RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780162|ref|YP_003064575.1| hypothetical protein CLIBASIA_00225 [Candidatus Liberibacter asiaticus str. psy62] (36 letters) >gnl|CDD|183024 PRK11187, PRK11187, replication initiation regulator SeqA; Provisional. Length = 182 Score = 24.8 bits (55), Expect = 5.2 Identities = 7/20 (35%), Positives = 12/20 (60%) Query: 17 VEKSVLEDEFSNQPGSVGCF 36 V + +L DE++ Q +V F Sbjct: 73 VRELLLSDEYAEQKKAVNRF 92 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.327 0.137 0.409 Gapped Lambda K H 0.267 0.0796 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 516,790 Number of extensions: 13196 Number of successful extensions: 26 Number of sequences better than 10.0: 1 Number of HSP's gapped: 26 Number of HSP's successfully gapped: 3 Length of query: 36 Length of database: 5,994,473 Length adjustment: 10 Effective length of query: 26 Effective length of database: 5,778,393 Effective search space: 150238218 Effective search space used: 150238218 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 50 (22.9 bits)