HHsearch alignment for GI: 254780163 and conserved domain: COG0606
>COG0606 Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].
Probab=98.89 E-value=3.7e-08 Score=77.77 Aligned_cols=225 Identities=24% Similarity=0.263 Sum_probs=124.4
Q ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH---------CCCCEEEEEHH------
Q ss_conf 665345899999999987752044565787406886143200388999998730---------47733772068------
Q gi|254780163|r 477 TVVYGQEEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFA---------LGVQLLRFDMS------ 541 (798)
Q Consensus 477 ~~v~GQ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~---------~~~~lir~dms------ 541 (798)
T Consensus 179 ~DV~GQ~~AKrAlei----AAAGgH-------nLl~~GpPGtGKTmla~Rl~~lLPpls~~E~lE~s~I~s~~~~~~~~~ 247 (490)
T COG0606 179 KDVKGQEQAKRALEI----AAAGGH-------NLLLVGPPGTGKTMLASRLPGLLPPLSIPEALEVSAIHSLAGDLHEGC 247 (490)
T ss_pred HHHCCCHHHHHHHHH----HHHCCC-------CEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 664384999999999----984388-------678756998865676423102599987088899988876354324678
Q ss_pred ------HHHCCC-CC--CHHCCCCCHHCCCCCCCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCC--CCC
Q ss_conf ------861246-53--0110478000256444310035551585177740445502899999999877750217--799
Q gi|254780163|r 542 ------EYMERH-AV--SRLIGAPPGYVGFGQGGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTD--QSG 610 (798)
Q Consensus 542 ------ey~e~~-~v--s~LiGappGYvG~~egg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd--~~G 610 (798)
T Consensus 248 ~~~~~rPFr~PHHsaS~~aLvG---GG-~~p~PGe----IsLAH~GVLFLDElpef~~~iLe~LR~PLE~g~i~IsRa~~ 319 (490)
T COG0606 248 PLKIHRPFRAPHHSASLAALVG---GG-GVPRPGE----ISLAHNGVLFLDELPEFKRSILEALREPLENGKIIISRAGS 319 (490)
T ss_pred CCCEECCCCCCCCCCHHHHHHC---CC-CCCCCCC----EEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 6411078768874022889737---89-9889873----54303877886144210599999973741258179997587
Q ss_pred CEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCH-----HHHHHHHHHHCCHHHHCCCCEEEECCCCCHHHHHH------
Q ss_conf 7761254299994242145533036898821114-----88999998728878817768289628899999999------
Q gi|254780163|r 611 KKISFRNVILIMTTNAGALEMSKARIGFGSSRND-----DADKEALRNFLSPEFLNRLDSIIPFFPLSSDIIRQ------ 679 (798)
Q Consensus 611 r~vdf~n~iii~TsN~G~~~~~~~~~g~~~~~~~-----~~~~~~l~~~f~peflnRid~ii~F~~l~~~~~~~------ 679 (798)
T Consensus 320 ~v~ypa~Fqlv~AmNpc-------pcG~~~~~~~~C~c~~~~~~~Y~~klSgp~lDRiDl~vev~~~~~~e~~~~~~~~e 392 (490)
T COG0606 320 KVTYPARFQLVAAMNPC-------PCGNLGAPLRRCPCSPRQIKRYLNKLSGPFLDRIDLMVEVPRLSAGELIRQVPTGE 392 (490)
T ss_pred EEEEEEEEEEHHHCCCC-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCC
T ss_conf 16872126775223999-------76478887777578878877889874378775524110046789787614789898
Q ss_pred ----HHHHHHHHHHHHHHH-CC--CEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf ----999999999999986-69--8899988999999971898101532679999986
Q gi|254780163|r 680 ----VVHKFIMKLELQLQE-KG--ISFHFSEEVINWLVSHGYDVKMGARPLERIIKEH 730 (798)
Q Consensus 680 ----i~~~~l~~l~~~l~~-~~--i~l~~~~~~~~~l~~~~~~~~~GAR~l~r~i~~~ 730 (798)
T Consensus 393 ss~~v~~rVa~AR~~Q~~R~~~~~~Na~l~~~~l~k---~~~L~~~~~~~L~~al~~~ 447 (490)
T COG0606 393 SSAGVRERVAKAREAQIARAGRIGINAELSEEALRK---FCALQREDADLLKAALERL 447 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHH---HCCCCHHHHHHHHHHHHHC
T ss_conf 758899999999999999853568542128999997---6265776799999999966