264 (8%), Positives = 70/264 (26%), Gaps = 43/264 (16%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           L  L+      ++   + P   + +++  Y     + ++ D    + + +   L+     
Sbjct: 8   LALLKATSRTFFIPISILPNELKEAVASAYLCMRAIDQIEDHPDMDFVLKSKLLRQLSLN 67

Query: 84  FESSTKGLIAESISPFSVELLSIVRQ----------------YDLPNQYFLDMIEAHFFD 127
            ++ T+   A   +       + + +                          M +   + 
Sbjct: 68  LQAGTESSNAADFAQGLKAFDADLEEVTLRIGEWALLAPETISPRIWDATAAMADRMAYW 127

Query: 128 SYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
           +  +  I +    + Y F ++  +  + + +    +   ++       G       ++  
Sbjct: 128 AERNWLIENEADLDRYCFSVAGSVGLMLSDLWAWHDGTPSNRTEAIGFGRGLQSVNILRN 187

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 R   ++P     A                         +   + L  A      
Sbjct: 188 HTEDKVRSVEFYPPGWTDA----------------------DMQQYARRNLALADAYTNA 225

Query: 246 IL--PDVFPAFIPVSITESVLKHA 267
           +   P +    IP+++    L   
Sbjct: 226 LPKGPALTFCRIPLALAHGTLDAL 249


>gi|322490945|emb|CBZ26209.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 392

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/275 (11%), Positives = 73/275 (26%), Gaps = 23/275 (8%)

Query: 20  DSLFVLRNLRDIDYDRYLA--CLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT----- 72
           D + +   LRD D   Y            R     L+     L + R +     +     
Sbjct: 48  DYIKLEDELRDFDLFHYRIGEMGYPDQAMRRDYYALWNLAMSLNKARWSMLEVHSQHGMK 107

Query: 73  ---RDMRLQWWKD---IFESSTKGLIA--ESISPFSVELLSIVRQYD-LPNQYFLDMIEA 123
                M+L +WK+         K          P      + V +   +   +     +A
Sbjct: 108 STGAGMKLIFWKESVGAIMEKRKMCTGQFTDSHPVLRPFAAAVERNPHMTKAFVRGFTDA 167

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                      + +Q   +  +      +    +   +   A+  ++ + G A  +    
Sbjct: 168 RLRVIQQ--PGNVQQLFDHFDKFYGYFFNSLLEVTHIKD-EATEHLMTHIGRATGLTNHC 224

Query: 184 -CQLPIHYHRGQLYFPLDILGAVGLDRESFLS---GQNSDRISLAIKIFAELGLKYLFKA 239
                 +   G    P D+     ++     +         +   +     +    +  A
Sbjct: 225 VMFWKKYARLGFTMLPADLCADNHVNLGLLKNIPLASRDRAVRKVLFDVMCIVKDEMLHA 284

Query: 240 REEMRYILPDVFPAFIPVSITESVLKHAQNHGFKI 274
           ++  + + P  +P  +        L   Q   F +
Sbjct: 285 QKCAKDVPPKAWPIVMECLYANYYLGFLQRRDFNV 319


>gi|73993621|ref|XP_856645.1| PREDICTED: similar to Farnesyl-diphosphate farnesyltransferase
           (Squalene synthetase) (SQS) (SS) (FPP:FPP
           farnesyltransferase) isoform 4 [Canis familiaris]
          Length = 358

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/209 (8%), Positives = 57/209 (27%), Gaps = 15/209 (7%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +      L           G
Sbjct: 149 KMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASELEDPLVGEDIECANSMG 208

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILG 203
           +      +I         G+ ++P +++ 
Sbjct: 209 LFLQKTNIIRDYLEDQREGREFWPQEVMA 237


>gi|23014239|ref|ZP_00054066.1| COG1562: Phytoene/squalene synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 202

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 58/201 (28%), Gaps = 6/201 (2%)

Query: 100 SVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILD 159
           + E    V   +   ++   ++ A   DS  D   D      Y    ++ +      +  
Sbjct: 2   AEEYRRAVNGDETMIEHASQLLHAFRRDSVRDYCADWADLMEYCRFSAAPVGRFLLDLS- 60

Query: 160 SERYSASLRVIKYAGIAQFIGQLICQLPIHYHR-GQLYFPLDILGAVGLDRESFLSGQNS 218
            E +            A  +   +      YH   ++Y P D + A GL  +      + 
Sbjct: 61  GENHXYPFAPSDALCAALQVLNHLQDCGKDYHELKRVYLPQDWMAAQGLSVDVLAGSSSP 120

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYI-LPDVFP-AFIPVSITESVLKHAQNHGFKIVS 276
             +   I    +     +  A+     +    +   + I V + E +    +      ++
Sbjct: 121 AALRRVIDQTLDATDGLIALAQPLPGLVKDWRMRLQSAITVRVAEQLSAKLRR--GDPLA 178

Query: 277 HSHTPNQLVRPWYMLSSSIKK 297
                ++L      L    + 
Sbjct: 179 ERVKLSKLDYAGVFLVGLWRG 199


>gi|327281749|ref|XP_003225609.1| PREDICTED: squalene synthase-like [Anolis carolinensis]
          Length = 321

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/291 (7%), Positives = 68/291 (23%), Gaps = 18/291 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + +E   S       + L            +        +   Y     L  V D    
Sbjct: 30  PKMDEDPLSESLSLCYKYLHQTGRSFAPVIQILDKDVCHVVCIFYLVLRALDTVEDDMTI 89

Query: 70  PITRDM-RLQWWKDIFE--SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFF 126
            +   +  LQ +               +       +  +I  ++    + + D+      
Sbjct: 90  SLETKIPILQKFHSYLYQPEWRFMGSNDKDKQVLEDFQTISLEFWKLKKVYQDVFADICS 149

Query: 127 DSYN-------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
                        +   K+++ Y +  +       + I    +    +           G
Sbjct: 150 KVGFGLAEFLEKKVESVKEWDKYCYYGTGLAFVGFSQIFSGSKLEDPVIGQDMELVLSLG 209

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLK 234
                  +I         G+ ++P ++              +N ++    +       L 
Sbjct: 210 FFLQKTNIIRDYYEDQLVGREFWPREVWSKYAKKLSDLAKPENINKAVQCMNELIINALH 269

Query: 235 YLFKAREEMRYILPDVFPAFIPVSITESVLKHAQN--HGFKIVSHSHTPNQ 283
           ++      +  +       F  ++   ++        +  ++        +
Sbjct: 270 HVPNILTFLSRVKNQSVFNFYAIAQVMAI-ATLAACCNNPQVFQGVVKIQK 319


>gi|7648565|gb|AAF65581.1|AF139916_2 phytoene synthase [Brevibacterium linens]
          Length = 299

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/297 (8%), Positives = 68/297 (22%), Gaps = 38/297 (12%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-----NPITR 73
                    + +      LA  L  P +R  +  +Y        + D        +   +
Sbjct: 13  TAQQAAKAVISNYSTSFGLATRLLGPSHRHHIRNIYALVRIADEIVDGLAADAGLDTSEQ 72

Query: 74  DMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSI 133
              L+ +     +  +     S +              +          +   D    S 
Sbjct: 73  HEMLENFVAATRAGLRH--GVSDNLIIHSFAQTANATGITGDLIEPFFASMRADLETPSE 130

Query: 134 F-------DCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI------KYAGIAQFIG 180
                   D  +   Y +  +  +  +   +    +     ++       +  G A    
Sbjct: 131 PFAPVRGFDQDEHRAYVYGSAEVVGLMCLKVFLCGQSRTPAQIEELEYGARQLGAAFQNI 190

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
             +  L     R         LG   L  E+ L+          I+         L  A 
Sbjct: 191 NFLRDLADDSLR---------LGRSYLTAETRLTQTEKSAWVTTIRQQ-------LTNAD 234

Query: 241 EEMRYILPD-VFPAFIPVSITESVLKHAQNHGFKIV-SHSHTPNQLVRPWYMLSSSI 295
           + +  +  D         ++  ++     +     +          ++      + +
Sbjct: 235 DTIALLPKDARAAVRSAAALFTALNDKIADIPVDRLYRERVRIPNALKAQLTAKALL 291


>gi|221045454|dbj|BAH14404.1| unnamed protein product [Homo sapiens]
          Length = 353

 Score = 65.5 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/257 (9%), Positives = 72/257 (28%), Gaps = 18/257 (7%)

Query: 46  YRISLSFLYYFHTELMRVRDTARNPITRDMRLQ----------WWKDIFESSTKGLIAES 95
            R ++   Y     L  + D     + + + L            W+ +        + E 
Sbjct: 1   MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 60

Query: 96  ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
               S+E  ++  +Y          +     +  +  +   ++++ Y   ++  +    +
Sbjct: 61  FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120

Query: 156 MILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
            +  +  +   L           G+      +I         G+ ++P ++         
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLG 180

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQ 268
            F   +N D     +       L ++      +  +          IP  +  + L  A 
Sbjct: 181 DFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AAC 239

Query: 269 NHGFKIVSHSHTPNQLV 285
            +  ++   +    +  
Sbjct: 240 YNNQQVFKGAVKIRKGQ 256


>gi|258571688|ref|XP_002544647.1| squalene synthetase [Uncinocarpus reesii 1704]
 gi|237904917|gb|EEP79318.1| squalene synthetase [Uncinocarpus reesii 1704]
          Length = 396

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 74/281 (26%), Gaps = 19/281 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
             ++E+  SR+     R L          C    P   + +   Y     L  + D    
Sbjct: 31  HPRDERKESRNVKECYRFLALTSRSFVAVCQELHPELLMPVVVFYLVLRSLDTIEDDMTI 90

Query: 70  PITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY 129
            I     L     +           S                   Q+   + E    ++ 
Sbjct: 91  GIESKEPLLRNFYMHVGDEGWTFDGSGH------------RQENGQWHGRLRENGKRNAN 138

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMILDSERY------SASLRVIKYAGIAQFIGQLI 183
             S+   K +E Y   ++  +    T +     +      +    +++  G       +I
Sbjct: 139 GLSVNTIKDYELYCHYVAGLVGEGLTRLFVQANFVDPALLTHKPELMESMGQLLQQTNII 198

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
             +   Y   + ++P +       +       QN ++          + L    +  + M
Sbjct: 199 RDIREDYDSKRYFWPKEAWSKYVQNFSDLFLPQNREKALQCSSEIVLMALTRAAQCLQYM 258

Query: 244 RYILPDVFPAFIPVSITESVLK-HAQNHGFKIVSHSHTPNQ 283
             +       F+ +  T ++           +   +   ++
Sbjct: 259 AGVREQSTFNFVAIPQTMAIATLELCFQNPAVFDRNVKLSR 299


>gi|114623536|ref|XP_001140700.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 3
           [Pan troglodytes]
 gi|114623538|ref|XP_001140773.1| PREDICTED: farnesyl-diphosphate farnesyltransferase 1 isoform 4
           [Pan troglodytes]
 gi|221039532|dbj|BAH11529.1| unnamed protein product [Homo sapiens]
 gi|221040242|dbj|BAH14902.1| unnamed protein product [Homo sapiens]
 gi|221045374|dbj|BAH14364.1| unnamed protein product [Homo sapiens]
 gi|221046090|dbj|BAH14722.1| unnamed protein product [Homo sapiens]
          Length = 353

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/257 (9%), Positives = 72/257 (28%), Gaps = 18/257 (7%)

Query: 46  YRISLSFLYYFHTELMRVRDTARNPITRDMRLQ----------WWKDIFESSTKGLIAES 95
            R ++   Y     L  + D     + + + L            W+ +        + E 
Sbjct: 1   MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLED 60

Query: 96  ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
               S+E  ++  +Y          +     +  +  +   ++++ Y   ++  +    +
Sbjct: 61  FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120

Query: 156 MILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
            +  +  +   L           G+      +I         G+ ++P ++         
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLG 180

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQ 268
            F   +N D     +       L ++      +  +          IP  +  + L  A 
Sbjct: 181 DFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AAC 239

Query: 269 NHGFKIVSHSHTPNQLV 285
            +  ++   +    +  
Sbjct: 240 YNNQQVFKGAVKIRKGQ 256


>gi|153864465|ref|ZP_01997359.1| Squalene/phytoene synthase [Beggiatoa sp. SS]
 gi|152146041|gb|EDN72642.1| Squalene/phytoene synthase [Beggiatoa sp. SS]
          Length = 106

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 1/105 (0%)

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP-DVFPA 253
           +Y     L    +   +  + Q SD +   +    +    Y   A + +      +    
Sbjct: 1   MYSLTHELEQFKVSPHTLYNDQLSDSVQALLTFQTKRIRDYNNNAFKYLAKEDRFNQRSG 60

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
            I   I  + L+  +   +++  H      L + W    ++ + R
Sbjct: 61  LIRAQIALATLQEIEKEKYQVFEHRIHLTPLRKLWITWRTNWQAR 105


>gi|71652776|ref|XP_815038.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70880062|gb|EAN93187.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 559

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 58/212 (27%), Gaps = 13/212 (6%)

Query: 73  RDMRLQWWKDIFES-----STKGLIAESISPFSVELLSIVRQYD-LPNQYFLDMIEAHFF 126
             M+L +WK+                    P      ++V Q   L   +     +A   
Sbjct: 286 AGMKLLFWKESVNQIVEKRQMAAGQFTDSHPVLRPFAAVVEQNPHLTKAFIRGFTDARLR 345

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI-CQ 185
                   + KQ   +  R      +    +   +  +A   ++++ G A  + Q     
Sbjct: 346 VLQQ--PGNMKQLFDHFDRYYGYFFNSLLEVTHVKDSTA-EHMLQHIGRAIGLTQHCVML 402

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLS---GQNSDRISLAIKIFAELGLKYLFKAREE 242
              + + G    P D+     ++     +         +   +     +    +  A++ 
Sbjct: 403 WKKYANIGFTMLPADLCADNHVNIALLKNISLASRDRAVRKLLYDVMCITKMEMLHAKQL 462

Query: 243 MRYILPDVFPAFIPVSITESVLKHAQNHGFKI 274
                P  +P  +        L   Q   F +
Sbjct: 463 APSCSPTAWPVVMECVYANYYLGFLQRRDFNV 494


>gi|146103861|ref|XP_001469661.1| hypothetical protein [Leishmania infantum]
 gi|134074031|emb|CAM72772.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322503723|emb|CBZ38809.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 392

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 77/275 (28%), Gaps = 23/275 (8%)

Query: 20  DSLFVLRNLRDIDYDRY-LACLLSP-PLYRISLSFLYYFHTELMRVRDTARNPITRD--- 74
           D + +   LRD D   Y +  +  P    R     L+     L + R +     ++    
Sbjct: 48  DYIKLEDELRDFDLFHYRIGEMAYPDQAMRRDYYALWNLAMSLNKARWSMLEVHSQRGMK 107

Query: 75  -----MRLQWWKD---IFESSTKGLIA--ESISPFSVELLSIVRQYD-LPNQYFLDMIEA 123
                M+L +WK+         K          P      + V +   +   +     +A
Sbjct: 108 TTGAGMKLIFWKESVGAIMEKRKMCTGQFTDSHPVLRPFAAAVERNPHMTKAFVRGFTDA 167

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLI 183
                      + +Q   +  +      +    +   +   A+  ++ + G A  +    
Sbjct: 168 RLRVIQQ--PGNVQQLFDHFDKFYGYFFNSLLEVTHIKD-EATEHLMTHVGRATGLTNHC 224

Query: 184 -CQLPIHYHRGQLYFPLDILGAVGLDRESFLS---GQNSDRISLAIKIFAELGLKYLFKA 239
                 +   G    P D+     ++     +         +   +     +    +  A
Sbjct: 225 VMFWKKYARLGFTMLPADLCADNHVNLGLLKNIPLASRDRAVRKVLFDVMCIVKDEMLHA 284

Query: 240 REEMRYILPDVFPAFIPVSITESVLKHAQNHGFKI 274
           ++  + + P  +P  +        L   Q   F +
Sbjct: 285 QKCAKDVPPKTWPIVMECLYANYYLGFLQRRDFNV 319


>gi|154310568|ref|XP_001554615.1| hypothetical protein BC1G_06758 [Botryotinia fuckeliana B05.10]
 gi|150851298|gb|EDN26491.1| hypothetical protein BC1G_06758 [Botryotinia fuckeliana B05.10]
          Length = 218

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 62/218 (28%), Gaps = 56/218 (25%)

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQ- 194
               E YA    S L++L    L  +  +A   V  + G A  I  ++  LP+       
Sbjct: 1   MDALEMYAENTYSTLMYLTLAALPLQSMAA-DHVASHIGKAAGIAAVLRGLPLIAFPPPP 59

Query: 195 -----------------------LYFPLDILGAVGLDRESFLS-GQNSDRISLAIKIFAE 230
                                  +  PLD++   G+  E  L  G  +  +  AI   A 
Sbjct: 60  NHHSNNAAFGGALGGNAGGQQGAVVLPLDVMAETGVKEEDVLRHGAEAPGLKDAIFTVAT 119

Query: 231 LGLKYLFKAREEMRYILP------------------------------DVFPAFIPVSIT 260
               +L  ARE ++ +                                  F  F+    T
Sbjct: 120 RANDHLITAREMLKNLQAGKDAGHEFEHQGEDGHYYAEDDNTQVSDIERGFGVFMQAVPT 179

Query: 261 ESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKR 298
              L+  +   F +        +   P+    +  +++
Sbjct: 180 RLWLEKLEQLDFDVFRPELRAREWKLPYKAYWAYTRRK 217


>gi|118364555|ref|XP_001015499.1| Squalene and phytoene synthases family protein [Tetrahymena
           thermophila]
 gi|89297266|gb|EAR95254.1| Squalene and phytoene synthases family protein [Tetrahymena
           thermophila SB210]
          Length = 332

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 69/256 (26%), Gaps = 45/256 (17%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-LQWWKDIF 84
             L++     Y+  +      + +++  Y     +  + D    P     R L+    + 
Sbjct: 13  DILKETSRTFYIPIVKLVQGVQEAVASAYLCLRAIDEIEDHPNIPNEVKARMLREVSLVC 72

Query: 85  ESSTKGLIAESISP--------------FSVELLSIVRQYDLPNQYFLD-----MIEAHF 125
            + +    AES++P               S  +   +       +  +      M +   
Sbjct: 73  TTYSAESTAESLTPTYDNEKEYRDRLPEVSARIGEWIMYSPASIRGRIVDATSGMADRMA 132

Query: 126 FDSYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLI 183
             +  +      +  + Y F ++  +  L + I    +       +    G       ++
Sbjct: 133 TWAERNWKCETERDLDAYTFAVAGAVGLLLSDIWAWWDGTKTDRDLAIGFGRGLQSVNIL 192

Query: 184 CQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEM 243
                   RG  ++P                          +        + L  A + +
Sbjct: 193 RNKDEDAERGVTFYPKGWT----------------------VDDMQAYAQRNLQFATKYI 230

Query: 244 RYILPDVFPAFIPVSI 259
           + + P   PA I   I
Sbjct: 231 KDLKPGS-PALIFCRI 245


>gi|58265252|ref|XP_569782.1| farnesyl-diphosphate farnesyltransferase [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134109093|ref|XP_776660.1| hypothetical protein CNBC1530 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259340|gb|EAL22013.1| hypothetical protein CNBC1530 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226014|gb|AAW42475.1| farnesyl-diphosphate farnesyltransferase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 523

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/319 (10%), Positives = 76/319 (23%), Gaps = 32/319 (10%)

Query: 4   KFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           + +T         + R         L                    ++   Y     L  
Sbjct: 63  RDITDTVELPTTHYDRPTMRKCWDFLDLTSRSFARVIRELEGELARTVCLFYLVLRALDT 122

Query: 63  VRDTARNPITRDMRLQW----------WKDIFESSTKGLIAESISPFSVELLSIVRQYDL 112
           V D    P    + L            W          ++ E       E   +  +Y  
Sbjct: 123 VEDDMTIPNDVKIPLLRAMHTKLYEPGWTFKESKEKDKIVLEEFDAIQTEFSLLDHKYQT 182

Query: 113 PNQYFLDMIEAHFFDSY--------NDSIFDCKQFEHYAFRISSRLI-----HLATMILD 159
                   + A   D             I     ++ Y   ++  +        A    +
Sbjct: 183 VIADICKKMGAGMADFAALATPGKPVAEINSIADYDLYCHYVAGLVGEGLSGLFAASGKE 242

Query: 160 SERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD-RESFLSGQNS 218
               +  L +    G+      +   L      G+ ++P  I    G +  +  +  +  
Sbjct: 243 RSFIADQLTLSNSMGLLLQKTNIYRDLHEDVIDGRGFWPRAIWSKYGFNSMKELIDPERE 302

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF----IPVSITESVLKHAQNHGFKI 274
                A        L++   A + +  +       F    IP  +  + L+       KI
Sbjct: 303 TEAMWAASEMVLDALRHATDALDYLTLL--RCQSVFNFVAIPAVMAIATLER-TFMNKKI 359

Query: 275 VSHSHTPNQLVRPWYMLSS 293
           +  +    +      ++ +
Sbjct: 360 LKENVKIRKGETLRLIMRA 378


>gi|328887471|emb|CCA60710.1| phytoene synthase [Streptomyces venezuelae ATCC 10712]
          Length = 303

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 61/234 (26%), Gaps = 12/234 (5%)

Query: 48  ISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIV 107
             +     F  +     D       R   L  W  +   +      +S  P    L+  V
Sbjct: 48  PHVVAAVAFMHDTDDRIDRG-PVDERAAALTEWDGLVRKALAE--GDSALPVLRCLVRTV 104

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL 167
             +     +    +     +    +I D +  E Y    S   + L   +L     +A  
Sbjct: 105 ECHPDVRTHVDAFLRGCEREVAWRTIADEEDLERYVEEYSLPALMLTACLLAPADTAARA 164

Query: 168 RV---IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
                             +  LP     G+   P D +   G D       +    +   
Sbjct: 165 AFTDGCHRLIRGMQRIDFLEDLPEDLRAGRTGVPADAVARHGADLT-----RPDAALGRL 219

Query: 225 IKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESV-LKHAQNHGFKIVSH 277
           ++  A+     L  A        P   P    +   + + L   ++ G  + + 
Sbjct: 220 VQEQADRADVDLTAAASLPDVTAPSYGPFLRALIGVQRLRLDAVRHAGASLATR 273


>gi|327440696|dbj|BAK17061.1| phytoene/squalene synthetase [Solibacillus silvestris StLB046]
          Length = 273

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/263 (9%), Positives = 71/263 (26%), Gaps = 42/263 (15%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD--TARNPITRDMRLQWWKDI 83
           R L++     ++         +++++  Y     +  + D     N +     L+  + +
Sbjct: 12  RVLKETSRTFFIPITFLDKELKLTVASAYLAMRAIDEIEDHEDVSNEMKNATLLKVAELL 71

Query: 84  FESSTKGL--------IAESISPFSVELLSIVR-----QYDLPNQYFLDMIEAHFFD-SY 129
             S             I + +   ++ L   +       + +      +M E        
Sbjct: 72  KASVFDNNAYLDALAPIKDKMPEVTLRLADWLEVCPQGAFSIVTSATSEMAEGMAKWALA 131

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           N  +   +  + Y + ++  +  + + +   S        +    G       ++     
Sbjct: 132 NWQVHTKEDLDDYTYYVAGLVGVMLSELWEWSAGTKTDRELAIGYGRGLQAVNILRNEQE 191

Query: 189 HY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               RG  + P     A                             + L KA   M+ + 
Sbjct: 192 DLDERGVSFVPDGWTRA----------------------ELFAYAEENLAKADLYMKDLD 229

Query: 248 PDV--FPAFIPVSITESVLKHAQ 268
                    +P+++    L+  +
Sbjct: 230 KRSIKLFCRLPLALAHKTLQAMK 252


>gi|310815555|ref|YP_003963519.1| hypothetical protein EIO_1072 [Ketogulonicigenium vulgare Y25]
 gi|308754290|gb|ADO42219.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
          Length = 236

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/275 (18%), Positives = 94/275 (34%), Gaps = 45/275 (16%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              +R+ D DR+ A + +P   R  L  L   + EL R+   + NP+   MRLQWW DI 
Sbjct: 7   AELVREGDADRFAATMAAPVPARAPLFALAALNLELARIGWISDNPLIVAMRLQWWHDIV 66

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           +              ++ L  ++ +   P+     +                    H+  
Sbjct: 67  DGRAA-----PSGDVALALAGLLERGLDPDLLHPMIAARGEQG----------DLMHFLR 111

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +  L  LA     +    A    ++  G+A  I   +   P    +G+ + P  +   
Sbjct: 112 DTAGNLSALAGQATGARDIKA----LQEIGLATGIANWLLAGPALLAKGKTWLPASVS-- 165

