HHsearch alignment for GI: 254780163 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=97.76 E-value=0.00096 Score=46.05 Aligned_cols=211 Identities=17% Similarity=0.314 Sum_probs=113.6
Q ss_pred HHHHHHHCHH-HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH---HCCCC--EEEEEHHHHHCCC
Q ss_conf 0246653458-9999999998775204456578740688614320038899999873---04773--3772068861246
Q gi|254780163|r 474 NLGTVVYGQE-EAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAF---ALGVQ--LLRFDMSEYMERH 547 (798)
Q Consensus 474 ~l~~~v~GQ~-~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~---~~~~~--lir~dmsey~e~~ 547 (798)
T Consensus 85 tFdnFv~g~~N~~A~aa~~~va~------~~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~ 158 (408)
T COG0593 85 TFDNFVVGPSNRLAYAAAKAVAE------NPGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDF 158 (408)
T ss_pred CHHHEEECCCHHHHHHHHHHHHH------CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
T ss_conf 55422047744999999999875------668868957998799997899999999999862998648850489989999
Q ss_pred CCCHHCCCCCHHCCCCCCCCCCHHHHHC-CCEEEEECCHHHC------CHHHHHHHHHHHHHHHCCCCCCCEECCCCEEE
Q ss_conf 5301104780002564443100355515-8517774044550------28999999998777502177997761254299
Q gi|254780163|r 548 AVSRLIGAPPGYVGFGQGGILADSVDQN-PYSVVLLDEIEKS------HPDVLNILLQIMDYGILTDQSGKKISFRNVIL 620 (798)
Q Consensus 548 ~vs~LiGappGYvG~~egg~Lte~vr~~-P~sVvl~DEiEKA------h~~v~~~llqild~G~ltd~~Gr~vdf~n~ii 620 (798)
T Consensus 159 v~a-~~----------~-~~-~~~Fk~~y~~dlllIDDiq~l~gk~~~qeefFh~FN~l~~~~k--------------qI 211 (408)
T COG0593 159 VKA-LR----------D-NE-MEKFKEKYSLDLLLIDDIQFLAGKERTQEEFFHTFNALLENGK--------------QI 211 (408)
T ss_pred HHH-HH----------H-HH-HHHHHHHHCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCC--------------EE
T ss_conf 999-88----------5-04-8888876426735551386756771579999999998885088--------------79
Q ss_pred EEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 99424214553303689882111488999998728878817768289628899999999999999999999986698899
Q gi|254780163|r 621 IMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQVVHKFIMKLELQLQEKGISFH 700 (798)
Q Consensus 621 i~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~ 700 (798)
T Consensus 212 vltsdr~P~~-------------l~~~~~rL~SR~~~------Gl~~~I~~Pd~e~r~aiL~k-------ka~~~~--~~ 263 (408)
T COG0593 212 VLTSDRPPKE-------------LNGLEDRLRSRLEW------GLVVEIEPPDDETRLAILRK-------KAEDRG--IE 263 (408)
T ss_pred EEECCCCCHH-------------HCCCCHHHHHHHHC------EEEEEECCCCHHHHHHHHHH-------HHHHCC--CC
T ss_conf 9970788322-------------11035889989863------05775279888999999999-------998658--88
Q ss_pred ECHHHHHHHHHCCCCCCCCCHHHHHHHHH----------HHHHHHHHHHHCCCCCCCC
Q ss_conf 98899999997189810153267999998----------6235999999629676888
Q gi|254780163|r 701 FSEEVINWLVSHGYDVKMGARPLERIIKE----------HVKVPLADEILFGKLKKGG 748 (798)
Q Consensus 701 ~~~~~~~~l~~~~~~~~~GAR~l~r~i~~----------~i~~~la~~il~~~~~~g~ 748 (798)
T Consensus 264 i~~ev~~~la~~~~~n---vReLegaL~~l~~~a~~~~~~iTi~~v~e~L~~~~~~~~ 318 (408)
T COG0593 264 IPDEVLEFLAKRLDRN---VRELEGALNRLDAFALFTKRAITIDLVKEILKDLLRAGE 318 (408)
T ss_pred CCHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 8879999999970030---999999999999999853875769999999998640145