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL 264
                               +   A  GL  L +     R +    FPA +       VL
Sbjct: 166 --------------------VGELAGQGLALLDR----RRGLPKSDFPAALWSVHAGPVL 201

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
           + A+ H    ++    P++  R   +L  +++ R+
Sbjct: 202 RRAKTHEADAMAGGLAPSEAARRLSLLWRAMRGRW 236


>gi|32350236|gb|AAP55453.1| phytoene synthase 2 [Zea mays]
          Length = 84

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 4/78 (5%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 220 RISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHS 278
           +    +K   +    +  +A + + ++      P    + +   +L   + + +   +  
Sbjct: 2   KWRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKR 61

Query: 279 HTPNQLVRPWYMLSSSIK 296
               +  +   +  +  +
Sbjct: 62  AYVGKAKKLLSLPLAYAR 79


>gi|251799354|ref|YP_003014085.1| Squalene/phytoene synthase [Paenibacillus sp. JDR-2]
 gi|247546980|gb|ACT03999.1| Squalene/phytoene synthase [Paenibacillus sp. JDR-2]
          Length = 273

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/276 (10%), Positives = 71/276 (25%), Gaps = 47/276 (17%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFES 86
            L+      Y+      P  + ++S  Y     +  V D     +   ++ +      ++
Sbjct: 17  MLKLTSRTFYIPISKLIPELKEAVSSAYLCMRAIDEVEDD--EKLPAPIKKELLLGAAQA 74

Query: 87  STKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI-----------------EAHFFDSY 129
                I ES+          + +  L    +  +                  +   +   
Sbjct: 75  MKSQNIEESLHQVWQPHRDRLPEVTLRMSEWAQLCPAGLAPTVYNYITMMAEQMADWVGT 134

Query: 130 NDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           + +I   +  + Y + ++  +  + + I    +            G       ++     
Sbjct: 135 SWNIRTEEDLDKYTYSVAGMVGEMLSDIWRWYDGTETDREKAIAFGRGLQAVNIMRNRAE 194

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI-- 246
              RG  +FP                           K       + L +A E +  +  
Sbjct: 195 DMERGVDFFPDGW---------DL-------------KDMLRYTRRNLKQADEYLAELKK 232

Query: 247 -LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
                F   IP+S+  + +      G   ++     
Sbjct: 233 GPARSF-CQIPLSLAHATVNLI-AVGGNKLTRDAVL 266


>gi|16332021|ref|NP_442749.1| hypothetical protein sll0513 [Synechocystis sp. PCC 6803]
 gi|1001333|dbj|BAA10820.1| sll0513 [Synechocystis sp. PCC 6803]
          Length = 277

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 67/265 (25%), Gaps = 43/265 (16%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR-------- 76
           L+ L++     Y+   + P     +++  Y     +  V D          R        
Sbjct: 14  LKVLQETSRTFYIPISILPDQLLDAVASAYLCMRAIDEVEDHPDLDAETKARILNQISLN 73

Query: 77  LQWWKDIFESSTKGLIAESISPFSVELLSIVRQY---------DLPNQYFLDMIEAHFFD 127
           LQ   +   S       +       E+   V ++                  M +   F 
Sbjct: 74  LQSATENSHSEDFIRGLDPYRNLLPEVTLRVGEWALLAPESIAPRVWDATAAMSDRMAFW 133

Query: 128 -SYNDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
              N  I    + + Y F ++  +  L + +    +    +       G       ++  
Sbjct: 134 ALQNWQIRTESELDQYTFSVAGAVGLLLSDLWAWHDGTQTNRSHAIGFGRGLQAVNIVRN 193

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 RG  +FP                          +    +     L  A +  + 
Sbjct: 194 YKEDKRRGVSFFPQGWE----------------------LADMHKYARYNLALADQYTKS 231

Query: 246 IL--PDVFPAFIPVSITESVLKHAQ 268
           +   P +    IP+++    L    
Sbjct: 232 LPHGPALNFCKIPLTLAYGTLDVLA 256


>gi|218438865|ref|YP_002377194.1| squalene/phytoene synthase [Cyanothece sp. PCC 7424]
 gi|218171593|gb|ACK70326.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7424]
          Length = 270

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/263 (10%), Positives = 68/263 (25%), Gaps = 43/263 (16%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L++     Y+     P   + +++  Y     +  V D    +  T+   L+      +
Sbjct: 10  ILKETSRTFYIPISRLPDKLQEAVASAYLCMRAIDEVEDHKTLDNFTKARILRQISLNLQ 69

Query: 86  SSTKGLIAE-------SISPFSVELLSIVRQY---------DLPNQYFLDMIEAHFFDSY 129
           ++ +    +       S      E+   + ++                  M +   + + 
Sbjct: 70  AAAENTTVDNFSSGLLSHQDVLPEVTIRLGEWALLAPETIAPRIWDATAAMADRMAYWAE 129

Query: 130 NDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLP 187
           N+  I      + Y F ++  +  L + +    +    +       G       +     
Sbjct: 130 NNWKIETVTDLDRYTFSVAGAVGLLLSDLWGWYDGTQTNRTYAIGFGRGLQAVNIARNHS 189

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               RG  +FP                                     L  A    + + 
Sbjct: 190 EDLRRGVDFFPDGWRAE----------------------EMHAYARHNLKLADYYTKSLP 227

Query: 248 --PDVFPAFIPVSITESVLKHAQ 268
             P +    IP+++    L+   
Sbjct: 228 DGPALDFCKIPLALAYGTLEVLA 250


>gi|58265254|ref|XP_569783.1| farnesyl-diphosphate farnesyltransferase [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134109091|ref|XP_776661.1| hypothetical protein CNBC1530 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259341|gb|EAL22014.1| hypothetical protein CNBC1530 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226015|gb|AAW42476.1| farnesyl-diphosphate farnesyltransferase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 542

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/319 (10%), Positives = 76/319 (23%), Gaps = 32/319 (10%)

Query: 4   KFLTKNTRKEEKIFSRD-SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMR 62
           + +T         + R         L                    ++   Y     L  
Sbjct: 63  RDITDTVELPTTHYDRPTMRKCWDFLDLTSRSFARVIRELEGELARTVCLFYLVLRALDT 122

Query: 63  VRDTARNPITRDMRLQW----------WKDIFESSTKGLIAESISPFSVELLSIVRQYDL 112
           V D    P    + L            W          ++ E       E   +  +Y  
Sbjct: 123 VEDDMTIPNDVKIPLLRAMHTKLYEPGWTFKESKEKDKIVLEEFDAIQTEFSLLDHKYQT 182

Query: 113 PNQYFLDMIEAHFFDSY--------NDSIFDCKQFEHYAFRISSRLI-----HLATMILD 159
                   + A   D             I     ++ Y   ++  +        A    +
Sbjct: 183 VIADICKKMGAGMADFAALATPGKPVAEINSIADYDLYCHYVAGLVGEGLSGLFAASGKE 242

Query: 160 SERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLD-RESFLSGQNS 218
               +  L +    G+      +   L      G+ ++P  I    G +  +  +  +  
Sbjct: 243 RSFIADQLTLSNSMGLLLQKTNIYRDLHEDVIDGRGFWPRAIWSKYGFNSMKELIDPERE 302

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAF----IPVSITESVLKHAQNHGFKI 274
                A        L++   A + +  +       F    IP  +  + L+       KI
Sbjct: 303 TEAMWAASEMVLDALRHATDALDYLTLL--RCQSVFNFVAIPAVMAIATLER-TFMNKKI 359

Query: 275 VSHSHTPNQLVRPWYMLSS 293
           +  +    +      ++ +
Sbjct: 360 LKENVKIRKGETLRLIMRA 378


>gi|329889961|ref|ZP_08268304.1| squalene [Brevundimonas diminuta ATCC 11568]
 gi|328845262|gb|EGF94826.1| squalene [Brevundimonas diminuta ATCC 11568]
          Length = 226

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 64/205 (31%), Gaps = 10/205 (4%)

Query: 26  RNLRDIDYDRYLACLL-SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
             +R  D DR+LA    +    R  L  LY F  EL+ +      P+  +MR  WW +  
Sbjct: 25  AQVRAADLDRWLASRFVADEQARADLIALYAFEAELLAIPTRVTQPLLAEMRYAWWGEQM 84

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E            P    L + V ++ L    F  +IEAH    + +       +     
Sbjct: 85  EGVFTDTP-RVGHPVLEALTATVTRHGLERAPFDALIEAHIGRVHGEPHDLDAFYVGP-- 141

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
                 +  A  IL  E + AS  V          G+            Q+   L +   
Sbjct: 142 ------MQAAVRILAGEGHEASATVAGRLRGLAQTGRTDEAQAARAEANQMLRTLPVAAF 195

Query: 205 VGLDRESFLSGQNSDRISLAIKIFA 229
             +   + +     +        +A
Sbjct: 196 PAVAAATLMRADEPEAFKRLRLFWA 220


>gi|73662412|ref|YP_301193.1| hypothetical protein SSP1103 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494927|dbj|BAE18248.1| hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 284

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/262 (11%), Positives = 68/262 (25%), Gaps = 39/262 (14%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIF 84
           R L++     Y+         + +++  Y     +  + D  A +   +   L    ++F
Sbjct: 24  RVLKETSRTFYIPITFLEKELKHTVASAYLVLRAIDEIEDHEALSNDMKYNTLMQISELF 83

Query: 85  ESSTKGL-------IAESISP-FSVELLSIVRQYDLP------NQYFLDMIEAHFFDSYN 130
           + +             ++  P  ++ L   +                        +   N
Sbjct: 84  KETFDEDKYLQILAPVKNDMPEVTIRLGEWIDACPEHTRAVVLEASSEMAYGMAKWAKAN 143

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMILD-SERYSASLRVIKYAGIAQFIGQLICQLPIH 189
             I      + Y + ++  +  + + + D          +    G       ++      
Sbjct: 144 WDIHTKADLDDYTYYVAGLVGVMLSQLWDLCAGVKTDRDLAIGYGRGLQAVNILRNQHED 203

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           Y    + F  D                             E     L KA   M+ I   
Sbjct: 204 YEERGVSFVPDDWDR---------------------DDLFEYAEDNLAKADAYMKDINKK 242

Query: 250 --VFPAFIPVSITESVLKHAQN 269
             +    +P+++    LK  QN
Sbjct: 243 TILLFCRLPLALAHKSLKAMQN 264


>gi|113475697|ref|YP_721758.1| farnesyl-diphosphate farnesyltransferase [Trichodesmium erythraeum
           IMS101]
 gi|110166745|gb|ABG51285.1| farnesyl-diphosphate farnesyltransferase [Trichodesmium erythraeum
           IMS101]
          Length = 274

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/262 (11%), Positives = 68/262 (25%), Gaps = 43/262 (16%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDT------ARNPITRDMRLQ 78
           L  L++     Y+     P   + +++  Y     +  + D        +  + R + L 
Sbjct: 10  LEILKETSRTFYIPISQLPSGLKEAVASAYLCMRAIDEIEDHRDLDNFTKAKLLRKISLA 69

Query: 79  WWKDIFESSTKGLIAESISPFSV---------ELLSIVRQYDLPNQYFLD--MIEAHFFD 127
             + +  SS      +     S          E   +      P  +     M +   + 
Sbjct: 70  LQEAVDHSSFLNFSEKLDLNISHLPEVTKRVGEWAILASATIAPRIWGETAAMADRMAYW 129

Query: 128 SYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
           + N+  I      + Y F ++  +  L + +    +    +       G       ++  
Sbjct: 130 AENNWTIHTESDLDRYTFSVAGAVGLLLSDLWGWYDNTQTNRTQAIGFGRGLQAVNILRN 189

Query: 186 LPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
                 RG  +FP                                   + L  A      
Sbjct: 190 HSEDLVRGVDFFPYGWSAKN----------------------MQAYAQRNLLLADSYTNS 227

Query: 246 IL--PDVFPAFIPVSITESVLK 265
           +   P      IP+++  + L 
Sbjct: 228 LPSGPARNFCQIPLTLAHATLD 249


>gi|313202619|ref|YP_004041276.1| hypothetical protein Palpr_0129 [Paludibacter propionicigenes WB4]
 gi|312441935|gb|ADQ78291.1| hypothetical protein Palpr_0129 [Paludibacter propionicigenes WB4]
          Length = 315

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 20/251 (7%)

Query: 37  LACLLSPPLYRISLSFLYYFHTELMRVRDTARN--PITRDMRLQWWKDIFESSTKGLIAE 94
           +A          +    Y F   +  + D  +       +     ++    +    +++ 
Sbjct: 24  IAARFWDEERYQAAKVCYKFMRAIDDLIDNYKTEHKTIANEDKAQFEREVNTWINTIVSA 83

Query: 95  SISPFSV-ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRI----SSR 149
           S +  +  E++  V+++ +P        ++  +D YND     + +  YA       +S 
Sbjct: 84  SENCLTQNEIIQTVQRFHIPAWPLEAFAKSMIYDVYNDGFPTLQHYLDYASGASVAPASI 143

Query: 150 LIHLATMILDSERYSASLRVIKYAGIAQFI----GQLICQLPIHYHRGQLYFPLDILGAV 205
            +HL  +  ++  Y A    +K A     +      +I      +     YFP D++   
Sbjct: 144 FVHLCGLKKENNEYIAPKFDVKQAATPCAVFSYVVHIIRDFVKDHTHNLNYFPDDLMAKN 203

Query: 206 GLDRESFLS----GQNSDRISLAIKIFAELGLKYLFKAREEMRYI-----LPDVFPAFIP 256
           GL+RE+ L+     + +      I+    +   Y  K  E M+ I             I 
Sbjct: 204 GLNRENLLAMAQGAEITSGFREMIRELYAVADNYRQKTYEVMQSIKPQLEPRSQLSLEII 263

Query: 257 VSITESVLKHA 267
            S+   V +  
Sbjct: 264 FSLYLMVFERI 274


>gi|46204654|ref|ZP_00049670.2| COG1562: Phytoene/squalene synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 206

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 42/148 (28%), Gaps = 8/148 (5%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFESST 88
             D +  +A  L  P  R ++   Y +      V D    +P  +   L    D      
Sbjct: 17  QHDENFPVASHLIHPRNRGAILAFYNYVRAGDDVADHMGLSPERKIEMLDALADALTGKG 76

Query: 89  KGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISS 148
                    P    L   +  +  P  + L++++A   D+      +  +  HY    + 
Sbjct: 77  GF------DPSVEPLKRELAAHGQPPTHALELLDAFRMDARKSRYENWDELIHYCRYSAM 130

Query: 149 RLIHLATMILDSERYSASLRVIKYAGIA 176
            +      I   +  +           A
Sbjct: 131 PVGRFVLDIHGEDP-ARVYPTSDAICAA 157


>gi|299535135|ref|ZP_07048460.1| hypothetical protein BFZC1_03893 [Lysinibacillus fusiformis ZC1]
 gi|298729452|gb|EFI70002.1| hypothetical protein BFZC1_03893 [Lysinibacillus fusiformis ZC1]
          Length = 273

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/269 (10%), Positives = 66/269 (24%), Gaps = 45/269 (16%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
               ++ L+D     Y+         +IS++  Y     +  + D     ++ D++    
Sbjct: 8   YKEAMQVLKDTSRTFYIPITFLKNDLKISVAAAYLAMRAIDEIED--HEELSNDVKFDLL 65

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS------------ 128
               E        E+           + +  L    +L                      
Sbjct: 66  SATSELLKDNFNNEAYQSLLAPYAEQLPEVSLRLADWLSFCPEESRKIVQASTSEMAFGM 125

Query: 129 -----YNDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQL 182
                 N  +   +  + Y + ++  +  + + +            +    G       +
Sbjct: 126 AKWAKANWQVRTREDLDDYTYYVAGLVGTMLSELWAWGAGVQTDRELAIGYGRGLQAVNI 185

Query: 183 ICQLPIHY-HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKARE 241
           +         RG  + P     A                             + L KA  
Sbjct: 186 LRNQHEDLDERGVSFVPEGWTRA----------------------DLFAYAEENLAKADL 223

Query: 242 EMRYILPD--VFPAFIPVSITESVLKHAQ 268
            M+ I     +    +P+++    LK  Q
Sbjct: 224 YMKDINKRTILLFCRLPLALAHKTLKAMQ 252


>gi|302383722|ref|YP_003819545.1| squalene/phytoene synthase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194350|gb|ADL01922.1| Squalene/phytoene synthase [Brevundimonas subvibrioides ATCC 15264]
          Length = 209

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 2/110 (1%)

Query: 26  RNLRDIDYDRYLACLLS-PPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
             +R  D DR+L+      P  R  L  LY F  ELM +      P+  +MR  WW++  
Sbjct: 8   AQVRAADPDRWLSSRFVSDPQARADLIALYAFEAELMAIPTRVTQPLLAEMRYAWWREQL 67

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIF 134
           +    G   +   P    +  +V ++ L    F  +I+AH    + D   
Sbjct: 68  DGVWAGSARK-GHPVLEAMTDLVGRHGLDRAPFYALIKAHIGRVHGDPHD 116


>gi|89097372|ref|ZP_01170261.1| hypothetical protein B14911_27275 [Bacillus sp. NRRL B-14911]
 gi|89087668|gb|EAR66780.1| hypothetical protein B14911_27275 [Bacillus sp. NRRL B-14911]
          Length = 288

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/260 (10%), Positives = 67/260 (25%), Gaps = 40/260 (15%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIF 84
             L++      +      P  + ++S  Y     +  + D       ++D  L+   ++ 
Sbjct: 29  EMLKETSRTFLIPISYLSPGLKETVSSAYLCMRAIDEIEDHPELEAESKDHLLRSISELL 88

Query: 85  ESSTK-------GLIAESISP-FSVELLSIVRQYDLPNQ------YFLDMIEAHFFDSYN 130
           +               +S  P  ++ L   +R      +                +    
Sbjct: 89  KKPVNAEDMKSLFKPYKSKLPEVTLRLYDWIRLCPASIKEKVLDSTSTMAKGMADWTMKG 148

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
            +I D K  + Y F ++  +  + + I    +       +    G       ++      
Sbjct: 149 WNIRDEKDLDDYTFYVAGLVGVMLSDIWKWHDNTETKKDLAIAFGRGLQSVNILRNKIED 208

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG  ++P                                   + L  A   ++ I   
Sbjct: 209 KERGVSFYPDGW----------------------DNDQMFSYARRNLALADAYIKDIKSA 246

Query: 250 --VFPAFIPVSITESVLKHA 267
             +    IP+++    L   
Sbjct: 247 PILNFCRIPLALAHGTLSAL 266


>gi|328353452|emb|CCA39850.1| farnesyl-diphosphate farnesyltransferase [Pichia pastoris CBS 7435]
          Length = 374

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 78/271 (28%), Gaps = 29/271 (10%)

Query: 54  YYFHTELMRVRDTAR-NPITRDMRLQWWKDIF----ESSTKGLIAESISPFSVELLSIVR 108
           Y     L  V D     P  +   L+ + +       S       E      V+   ++ 
Sbjct: 4   YLVLRALDTVEDDMTIKPDIKIPLLRSFDEKLNLKSWSFDGNSPDEKDRQVLVDFTDVLE 63

Query: 109 QYDLPNQYFLDMIEAHFFDSYNDS-------------IFDCKQFEHYAFRISSRLIHLAT 155
           +Y      + D+I+       N               +   K ++ Y   ++  +    T
Sbjct: 64  EYHRLKPVYQDVIKDITHKMGNGMADYITDEEFNLNGVATVKDYDLYCHYVAGLVGEGLT 123

Query: 156 MI-----LDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRE 210
            +         +   ++++ +  G+      +I         G+ ++P +I         
Sbjct: 124 HLIVEAGFGDPKLEDNMQLSESMGLFLQKTNIIRDYREDLDDGRSFWPKEIWSKYADSLS 183

Query: 211 SFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKHAQ 268
            F   +N ++    I       + ++      +  +          IP  +  + L    
Sbjct: 184 DFSKRENYEKGLDCISELVLNTMDHIKDVLVYLSSVYDFSSYNFCVIPQVMAIATLATVF 243

Query: 269 NHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
            +  K+   +    +    + +L +   + F
Sbjct: 244 RNE-KVFETNVKIRKGTTCYLILKA---RTF 270


>gi|254418917|ref|ZP_05032641.1| hypothetical protein BBAL3_1227 [Brevundimonas sp. BAL3]
 gi|196185094|gb|EDX80070.1| hypothetical protein BBAL3_1227 [Brevundimonas sp. BAL3]
          Length = 217

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 2/127 (1%)

Query: 26  RNLRDIDYDRYLACLL-SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
             +R  D DR+L+  L +    R  L  LY F  ELM +      P+  +MR  WW +  
Sbjct: 16  AQVRAADLDRWLSTRLVADARARADLITLYAFEAELMSIPARVTQPLLAEMRYTWWAEQL 75

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           +    G+  +   P    L  +V ++ L       +IEAH    + +       +     
Sbjct: 76  DGVFAGIPRK-GHPVLEALTDLVVRHALDRAPLDALIEAHIGRVHGEPHDLDAFYVGPMQ 134

Query: 145 RISSRLI 151
                L 
Sbjct: 135 AAVQVLA 141


>gi|114799019|ref|YP_759426.1| hypothetical protein HNE_0697 [Hyphomonas neptunium ATCC 15444]
 gi|114739193|gb|ABI77318.1| conserved domain protein [Hyphomonas neptunium ATCC 15444]
          Length = 219

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 1/100 (1%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFE 85
           + +R +D DR+++   +P   R +L  LY    EL+RVR+         +R QWW++  E
Sbjct: 21  KRVRRVDEDRWISSRFAPAAERRALVALYALAYELVRVREAVSEETLGLIRFQWWREAIE 80

Query: 86  SSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF 125
               G  A       + +   V    L       +++ + 
Sbjct: 81  EIEAGK-APRGHDVCLAIAEEVVAGRLKPGALQKLVDGYQ 119


>gi|32350272|gb|AAP55471.1| phytoene synthase 2 [Zea mays]
          Length = 82

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 4/77 (5%), Positives = 24/77 (31%), Gaps = 1/77 (1%)

Query: 221 ISLAIKIFAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSH 279
               +K   +    +  +A + + ++      P    + +   +L   + + +   +   
Sbjct: 1   WRRFMKGQIQRARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRA 60

Query: 280 TPNQLVRPWYMLSSSIK 296
              +  +   +  +  +
Sbjct: 61  YVGKAKKLLSLPLAYAR 77


>gi|321254438|ref|XP_003193072.1| farnesyl-diphosphate farnesyltransferase [Cryptococcus gattii
           WM276]
 gi|317459541|gb|ADV21285.1| farnesyl-diphosphate farnesyltransferase, putative [Cryptococcus
           gattii WM276]
          Length = 509

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 67/301 (22%), Gaps = 31/301 (10%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQW 79
                  L                     +   Y     L  V D    P   +   L+ 
Sbjct: 48  MRKCWDFLDLTSRSFARVIRELEGELARIVCLFYLVLRALDTVEDDMTIPNDVKLPLLRA 107

Query: 80  WKDIFESSTKGLIA---------ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY- 129
                                  E       E   +  +Y          + A   D   
Sbjct: 108 LHTKLYEPGWTFKGSKEKDKIVLEEFDAIQTEFSLLDPKYQSVIADICKKMGAGMADFAA 167

Query: 130 -------NDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGIAQ 177
                     I     ++ Y   ++  +        A    +    +  L +    G+  
Sbjct: 168 LATPEQPVAEINSIADYDLYCHYVAGLVGEGLSGLFAASGKERSFIADQLTLSNSMGLLL 227

Query: 178 FIGQLICQLPIHYHRGQLYFPLDILGAVGLD-RESFLSGQNSDRISLAIKIFAELGLKYL 236
               +   L      G+ ++P  I    G +  +  +  +       A        L++ 
Sbjct: 228 QKTNIYRDLHEDVIDGRGFWPRAIWSKYGFNSMKELIDPERETEAMWAASEMVLDALRHA 287

Query: 237 FKAREEMRYILPDVFPAF----IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
             A + M  +       F    IP  +  + L+       KI   +    +      ++ 
Sbjct: 288 TDALDYMTLL--KCQSVFNFVAIPAVMAIATLER-TFMNKKIFKENVKIRKGETLRLIMR 344

Query: 293 S 293
           +
Sbjct: 345 A 345


>gi|168007955|ref|XP_001756673.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692269|gb|EDQ78627.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 406

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 68/283 (24%), Gaps = 18/283 (6%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMR 76
             +  F  + LR +     +  L   P  R ++   Y     L  V D    P   +   
Sbjct: 34  DPNLAFCYQMLRRVSGSFSIVILQLEPGLRNAVCVFYLVLRGLQAVEDDLTIPYDLKVEL 93

Query: 77  LQWWKDIFESSTKGLIAESISP---------FSVELLSIVRQYDLPNQYFLDMIEAHFFD 127
           L+                +              +  L +   Y        + +      
Sbjct: 94  LRNLHKKIFDRDFHFPCGNNDYKLLMDKFYLVILAFLGLTTGYQEVITEITERMGEGMVK 153

Query: 128 SYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVI--KYAGIAQFIGQLICQ 185
             N  I   + +  Y    +  +    T I  +               G+      +I  
Sbjct: 154 YLNTEIISREDYNEYCHFSAGLMGLGLTRIFYTAGMEQFTPDYLSNAMGLFLQKTNVIRD 213

Query: 186 LPIHYHRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREE 242
              + +      L +P ++        E+F+   N  +    +       L +       
Sbjct: 214 YLENINAQPTSRLRWPKEVWSKYADKPEAFMDETNYKQGLHCLNEMVTDALSHGLDCLHY 273

Query: 243 MRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           M  +   P++             L     +  ++   S    +
Sbjct: 274 MAALQDQPNLRFCATFQITALGTL-AMCYNNVEVFRGSVRMRR 315


>gi|28403302|gb|AAO39835.1| phytoene synthase [Citrus sinensis]
          Length = 109

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 3/96 (3%)

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + D           L  W+   E   +             L   V ++ +  Q F DMIE
Sbjct: 1   LVDGPNASHITPTALDRWESRLEDLFR---GRPFDMLDAALSDTVTKFPVDIQPFRDMIE 57

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
               D       +  +   Y + ++  +  ++  ++
Sbjct: 58  GMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVM 93


>gi|1389893|gb|AAB02945.1| squalene synthase [Nicotiana tabacum]
          Length = 376

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/273 (9%), Positives = 60/273 (21%), Gaps = 43/273 (15%)

Query: 23  FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL----- 77
           F    L  +     L     P   R ++   Y     L  V D    P    + +     
Sbjct: 39  FCYSMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFH 98

Query: 78  -----QWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS 132
                + W     +    ++ +     S   L + + Y    +     + A         
Sbjct: 99  QHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKE 158

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR 192
           +     ++ Y   ++  +    + +                                   
Sbjct: 159 VETTDDYDEYCHYVAGLVGLGLSKLFH------------------------ASGKEDLAS 194

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDV 250
             L        ++GL  +      NS +    +       L ++      M  +      
Sbjct: 195 DSLS------NSMGLFLQELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIF 248

Query: 251 FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
               IP  +    L        ++        +
Sbjct: 249 RFCAIPQVMAIGTL-AMCYDNIEVFRGVVKMRR 280


>gi|126657162|ref|ZP_01728328.1| hypothetical protein CY0110_24576 [Cyanothece sp. CCY0110]
 gi|126621433|gb|EAZ92144.1| hypothetical protein CY0110_24576 [Cyanothece sp. CCY0110]
          Length = 270

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 55/196 (28%), Gaps = 19/196 (9%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           L+ LR+     Y+     P   + +++  Y     +  V D    +  T+   L+     
Sbjct: 8   LKTLRETSRTFYIPISRLPGDLQDAVASAYLCMRAIDEVEDHPDLDNFTKGKILRQMSLN 67

Query: 84  FESSTKGLIAESISPFSVELLSIVRQ----------------YDLPNQYFLDMIEAHFFD 127
            +++ +    E  S   V     +                            M +   + 
Sbjct: 68  LQAAVEMSRIEDFSVGLVPYSHCLPDVSLRLGQWAMLAPPTIAPRVWDATASMADRMAYW 127

Query: 128 SYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
           + N+  I      + Y F ++  +  L + +    +    + +     G       ++  
Sbjct: 128 AENNWTIRTKAHLDQYTFSVAGAVGLLLSDLWAWYDGTQTNRQYAIGFGRGLQAVNIVRN 187

Query: 186 LPIHYHRGQLYFPLDI 201
                 RG  + P   
Sbjct: 188 HREDLRRGVNFIPQGW 203


>gi|163791372|ref|ZP_02185783.1| hypothetical protein CAT7_10480 [Carnobacterium sp. AT7]
 gi|159873342|gb|EDP67435.1| hypothetical protein CAT7_10480 [Carnobacterium sp. AT7]
          Length = 276

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/262 (9%), Positives = 62/262 (23%), Gaps = 39/262 (14%)

Query: 26  RNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR----DMRLQWWK 81
           R L++     Y+         + S++  Y     +  + D      T      M+L    
Sbjct: 12  RVLKETSRTFYIPITFLKADLKYSVASAYLVLRAIDEIEDHESIQNTTKFDLLMQLSELF 71

Query: 82  DI----FESSTKGLIAESISP-FSVELLSIVRQYD------LPNQYFLDMIEAHFFDSYN 130
                  E        +   P  S+ L+  ++         +             +   N
Sbjct: 72  KRPFTQEEYCDIIAPVKEQLPEVSIRLVDWIQACPEGSRSLMMETASEMAFGMAKWAKEN 131

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
             +   +  + Y + ++  +    + +   S     +  +    G    I  ++      
Sbjct: 132 WQVHTKEDLDDYTYYVAGCVGVYLSKLWNWSYGQETNEELAIEFGRGLQIVNILRNQKED 191

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
                + F  D                                 + L +A   +  +   
Sbjct: 192 KEERSVSFVPDDWSR---------------------DQLFAYADENLAQADAYIETLNEK 230

Query: 250 V--FPAFIPVSITESVLKHAQN 269
                  +P++     L   + 
Sbjct: 231 STILFCRLPLAFAHKSLAAMKK 252


>gi|284929275|ref|YP_003421797.1| farnesyl-diphosphate farnesyltransferase [cyanobacterium UCYN-A]
 gi|284809719|gb|ADB95416.1| farnesyl-diphosphate farnesyltransferase [cyanobacterium UCYN-A]
          Length = 270

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/217 (10%), Positives = 53/217 (24%), Gaps = 26/217 (11%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFES 86
           L++     Y+     P   R +++  Y     +  V D        +   L+      ++
Sbjct: 11  LKETSRTFYIPISRLPDNLREAVASAYLCMRAIDEVEDHPDIENFIKAKILRQMSLNLQA 70

Query: 87  STKGLIAESISPFSVELLSIVRQ----------------YDLPNQYFLDMIEAHFFDSYN 130
             +    +  S       +I+                            M +   + + N
Sbjct: 71  VNEKSGIKDFSADLAPYENILPDVSLQLGKWALLAPNTIAPRIWDATAAMADRMAYWTEN 130

Query: 131 DS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           +  I        Y F ++  +  L + +    +    S +     G       +I     
Sbjct: 131 NWTIRTEAHLNQYTFSVAGAVGILLSDLWSWHDGTQTSRQYAIGFGRGLQAVNIIRNHRE 190

Query: 189 HYHRGQLYFPLDI-------LGAVGLDRESFLSGQNS 218
             +RG  + P               L      +    
Sbjct: 191 DLNRGVSFIPQGWHIKDVYKYARYNLTLADLYTKSLD 227


>gi|317453455|emb|CBY78072.1| truncated phytoene synthase/carotene cyclase [Neurospora crassa]
          Length = 505

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 2/93 (2%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 269 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
            D A++               +   K   A   
Sbjct: 327 VDDAKSRREVLSWTAKLNHFLDLHYKDADATED 359


>gi|317453457|emb|CBY78073.1| truncated phytoene synthase/carotene cyclase [Neurospora crassa]
          Length = 505

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 2/93 (2%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 269 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 326

Query: 64  RDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
            D A++               +   K   A   
Sbjct: 327 VDDAKSRREVLSWTAKLNHFLDLHYKDADATED 359


>gi|172036758|ref|YP_001803259.1| putative terpenoid synthase [Cyanothece sp. ATCC 51142]
 gi|171698212|gb|ACB51193.1| putative terpenoid synthase [Cyanothece sp. ATCC 51142]
          Length = 273

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 55/196 (28%), Gaps = 19/196 (9%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           L+ LRD     Y+     P   + +++  Y     +  V D    +  T+   L+     
Sbjct: 11  LKTLRDTSRTFYIPISRLPGGLQDAVASAYLCMRAIDEVEDHPDLDNFTKGKILRQMSLN 70

Query: 84  FESSTKGLIAESISPFSVELLSIVRQ----------------YDLPNQYFLDMIEAHFFD 127
            +++ +    E  S   V     +                            M +   + 
Sbjct: 71  LQAAVEMSGIEDFSVGLVPYSHCLPDVSLRLGQWAMLAPETIAPRVWDATASMADRMAYW 130

Query: 128 SYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
           + N+  I      + Y F ++  +  L + +    +    + +     G       ++  
Sbjct: 131 AENNWTIRTKAHLDQYTFSVAGAVGLLLSDLWAWYDGTQTNRQYAIGFGRGLQAVNIVRN 190

Query: 186 LPIHYHRGQLYFPLDI 201
                 RG  + P   
Sbjct: 191 HREDLRRGVNFIPQGW 206


>gi|67923757|ref|ZP_00517221.1| Squalene/phytoene synthase [Crocosphaera watsonii WH 8501]
 gi|67854384|gb|EAM49679.1| Squalene/phytoene synthase [Crocosphaera watsonii WH 8501]
          Length = 270

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 56/214 (26%), Gaps = 26/214 (12%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           L+ LR+     Y+     P   + +++  Y     +  V D    +  T+   L+     
Sbjct: 8   LKTLRETSRTFYIPISRLPGGLQDAVASAYLCMRAIDEVEDHPDLDNFTKGKILRQMSLN 67

Query: 84  FESSTKGLIAESISPFSVELLSIVRQ----------------YDLPNQYFLDMIEAHFFD 127
            +++ +    E  S   V     +                            M +   + 
Sbjct: 68  LQAAVEKSGIEDFSAGLVPYSHCLPDVSLRLGQWAVLAPDTIAPRVWDATASMADRMAYW 127

Query: 128 SYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
           + N+  I      + Y F ++  +  L + +    +    + +     G       ++  
Sbjct: 128 AENNWTIRTKAHLDQYTFSVAGSVGLLLSDLWAWYDGTQTNRQQAIGFGRGLQAVNIVRN 187

Query: 186 LPIHYHRGQLYFPLDI-------LGAVGLDRESF 212
                 RG  + P               L     
Sbjct: 188 HREDLRRGVNFIPQGWKIEDVHEYARHNLKLADL 221


>gi|218245378|ref|YP_002370749.1| Squalene/phytoene synthase [Cyanothece sp. PCC 8801]
 gi|257058414|ref|YP_003136302.1| Squalene/phytoene synthase [Cyanothece sp. PCC 8802]
 gi|218165856|gb|ACK64593.1| Squalene/phytoene synthase [Cyanothece sp. PCC 8801]
 gi|256588580|gb|ACU99466.1| Squalene/phytoene synthase [Cyanothece sp. PCC 8802]
          Length = 270

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 57/199 (28%), Gaps = 19/199 (9%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           L+ L++     Y+     P   + +++  Y     +  V D    +  T+   L+     
Sbjct: 8   LKILKETSRTFYIPISRLPDRLQEAVASAYLCMRAIDEVEDHPDLDNFTKAQLLRRMSLN 67

Query: 84  FESSTKGLIAE-------SISPFSVELLSIVRQY---------DLPNQYFLDMIEAHFFD 127
            ++ ++    E         +    ++   V ++                  M +   + 
Sbjct: 68  LQAGSEKARVEDFSAGLMPYNACLPDVTLRVGEWALLAPDSIAPRIWDATAAMADRMAYW 127

Query: 128 SYNDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
           + N+  I      + Y F ++  +  L + +    +    +       G       ++  
Sbjct: 128 AENNWTIRTEAHLDQYTFSVAGAVGLLLSDLWAWYDGTQTNRSYAIGFGRGLQAVNIVRN 187

Query: 186 LPIHYHRGQLYFPLDILGA 204
                 RG  + P      
Sbjct: 188 HREDLRRGVNFLPQGWNEQ 206


>gi|189026973|emb|CAQ55982.1| squalene synthase [Aphanomyces euteiches]
          Length = 326

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/154 (9%), Positives = 44/154 (28%), Gaps = 8/154 (5%)

Query: 137 KQFEHYAFRISSRLIHLATMILDSERYSASLRVI-----KYAGIAQFIGQLICQLPIHYH 191
             ++ Y + ++  +    + +  +    +             G       +I      + 
Sbjct: 83  ADYDKYCYYVAGLVGEGLSRLFSASGLESPSVGKLTGLSISMGSFLQKVNIIRDYLEDFV 142

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPD 249
            G+ ++P +I      +          +     +       L+++    E +  I     
Sbjct: 143 EGRTFWPQEIWKKHMGNLGDMRDPAKEEASLACLNEMVFDALRHIPDCMEYLGGIHHPDV 202

Query: 250 VFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            F   +P  +  + L    N+  K+ +      +
Sbjct: 203 FFFCAMPQVMAVATLAKLYNNP-KVFTGVVKVRK 235


>gi|331252034|ref|XP_003338592.1| hypothetical protein PGTG_20056 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309317582|gb|EFP94173.1| hypothetical protein PGTG_20056 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 415

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 86/269 (31%), Gaps = 33/269 (12%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN---PITRDMR 76
                L +L+  D +  L     P   +     +  FH E+  + +       P+   MR
Sbjct: 40  SIEECLDSLKRNDPESVLQLPFWPKESQPGFVAIKSFHGEINNIPNAVSRSQKPLIAQMR 99

Query: 77  LQWWKDIFESSTKGLIA-------------ESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
            QWW+D  +S      +              S  P    L  I++Q+ L   YF  +I A
Sbjct: 100 YQWWRDAIDSCYLSSSSSSQTVDNSPINQIPSNHPLIHLLKPIIKQHKLSKYYFARIINA 159

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS-------------ASLRVI 170
                 +  +        ++   +   + L   +L S +                    +
Sbjct: 160 SETHYLDRRLPTLTALADHSRSTTYASLSLLAQLLTSSKQWKENGTKLGGVTLATVDHSL 219

Query: 171 KYAGIAQFIGQLICQLPIHYH-RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
            +  +   + +++ QLP     RG    PL++L       E+     N  R     +  A
Sbjct: 220 SHLALFLTVVRILKQLPYDIRHRGTHSVPLELLE---CSEETLFRFFNPRRTYNNHQSLA 276

Query: 230 ELGLKYLFKAREEMRYILPDVFPAFIPVS 258
               K L  A++ +  ++   +   +   
Sbjct: 277 SSDQKDLHDAQDSLFNLIFLAWSELVAAR 305


>gi|62319635|dbj|BAD95130.1| phytoene synthase [Arabidopsis thaliana]
          Length = 83

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 4/70 (5%), Positives = 23/70 (32%), Gaps = 1/70 (1%)

Query: 228 FAELGLKYLFKAREEMRYILPDVF-PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVR 286
             +    +  +A + +  +      P +  + +   +L   + + +   +      ++ +
Sbjct: 2   QLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKK 61

Query: 287 PWYMLSSSIK 296
              +  +  K
Sbjct: 62  IAALPLAYAK 71


>gi|258542818|ref|YP_003188251.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633896|dbj|BAH99871.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636955|dbj|BAI02924.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640008|dbj|BAI05970.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643064|dbj|BAI09019.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646119|dbj|BAI12067.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649172|dbj|BAI15113.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652159|dbj|BAI18093.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655216|dbj|BAI21143.1| phytoene/squalene synthase [Acetobacter pasteurianus IFO 3283-12]
          Length = 284

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 79/242 (32%), Gaps = 39/242 (16%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV-----RDTARNPITRDMRLQWWKDIF 84
             D DR L     P   R +   L  FH EL+R             +   +RLQWW+++ 
Sbjct: 39  QADPDRALCLWFLPSSVRDAAYVLLAFHNELIRALAPARSAAVAGSMAGYIRLQWWREVL 98

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E+       +     +  ++++V+   +  +  L MI A   +       D +++     
Sbjct: 99  EAQ-----RKPEHVLAPAIMALVQSGQVQRETCLKMITAREMELEPT--QDVERWMQMMR 151

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +      A   L   + +  L+ +   G A   G ++   P+    G+  FP      
Sbjct: 152 DGAGA-FQQAIGELLGVQDAVILQRLAAGGAAYGAGTMLRHWPLLAGSGRFLFPGMQ--- 207

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL 264
                         +++    K F +             + + P    A +P  + +  L
Sbjct: 208 --------------EQLRQVGKTFLQECH---------FKALEPRCRKAALPAVLAKRDL 244

Query: 265 KH 266
             
Sbjct: 245 AR 246


>gi|307150029|ref|YP_003885413.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7822]
 gi|306980257|gb|ADN12138.1| Squalene/phytoene synthase [Cyanothece sp. PCC 7822]
          Length = 270

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/263 (9%), Positives = 67/263 (25%), Gaps = 43/263 (16%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L++     Y+     P   + +++  Y     +  V D +  +  T+   L+      +
Sbjct: 10  VLKETSRTFYIPISRLPDQLQEAVASAYLCMRAIDEVEDHSALDNFTKARILRQISLNLQ 69

Query: 86  SSTKGLIAESISPFSVELLSIVRQ----------------YDLPNQYFLDMIEAHFFDSY 129
           ++ +    +  S        ++ +                          M +   + + 
Sbjct: 70  AAVENSTVDKFSVGLHSYQDVLPEVTLRLGEWVLLAPDTIAPRIWDATAAMADRMAYWAD 129

Query: 130 NDS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLP 187
           N+  I      + Y F ++  +  L   +    +    +       G       +     
Sbjct: 130 NNWKITTESDLDRYTFSVAGAVGLLLCDLWAWYDGTQTNRTHAIGFGRGLQAVNIARNHS 189

Query: 188 IHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL 247
               RG  +FP                                   + L  A    + + 
Sbjct: 190 EDLRRGVDFFPSGWRAE----------------------DIHAYARRNLKLADYYTKSLP 227

Query: 248 --PDVFPAFIPVSITESVLKHAQ 268
             P +    IP+++    L+   
Sbjct: 228 HGPALDFCKIPLALAYGTLEVLA 250


>gi|71020581|ref|XP_760521.1| farnesyl-diphosphate farnesyltransferase [Ustilago maydis 521]
 gi|119370493|sp|Q92459|FDFT_USTMA RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName:
           Full=FPP:FPP farnesyltransferase; AltName:
           Full=Farnesyl-diphosphate farnesyltransferase
 gi|46100416|gb|EAK85649.1| FDFT_USTMA Farnesyl-diphosphate farnesyltransferase (Squalene
           synthetase) (SQS) (SS) (FPP:FPP farnesyltransferase)
           [Ustilago maydis 521]
          Length = 572

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 73/312 (23%), Gaps = 43/312 (13%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-----Q 78
               L                     +   Y     L  V D    P  R + L     +
Sbjct: 50  CWGFLDLTSRSFAAVIKELKGELSRVICLFYLVLRALDTVEDDMTIPAQRKIPLLVNFYK 109

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS------ 132
           + +    + T+    E      VE   ++ +Y L +  +  +I                 
Sbjct: 110 YLEQPGWNFTESGPNEKDRQLLVEFDKVIAEYQLLDVGYKTVISDITAKMGAGMASYIEL 169

Query: 133 -------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIG 180
                  +   K F+ Y   ++  +    + +    +        +     + G+     
Sbjct: 170 SAKGPLKVAMWKHFDLYCHFVAGLVGEGLSRLFSESKLERPWLGHQLELSNHMGLFLQKT 229

Query: 181 QLICQLPIHYHRGQLYFPLD----ILGAVGLDRE------SFLSGQNSDRISLAIKI--- 227
            +I         G+ ++P               +          G      +   +    
Sbjct: 230 NIIRDYAEDCEEGRYFWPQQCWGDDFAKFESQPDVAKGIIEIKPGHFRPADNELGQRSMY 289

Query: 228 ----FAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
                    + +   A + +  +          IP  +  + L     +   +   +   
Sbjct: 290 VLSSMLLDAMSHATHALDYLALLKEQSVFNFCAIPQVMAIATL-ELMFNNPDVFKKNVKI 348

Query: 282 NQLVRPWYMLSS 293
            + V    +L +
Sbjct: 349 RKGVAVGLILRA 360


>gi|166366096|ref|YP_001658369.1| squalene/phytoene synthase [Microcystis aeruginosa NIES-843]
 gi|166088469|dbj|BAG03177.1| squalene/phytoene synthase [Microcystis aeruginosa NIES-843]
          Length = 269

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/262 (10%), Positives = 68/262 (25%), Gaps = 42/262 (16%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L++     Y+     P     +++  Y     +  V D    +  ++   L+      +
Sbjct: 10  ILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKSQILRQISLNLQ 69

Query: 86  SSTKGLIAES------ISPFSVELLSIVRQY---------DLPNQYFLDMIEAHFFDSYN 130
           + T+    E             E+   + ++                  M +   + + N
Sbjct: 70  AGTENSTKEDFAFGLVHREILPEVTLRIGEWALLAPDSIAPRVWDATAAMADRMAYWAGN 129

Query: 131 DS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           +  I    + + Y F ++  +  L + +    +    +       G       +      
Sbjct: 130 NWDIRTEIELDQYTFSVAGAVGLLLSDLWNWYDGTQTNRSYAIGFGRGLQAVNIARNHGE 189

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL- 247
              RG  + P                          I        + L  A    + +  
Sbjct: 190 DLRRGVSFLPQGWT----------------------ISDIHNYARRNLKLADYYTQSLPN 227

Query: 248 -PDVFPAFIPVSITESVLKHAQ 268
            P +    IP+++    L+   
Sbjct: 228 GPALDFCKIPLALAHGTLEVLA 249


>gi|329114584|ref|ZP_08243343.1| Phytoene Synthase Family Protein [Acetobacter pomorum DM001]
 gi|326696064|gb|EGE47746.1| Phytoene Synthase Family Protein [Acetobacter pomorum DM001]
          Length = 284

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 77/242 (31%), Gaps = 39/242 (16%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV-----RDTARNPITRDMRLQWWKDIF 84
             D DR L     P   R +   L  FH EL+R        +   P+   +RLQWW+++ 
Sbjct: 39  QADPDRALCLWFLPASVRDAAYVLLAFHNELIRALTPARSASVAGPMAGYIRLQWWREVL 98

Query: 85  ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAF 144
           E        +     +  L+ +V    +  +  L MI A   +       D +++     
Sbjct: 99  EQQ-----RKPEHILAPALMRLVESGQVQRETCLRMIAAREMELETT--QDVERWVLMMR 151

Query: 145 RISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
             +      A   L   + S  L+ +   G A   G ++   P+    G+  FP      
Sbjct: 152 DGAGA-FQQAIGELLGVQDSDELQRLTAGGAAYGAGSMLRHWPLLAGSGRFLFPGTQ--- 207

Query: 205 VGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVL 264
                         +++  A K F +               + P      +P  + +  L
Sbjct: 208 --------------EQLRQAGKTFLQECD---------FAALEPQCRKTALPAVLAKRDL 244

Query: 265 KH 266
             
Sbjct: 245 AR 246


>gi|313509740|gb|ADR66118.1| squalene synthase [Zinnia violacea]
          Length = 167

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 47/165 (28%), Gaps = 7/165 (4%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
            +   L + + Y    +     + A         +     ++ Y   ++  +    + + 
Sbjct: 2   VATAFLELKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLF 61

Query: 159 DSERYSASLRVI--KYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFL 213
            +     S         G+      +I       +   R ++++P +I        E   
Sbjct: 62  HASGTEISFPDSLSNSMGLFLQKTNIIRDYLEDINEIPRSRMFWPREIWSKYVNKLEDLK 121

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
             +NS++    +       L ++    + M  +          IP
Sbjct: 122 YEENSEKAIQCLNDMVTNALMHIEDCLKYMSDLRDPAIFRFCAIP 166


>gi|1546773|emb|CAA68054.1| squalene synthase [Ustilago maydis]
          Length = 572

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 73/312 (23%), Gaps = 43/312 (13%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL-----Q 78
               L                     +   Y     L  V D    P  R + L     +
Sbjct: 50  CWGFLDLTSRSFAAVIKELKGDVSRVICLFYLVLRALDTVEDDMTIPAQRKIPLLVNFYK 109

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS------ 132
           + +    + T+    E      VE   ++ +Y L +  +  +I                 
Sbjct: 110 YLEQPGWNFTESGPNEKDRQLLVEFDKVIAEYQLLDVGYKTVISDITAKMGAGMASYIEL 169

Query: 133 -------IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIG 180
                  +   K F+ Y   ++  +    + +    +        +     + G+     
Sbjct: 170 SAKGPLKVAMWKHFDLYCHFVAGLVGEGLSRLFSESKLERPWLGHQLELSNHMGLFLQKT 229

Query: 181 QLICQLPIHYHRGQLYFPLD----ILGAVGLDRE------SFLSGQNSDRISLAIKI--- 227
            +I         G+ ++P               +          G      +   +    
Sbjct: 230 NIIRDYAEDCEEGRYFWPQQCWGDDFAKFESQPDVAKGIIEIKPGHFRPADNELGQRSMY 289

Query: 228 ----FAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTP 281
                    + +   A + +  +          IP  +  + L     +   +   +   
Sbjct: 290 VLSSMLLDAMSHATHALDYLALLKEQSVFNFCAIPQVMAIATL-ELMFNNPDVFKKNVKI 348

Query: 282 NQLVRPWYMLSS 293
            + V    +L +
Sbjct: 349 RKGVAVGLILRA 360


>gi|159029470|emb|CAO87617.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 269

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/262 (10%), Positives = 69/262 (26%), Gaps = 42/262 (16%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDIFE 85
            L++     Y+     P     +++  Y     +  V D    +  ++   L+      +
Sbjct: 10  ILQETSRTFYIPISRLPDRLLEAVASAYLCMRAIDEVEDHPDLDNFSKAQILRQISLNLQ 69

Query: 86  SSTKGLIAES------ISPFSVELLSIVRQY---------DLPNQYFLDMIEAHFFDSYN 130
           + T+    E             E+   + ++                  M +   + + N
Sbjct: 70  AGTQNSTKEDFTFGLVHREILPEVTLRIGEWAMLAPDSIAPRVWDATAAMADRMAYWAGN 129

Query: 131 DS-IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPI 188
           +  I    + + Y F ++  +  L + +    +    +       G       +      
Sbjct: 130 NWDIRTEVELDQYTFSVAGAVGLLLSDLWNWYDGTQTNRSYAIGFGRGLQAVNIARNHGE 189

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL- 247
              RG  + P                          I    +   + L  A    + +  
Sbjct: 190 DRRRGVSFLPQGWT----------------------ISDIHDYARRNLKLADYYTQSLPN 227

Query: 248 -PDVFPAFIPVSITESVLKHAQ 268
            P +    IP+++    L+   
Sbjct: 228 GPALDFCKIPLALAHGTLEVLA 249


>gi|254293776|ref|YP_003059799.1| phytoene synthase protein [Hirschia baltica ATCC 49814]
 gi|254042307|gb|ACT59102.1| putative phytoene synthase protein [Hirschia baltica ATCC 49814]
          Length = 230

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 2/120 (1%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L+  D DR+LA   +P   R  L   Y    EL R       P+   +R+QWW+++ +  
Sbjct: 20  LKSSDEDRWLASRYAPKSKRAILVAFYSLVHELERAL-GVSEPMLGRIRVQWWREVLDQI 78

Query: 88  TKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS 147
             G +       ++ L                ++ A+          D          I+
Sbjct: 79  FSGSVV-RSHDLALALKDEFCDMPDMQPMVDGLLNAYDDVLDGIENADKPPRMETGAWIA 137


>gi|154346122|ref|XP_001568998.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134066340|emb|CAM44131.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 392

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/247 (9%), Positives = 68/247 (27%), Gaps = 21/247 (8%)

Query: 46  YRISLSFLYYFHTELMRVRDTARNPITRD--------MRLQWWKDIFESSTKGL-----I 92
            R     ++     L + R +     ++         M+L +WK+   +  +        
Sbjct: 76  MRRDYYAMWNLAMSLNKARWSMLEVHSQRGMKTTGAGMKLIFWKESVGAIMEKRKMSEGQ 135

Query: 93  AESISPFSVELLSIVRQYD-LPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
                P      + V +   +   +     +A           + +Q   +  +      
Sbjct: 136 FTDSHPVLRPFAAAVERNPHMTKAFVRGFTDARLRVIQQ--PGNVQQLFDHFDKFYGYFF 193

Query: 152 HLATMILDSERYSASLRVIKYAGIAQFIGQLI-CQLPIHYHRGQLYFPLDILGAVGLDRE 210
           +    +   +   A+  ++ + G A  +          +   G    P D+     ++  
Sbjct: 194 NSLLEVTHVKD-EAAEHLMTHIGRATGLTNHCVMFWKKYARLGFTMLPADLCADNHVNLG 252

Query: 211 SFLS---GQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHA 267
              +         +   +     +    +  A++  + +LP  +P  +        L   
Sbjct: 253 LLKNIPLASRDRAVRKVLFDVMCIVKDEMLHAQKVAKDVLPKAWPIVMECFYANYYLGFL 312

Query: 268 QNHGFKI 274
           Q   F +
Sbjct: 313 QRRDFDV 319


>gi|254248386|ref|ZP_04941706.1| Phytoene/squalene synthetase [Burkholderia cenocepacia PC184]
 gi|124874887|gb|EAY64877.1| Phytoene/squalene synthetase [Burkholderia cenocepacia PC184]
          Length = 269

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 52/194 (26%), Gaps = 18/194 (9%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
              +R      YL  +  PP    + S  Y     +  + D          RL   +   
Sbjct: 8   HDMIRQYSKTWYLPVVGLPPRLNEAASCAYLCMRGIDEIEDHPTMAAADRARL-LRRVSA 66

Query: 85  ESSTKGLIAESIS----------PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDS-- 132
              T    A+  +          P S++L   V    +     +    +   +   D   
Sbjct: 67  ILQTHFSPADFQTAFEGYEDVLPPVSLQLGQWVTLAPIDIAPRVLDTFSVMAERMADWVE 126

Query: 133 ----IFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLP 187
               I   +    Y + ++  L+ L + +         +       G A     ++    
Sbjct: 127 SDFAIRTEQDLNRYTYAVAGTLVLLLSDLWGWFNHTDTNRTDAIGYGRALQAVNILIDRD 186

Query: 188 IHYHRGQLYFPLDI 201
               RG  ++P   
Sbjct: 187 EDTGRGVDFWPHGW 200


>gi|313509746|gb|ADR66121.1| squalene synthase [Arnica montana]
          Length = 156

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/154 (9%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +         
Sbjct: 2   YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEILFPD 61

Query: 168 RVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    G+      +I       +   + ++++P +I        E   S +NS++    
Sbjct: 62  SMSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKSEENSEKAIQC 121

Query: 225 IKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
           +       L ++    + M  +          IP
Sbjct: 122 LNDMVTNALIHIEDCLKYMSDLRDPAIFRFCAIP 155


>gi|331248556|ref|XP_003336901.1| hypothetical protein PGTG_18307 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309315891|gb|EFP92482.1| hypothetical protein PGTG_18307 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 324

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 16/143 (11%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN---PITRDMR 76
                L +L+  D +  L     P   +     +  FH E+  + +       P+   MR
Sbjct: 40  SIEECLDSLKRNDPESVLQLPFWPKESQPGFVAIKSFHGEINNIPNAVSRSQKPLIAQMR 99

Query: 77  LQWWKDIFESSTKGLIA-------------ESISPFSVELLSIVRQYDLPNQYFLDMIEA 123
            QWW+D  +S      +              S  P    L  I++Q+ L   YF  +I A
Sbjct: 100 YQWWRDAIDSCYLSSSSSSQTVDNSPINQIPSNHPLIHLLKPIIKQHKLSKYYFARIINA 159

Query: 124 HFFDSYNDSIFDCKQFEHYAFRI 146
                 +  +        ++   
Sbjct: 160 SETHYLDRRLPTLTALADHSRST 182


>gi|224028763|gb|ACN33457.1| unknown [Zea mays]
          Length = 275

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/197 (8%), Positives = 55/197 (27%), Gaps = 8/197 (4%)

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
           +     S   L + + Y    +     + A         +     ++ Y   ++  + + 
Sbjct: 2   DKFHLVSTAFLELGQGYQKAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGYG 61

Query: 154 ATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLD 208
            + +  +      A   +    G+      +I       +   + ++++P +I       
Sbjct: 62  LSRLFYAAGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADK 121

Query: 209 RESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV--FPAFIPVSITESVLKH 266
            E F   +N+++    +       L +  +  + M  +          IP  +       
Sbjct: 122 LEDFKYEENTEKAVQCLNDIVTNALIHAEECLQYMSALKNHAIFRFCAIPQIMAIGTC-A 180

Query: 267 AQNHGFKIVSHSHTPNQ 283
              +   +        +
Sbjct: 181 LCYNNVHVFRGVVKMRR 197


>gi|327288074|ref|XP_003228753.1| PREDICTED: squalene synthase-like, partial [Anolis carolinensis]
          Length = 351

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/227 (8%), Positives = 57/227 (25%), Gaps = 24/227 (10%)

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+ +  +     + E     S+E  ++ + Y          +     +     +   K +
Sbjct: 43  WRFMGSNDKNKHVLEDFPTISLEFRNLAKVYQDVIADVCRKVGLGMAEFLEKKVESEKDW 102

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQ 194
           + Y    S +L    + +    +                G+      +I         G+
Sbjct: 103 DKYCHYASGQLGIGLSQLFSVSKLEDLTVGQDIELANTMGVFLHKIDIIRDYHEDLLAGR 162

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYIL------- 247
            ++P ++              +N ++    +       L ++      +  +        
Sbjct: 163 EFWPQEVWSKYANTMSDLARPENVNKAIQCLNELITNALHHIPDVLTYLSRLKNQSVFNF 222

Query: 248 ---PDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYML 291
              P V    I  +           +  ++        +      M+
Sbjct: 223 CAIPQVRAIVILAACY---------NNPQVFQGPVKIRKGQDVSLMM 260


>gi|194390212|dbj|BAG61868.1| unnamed protein product [Homo sapiens]
 gi|221040248|dbj|BAH14905.1| unnamed protein product [Homo sapiens]
          Length = 332

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/213 (8%), Positives = 61/213 (28%), Gaps = 8/213 (3%)

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
           W+ +        + E     S+E  ++  +Y          +     +  +  +   +++
Sbjct: 24  WRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEW 83

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQ 194
           + Y   ++  +    + +  +  +   L           G+      +I         G+
Sbjct: 84  DKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGR 143

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF--P 252
            ++P ++          F   +N D     +       L ++      +  +        
Sbjct: 144 EFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNF 203

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
             IP  +  + L  A  +  ++   +    +  
Sbjct: 204 CAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 235


>gi|20380224|gb|AAH28166.1| C8orf38 protein [Homo sapiens]
 gi|123981476|gb|ABM82567.1| chromosome 8 open reading frame 38 [synthetic construct]
 gi|123996309|gb|ABM85756.1| chromosome 8 open reading frame 38 [synthetic construct]
          Length = 121

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 23 FVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELM 61
          + L  LR  DY+ YL  LL P   R S+  L  F+ EL 
Sbjct: 60 YCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELA 98


>gi|313509758|gb|ADR66127.1| squalene synthase [Hieracium umbellatum]
          Length = 173

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/169 (9%), Positives = 48/169 (28%), Gaps = 7/169 (4%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
            S   L + + Y    +     + A         +     ++ Y   ++  +    + + 
Sbjct: 2   VSAAFLELKKGYQEAIEDITMRMGAGMAKFICTEVETIDDYDEYCHYVAGLVGLGLSKLF 61

Query: 159 DSERYSA--SLRVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFL 213
            +          +    G+      +I       +   + ++++P +I        E   
Sbjct: 62  HAGGTEKLFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELK 121

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSIT 260
             +NS++    +       L ++    + M  +          IP  + 
Sbjct: 122 YEENSEKAVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQIMA 170


>gi|313509748|gb|ADR66122.1| squalene synthase [Hieracium onegense]
 gi|313509750|gb|ADR66123.1| squalene synthase [Hieracium onegense]
 gi|313509752|gb|ADR66124.1| squalene synthase [Hieracium lactucella]
          Length = 173

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/169 (9%), Positives = 48/169 (28%), Gaps = 7/169 (4%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
            S   L + + Y    +     + A         +     ++ Y   ++  +    + + 
Sbjct: 2   VSAAFLELKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLF 61

Query: 159 DSERYSA--SLRVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFL 213
            +          +    G+      +I       +   + ++++P +I        E   
Sbjct: 62  HAGGTEKLFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELK 121

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSIT 260
             +NS++    +       L ++    + M  +          IP  + 
Sbjct: 122 YEENSEKAVQCLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIPQIMA 170


>gi|294677294|ref|YP_003577909.1| phytoene synthase family protein [Rhodobacter capsulatus SB 1003]
 gi|294476114|gb|ADE85502.1| phytoene synthase family protein [Rhodobacter capsulatus SB 1003]
          Length = 253

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%)

Query: 17 FSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMR 76
           S         L   D DR+ A +  P   R +L  LY  +  + +    +  P+  +MR
Sbjct: 1  MSDPVALCAERLAAGDPDRFAAVMACPAPDRAALFALYAANLAIAQAPWASAEPLVAEMR 60

Query: 77 LQWWKDIFESSTKGLIAESI 96
          LQWW D   +          
Sbjct: 61 LQWWIDALGALADQGRPVPQ 80


>gi|313509760|gb|ADR66128.1| squalene synthase [Hieracium porrifolium]
 gi|313509762|gb|ADR66129.1| squalene synthase [Hieracium scabrum]
 gi|313509764|gb|ADR66130.1| squalene synthase [Hieracium cf. guatemalense KK-2010]
 gi|313509766|gb|ADR66131.1| squalene synthase [Hieracium intybaceum]
 gi|313509768|gb|ADR66132.1| squalene synthase [Hieracium intybaceum]
          Length = 173

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/169 (9%), Positives = 48/169 (28%), Gaps = 7/169 (4%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
            S   L + + Y    +     + A         +     ++ Y   ++  +    + + 
Sbjct: 2   VSAAFLELKKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLF 61

Query: 159 DSERYSA--SLRVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFL 213
            +          +    G+      +I       +   + ++++P +I        E   
Sbjct: 62  HAGGTEKLFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELK 121

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSIT 260
             +NS++    +       L ++    + M  +          IP  + 
Sbjct: 122 YEENSEKAVQCLNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIPQIMA 170


>gi|302409798|ref|XP_003002733.1| squalene synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358766|gb|EEY21194.1| squalene synthetase [Verticillium albo-atrum VaMs.102]
          Length = 366

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/157 (8%), Positives = 45/157 (28%), Gaps = 8/157 (5%)

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLICQLPI 188
               ++E Y   ++  +    T +      +      +       G       +I  +  
Sbjct: 61  EKITEYELYCHYVAGLVGEGLTKLFVRGNLANPRLEERPELTESMGQFLQKTNIIRDVHE 120

Query: 189 HYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
            +   + ++P +I        E     +N ++            LK+       M  +  
Sbjct: 121 DFEDNRSFWPKEIWSKHVNTWEDLFKPENREKAMQCSSEMVLNALKHAEDCLFYMAGMRD 180

Query: 249 DVFPAFIPVSITESV--LKHAQNHGFKIVSHSHTPNQ 283
                F+ +  + ++  L+    +  ++       ++
Sbjct: 181 QSCFNFVAIPQSMAIANLELVFRNP-RLFDSHLKISK 216


>gi|282897465|ref|ZP_06305467.1| Squalene/phytoene synthase [Raphidiopsis brookii D9]
 gi|281198117|gb|EFA73011.1| Squalene/phytoene synthase [Raphidiopsis brookii D9]
          Length = 215

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 57/191 (29%), Gaps = 19/191 (9%)

Query: 25  LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQWWKDI 83
           L+ L++     Y+   + P   + +++  Y     +  + D A     T+ + LQ     
Sbjct: 8   LQILKETSRTFYIPISIMPSGLQEAVASAYLCMRAIDEIEDHATLENHTKGILLQSISQT 67

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHF-----------------F 126
            ++   G   ++ S         + +  L  + +  +                      +
Sbjct: 68  LQAGVDGFAVDAFSIGFKGYEDSLPEVSLRIREWAILAPESIAPRIWDATAAMADRMAYW 127

Query: 127 DSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQLICQ 185
              N  I +    + Y F ++  +  L + +    +  + +       G       ++  
Sbjct: 128 SQINWKITNEYDLDRYTFGVAGAVGLLLSDLWSWYDGTTTNRMEAIAFGRGLQAVNILRN 187

Query: 186 LPIHYHRGQLY 196
                 RG  +
Sbjct: 188 NSEDLTRGVNF 198


>gi|317453459|emb|CBY78074.1| truncated phytoene synthase/carotene cyclase [Neurospora crassa]
          Length = 338

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 2/69 (2%)

Query: 4   KFLTKNTRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRV 63
           + +  +    E+I        +  LR      YLA  L     RI L  LY F      +
Sbjct: 269 RLINTSRYDLERI--EGLREAVERLRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDL 326

Query: 64  RDTARNPIT 72
            D A++   
Sbjct: 327 VDDAKSRRE 335


>gi|313509738|gb|ADR66117.1| squalene synthase [Helianthus annuus]
          Length = 167

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/165 (9%), Positives = 47/165 (28%), Gaps = 7/165 (4%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
            +   L + + Y    +     + A         +     ++ Y   ++  +    + + 
Sbjct: 2   VATAFLELKKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLF 61

Query: 159 DSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFL 213
            +          +    G+      +I       +   + ++++P +I        E F 
Sbjct: 62  HASGTEILFPDSMSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDFK 121

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
              NS++    +       L ++    + M  +          IP
Sbjct: 122 YEDNSEKAVQCLNDMVTNALIHIEDCLKYMSDLRDPAIFRFCAIP 166


>gi|125546109|gb|EAY92248.1| hypothetical protein OsI_13969 [Oryza sativa Indica Group]
          Length = 397

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/167 (9%), Positives = 46/167 (27%), Gaps = 8/167 (4%)

Query: 124 HFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQ 181
           H       S+     +  Y   ++  + +  + +  +      AS  +    G+      
Sbjct: 140 HVQFLAVLSVETVDDYNEYCHYVAGLVGYGLSRLFHAGGTEDLASDSLSNSMGLFLQKIN 199

Query: 182 LICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFK 238
           +I       +   + ++++P +I        E     +NS++    +       L +   
Sbjct: 200 IIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKYEENSEKAVQCLNDMVTNALSHAED 259

Query: 239 AREEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             + M  +          IP  +          +   +        +
Sbjct: 260 CLQYMSALKDHAIFRFCAIPQIMAIGTC-AICYNNVNVFRGVVKMRR 305


>gi|313509730|gb|ADR66113.1| squalene synthase [Artemisia campestris]
          Length = 160

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 46/156 (29%), Gaps = 7/156 (4%)

Query: 108 RQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--A 165
           R Y    +     + A         +     ++ Y   ++  +    + +  S       
Sbjct: 4   RGYQEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSKLFHSSGTEILF 63

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRIS 222
           S  +    G+      +I       +   + ++++P +I        E     +NS++ +
Sbjct: 64  SDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKYEENSEKAT 123

Query: 223 LAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
             +       L ++    + M  +          IP
Sbjct: 124 QCLNDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIP 159


>gi|313509726|gb|ADR66111.1| squalene synthase [Aster amellus]
          Length = 156

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/142 (8%), Positives = 39/142 (27%), Gaps = 5/142 (3%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +         
Sbjct: 2   YQEAIENITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEKLFPD 61

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHRGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    G+      +I       +      +++P +I        E     +NS++    
Sbjct: 62  SISNSMGLFLQKTNIIRDYLEDINEXPKSRMFWPREIWSKYVNKLEDLKYEENSEKAXQC 121

Query: 225 IKIFAELGLKYLFKAREEMRYI 246
           +       L ++    + M  +
Sbjct: 122 LNDMVTNALIHIEDCLKYMSEL 143


>gi|238608555|ref|XP_002397263.1| hypothetical protein MPER_02344 [Moniliophthora perniciosa FA553]
 gi|215471364|gb|EEB98193.1| hypothetical protein MPER_02344 [Moniliophthora perniciosa FA553]
          Length = 76

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%)

Query: 25 LRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIF 84
             ++  DY+ +L     P   +     L  F  EL  V+D   NP    MR+Q+W+D  
Sbjct: 9  RDFVQKHDYESFLISHFYPKELQGGYFALKAFSAELAMVQDAVTNPTIGAMRMQFWRDAV 68

Query: 85 ESSTKGLI 92
          +S ++   
Sbjct: 69 KSISEVRP 76


>gi|313509728|gb|ADR66112.1| squalene synthase [Artemisia campestris]
          Length = 155

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASL 167
           Y    +     + A         +     ++ Y   ++  +    + +  S       S 
Sbjct: 1   YQEAIEDITMTMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSKLFHSSGTEILFSD 60

Query: 168 RVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    G+      +I       +   + ++++P +I        E     +NS++ +  
Sbjct: 61  SISNSMGLFLQKTNIIRDYLEDINEIPKSRVFWPREIWSKYVNKLEDLKYEENSEKATQC 120

Query: 225 IKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
           +       L ++    + M  +          IP
Sbjct: 121 LNDMVTNALIHIEDCLKYMSQLKDPAIFRFCAIP 154


>gi|134075637|emb|CAK39303.1| unnamed protein product [Aspergillus niger]
          Length = 582

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 15/164 (9%)

Query: 28  LRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESS 87
           L++     +L   L     RI L FLY F   +  + D A +       +   + + +S+
Sbjct: 310 LQEKSQSMFLGSALFQGQLRIDLIFLYSFCRVMDDLIDEAEDEQEARFWVTECRHLLDST 369

Query: 88  TKGLI---------AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND------S 132
            +                     + +S +    L N  F D+++    D   +       
Sbjct: 370 HRSEPHSDHFYTGKKGEEHERLRQSISYLPPSHLSNDSFDDLLKGFEIDLKFNPQREAFP 429

Query: 133 IFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIA 176
           I      + YA  ++  +  L   +         ++ +     A
Sbjct: 430 IQSEYCLDQYAGFVAGTVGVLVFDLTLFHCGHYFIQDVPRLRRA 473


>gi|313509744|gb|ADR66120.1| squalene synthase [Eupatorium cannabinum]
          Length = 166

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 49/165 (29%), Gaps = 7/165 (4%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
            +  LL + + Y    +     + A         +     ++ Y   ++  +    + + 
Sbjct: 1   VATCLLELKKGYQEAIEDITMRMGAGMAKFICKEVESVDDYDEYXHYVAGLVGLGLSKLF 60

Query: 159 DSERYSA--SLRVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFL 213
            +       S  +    G+      +I       +   + ++++P +I        E   
Sbjct: 61  HASGTEKLFSDSMSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLK 120

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
             +NS++    +       L ++    + M  +          IP
Sbjct: 121 YEENSEKAIQCLNDMVTNALIHIDDCLKYMSELRDPAIFRFCAIP 165


>gi|193786634|dbj|BAG51957.1| unnamed protein product [Homo sapiens]
          Length = 306

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/194 (8%), Positives = 56/194 (28%), Gaps = 8/194 (4%)

Query: 99  FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL 158
            S+E  ++  +Y          +     +  +  +   ++++ Y   ++  +    + + 
Sbjct: 17  ISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLF 76

Query: 159 DSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFL 213
            +  +   L           G+      +I         G+ ++P ++          F 
Sbjct: 77  SASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFA 136

Query: 214 SGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHG 271
             +N D     +       L ++      +  +          IP  +  + L  A  + 
Sbjct: 137 KPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNN 195

Query: 272 FKIVSHSHTPNQLV 285
            ++   +    +  
Sbjct: 196 QQVFKGAVKIRKGQ 209


>gi|313509742|gb|ADR66119.1| squalene synthase [Galinsoga parviflora]
          Length = 156

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/142 (9%), Positives = 40/142 (28%), Gaps = 5/142 (3%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +         
Sbjct: 2   YQEIIKDITMRMGAGMAKFIRKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEMLFPD 61

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHR---GQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    GI      +I       +     ++++P +I        E     +NS++    
Sbjct: 62  SMSNSMGIFLQKINIIQDYLEDINEIPNSRMFWPREIWSKYVNKLEDLKYEENSEKAIQC 121

Query: 225 IKIFAELGLKYLFKAREEMRYI 246
           +       L ++    + M  +
Sbjct: 122 LNDMVTNALIHIEDCLKYMSDL 143


>gi|313509736|gb|ADR66116.1| squalene synthase [Cichorium intybus]
          Length = 159

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/146 (8%), Positives = 41/146 (28%), Gaps = 5/146 (3%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +         
Sbjct: 5   YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGTEKLFPD 64

Query: 168 RVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    G+      +I       +   + ++++P +I        E     +NS++    
Sbjct: 65  SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQC 124

Query: 225 IKIFAELGLKYLFKAREEMRYILPDV 250
           +       L ++    + M  +    
Sbjct: 125 LNDMVTNALIHIEDCLKYMSELRDPA 150


>gi|325519031|gb|EGC98537.1| squalene/phytoene synthase [Burkholderia sp. TJI49]
          Length = 117

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 7/117 (5%)

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIKY-------AGIAQFIGQLICQLPIHYHR 192
           + Y + +   +    T +      +A    +          G A  +  ++         
Sbjct: 1   DRYTYLVEGCVGEFWTDMTGMHTRAARRWNLADMREKGIRFGKALQMTNILRDCAKDLRI 60

Query: 193 GQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
           G+ Y P D+LGA GL     L+   S R    +     + L     A      I   
Sbjct: 61  GRCYLPEDVLGAHGLRVADLLAPDASSRARGVLFDLLRVALAQYRDACSYTLAIPRR 117


>gi|164657227|ref|XP_001729740.1| hypothetical protein MGL_3284 [Malassezia globosa CBS 7966]
 gi|159103633|gb|EDP42526.1| hypothetical protein MGL_3284 [Malassezia globosa CBS 7966]
          Length = 392

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/317 (8%), Positives = 75/317 (23%), Gaps = 45/317 (14%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
                  L                     +   Y     L  V D     P  +   L  
Sbjct: 44  MRECWSFLDATSRSFAAVIKELKGELSRVICIFYLVLRGLDTVEDDMTLKPDVKIPLLLD 103

Query: 80  WKDIFESSTKGL----IAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS------- 128
           +                 E      VE   ++ +Y + N+    +I              
Sbjct: 104 FHKKLSEPGWNFTGSGPNEKDRQLLVEFDKVIAEYQMLNEGCRFVIADICARMGAGMASY 163

Query: 129 -------YNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIA 176
                     ++   + ++ Y   ++  +    + +    +    L  ++     + G+ 
Sbjct: 164 IELGDSPNGLTMEGWRDYDLYCHFVAGLVGEGLSGLFVQTKIEKPLIGLQLSLSNHMGLF 223

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGL--DRESFLSGQNS---------------- 218
                +I         G+ ++P +  G+ G+   +     G                   
Sbjct: 224 LQKTNIIRDYAEDCREGRSFWPKECWGSGGVFARQTEVQRGVVETYPGSNSYKFTDTVEG 283

Query: 219 DRISLAIKIFAELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVS 276
            +    +       + ++  + E +  +           P  +  + L+        +  
Sbjct: 284 RKAREVLSTMLLDAVSHVTSSLEYLILLRDQSVFNFCATPQVMAIATLEVLV-DNANVYK 342

Query: 277 HSHTPNQLVRPWYMLSS 293
            +    + +    +L S
Sbjct: 343 KNVKIRKSLAVRLILRS 359


>gi|254670696|emb|CBA06836.1| putative phytoene synthase [Neisseria meningitidis alpha153]
          Length = 113

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 1/107 (0%)

Query: 191 HRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDV 250
            R    F  D L   G+       G+        +        + L       R +   +
Sbjct: 7   KRAGFIFRRDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARELKGRI 66

Query: 251 FPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
                 + +  + +L+      + + +     ++      +  +  K
Sbjct: 67  GLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK 113


>gi|313509770|gb|ADR66133.1| squalene synthase [Hispidella hispanica]
          Length = 155

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/146 (8%), Positives = 41/146 (28%), Gaps = 5/146 (3%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +         
Sbjct: 1   YQEAIEDITMRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFPD 60

Query: 168 RVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    G+      +I       +   + ++++P +I        E     +NS++    
Sbjct: 61  SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQC 120

Query: 225 IKIFAELGLKYLFKAREEMRYILPDV 250
           +       L ++    + M  +    
Sbjct: 121 LNDMVTNALIHIENCLKYMSELRDPA 146


>gi|163793148|ref|ZP_02187124.1| putative phytoene synthase [alpha proteobacterium BAL199]
 gi|159181794|gb|EDP66306.1| putative phytoene synthase [alpha proteobacterium BAL199]
          Length = 311

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/244 (10%), Positives = 66/244 (27%), Gaps = 26/244 (10%)

Query: 29  RDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTA------RNPITRDMRL----Q 78
              D   + A  L P   +   +  Y     +    D         +       +    +
Sbjct: 20  ERNDSTLFHATRLLPRFRQDLFAGAYAAMRVIDDAVDEDFLTRPEPDRHAGRAAMTATVE 79

Query: 79  WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQ 138
            W+      T           ++   + V   DL ++ +  +  A   D     + D   
Sbjct: 80  AWRRQTAEGTTDGPLSPS--VALGFRATVGCSDLGSEPWNGLAAAMTEDVAEADMPDWAA 137

Query: 139 FEHYAFRI----SSRLIHLATM-----ILDSERYSASLRVIKYAGIAQFIGQLICQLPIH 189
           F+ YA       ++  I+L            +             +  ++  ++  L   
Sbjct: 138 FDRYADGATVAPATVFIYLLACRHSDGHYRCDLPERPRYYASDLAVFCYLVHILRDLAKD 197

Query: 190 Y--HRGQLYFPLDILGAVGLDRESFLSG---QNSDRISLAIKIFAELGLKYLFKAREEMR 244
                  +  P  +L   G +R++           ++     +       +  + R+ + 
Sbjct: 198 AGSRGRLVTIPRTVLADFGFERDTLADALTTGAHAKVDRLADVLLNRASVHRSRGRQRLA 257

Query: 245 YILP 248
            ++P
Sbjct: 258 ELMP 261


>gi|313509756|gb|ADR66126.1| squalene synthase [Hieracium umbellatum]
          Length = 156

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/154 (9%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +         
Sbjct: 2   YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFPD 61

Query: 168 RVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    G+      +I       +   + ++++P +I        E     +NS++    
Sbjct: 62  SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVHKLEELKYEENSEKAVQC 121

Query: 225 IKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
           +       L ++    + M  +          IP
Sbjct: 122 LNDMVTNALIHIEDCLKYMSELRDPAIFRFCAIP 155


>gi|71025609|gb|AAZ17652.1| phytoene synthase [Citrus clementina]
          Length = 87

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 26/90 (28%), Gaps = 3/90 (3%)

Query: 63  VRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIE 122
           + D           L  W+   E   +             L   V ++ +  Q F DMIE
Sbjct: 1   LVDGPNASHITPTALDRWESRLEDLFR---GRPFDMLDAALSDTVTKFPVDIQPFRDMIE 57

Query: 123 AHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
               D       +  +   Y + ++  +  
Sbjct: 58  GMRMDLRKSRYKNFDELYLYCYYVAGTVGL 87


>gi|313509772|gb|ADR66134.1| squalene synthase [Andryala pinnatifida]
          Length = 154

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/154 (9%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +         
Sbjct: 1   YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFPD 60

Query: 168 RVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    G+      +I       +   + ++++P +I        +     +NS++    
Sbjct: 61  SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSEYVNKLKELKYEENSEKAVQC 120

Query: 225 IKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
           +       L ++    + M  +   P      IP
Sbjct: 121 LNDMVTNALIHIENCLKYMSELRDPPIFRFCAIP 154


>gi|147838294|emb|CAN74446.1| hypothetical protein VITISV_007539 [Vitis vinifera]
          Length = 187

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 14/43 (32%)

Query: 13  EEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYY 55
            + + S           +     YL  +L  P  R ++  +Y 
Sbjct: 137 TQSLLSEAYDRCGEVCAEYAKTFYLGTMLMTPERRRAIWAIYG 179


>gi|325128577|gb|EGC51448.1| hypothetical protein NMXN1568_0653 [Neisseria meningitidis N1568]
          Length = 94

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/94 (7%), Positives = 26/94 (27%), Gaps = 1/94 (1%)

Query: 204 AVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSI-TES 262
             G+  E   +G+        +        + L       R +   +      + +  + 
Sbjct: 1   KFGVSEEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARELNGRIGLELRMIVLGAQL 60

Query: 263 VLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIK 296
           +L+      + + +     ++      +  +  K
Sbjct: 61  ILQKLDACRYDVFAQRPVLDKKDWLIMLKKALWK 94


>gi|167720060|ref|ZP_02403296.1| putative phytoene synthase [Burkholderia pseudomallei DM98]
          Length = 99

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 28/88 (31%)

Query: 22  LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWK 81
            +  +         Y A   +P   +  ++ L+    EL +      +P     +L WW+
Sbjct: 5   EYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKLAWWQ 64

Query: 82  DIFESSTKGLIAESISPFSVELLSIVRQ 109
               +   G  +  +S         + +
Sbjct: 65  KELAALASGHPSHPVSQALAAHHPDIAR 92


>gi|302691706|ref|XP_003035532.1| hypothetical protein SCHCODRAFT_84687 [Schizophyllum commune H4-8]
 gi|300109228|gb|EFJ00630.1| hypothetical protein SCHCODRAFT_84687 [Schizophyllum commune H4-8]
          Length = 506

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/255 (9%), Positives = 63/255 (24%), Gaps = 27/255 (10%)

Query: 19  RDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPIT-RDMRL 77
                    L                     +   Y     L  + D    P   +   L
Sbjct: 47  ESMRRCWHFLDLTSRSFAAVIKELEGDLARVVCLFYLVLRGLDTIEDDMTIPDEVKQPIL 106

Query: 78  QWWKDIF----ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN--- 130
           + + +       +  +    E      VE   +V +  +    + D+I            
Sbjct: 107 RKFHEHTVTPGWTFKESGPNEKDRQLLVEYNVVVEELHILQPEYRDIIVDICAKMEVGMA 166

Query: 131 -----------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAG 174
                        +   + ++ Y   ++  +    + +  + +  A     +       G
Sbjct: 167 DYAHRHATTGSVYLEKTEDYDLYCHYVAGLVGEGCSRLFTASKKEAPWLGTELELANSMG 226

Query: 175 IAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL---AIKIFAEL 231
           +      +I          + ++P +I G  G      + G   + +     A       
Sbjct: 227 LFLQKTNIIRDFREDVDERRFFWPREIWGQFGFGDVKEMCGTEPEVVERALYAQSAMILN 286

Query: 232 GLKYLFKAREEMRYI 246
            L ++    + +R +
Sbjct: 287 ALNHVPDVLDYLRCL 301


>gi|168041548|ref|XP_001773253.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675448|gb|EDQ61943.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 320

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/285 (9%), Positives = 69/285 (24%), Gaps = 42/285 (14%)

Query: 2   VLKFLTKNTRKEEKIFSRDS-LFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTEL 60
           ++K      R +  I       F  R L  +     +         R ++   Y     L
Sbjct: 17  LVKLKVDAMRAQRAIPKDPYLAFCYRMLMRVSRSFSIVIQQLRTELRDAVCVFYLVLRGL 76

Query: 61  MRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDM 120
             + D                         +  +   P        +  YD   ++    
Sbjct: 77  DTIEDDMA----------------------IPIDIKVPILKSFHEHI--YDPSWKFVCGE 112

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIG 180
            +     +  + + +   F +        +  +   +        +  +         I 
Sbjct: 113 KDYKELMNKFECVSN--AFLNLDEGYQRVIAEMTNRMGVG----MAKFIETEVCAMFGIC 166

Query: 181 QLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAR 240
           ++           ++++P +I G  G   E F   +NS+     +       L +     
Sbjct: 167 EI--------PAPRMFWPHEIWGKFGTRLEDFKLEENSENAVRCLNAMITNALTHATDCL 218

Query: 241 EEMRYILPDV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           + +     +       IP  +    L     +   +        +
Sbjct: 219 KYIEANKDESNLRFCAIPQIMAIGTLAE-CYNNINVFRGVVKIRR 262


>gi|313509754|gb|ADR66125.1| squalene synthase [Hieracium lactucella]
          Length = 156

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/154 (9%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +         
Sbjct: 2   YQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHAGGTEKLFPD 61

Query: 168 RVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLA 224
            +    G+      +I       +   + ++++P +I        E     +NS++    
Sbjct: 62  SISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEELKYEENSEKAVQC 121

Query: 225 IKIFAELGLKYLFKAREEMRYI--LPDVFPAFIP 256
           +       L ++    + M  +          IP
Sbjct: 122 LNDMVTNALIHIDDCLKYMSEMRDPAIFRFCAIP 155


>gi|238579457|ref|XP_002389063.1| hypothetical protein MPER_11859 [Moniliophthora perniciosa FA553]
 gi|215450927|gb|EEB89993.1| hypothetical protein MPER_11859 [Moniliophthora perniciosa FA553]
          Length = 387

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLICQLPI 188
               +++ Y   ++  +    + +  + +  A     +       G+      +I     
Sbjct: 90  ATIAEYDLYCHYVAGLVGEGLSGLFSASKKEAPWLADQLELSNSLGLLLQKTNIIRDYRE 149

Query: 189 HYHRGQLYFPLDILGAVGL---DRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
               G+ ++P +I G       D +   + +  +R            +++L    + +R 
Sbjct: 150 DAEEGRYFWPREIWGQKKYKFKDMKDMYAPEAKERAQWVQSEMILDAMRHLTDGLDYLRL 209

Query: 246 ILPDVFPAF--IPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
           +       F  IP S+  + L        ++   +    +      ++ S
Sbjct: 210 LKNQSVFVFCAIPASMAIATL-ELCFMNPEMFQRNIKIRKAAAADLIMRS 258


>gi|326512650|dbj|BAJ99680.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 262

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/157 (8%), Positives = 43/157 (27%), Gaps = 8/157 (5%)

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH 191
                ++ Y   ++  + +  + +  +      A   +    G+      +I       +
Sbjct: 14  QTIDDYDEYCHYVAGLVGYGLSRLFHATGTEDLAPDHLSNSMGLFLQKTNIIRDYLEDIN 73

Query: 192 RGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
                 +++P +I        E     +NS++    +       L +     + M  +  
Sbjct: 74  EIPKCRMFWPREIWSKYVDKLEDLKYEENSEKAVQCLNDMVTNALIHAHDCLQYMSALKD 133

Query: 249 DV--FPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
           +       IP  +          +  K+        +
Sbjct: 134 NSNFRFCAIPQIMAIGTC-AICYNNVKVFRGVVKMRR 169


>gi|238589699|ref|XP_002392097.1| hypothetical protein MPER_08376 [Moniliophthora perniciosa FA553]
 gi|215457676|gb|EEB93027.1| hypothetical protein MPER_08376 [Moniliophthora perniciosa FA553]
          Length = 275

 Score = 53.2 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/187 (7%), Positives = 49/187 (26%), Gaps = 25/187 (13%)

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLICQLPI 188
                ++ Y   ++  +    + +  + +  A+    +       G+      +I     
Sbjct: 70  ETVADYDLYCHYVAGLVGEGLSGLFSASKKEAAWIAGQLELSNSLGLLLQKTNIIRDYRE 129

Query: 189 HYHRGQLYFPLDIL--GAVGLDR-ESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRY 245
              + + ++P +I      G          +N  +            +++L    + +R 
Sbjct: 130 DIEQRRFFWPREIWGNKEYGFKEMAEMYLPENKQKAQWVQSEMVLDAMRHLTDGLDYLRL 189

Query: 246 ILPDVF--PAFIPVSITESVLK-------------HAQNHGFKIVSHSHTPNQLVRPWYM 290
           +          IP ++  + L+               +      +              +
Sbjct: 190 LKNQSVFTFCAIPATMAIATLELCFMNPDMFQRNIKIRKADAASLIMRS--TNPRDVAVI 247

Query: 291 LSSSIKK 297
             +  +K
Sbjct: 248 FRTYCRK 254


>gi|167951045|ref|ZP_02538119.1| probable geranylgeranyl-diphosphate geranylgeranyltransferase
           [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 189

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 4/123 (3%)

Query: 35  RYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAE 94
            Y A   SP   R  +  L+ +  EL+R+     +      RL+WW+     +       
Sbjct: 19  NYYAIRFSPRNGREQIGLLFAWREELLRIARECSDAGVAQARLEWWRSE---TANACRGH 75

Query: 95  SISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN-DSIFDCKQFEHYAFRISSRLIHL 153
           +  P +  L+ +V    LP   F  M ++    +     +    + + +A ++      L
Sbjct: 76  ARHPLAQALIPLVSDEKLPLALFDQMADSDEAATSGAPRLQTGAELQQHARQLDGSFCEL 135

Query: 154 ATM 156
              
Sbjct: 136 LAR 138


>gi|93008991|gb|ABE97915.1| squalene synthase [Schizochytrium limacinum]
          Length = 387

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/189 (9%), Positives = 48/189 (25%), Gaps = 19/189 (10%)

Query: 121 IEAHFFDSYNDSIFDCKQFEHYAFRISSRLI-----HLATMILDSERYSASLRVIKYAGI 175
           +  +      +   D K FE Y   ++  +        A+         +   +    G 
Sbjct: 124 MAGYVSRDLKNGTDDAKDFEQYCHYVAGTVGDGLTRIFASCGYCPADLVSHRELWDAMGS 183

Query: 176 AQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISL-----------A 224
                 +I         G+ ++P  +          F   ++  R++             
Sbjct: 184 FLQRTNIIRDYLEDLVDGRAWWPRSVWELYVTKDAEFGRSKSLSRLADSASIEAGLSTSC 243

Query: 225 IKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPN 282
           +       L+ +      +  +     +    +P  +  + L   +    K+        
Sbjct: 244 LNHMIADALEMVGSCLSYLEALNDPDVISFCALPQVMAIATLS-VRFDNQKVFQGVVKIR 302

Query: 283 QLVRPWYML 291
           +      ML
Sbjct: 303 KGQAARIML 311


>gi|7960271|gb|AAF71269.1| squalene synthase [Citrus sinensis]
          Length = 146

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 39/134 (29%), Gaps = 7/134 (5%)

Query: 134 FDCKQFEHYAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH 191
                ++ Y + ++  +    + +  +      A   +    G+      +I       +
Sbjct: 10  ESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDIN 69

Query: 192 RGQ---LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILP 248
                 +++P +I        E     +NSD+    +       L ++    + M  +  
Sbjct: 70  EIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRD 129

Query: 249 DV--FPAFIPVSIT 260
                   IP  + 
Sbjct: 130 HAIFRFCAIPQIMA 143


>gi|258577377|ref|XP_002542870.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237903136|gb|EEP77537.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 308

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 33/126 (26%), Gaps = 3/126 (2%)

Query: 170 IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFA 229
            K  G+      +I  +       + ++P +I      + E     +N D          
Sbjct: 31  FKSMGLFLQKTNIIRDVREDEDDNRRFWPKEIWSKHVDNWEDLFKPENRDAALNCSAEMV 90

Query: 230 ELGLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRP 287
              L +       +  +        A IP S+  + L         +   +    +    
Sbjct: 91  MNALGHAEDCLFYLAGLTEQSVFNFAAIPQSMAIATL-ELCFRNPAMFDRNIKITKGHAC 149

Query: 288 WYMLSS 293
             M  S
Sbjct: 150 QLMWQS 155


>gi|313509732|gb|ADR66114.1| squalene synthase [Artemisia campestris]
          Length = 149

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/139 (9%), Positives = 37/139 (26%), Gaps = 7/139 (5%)

Query: 125 FFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SLRVIKYAGIAQFIGQL 182
                 D +     ++ Y    +  +    + +  +          +    G+      +
Sbjct: 10  MAKFIRDEVDTINDYDEYCHYATGLVGIGLSKLFHASGKEISLPDPISNSMGLFLQKANI 69

Query: 183 ICQLPIHYH---RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKA 239
           I       +   +  +++P +I        E      NS++    +       L ++   
Sbjct: 70  IRDFHEDINEVPKPLIFWPREIWSKYVDKFEDMRHKNNSEKALECLNDMVTNALIHIEDC 129

Query: 240 REEMRYI--LPDVFPAFIP 256
            + M  +          IP
Sbjct: 130 LKYMSNLRDPAIFRSCAIP 148


>gi|254839967|gb|ACT83530.1| phytoene synthase [Musa acuminata AAA Group]
          Length = 64

 Score = 50.5 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%)

Query: 190 YHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD 249
             RG++Y P D L   GL  E    G+ +++    +K   +    +  +A   +  +   
Sbjct: 1   ARRGRIYLPQDELAQAGLSDEDIFDGKVTEKWRSFMKNQIKRARMFFQQAEAGVTELNRA 60

Query: 250 VFP 252
              
Sbjct: 61  SRW 63


>gi|30024617|dbj|BAC75675.1| putative phytoene synthase [Gordonia sp. TM414]
          Length = 303

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/239 (10%), Positives = 45/239 (18%), Gaps = 24/239 (10%)

Query: 27  NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPI---TRDMRLQWWKDI 83
            +R       LA  L  P  R  +  +Y        + D  R       R   L   +D 
Sbjct: 28  VIRSYSSSFGLASRLLAPAIRRDVRNIYALVRVADEIVDAPRPEQGLVDRSNELDQLEDQ 87

Query: 84  FESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN-----DSIFDCKQ 138
             +    +   S +          R+  +       ++    F                 
Sbjct: 88  TSA--AMITGSSSNLVVHAFARTARRVGIDLDLAGAVLRLDAFRPDRGRARLREPGVLHL 145

Query: 139 FEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFP 198
                 R                            G A      +               
Sbjct: 146 RLCRGRRPHVPARVPRRRGESRSALRPPRARRARLGAAFQKINFLRDFGEDSD------- 198

Query: 199 LDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPV 257
                  GL R   +          A  ++ +     L  A   + ++      A    
Sbjct: 199 -------GLGRRYLVGLDPDSPDDAAWSLWLDDIDLDLTAAAAAIPHLPASSRVAVCTA 250


>gi|323451825|gb|EGB07701.1| hypothetical protein AURANDRAFT_2849 [Aureococcus anophagefferens]
          Length = 316

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 67/292 (22%), Gaps = 54/292 (18%)

Query: 24  VLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDI 83
               L  +           P    I +   Y     L  V D          RL   +  
Sbjct: 1   CNDMLCKVSRSFAAVIQQLPAGCCIDICVFYLVLRALDTVEDDMT---YYKGRLDVKQAE 57

Query: 84  FESSTKGLIAESISP------------FSVELLSIVRQYDLPNQYFLDMIEAHFFDSYND 131
             S  +  +    +P               +  ++ R +    +   D+I+         
Sbjct: 58  LRSFHEARLMNPDAPPIMGCGEGDERVLLEQFGAVARVFATLPKESRDVIKDITDKMGGG 117

Query: 132 S-----------IFDCKQFEHYAFRISSRLIHLATMILDSERYSA----------SLRVI 170
                         D   +  Y   ++  +    T I     Y +               
Sbjct: 118 MADYVTADLVQGTKDEDAYNLYCHNVAGLVGEGLTGIFVGRGYESEELAEGGLLKWPFCG 177

Query: 171 KY--------AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVG--------LDRESFLS 214
           +          G+      +I      Y  G+ ++P  +                 + L 
Sbjct: 178 EDNKLGLANSMGLFLQKTNIIRDYLEDYVDGRAFWPKTVWSKHATTGDLGDFTRPCARLG 237

Query: 215 GQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAFIPVSITESVL 264
              SDR    +       L+ +  A + +  I          IP  +  + L
Sbjct: 238 KGASDRALACLDELIADALELVPDALKYLEKIKTPEVYRFCAIPQVMAIATL 289


>gi|254393713|ref|ZP_05008835.1| phytoene synthase [Streptomyces clavuligerus ATCC 27064]
 gi|197707322|gb|EDY53134.1| phytoene synthase [Streptomyces clavuligerus ATCC 27064]
          Length = 216

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 25/103 (24%), Gaps = 18/103 (17%)

Query: 34  DRYLACLLSPPLYRISLSFLYYFHTELMRVRDT---------------ARNPITRDMRLQ 78
           +  +A    P  +R  L  LY +   +  + D                      R   L 
Sbjct: 28  NFPVAPFFLPRAWRHDLMALYGYARLVDDIGDGDLAPGGGDARLLGVPPEAADDRLALLD 87

Query: 79  WWKDIFESSTKGLIA---ESISPFSVELLSIVRQYDLPNQYFL 118
             +                   P    L S VR   L  + FL
Sbjct: 88  ALEADLRRVFDPAPGGVPGPRHPLLRALRSPVRDRSLTIEPFL 130


>gi|308802854|ref|XP_003078740.1| FDFT_NICBE Farnesyl-diphosphate farnesyltransferase (ISS)
           [Ostreococcus tauri]
 gi|116057193|emb|CAL51620.1| FDFT_NICBE Farnesyl-diphosphate farnesyltransferase (ISS)
           [Ostreococcus tauri]
          Length = 210

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/175 (9%), Positives = 44/175 (25%), Gaps = 15/175 (8%)

Query: 18  SRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRL 77
             +  +    L  +     +         R ++   Y     L  V D    PI    +L
Sbjct: 33  DANLAYCYDVLNKVSRSFAIVIQQLDEELRDAVCVFYLALRALDTVEDDMSIPID--EKL 90

Query: 78  QWWKDIFESSTKGLIAES-----ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSY--- 129
               D  E       +            +    +   +    + + D+I           
Sbjct: 91  PQLYDFHEYIFDPKYSTECGEKHYRDLMMNYPRVTSVFLKLKKPYRDVIADIARRMGAGM 150

Query: 130 ----NDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKY-AGIAQFI 179
                  + D   F+ Y   ++  +    + +  + +  +   + +     A  +
Sbjct: 151 AKFIEKEVMDMSDFDEYCHYVAGLVGIGLSNLWGASKMESEEFIGEEKLSNAMGL 205


>gi|28864259|gb|AAO48602.1| ERG9 [Clavispora lusitaniae]
          Length = 209

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 57/198 (28%), Gaps = 25/198 (12%)

Query: 69  NPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMI------- 121
              T  + L+ W     +       E      VE   I+ ++      + D++       
Sbjct: 1   EVSTEKLSLKDW-----NFDGNGPNEKDRIVLVEFHHILTEFHKLRPEYQDIVKKITKKM 55

Query: 122 -EAHFFDSYNDSI-----FDCKQFEHYAFRISSRLI------HLATMILDSERYSASLRV 169
                    +++         K F+ Y   ++  +        +     D++  + + R+
Sbjct: 56  GNGMADYILDENFNTNGLETVKDFDLYCHYVAGLVGEGLSDLLVLARFADNQVQAENYRL 115

Query: 170 IKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAV-GLDRESFLSGQNSDRISLAIKIF 228
            +  G+      +I         G+ ++P +I           F   +  ++    I   
Sbjct: 116 SESMGLFLQKTNIIRDYHEDLEDGRSFYPREIWSKYTDSLPNFFKKPEEREKGVECINDL 175

Query: 229 AELGLKYLFKAREEMRYI 246
               L ++      +  I
Sbjct: 176 VLNALNHVIDVLTYLSLI 193


>gi|307323794|ref|ZP_07603003.1| hypothetical protein StrviDRAFT_0687 [Streptomyces violaceusniger
           Tu 4113]
 gi|306890243|gb|EFN21220.1| hypothetical protein StrviDRAFT_0687 [Streptomyces violaceusniger
           Tu 4113]
          Length = 175

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/127 (10%), Positives = 34/127 (26%), Gaps = 1/127 (0%)

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRIS-SRLIHLATMILDSERYSA 165
           +  +        D ++A   +           ++ Y    +    + +A +I   +    
Sbjct: 25  ISAHPGLRDRIEDFLDAAPLELEFTGFATEADYQRYVDAYALPAFMLIAGLIAGEDTPVG 84

Query: 166 SLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAI 225
                +           +  L      G+L    + L A G+ R    + +++  I    
Sbjct: 85  YREACRVYIDGSQRLDFVNDLSEDLADGRLNLVRETLDAHGVTRVDLENARDATGIRSLP 144

Query: 226 KIFAELG 232
                  
Sbjct: 145 AHLLGQA 151


>gi|194390506|dbj|BAG62012.1| unnamed protein product [Homo sapiens]
          Length = 174

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/174 (9%), Positives = 51/174 (29%), Gaps = 15/174 (8%)

Query: 46  YRISLSFLYYFHTELMRVRDTARNPITRDMRLQ----------WWKDIFESSTKGLIAES 95
            R ++   Y     L  + D     + + + L            W+ +        + E 
Sbjct: 1   MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSSLYQPDWRFMESKEKDRQVLED 60

Query: 96  ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
               S+E  ++  +Y          +     +  +  +   ++++ Y   ++  +    +
Sbjct: 61  FPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLS 120

Query: 156 MILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGA 204
            +  +  +   L           G+      +I         G+ ++P ++   
Sbjct: 121 RLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSR 174


>gi|5923857|gb|AAD56387.1|AF181557_1 squalene synthase [Artemisia annua]
          Length = 124

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/124 (11%), Positives = 37/124 (29%), Gaps = 7/124 (5%)

Query: 142 YAFRISSRLIHLATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH---RGQLY 196
           Y   ++  +    + +  S       S  +    G+      +I       +   + +++
Sbjct: 1   YCHYVAGLVGIGLSKLFHSSGTEILFSDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMF 60

Query: 197 FPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI--LPDVFPAF 254
           +P +I        E     +NS++    +       L ++    + M  +          
Sbjct: 61  WPREIWSKYVNKLEDLKYEENSEKAVQCLNDMVTNALIHIEDCLKYMSQLKDPAIFRFCA 120

Query: 255 IPVS 258
           IP  
Sbjct: 121 IPQV 124


>gi|73993619|ref|XP_856603.1| PREDICTED: similar to Farnesyl-diphosphate farnesyltransferase
           (Squalene synthetase) (SQS) (SS) (FPP:FPP
           farnesyltransferase) isoform 3 [Canis familiaris]
          Length = 385

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/188 (7%), Positives = 47/188 (25%), Gaps = 15/188 (7%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
            + ++   S       + L                  R ++   Y     L  + D    
Sbjct: 29  PKMDQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTI 88

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + L            W+ +        + E     S+E  ++  +Y         
Sbjct: 89  SVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICR 148

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASL-----RVIKYAG 174
            +     +  +  +   ++++ Y   ++  +    + +  +      L           G
Sbjct: 149 KMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASELEDPLVGEDIECANSMG 208

Query: 175 IAQFIGQL 182
           +       
Sbjct: 209 LFLQKTNY 216


>gi|330813666|ref|YP_004357905.1| phytoene synthase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486761|gb|AEA81166.1| phytoene synthase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 90

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 12/39 (30%)

Query: 27 NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           L       Y A L  P       S LY F   L  + D
Sbjct: 6  LLSKHAKTFYWAGLFLPKDALKKCSHLYDFCRTLDDIAD 44


>gi|19550339|gb|AAL91344.1| squalene synthase [Cricetulus griseus]
          Length = 175

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 41/152 (26%), Gaps = 10/152 (6%)

Query: 10  TRKEEKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARN 69
           T+ ++   S       + L                  R ++   Y     L  V D    
Sbjct: 18  TKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEIRHAVCVFYLVLRALDTVEDDMSI 77

Query: 70  PITRDMRLQ----------WWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLD 119
            + + + +            W+    +     + E     S+E  ++  +Y         
Sbjct: 78  SVEKKVPMLRNFHTFLYEPEWRFTESTQKDRQVLEDFPTISLEFRNLAEKYQTVIADICQ 137

Query: 120 MIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
            +     +  +  +   + ++ Y   ++  + 
Sbjct: 138 KMGCGMAEFVDKHVTSKQDWDKYCHYVAGLVG 169


>gi|260786797|ref|XP_002588443.1| hypothetical protein BRAFLDRAFT_198742 [Branchiostoma floridae]
 gi|229273605|gb|EEN44454.1| hypothetical protein BRAFLDRAFT_198742 [Branchiostoma floridae]
          Length = 246

 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/150 (10%), Positives = 38/150 (25%), Gaps = 8/150 (5%)

Query: 141 HYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQL 195
            Y   ++  +    + +     +   L           G+      +I         G+ 
Sbjct: 1   QYCHYVAGLVGIGLSRLFSGSEFEDELVGEDTDLANSMGLFLQKTNIIRDYLEDQVDGRE 60

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF--PA 253
           ++P  +          F   + S      +       L ++    + M  +         
Sbjct: 61  FWPRQVWSKHAKKLSDFRQPEMSQNALWCLNELVTNALLHVPDVLKYMSRLRNQSVFNFC 120

Query: 254 FIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
            IP  +  + L    N+  K+        +
Sbjct: 121 AIPQVMAIATLARCYNNP-KVFRGVVKIRK 149


>gi|95118478|gb|ABF57213.1| squalene synthase [Ganoderma lucidum]
 gi|95118480|gb|ABF57214.1| squalene synthase [Ganoderma lucidum]
          Length = 467

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/310 (9%), Positives = 71/310 (22%), Gaps = 38/310 (12%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDM-RLQW 79
                  L                     +   Y     L  + D    P  +    L+ 
Sbjct: 49  MRRCWEFLDQTSRSFSGVIKEVEGDLARVICLFYLVLRGLDTIEDDMTLPDEKKQPILRQ 108

Query: 80  WKDIF----ESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN----- 130
           +  +      +  +    E      VE   +  + +  +  + D+I              
Sbjct: 109 FHKLAVKPGWTFDECGPKEKDRQLLVEWTVVSEELNRLDACYRDIIIDIAEKMQTGMADY 168

Query: 131 ---------DSIFDCKQFEHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIA 176
                      I    ++  Y   ++  +    T    +    A     +       G+ 
Sbjct: 169 AHKAATTNSIYIGTVDEYNLYCHYVAGLVGEGLTRFWAASGKEAEWLGDQLELTNAMGLM 228

Query: 177 QFIGQLICQLPIHYHRGQLYFPLDILGAVGL-----------DRESFLSGQNSDRISLAI 225
                +I          + ++P +I G               +        N  +     
Sbjct: 229 LQKTNIIRDFREDAEERRFFWPREIWGRDAYGKAVGRANGFREMHELYERGNEKQALWVQ 288

Query: 226 KIFAELGLKYLFKAREEMRYILPDVFPAF--IPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
                  L +   + + +R +       F  IP ++  + L       + +  +     +
Sbjct: 289 SGMVVDVLGHATDSLDYLRLLTKQSIFCFCAIPQTMAMATLS-LCFMNYDMFHNHIKIRR 347

Query: 284 LVRPWYMLSS 293
                 ++ S
Sbjct: 348 AEAASLIMRS 357


>gi|169827705|ref|YP_001697863.1| hypothetical protein Bsph_2162 [Lysinibacillus sphaericus C3-41]
 gi|168992193|gb|ACA39733.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 246

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/239 (8%), Positives = 56/239 (23%), Gaps = 41/239 (17%)

Query: 49  SLSFLYYFHTELMRVRD-TARNPITRDMRLQWWKDIFESSTKGL-------IAESISPF- 99
           S++  Y     +  + D    +   +   L    D+ + +              +  P  
Sbjct: 9   SVAAAYLAMRAIDEIEDHEQLSNDVKFDLLSATSDLLKDTFNNEAYQELVAPYAAQLPEV 68

Query: 100 ------SVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
                  +       +  +             +   N  +   +  + Y + ++  +  +
Sbjct: 69  TLRLADWLAFCPEESRKIVQASTSEMAFGMAKWAKANWQVHTREDLDDYTYYVAGLVGTM 128

Query: 154 ATMIL-DSERYSASLRVIKYAGIAQFIGQLICQLPIHY-HRGQLYFPLDILGAVGLDRES 211
            + +            +    G       ++         RG  + P             
Sbjct: 129 LSELWAWGADIQTDRDLAIGYGRGLQAVNILRNQHEDMDERGVSFVPDGWTRE------- 181

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPD--VFPAFIPVSITESVLKHAQ 268
                                 + L KA   M+ I     +    +P+++    LK  Q
Sbjct: 182 ---------------DLFTYAEENLAKADLYMKDINKRTVLLFCRLPLALAHKTLKAMQ 225


>gi|126654415|ref|ZP_01726158.1| hypothetical protein BB14905_22093 [Bacillus sp. B14905]
 gi|126589135|gb|EAZ83325.1| hypothetical protein BB14905_22093 [Bacillus sp. B14905]
          Length = 199

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/184 (7%), Positives = 46/184 (25%), Gaps = 20/184 (10%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWW 80
               ++ L+D     Y+         ++S++  Y     +  + D     ++ D++    
Sbjct: 18  YKEAMQVLKDTSRTFYIPITFLKNDLKVSVAAAYLAMRAIDEIED--HEQLSNDVKFDLL 75

Query: 81  KDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS------------ 128
               +        E+         + + +  L    +L                      
Sbjct: 76  SATSDLLKDTFNDEAYQELLAPYAAQLPEVTLRLADWLTFCPEESRKIVQASTSEMAFGM 135

Query: 129 -----YNDSIFDCKQFEHYAFRISSRLIHLATMIL-DSERYSASLRVIKYAGIAQFIGQL 182
                 N  +   +  + Y + ++  +  + + +            +    G       +
Sbjct: 136 AKWSKANWQVHTREDLDDYTYYVAGLVGTMLSELWAWGADIQTDRDLAIGYGRGLQAVNI 195

Query: 183 ICQL 186
           +   
Sbjct: 196 LRNQ 199


>gi|162448700|ref|YP_001611067.1| hypothetical protein sce0430 [Sorangium cellulosum 'So ce 56']
 gi|161159282|emb|CAN90587.1| unnamed protein product [Sorangium cellulosum 'So ce 56']
          Length = 333

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 69/257 (26%), Gaps = 19/257 (7%)

Query: 41  LSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFS 100
           L+P + R  L  +  +   + R+            R   +   +         +   PF+
Sbjct: 58  LAPDVKRAWLDRIR-WIRIVDRLA-ENERIEPHARRFSRFMVAWRRVRSCGFVDPCCPFA 115

Query: 101 VEL---------LSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLI 151
            EL            + + DL       +     +                     + L+
Sbjct: 116 RELSAIHALWLRRPALDRPDLDEMQPRSLAAWDAYLLALADYHAPSLLIRTLKEHDTMLV 175

Query: 152 HLATMILDSERYSASLRVIKY--AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDR 209
            L+  I     +            G        +  +     RG  Y P + L   G+ R
Sbjct: 176 RLSGHIFQLVPFLTKEHWDAAGEFGRLDQFFNNLRDMQEDADRGICYLPEEELARHGVAR 235

Query: 210 ESFLSGQ--NSDRISLAIKIFAELGL-KYLFKAREEM--RYILPDVFPAF-IPVSITESV 263
              +SG+  ++      ++ + +  +     +A   +  R + P +       +     +
Sbjct: 236 AQVISGRCVDTPGYQALMRYWLDEVMPALYARAAPFIEARGLHPSLQIMREWSLRRYARI 295

Query: 264 LKHAQNHGFKIVSHSHT 280
            +  +  GF        
Sbjct: 296 TRVFRATGFDHRRFPAR 312


>gi|224613318|gb|ACN60238.1| Squalene synthetase [Salmo salar]
          Length = 250

 Score = 47.0 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/161 (6%), Positives = 40/161 (24%), Gaps = 8/161 (4%)

Query: 140 EHYAFRISSRLIHLATMILDSERYSASLRVIK-----YAGIAQFIGQLICQLPIHYHRGQ 194
           + Y   ++  +    + +  + +                G+      +I          +
Sbjct: 1   DQYCHYVAGLVGIGLSQLFSASQLEDPEVGKDTELANSMGLFLQKTNIIRDYLEDIQVAR 60

Query: 195 LYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVF--P 252
            ++P +         E              + +     L+++      +  +        
Sbjct: 61  AFWPQEAWSQFACRLEDLAEPDQLTSALSCLNLLVTDALRHVPDVITYLARLRNQSVFNF 120

Query: 253 AFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
             IP  +  + L    N+  ++        +      M+ +
Sbjct: 121 CAIPQVMAIATLSACYNNP-QVFQGVVKIRKGQAVTLMMQA 160


>gi|129920612|gb|ABO31823.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920616|gb|ABO31825.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920618|gb|ABO31826.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920620|gb|ABO31827.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920622|gb|ABO31828.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920624|gb|ABO31829.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920626|gb|ABO31830.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920628|gb|ABO31831.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920630|gb|ABO31832.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920632|gb|ABO31833.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920634|gb|ABO31834.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920636|gb|ABO31835.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920638|gb|ABO31836.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920640|gb|ABO31837.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920642|gb|ABO31838.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920644|gb|ABO31839.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920646|gb|ABO31840.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920648|gb|ABO31841.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920650|gb|ABO31842.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920652|gb|ABO31843.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920656|gb|ABO31845.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920658|gb|ABO31846.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920660|gb|ABO31847.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920662|gb|ABO31848.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920664|gb|ABO31849.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920666|gb|ABO31850.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920668|gb|ABO31851.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920670|gb|ABO31852.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920672|gb|ABO31853.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920674|gb|ABO31854.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920676|gb|ABO31855.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920678|gb|ABO31856.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920680|gb|ABO31857.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920682|gb|ABO31858.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920684|gb|ABO31859.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920686|gb|ABO31860.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920688|gb|ABO31861.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920690|gb|ABO31862.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920692|gb|ABO31863.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920694|gb|ABO31864.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920696|gb|ABO31865.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920698|gb|ABO31866.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920700|gb|ABO31867.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920704|gb|ABO31869.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920706|gb|ABO31870.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920708|gb|ABO31871.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920710|gb|ABO31872.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920712|gb|ABO31873.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920714|gb|ABO31874.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920716|gb|ABO31875.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920718|gb|ABO31876.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920720|gb|ABO31877.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920722|gb|ABO31878.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920724|gb|ABO31879.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
 gi|129920734|gb|ABO31884.1| phytoene synthase [Triticum aestivum]
 gi|129920736|gb|ABO31885.1| phytoene synthase [Triticum aestivum]
 gi|129920738|gb|ABO31886.1| phytoene synthase [Triticum aestivum]
 gi|129920740|gb|ABO31887.1| phytoene synthase [Triticum aestivum]
 gi|129920742|gb|ABO31888.1| phytoene synthase [Triticum aestivum]
 gi|129920744|gb|ABO31889.1| phytoene synthase [Triticum aestivum]
 gi|129920746|gb|ABO31890.1| phytoene synthase [Triticum aestivum]
 gi|129920748|gb|ABO31891.1| phytoene synthase [Triticum aestivum]
 gi|129920750|gb|ABO31892.1| phytoene synthase [Triticum aestivum]
 gi|129920752|gb|ABO31893.1| phytoene synthase [Triticum aestivum]
 gi|129920754|gb|ABO31894.1| phytoene synthase [Triticum aestivum]
 gi|129920756|gb|ABO31895.1| phytoene synthase [Triticum aestivum]
 gi|129920758|gb|ABO31896.1| phytoene synthase [Triticum aestivum]
 gi|129920760|gb|ABO31897.1| phytoene synthase [Triticum aestivum]
 gi|129920762|gb|ABO31898.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920764|gb|ABO31899.1| phytoene synthase [Triticum aestivum]
 gi|129920766|gb|ABO31900.1| phytoene synthase [Triticum aestivum]
 gi|129920768|gb|ABO31901.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920770|gb|ABO31902.1| phytoene synthase [Triticum aestivum]
 gi|129920772|gb|ABO31903.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
 gi|129920774|gb|ABO31904.1| phytoene synthase [Triticum aestivum]
 gi|129920776|gb|ABO31905.1| phytoene synthase [Triticum aestivum]
 gi|129920778|gb|ABO31906.1| phytoene synthase [Triticum aestivum]
 gi|129920780|gb|ABO31907.1| phytoene synthase [Triticum aestivum]
 gi|129920782|gb|ABO31908.1| phytoene synthase [Triticum aestivum]
 gi|129920784|gb|ABO31909.1| phytoene synthase [Triticum aestivum]
 gi|129920786|gb|ABO31910.1| phytoene synthase [Triticum aestivum]
 gi|129920788|gb|ABO31911.1| phytoene synthase [Triticum aestivum]
 gi|129920790|gb|ABO31912.1| phytoene synthase [Triticum aestivum]
 gi|129920792|gb|ABO31913.1| phytoene synthase [Triticum aestivum]
 gi|129920794|gb|ABO31914.1| phytoene synthase [Triticum aestivum]
 gi|129920796|gb|ABO31915.1| phytoene synthase [Triticum aestivum]
 gi|129920798|gb|ABO31916.1| phytoene synthase [Triticum aestivum]
 gi|129920800|gb|ABO31917.1| phytoene synthase [Triticum aestivum]
 gi|129920802|gb|ABO31918.1| phytoene synthase [Triticum aestivum]
 gi|129920804|gb|ABO31919.1| phytoene synthase [Triticum turgidum subsp. durum]
 gi|129920806|gb|ABO31920.1| phytoene synthase [Triticum aestivum]
 gi|129920808|gb|ABO31921.1| phytoene synthase [Triticum aestivum]
 gi|129920810|gb|ABO31922.1| phytoene synthase [Triticum aestivum]
 gi|129920812|gb|ABO31923.1| phytoene synthase [Triticum aestivum]
 gi|129920814|gb|ABO31924.1| phytoene synthase [Triticum aestivum]
 gi|129920816|gb|ABO31925.1| phytoene synthase [Triticum aestivum]
 gi|129920818|gb|ABO31926.1| phytoene synthase [Triticum aestivum]
 gi|129920820|gb|ABO31927.1| phytoene synthase [Triticum aestivum]
 gi|129920822|gb|ABO31928.1| phytoene synthase [Triticum aestivum]
          Length = 83

 Score = 47.0 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 5/83 (6%)

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SA 165
            +  Q F DMIE    D +        +   Y + ++  +  +   ++           +
Sbjct: 1   PIDIQPFRDMIEGMRLDLWKSRYMTFDELYLYCYYVAGTVGLMTVPVMGIAPDSKASAES 60

Query: 166 SLRVIKYAGIAQFIGQLICQLPI 188
                   GIA  +  ++  +  
Sbjct: 61  VYNAALALGIANQLTNILRDVGE 83


>gi|307111654|gb|EFN59888.1| hypothetical protein CHLNCDRAFT_18492 [Chlorella variabilis]
          Length = 261

 Score = 47.0 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 10/148 (6%)

Query: 21  SLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTAR-NPITRDMRLQW 79
             F    L  +     +     P   R ++   Y     L  V D    +P  +   L+ 
Sbjct: 36  LAFCYDMLNRVSRSFAIVIQQLPHGLRDAVCVFYLVLRALDTVEDDMGLDPKVKVPLLRC 95

Query: 80  WKDIFESSTKGLIAESISPFSVELLSIV---------RQYDLPNQYFLDMIEAHFFDSYN 130
           + +     +  +   S     +     +         ++Y          + A   D   
Sbjct: 96  FHEKSYDRSWKMSCGSGEYVRLMENYPLVTDVFQGLDKRYQQVIADICKKMGAGMADFVT 155

Query: 131 DSIFDCKQFEHYAFRISSRLIHLATMIL 158
               D + +  Y   ++  +    + + 
Sbjct: 156 ADAADVEDYNLYCHYVAGLVGIGLSHLF 183


>gi|129920654|gb|ABO31844.1| phytoene synthase [Triticum timopheevii subsp. armeniacum]
 gi|129920726|gb|ABO31880.1| phytoene synthase [Triticum timopheevii subsp. armeniacum]
 gi|129920728|gb|ABO31881.1| phytoene synthase [Triticum timopheevii subsp. armeniacum]
 gi|129920730|gb|ABO31882.1| phytoene synthase [Triticum timopheevii subsp. armeniacum]
 gi|129920732|gb|ABO31883.1| phytoene synthase [Triticum timopheevii subsp. armeniacum]
          Length = 83

 Score = 46.6 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 5/83 (6%)

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SA 165
            +  Q F DMIE    D +        +   Y + ++  +  +   ++           +
Sbjct: 1   PIDIQPFRDMIEGMRLDLWKSRYRTFDELYLYCYYVAGTVGLMTVPVMGIAPDSKASAES 60

Query: 166 SLRVIKYAGIAQFIGQLICQLPI 188
                   GIA  +  ++  +  
Sbjct: 61  VYNAALALGIANQLTNILRDVGE 83


>gi|315498263|ref|YP_004087067.1| squalene/phytoene synthase [Asticcacaulis excentricus CB 48]
 gi|315416275|gb|ADU12916.1| Squalene/phytoene synthase [Asticcacaulis excentricus CB 48]
          Length = 232

 Score = 46.6 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 63/256 (24%), Gaps = 52/256 (20%)

Query: 37  LACLLS-PPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAES 95
           LA         R  +  L  F   L  V      P+  D+R  WW +  E          
Sbjct: 21  LAAQFIEDAQKRADVLALLAFAEVLRDVPARVSEPLLGDIRYTWWGEALEEIRDRRKV-R 79

Query: 96  ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
             P S  L  +  ++ L  +  +D I+ H                            L+ 
Sbjct: 80  YHPLSAALAGVAERHALDMKALIDAIDPHRLQLD---------------------GRLSL 118

Query: 156 MILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSG 215
               S        ++  A                    ++      L  + +        
Sbjct: 119 RDALSVADQGQAVILVQAAKVL-------DATADAACLRIPARFQTLATLKVVGRL---- 167

Query: 216 QNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIV 275
                   A +  AE G     +AR+ ++ +   + P  +P ++              + 
Sbjct: 168 -------NAEEAGAEEGRHLYREARQGLKRVPSILLPLVLPAAVA-----------ADLW 209

Query: 276 SHSHTPNQLVRPWYML 291
                    VR   + 
Sbjct: 210 HGRVRGALSVRLKLLW 225


>gi|329850436|ref|ZP_08265281.1| squalene [Asticcacaulis biprosthecum C19]
 gi|328840751|gb|EGF90322.1| squalene [Asticcacaulis biprosthecum C19]
          Length = 224

 Score = 46.6 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 2/95 (2%)

Query: 37  LACLLSP-PLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAES 95
           LAC   P    R  +  L+     +  + +     +  ++RL+WW + FE+  +G     
Sbjct: 15  LACAFIPDVERRAGVLALFALLETVREIPERVTEALMGEIRLRWWYEAFEAIGQGRTPH- 73

Query: 96  ISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYN 130
             P +     ++  Y LP + FL +IEA       
Sbjct: 74  YHPLTELFQRLIPLYGLPVETFLALIEAQMPLLDK 108


>gi|129920702|gb|ABO31868.1| phytoene synthase [Triticum turgidum subsp. dicoccoides]
          Length = 83

 Score = 46.6 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 5/83 (6%)

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSA 165
            +  Q F DMIE    D +        +   Y + ++  +  +   ++           +
Sbjct: 1   PIDIQPFRDMIEGMRLDLWKSRYMTFDELYLYCYYVAGTVGLMTVPVMGIALDSKASAES 60

Query: 166 SLRVIKYAGIAQFIGQLICQLPI 188
                   GIA  +  ++  +  
Sbjct: 61  VYNAALALGIANQLTNILRDVGE 83


>gi|149436729|ref|XP_001513105.1| PREDICTED: similar to FDFT1 protein [Ornithorhynchus anatinus]
          Length = 185

 Score = 46.2 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/124 (10%), Positives = 35/124 (28%), Gaps = 3/124 (2%)

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G+      +I         G+ ++P ++          F + +N D     +      
Sbjct: 15  SMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRYAKQLSDFANPENVDLAVQCLNELVTN 74

Query: 232 GLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
            L ++      +  +          IP  +  + L  A  +  ++        +      
Sbjct: 75  ALHHVPDVLTYLSRLRNQSIFNFCAIPQVMAIATL-AACYNNQQVFRRVVKIRKGQAVTL 133

Query: 290 MLSS 293
           M+ +
Sbjct: 134 MMGA 137


>gi|129920614|gb|ABO31824.1| phytoene synthase [Triticum turgidum subsp. dicoccon]
          Length = 83

 Score = 45.1 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 5/83 (6%)

Query: 111 DLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERY-----SA 165
            +  Q F DMIE    D +        +   Y +  +  +  +   ++           +
Sbjct: 1   PIDIQPFRDMIEGMRLDLWKSRYMTFDELYLYCYYXAGTVGLMTVPVMGIAPDSKASAES 60

Query: 166 SLRVIKYAGIAQFIGQLICQLPI 188
                   GIA  +  ++  +  
Sbjct: 61  VYNAALALGIANQLTNILRDVGE 83


>gi|145590660|ref|YP_001152662.1| hypothetical protein Pars_0410 [Pyrobaculum arsenaticum DSM 13514]
 gi|145282428|gb|ABP50010.1| hypothetical protein Pars_0410 [Pyrobaculum arsenaticum DSM 13514]
          Length = 102

 Score = 45.1 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
            +  + + +  L P   R  ++ LY F   +  + D  R        ++ +   +     
Sbjct: 10  RVGRNFFYSSGLFPRAVRDEVAVLYAFVRYVDDLVDRPRP------LVEHFYRAWRLLDA 63

Query: 90  GLIAESISPFSVELLSIVRQYDLP 113
            L      P   +   +  +  +P
Sbjct: 64  ALDGRVRPPVIGDFAELAARRGMP 87


>gi|295656914|ref|XP_002789035.1| squalene synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226285031|gb|EEH40597.1| squalene synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 258

 Score = 45.1 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/110 (10%), Positives = 27/110 (24%), Gaps = 3/110 (2%)

Query: 176 AQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKY 235
                 +I  +   +   + ++P +I        E     +N               L +
Sbjct: 3   CSQKTNIIRDVKEDHVDKRCFWPKEIWSKHVDQFEDLFKPENRTVALNCNAEMILNALDH 62

Query: 236 LFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQ 283
             +    +  +          IP S+  + L         I   +    +
Sbjct: 63  ADECLFYLAGLKEQSIFNFCAIPQSMAIATL-ELCFRNEAIFERNVKITK 111


>gi|296284149|ref|ZP_06862147.1| hypothetical protein CbatJ_11011 [Citromicrobium bathyomarinum
           JL354]
          Length = 225

 Score = 44.7 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 30  DIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTK 89
             D    LA   +P   R     L+     L      A  PI   ++L WW+D F     
Sbjct: 13  AADPSLTLALAYAPRDARPVFDDLFALDRRLADAVRQASEPIIAQLKLAWWRDRFAQDRS 72

Query: 90  GLIAESISPFSVELLSI 106
                   P    L + 
Sbjct: 73  DWPKGE--PLLARLAAW 87


>gi|311306886|gb|ADP89473.1| squalene synthase [Betula platyphylla]
          Length = 148

 Score = 44.3 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/145 (9%), Positives = 35/145 (24%), Gaps = 12/145 (8%)

Query: 60  LMRVRDTARNP-ITRDMRLQWWKDIFESSTKGLIA---------ESISPFSVELLSIVRQ 109
           L  V D    P   +   L+ +                      +     S   L + + 
Sbjct: 2   LDTVEDDTSIPTDVKVPILKAFHRHIYDCEWHFSCGTKEYKVLMDQFHHVSTAFLELEKS 61

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYS--ASL 167
           Y    +     + A         +     ++ Y   ++  +    + +  +      AS 
Sbjct: 62  YQEAIEEITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGSEDLASD 121

Query: 168 RVIKYAGIAQFIGQLICQLPIHYHR 192
            +    G+      +I       + 
Sbjct: 122 HLSNSMGLFLQKTNIIRDYLEDINE 146


>gi|84874998|emb|CAJ57434.1| phytoene synthase [Solanum lycopersicum]
          Length = 75

 Score = 43.9 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 5/75 (6%)

Query: 119 DMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMIL-----DSERYSASLRVIKYA 173
           DM++    D +     +  +   Y + ++  +  ++  I+           +        
Sbjct: 1   DMVDGMRMDLWKSRYNNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALAL 60

Query: 174 GIAQFIGQLICQLPI 188
           GIA  +  ++  +  
Sbjct: 61  GIANQLTNILSDVGE 75


>gi|320033290|gb|EFW15238.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 201

 Score = 43.5 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/112 (9%), Positives = 32/112 (28%), Gaps = 1/112 (0%)

Query: 173 AGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELG 232
            G       +I  +   Y   + ++P ++      +       QN ++          + 
Sbjct: 1   MGQLLQQTNIIRDIREDYDSKRYFWPEEVWSKYVENFSDLFLPQNREKALQCSSEMVLMA 60

Query: 233 LKYLFKAREEMRYILPDVFPAFIPVSITESVLK-HAQNHGFKIVSHSHTPNQ 283
           L    +    M  ++      F+ +  T ++           I   +   ++
Sbjct: 61  LTRADECLSYMAGVMEQSTFNFVAIPQTMAIATLELCLQNPAIFDRNIKISR 112


>gi|194377082|dbj|BAG63102.1| unnamed protein product [Homo sapiens]
          Length = 250

 Score = 43.5 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 32/116 (27%), Gaps = 3/116 (2%)

Query: 172 YAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAEL 231
             G+      +I         G+ ++P ++          F   +N D     +      
Sbjct: 39  SMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITN 98

Query: 232 GLKYLFKAREEMRYILPDVF--PAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLV 285
            L ++      +  +          IP  +  + L  A  +  ++   +    +  
Sbjct: 99  ALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL-AACYNNQQVFKGAVKIRKGQ 153


>gi|332186081|ref|ZP_08387827.1| hypothetical protein SUS17_1156 [Sphingomonas sp. S17]
 gi|332013896|gb|EGI55955.1| hypothetical protein SUS17_1156 [Sphingomonas sp. S17]
          Length = 230

 Score = 42.8 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 2/151 (1%)

Query: 33  YDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLI 92
            ++ LA   +    R   + L     +L  +  +   P+   MRL WW ++ E   +  +
Sbjct: 19  REQALAVGYASASAREGFAALLDLDHQLASILQSTTEPMIGQMRLTWWYEVLEKLDREPV 78

Query: 93  AESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
                P    L + V    +       MIE       +    D  + E +A      L  
Sbjct: 79  --PAHPVLQRLAASVLPSGVRGADLAPMIEGWEALLDDGEPLDDTRVERHAEARGGVLFA 136

Query: 153 LATMILDSERYSASLRVIKYAGIAQFIGQLI 183
               +L     +        A +AQ +  + 
Sbjct: 137 SIGRLLGQAGMAPLGAAWAKADLAQHVSDVA 167


>gi|32349422|gb|AAP56012.1| phytoene synthase [Zea mays]
 gi|32349458|gb|AAP56030.1| phytoene synthase [Zea mays]
 gi|32349462|gb|AAP56032.1| phytoene synthase [Zea mays]
 gi|32349468|gb|AAP56035.1| phytoene synthase [Zea mays]
 gi|32349470|gb|AAP56036.1| phytoene synthase [Zea mays]
 gi|32349472|gb|AAP56037.1| phytoene synthase [Zea mays]
 gi|32349500|gb|AAP56051.1| phytoene synthase [Zea mays]
 gi|32349504|gb|AAP56053.1| phytoene synthase [Zea mays]
 gi|32349516|gb|AAP56059.1| phytoene synthase [Zea mays]
 gi|32349522|gb|AAP56062.1| phytoene synthase [Zea mays]
 gi|32349524|gb|AAP56063.1| phytoene synthase [Zea mays]
 gi|32349552|gb|AAP56077.1| phytoene synthase [Zea mays]
 gi|32349554|gb|AAP56078.1| phytoene synthase [Zea mays]
 gi|32349560|gb|AAP56081.1| phytoene synthase [Zea mays]
 gi|32349564|gb|AAP56083.1| phytoene synthase [Zea mays]
          Length = 57

 Score = 42.4 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 6/60 (10%), Positives = 13/60 (21%), Gaps = 3/60 (5%)

Query: 56  FHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQ 115
           +      + D           L  W+   E                 L   + ++ +  Q
Sbjct: 1   WCRRTDELVDGPNANYITPTALDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQ 57


>gi|32349716|gb|AAP56159.1| phytoene synthase [Zea mays]
 gi|32349718|gb|AAP56160.1| phytoene synthase [Zea mays]
 gi|32349720|gb|AAP56161.1| phytoene synthase [Zea mays]
 gi|32349722|gb|AAP56162.1| phytoene synthase [Zea mays]
 gi|32349724|gb|AAP56163.1| phytoene synthase [Zea mays]
 gi|32349726|gb|AAP56164.1| phytoene synthase [Zea mays]
 gi|32349728|gb|AAP56165.1| phytoene synthase [Zea mays]
 gi|32349730|gb|AAP56166.1| phytoene synthase [Zea mays]
 gi|32349732|gb|AAP56167.1| phytoene synthase [Zea mays]
 gi|32349734|gb|AAP56168.1| phytoene synthase [Zea mays]
 gi|32349736|gb|AAP56169.1| phytoene synthase [Zea mays]
 gi|32349738|gb|AAP56170.1| phytoene synthase [Zea mays]
 gi|32349740|gb|AAP56171.1| phytoene synthase [Zea mays]
 gi|32349742|gb|AAP56172.1| phytoene synthase [Zea mays]
 gi|32349744|gb|AAP56173.1| phytoene synthase [Zea mays]
 gi|32349746|gb|AAP56174.1| phytoene synthase [Zea mays]
 gi|32349748|gb|AAP56175.1| phytoene synthase [Zea mays]
 gi|32349750|gb|AAP56176.1| phytoene synthase [Zea mays]
 gi|32349752|gb|AAP56177.1| phytoene synthase [Zea mays]
 gi|32349754|gb|AAP56178.1| phytoene synthase [Zea mays]
 gi|32349756|gb|AAP56179.1| phytoene synthase [Zea mays]
 gi|32349758|gb|AAP56180.1| phytoene synthase [Zea mays]
 gi|32349760|gb|AAP56181.1| phytoene synthase [Zea mays]
 gi|32349762|gb|AAP56182.1| phytoene synthase [Zea mays]
 gi|32349764|gb|AAP56183.1| phytoene synthase [Zea mays]
 gi|32349766|gb|AAP56184.1| phytoene synthase [Zea mays]
 gi|32349768|gb|AAP56185.1| phytoene synthase [Zea mays]
 gi|32349770|gb|AAP56186.1| phytoene synthase [Zea mays]
 gi|32349772|gb|AAP56187.1| phytoene synthase [Zea mays]
 gi|32349774|gb|AAP56188.1| phytoene synthase [Zea mays]
 gi|32349776|gb|AAP56189.1| phytoene synthase [Zea mays]
 gi|32349778|gb|AAP56190.1| phytoene synthase [Zea mays]
 gi|32349780|gb|AAP56191.1| phytoene synthase [Zea mays]
 gi|32349782|gb|AAP56192.1| phytoene synthase [Zea mays]
 gi|32349784|gb|AAP56193.1| phytoene synthase [Zea mays]
 gi|32349786|gb|AAP56194.1| phytoene synthase [Zea mays]
 gi|32349788|gb|AAP56195.1| phytoene synthase [Zea mays]
 gi|32349790|gb|AAP56196.1| phytoene synthase [Zea mays]
 gi|32349792|gb|AAP56197.1| phytoene synthase [Zea mays]
 gi|32349794|gb|AAP56198.1| phytoene synthase [Zea mays]
 gi|32349796|gb|AAP56199.1| phytoene synthase [Zea mays]
 gi|32349798|gb|AAP56200.1| phytoene synthase [Zea mays]
 gi|32349800|gb|AAP56201.1| phytoene synthase [Zea mays]
 gi|32349802|gb|AAP56202.1| phytoene synthase [Zea mays]
 gi|32349804|gb|AAP56203.1| phytoene synthase [Zea mays]
 gi|32349806|gb|AAP56204.1| phytoene synthase [Zea mays]
 gi|32349808|gb|AAP56205.1| phytoene synthase [Zea mays]
 gi|32349810|gb|AAP56206.1| phytoene synthase [Zea mays]
 gi|32349812|gb|AAP56207.1| phytoene synthase [Zea mays]
 gi|32349814|gb|AAP56208.1| phytoene synthase [Zea mays]
 gi|32349816|gb|AAP56209.1| phytoene synthase [Zea mays]
 gi|32349818|gb|AAP56210.1| phytoene synthase [Zea mays]
 gi|32349820|gb|AAP56211.1| phytoene synthase [Zea mays]
 gi|32349822|gb|AAP56212.1| phytoene synthase [Zea mays]
 gi|32349824|gb|AAP56213.1| phytoene synthase [Zea mays]
 gi|32349826|gb|AAP56214.1| phytoene synthase [Zea mays]
 gi|32349828|gb|AAP56215.1| phytoene synthase [Zea mays]
 gi|32349830|gb|AAP56216.1| phytoene synthase [Zea mays]
 gi|32349832|gb|AAP56217.1| phytoene synthase [Zea mays]
 gi|32349834|gb|AAP56218.1| phytoene synthase [Zea mays]
 gi|32349836|gb|AAP56219.1| phytoene synthase [Zea mays]
 gi|32349838|gb|AAP56220.1| phytoene synthase [Zea mays]
 gi|32349840|gb|AAP56221.1| phytoene synthase [Zea mays]
 gi|32349842|gb|AAP56222.1| phytoene synthase [Zea mays]
 gi|32349844|gb|AAP56223.1| phytoene synthase [Zea mays]
 gi|32349846|gb|AAP56224.1| phytoene synthase [Zea mays]
 gi|32349848|gb|AAP56225.1| phytoene synthase [Zea mays]
 gi|32349850|gb|AAP56226.1| phytoene synthase [Zea mays]
 gi|32349852|gb|AAP56227.1| phytoene synthase [Zea mays]
 gi|32349854|gb|AAP56228.1| phytoene synthase [Zea mays]
 gi|32349856|gb|AAP56229.1| phytoene synthase [Zea mays]
 gi|32349858|gb|AAP56230.1| phytoene synthase [Zea mays]
 gi|32349860|gb|AAP56231.1| phytoene synthase [Zea mays]
 gi|32349862|gb|AAP56232.1| phytoene synthase [Zea mays]
          Length = 48

 Score = 42.4 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 1/33 (3%), Positives = 10/33 (30%)

Query: 262 SVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSS 294
            +L   + + +   +      +  +   +  + 
Sbjct: 1   QILDEIEANDYNNFTKRAYVGKGKKLLALPVAY 33


>gi|7532841|gb|AAF63255.1| squalene synthase [Botryococcus braunii]
          Length = 126

 Score = 42.0 bits (97), Expect = 0.095,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 34/113 (30%), Gaps = 8/113 (7%)

Query: 142 YAFRISSRLIHLATMIL-----DSERYSASLRVIKYAGIAQFIGQLICQLPIHYHR---G 193
           Y   ++  +    + +       S   + S  +  + G+      +I       +     
Sbjct: 1   YCHYVAGVVGLGLSQLFVASGLQSPSLTRSEDLSNHMGLFLQKTNIIRDYFEDINELPAP 60

Query: 194 QLYFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYI 246
           ++++P +I G    +   F    N       +       L++     + M  I
Sbjct: 61  RMFWPREIWGKYANNLAEFKDPANKAAAMCCLNEMVTDALRHAVYCLQYMSMI 113


>gi|154498976|ref|ZP_02037354.1| hypothetical protein BACCAP_02968 [Bacteroides capillosus ATCC
           29799]
 gi|150271816|gb|EDM99042.1| hypothetical protein BACCAP_02968 [Bacteroides capillosus ATCC
           29799]
          Length = 544

 Score = 41.2 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 39/134 (29%), Gaps = 1/134 (0%)

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            +    Y   ++ +++    M    ++  A L              +   +P    +   
Sbjct: 291 HEALVSYEDFMAVKVMMQRDMRCSPDQDEAHLFSGFLFCGDCQQPMIRKTVPSKTKKYIY 350

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y       +      S  + +  +++  AI    EL +  L  A   +  +      AF 
Sbjct: 351 YVCSTNKHSRTCSPHSIAAKEVEEKVFRAIHDQIELVIN-LEHALAMIERLPSQSRKAFN 409

Query: 256 PVSITESVLKHAQN 269
             +    + +  + 
Sbjct: 410 YEAQIAKIGEEIER 423


>gi|158389697|gb|ABW37701.1| squalene synthase [Panax notoginseng]
          Length = 153

 Score = 40.8 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/111 (8%), Positives = 32/111 (28%), Gaps = 5/111 (4%)

Query: 94  ESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHL 153
           +     S   L +   Y    +     + A         +     ++ Y   ++  +   
Sbjct: 43  DEFHHVSNAFLDLGSGYKEAIEDITMRMGAGMSKFICKEVETIDDYDEYCHYVAGLVGLG 102

Query: 154 ATMILDSERYS--ASLRVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPL 199
            + +  +      A+  +    G+      +I       +   + ++++P 
Sbjct: 103 LSKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR 153


>gi|304321624|ref|YP_003855267.1| hypothetical protein PB2503_10369 [Parvularcula bermudensis
           HTCC2503]
 gi|303300526|gb|ADM10125.1| hypothetical protein PB2503_10369 [Parvularcula bermudensis
           HTCC2503]
          Length = 241

 Score = 40.4 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 31/103 (30%), Gaps = 5/103 (4%)

Query: 37  LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
           LA    P   R   +       EL  +   A +P+   +RLQWW +  E           
Sbjct: 25  LALPYWPEARRAQAAAFIDLAEELSLIPVKASDPMVARIRLQWWVETIEGM-HHGTQRPG 83

Query: 97  SPFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQF 139
            P    L +       P    + +++        DS  D    
Sbjct: 84  QPVLDALTASAA----PLSPLVSLVDEAVRLMEEDSRADRCPL 122


>gi|167824665|ref|ZP_02456136.1| phytoene synthase, putative [Burkholderia pseudomallei 9]
          Length = 33

 Score = 40.1 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 3/33 (9%), Positives = 13/33 (39%)

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
              +  GF+++        + + W    ++ ++
Sbjct: 1   DEIERDGFQVLHQRIALTPIRKLWIAWRAARRR 33


>gi|299140019|ref|ZP_07033189.1| squalene/phytoene synthase [Acidobacterium sp. MP5ACTX8]
 gi|298598019|gb|EFI54187.1| squalene/phytoene synthase [Acidobacterium sp. MP5ACTX8]
          Length = 66

 Score = 39.3 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 12/39 (30%)

Query: 27 NLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRD 65
           L+ +    Y+   + P   R  +   Y        + D
Sbjct: 13 LLKSVSRSFYITLRVLPVGMRDQIGLAYLLARATDTIAD 51


>gi|209520710|ref|ZP_03269460.1| putative phytoene synthase [Burkholderia sp. H160]
 gi|209498872|gb|EDZ98977.1| putative phytoene synthase [Burkholderia sp. H160]
          Length = 41

 Score = 38.5 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 2/29 (6%), Positives = 9/29 (31%)

Query: 265 KHAQNHGFKIVSHSHTPNQLVRPWYMLSS 293
              +  G+ ++        + + W    +
Sbjct: 12  DEIERDGYHVLHQRIALTPIRKLWIAWRA 40


>gi|307694503|ref|ZP_07636740.1| Recombinase [Ruminococcaceae bacterium D16]
          Length = 506

 Score = 38.5 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 39/134 (29%), Gaps = 1/134 (0%)

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            +    Y   ++ +++    M    ++  A L              +   +P    +   
Sbjct: 270 HEALVSYEDFMAVKVMMQRDMRCSPDQDEAHLFSGFLFCGDCQQPMIRKTVPSKTKKYIY 329

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y       +      S  + +  +++  AI    EL +  L  A   +  +      AF 
Sbjct: 330 YVCSTNKHSRTCSPHSIAAKEVEEKVFRAIHDQIELVIN-LEHALAMIERLPSQSRKAFN 388

Query: 256 PVSITESVLKHAQN 269
             +    + +  + 
Sbjct: 389 YEAQIAKIEEEIER 402


>gi|260786803|ref|XP_002588446.1| hypothetical protein BRAFLDRAFT_198828 [Branchiostoma floridae]
 gi|229273608|gb|EEN44457.1| hypothetical protein BRAFLDRAFT_198828 [Branchiostoma floridae]
          Length = 167

 Score = 38.5 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 26/112 (23%), Gaps = 3/112 (2%)

Query: 20  DSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNP-ITRDMRLQ 78
                 + L                  R ++   Y     L  V D    P  T+   L 
Sbjct: 35  SMRTCYQYLNQTSRSFAAVTQALDGDLRDAVCIFYLVLRALDTVEDDMTIPLDTKLDMLH 94

Query: 79  WWKDIFESSTK--GLIAESISPFSVELLSIVRQYDLPNQYFLDMIEAHFFDS 128
            +    +          E       +  +I +++      + ++I       
Sbjct: 95  SFHTYLQDPAWRFMESNEKDKKVLEDFPTISQEFRKLKPLYQEVISDICRRM 146


>gi|257440097|ref|ZP_05615852.1| putative TnpX site-specific recombinase [Faecalibacterium
           prausnitzii A2-165]
 gi|257197449|gb|EEU95733.1| putative TnpX site-specific recombinase [Faecalibacterium
           prausnitzii A2-165]
          Length = 544

 Score = 38.1 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 39/134 (29%), Gaps = 1/134 (0%)

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            +    Y   ++ +++    M    ++  A L              +   +P    +   
Sbjct: 291 HEALVSYEDFMAVKVMMQRDMRCSPDQDEAHLFSGFLFCGDCQQPMIRKTVPSKTKKYIY 350

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y       +      S  + +  +++  AI    EL +  L  A   +  +      AF 
Sbjct: 351 YVCSTNKHSRTCSPHSIAAKEVEEKVFRAIHDQIELVIN-LEHALAMIERLPSQSRKAFN 409

Query: 256 PVSITESVLKHAQN 269
             +    + +  + 
Sbjct: 410 YEAQIAKIEEEIER 423


>gi|295101299|emb|CBK98844.1| Site-specific recombinases, DNA invertase Pin homologs
           [Faecalibacterium prausnitzii L2-6]
          Length = 544

 Score = 38.1 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 39/134 (29%), Gaps = 1/134 (0%)

Query: 136 CKQFEHYAFRISSRLIHLATMILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQL 195
            +    Y   ++ +++    M    ++  A L              +   +P    +   
Sbjct: 291 HEALVSYEDFMAVKVMMQRDMRCSPDQDEAHLFSGFLFCGDCQQPMIRKTVPSKTKKYIY 350

Query: 196 YFPLDILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFI 255
           Y       +      S  + +  +++  AI    EL +  L  A   +  +      AF 
Sbjct: 351 YVCSTNKHSRTCSPHSIAAKEVEEKVFRAIHDQIELVIN-LEHALAMIERLPSQSRKAFN 409

Query: 256 PVSITESVLKHAQN 269
             +    + +  + 
Sbjct: 410 YEAQIAKIEEEIER 423


>gi|255281089|ref|ZP_05345644.1| site-specific recombinase, phage integrase family [Bryantella
           formatexigens DSM 14469]
 gi|255268537|gb|EET61742.1| site-specific recombinase, phage integrase family [Bryantella
           formatexigens DSM 14469]
          Length = 291

 Score = 38.1 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 6/165 (3%)

Query: 107 VRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSAS 166
           VR+Y    + F    E          +   KQ+    + +SS    LA +    + Y   
Sbjct: 38  VRKYMHDLKAFQQYAE-KKQPVTKQVVIVYKQYLMEHYAVSSVNSILAALNGFFKEYGWY 96

Query: 167 LRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
             + +   +                 G                   +    S  I   + 
Sbjct: 97  DCMTRSLRV--QRNSFRRSDKELTKEGYYRLVKMAEKRGNTRLSLIMQTICSTGIR--VS 152

Query: 227 IFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHG 271
               + ++ L+  R  +  +        +P  +   +LK+ + H 
Sbjct: 153 ELEFITVEALYSGRA-IVSLKGKTRAVLLPAELCRKLLKYVRAHN 196


>gi|224057064|ref|XP_002299120.1| predicted protein [Populus trichocarpa]
 gi|222846378|gb|EEE83925.1| predicted protein [Populus trichocarpa]
          Length = 104

 Score = 38.1 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 25/95 (26%), Gaps = 10/95 (10%)

Query: 142 YAFRISSRLIHLATMILDSERY------SASLRVIKYAGIAQFIGQLICQL----PIHYH 191
           Y +  +     +   +             +      +  IA      + ++         
Sbjct: 4   YCYYDAGTTGSMTVPVTGIAPESSSVSVQSIYNAAVHFCIANQFTDTLIEMCGKSKFLSL 63

Query: 192 RGQLYFPLDILGAVGLDRESFLSGQNSDRISLAIK 226
              L  P D L   GL  E   S + +D     +K
Sbjct: 64  IYLLMLPQDELERFGLCDEDVFSIKVTDNWREFMK 98


>gi|32349440|gb|AAP56021.1| phytoene synthase [Zea mays]
 gi|32349502|gb|AAP56052.1| phytoene synthase [Zea mays]
 gi|32349506|gb|AAP56054.1| phytoene synthase [Zea mays]
 gi|32349510|gb|AAP56056.1| phytoene synthase [Zea mays]
 gi|32349512|gb|AAP56057.1| phytoene synthase [Zea mays]
 gi|32349528|gb|AAP56065.1| phytoene synthase [Zea mays]
          Length = 55

 Score = 38.1 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 12/58 (20%), Gaps = 3/58 (5%)

Query: 58  TELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQ 115
                + D           L  W+   E                 L   + ++ +  Q
Sbjct: 1   RRTDELVDGPNANYITPTALDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQ 55


>gi|220673403|emb|CAX13361.1| novel protein similar to vertebrate farnesyl-diphosphate
           farnesyltransferase 1 (FDFT1) [Danio rerio]
          Length = 179

 Score = 37.7 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 17/83 (20%), Gaps = 1/83 (1%)

Query: 14  EKIFSRDSLFVLRNLRDIDYDRYLACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITR 73
           +   S         L                  R ++   Y     L  V D    P+ +
Sbjct: 62  QDSMSDTLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSIPLEQ 121

Query: 74  DM-RLQWWKDIFESSTKGLIAES 95
            +  LQ +               
Sbjct: 122 KLPLLQDFHTFLYQPEWSFSQSR 144


>gi|167586929|ref|ZP_02379317.1| Squalene/phytoene synthase [Burkholderia ubonensis Bu]
          Length = 53

 Score = 37.4 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 2/32 (6%), Positives = 13/32 (40%)

Query: 266 HAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKK 297
             +  G++++        + + W    ++ ++
Sbjct: 22  EIERDGYQVLHQRIALTPIRKLWIAWRAARRR 53


>gi|313509734|gb|ADR66115.1| squalene synthase [Artemisia campestris]
          Length = 106

 Score = 37.4 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 7/101 (6%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 110 YDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSERYSA--SL 167
           Y    +  +  +         D +     ++ Y+  ++  +    + +  +         
Sbjct: 1   YQKVIEDTVMKMGVGMAKFIRDEVDTINDYDEYSHYVAGLVGIGLSKLFHASGKEISLPD 60

Query: 168 RVIKYAGIAQFIGQLICQLPIHYH---RGQLYFPLDILGAV 205
            +    G+      +I       +   +  +++P +I    
Sbjct: 61  PISNSMGLFLQKANIIRDFHEDINEVPKPLIFWPREIWSKY 101


>gi|159467104|ref|XP_001691738.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279084|gb|EDP04846.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 486

 Score = 37.0 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 235 YLFKAREEMRYILP--DVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLS 292
           +L      +  +      FPA     +   VL+  ++  F+          L + W    
Sbjct: 130 HLNTVSRLINQLPGGEASFPAVRRAVVAALVLRRLRHGAFRPPQERTVQRLLQQLWTRHR 189

Query: 293 SSIKKR 298
           ++ +++
Sbjct: 190 AAAREK 195


>gi|254672344|emb|CBA05532.1| putative phytoene synthase [Neisseria meningitidis alpha275]
          Length = 71

 Score = 37.0 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 5/69 (7%), Positives = 20/69 (28%), Gaps = 1/69 (1%)

Query: 229 AELGLKYLFKAREEMRYILPDVFPAFIPVSI-TESVLKHAQNHGFKIVSHSHTPNQLVRP 287
           A    + L       R +   +      + +  + +L+      + + +     ++    
Sbjct: 3   AGAAFRMLKAGSPLARELKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWL 62

Query: 288 WYMLSSSIK 296
             +  +  K
Sbjct: 63  IMLKRALWK 71


>gi|88603584|ref|YP_503762.1| methionine aminopeptidase [Methanospirillum hungatei JF-1]
 gi|88189046|gb|ABD42043.1| methionine aminopeptidase, type II [Methanospirillum hungatei JF-1]
          Length = 291

 Score = 37.0 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/195 (10%), Positives = 46/195 (23%), Gaps = 24/195 (12%)

Query: 98  PFSVELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRL--IHLAT 155
           P ++ L                  +                 + Y    +  +       
Sbjct: 54  PVNISLNEAAAHDTPSPDDTRTFAKGDMVKLDLGVH-----LDGYIADTACTVDLGDQPL 108

Query: 156 MILDSERYSASLRVIKYAGIAQFIGQLICQLPIHYHRGQLYFPLDILGAVGLDRESFLSG 215
           +   S     +       G+A      I     H  + + + P+  L   GLD+     G
Sbjct: 109 LCEASIAARDAAIAAVRPGVAIGTLGTIVA---HEIKSRGFLPVANLTGHGLDQYCLHKG 165

Query: 216 QNSDRIS----LAIKIFAELGLKYLFKAREEMRYILPD--------VFPAFIPVSITESV 263
            N   I       ++    L ++          +              P  +P +    +
Sbjct: 166 PNVPNIPGSGGAVLEEGMVLAIEPFASTGTGFVHDGRREEIFSQQIRRPVRLPAA--RKI 223

Query: 264 LKHAQNHGFKIVSHS 278
           L+  ++      +  
Sbjct: 224 LQEIESRNGMPFARR 238


>gi|242214198|ref|XP_002472923.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727966|gb|EED81870.1| predicted protein [Postia placenta Mad-698-R]
          Length = 667

 Score = 37.0 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/229 (9%), Positives = 59/229 (25%), Gaps = 22/229 (9%)

Query: 43  PPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVE 102
           PP +      ++ F   L  V+  A +P  R   L   +    ++ +     +       
Sbjct: 160 PPEHTKHSLAIWLFWLRLDDVKLDALSPDVRKQLLDAIRCYAHTALRYPSFFAPDNHFKF 219

Query: 103 ------LLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATM 156
                 L + ++    P+ ++    +               +         ++L+++   
Sbjct: 220 PLSADVLTATLKTRMTPHGHWPQYRDPSQVIEKVTHYSRRLELCAPILGHGAKLLYMTLD 279

Query: 157 ILDSERYSASLRVIKYAGIAQFIGQLICQLP----IHYHRGQLYFPLDILGAVGLDRESF 212
            L  +   +  R  ++A +A     +          + HR                    
Sbjct: 280 ELPYQIPPSLARDREHA-LALGWSDVRATQADFLEANAHRSVKLLAQSDWDWHSKLTPEQ 338

Query: 213 LSGQNSDRIS-----------LAIKIFAELGLKYLFKAREEMRYILPDV 250
              ++                      A  G  +  +  + + Y+   +
Sbjct: 339 ARLEDDAAWRKGLHAKSALLDELWNRLAFCGDPWADQVLKGVVYMPGSL 387


>gi|256273228|gb|EEU08174.1| Tra1p [Saccharomyces cerevisiae JAY291]
          Length = 3744

 Score = 37.0 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 10/129 (7%)

Query: 37   LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
             +  L  P  R        F+       D   +  T   RL++W+   E+       +  
Sbjct: 3283 FSTTLLAPYIRPK------FN---ADFIDNKPDYETYIKRLRYWRRRLENKLDRASKKEN 3333

Query: 97   SPFSV-ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
                   L +   Q     +     +     + +   I        +     S    L  
Sbjct: 3334 LEVLCPHLSNFHHQKFEDIEIPGQYLLNKDNNVHFIKIARFLPTVDFVRGTHSSYRRLMI 3393

Query: 156  MILDSERYS 164
               D   +S
Sbjct: 3394 RGHDGSVHS 3402


>gi|151944045|gb|EDN62338.1| NuA4 histone acetyltransferase subunit [Saccharomyces cerevisiae
            YJM789]
          Length = 3744

 Score = 37.0 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 10/129 (7%)

Query: 37   LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
             +  L  P  R        F+       D   +  T   RL++W+   E+       +  
Sbjct: 3283 FSTTLLAPYIRPK------FN---ADFIDNKPDYETYIKRLRYWRRRLENKLDRASKKEN 3333

Query: 97   SPFSV-ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
                   L +   Q     +     +     + +   I        +     S    L  
Sbjct: 3334 LEVLCPHLSNFHHQKFEDIEIPGQYLLNKDNNVHFIKIARFLPTVDFVRGTHSSYRRLMI 3393

Query: 156  MILDSERYS 164
               D   +S
Sbjct: 3394 RGHDGSVHS 3402


>gi|6321891|ref|NP_011967.1| Tra1p [Saccharomyces cerevisiae S288c]
 gi|731689|sp|P38811|TRA1_YEAST RecName: Full=Transcription-associated protein 1; AltName: Full=p400
            kDa component of SAGA
 gi|487929|gb|AAB68923.1| Tra1p [Saccharomyces cerevisiae]
 gi|285810006|tpg|DAA06793.1| TPA: Tra1p [Saccharomyces cerevisiae S288c]
          Length = 3744

 Score = 37.0 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 10/129 (7%)

Query: 37   LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
             +  L  P  R        F+       D   +  T   RL++W+   E+       +  
Sbjct: 3283 FSTTLLAPYIRPK------FN---ADFIDNKPDYETYIKRLRYWRRRLENKLDRASKKEN 3333

Query: 97   SPFSV-ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
                   L +   Q     +     +     + +   I        +     S    L  
Sbjct: 3334 LEVLCPHLSNFHHQKFEDIEIPGQYLLNKDNNVHFIKIARFLPTVDFVRGTHSSYRRLMI 3393

Query: 156  MILDSERYS 164
               D   +S
Sbjct: 3394 RGHDGSVHS 3402


>gi|259146852|emb|CAY80108.1| Tra1p [Saccharomyces cerevisiae EC1118]
          Length = 3744

 Score = 37.0 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 10/129 (7%)

Query: 37   LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
             +  L  P  R        F+       D   +  T   RL++W+   E+       +  
Sbjct: 3283 FSTTLLAPYIRPK------FN---ADFIDNKPDYETYIKRLRYWRRRLENKLDRASKKEN 3333

Query: 97   SPFSV-ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
                   L +   Q     +     +     + +   I        +     S    L  
Sbjct: 3334 LEVLCPHLSNFHHQKFEDIEIPGQYLLNKDNNVHFIKIARFLPTVDFVRGTHSSYRRLMI 3393

Query: 156  MILDSERYS 164
               D   +S
Sbjct: 3394 RGHDGSVHS 3402


>gi|313214757|emb|CBY41027.1| unnamed protein product [Oikopleura dioica]
          Length = 74

 Score = 37.0 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 23/70 (32%)

Query: 230 ELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWY 289
            +    L K +     I       F  ++  E+ LK+ Q   F +   S +         
Sbjct: 5   AVAHANLTKIQSMRSKIPDQAHDIFRQLTGAETYLKNLQAKNFNLFDPSLSVRNDFLALQ 64

Query: 290 MLSSSIKKRF 299
           +    +K+ F
Sbjct: 65  IFKKKMKREF 74


>gi|262199345|ref|YP_003270554.1| hypothetical protein Hoch_6186 [Haliangium ochraceum DSM 14365]
 gi|262082692|gb|ACY18661.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365]
          Length = 2910

 Score = 37.0 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/147 (8%), Positives = 29/147 (19%), Gaps = 15/147 (10%)

Query: 162  RYSASLRVIKYAGIAQFIGQLICQLPIHYH--RGQLYFPLDILGAVGLDRESFLSGQNSD 219
               A  R  +     +                R       +   A  L R    +   +D
Sbjct: 2249 YRDALEREAEAYRCFKQAHSAAPDDGEIAGELRRLAMARGEWAIAAELLRREIAAAPTTD 2308

Query: 220  RISLAIKIFA----------ELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQN 269
                     A          E   ++  +A      +     P      +       A  
Sbjct: 2309 AAGALEMELAVLYDEHLLDAERARQHYERALALAPALPGAPRPLARLYELAGRHADAAHM 2368

Query: 270  HGFKIVSHSHTPNQLVRPWYMLSSSIK 296
            +           +   R   +  +++ 
Sbjct: 2369 NEMAAAHAR---DDFQRSRLLYRAAVS 2392


>gi|32349438|gb|AAP56020.1| phytoene synthase [Zea mays]
 gi|32349542|gb|AAP56072.1| phytoene synthase [Zea mays]
          Length = 53

 Score = 36.2 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 6/56 (10%), Positives = 12/56 (21%), Gaps = 3/56 (5%)

Query: 60  LMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQ 115
              + D           L  W+   E                 L   + ++ +  Q
Sbjct: 1   TDELVDGPNANYITPTALDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQ 53


>gi|32349442|gb|AAP56022.1| phytoene synthase [Zea mays]
 gi|32349494|gb|AAP56048.1| phytoene synthase [Zea mays]
 gi|32349532|gb|AAP56067.1| phytoene synthase [Zea mays]
 gi|32349538|gb|AAP56070.1| phytoene synthase [Zea mays]
 gi|32349548|gb|AAP56075.1| phytoene synthase [Zea mays]
          Length = 54

 Score = 36.2 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 6/57 (10%), Positives = 12/57 (21%), Gaps = 3/57 (5%)

Query: 59  ELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSVELLSIVRQYDLPNQ 115
               + D           L  W+   E                 L   + ++ +  Q
Sbjct: 1   RTDELVDGPNANYITPTALDRWEKRLEDLF---TGRPYDMLDAALSDTISRFPIDIQ 54


>gi|110825988|ref|NP_005637.3| probable methyltransferase TARBP1 [Homo sapiens]
 gi|74739787|sp|Q13395|TARB1_HUMAN RecName: Full=Probable methyltransferase TARBP1; AltName: Full=TAR
           RNA-binding protein 1; AltName: Full=TAR RNA-binding
           protein of 185 kDa; Short=TRP-185
 gi|1184692|gb|AAC50379.1| TAR RNA loop binding protein [Homo sapiens]
 gi|56204383|emb|CAI22828.1| TAR (HIV-1) RNA binding protein 1 [Homo sapiens]
 gi|56205978|emb|CAI22931.1| TAR (HIV-1) RNA binding protein 1 [Homo sapiens]
 gi|119590399|gb|EAW69993.1| Tar (HIV-1) RNA binding protein 1 [Homo sapiens]
 gi|162318782|gb|AAI56250.1| TAR (HIV-1) RNA binding protein 1 [synthetic construct]
 gi|1586092|prf||2203267A TRP-185 protein
          Length = 1621

 Score = 36.2 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 6/85 (7%), Positives = 19/85 (22%), Gaps = 2/85 (2%)

Query: 212 FLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPAFIPVSITESVLKHAQNHG 271
              G+ S      ++   +       +       +                +L+  +   
Sbjct: 23  LCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEAAREV--AAGYLVPLLRSLRGRP 80

Query: 272 FKIVSHSHTPNQLVRPWYMLSSSIK 296
                 S  P    R      ++++
Sbjct: 81  AGGPDPSLQPRHRRRVLRAAGAALR 105


>gi|108758541|ref|YP_631556.1| transglutaminase-like domain-containing protein [Myxococcus xanthus
           DK 1622]
 gi|108462421|gb|ABF87606.1| transglutaminase-like superfamily domain protein [Myxococcus
           xanthus DK 1622]
          Length = 698

 Score = 36.2 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 75/291 (25%), Gaps = 38/291 (13%)

Query: 42  SPPLYRISLSFL-YYFHTE----LMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
            PP  + +L  L             RV +  R+P+    +L  W     S T  L  +  
Sbjct: 372 LPPEEQDALLSLPEGLDVRVGQTAARVLNGERDPLAAARKLSAWLQREYSYTLELSGDVP 431

Query: 97  SPFSVELLSIVRQYDLPNQYFLDMI---EAHFFDSYNDSIFDCKQF--EHYAFRISSRLI 151
            P +  L    + +       L ++   +              +           +    
Sbjct: 432 DPVADFLFQRKQGHCEHFATALTLMLRTQGMRARLATGFFGGERVTGGYVVRAGDAHAWT 491

Query: 152 HLATMILDSERYSASLRVIKY---AGIAQFIGQL-------ICQLPIHYH-RGQLYFPLD 200
           H+           A+    +      + + +             + + Y+ R QL     
Sbjct: 492 HVLVPGRGFITVDATPPAHRASQSPRLLEQLINFYEIVESQWRDVVLDYNFRDQLTVVRS 551

Query: 201 ILGAVGLDRESFLSGQNSDRISLAIKIFAELGLKYLFKAREEMRYILPDVFPA------- 253
           +  +  + ++   + +       A               R   +++  +  P        
Sbjct: 552 LTRSHEVPKKDEPASRAPPP--RAFGAALLAAAAAYTAWRLLTQFLSRE-RPLEATRFVD 608

Query: 254 -----FIPVSITESVLKHAQNHGFKIVSHSHTPNQLVRPWYMLSSSIKKRF 299
                     IT    +  +    ++    H  +  + P  +    ++ RF
Sbjct: 609 AVEAQLASARITRVDGETLEALDARLARERHPLSPALTP--VTRRYLEARF 657


>gi|186681813|ref|YP_001865009.1| ATP-dependent metalloprotease FtsH [Nostoc punctiforme PCC 73102]
 gi|186464265|gb|ACC80066.1| ATP-dependent metalloprotease FtsH [Nostoc punctiforme PCC 73102]
          Length = 628

 Score = 35.8 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/203 (6%), Positives = 46/203 (22%), Gaps = 27/203 (13%)

Query: 42  SPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFSV 101
                R     L     E+    D     +     +        +               
Sbjct: 392 LTARRRKEAITL----REIDDAVDRVVAGMEGTPLVDSKSKRLIAY---------HEIGH 438

Query: 102 ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLATMILDSE 161
            L+  + +   P Q    +           +  + +     +   +     L     +  
Sbjct: 439 ALVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNEEQGLISRSQLKARITGALGGRAAEEV 498

Query: 162 RYSASLRVIKYAGIAQFIGQLICQL------------PIHYHRGQLYFPLDILGAVGLDR 209
            + A+       G  Q +  +  Q+             +   +G+++   D         
Sbjct: 499 IFGAAEVTTGAGGDLQQLSGMARQMVTRFGMSDLGPLSLESQQGEVFLGRDWTTRSEYSE 558

Query: 210 ESFLSGQNSDRISLAIKIFAELG 232
              ++ +   ++   ++   +  
Sbjct: 559 S--IASRIDGQVRAIVEECYDNA 579


>gi|285018685|ref|YP_003376396.1| hypothetical protein XALc_1917 [Xanthomonas albilineans GPE PC73]
 gi|283473903|emb|CBA16404.1| hypothetical protein XALc_1917 [Xanthomonas albilineans]
          Length = 234

 Score = 35.8 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 3/63 (4%)

Query: 41  LSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESISPFS 100
             P   R      +    E   + + A +P+  D +L WW +   S        S  P  
Sbjct: 27  FVPAPQRARTVAWFALLQEFDDILNIAGDPLPADAKLAWWGEELRSWA---GRRSRHPLG 83

Query: 101 VEL 103
             L
Sbjct: 84  RVL 86


>gi|207344625|gb|EDZ71710.1| YHR099Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 542

 Score = 35.8 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 10/129 (7%)

Query: 37  LACLLSPPLYRISLSFLYYFHTELMRVRDTARNPITRDMRLQWWKDIFESSTKGLIAESI 96
            +  L  P  R        F+       D   +  T   RL++W+   E+       +  
Sbjct: 81  FSTTLLAPYIRPK------FN---ADFIDNKPDYETYIKRLRYWRRRLENKLDRASKKEN 131

Query: 97  SPFSV-ELLSIVRQYDLPNQYFLDMIEAHFFDSYNDSIFDCKQFEHYAFRISSRLIHLAT 155
                  L +   Q     +     +     + +   I        +     S    L  
Sbjct: 132 LEVLCPHLSNFHHQKFEDIEIPGQYLLNKDNNVHFIKIARFLPTVDFVRGTHSSYRRLMI 191

Query: 156 MILDSERYS 164
              D   +S
Sbjct: 192 RGHDGSVHS 200


>gi|238751675|ref|ZP_04613164.1| hypothetical protein yrohd0001_18020 [Yersinia rohdei ATCC 43380]
 gi|238710085|gb|EEQ02314.1| hypothetical protein yrohd0001_18020 [Yersinia rohdei ATCC 43380]
          Length = 1123

 Score = 35.4 bits (80), Expect = 9.1,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 60/208 (28%), Gaps = 23/208 (11%)

Query: 98  PFSVELLSIVRQYDLPNQYFLDMIEA-----HFFDSYNDSIFDCKQFEHYAFRISSRLIH 152
           P SV     V+ +   +  +  +I++         +        K        +      
Sbjct: 312 PVSVNAKRSVQHHWGKDNRWDVLIDSLPSLPTGLAATKLGFAWRKMLAMAVAGMMVLWGA 371

Query: 153 --LATMILDSERYSASLRVIKYAGIAQF------IGQLICQLPIHYHRGQLYFPLDILGA 204
             L + +++ + ++ S   +K A   Q         QL  Q  +   + +          
Sbjct: 372 GMLMSFLVNRDTFNTSESQVKLAANVQQPLTARLQAQLSLQHTLDRLQYRQQQGAPWYSR 431

Query: 205 VGLDRESFLSGQNSDRISL-AIKIFAELGLKYLFKAREEMRYILPDV-------FPAFIP 256
            GL++   L           A  +  +   ++L +    M  + PD         PA+  
Sbjct: 432 FGLNQNDPLLAALWPHYRASATPLLRDAAARHLEEQLSTMAQLPPDSPLRDTLVKPAYDQ 491

Query: 257 VSITESVLKHAQNHGFKIVSHSHTPNQL 284
           + +    L   +       S +   +  
Sbjct: 492 LKLYLM-LARPEKMDAAWFSKTL-LSDW 517


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.313    0.133    0.349 

Lambda     K      H
   0.267   0.0407    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,285,953,890
Number of Sequences: 13984884
Number of extensions: 109581810
Number of successful extensions: 467523
Number of sequences better than 10.0: 2714
Number of HSP's better than 10.0 without gapping: 2216
Number of HSP's successfully gapped in prelim test: 498
Number of HSP's that attempted gapping in prelim test: 459365
Number of HSP's gapped (non-prelim): 3649
length of query: 299
length of database: 4,792,584,752
effective HSP length: 138
effective length of query: 161
effective length of database: 2,862,670,760
effective search space: 460889992360
effective search space used: 460889992360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.0 bits)
S2: 80 (35.4 bits)